16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148657.peg.669
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.148657.peg.668
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148657.peg.1921
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.148657.peg.667
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.148657.peg.1264
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148657.peg.1132
5-FCL-like_protein	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148657.peg.1806
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148657.peg.1080
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148657.peg.1683
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148657.peg.780
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148657.peg.262
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148657.peg.969
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148657.peg.965
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148657.peg.1774
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148657.peg.1917
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148657.peg.567
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148657.peg.1486
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148657.peg.90
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148657.peg.1191
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148657.peg.219
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148657.peg.13
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148657.peg.566
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148657.peg.877
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148657.peg.1168
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148657.peg.1196
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148657.peg.1265
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148657.peg.1355
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148657.peg.1599
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148657.peg.1965
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148657.peg.608
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148657.peg.700
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.148657.peg.656
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148657.peg.1867
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148657.peg.1204
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148657.peg.1802
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148657.peg.1803
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148657.peg.1802
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148657.peg.1816
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148657.peg.1807
Acetyl-CoA_fermentation_to_Butyrate	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148657.peg.1806
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148657.peg.33
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148657.peg.1804
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148657.peg.34
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148657.peg.1805
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148657.peg.1281
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148657.peg.61
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148657.peg.1930
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148657.peg.1281
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.148657.peg.1727
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.148657.peg.1728
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatC	fig|6666666.148657.peg.1729
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatD	fig|6666666.148657.peg.1730
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatE	fig|6666666.148657.peg.1731
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.148657.peg.1724
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.148657.peg.1725
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.148657.peg.1786
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148657.peg.1915
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148657.peg.1021
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148657.peg.1619
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.148657.peg.69
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148657.peg.1127
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148657.peg.1568
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148657.peg.740
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148657.peg.1241
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.148657.peg.1871
Ammonia_assimilation	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.148657.peg.1376
Anaerobic_respiratory_reductases	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148657.peg.1806
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148657.peg.41
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148657.peg.686
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148657.peg.41
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148657.peg.686
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148657.peg.41
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148657.peg.686
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148657.peg.1458
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148657.peg.1458
Arginine_and_Ornithine_Degradation	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148657.peg.1855
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148657.peg.1458
Arginine_and_Ornithine_Degradation	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148657.peg.1162
Arginine_and_Ornithine_Degradation	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148657.peg.1854
Arginine_and_Ornithine_Degradation	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148657.peg.1164
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.148657.peg.622
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148657.peg.483
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148657.peg.482
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148657.peg.1280
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148657.peg.442
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.148657.peg.677
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148657.peg.1095
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148657.peg.669
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.148657.peg.81
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.148657.peg.668
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.148657.peg.676
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.148657.peg.673
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.148657.peg.1685
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148657.peg.678
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.148657.peg.1098
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.148657.peg.513
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148657.peg.1853
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148657.peg.343
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.148657.peg.170
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.148657.peg.1918
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.148657.peg.1919
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.148657.peg.1920
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.148657.peg.465
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.148657.peg.528
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148657.peg.1862
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.148657.peg.667
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148657.peg.442
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.148657.peg.677
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148657.peg.669
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.148657.peg.81
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.148657.peg.668
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.148657.peg.676
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.148657.peg.673
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148657.peg.678
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148657.peg.1853
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148657.peg.1852
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.148657.peg.1918
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.148657.peg.1919
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.148657.peg.1920
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.148657.peg.1922
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.148657.peg.465
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.148657.peg.528
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.148657.peg.1853
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.148657.peg.1852
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.148657.peg.81
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148657.peg.732
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148657.peg.1074
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148657.peg.26
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.148657.peg.1057
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148657.peg.35
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148657.peg.592
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.148657.peg.736
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148657.peg.1921
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.148657.peg.1918
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.148657.peg.1919
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.148657.peg.1920
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.148657.peg.1922
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.148657.peg.465
Bacterial_cell_division_cluster	Septum site-determining protein MinD	fig|6666666.148657.peg.528
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.148657.peg.1733
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.148657.peg.1733
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148657.peg.1789
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148657.peg.1862
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148657.peg.1775
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148657.peg.445
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148657.peg.552
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148657.peg.1338
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148657.peg.260
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148657.peg.1610
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148657.peg.234
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.148657.peg.235
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.148657.peg.1312
Biotin_biosynthesis	Biotin synthesis protein BioG	fig|6666666.148657.peg.1313
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148657.peg.1744
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148657.peg.633
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148657.peg.14
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148657.peg.1421
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148657.peg.552
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148657.peg.1338
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148657.peg.234
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.148657.peg.235
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.148657.peg.1312
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioG	fig|6666666.148657.peg.1313
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148657.peg.1869
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148657.peg.633
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148657.peg.552
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148657.peg.1338
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148657.peg.260
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148657.peg.1610
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148657.peg.234
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.148657.peg.235
Biotin_synthesis_cluster	Biotin synthesis protein BioC	fig|6666666.148657.peg.1312
Biotin_synthesis_cluster	Biotin synthesis protein BioG	fig|6666666.148657.peg.1313
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148657.peg.1744
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148657.peg.1869
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148657.peg.633
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148657.peg.14
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148657.peg.1421
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148657.peg.1791
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.148657.peg.712
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.148657.peg.1252
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148657.peg.1688
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.148657.peg.46
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.148657.peg.981
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.148657.peg.980
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148657.peg.67
CBSS-176280.1.peg.1561	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148657.peg.527
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148657.peg.85
CBSS-176280.1.peg.1561	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148657.peg.50
CBSS-196620.1.peg.2477	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148657.peg.86
CBSS-196620.1.peg.2477	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148657.peg.1162
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148657.peg.1232
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148657.peg.1455
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.148657.peg.795
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.148657.peg.571
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.148657.peg.571
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148657.peg.1503
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148657.peg.1689
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148657.peg.1279
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.148657.peg.656
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148657.peg.1867
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148657.peg.1835
CBSS-226186.1.peg.3978	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148657.peg.1327
CBSS-226186.1.peg.3978	FIG032012: hypothetical protein	fig|6666666.148657.peg.1326
CBSS-226186.1.peg.3978	FIG036016: hypothetical protein	fig|6666666.148657.peg.1325
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148657.peg.875
CBSS-226186.1.peg.4416	Cell division ZapA family protein	fig|6666666.148657.peg.874
CBSS-226186.1.peg.4416	FIG034863: hypothetical protein	fig|6666666.148657.peg.873
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148657.peg.432
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.148657.peg.1801
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148657.peg.597
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148657.peg.1327
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148657.peg.928
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148657.peg.1327
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148657.peg.928
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.148657.peg.171
CBSS-296591.1.peg.2330	NAD-dependent epimerase/dehydratase family protein	fig|6666666.148657.peg.401
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148657.peg.948
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148657.peg.1706
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148657.peg.363
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.148657.peg.901
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.148657.peg.900
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148657.peg.1528
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.148657.peg.519
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148657.peg.612
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148657.peg.1490
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.148657.peg.1642
CBSS-316407.3.peg.1371	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.148657.peg.1094
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148657.peg.1281
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148657.peg.1281
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.148657.peg.1942
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148657.peg.290
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.148657.peg.291
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148657.peg.1100
CBSS-326442.4.peg.1852	LSU m5C1962 methyltransferase RlmI	fig|6666666.148657.peg.932
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148657.peg.979
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148657.peg.1850
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148657.peg.929
CBSS-342610.3.peg.283	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148657.peg.527
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148657.peg.332
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148657.peg.542
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148657.peg.1328
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.148657.peg.1754
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148657.peg.343
CBSS-354.1.peg.2917	FIG003879: Predicted amidohydrolase	fig|6666666.148657.peg.507
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.148657.peg.1919
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.148657.peg.1920
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.148657.peg.465
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148657.peg.615
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148657.peg.1741
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148657.peg.1461
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.148657.peg.346
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148657.peg.794
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148657.peg.1021
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.148657.peg.358
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148657.peg.284
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148657.peg.824
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.148657.peg.1736
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148657.peg.288
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148657.peg.194
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148657.peg.194
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.148657.peg.1173
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148657.peg.54
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148657.peg.521
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148657.peg.669
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148657.peg.1921
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148657.peg.1897
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.148657.peg.1348
CBSS-83333.1.peg.946	LSU m5C1962 methyltransferase RlmI	fig|6666666.148657.peg.932
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148657.peg.1021
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148657.peg.792
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148657.peg.1705
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148657.peg.740
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148657.peg.1241
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148657.peg.1283
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148657.peg.1074
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148657.peg.1832
CRISPRs	CRISPR-associated RecB family exonuclease Cas4a	fig|6666666.148657.peg.353
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.148657.peg.350
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.148657.peg.354
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.148657.peg.355
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.148657.peg.301
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148657.peg.302
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148657.peg.49
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148657.peg.1025
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148657.peg.1175
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148657.peg.1958
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148657.peg.1018
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148657.peg.1738
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.148657.peg.1019
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148657.peg.909
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148657.peg.42
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148657.peg.223
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148657.peg.1103
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148657.peg.1232
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148657.peg.1455
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.148657.peg.1590
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148657.peg.721
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148657.peg.1413
Capsular_Polysaccharides_Biosynthesis_and_Assembly	Tyrosine-protein kinase Wzc (EC 2.7.10.2)	fig|6666666.148657.peg.837
Capsular_heptose_biosynthesis	GDP-L-fucose synthetase (EC 1.1.1.271)	fig|6666666.148657.peg.1914
Capsular_heptose_biosynthesis	GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	fig|6666666.148657.peg.1913
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148657.peg.1708
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.148657.peg.1526
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148657.peg.41
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148657.peg.686
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148657.peg.41
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148657.peg.686
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.148657.peg.1048
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148657.peg.1853
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148657.peg.1852
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148657.peg.215
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148657.peg.447
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148657.peg.1133
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.148657.peg.878
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148657.peg.751
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.148657.peg.302
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.148657.peg.464
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.148657.peg.1292
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148657.peg.1293
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148657.peg.1320
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148657.peg.680
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148657.peg.442
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148657.peg.1095
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148657.peg.48
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148657.peg.1877
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148657.peg.1876
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.148657.peg.1228
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.148657.peg.558
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148657.peg.626
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148657.peg.1485
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148657.peg.781
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148657.peg.1474
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148657.peg.448
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148657.peg.1585
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148657.peg.1473
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148657.peg.436
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.148657.peg.1942
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148657.peg.1073
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148657.peg.197
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148657.peg.1073
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148657.peg.275
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148657.peg.1571
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148657.peg.1429
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148657.peg.1495
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148657.peg.1574
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148657.peg.1300
Cobalamin_synthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148657.peg.1573
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148657.peg.800
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148657.peg.1302
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148657.peg.1300
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148657.peg.1299
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148657.peg.1299
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148657.peg.1302
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148657.peg.1431
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148657.peg.1433
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148657.peg.1040
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148657.peg.1430
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148657.peg.1572
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148657.peg.477
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148657.peg.316
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148657.peg.648
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.148657.peg.244
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148657.peg.316
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148657.peg.648
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148657.peg.615
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.148657.peg.315
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.148657.peg.850
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.148657.peg.1070
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148657.peg.1750
Coenzyme_A_Biosynthesis	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148657.peg.1776
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.148657.peg.797
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148657.peg.802
Coenzyme_A_Biosynthesis	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148657.peg.828
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148657.peg.928
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.148657.peg.1135
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.148657.peg.1135
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148657.peg.1750
Coenzyme_A_Biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148657.peg.1776
Coenzyme_A_Biosynthesis_cluster	FIG137884: hypothetical protein	fig|6666666.148657.peg.467
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148657.peg.802
Coenzyme_A_Biosynthesis_cluster	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148657.peg.828
Coenzyme_B12_biosynthesis	Adenosylcobinamide amidohydrolase (EC 3.5.1.90)	fig|6666666.148657.peg.452
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148657.peg.1571
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148657.peg.1429
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148657.peg.1495
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148657.peg.1574
Coenzyme_B12_biosynthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148657.peg.1300
Coenzyme_B12_biosynthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148657.peg.1573
Coenzyme_B12_biosynthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148657.peg.800
Coenzyme_B12_biosynthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148657.peg.1302
Coenzyme_B12_biosynthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148657.peg.1300
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148657.peg.1299
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148657.peg.1299
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)	fig|6666666.148657.peg.1301
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)	fig|6666666.148657.peg.1301
Coenzyme_B12_biosynthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148657.peg.1302
Coenzyme_B12_biosynthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148657.peg.1431
Coenzyme_B12_biosynthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148657.peg.1433
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148657.peg.1040
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148657.peg.1430
Coenzyme_B12_biosynthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148657.peg.1572
Coenzyme_B12_biosynthesis	Predicted cobalt transporter in Bacteroides_Porphyromonas	fig|6666666.148657.peg.613
Coenzyme_B12_biosynthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148657.peg.477
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.148657.peg.479
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148657.peg.454
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148657.peg.480
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148657.peg.268
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)	fig|6666666.148657.peg.743
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148657.peg.599
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.148657.peg.437
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.148657.peg.391
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.148657.peg.584
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148657.peg.197
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148657.peg.1657
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148657.peg.206
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148657.peg.1609
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148657.peg.1658
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraD	fig|6666666.148657.peg.1659
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.148657.peg.1660
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.148657.peg.1663
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.148657.peg.1665
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.148657.peg.1666
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.148657.peg.1667
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.148657.peg.1668
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148657.peg.1670
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.148657.peg.1671
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148657.peg.1672
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148657.peg.1673
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.148657.peg.1655
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.148657.peg.1653
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148657.peg.204
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148657.peg.1607
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148657.peg.1608
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148657.peg.1656
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148657.peg.732
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148657.peg.1635
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.148657.peg.1377
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148657.peg.1283
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148657.peg.1074
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148657.peg.1620
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148657.peg.1084
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148657.peg.1738
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Serine/threonine protein kinase PrkC, regulator of stationary phase	fig|6666666.148657.peg.1654
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.148657.peg.1057
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148657.peg.35
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148657.peg.592
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148657.peg.1553
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.148657.peg.560
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148657.peg.86
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148657.peg.86
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.148657.peg.714
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.148657.peg.1589
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148657.peg.284
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148657.peg.824
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.148657.peg.846
Cysteine_Biosynthesis	Sulfate permease	fig|6666666.148657.peg.1032
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148657.peg.1127
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148657.peg.1568
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148657.peg.1127
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148657.peg.1568
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148657.peg.1018
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.148657.peg.346
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.148657.peg.1386
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.148657.peg.560
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148657.peg.638
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.148657.peg.1366
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148657.peg.215
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148657.peg.447
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.148657.peg.165
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148657.peg.1648
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148657.peg.1820
DNA_processing_cluster	Recombination protein RecR	fig|6666666.148657.peg.344
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.148657.peg.1463
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog in greater Bacteroides group	fig|6666666.148657.peg.1065
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.148657.peg.899
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.148657.peg.681
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148657.peg.67
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.148657.peg.1492
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.148657.peg.1511
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.148657.peg.736
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.148657.peg.1137
DNA_repair,_bacterial	DNA-cytosine methyltransferase (EC 2.1.1.37)	fig|6666666.148657.peg.208
DNA_repair,_bacterial	DNA-cytosine methyltransferase (EC 2.1.1.37)	fig|6666666.148657.peg.1650
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.148657.peg.281
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148657.peg.1761
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148657.peg.186
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148657.peg.724
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148657.peg.794
DNA_repair,_bacterial	RecA protein	fig|6666666.148657.peg.747
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.148657.peg.283
DNA_repair,_bacterial	Very-short-patch mismatch repair endonuclease (G-T specific)	fig|6666666.148657.peg.210
DNA_repair,_bacterial	Very-short-patch mismatch repair endonuclease (G-T specific)	fig|6666666.148657.peg.1652
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.148657.peg.869
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.148657.peg.321
DNA_repair,_bacterial_MutL-MutS_system	MutS domain protein, family 2	fig|6666666.148657.peg.1810
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.148657.peg.894
DNA_repair,_bacterial_RecBCD_pathway	RecD-like DNA helicase Atu2026	fig|6666666.148657.peg.1324
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.148657.peg.865
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.148657.peg.15
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.148657.peg.878
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.148657.peg.695
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.148657.peg.747
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.148657.peg.344
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.148657.peg.283
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148657.peg.638
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148657.peg.1461
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.148657.peg.321
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.148657.peg.593
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.148657.peg.747
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.148657.peg.1868
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148657.peg.1620
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.148657.peg.1048
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148657.peg.215
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148657.peg.447
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148657.peg.1133
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.148657.peg.878
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148657.peg.1876
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.148657.peg.879
DNA_structural_proteins,_bacterial	DNA-binding protein HU-beta	fig|6666666.148657.peg.1833
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.148657.peg.342
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148657.peg.1635
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148657.peg.1648
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148657.peg.1820
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148657.peg.215
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148657.peg.447
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148657.peg.1309
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148657.peg.929
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148657.peg.1766
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.148657.peg.303
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.148657.peg.1917
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.148657.peg.1145
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.148657.peg.520
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.148657.peg.195
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148657.peg.1917
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.148657.peg.657
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.148657.peg.997
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.148657.peg.997
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148657.peg.567
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148657.peg.1204
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.148657.peg.939
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.148657.peg.938
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148657.peg.305
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148657.peg.304
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.148657.peg.715
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148657.peg.1375
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148657.peg.1818
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.148657.peg.1817
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.148657.peg.506
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148657.peg.655
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.148657.peg.1763
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148657.peg.1633
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.148657.peg.684
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148657.peg.61
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148657.peg.1930
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.148657.peg.1291
Dimethylarginine_metabolism	NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)	fig|6666666.148657.peg.1510
Dimethylarginine_metabolism	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148657.peg.1164
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148657.peg.313
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148657.peg.1848
ECSIG4-SIG7	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148657.peg.1086
ECSIG4-SIG7	Organic solvent tolerance protein precursor	fig|6666666.148657.peg.618
ECSIG4-SIG7	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148657.peg.1846
ECSIG4-SIG7	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148657.peg.866
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.148657.peg.10
Entner-Doudoroff_Pathway	Glucokinase (EC 2.7.1.2)	fig|6666666.148657.peg.604
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148657.peg.1175
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148657.peg.1958
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148657.peg.1841
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.148657.peg.1801
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148657.peg.1799
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148657.peg.1800
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 1 family protein	fig|6666666.148657.peg.501
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148657.peg.1246
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148657.peg.1630
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148657.peg.653
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148657.peg.432
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	fig|6666666.148657.peg.569
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.148657.peg.169
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.148657.peg.568
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein	fig|6666666.148657.peg.1258
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	fig|6666666.148657.peg.162
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.148657.peg.1849
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148657.peg.1801
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148657.peg.1799
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148657.peg.1800
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.148657.peg.1801
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.148657.peg.1298
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148657.peg.1799
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148657.peg.1800
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.148657.peg.1778
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.148657.peg.1754
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.148657.peg.1778
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148657.peg.669
Flavodoxin	Flavodoxin	fig|6666666.148657.peg.1770
Flavodoxin	Flavodoxin 1	fig|6666666.148657.peg.1128
Flavodoxin	Flavodoxin 2	fig|6666666.148657.peg.330
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.148657.peg.330
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148657.peg.742
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148657.peg.1690
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148657.peg.1132
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148657.peg.1474
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148657.peg.1080
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148657.peg.1683
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.148657.peg.817
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148657.peg.245
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148657.peg.1734
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.148657.peg.817
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148657.peg.907
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148657.peg.448
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148657.peg.1585
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148657.peg.1473
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148657.peg.1079
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148657.peg.742
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148657.peg.1690
Folate_biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148657.peg.1776
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148657.peg.1095
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148657.peg.245
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148657.peg.1734
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148657.peg.907
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148657.peg.48
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148657.peg.802
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148657.peg.626
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148657.peg.407
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.148657.peg.1507
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148657.peg.1751
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148657.peg.1751
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148657.peg.407
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148657.peg.472
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148657.peg.473
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148657.peg.735
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.148657.peg.944
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.148657.peg.1030
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148657.peg.427
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148657.peg.268
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.148657.peg.607
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148657.peg.1575
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.148657.peg.1871
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.148657.peg.1376
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase I, cytoplasmic (EC 3.5.1.1)	fig|6666666.148657.peg.1178
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148657.peg.427
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148657.peg.1626
Glutathione:_Non-redox_reactions	Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis	fig|6666666.148657.peg.1321
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148657.peg.1127
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148657.peg.1568
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148657.peg.1116
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148657.peg.799
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148657.peg.428
Glycine_Biosynthesis	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.148657.peg.805
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148657.peg.1486
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148657.peg.799
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148657.peg.1705
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148657.peg.1905
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148657.peg.1127
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148657.peg.1568
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.148657.peg.519
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148657.peg.1322
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148657.peg.408
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148657.peg.408
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148657.peg.1904
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148657.peg.286
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148657.peg.461
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148657.peg.1438
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148657.peg.1486
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148657.peg.979
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148657.peg.1705
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148657.peg.780
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.148657.peg.519
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148657.peg.1322
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148657.peg.612
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148657.peg.1490
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148657.peg.1410
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148657.peg.1385
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148657.peg.27
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148657.peg.1964
Glycogen_metabolism	Putative glycogen debranching enzyme, archaeal type, TIGR01561	fig|6666666.148657.peg.1955
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148657.peg.1116
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.148657.peg.10
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148657.peg.49
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148657.peg.1025
Glycolysis_and_Gluconeogenesis	Glucokinase (EC 2.7.1.2)	fig|6666666.148657.peg.604
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148657.peg.58
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148657.peg.1175
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148657.peg.1958
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148657.peg.1841
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.148657.peg.1874
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148657.peg.1404
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148657.peg.909
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.148657.peg.10
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148657.peg.58
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148657.peg.1958
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148657.peg.1841
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148657.peg.1404
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148657.peg.909
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.148657.peg.695
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.148657.peg.170
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148657.peg.1122
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148657.peg.284
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148657.peg.824
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148657.peg.288
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148657.peg.194
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148657.peg.396
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.148657.peg.556
GroEL_GroES	Chaperone protein DnaK	fig|6666666.148657.peg.1239
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.148657.peg.297
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.148657.peg.298
GroEL_GroES	Heat shock protein GrpE	fig|6666666.148657.peg.557
Group_II_intron-associated_genes	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	fig|6666666.148657.peg.1662
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.148657.peg.556
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.148657.peg.1239
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.148657.peg.557
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148657.peg.804
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148657.peg.1746
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148657.peg.275
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148657.peg.221
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148657.peg.1876
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.148657.peg.434
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.148657.peg.1264
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148657.peg.1055
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.148657.peg.1277
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148657.peg.34
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148657.peg.1805
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148657.peg.42
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148657.peg.223
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148657.peg.1103
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.148657.peg.1838
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148657.peg.1712
Heme_and_Siroheme_Biosynthesis	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148657.peg.804
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.148657.peg.278
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148657.peg.42
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148657.peg.223
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148657.peg.1103
Hfl_operon	GTP-binding protein HflX	fig|6666666.148657.peg.1547
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148657.peg.1548
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148657.peg.965
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.148657.peg.970
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.148657.peg.966
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.148657.peg.1558
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5'-nucleotidase YjjG (EC 3.1.3.5)	fig|6666666.148657.peg.1266
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148657.peg.1124
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148657.peg.522
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148657.peg.1746
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.148657.peg.1056
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.148657.peg.1057
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148657.peg.483
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148657.peg.482
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.148657.peg.1489
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148657.peg.1635
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148657.peg.194
Inteins	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148657.peg.1760
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148657.peg.340
Inteins	Translation initiation factor 2	fig|6666666.148657.peg.1252
Inteins	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.148657.peg.1419
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148657.peg.1021
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148657.peg.1619
Iron-sulfur_cluster_assembly	Ferritin-like protein 2	fig|6666666.148657.peg.1912
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148657.peg.1249
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.148657.peg.1250
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.148657.peg.1248
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.148657.peg.555
Iron-sulfur_cluster_assembly	Sulfur acceptor protein SufE for iron-sulfur cluster assembly	fig|6666666.148657.peg.277
Iron-sulfur_cluster_assembly	Thiamin biosynthesis lipoprotein ApbE	fig|6666666.148657.peg.986
Isoleucine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148657.peg.1802
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148657.peg.1915
Isoleucine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148657.peg.1806
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148657.peg.41
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148657.peg.686
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148657.peg.54
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148657.peg.1058
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148657.peg.521
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148657.peg.1027
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148657.peg.187
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148657.peg.700
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148657.peg.925
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148657.peg.41
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148657.peg.686
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148657.peg.1897
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148657.peg.41
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148657.peg.686
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148657.peg.41
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148657.peg.686
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148657.peg.41
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148657.peg.686
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148657.peg.41
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148657.peg.686
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148657.peg.686
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148657.peg.1897
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148657.peg.608
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.148657.peg.466
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.148657.peg.1711
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.148657.peg.331
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148657.peg.652
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.148657.peg.405
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	fig|6666666.148657.peg.1054
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148657.peg.1125
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.148657.peg.228
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148657.peg.721
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148657.peg.1413
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.148657.peg.218
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148657.peg.554
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148657.peg.654
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.148657.peg.55
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.148657.peg.1181
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.148657.peg.1549
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148657.peg.1441
LMPTP_YfkJ_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148657.peg.527
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148657.peg.85
LOS_core_oligosaccharide_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.148657.peg.1711
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.148657.peg.885
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.148657.peg.887
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148657.peg.886
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148657.peg.884
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.148657.peg.889
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.148657.peg.888
Lactate_utilization	L-lactate permease	fig|6666666.148657.peg.496
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.148657.peg.1440
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148657.peg.1441
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518	fig|6666666.148657.peg.1442
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148657.peg.948
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148657.peg.76
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148657.peg.407
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148657.peg.472
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148657.peg.473
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148657.peg.735
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.148657.peg.77
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148657.peg.948
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148657.peg.472
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148657.peg.473
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148657.peg.735
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148657.peg.1832
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148657.peg.1915
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148657.peg.1915
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148657.peg.780
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-glucose 6-dehydrogenase (EC 1.1.1.22)	fig|6666666.148657.peg.1419
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.148657.peg.1274
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148657.peg.499
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.148657.peg.1274
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148657.peg.499
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148657.peg.714
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148657.peg.1741
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.148657.peg.783
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.148657.peg.1944
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.148657.peg.713
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148657.peg.653
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148657.peg.652
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148657.peg.1125
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148657.peg.1899
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148657.peg.1900
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148657.peg.1010
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148657.peg.1898
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148657.peg.554
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148657.peg.654
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.148657.peg.282
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.148657.peg.282
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148657.peg.1047
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148657.peg.690
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148657.peg.632
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148657.peg.666
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.148657.peg.1099
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148657.peg.1100
Lysine_Biosynthesis_DAP_Pathway	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148657.peg.784
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148657.peg.1047
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148657.peg.690
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148657.peg.632
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148657.peg.666
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.148657.peg.1099
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148657.peg.1100
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148657.peg.784
Lysine_degradation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148657.peg.1809
Lysine_degradation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148657.peg.1808
Lysine_degradation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148657.peg.1812
Lysine_fermentation	3,5-diaminohexanoate dehydrogenase (EC 1.4.1.11)	fig|6666666.148657.peg.1813
Lysine_fermentation	3-aminobutyryl-CoA ammonia-lyase (EC 4.3.1.14)	fig|6666666.148657.peg.1815
Lysine_fermentation	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148657.peg.1803
Lysine_fermentation	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148657.peg.1802
Lysine_fermentation	3-keto-5-aminohexanoate cleavage enzyme	fig|6666666.148657.peg.1814
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148657.peg.1816
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148657.peg.1807
Lysine_fermentation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148657.peg.1806
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148657.peg.33
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148657.peg.1804
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148657.peg.34
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148657.peg.1805
Lysine_fermentation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148657.peg.1809
Lysine_fermentation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148657.peg.1808
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148657.peg.1812
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148657.peg.305
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148657.peg.304
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148657.peg.332
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148657.peg.542
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148657.peg.1328
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.148657.peg.1754
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.148657.peg.893
Macromolecular_synthesis_operon	Transamidase GatB domain protein	fig|6666666.148657.peg.679
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148657.peg.592
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148657.peg.284
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148657.peg.824
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.148657.peg.1590
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.148657.peg.1845
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148657.peg.27
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148657.peg.76
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148657.peg.734
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148657.peg.1953
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148657.peg.1964
Maltose_and_Maltodextrin_Utilization	Predicted glucose transporter in maltodextrin utilization gene cluster	fig|6666666.148657.peg.1117
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148657.peg.729
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148657.peg.1288
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148657.peg.1289
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148657.peg.1504
Mannose_Metabolism	Beta-mannosidase (EC 3.2.1.25)	fig|6666666.148657.peg.1493
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)	fig|6666666.148657.peg.1061
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.148657.peg.813
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.148657.peg.1789
Melibiose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148657.peg.407
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.148657.peg.196
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148657.peg.792
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148657.peg.670
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148657.peg.1777
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148657.peg.1786
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148657.peg.1821
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148657.peg.1281
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148657.peg.1535
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148657.peg.1280
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.148657.peg.952
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148657.peg.261
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148657.peg.1281
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148657.peg.1535
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148657.peg.1280
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148657.peg.1281
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148657.peg.1626
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148657.peg.1861
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148657.peg.1361
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148657.peg.1055
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.148657.peg.853
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148657.peg.256
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148657.peg.1043
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.148657.peg.1773
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148657.peg.792
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148657.peg.1850
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148657.peg.1453
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148657.peg.883
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148657.peg.882
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.148657.peg.1342
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.148657.peg.1343
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.148657.peg.1344
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.148657.peg.387
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.148657.peg.386
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.148657.peg.385
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.148657.peg.890
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148657.peg.1721
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148657.peg.1722
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148657.peg.1723
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148657.peg.1485
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148657.peg.948
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148657.peg.593
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148657.peg.593
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.148657.peg.306
NAD_and_NADP_cofactor_biosynthesis_global	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148657.peg.1721
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.148657.peg.227
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.148657.peg.306
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148657.peg.487
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148657.peg.641
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.148657.peg.642
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148657.peg.1722
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148657.peg.1723
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.148657.peg.987
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.148657.peg.992
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.148657.peg.991
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.148657.peg.990
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.148657.peg.988
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.148657.peg.989
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.148657.peg.1105
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.148657.peg.1107
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.148657.peg.1108
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.148657.peg.1109
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.148657.peg.1110
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.148657.peg.1111
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase	fig|6666666.148657.peg.96
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Membrane protein associated with methylmalonyl-CoA decarboxylase	fig|6666666.148657.peg.93
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148657.peg.92
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148657.peg.97
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.148657.peg.97
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Na+/H+ antiporter NhaA type	fig|6666666.148657.peg.1554
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148657.peg.487
Nitrate_and_nitrite_ammonification	Cytochrome c nitrite reductase, small subunit NrfH	fig|6666666.148657.peg.7
Nitrate_and_nitrite_ammonification	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148657.peg.6
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148657.peg.1694
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.148657.peg.1448
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.148657.peg.737
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148657.peg.54
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148657.peg.1058
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148657.peg.521
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148657.peg.1027
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148657.peg.187
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148657.peg.700
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148657.peg.925
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.148657.peg.446
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148657.peg.522
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148657.peg.1254
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.148657.peg.712
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.148657.peg.1253
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.148657.peg.1252
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148657.peg.1132
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148657.peg.262
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148657.peg.969
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.148657.peg.1774
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148657.peg.1774
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.148657.peg.328
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.148657.peg.282
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.148657.peg.328
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148657.peg.1694
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.148657.peg.328
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.148657.peg.1031
Oxidative_stress	Rubrerythrin	fig|6666666.148657.peg.1901
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148657.peg.880
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148657.peg.1718
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148657.peg.1719
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148657.peg.1018
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148657.peg.1204
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148657.peg.1738
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.148657.peg.1507
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.148657.peg.1019
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148657.peg.242
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148657.peg.242
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148657.peg.669
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148657.peg.1601
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148657.peg.792
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148657.peg.1575
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148657.peg.50
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148657.peg.1921
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.148657.peg.671
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.148657.peg.1922
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148657.peg.498
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148657.peg.56
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148657.peg.674
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148657.peg.675
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148657.peg.672
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148657.peg.670
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148657.peg.1777
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148657.peg.1786
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148657.peg.1601
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148657.peg.675
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148657.peg.672
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148657.peg.670
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148657.peg.1777
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148657.peg.1786
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.148657.peg.1581
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148657.peg.1578
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148657.peg.1580
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148657.peg.585
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148657.peg.866
Periplasmic_Stress_Response	HtrA protease/chaperone protein	fig|6666666.148657.peg.1753
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148657.peg.1899
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148657.peg.1900
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148657.peg.866
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148657.peg.445
Persister_Cells	Cell division inhibitor	fig|6666666.148657.peg.1348
Persister_Cells	HipA protein	fig|6666666.148657.peg.772
Phage_packaging_machinery	Phage terminase, large subunit	fig|6666666.148657.peg.151
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.148657.peg.743
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148657.peg.293
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148657.peg.739
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.148657.peg.399
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148657.peg.606
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148657.peg.271
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148657.peg.272
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148657.peg.194
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148657.peg.194
Phosphate_metabolism	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148657.peg.1548
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.148657.peg.264
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.148657.peg.112
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148657.peg.1495
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148657.peg.1574
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148657.peg.1841
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148657.peg.1705
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148657.peg.780
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148657.peg.1127
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148657.peg.1568
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.148657.peg.519
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148657.peg.1322
Photorespiration_(oxidative_C2_cycle)	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148657.peg.1116
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148657.peg.1486
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148657.peg.1853
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148657.peg.1852
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148657.peg.1575
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148657.peg.26
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148657.peg.779
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148657.peg.1281
Polyamine_Metabolism	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148657.peg.1855
Polyamine_Metabolism	Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-)	fig|6666666.148657.peg.1863
Polyamine_Metabolism	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148657.peg.1854
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148657.peg.1802
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148657.peg.1803
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148657.peg.1802
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148657.peg.1816
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148657.peg.1816
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148657.peg.1807
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148657.peg.606
Polyphosphate	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148657.peg.1548
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148657.peg.41
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148657.peg.686
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148657.peg.41
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148657.peg.686
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148657.peg.686
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148657.peg.1897
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148657.peg.1578
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148657.peg.1580
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148657.peg.585
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.148657.peg.270
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148657.peg.1056
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148657.peg.1056
Potassium_homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.148657.peg.1373
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148657.peg.1057
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148657.peg.1057
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.148657.peg.1420
Programmed_frameshift	programmed frameshift-containing	fig|6666666.148657.peg.1420
Proline,_4-hydroxyproline_uptake_and_utilization	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148657.peg.1162
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148657.peg.1799
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148657.peg.1800
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148657.peg.92
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148657.peg.97
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA epimerase (EC 5.1.99.1)	fig|6666666.148657.peg.91
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.148657.peg.1209
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148657.peg.1694
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.148657.peg.556
Protein_chaperones	Chaperone protein DnaK	fig|6666666.148657.peg.1239
Protein_chaperones	Chaperone protein HtpG	fig|6666666.148657.peg.1093
Protein_chaperones	ClpB protein	fig|6666666.148657.peg.1089
Protein_chaperones	ClpB protein	fig|6666666.148657.peg.1771
Protein_chaperones	Heat shock protein GrpE	fig|6666666.148657.peg.557
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148657.peg.85
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148657.peg.1380
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148657.peg.1748
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148657.peg.581
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148657.peg.1381
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148657.peg.1042
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.148657.peg.864
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.148657.peg.863
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.148657.peg.912
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148657.peg.1089
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148657.peg.1771
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.148657.peg.1511
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148657.peg.686
Protocatechuate_branch_of_beta-ketoadipate_pathway	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.148657.peg.193
Protocatechuate_branch_of_beta-ketoadipate_pathway	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.148657.peg.1637
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.148657.peg.236
Purine_Utilization	Xanthine permease	fig|6666666.148657.peg.176
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.148657.peg.699
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148657.peg.875
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148657.peg.1881
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.148657.peg.517
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.148657.peg.47
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148657.peg.1766
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.148657.peg.816
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148657.peg.1751
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148657.peg.1751
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148657.peg.290
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148657.peg.48
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148657.peg.300
Purine_conversions	Nucleotide pyrophosphatase (EC 3.6.1.9)	fig|6666666.148657.peg.1837
Purine_conversions	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148657.peg.1548
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148657.peg.61
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148657.peg.1930
Purine_conversions	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148657.peg.175
Purine_conversions	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148657.peg.691
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148657.peg.1761
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148657.peg.186
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148657.peg.1751
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148657.peg.1751
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148657.peg.300
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148657.peg.242
Pyrene_degradation	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.148657.peg.193
Pyrene_degradation	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.148657.peg.1637
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148657.peg.1058
Pyridoxin_(Vitamin_B6)_Biosynthesis	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148657.peg.1086
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148657.peg.1905
Pyridoxin_(Vitamin_B6)_Biosynthesis	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)	fig|6666666.148657.peg.417
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148657.peg.1175
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148657.peg.1904
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.148657.peg.1286
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)	fig|6666666.148657.peg.226
Pyrimidine_utilization	Uracil permease	fig|6666666.148657.peg.1763
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148657.peg.261
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.148657.peg.1786
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148657.peg.1915
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148657.peg.408
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148657.peg.408
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.148657.peg.1016
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.148657.peg.97
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.148657.peg.1959
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148657.peg.1404
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148657.peg.1801
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative	fig|6666666.148657.peg.269
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148657.peg.1045
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148657.peg.1799
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148657.peg.1800
Queuosine-Archaeosine_Biosynthesis	Epoxyqueuosine (oQ) reductase QueG	fig|6666666.148657.peg.809
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148657.peg.907
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148657.peg.423
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148657.peg.823
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.148657.peg.1318
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148657.peg.1445
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148657.peg.1446
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148657.peg.1503
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148657.peg.1689
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148657.peg.1279
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148657.peg.599
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148657.peg.1327
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.148657.peg.1138
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148657.peg.241
RNA_methylation	LSU m5C1962 methyltransferase RlmI	fig|6666666.148657.peg.932
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148657.peg.1084
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148657.peg.275
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148657.peg.1846
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148657.peg.1320
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148657.peg.1374
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.148657.peg.1779
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148657.peg.529
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148657.peg.1625
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.148657.peg.280
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148657.peg.1853
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148657.peg.1852
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148657.peg.751
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148657.peg.1320
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148657.peg.680
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148657.peg.751
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148657.peg.302
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.148657.peg.464
RNA_modification_cluster	Protein YidD	fig|6666666.148657.peg.1292
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148657.peg.1293
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.148657.peg.357
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148657.peg.883
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148657.peg.882
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.148657.peg.1269
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148657.peg.343
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148657.peg.1791
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.148657.peg.570
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148657.peg.1767
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148657.peg.444
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148657.peg.1602
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148657.peg.431
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148657.peg.1636
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148657.peg.1688
RecA_and_RecX	RecA protein	fig|6666666.148657.peg.747
RecA_and_RecX	Regulatory protein RecX	fig|6666666.148657.peg.1868
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148657.peg.313
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148657.peg.1848
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148657.peg.1453
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148657.peg.1175
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148657.peg.1045
Redox-dependent_regulation_of_nucleus_processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148657.peg.487
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148657.peg.641
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.148657.peg.307
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148657.peg.215
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148657.peg.447
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148657.peg.1309
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148657.peg.929
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148657.peg.1885
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148657.peg.1886
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.148657.peg.768
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.148657.peg.770
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148657.peg.764
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148657.peg.766
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148657.peg.1709
Rhamnose_containing_glycans	Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)	fig|6666666.148657.peg.1087
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148657.peg.948
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.148657.peg.1418
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.148657.peg.1827
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148657.peg.1708
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148657.peg.1707
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148657.peg.1706
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148657.peg.1759
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148657.peg.1866
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148657.peg.182
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148657.peg.1866
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148657.peg.526
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148657.peg.1759
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148657.peg.526
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148657.peg.1617
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148657.peg.1759
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148657.peg.1866
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148657.peg.182
Riboflavin,_FMN_and_FAD_metabolism_in_plants	C-terminal domain of CinA type S	fig|6666666.148657.peg.593
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148657.peg.1866
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.148657.peg.319
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148657.peg.526
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148657.peg.1759
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148657.peg.256
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148657.peg.1043
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148657.peg.526
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148657.peg.1617
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148657.peg.1688
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148657.peg.1759
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148657.peg.1866
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148657.peg.182
Riboflavin_synthesis_cluster	C-terminal domain of CinA type S	fig|6666666.148657.peg.593
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148657.peg.1866
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148657.peg.1759
Riboflavin_synthesis_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148657.peg.527
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148657.peg.1885
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148657.peg.1886
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148657.peg.655
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148657.peg.1617
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148657.peg.1738
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148657.peg.219
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.148657.peg.785
Ribonuclease_H	Ribonuclease HI-related protein 3	fig|6666666.148657.peg.1244
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148657.peg.1620
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148657.peg.1620
Ribonucleotide_reduction	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148657.peg.1760
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.148657.peg.341
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148657.peg.340
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148657.peg.1861
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.148657.peg.387
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148657.peg.1147
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.148657.peg.366
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.148657.peg.885
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.148657.peg.887
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.148657.peg.903
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.148657.peg.373
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.148657.peg.365
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.148657.peg.376
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.148657.peg.356
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.148657.peg.367
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.148657.peg.1488
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148657.peg.886
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.148657.peg.1342
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.148657.peg.981
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.148657.peg.378
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.148657.peg.381
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.148657.peg.372
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.148657.peg.1878
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.148657.peg.980
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.148657.peg.113
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.148657.peg.375
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.148657.peg.380
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.148657.peg.1752
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.148657.peg.1752
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.148657.peg.168
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.148657.peg.114
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.148657.peg.114
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.148657.peg.464
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.148657.peg.1343
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.148657.peg.361
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.148657.peg.383
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.148657.peg.382
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.148657.peg.371
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.148657.peg.368
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148657.peg.884
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.148657.peg.1757
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.148657.peg.384
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.148657.peg.359
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.148657.peg.387
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.148657.peg.360
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.148657.peg.370
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.148657.peg.370
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.148657.peg.576
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.148657.peg.1181
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.148657.peg.374
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.148657.peg.1756
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.148657.peg.1756
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.148657.peg.379
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.148657.peg.1228
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.148657.peg.591
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.148657.peg.893
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.148657.peg.901
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.148657.peg.377
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.148657.peg.358
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.148657.peg.366
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.148657.peg.1755
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.148657.peg.386
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.148657.peg.369
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.148657.peg.902
Ribosome_activity_modulation	Ribosome hibernation protein YhbH	fig|6666666.148657.peg.892
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.148657.peg.55
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148657.peg.241
Ribosome_biogenesis_bacterial	LSU m5C1962 methyltransferase RlmI	fig|6666666.148657.peg.932
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148657.peg.444
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148657.peg.1602
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148657.peg.221
Ribosome_biogenesis_bacterial	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148657.peg.1147
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148657.peg.1846
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148657.peg.431
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148657.peg.35
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148657.peg.1374
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148657.peg.1042
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.148657.peg.1529
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.148657.peg.901
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.148657.peg.900
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148657.peg.1528
Rubrerythrin	Rubrerythrin	fig|6666666.148657.peg.1901
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.148657.peg.265
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.148657.peg.319
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.148657.peg.788
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.148657.peg.1223
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.148657.peg.1030
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148657.peg.1023
Selenocysteine_metabolism	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148657.peg.1546
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.148657.peg.528
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148657.peg.1905
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148657.peg.1904
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148657.peg.286
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148657.peg.461
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148657.peg.1438
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148657.peg.286
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148657.peg.461
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148657.peg.1438
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148657.peg.1486
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.148657.peg.1924
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148657.peg.1741
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148657.peg.1741
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148657.peg.688
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148657.peg.689
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148657.peg.6
Spore_Core_Dehydration	Spore maturation protein A-like protein	fig|6666666.148657.peg.289
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148657.peg.1877
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.148657.peg.297
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.148657.peg.1756
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.148657.peg.1277
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.148657.peg.1250
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148657.peg.1027
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148657.peg.187
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148657.peg.1124
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148657.peg.442
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.148657.peg.668
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.148657.peg.1525
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.148657.peg.339
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.148657.peg.339
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.148657.peg.88
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148657.peg.89
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148657.peg.90
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148657.peg.780
TCA_Cycle	Fumarate hydratase class I (EC 4.2.1.2)	fig|6666666.148657.peg.164
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148657.peg.396
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148657.peg.89
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148657.peg.90
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148657.peg.187
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148657.peg.1821
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148657.peg.731
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148657.peg.732
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148657.peg.731
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148657.peg.732
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.148657.peg.385
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.148657.peg.385
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148657.peg.1058
Thiamin_biosynthesis	Predicted thiamin transporter PnuT	fig|6666666.148657.peg.1533
Thiamin_biosynthesis	Sulfur carrier protein ThiS	fig|6666666.148657.peg.1189
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.148657.peg.829
Thiamin_biosynthesis	Thiamin biosynthesis protein ThiC	fig|6666666.148657.peg.1190
Thiamin_biosynthesis	Thiamin pyrophosphokinase (EC 2.7.6.2)	fig|6666666.148657.peg.1534
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148657.peg.1191
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148657.peg.161
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148657.peg.1531
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148657.peg.1532
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148657.peg.219
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.148657.peg.1192
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiH	fig|6666666.148657.peg.1193
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.148657.peg.914
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	fig|6666666.148657.peg.913
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.148657.peg.282
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.148657.peg.748
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148657.peg.597
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148657.peg.1410
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.148657.peg.1801
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148657.peg.1799
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148657.peg.1800
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148657.peg.268
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148657.peg.666
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.148657.peg.1099
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148657.peg.428
Threonine_degradation	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.148657.peg.805
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.148657.peg.1692
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.148657.peg.224
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148657.peg.42
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148657.peg.223
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148657.peg.1103
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148657.peg.39
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148657.peg.225
Ton_and_Tol_transport_systems	Outer membrane lipoprotein omp16 precursor	fig|6666666.148657.peg.1444
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148657.peg.451
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148657.peg.476
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148657.peg.694
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148657.peg.1577
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148657.peg.1700
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148657.peg.1254
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.148657.peg.888
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.148657.peg.1947
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.148657.peg.962
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.148657.peg.1253
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.148657.peg.785
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.148657.peg.558
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.148657.peg.1754
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.148657.peg.1778
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.148657.peg.385
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.148657.peg.702
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.148657.peg.1938
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.148657.peg.385
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.148657.peg.702
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.148657.peg.434
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.148657.peg.1938
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.148657.peg.900
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.148657.peg.890
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148657.peg.1283
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.148657.peg.712
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.148657.peg.362
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.148657.peg.1252
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.148657.peg.1344
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.148657.peg.1259
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148657.peg.363
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.148657.peg.656
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.148657.peg.1420
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.148657.peg.1297
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148657.peg.1074
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148657.peg.1877
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148657.peg.1867
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.148657.peg.1529
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.148657.peg.1277
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148657.peg.1835
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.148657.peg.1056
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148657.peg.1385
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148657.peg.734
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148657.peg.1953
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148657.peg.1037
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148657.peg.1628
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.148657.peg.768
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.148657.peg.770
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148657.peg.764
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.148657.peg.766
Type_VI_secretion_systems	ClpB protein	fig|6666666.148657.peg.1089
Type_VI_secretion_systems	ClpB protein	fig|6666666.148657.peg.1771
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148657.peg.1789
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148657.peg.498
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148657.peg.56
USS-DB-7	ClpB protein	fig|6666666.148657.peg.1089
USS-DB-7	ClpB protein	fig|6666666.148657.peg.1771
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.148657.peg.1096
Universal_GTPases	GTP-binding protein EngA	fig|6666666.148657.peg.171
Universal_GTPases	GTP-binding protein EngB	fig|6666666.148657.peg.949
Universal_GTPases	GTP-binding protein Era	fig|6666666.148657.peg.170
Universal_GTPases	GTP-binding protein HflX	fig|6666666.148657.peg.1547
Universal_GTPases	GTP-binding protein Obg	fig|6666666.148657.peg.46
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.148657.peg.917
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148657.peg.751
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.148657.peg.1530
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148657.peg.1862
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148657.peg.1775
Universal_GTPases	Translation elongation factor G	fig|6666666.148657.peg.385
Universal_GTPases	Translation elongation factor LepA	fig|6666666.148657.peg.434
Universal_GTPases	Translation elongation factor Tu	fig|6666666.148657.peg.890
Universal_GTPases	Translation initiation factor 2	fig|6666666.148657.peg.1252
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148657.peg.242
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148657.peg.1025
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.148657.peg.81
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148657.peg.724
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.148657.peg.1366
V-Type_ATP_synthase	V-type ATP synthase subunit A (EC 3.6.3.14)	fig|6666666.148657.peg.1394
V-Type_ATP_synthase	V-type ATP synthase subunit B (EC 3.6.3.14)	fig|6666666.148657.peg.1395
V-Type_ATP_synthase	V-type ATP synthase subunit C (EC 3.6.3.14)	fig|6666666.148657.peg.1393
V-Type_ATP_synthase	V-type ATP synthase subunit D (EC 3.6.3.14)	fig|6666666.148657.peg.1396
V-Type_ATP_synthase	V-type ATP synthase subunit E (EC 3.6.3.14)	fig|6666666.148657.peg.1392
V-Type_ATP_synthase	V-type ATP synthase subunit I (EC 3.6.3.14)	fig|6666666.148657.peg.1397
V-Type_ATP_synthase	V-type ATP synthase subunit K (EC 3.6.3.14)	fig|6666666.148657.peg.1398
Valine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148657.peg.1802
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148657.peg.1915
Valine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148657.peg.1806
Xanthine_Metabolism_in_Bacteria	Xanthine permease	fig|6666666.148657.peg.176
Xanthine_Metabolism_in_Bacteria	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148657.peg.175
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.148657.peg.40
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.148657.peg.1291
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148657.peg.35
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148657.peg.592
YjeE	NAD(P)HX dehydratase	fig|6666666.148657.peg.651
YjeE	NAD(P)HX epimerase	fig|6666666.148657.peg.651
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148657.peg.35
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148657.peg.708
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.148657.peg.863
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.148657.peg.677
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.148657.peg.676
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.148657.peg.673
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148657.peg.678
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148657.peg.1601
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148657.peg.675
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.148657.peg.677
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.148657.peg.676
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148657.peg.678
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148657.peg.674
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148657.peg.691
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148657.peg.1709
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148657.peg.1708
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148657.peg.1707
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148657.peg.1706
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148657.peg.1021
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148657.peg.1619
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148657.peg.751
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148657.peg.680
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148657.peg.1802
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148657.peg.14
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148657.peg.1421
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148657.peg.1635
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.148657.peg.283
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148657.peg.875
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148657.peg.1881
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.148657.peg.301
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148657.peg.1155
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.148657.peg.926
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148657.peg.61
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148657.peg.1930
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148657.peg.1410
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.148657.peg.710
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148657.peg.1079
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148657.peg.1633
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148657.peg.551
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148657.peg.610
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148657.peg.1759
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148657.peg.526
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148657.peg.526
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148657.peg.1617
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148657.peg.714
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.148657.peg.714
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148657.peg.284
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148657.peg.824
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148657.peg.288
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148657.peg.194
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148657.peg.194
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148657.peg.1361
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148657.peg.436
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.148657.peg.279
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.148657.peg.1768
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.148657.peg.1864
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148657.peg.1553
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.148657.peg.398
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148657.peg.1712
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148657.peg.1122
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.148657.peg.1081
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.148657.peg.1739
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.148657.peg.52
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.148657.peg.60
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.148657.peg.1880
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.148657.peg.561
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.148657.peg.318
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.148657.peg.1497
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type	fig|6666666.148657.peg.531
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148657.peg.979
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.148657.peg.1345
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.148657.peg.239
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.148657.peg.1247
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.148657.peg.1408
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148657.peg.1021
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148657.peg.1619
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148657.peg.1155
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.148657.peg.1942
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.148657.peg.624
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148657.peg.907
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148657.peg.751
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148657.peg.1249
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.148657.peg.1250
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.148657.peg.1248
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148657.peg.241
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.148657.peg.1318
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148657.peg.1445
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148657.peg.1446
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148657.peg.1503
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148657.peg.1689
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148657.peg.1023
tRNA_modification_Bacteria	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148657.peg.1546
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148657.peg.1374
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148657.peg.529
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148657.peg.1625
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.148657.peg.1033
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148657.peg.299
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148657.peg.959
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148657.peg.1636
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148657.peg.1688
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148657.peg.680
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148657.peg.626
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148657.peg.1279
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148657.peg.1361
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148657.peg.1622
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148657.peg.779
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148657.peg.1293
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.148657.peg.1623
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148657.peg.299
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148657.peg.959
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148657.peg.1636
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148657.peg.1688
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148657.peg.626
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148657.peg.1361
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148657.peg.1622
tRNAs	tRNA-Ala-GGC	fig|6666666.148657.rna.25
tRNAs	tRNA-Arg-ACG	fig|6666666.148657.rna.47
tRNAs	tRNA-Arg-ACG	fig|6666666.148657.rna.48
tRNAs	tRNA-Arg-CCG	fig|6666666.148657.rna.44
tRNAs	tRNA-Cys-GCA	fig|6666666.148657.rna.34
tRNAs	tRNA-Gly-CCC	fig|6666666.148657.rna.27
tRNAs	tRNA-Gly-GCC	fig|6666666.148657.rna.11
tRNAs	tRNA-Gly-GCC	fig|6666666.148657.rna.35
tRNAs	tRNA-Leu-CAA	fig|6666666.148657.rna.19
tRNAs	tRNA-Leu-CAG	fig|6666666.148657.rna.36
tRNAs	tRNA-Leu-GAG	fig|6666666.148657.rna.37
tRNAs	tRNA-Phe-GAA	fig|6666666.148657.rna.5
tRNAs	tRNA-Pro-CGG	fig|6666666.148657.rna.6
tRNAs	tRNA-Pro-GGG	fig|6666666.148657.rna.13
tRNAs	tRNA-Ser-GGA	fig|6666666.148657.rna.3
tRNAs	tRNA-Trp-CCA	fig|6666666.148657.rna.28
