16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148652.peg.809
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.148652.peg.810
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148652.peg.691
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.148652.peg.811
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.148652.peg.98
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148652.peg.913
5-FCL-like_protein	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148652.peg.373
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148652.peg.1527
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148652.peg.1281
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148652.peg.1310
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148652.peg.1789
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148652.peg.1793
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148652.peg.341
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148652.peg.687
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148652.peg.1461
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148652.peg.845
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148652.peg.127
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148652.peg.438
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148652.peg.205
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148652.peg.97
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148652.peg.434
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148652.peg.1094
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148652.peg.1128
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148652.peg.1330
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148652.peg.1462
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148652.peg.1547
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148652.peg.1566
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148652.peg.1940
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148652.peg.517
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148652.peg.303
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.148652.peg.1664
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148652.peg.19
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148652.peg.425
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148652.peg.369
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148652.peg.370
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148652.peg.369
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148652.peg.383
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148652.peg.374
Acetyl-CoA_fermentation_to_Butyrate	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148652.peg.373
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148652.peg.371
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148652.peg.530
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148652.peg.372
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148652.peg.531
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148652.peg.757
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148652.peg.566
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148652.peg.728
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148652.peg.757
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.148652.peg.965
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.148652.peg.964
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatC	fig|6666666.148652.peg.963
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatD	fig|6666666.148652.peg.962
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatE	fig|6666666.148652.peg.961
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.148652.peg.968
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.148652.peg.967
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.148652.peg.353
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148652.peg.1071
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148652.peg.1738
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148652.peg.1136
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.148652.peg.390
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148652.peg.908
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148652.peg.1008
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148652.peg.212
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148652.peg.887
Anaerobic_respiratory_reductases	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148652.peg.373
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148652.peg.538
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148652.peg.787
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148652.peg.538
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148652.peg.787
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148652.peg.538
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148652.peg.787
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148652.peg.1368
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148652.peg.1368
Arginine_and_Ornithine_Degradation	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148652.peg.31
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148652.peg.1368
Arginine_and_Ornithine_Degradation	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148652.peg.814
Arginine_and_Ornithine_Degradation	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148652.peg.32
Arginine_and_Ornithine_Degradation	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148652.peg.816
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.148652.peg.907
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148652.peg.1899
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148652.peg.1898
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148652.peg.758
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148652.peg.499
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.148652.peg.801
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148652.peg.527
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148652.peg.850
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148652.peg.940
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148652.peg.809
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.148652.peg.117
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.148652.peg.810
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.148652.peg.802
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.148652.peg.805
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.148652.peg.464
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148652.peg.800
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.148652.peg.853
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.148652.peg.1162
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148652.peg.33
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148652.peg.649
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.148652.peg.823
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.148652.peg.688
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.148652.peg.689
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.148652.peg.690
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.148652.peg.2040
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.148652.peg.1037
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148652.peg.24
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.148652.peg.811
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148652.peg.499
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.148652.peg.801
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148652.peg.809
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.148652.peg.117
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.148652.peg.810
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.148652.peg.802
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.148652.peg.805
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148652.peg.800
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148652.peg.33
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148652.peg.34
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.148652.peg.688
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.148652.peg.689
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.148652.peg.690
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.148652.peg.692
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.148652.peg.2040
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.148652.peg.1037
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.148652.peg.33
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.148652.peg.34
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.148652.peg.117
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148652.peg.336
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148652.peg.1521
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148652.peg.522
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.148652.peg.1505
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148652.peg.532
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148652.peg.505
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.148652.peg.684
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148652.peg.691
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.148652.peg.688
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.148652.peg.689
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.148652.peg.690
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.148652.peg.692
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.148652.peg.2040
Bacterial_cell_division_cluster	Septum site-determining protein MinD	fig|6666666.148652.peg.1037
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.148652.peg.959
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.148652.peg.959
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148652.peg.356
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148652.peg.24
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148652.peg.342
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148652.peg.495
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148652.peg.1047
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148652.peg.1477
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148652.peg.1502
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148652.peg.1708
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.148652.peg.1707
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.148652.peg.1223
Biotin_biosynthesis	Biotin synthesis protein BioG	fig|6666666.148652.peg.1224
Biotin_biosynthesis	Biotin synthesis protein BioZ	fig|6666666.148652.peg.246
Biotin_biosynthesis	Biotin synthesis protein BioZ	fig|6666666.148652.peg.1845
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148652.peg.949
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148652.peg.1641
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148652.peg.406
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148652.peg.1331
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148652.peg.1047
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148652.peg.1477
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148652.peg.1708
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.148652.peg.1707
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.148652.peg.1223
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioG	fig|6666666.148652.peg.1224
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioZ	fig|6666666.148652.peg.246
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioZ	fig|6666666.148652.peg.1845
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148652.peg.17
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148652.peg.1641
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148652.peg.1047
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148652.peg.1477
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148652.peg.1502
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148652.peg.1708
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.148652.peg.1707
Biotin_synthesis_cluster	Biotin synthesis protein BioC	fig|6666666.148652.peg.1223
Biotin_synthesis_cluster	Biotin synthesis protein BioG	fig|6666666.148652.peg.1224
Biotin_synthesis_cluster	Biotin synthesis protein BioZ	fig|6666666.148652.peg.246
Biotin_synthesis_cluster	Biotin synthesis protein BioZ	fig|6666666.148652.peg.1845
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148652.peg.949
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148652.peg.17
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148652.peg.1641
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148652.peg.406
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148652.peg.1331
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148652.peg.358
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.148652.peg.314
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.148652.peg.1725
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148652.peg.467
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.148652.peg.543
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.148652.peg.1778
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.148652.peg.1779
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148652.peg.388
CBSS-176280.1.peg.1561	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148652.peg.1035
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148652.peg.121
CBSS-176280.1.peg.1561	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148652.peg.547
CBSS-196620.1.peg.2477	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148652.peg.122
CBSS-196620.1.peg.2477	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148652.peg.814
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148652.peg.1371
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148652.peg.2060
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.148652.peg.2023
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.148652.peg.1457
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.148652.peg.1457
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148652.peg.468
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148652.peg.1558
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148652.peg.759
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.148652.peg.1664
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148652.peg.19
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148652.peg.52
CBSS-226186.1.peg.3978	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148652.peg.596
CBSS-226186.1.peg.3978	FIG032012: hypothetical protein	fig|6666666.148652.peg.597
CBSS-226186.1.peg.3978	FIG036016: hypothetical protein	fig|6666666.148652.peg.598
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148652.peg.5
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148652.peg.1942
CBSS-226186.1.peg.4416	Cell division ZapA family protein	fig|6666666.148652.peg.1943
CBSS-226186.1.peg.4416	FIG034863: hypothetical protein	fig|6666666.148652.peg.1944
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148652.peg.697
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.148652.peg.368
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148652.peg.510
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148652.peg.596
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148652.peg.1831
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148652.peg.596
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148652.peg.1831
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.148652.peg.824
CBSS-296591.1.peg.2330	NAD-dependent epimerase/dehydratase family protein	fig|6666666.148652.peg.110
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148652.peg.1810
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148652.peg.485
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148652.peg.1180
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.148652.peg.1916
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.148652.peg.1917
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148652.peg.610
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.148652.peg.1027
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148652.peg.521
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148652.peg.840
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.148652.peg.236
CBSS-316407.3.peg.1371	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.148652.peg.849
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148652.peg.757
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148652.peg.757
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.148652.peg.667
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148652.peg.1433
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.148652.peg.1434
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148652.peg.855
CBSS-326442.4.peg.1852	LSU m5C1962 methyltransferase RlmI	fig|6666666.148652.peg.1827
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148652.peg.1780
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148652.peg.36
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148652.peg.1830
CBSS-342610.3.peg.283	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148652.peg.1035
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.151
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.233
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.298
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.1057
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.1318
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.1599
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.1875
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.148652.peg.1063
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148652.peg.649
CBSS-354.1.peg.2917	FIG003879: Predicted amidohydrolase	fig|6666666.148652.peg.1607
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.148652.peg.689
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.148652.peg.690
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.148652.peg.2040
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148652.peg.900
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148652.peg.952
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148652.peg.1365
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.148652.peg.646
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148652.peg.2024
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148652.peg.1738
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.148652.peg.1175
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148652.peg.1426
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148652.peg.1995
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.148652.peg.957
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148652.peg.1431
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148652.peg.922
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148652.peg.922
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.148652.peg.1571
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148652.peg.721
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148652.peg.1029
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148652.peg.809
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148652.peg.691
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148652.peg.659
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.148652.peg.1540
CBSS-83333.1.peg.946	LSU m5C1962 methyltransferase RlmI	fig|6666666.148652.peg.1827
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148652.peg.1738
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148652.peg.224
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148652.peg.484
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148652.peg.212
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148652.peg.887
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148652.peg.397
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148652.peg.1521
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148652.peg.55
CRISPRs	CRISPR-associated RecB family exonuclease Cas4a	fig|6666666.148652.peg.1588
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.148652.peg.1591
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.148652.peg.1586
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.148652.peg.1587
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.148652.peg.1585
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.148652.peg.1444
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148652.peg.1445
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148652.peg.546
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148652.peg.1733
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148652.peg.1575
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148652.peg.1713
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148652.peg.1741
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148652.peg.955
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.148652.peg.1740
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148652.peg.991
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148652.peg.201
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148652.peg.539
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148652.peg.858
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148652.peg.1371
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148652.peg.2060
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.148652.peg.1119
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148652.peg.325
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148652.peg.414
Capsular_Polysaccharides_Biosynthesis_and_Assembly	Tyrosine-protein kinase Wzc (EC 2.7.10.2)	fig|6666666.148652.peg.1981
Capsular_heptose_biosynthesis	GDP-L-fucose synthetase (EC 1.1.1.271)	fig|6666666.148652.peg.1072
Capsular_heptose_biosynthesis	GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	fig|6666666.148652.peg.1073
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148652.peg.487
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.148652.peg.69
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148652.peg.538
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148652.peg.787
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148652.peg.538
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148652.peg.787
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.148652.peg.1398
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148652.peg.33
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148652.peg.34
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148652.peg.1340
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148652.peg.493
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148652.peg.914
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.148652.peg.1939
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148652.peg.1279
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.148652.peg.1445
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.148652.peg.2039
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.148652.peg.1690
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148652.peg.1689
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148652.peg.603
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148652.peg.781
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148652.peg.499
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148652.peg.527
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148652.peg.850
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148652.peg.940
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148652.peg.545
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148652.peg.9
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148652.peg.10
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.148652.peg.2063
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.148652.peg.1471
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148652.peg.1635
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148652.peg.846
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148652.peg.1075
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148652.peg.1282
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148652.peg.1352
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148652.peg.492
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148652.peg.1112
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148652.peg.1353
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148652.peg.193
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.148652.peg.667
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148652.peg.1520
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148652.peg.925
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148652.peg.1520
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148652.peg.836
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148652.peg.1097
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148652.peg.994
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148652.peg.1100
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148652.peg.1681
Cobalamin_synthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148652.peg.1099
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148652.peg.2018
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148652.peg.1679
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148652.peg.1681
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148652.peg.1682
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148652.peg.1682
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148652.peg.1679
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148652.peg.996
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148652.peg.998
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148652.peg.995
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148652.peg.1406
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148652.peg.1098
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148652.peg.1893
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148652.peg.1495
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148652.peg.1656
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.148652.peg.1697
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148652.peg.1495
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148652.peg.1656
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148652.peg.900
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.148652.peg.1494
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.148652.peg.1968
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.148652.peg.1517
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148652.peg.1068
Coenzyme_A_Biosynthesis	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148652.peg.343
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.148652.peg.2021
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148652.peg.2016
Coenzyme_A_Biosynthesis	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148652.peg.1991
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148652.peg.1831
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.148652.peg.916
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.148652.peg.916
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148652.peg.1068
Coenzyme_A_Biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148652.peg.343
Coenzyme_A_Biosynthesis_cluster	FIG137884: hypothetical protein	fig|6666666.148652.peg.2042
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148652.peg.2016
Coenzyme_A_Biosynthesis_cluster	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148652.peg.1991
Coenzyme_B12_biosynthesis	Adenosylcobinamide amidohydrolase (EC 3.5.1.90)	fig|6666666.148652.peg.2028
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148652.peg.1097
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148652.peg.994
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148652.peg.1100
Coenzyme_B12_biosynthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148652.peg.1681
Coenzyme_B12_biosynthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148652.peg.1099
Coenzyme_B12_biosynthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148652.peg.2018
Coenzyme_B12_biosynthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148652.peg.1679
Coenzyme_B12_biosynthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148652.peg.1681
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148652.peg.1682
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148652.peg.1682
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)	fig|6666666.148652.peg.1680
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)	fig|6666666.148652.peg.1680
Coenzyme_B12_biosynthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148652.peg.1679
Coenzyme_B12_biosynthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148652.peg.996
Coenzyme_B12_biosynthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148652.peg.998
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148652.peg.995
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148652.peg.1406
Coenzyme_B12_biosynthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148652.peg.1098
Coenzyme_B12_biosynthesis	Predicted cobalt transporter in Bacteroides_Porphyromonas	fig|6666666.148652.peg.898
Coenzyme_B12_biosynthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148652.peg.1893
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.148652.peg.1895
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148652.peg.1896
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148652.peg.2030
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148652.peg.1304
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)	fig|6666666.148652.peg.215
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148652.peg.512
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.148652.peg.192
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.148652.peg.1207
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.148652.peg.451
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148652.peg.925
Conjugative_transposon,_Bacteroidales	Conjugative transposon primase TraP	fig|6666666.148652.peg.1875
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148652.peg.261
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148652.peg.1857
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148652.peg.1862
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148652.peg.262
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148652.peg.938
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148652.peg.1858
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148652.peg.1859
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraD	fig|6666666.148652.peg.1863
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.148652.peg.264
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.148652.peg.1864
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.148652.peg.265
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.148652.peg.1866
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.148652.peg.266
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.148652.peg.1867
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.148652.peg.267
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.148652.peg.1868
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.148652.peg.268
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.148652.peg.1869
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.148652.peg.269
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.148652.peg.1870
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraL	fig|6666666.148652.peg.1871
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148652.peg.271
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148652.peg.1872
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.148652.peg.272
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.148652.peg.1873
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148652.peg.273
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148652.peg.1874
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148652.peg.274
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148652.peg.1876
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.148652.peg.258
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.148652.peg.1854
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.148652.peg.257
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.148652.peg.1853
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148652.peg.259
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148652.peg.935
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148652.peg.1855
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148652.peg.336
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148652.peg.1153
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.148652.peg.1622
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148652.peg.397
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148652.peg.1521
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148652.peg.1137
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148652.peg.1531
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148652.peg.955
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.148652.peg.1505
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148652.peg.532
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148652.peg.505
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148652.peg.633
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.148652.peg.59
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.148652.peg.1469
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148652.peg.122
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148652.peg.122
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.148652.peg.316
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.148652.peg.1118
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148652.peg.1426
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148652.peg.1995
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.148652.peg.1972
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148652.peg.908
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148652.peg.1008
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148652.peg.908
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148652.peg.1008
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148652.peg.1741
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.148652.peg.646
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.148652.peg.1247
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.148652.peg.1469
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148652.peg.1646
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.148652.peg.95
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148652.peg.1340
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148652.peg.493
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.148652.peg.1386
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148652.peg.446
DNA_processing_cluster	Recombination protein RecR	fig|6666666.148652.peg.648
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.148652.peg.1363
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog in greater Bacteroides group	fig|6666666.148652.peg.1512
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.148652.peg.1919
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.148652.peg.782
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148652.peg.388
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.148652.peg.1452
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.148652.peg.1167
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.148652.peg.684
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.148652.peg.918
DNA_repair,_bacterial	DNA-cytosine methyltransferase (EC 2.1.1.37)	fig|6666666.148652.peg.164
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.148652.peg.1423
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148652.peg.584
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148652.peg.461
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148652.peg.328
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148652.peg.2024
DNA_repair,_bacterial	RecA protein	fig|6666666.148652.peg.219
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.148652.peg.1425
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.148652.peg.1949
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.148652.peg.84
DNA_repair,_bacterial_MutL-MutS_system	MutS domain protein, family 2	fig|6666666.148652.peg.377
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.148652.peg.1923
DNA_repair,_bacterial_RecBCD_pathway	RecD-like DNA helicase Atu2026	fig|6666666.148652.peg.599
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.148652.peg.1953
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.148652.peg.1332
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.148652.peg.1939
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.148652.peg.797
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.148652.peg.219
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.148652.peg.648
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.148652.peg.1425
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148652.peg.1646
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148652.peg.1365
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.148652.peg.84
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.148652.peg.506
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.148652.peg.219
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.148652.peg.18
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148652.peg.1137
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.148652.peg.1398
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148652.peg.1340
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148652.peg.493
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148652.peg.914
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.148652.peg.1939
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148652.peg.10
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.148652.peg.1938
DNA_structural_proteins,_bacterial	DNA-binding protein HU-beta	fig|6666666.148652.peg.54
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.148652.peg.650
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148652.peg.1153
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148652.peg.446
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2)	fig|6666666.148652.peg.251
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2)	fig|6666666.148652.peg.1842
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148652.peg.1340
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148652.peg.493
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148652.peg.1220
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148652.peg.1830
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148652.peg.589
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.148652.peg.1446
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.148652.peg.687
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.148652.peg.1616
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.148652.peg.1028
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.148652.peg.923
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148652.peg.687
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.148652.peg.1665
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.148652.peg.1762
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.148652.peg.1762
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148652.peg.1461
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148652.peg.425
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.148652.peg.1820
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.148652.peg.1821
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148652.peg.1448
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148652.peg.1447
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.148652.peg.317
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148652.peg.385
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148652.peg.1624
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.148652.peg.384
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.148652.peg.1606
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148652.peg.1663
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.148652.peg.586
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148652.peg.1151
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.148652.peg.785
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148652.peg.566
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148652.peg.728
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.148652.peg.1691
Dimethylarginine_metabolism	NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)	fig|6666666.148652.peg.1168
Dimethylarginine_metabolism	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148652.peg.816
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148652.peg.38
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148652.peg.1492
ECSIG4-SIG7	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148652.peg.1533
ECSIG4-SIG7	Organic solvent tolerance protein precursor	fig|6666666.148652.peg.903
ECSIG4-SIG7	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148652.peg.40
ECSIG4-SIG7	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148652.peg.1952
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.148652.peg.1327
Entner-Doudoroff_Pathway	Glucokinase (EC 2.7.1.2)	fig|6666666.148652.peg.1117
Entner-Doudoroff_Pathway	Glucokinase (EC 2.7.1.2)	fig|6666666.148652.peg.1485
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148652.peg.1575
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148652.peg.1713
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148652.peg.45
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.148652.peg.368
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148652.peg.367
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 1 family protein	fig|6666666.148652.peg.1601
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148652.peg.1148
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148652.peg.1719
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148652.peg.1661
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148652.peg.697
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	fig|6666666.148652.peg.1459
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.148652.peg.822
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.148652.peg.1460
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein	fig|6666666.148652.peg.104
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	fig|6666666.148652.peg.1389
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.148652.peg.37
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148652.peg.368
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148652.peg.367
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.148652.peg.368
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.148652.peg.1683
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148652.peg.367
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.148652.peg.345
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.148652.peg.1063
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.148652.peg.345
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148652.peg.809
Flavodoxin	Flavodoxin	fig|6666666.148652.peg.593
Flavodoxin	Flavodoxin 1	fig|6666666.148652.peg.909
Flavodoxin	Flavodoxin 2	fig|6666666.148652.peg.1320
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.148652.peg.1320
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148652.peg.214
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148652.peg.469
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148652.peg.913
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148652.peg.1352
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148652.peg.1527
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.148652.peg.2001
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148652.peg.1696
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148652.peg.958
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.148652.peg.2001
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148652.peg.993
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148652.peg.492
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148652.peg.1112
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148652.peg.1353
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148652.peg.1526
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148652.peg.214
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148652.peg.469
Folate_biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148652.peg.343
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148652.peg.527
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148652.peg.850
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148652.peg.940
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148652.peg.1696
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148652.peg.958
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148652.peg.993
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148652.peg.545
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148652.peg.2016
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148652.peg.1635
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148652.peg.777
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.148652.peg.720
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148652.peg.1067
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148652.peg.1067
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148652.peg.777
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148652.peg.339
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148652.peg.2051
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.148652.peg.1814
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.148652.peg.1416
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148652.peg.702
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148652.peg.1304
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.148652.peg.516
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148652.peg.1101
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.148652.peg.1623
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase I, cytoplasmic (EC 3.5.1.1)	fig|6666666.148652.peg.1578
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148652.peg.702
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148652.peg.1144
Glutathione:_Non-redox_reactions	Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis	fig|6666666.148652.peg.602
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148652.peg.908
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148652.peg.1008
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148652.peg.871
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148652.peg.2019
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148652.peg.701
Glycine_Biosynthesis	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.148652.peg.2013
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148652.peg.845
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148652.peg.2019
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148652.peg.484
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148652.peg.1080
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148652.peg.908
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148652.peg.1008
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.148652.peg.1027
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148652.peg.601
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148652.peg.775
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148652.peg.775
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148652.peg.1081
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148652.peg.1002
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148652.peg.1429
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148652.peg.2037
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148652.peg.845
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148652.peg.1780
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148652.peg.484
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148652.peg.1281
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.148652.peg.1027
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148652.peg.601
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148652.peg.521
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148652.peg.840
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148652.peg.417
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148652.peg.1248
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148652.peg.523
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148652.peg.1095
Glycogen_metabolism	Putative glycogen debranching enzyme, archaeal type, TIGR01561	fig|6666666.148652.peg.680
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148652.peg.871
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.148652.peg.1327
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148652.peg.546
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148652.peg.1733
Glycolysis_and_Gluconeogenesis	Glucokinase (EC 2.7.1.2)	fig|6666666.148652.peg.1117
Glycolysis_and_Gluconeogenesis	Glucokinase (EC 2.7.1.2)	fig|6666666.148652.peg.1485
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148652.peg.725
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148652.peg.1575
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148652.peg.1713
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148652.peg.45
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.148652.peg.12
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148652.peg.1347
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148652.peg.991
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.148652.peg.1327
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148652.peg.725
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148652.peg.1713
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148652.peg.45
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148652.peg.1347
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148652.peg.991
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.148652.peg.797
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.148652.peg.823
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148652.peg.877
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148652.peg.1426
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148652.peg.1995
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148652.peg.1431
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148652.peg.922
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148652.peg.1213
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.148652.peg.1473
GroEL_GroES	Chaperone protein DnaK	fig|6666666.148652.peg.889
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.148652.peg.1440
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.148652.peg.1441
GroEL_GroES	Heat shock protein GrpE	fig|6666666.148652.peg.1472
Group_II_intron-associated_genes	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	fig|6666666.148652.peg.1865
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.148652.peg.1473
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.148652.peg.889
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.148652.peg.1472
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148652.peg.2014
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148652.peg.947
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148652.peg.836
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148652.peg.203
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148652.peg.10
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.148652.peg.695
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.148652.peg.98
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148652.peg.1391
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.148652.peg.761
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148652.peg.372
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148652.peg.531
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148652.peg.201
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148652.peg.539
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148652.peg.858
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.148652.peg.48
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148652.peg.491
Heme_and_Siroheme_Biosynthesis	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148652.peg.2014
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.148652.peg.839
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148652.peg.201
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148652.peg.539
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148652.peg.858
Hfl_operon	GTP-binding protein HflX	fig|6666666.148652.peg.627
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148652.peg.628
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148652.peg.1793
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.148652.peg.1788
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.148652.peg.1792
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.148652.peg.638
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5'-nucleotidase YjjG (EC 3.1.3.5)	fig|6666666.148652.peg.96
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148652.peg.879
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148652.peg.1030
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148652.peg.947
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.148652.peg.1504
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.148652.peg.1505
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148652.peg.1899
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148652.peg.1898
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.148652.peg.225
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.148652.peg.841
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148652.peg.1153
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148652.peg.922
Inteins	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148652.peg.583
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148652.peg.1019
Inteins	Translation initiation factor 2	fig|6666666.148652.peg.1725
Inteins	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.148652.peg.408
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148652.peg.1738
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148652.peg.1136
Iron-sulfur_cluster_assembly	Ferritin-like protein 2	fig|6666666.148652.peg.1074
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148652.peg.1722
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.148652.peg.1723
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.148652.peg.1721
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.148652.peg.1474
Iron-sulfur_cluster_assembly	Sulfur acceptor protein SufE for iron-sulfur cluster assembly	fig|6666666.148652.peg.838
Iron-sulfur_cluster_assembly	Thiamin biosynthesis lipoprotein ApbE	fig|6666666.148652.peg.1773
Isoleucine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148652.peg.369
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148652.peg.1071
Isoleucine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148652.peg.373
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148652.peg.538
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148652.peg.787
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148652.peg.721
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148652.peg.1506
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148652.peg.1029
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148652.peg.1419
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148652.peg.462
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148652.peg.303
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148652.peg.975
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148652.peg.538
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148652.peg.787
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148652.peg.659
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148652.peg.538
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148652.peg.787
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148652.peg.538
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148652.peg.787
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148652.peg.538
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148652.peg.787
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148652.peg.538
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148652.peg.787
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148652.peg.787
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148652.peg.659
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148652.peg.517
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.148652.peg.2041
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.148652.peg.490
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.148652.peg.1319
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148652.peg.1660
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.148652.peg.779
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	fig|6666666.148652.peg.1392
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148652.peg.880
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.148652.peg.196
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148652.peg.325
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148652.peg.414
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.148652.peg.206
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148652.peg.1475
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148652.peg.1662
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.148652.peg.722
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.148652.peg.1582
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.148652.peg.629
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148652.peg.1004
LMPTP_YfkJ_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148652.peg.1035
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148652.peg.121
LOS_core_oligosaccharide_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.148652.peg.490
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.148652.peg.1932
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.148652.peg.1930
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148652.peg.1931
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148652.peg.1933
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.148652.peg.1928
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.148652.peg.1929
Lactate_utilization	L-lactate permease	fig|6666666.148652.peg.1595
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.148652.peg.1003
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148652.peg.1004
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518	fig|6666666.148652.peg.1005
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148652.peg.1810
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148652.peg.112
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148652.peg.777
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148652.peg.339
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148652.peg.2051
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.148652.peg.113
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148652.peg.1810
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148652.peg.339
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148652.peg.2051
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148652.peg.55
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148652.peg.1071
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148652.peg.1071
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148652.peg.1281
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.148652.peg.408
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.148652.peg.764
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148652.peg.1598
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.148652.peg.764
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148652.peg.1598
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148652.peg.316
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148652.peg.952
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.148652.peg.1284
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.148652.peg.669
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.148652.peg.315
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148652.peg.1661
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148652.peg.1660
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148652.peg.880
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148652.peg.656
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148652.peg.657
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148652.peg.658
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148652.peg.1749
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148652.peg.1475
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148652.peg.1662
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.148652.peg.1424
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.148652.peg.1424
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148652.peg.1399
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148652.peg.791
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148652.peg.1640
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148652.peg.812
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.148652.peg.854
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148652.peg.855
Lysine_Biosynthesis_DAP_Pathway	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148652.peg.1285
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148652.peg.1399
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148652.peg.791
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148652.peg.1640
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148652.peg.812
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.148652.peg.854
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148652.peg.855
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148652.peg.1285
Lysine_degradation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148652.peg.376
Lysine_degradation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148652.peg.375
Lysine_degradation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148652.peg.379
Lysine_fermentation	3,5-diaminohexanoate dehydrogenase (EC 1.4.1.11)	fig|6666666.148652.peg.380
Lysine_fermentation	3-aminobutyryl-CoA ammonia-lyase (EC 4.3.1.14)	fig|6666666.148652.peg.382
Lysine_fermentation	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148652.peg.370
Lysine_fermentation	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148652.peg.369
Lysine_fermentation	3-keto-5-aminohexanoate cleavage enzyme	fig|6666666.148652.peg.381
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148652.peg.383
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148652.peg.374
Lysine_fermentation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148652.peg.373
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148652.peg.371
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148652.peg.530
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148652.peg.372
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148652.peg.531
Lysine_fermentation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148652.peg.376
Lysine_fermentation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148652.peg.375
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148652.peg.379
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148652.peg.1448
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148652.peg.1447
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.151
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.233
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.298
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.1057
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.1318
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.1599
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148652.peg.1875
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.148652.peg.1063
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.148652.peg.1924
Macromolecular_synthesis_operon	Transamidase GatB domain protein	fig|6666666.148652.peg.799
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148652.peg.505
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148652.peg.1426
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148652.peg.1995
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.148652.peg.1119
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.148652.peg.41
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148652.peg.523
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148652.peg.112
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148652.peg.338
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148652.peg.678
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148652.peg.1095
Maltose_and_Maltodextrin_Utilization	Predicted glucose transporter in maltodextrin utilization gene cluster	fig|6666666.148652.peg.872
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148652.peg.333
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148652.peg.1559
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148652.peg.1728
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148652.peg.1730
Mannose_Metabolism	Beta-mannosidase (EC 3.2.1.25)	fig|6666666.148652.peg.1451
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)	fig|6666666.148652.peg.1508
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.148652.peg.2005
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.148652.peg.356
Melibiose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148652.peg.777
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.148652.peg.924
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148652.peg.224
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148652.peg.808
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148652.peg.344
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148652.peg.353
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148652.peg.68
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.148652.peg.1806
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148652.peg.1503
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148652.peg.757
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148652.peg.616
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148652.peg.758
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148652.peg.757
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148652.peg.1144
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148652.peg.25
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148652.peg.1554
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148652.peg.1391
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.148652.peg.1965
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148652.peg.1403
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.148652.peg.340
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148652.peg.224
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148652.peg.36
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148652.peg.1374
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148652.peg.1934
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148652.peg.1935
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.148652.peg.767
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.148652.peg.768
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.148652.peg.769
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.148652.peg.1204
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.148652.peg.1203
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.148652.peg.1202
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.148652.peg.1927
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148652.peg.971
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148652.peg.970
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148652.peg.969
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148652.peg.846
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148652.peg.1810
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148652.peg.506
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148652.peg.506
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.148652.peg.1449
NAD_and_NADP_cofactor_biosynthesis_global	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148652.peg.971
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.148652.peg.197
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.148652.peg.1449
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148652.peg.1902
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148652.peg.1649
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.148652.peg.1650
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148652.peg.970
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148652.peg.969
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.148652.peg.1772
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.148652.peg.1767
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.148652.peg.1768
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.148652.peg.1769
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.148652.peg.1771
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.148652.peg.1770
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.148652.peg.859
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.148652.peg.861
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.148652.peg.862
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.148652.peg.863
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.148652.peg.864
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.148652.peg.865
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase	fig|6666666.148652.peg.133
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Membrane protein associated with methylmalonyl-CoA decarboxylase	fig|6666666.148652.peg.130
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148652.peg.129
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148652.peg.134
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.148652.peg.134
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Na+/H+ antiporter NhaA type	fig|6666666.148652.peg.634
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148652.peg.1902
Nitrate_and_nitrite_ammonification	Cytochrome c nitrite reductase, small subunit NrfH	fig|6666666.148652.peg.1325
Nitrate_and_nitrite_ammonification	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148652.peg.1323
Nitrate_and_nitrite_ammonification	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148652.peg.1324
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148652.peg.473
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.148652.peg.1379
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.148652.peg.683
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148652.peg.721
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148652.peg.1506
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148652.peg.1029
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148652.peg.1419
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148652.peg.462
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148652.peg.303
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148652.peg.975
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.148652.peg.494
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148652.peg.1030
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148652.peg.1727
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.148652.peg.314
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.148652.peg.1726
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.148652.peg.1725
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148652.peg.913
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148652.peg.1310
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148652.peg.1789
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.148652.peg.341
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148652.peg.341
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.148652.peg.91
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.148652.peg.1424
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.148652.peg.91
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148652.peg.473
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.148652.peg.91
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.148652.peg.1415
Oxidative_stress	Rubrerythrin	fig|6666666.148652.peg.655
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148652.peg.1834
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148652.peg.1835
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148652.peg.1937
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148652.peg.1741
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148652.peg.425
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148652.peg.955
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.148652.peg.720
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.148652.peg.1740
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148652.peg.1699
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148652.peg.1699
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148652.peg.809
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148652.peg.1130
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148652.peg.224
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148652.peg.1101
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148652.peg.547
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148652.peg.691
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.148652.peg.807
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.148652.peg.692
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148652.peg.1597
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148652.peg.723
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148652.peg.804
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148652.peg.803
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148652.peg.806
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148652.peg.808
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148652.peg.344
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148652.peg.353
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148652.peg.1130
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148652.peg.803
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148652.peg.806
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148652.peg.808
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148652.peg.344
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148652.peg.353
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.148652.peg.1108
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148652.peg.1105
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148652.peg.1107
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148652.peg.450
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148652.peg.1952
Periplasmic_Stress_Response	HtrA protease/chaperone protein	fig|6666666.148652.peg.1064
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148652.peg.656
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148652.peg.657
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148652.peg.1952
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148652.peg.495
Persister_Cells	Cell division inhibitor	fig|6666666.148652.peg.1540
Persister_Cells	HipA protein	fig|6666666.148652.peg.1258
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.148652.peg.215
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148652.peg.211
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148652.peg.1436
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.148652.peg.108
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148652.peg.515
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148652.peg.1298
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148652.peg.1299
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148652.peg.922
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148652.peg.922
Phosphate_metabolism	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148652.peg.628
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.148652.peg.1308
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.148652.peg.744
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148652.peg.1100
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148652.peg.45
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148652.peg.484
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148652.peg.1281
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148652.peg.908
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148652.peg.1008
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.148652.peg.1027
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148652.peg.601
Photorespiration_(oxidative_C2_cycle)	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148652.peg.871
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148652.peg.845
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148652.peg.33
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148652.peg.34
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148652.peg.1101
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148652.peg.522
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148652.peg.1295
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148652.peg.757
Polyamine_Metabolism	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148652.peg.31
Polyamine_Metabolism	Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-)	fig|6666666.148652.peg.23
Polyamine_Metabolism	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148652.peg.32
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148652.peg.369
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148652.peg.370
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148652.peg.369
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148652.peg.383
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148652.peg.383
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148652.peg.374
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148652.peg.515
Polyphosphate	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148652.peg.628
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148652.peg.538
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148652.peg.787
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148652.peg.538
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148652.peg.787
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148652.peg.787
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148652.peg.659
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148652.peg.1105
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148652.peg.1107
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148652.peg.450
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.148652.peg.1301
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148652.peg.1504
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148652.peg.1504
Potassium_homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.148652.peg.1626
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148652.peg.1505
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148652.peg.1505
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.148652.peg.407
Programmed_frameshift	programmed frameshift-containing	fig|6666666.148652.peg.407
Proline,_4-hydroxyproline_uptake_and_utilization	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148652.peg.814
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148652.peg.367
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148652.peg.129
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148652.peg.134
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA epimerase (EC 5.1.99.1)	fig|6666666.148652.peg.128
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.148652.peg.80
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148652.peg.473
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.148652.peg.1473
Protein_chaperones	Chaperone protein DnaK	fig|6666666.148652.peg.889
Protein_chaperones	Chaperone protein HtpG	fig|6666666.148652.peg.848
Protein_chaperones	ClpB protein	fig|6666666.148652.peg.594
Protein_chaperones	ClpB protein	fig|6666666.148652.peg.1536
Protein_chaperones	Heat shock protein GrpE	fig|6666666.148652.peg.1472
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148652.peg.121
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148652.peg.945
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148652.peg.1253
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148652.peg.1157
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148652.peg.1252
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148652.peg.1404
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.148652.peg.1954
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.148652.peg.1955
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.148652.peg.988
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148652.peg.594
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148652.peg.1536
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.148652.peg.1167
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148652.peg.787
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.148652.peg.1706
Purine_Utilization	Xanthine permease	fig|6666666.148652.peg.829
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.148652.peg.302
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148652.peg.5
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148652.peg.1942
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148652.peg.5
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.148652.peg.1025
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.148652.peg.544
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148652.peg.589
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.148652.peg.2002
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148652.peg.1067
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148652.peg.1067
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148652.peg.1433
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148652.peg.545
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148652.peg.1443
Purine_conversions	Nucleotide pyrophosphatase (EC 3.6.1.9)	fig|6666666.148652.peg.50
Purine_conversions	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148652.peg.628
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148652.peg.566
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148652.peg.728
Purine_conversions	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148652.peg.828
Purine_conversions	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148652.peg.792
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148652.peg.584
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148652.peg.461
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148652.peg.1067
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148652.peg.1067
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148652.peg.1443
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148652.peg.1699
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148652.peg.1506
Pyridoxin_(Vitamin_B6)_Biosynthesis	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148652.peg.1533
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148652.peg.1080
Pyridoxin_(Vitamin_B6)_Biosynthesis	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)	fig|6666666.148652.peg.709
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148652.peg.1575
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148652.peg.1081
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.148652.peg.1732
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)	fig|6666666.148652.peg.198
Pyrimidine_utilization	Uracil permease	fig|6666666.148652.peg.586
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148652.peg.1503
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.148652.peg.353
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148652.peg.1071
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148652.peg.775
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148652.peg.775
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.148652.peg.1743
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.148652.peg.134
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.148652.peg.1714
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148652.peg.1347
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148652.peg.368
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative	fig|6666666.148652.peg.1303
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148652.peg.1401
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148652.peg.367
Queuosine-Archaeosine_Biosynthesis	Epoxyqueuosine (oQ) reductase QueG	fig|6666666.148652.peg.2010
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148652.peg.993
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148652.peg.704
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148652.peg.1996
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.148652.peg.605
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148652.peg.1384
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148652.peg.1383
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148652.peg.468
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148652.peg.1558
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148652.peg.759
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148652.peg.512
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148652.peg.596
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.148652.peg.919
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148652.peg.1700
RNA_methylation	LSU m5C1962 methyltransferase RlmI	fig|6666666.148652.peg.1827
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148652.peg.1531
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148652.peg.836
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148652.peg.40
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148652.peg.603
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148652.peg.1625
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.148652.peg.346
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148652.peg.1038
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148652.peg.1143
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.148652.peg.1422
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148652.peg.33
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148652.peg.34
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148652.peg.1279
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148652.peg.603
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148652.peg.781
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148652.peg.1279
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148652.peg.1445
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.148652.peg.2039
RNA_modification_cluster	Protein YidD	fig|6666666.148652.peg.1690
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148652.peg.1689
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.148652.peg.1174
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148652.peg.1934
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148652.peg.1935
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.148652.peg.503
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148652.peg.649
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148652.peg.358
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.148652.peg.1458
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148652.peg.590
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148652.peg.496
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148652.peg.1131
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148652.peg.698
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148652.peg.1154
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148652.peg.467
RecA_and_RecX	RecA protein	fig|6666666.148652.peg.219
RecA_and_RecX	Regulatory protein RecX	fig|6666666.148652.peg.18
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148652.peg.38
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148652.peg.1492
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148652.peg.1374
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148652.peg.1575
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148652.peg.1401
Redox-dependent_regulation_of_nucleus_processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148652.peg.1902
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148652.peg.1649
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.148652.peg.1450
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148652.peg.1340
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148652.peg.493
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148652.peg.1220
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148652.peg.1830
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148652.peg.1
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148652.peg.581
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.148652.peg.1262
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.148652.peg.1260
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148652.peg.1264
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148652.peg.1266
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148652.peg.488
Rhamnose_containing_glycans	Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)	fig|6666666.148652.peg.1534
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148652.peg.1810
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.148652.peg.409
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148652.peg.487
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148652.peg.486
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148652.peg.485
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148652.peg.1058
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148652.peg.20
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148652.peg.457
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148652.peg.20
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148652.peg.1034
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148652.peg.1058
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148652.peg.1034
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148652.peg.1134
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148652.peg.1058
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148652.peg.20
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148652.peg.457
Riboflavin,_FMN_and_FAD_metabolism_in_plants	C-terminal domain of CinA type S	fig|6666666.148652.peg.506
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148652.peg.20
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.148652.peg.83
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148652.peg.1034
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148652.peg.1058
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148652.peg.1403
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148652.peg.1034
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148652.peg.1134
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148652.peg.467
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148652.peg.1058
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148652.peg.20
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148652.peg.457
Riboflavin_synthesis_cluster	C-terminal domain of CinA type S	fig|6666666.148652.peg.506
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148652.peg.20
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148652.peg.1058
Riboflavin_synthesis_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148652.peg.1035
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148652.peg.1
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148652.peg.581
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148652.peg.1663
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148652.peg.1134
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148652.peg.955
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148652.peg.205
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.148652.peg.1286
Ribonuclease_H	Ribonuclease HI-related protein 3	fig|6666666.148652.peg.883
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148652.peg.1137
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148652.peg.1137
Ribonucleotide_reduction	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148652.peg.583
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.148652.peg.1020
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148652.peg.1019
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148652.peg.25
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.148652.peg.1204
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148652.peg.1614
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.148652.peg.1183
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.148652.peg.1932
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.148652.peg.1930
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.148652.peg.1914
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.148652.peg.1190
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.148652.peg.1182
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.148652.peg.1193
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.148652.peg.1173
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.148652.peg.1184
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.148652.peg.842
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148652.peg.1931
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.148652.peg.767
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.148652.peg.1778
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.148652.peg.1195
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.148652.peg.1198
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.148652.peg.1189
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.148652.peg.8
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.148652.peg.1779
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.148652.peg.743
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.148652.peg.1192
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.148652.peg.1197
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.148652.peg.1065
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.148652.peg.1065
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.148652.peg.821
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.148652.peg.742
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.148652.peg.742
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.148652.peg.2039
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.148652.peg.768
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.148652.peg.1178
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.148652.peg.1200
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.148652.peg.1199
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.148652.peg.1188
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.148652.peg.1185
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148652.peg.1933
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.148652.peg.1060
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.148652.peg.1201
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.148652.peg.1176
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.148652.peg.1204
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.148652.peg.1177
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.148652.peg.1187
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.148652.peg.1187
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.148652.peg.1453
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.148652.peg.1582
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.148652.peg.1191
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.148652.peg.1061
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.148652.peg.1061
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.148652.peg.1196
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.148652.peg.2063
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.148652.peg.504
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.148652.peg.1924
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.148652.peg.1916
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.148652.peg.1194
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.148652.peg.1175
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.148652.peg.1183
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.148652.peg.1062
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.148652.peg.1203
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.148652.peg.1186
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.148652.peg.1915
Ribosome_activity_modulation	Ribosome hibernation protein YhbH	fig|6666666.148652.peg.1925
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.148652.peg.722
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148652.peg.1700
Ribosome_biogenesis_bacterial	LSU m5C1962 methyltransferase RlmI	fig|6666666.148652.peg.1827
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148652.peg.496
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148652.peg.1131
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148652.peg.203
Ribosome_biogenesis_bacterial	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148652.peg.1614
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148652.peg.40
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148652.peg.698
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148652.peg.532
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148652.peg.1625
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148652.peg.1404
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.148652.peg.611
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.148652.peg.1916
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.148652.peg.1917
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148652.peg.610
Rubrerythrin	Rubrerythrin	fig|6666666.148652.peg.655
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.148652.peg.1307
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.148652.peg.83
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.148652.peg.1289
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.148652.peg.2046
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.148652.peg.1416
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148652.peg.1736
Selenocysteine_metabolism	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148652.peg.626
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.148652.peg.1037
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148652.peg.1080
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148652.peg.1081
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148652.peg.1002
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148652.peg.1429
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148652.peg.2037
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148652.peg.1002
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148652.peg.1429
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148652.peg.2037
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148652.peg.845
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.148652.peg.575
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148652.peg.952
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148652.peg.952
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148652.peg.789
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148652.peg.790
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148652.peg.1323
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148652.peg.1324
Spore_Core_Dehydration	Spore maturation protein A-like protein	fig|6666666.148652.peg.1432
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148652.peg.9
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.148652.peg.1440
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.148652.peg.1061
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.148652.peg.761
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.148652.peg.1723
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148652.peg.1419
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148652.peg.462
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148652.peg.879
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148652.peg.499
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.148652.peg.810
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.148652.peg.70
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.148652.peg.1311
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.148652.peg.1311
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.148652.peg.125
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148652.peg.126
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148652.peg.127
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148652.peg.1281
TCA_Cycle	Fumarate hydratase class I (EC 4.2.1.2)	fig|6666666.148652.peg.1387
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148652.peg.1213
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148652.peg.126
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148652.peg.127
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148652.peg.462
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148652.peg.68
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148652.peg.335
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148652.peg.336
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148652.peg.335
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148652.peg.336
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.148652.peg.1202
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.148652.peg.1202
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148652.peg.1506
Thiamin_biosynthesis	Predicted thiamin transporter PnuT	fig|6666666.148652.peg.614
Thiamin_biosynthesis	Sulfur carrier protein ThiS	fig|6666666.148652.peg.440
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.148652.peg.1990
Thiamin_biosynthesis	Thiamin biosynthesis protein ThiC	fig|6666666.148652.peg.439
Thiamin_biosynthesis	Thiamin pyrophosphokinase (EC 2.7.6.2)	fig|6666666.148652.peg.615
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148652.peg.438
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148652.peg.613
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148652.peg.1390
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148652.peg.205
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.148652.peg.437
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.148652.peg.986
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	fig|6666666.148652.peg.987
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.148652.peg.1424
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.148652.peg.220
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148652.peg.510
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148652.peg.417
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.148652.peg.368
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148652.peg.367
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148652.peg.1304
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148652.peg.812
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.148652.peg.854
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148652.peg.701
Threonine_degradation	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.148652.peg.2013
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.148652.peg.471
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.148652.peg.200
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148652.peg.201
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148652.peg.539
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148652.peg.858
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148652.peg.199
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148652.peg.536
Ton_and_Tol_transport_systems	Outer membrane lipoprotein omp16 precursor	fig|6666666.148652.peg.1385
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148652.peg.479
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148652.peg.796
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148652.peg.930
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148652.peg.1104
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148652.peg.1892
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148652.peg.2027
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148652.peg.1727
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.148652.peg.1929
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.148652.peg.672
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.148652.peg.1796
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.148652.peg.1726
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.148652.peg.1286
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.148652.peg.1471
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.148652.peg.1063
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.148652.peg.345
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.148652.peg.1202
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.148652.peg.305
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.148652.peg.818
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.148652.peg.1202
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.148652.peg.305
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.148652.peg.695
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.148652.peg.818
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.148652.peg.1917
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.148652.peg.1927
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148652.peg.397
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.148652.peg.314
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.148652.peg.1179
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.148652.peg.1725
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.148652.peg.769
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.148652.peg.103
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148652.peg.1180
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.148652.peg.1664
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.148652.peg.407
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.148652.peg.1685
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148652.peg.1521
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148652.peg.9
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148652.peg.19
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.148652.peg.611
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.148652.peg.761
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148652.peg.52
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.148652.peg.1504
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148652.peg.1248
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148652.peg.338
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148652.peg.678
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148652.peg.1146
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148652.peg.1409
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.148652.peg.1262
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.148652.peg.1260
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148652.peg.1264
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148652.peg.1266
Type_VI_secretion_systems	ClpB protein	fig|6666666.148652.peg.594
Type_VI_secretion_systems	ClpB protein	fig|6666666.148652.peg.1536
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148652.peg.356
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148652.peg.1597
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148652.peg.723
USS-DB-7	ClpB protein	fig|6666666.148652.peg.594
USS-DB-7	ClpB protein	fig|6666666.148652.peg.1536
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.148652.peg.851
Universal_GTPases	GTP-binding protein EngA	fig|6666666.148652.peg.824
Universal_GTPases	GTP-binding protein EngB	fig|6666666.148652.peg.1809
Universal_GTPases	GTP-binding protein Era	fig|6666666.148652.peg.823
Universal_GTPases	GTP-binding protein HflX	fig|6666666.148652.peg.627
Universal_GTPases	GTP-binding protein Obg	fig|6666666.148652.peg.543
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.148652.peg.983
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148652.peg.1279
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.148652.peg.612
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148652.peg.24
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148652.peg.342
Universal_GTPases	Translation elongation factor G	fig|6666666.148652.peg.1202
Universal_GTPases	Translation elongation factor LepA	fig|6666666.148652.peg.695
Universal_GTPases	Translation elongation factor Tu	fig|6666666.148652.peg.1927
Universal_GTPases	Translation initiation factor 2	fig|6666666.148652.peg.1725
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148652.peg.1699
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148652.peg.1733
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.148652.peg.117
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148652.peg.328
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.148652.peg.95
V-Type_ATP_synthase	V-type ATP synthase subunit A (EC 3.6.3.14)	fig|6666666.148652.peg.1238
V-Type_ATP_synthase	V-type ATP synthase subunit B (EC 3.6.3.14)	fig|6666666.148652.peg.1237
V-Type_ATP_synthase	V-type ATP synthase subunit C (EC 3.6.3.14)	fig|6666666.148652.peg.1239
V-Type_ATP_synthase	V-type ATP synthase subunit D (EC 3.6.3.14)	fig|6666666.148652.peg.1236
V-Type_ATP_synthase	V-type ATP synthase subunit E (EC 3.6.3.14)	fig|6666666.148652.peg.1240
V-Type_ATP_synthase	V-type ATP synthase subunit I (EC 3.6.3.14)	fig|6666666.148652.peg.1235
V-Type_ATP_synthase	V-type ATP synthase subunit K (EC 3.6.3.14)	fig|6666666.148652.peg.1234
Valine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148652.peg.369
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148652.peg.1071
Valine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148652.peg.373
Xanthine_Metabolism_in_Bacteria	Xanthine permease	fig|6666666.148652.peg.829
Xanthine_Metabolism_in_Bacteria	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148652.peg.828
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.148652.peg.537
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.148652.peg.1691
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148652.peg.532
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148652.peg.505
YjeE	NAD(P)HX dehydratase	fig|6666666.148652.peg.1659
YjeE	NAD(P)HX epimerase	fig|6666666.148652.peg.1659
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148652.peg.532
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148652.peg.310
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.148652.peg.1955
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.148652.peg.801
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.148652.peg.802
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.148652.peg.805
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148652.peg.800
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148652.peg.1130
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148652.peg.803
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.148652.peg.801
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.148652.peg.802
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148652.peg.800
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148652.peg.804
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148652.peg.792
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148652.peg.488
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148652.peg.487
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148652.peg.486
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148652.peg.485
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148652.peg.1738
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148652.peg.1136
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148652.peg.1279
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148652.peg.781
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148652.peg.369
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148652.peg.406
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148652.peg.1331
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148652.peg.1153
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.148652.peg.1425
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148652.peg.5
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148652.peg.1942
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148652.peg.5
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.148652.peg.1444
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148652.peg.194
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.148652.peg.974
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148652.peg.566
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148652.peg.728
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148652.peg.417
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.148652.peg.312
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148652.peg.1526
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148652.peg.1151
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148652.peg.519
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148652.peg.1478
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148652.peg.1058
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148652.peg.1034
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148652.peg.1034
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148652.peg.1134
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148652.peg.316
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.148652.peg.316
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148652.peg.1426
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148652.peg.1995
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148652.peg.1431
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148652.peg.922
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148652.peg.922
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148652.peg.1554
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148652.peg.193
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.148652.peg.1421
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.148652.peg.591
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.148652.peg.22
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148652.peg.633
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.148652.peg.107
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148652.peg.491
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148652.peg.877
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.148652.peg.1528
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.148652.peg.954
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.148652.peg.549
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.148652.peg.727
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.148652.peg.6
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.148652.peg.1468
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.148652.peg.82
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.148652.peg.1232
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type	fig|6666666.148652.peg.1040
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148652.peg.1780
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.148652.peg.770
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.148652.peg.1702
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.148652.peg.1720
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.148652.peg.419
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148652.peg.1738
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148652.peg.1136
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148652.peg.194
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.148652.peg.667
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.148652.peg.1633
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148652.peg.993
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148652.peg.1279
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148652.peg.1722
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.148652.peg.1723
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.148652.peg.1721
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148652.peg.1700
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.148652.peg.605
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148652.peg.1384
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148652.peg.1383
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148652.peg.468
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148652.peg.1558
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148652.peg.1736
tRNA_modification_Bacteria	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148652.peg.626
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148652.peg.1625
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148652.peg.1038
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148652.peg.1143
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.148652.peg.1413
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148652.peg.1442
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148652.peg.1799
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148652.peg.1154
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148652.peg.467
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148652.peg.781
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148652.peg.1635
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148652.peg.759
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148652.peg.1554
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148652.peg.1139
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148652.peg.1295
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148652.peg.1689
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.148652.peg.1140
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148652.peg.1442
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148652.peg.1799
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148652.peg.1154
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148652.peg.467
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148652.peg.1635
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148652.peg.1554
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148652.peg.1139
tRNAs	tRNA-Ala-GGC	fig|6666666.148652.rna.3
tRNAs	tRNA-Arg-ACG	fig|6666666.148652.rna.4
tRNAs	tRNA-Arg-ACG	fig|6666666.148652.rna.5
tRNAs	tRNA-Arg-CCG	fig|6666666.148652.rna.26
tRNAs	tRNA-Cys-GCA	fig|6666666.148652.rna.38
tRNAs	tRNA-Gly-CCC	fig|6666666.148652.rna.27
tRNAs	tRNA-Gly-GCC	fig|6666666.148652.rna.37
tRNAs	tRNA-Gly-GCC	fig|6666666.148652.rna.39
tRNAs	tRNA-Leu-CAA	fig|6666666.148652.rna.47
tRNAs	tRNA-Leu-CAG	fig|6666666.148652.rna.40
tRNAs	tRNA-Leu-GAG	fig|6666666.148652.rna.41
tRNAs	tRNA-Phe-GAA	fig|6666666.148652.rna.19
tRNAs	tRNA-Pro-CGG	fig|6666666.148652.rna.17
tRNAs	tRNA-Pro-GGG	fig|6666666.148652.rna.1
tRNAs	tRNA-Ser-GGA	fig|6666666.148652.rna.14
tRNAs	tRNA-Trp-CCA	fig|6666666.148652.rna.46
