16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148659.peg.549
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.148659.peg.548
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148659.peg.1347
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.148659.peg.547
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.148659.peg.238
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148659.peg.1784
5-FCL-like_protein	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148659.peg.1033
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148659.peg.1995
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148659.peg.767
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148659.peg.1268
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148659.peg.313
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148659.peg.317
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148659.peg.1076
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148659.peg.1351
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148659.peg.1697
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148659.peg.41
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148659.peg.1555
5-FCL-like_protein	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148659.peg.2044
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148659.peg.609
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148659.peg.237
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148659.peg.383
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148659.peg.665
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148659.peg.694
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148659.peg.786
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148659.peg.962
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148659.peg.1072
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148659.peg.1400
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148659.peg.1698
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148659.peg.1758
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148659.peg.2040
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.148659.peg.2070
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148659.peg.1676
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148659.peg.897
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.148659.peg.72
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148659.peg.152
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148659.peg.2031
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148659.peg.1037
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148659.peg.1036
Acetyl-CoA_fermentation_to_Butyrate	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148659.peg.1037
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148659.peg.1023
Acetyl-CoA_fermentation_to_Butyrate	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148659.peg.1032
Acetyl-CoA_fermentation_to_Butyrate	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148659.peg.1033
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148659.peg.740
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, alpha subunit	fig|6666666.148659.peg.1035
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148659.peg.741
Acetyl-CoA_fermentation_to_Butyrate	Electron transfer flavoprotein, beta subunit	fig|6666666.148659.peg.1034
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148659.peg.476
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148659.peg.535
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148659.peg.1323
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148659.peg.476
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.148659.peg.1525
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.148659.peg.1526
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatC	fig|6666666.148659.peg.1527
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatD	fig|6666666.148659.peg.1528
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatE	fig|6666666.148659.peg.1529
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.148659.peg.1522
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.148659.peg.1523
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.148659.peg.1055
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148659.peg.1240
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148659.peg.1682
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148659.peg.702
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.148659.peg.1332
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148659.peg.1789
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148659.peg.1791
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148659.peg.855
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148659.peg.1166
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.148659.peg.156
Ammonia_assimilation	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.148659.peg.1965
Anaerobic_respiratory_reductases	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148659.peg.1033
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148659.peg.748
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148659.peg.1931
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148659.peg.748
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148659.peg.1931
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148659.peg.748
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148659.peg.998
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148659.peg.998
Arginine_and_Ornithine_Degradation	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148659.peg.140
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.148659.peg.998
Arginine_and_Ornithine_Degradation	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148659.peg.1222
Arginine_and_Ornithine_Degradation	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148659.peg.139
Arginine_and_Ornithine_Degradation	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148659.peg.1224
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.148659.peg.1357
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148659.peg.644
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148659.peg.643
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148659.peg.477
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148659.peg.1644
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.148659.peg.557
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148659.peg.46
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148659.peg.549
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.148659.peg.1577
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.148659.peg.548
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.148659.peg.556
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.148659.peg.553
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.148659.peg.1481
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148659.peg.558
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.148659.peg.2127
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.148659.peg.728
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148659.peg.138
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148659.peg.1211
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.148659.peg.2079
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.148659.peg.1350
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.148659.peg.1349
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.148659.peg.1348
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.148659.peg.626
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.148659.peg.921
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148659.peg.147
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.148659.peg.547
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148659.peg.1644
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.148659.peg.557
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148659.peg.549
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.148659.peg.1577
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.148659.peg.548
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.148659.peg.556
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.148659.peg.553
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148659.peg.558
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148659.peg.138
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148659.peg.137
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.148659.peg.1350
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.148659.peg.1349
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.148659.peg.1348
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.148659.peg.1346
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.148659.peg.626
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.148659.peg.921
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.148659.peg.138
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.148659.peg.137
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.148659.peg.1577
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148659.peg.863
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148659.peg.2139
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148659.peg.732
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.148659.peg.2155
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148659.peg.742
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148659.peg.1659
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.148659.peg.859
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148659.peg.1347
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.148659.peg.1350
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.148659.peg.1349
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.148659.peg.1348
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.148659.peg.1346
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.148659.peg.626
Bacterial_cell_division_cluster	Septum site-determining protein MinD	fig|6666666.148659.peg.921
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.148659.peg.1531
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.148659.peg.1531
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148659.peg.1051
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148659.peg.147
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148659.peg.1075
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148659.peg.1641
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148659.peg.1151
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148659.peg.1711
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148659.peg.525
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148659.peg.1471
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148659.peg.2014
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.148659.peg.2015
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.148659.peg.1559
Biotin_biosynthesis	Biotin synthesis protein BioG	fig|6666666.148659.peg.1558
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148659.peg.1542
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148659.peg.1985
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148659.peg.1107
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148659.peg.1759
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148659.peg.1151
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148659.peg.1711
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148659.peg.2014
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.148659.peg.2015
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.148659.peg.1559
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioG	fig|6666666.148659.peg.1558
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148659.peg.154
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148659.peg.1985
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148659.peg.1151
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.148659.peg.1711
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148659.peg.525
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.148659.peg.1471
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.148659.peg.2014
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.148659.peg.2015
Biotin_synthesis_cluster	Biotin synthesis protein BioC	fig|6666666.148659.peg.1559
Biotin_synthesis_cluster	Biotin synthesis protein BioG	fig|6666666.148659.peg.1558
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.148659.peg.1542
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.148659.peg.154
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.148659.peg.1985
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148659.peg.1107
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148659.peg.1759
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148659.peg.1048
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.148659.peg.884
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.148659.peg.248
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148659.peg.1484
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.148659.peg.754
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.148659.peg.302
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.148659.peg.303
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148659.peg.1330
CBSS-176280.1.peg.1561	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148659.peg.919
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148659.peg.1581
CBSS-176280.1.peg.1561	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148659.peg.758
CBSS-196620.1.peg.2477	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148659.peg.1582
CBSS-196620.1.peg.2477	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148659.peg.1222
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148659.peg.1001
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.148659.peg.1243
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.148659.peg.463
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.148659.peg.1693
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.148659.peg.1693
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148659.peg.931
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148659.peg.1485
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148659.peg.479
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.148659.peg.72
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148659.peg.152
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148659.peg.117
CBSS-226186.1.peg.3978	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148659.peg.1249
CBSS-226186.1.peg.3978	FIG032012: hypothetical protein	fig|6666666.148659.peg.1250
CBSS-226186.1.peg.3978	FIG036016: hypothetical protein	fig|6666666.148659.peg.1251
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148659.peg.385
CBSS-226186.1.peg.4416	Cell division ZapA family protein	fig|6666666.148659.peg.386
CBSS-226186.1.peg.4416	FIG034863: hypothetical protein	fig|6666666.148659.peg.387
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148659.peg.1196
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.148659.peg.1038
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148659.peg.1664
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148659.peg.1249
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148659.peg.354
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148659.peg.1249
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148659.peg.354
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.148659.peg.2080
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148659.peg.1849
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.148659.peg.360
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.148659.peg.361
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148659.peg.1832
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.148659.peg.911
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148659.peg.35
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.148659.peg.264
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.148659.peg.817
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.148659.peg.1477
CBSS-316407.3.peg.1371	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.148659.peg.45
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148659.peg.476
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148659.peg.476
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.148659.peg.1634
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148659.peg.491
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.148659.peg.492
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148659.peg.2125
CBSS-326442.4.peg.1852	LSU m5C1962 methyltransferase RlmI	fig|6666666.148659.peg.350
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148659.peg.304
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148659.peg.135
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148659.peg.353
CBSS-342610.3.peg.283	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148659.peg.919
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148659.peg.806
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148659.peg.1292
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.148659.peg.1745
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.148659.peg.567
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148659.peg.1211
CBSS-354.1.peg.2917	FIG003879: Predicted amidohydrolase	fig|6666666.148659.peg.1304
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.148659.peg.1349
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.148659.peg.1348
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.148659.peg.626
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148659.peg.1364
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148659.peg.1539
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148659.peg.995
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.148659.peg.1208
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148659.peg.464
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148659.peg.1682
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.148659.peg.1844
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148659.peg.262
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.148659.peg.430
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.148659.peg.1534
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148659.peg.489
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148659.peg.937
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148659.peg.937
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.148659.peg.2062
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148659.peg.1316
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148659.peg.913
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148659.peg.549
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148659.peg.1347
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148659.peg.188
CBSS-83333.1.peg.946	LSU m5C1962 methyltransferase RlmI	fig|6666666.148659.peg.350
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148659.peg.1682
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148659.peg.1374
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148659.peg.1503
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148659.peg.855
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.148659.peg.1166
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148659.peg.1956
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148659.peg.2139
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148659.peg.114
CRISPRs	CRISPR-associated RecB family exonuclease Cas4a	fig|6666666.148659.peg.1948
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.148659.peg.1949
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.148659.peg.1916
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.148659.peg.1947
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.148659.peg.1915
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.148659.peg.1946
CRISP_Cmr_Cluster	CRISPR-associated RAMP Cmr2	fig|6666666.148659.peg.1921
CRISP_Cmr_Cluster	CRISPR-associated RAMP Cmr3	fig|6666666.148659.peg.1920
CRISP_Cmr_Cluster	CRISPR-associated RAMP Cmr4	fig|6666666.148659.peg.1919
CRISP_Cmr_Cluster	CRISPR-associated RAMP Cmr5	fig|6666666.148659.peg.1918
CRISP_Cmr_Cluster	CRISPR-associated RAMP Cmr6	fig|6666666.148659.peg.1917
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.148659.peg.503
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148659.peg.504
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148659.peg.757
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148659.peg.1686
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148659.peg.2060
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148659.peg.1616
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148659.peg.1679
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148659.peg.1536
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.148659.peg.1680
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148659.peg.593
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148659.peg.605
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148659.peg.749
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148659.peg.2122
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148659.peg.1001
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.148659.peg.1243
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.148659.peg.683
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148659.peg.111
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148659.peg.874
Capsular_Polysaccharides_Biosynthesis_and_Assembly	O-antigen flippase Wzx	fig|6666666.148659.peg.1098
Capsular_Polysaccharides_Biosynthesis_and_Assembly	Tyrosine-protein kinase Wzc (EC 2.7.10.2)	fig|6666666.148659.peg.417
Capsular_heptose_biosynthesis	GDP-L-fucose synthetase (EC 1.1.1.271)	fig|6666666.148659.peg.1239
Capsular_heptose_biosynthesis	GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	fig|6666666.148659.peg.1238
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148659.peg.1506
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.148659.peg.1586
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148659.peg.748
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148659.peg.1931
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148659.peg.748
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.148659.peg.1
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148659.peg.138
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148659.peg.137
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148659.peg.1340
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148659.peg.1639
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148659.peg.1783
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.148659.peg.382
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148659.peg.844
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.148659.peg.504
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.148659.peg.625
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.148659.peg.197
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148659.peg.198
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148659.peg.1256
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148659.peg.1925
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148659.peg.1644
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148659.peg.46
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148659.peg.756
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148659.peg.162
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148659.peg.161
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.148659.peg.1246
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.148659.peg.1705
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148659.peg.1979
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148659.peg.42
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148659.peg.768
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.148659.peg.1236
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148659.peg.979
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Isochorismate synthase (EC 5.4.4.2)	fig|6666666.148659.peg.1469
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148659.peg.680
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148659.peg.1638
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148659.peg.980
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148659.peg.1202
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.148659.peg.1634
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148659.peg.2140
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148659.peg.940
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.148659.peg.2140
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148659.peg.2091
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148659.peg.668
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148659.peg.1116
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148659.peg.671
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148659.peg.1958
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148659.peg.206
Cobalamin_synthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148659.peg.670
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148659.peg.458
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148659.peg.208
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148659.peg.206
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148659.peg.205
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148659.peg.205
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148659.peg.208
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148659.peg.1118
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148659.peg.1119
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148659.peg.1121
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148659.peg.13
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148659.peg.1117
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148659.peg.669
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148659.peg.638
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148659.peg.64
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.148659.peg.518
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.148659.peg.2024
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148659.peg.64
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.148659.peg.518
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.148659.peg.1364
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.148659.peg.2143
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148659.peg.561
Coenzyme_A_Biosynthesis	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148659.peg.1074
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.148659.peg.461
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148659.peg.456
Coenzyme_A_Biosynthesis	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148659.peg.426
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.148659.peg.354
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.148659.peg.1781
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.148659.peg.1781
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.148659.peg.561
Coenzyme_A_Biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148659.peg.1074
Coenzyme_A_Biosynthesis_cluster	FIG137884: hypothetical protein	fig|6666666.148659.peg.628
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148659.peg.456
Coenzyme_A_Biosynthesis_cluster	Pantothenate kinase type III, CoaX-like (EC 2.7.1.33)	fig|6666666.148659.peg.426
Coenzyme_B12_biosynthesis	Adenosylcobinamide amidohydrolase (EC 3.5.1.90)	fig|6666666.148659.peg.615
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.148659.peg.668
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.148659.peg.1116
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148659.peg.671
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148659.peg.1958
Coenzyme_B12_biosynthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.148659.peg.206
Coenzyme_B12_biosynthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.148659.peg.670
Coenzyme_B12_biosynthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.148659.peg.458
Coenzyme_B12_biosynthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.148659.peg.208
Coenzyme_B12_biosynthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.148659.peg.206
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.148659.peg.205
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.148659.peg.205
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)	fig|6666666.148659.peg.207
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)	fig|6666666.148659.peg.207
Coenzyme_B12_biosynthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.148659.peg.208
Coenzyme_B12_biosynthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148659.peg.1118
Coenzyme_B12_biosynthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.148659.peg.1119
Coenzyme_B12_biosynthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.148659.peg.1121
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148659.peg.13
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.148659.peg.1117
Coenzyme_B12_biosynthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.148659.peg.669
Coenzyme_B12_biosynthesis	Outer membrane vitamin B12 receptor BtuB	fig|6666666.148659.peg.613
Coenzyme_B12_biosynthesis	Outer membrane vitamin B12 receptor BtuB	fig|6666666.148659.peg.614
Coenzyme_B12_biosynthesis	Predicted cobalt transporter in Bacteroides_Porphyromonas	fig|6666666.148659.peg.1366
Coenzyme_B12_biosynthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.148659.peg.638
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.148659.peg.640
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148659.peg.617
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.148659.peg.641
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148659.peg.1273
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)	fig|6666666.148659.peg.852
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148659.peg.1666
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.148659.peg.1203
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.148659.peg.1876
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.148659.peg.1262
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.148659.peg.940
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.148659.peg.1432
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148659.peg.796
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148659.peg.1391
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.148659.peg.1431
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.148659.peg.1429
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.148659.peg.1428
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.148659.peg.1427
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.148659.peg.1426
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.148659.peg.1425
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.148659.peg.1424
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.148659.peg.1422
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.148659.peg.1421
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.148659.peg.1420
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.148659.peg.1419
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.148659.peg.1435
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.148659.peg.1436
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148659.peg.794
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148659.peg.1392
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.148659.peg.1434
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148659.peg.863
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148659.peg.720
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.148659.peg.1964
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148659.peg.1956
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148659.peg.2139
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148659.peg.703
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148659.peg.1999
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148659.peg.1536
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.148659.peg.2155
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148659.peg.742
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148659.peg.1659
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148659.peg.1805
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.148659.peg.1703
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148659.peg.1582
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.148659.peg.1582
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.148659.peg.882
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.148659.peg.682
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148659.peg.262
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.148659.peg.430
Cysteine_Biosynthesis	Sulfate permease	fig|6666666.148659.peg.22
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148659.peg.1789
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148659.peg.1791
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148659.peg.1789
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148659.peg.1791
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148659.peg.1679
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.148659.peg.1208
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.148659.peg.1725
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.148659.peg.1703
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148659.peg.54
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.148659.peg.234
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148659.peg.1340
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148659.peg.1639
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.148659.peg.1371
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148659.peg.99
DNA_processing_cluster	Recombination protein RecR	fig|6666666.148659.peg.1210
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.148659.peg.993
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog in greater Bacteroides group	fig|6666666.148659.peg.2148
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.148659.peg.363
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.148659.peg.1926
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.148659.peg.1330
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.148659.peg.33
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.148659.peg.224
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.148659.peg.859
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.148659.peg.1779
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.148659.peg.259
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148659.peg.1088
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148659.peg.1382
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148659.peg.871
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.148659.peg.464
DNA_repair,_bacterial	RecA protein	fig|6666666.148659.peg.848
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.148659.peg.261
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.148659.peg.394
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.148659.peg.92
DNA_repair,_bacterial_MutL-MutS_system	MutS domain protein, family 2	fig|6666666.148659.peg.1029
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.148659.peg.367
DNA_repair,_bacterial_RecBCD_pathway	RecD-like DNA helicase Atu2026	fig|6666666.148659.peg.1252
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.148659.peg.398
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.148659.peg.1760
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.148659.peg.382
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.148659.peg.1940
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.148659.peg.848
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.148659.peg.1210
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.148659.peg.261
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.148659.peg.54
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.148659.peg.995
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.148659.peg.92
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Protein Implicated in DNA repair function with RecA and MutS	fig|6666666.148659.peg.1660
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.148659.peg.848
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.148659.peg.153
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148659.peg.703
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.148659.peg.1
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148659.peg.1340
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148659.peg.1639
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.148659.peg.1783
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.148659.peg.382
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148659.peg.161
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.148659.peg.381
DNA_structural_proteins,_bacterial	DNA-binding protein HU-beta	fig|6666666.148659.peg.115
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.148659.peg.1213
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148659.peg.720
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.148659.peg.99
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2)	fig|6666666.148659.peg.1441
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148659.peg.1340
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148659.peg.1639
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148659.peg.1562
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148659.peg.353
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148659.peg.1083
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.148659.peg.505
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.148659.peg.1351
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.148659.peg.1312
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.148659.peg.912
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.148659.peg.938
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.148659.peg.1351
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.148659.peg.73
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.148659.peg.287
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.148659.peg.287
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.148659.peg.1697
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148659.peg.2031
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.148659.peg.343
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.148659.peg.344
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148659.peg.507
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148659.peg.506
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.148659.peg.881
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148659.peg.1021
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.148659.peg.1966
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.148659.peg.1022
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.148659.peg.1303
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148659.peg.71
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.148659.peg.1086
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148659.peg.717
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.148659.peg.1929
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148659.peg.535
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148659.peg.1323
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.148659.peg.196
Dimethylarginine_metabolism	NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)	fig|6666666.148659.peg.225
Dimethylarginine_metabolism	Ornithine aminotransferase (EC 2.6.1.13)	fig|6666666.148659.peg.1224
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148659.peg.133
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148659.peg.515
ECSIG4-SIG7	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148659.peg.2001
ECSIG4-SIG7	Organic solvent tolerance protein precursor	fig|6666666.148659.peg.1361
ECSIG4-SIG7	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148659.peg.131
ECSIG4-SIG7	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148659.peg.397
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.148659.peg.1755
Entner-Doudoroff_Pathway	Glucokinase (EC 2.7.1.2)	fig|6666666.148659.peg.1671
Entner-Doudoroff_Pathway	Glucokinase (EC 2.7.1.2)	fig|6666666.148659.peg.1672
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148659.peg.2060
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148659.peg.1616
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148659.peg.126
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.148659.peg.1038
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148659.peg.1039
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 1 family protein	fig|6666666.148659.peg.1294
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148659.peg.255
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.148659.peg.715
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148659.peg.69
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.148659.peg.1196
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)	fig|6666666.148659.peg.1695
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.148659.peg.2078
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.148659.peg.1696
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein	fig|6666666.148659.peg.243
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9)	fig|6666666.148659.peg.1368
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.148659.peg.134
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148659.peg.1038
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148659.peg.1039
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.148659.peg.1038
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.148659.peg.204
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148659.peg.1039
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.148659.peg.1063
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.148659.peg.567
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.148659.peg.1063
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148659.peg.549
Flavodoxin	Flavodoxin	fig|6666666.148659.peg.1080
Flavodoxin	Flavodoxin 1	fig|6666666.148659.peg.1788
Flavodoxin	Flavodoxin 2	fig|6666666.148659.peg.1747
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.148659.peg.1747
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148659.peg.853
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148659.peg.1487
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148659.peg.1784
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.148659.peg.979
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.148659.peg.1995
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.148659.peg.442
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148659.peg.2025
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148659.peg.1532
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.148659.peg.442
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148659.peg.595
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148659.peg.680
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.148659.peg.1638
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.148659.peg.980
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148659.peg.1994
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148659.peg.853
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.148659.peg.1487
Folate_biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.148659.peg.1074
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.148659.peg.46
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.148659.peg.2025
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.148659.peg.1532
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148659.peg.595
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148659.peg.756
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.148659.peg.456
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148659.peg.1979
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148659.peg.82
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.148659.peg.226
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148659.peg.562
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148659.peg.562
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148659.peg.82
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148659.peg.633
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148659.peg.860
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.148659.peg.338
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.148659.peg.24
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148659.peg.1189
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148659.peg.1273
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.148659.peg.1675
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148659.peg.672
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.148659.peg.156
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.148659.peg.1965
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase I, cytoplasmic (EC 3.5.1.1)	fig|6666666.148659.peg.2057
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.148659.peg.1189
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148659.peg.711
Glutathione:_Non-redox_reactions	Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis	fig|6666666.148659.peg.1255
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148659.peg.1789
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148659.peg.1791
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148659.peg.2108
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148659.peg.459
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148659.peg.1191
Glycine_Biosynthesis	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.148659.peg.453
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148659.peg.41
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.148659.peg.459
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148659.peg.1503
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148659.peg.1230
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148659.peg.1789
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148659.peg.1791
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.148659.peg.911
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148659.peg.1254
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148659.peg.80
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148659.peg.80
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148659.peg.1229
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148659.peg.487
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148659.peg.623
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148659.peg.1126
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148659.peg.41
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148659.peg.304
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148659.peg.1503
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148659.peg.767
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.148659.peg.911
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148659.peg.1254
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148659.peg.35
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.148659.peg.264
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148659.peg.1095
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148659.peg.1724
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148659.peg.733
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148659.peg.1136
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148659.peg.1567
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148659.peg.1836
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148659.peg.666
Glycogen_metabolism	Putative glycogen debranching enzyme, archaeal type, TIGR01561	fig|6666666.148659.peg.1621
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148659.peg.2108
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.148659.peg.1755
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)	fig|6666666.148659.peg.757
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148659.peg.1686
Glycolysis_and_Gluconeogenesis	Glucokinase (EC 2.7.1.2)	fig|6666666.148659.peg.1671
Glycolysis_and_Gluconeogenesis	Glucokinase (EC 2.7.1.2)	fig|6666666.148659.peg.1672
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148659.peg.1320
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148659.peg.2060
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148659.peg.1616
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148659.peg.126
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.148659.peg.159
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148659.peg.974
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148659.peg.593
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.148659.peg.1755
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.148659.peg.1320
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.148659.peg.1616
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148659.peg.126
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148659.peg.974
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.148659.peg.593
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.148659.peg.1940
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.148659.peg.2079
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148659.peg.2100
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148659.peg.262
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148659.peg.430
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148659.peg.489
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148659.peg.937
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148659.peg.1881
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.148659.peg.1707
GroEL_GroES	Chaperone protein DnaK	fig|6666666.148659.peg.1164
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.148659.peg.498
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.148659.peg.500
GroEL_GroES	Heat shock protein GrpE	fig|6666666.148659.peg.1706
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.148659.peg.1707
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.148659.peg.1164
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.148659.peg.1706
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148659.peg.454
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148659.peg.1544
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148659.peg.2091
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148659.peg.607
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.148659.peg.161
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.148659.peg.1198
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.148659.peg.238
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148659.peg.2158
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.148659.peg.481
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148659.peg.741
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.148659.peg.1034
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148659.peg.605
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148659.peg.749
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148659.peg.2122
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.148659.peg.122
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148659.peg.1510
Heme_and_Siroheme_Biosynthesis	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.148659.peg.454
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4)	fig|6666666.148659.peg.2094
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148659.peg.605
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148659.peg.749
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148659.peg.2122
Hfl_operon	GTP-binding protein HflX	fig|6666666.148659.peg.1812
High_affinity_phosphate_transporter_and_control_of_PHO_regulon	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148659.peg.1811
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.148659.peg.317
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.148659.peg.312
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.148659.peg.316
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.148659.peg.1800
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5'-nucleotidase YjjG (EC 3.1.3.5)	fig|6666666.148659.peg.236
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148659.peg.2098
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148659.peg.914
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.148659.peg.1544
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.148659.peg.2156
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.148659.peg.2155
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.148659.peg.644
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.148659.peg.643
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148659.peg.1682
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148659.peg.702
Iron-sulfur_cluster_assembly	Ferritin-like protein 2	fig|6666666.148659.peg.1237
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148659.peg.251
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.148659.peg.250
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.148659.peg.252
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.148659.peg.1708
Iron-sulfur_cluster_assembly	Sulfur acceptor protein SufE for iron-sulfur cluster assembly	fig|6666666.148659.peg.2093
Iron-sulfur_cluster_assembly	Thiamin biosynthesis lipoprotein ApbE	fig|6666666.148659.peg.297
Isoleucine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148659.peg.1037
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148659.peg.1240
Isoleucine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148659.peg.1033
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148659.peg.748
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148659.peg.1931
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148659.peg.1316
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148659.peg.2154
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148659.peg.913
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148659.peg.27
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148659.peg.1383
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148659.peg.897
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148659.peg.577
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148659.peg.748
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148659.peg.1931
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148659.peg.188
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148659.peg.748
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148659.peg.1931
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148659.peg.748
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148659.peg.1931
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148659.peg.748
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.148659.peg.1931
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148659.peg.748
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148659.peg.1931
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148659.peg.188
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.148659.peg.1676
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.148659.peg.627
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.148659.peg.1746
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148659.peg.68
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.148659.peg.84
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	fig|6666666.148659.peg.2159
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148659.peg.2097
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.148659.peg.600
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148659.peg.111
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148659.peg.874
KDO2-Lipid_A_biosynthesis	O-antigen flippase Wzx	fig|6666666.148659.peg.1098
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.148659.peg.610
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148659.peg.1709
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148659.peg.70
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.148659.peg.1317
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.148659.peg.2053
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.148659.peg.1810
L-rhamnose_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148659.peg.1128
LMPTP_YfkJ_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148659.peg.919
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148659.peg.1581
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.148659.peg.376
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.148659.peg.374
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.148659.peg.375
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.148659.peg.377
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.148659.peg.372
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.148659.peg.373
Lactate_utilization	L-lactate permease	fig|6666666.148659.peg.1288
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.148659.peg.1127
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.148659.peg.1128
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518	fig|6666666.148659.peg.1129
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148659.peg.334
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148659.peg.1573
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148659.peg.82
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148659.peg.633
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148659.peg.860
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.148659.peg.1574
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148659.peg.334
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148659.peg.633
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.148659.peg.860
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.148659.peg.114
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148659.peg.1240
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148659.peg.1240
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148659.peg.767
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.148659.peg.484
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148659.peg.1291
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.148659.peg.484
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.148659.peg.1291
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148659.peg.882
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148659.peg.1539
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.148659.peg.770
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.148659.peg.1632
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.148659.peg.883
Listeria_surface_proteins:_Internalin-like_proteins	internalin, putative	fig|6666666.148659.peg.1794
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.148659.peg.69
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.148659.peg.68
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.148659.peg.2097
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148659.peg.190
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.148659.peg.191
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148659.peg.189
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.148659.peg.274
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.148659.peg.1709
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.148659.peg.70
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.148659.peg.260
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.148659.peg.260
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148659.peg.2
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148659.peg.1935
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148659.peg.1984
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148659.peg.545
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.148659.peg.2126
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148659.peg.2125
Lysine_Biosynthesis_DAP_Pathway	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148659.peg.771
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.148659.peg.2
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.148659.peg.1935
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.148659.peg.1984
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148659.peg.545
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.148659.peg.2126
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.148659.peg.2125
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.148659.peg.771
Lysine_degradation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148659.peg.1030
Lysine_degradation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148659.peg.1031
Lysine_degradation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148659.peg.1027
Lysine_fermentation	3,5-diaminohexanoate dehydrogenase (EC 1.4.1.11)	fig|6666666.148659.peg.1026
Lysine_fermentation	3-aminobutyryl-CoA ammonia-lyase (EC 4.3.1.14)	fig|6666666.148659.peg.1024
Lysine_fermentation	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148659.peg.1036
Lysine_fermentation	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148659.peg.1037
Lysine_fermentation	3-keto-5-aminohexanoate cleavage enzyme	fig|6666666.148659.peg.1025
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148659.peg.1023
Lysine_fermentation	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148659.peg.1032
Lysine_fermentation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148659.peg.1033
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148659.peg.740
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.148659.peg.1035
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148659.peg.741
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.148659.peg.1034
Lysine_fermentation	L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3)	fig|6666666.148659.peg.1030
Lysine_fermentation	L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3)	fig|6666666.148659.peg.1031
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.148659.peg.1027
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.148659.peg.507
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	fig|6666666.148659.peg.506
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148659.peg.806
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148659.peg.1292
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.148659.peg.1745
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.148659.peg.567
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.148659.peg.368
Macromolecular_synthesis_operon	Transamidase GatB domain protein	fig|6666666.148659.peg.559
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148659.peg.1659
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148659.peg.262
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.148659.peg.430
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.148659.peg.683
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.148659.peg.130
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148659.peg.733
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148659.peg.1136
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148659.peg.1567
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.148659.peg.1836
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.148659.peg.1573
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148659.peg.861
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148659.peg.1623
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.148659.peg.666
Maltose_and_Maltodextrin_Utilization	Predicted glucose transporter in maltodextrin utilization gene cluster	fig|6666666.148659.peg.2107
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148659.peg.866
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148659.peg.935
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148659.peg.1648
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.148659.peg.1649
Mannose_Metabolism	Beta-mannosidase (EC 3.2.1.25)	fig|6666666.148659.peg.32
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)	fig|6666666.148659.peg.2151
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.148659.peg.446
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.148659.peg.1051
Melibiose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.148659.peg.82
Menaquinone_Biosynthesis_via_Futalosine_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.148659.peg.939
Menaquinone_and_Phylloquinone_Biosynthesis	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.148659.peg.2124
Menaquinone_and_Phylloquinone_Biosynthesis	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.148659.peg.939
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.148659.peg.1468
Menaquinone_and_Phylloquinone_Biosynthesis	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.148659.peg.1469
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.148659.peg.1467
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.148659.peg.1466
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.148659.peg.1465
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.148659.peg.2124
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163)	fig|6666666.148659.peg.939
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.148659.peg.1468
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.148659.peg.1469
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.148659.peg.1467
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.148659.peg.1466
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.148659.peg.1465
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148659.peg.1374
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148659.peg.550
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148659.peg.1055
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148659.peg.1064
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148659.peg.102
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148659.peg.476
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148659.peg.1826
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148659.peg.477
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.148659.peg.330
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148659.peg.526
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.148659.peg.476
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.148659.peg.1826
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.148659.peg.477
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148659.peg.476
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.148659.peg.711
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148659.peg.146
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148659.peg.970
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.148659.peg.2158
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.148659.peg.1466
Multidrug_Resistance_Efflux_Pumps	Membrane fusion protein of RND family multidrug efflux pump	fig|6666666.148659.peg.517
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148659.peg.7
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148659.peg.792
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148659.peg.1394
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.148659.peg.1077
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148659.peg.1374
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.148659.peg.135
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148659.peg.1003
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148659.peg.378
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148659.peg.379
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.148659.peg.1873
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.148659.peg.1872
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.148659.peg.1871
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.148659.peg.371
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148659.peg.1519
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148659.peg.1520
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148659.peg.1521
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.148659.peg.42
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148659.peg.334
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148659.peg.1660
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.148659.peg.1660
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.148659.peg.508
NAD_and_NADP_cofactor_biosynthesis_global	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.148659.peg.1519
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.148659.peg.601
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.148659.peg.508
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148659.peg.648
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148659.peg.57
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.148659.peg.58
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.148659.peg.1520
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.148659.peg.1521
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.148659.peg.296
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.148659.peg.291
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.148659.peg.292
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.148659.peg.293
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.148659.peg.295
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.148659.peg.294
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.148659.peg.2120
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.148659.peg.2118
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.148659.peg.2117
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.148659.peg.2116
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.148659.peg.2115
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.148659.peg.2114
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase	fig|6666666.148659.peg.1550
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Membrane protein associated with methylmalonyl-CoA decarboxylase	fig|6666666.148659.peg.1552
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148659.peg.1553
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148659.peg.1549
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.148659.peg.1549
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Na+/H+ antiporter NhaA type	fig|6666666.148659.peg.1804
Niacin-Choline_transport_and_metabolism	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148659.peg.648
Nitrate_and_nitrite_ammonification	Cytochrome c nitrite reductase, small subunit NrfH	fig|6666666.148659.peg.1752
Nitrate_and_nitrite_ammonification	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148659.peg.1751
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148659.peg.1491
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.148659.peg.1009
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.148659.peg.858
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.148659.peg.1316
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148659.peg.2154
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.148659.peg.913
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148659.peg.27
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148659.peg.1383
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.148659.peg.897
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.148659.peg.577
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.148659.peg.1640
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.148659.peg.914
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148659.peg.246
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.148659.peg.884
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.148659.peg.247
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.148659.peg.248
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.148659.peg.1784
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.148659.peg.1268
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.148659.peg.313
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.148659.peg.1076
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.148659.peg.1076
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.148659.peg.86
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.148659.peg.260
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.148659.peg.86
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148659.peg.1491
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.148659.peg.86
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.148659.peg.23
Oxidative_stress	Rubrerythrin	fig|6666666.148659.peg.193
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148659.peg.380
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.148659.peg.1516
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.148659.peg.1679
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.148659.peg.2031
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148659.peg.1536
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.148659.peg.226
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.148659.peg.1680
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148659.peg.2022
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148659.peg.2022
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.148659.peg.549
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148659.peg.696
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.148659.peg.1374
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148659.peg.672
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.148659.peg.758
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.148659.peg.1347
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.148659.peg.551
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.148659.peg.1346
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148659.peg.1290
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148659.peg.1318
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148659.peg.554
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148659.peg.555
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148659.peg.552
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148659.peg.550
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148659.peg.1055
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148659.peg.1064
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148659.peg.696
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148659.peg.555
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.148659.peg.552
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.148659.peg.550
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148659.peg.1055
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.148659.peg.1064
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.148659.peg.677
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148659.peg.675
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148659.peg.676
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148659.peg.1263
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148659.peg.397
Periplasmic_Stress_Response	HtrA protease/chaperone protein	fig|6666666.148659.peg.566
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148659.peg.190
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.148659.peg.191
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.148659.peg.397
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.148659.peg.1641
Persister_Cells	HipA protein	fig|6666666.148659.peg.826
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.148659.peg.852
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148659.peg.494
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.148659.peg.856
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.148659.peg.1885
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148659.peg.1674
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148659.peg.1277
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.148659.peg.1278
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.148659.peg.1279
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148659.peg.937
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148659.peg.937
Phosphate_metabolism	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148659.peg.1811
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.148659.peg.1269
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.148659.peg.1895
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148659.peg.671
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.148659.peg.1958
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.148659.peg.126
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase family	fig|6666666.148659.peg.1455
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.148659.peg.1503
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148659.peg.767
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148659.peg.1789
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.148659.peg.1791
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.148659.peg.911
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.148659.peg.1254
Photorespiration_(oxidative_C2_cycle)	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.148659.peg.2108
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148659.peg.41
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148659.peg.138
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148659.peg.137
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.148659.peg.672
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.148659.peg.732
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148659.peg.765
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.148659.peg.476
Polyamine_Metabolism	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.148659.peg.140
Polyamine_Metabolism	Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-)	fig|6666666.148659.peg.148
Polyamine_Metabolism	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.148659.peg.139
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148659.peg.1037
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)	fig|6666666.148659.peg.1036
Polyhydroxybutyrate_metabolism	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)	fig|6666666.148659.peg.1037
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148659.peg.1023
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)	fig|6666666.148659.peg.1023
Polyhydroxybutyrate_metabolism	Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)	fig|6666666.148659.peg.1032
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.148659.peg.1674
Polyphosphate	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148659.peg.1811
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148659.peg.748
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.148659.peg.1931
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.148659.peg.748
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148659.peg.1931
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.148659.peg.188
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148659.peg.675
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.148659.peg.676
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.148659.peg.1263
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.148659.peg.1275
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148659.peg.2156
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.148659.peg.2156
Potassium_homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.148659.peg.1547
Potassium_homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.148659.peg.1968
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148659.peg.2155
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.148659.peg.2155
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.148659.peg.1106
Proline,_4-hydroxyproline_uptake_and_utilization	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)	fig|6666666.148659.peg.1222
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148659.peg.1039
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.148659.peg.1553
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.148659.peg.1549
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA epimerase (EC 5.1.99.1)	fig|6666666.148659.peg.1554
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.148659.peg.1594
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.148659.peg.1491
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.148659.peg.1707
Protein_chaperones	Chaperone protein DnaK	fig|6666666.148659.peg.1164
Protein_chaperones	Chaperone protein HtpG	fig|6666666.148659.peg.44
Protein_chaperones	ClpB protein	fig|6666666.148659.peg.1079
Protein_chaperones	ClpB protein	fig|6666666.148659.peg.2004
Protein_chaperones	Heat shock protein GrpE	fig|6666666.148659.peg.1706
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.148659.peg.1581
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148659.peg.1546
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.148659.peg.1719
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148659.peg.724
Protein_degradation	Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)	fig|6666666.148659.peg.1720
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148659.peg.10
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.148659.peg.399
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.148659.peg.400
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.148659.peg.590
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148659.peg.1079
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.148659.peg.2004
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.148659.peg.224
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.148659.peg.1931
Proton-dependent_Peptide_Transporters	Di/tripeptide permease DtpT	fig|6666666.148659.peg.2016
Purine_Utilization	Xanthine permease	fig|6666666.148659.peg.2085
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.148659.peg.898
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148659.peg.385
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148659.peg.167
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.148659.peg.909
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.148659.peg.755
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.148659.peg.1083
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.148659.peg.443
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148659.peg.562
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148659.peg.562
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.148659.peg.491
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.148659.peg.756
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148659.peg.502
Purine_conversions	Nucleotide pyrophosphatase (EC 3.6.1.9)	fig|6666666.148659.peg.119
Purine_conversions	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.148659.peg.1811
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148659.peg.535
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148659.peg.1323
Purine_conversions	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148659.peg.2084
Purine_conversions	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148659.peg.1936
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.148659.peg.1088
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.148659.peg.1382
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.148659.peg.562
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.148659.peg.562
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.148659.peg.502
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.148659.peg.2022
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148659.peg.2154
Pyridoxin_(Vitamin_B6)_Biosynthesis	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.148659.peg.2001
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148659.peg.1230
Pyridoxin_(Vitamin_B6)_Biosynthesis	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)	fig|6666666.148659.peg.1177
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148659.peg.2060
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148659.peg.1229
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.148659.peg.1651
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)	fig|6666666.148659.peg.602
Pyrimidine_utilization	Uracil permease	fig|6666666.148659.peg.1086
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.148659.peg.526
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.148659.peg.1055
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148659.peg.1240
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.148659.peg.80
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.148659.peg.80
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.148659.peg.268
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.148659.peg.1549
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.148659.peg.1615
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.148659.peg.974
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.148659.peg.1038
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative	fig|6666666.148659.peg.1274
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148659.peg.5
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148659.peg.1039
Queuosine-Archaeosine_Biosynthesis	Epoxyqueuosine (oQ) reductase QueG	fig|6666666.148659.peg.450
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148659.peg.595
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148659.peg.431
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.148659.peg.1183
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.148659.peg.1258
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148659.peg.1013
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148659.peg.1012
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148659.peg.931
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148659.peg.1485
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148659.peg.479
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.148659.peg.1666
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.148659.peg.1249
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.148659.peg.1778
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148659.peg.2021
RNA_methylation	LSU m5C1962 methyltransferase RlmI	fig|6666666.148659.peg.350
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.148659.peg.1999
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.148659.peg.2091
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148659.peg.131
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148659.peg.1256
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148659.peg.1967
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.148659.peg.1062
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148659.peg.922
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148659.peg.710
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.148659.peg.258
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.148659.peg.138
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.148659.peg.137
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148659.peg.844
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.148659.peg.1256
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148659.peg.1925
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148659.peg.844
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.148659.peg.504
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.148659.peg.625
RNA_modification_cluster	Protein YidD	fig|6666666.148659.peg.197
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148659.peg.198
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.148659.peg.1843
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.148659.peg.378
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.148659.peg.379
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.148659.peg.1657
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.148659.peg.1211
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.148659.peg.1048
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.148659.peg.1694
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148659.peg.1082
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148659.peg.1642
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148659.peg.697
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148659.peg.1195
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148659.peg.721
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148659.peg.1484
RecA_and_RecX	RecA protein	fig|6666666.148659.peg.848
RecA_and_RecX	Regulatory protein RecX	fig|6666666.148659.peg.153
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148659.peg.133
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.148659.peg.515
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.148659.peg.1003
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.148659.peg.2060
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.148659.peg.5
Redox-dependent_regulation_of_nucleus_processes	Nicotinamidase (EC 3.5.1.19)	fig|6666666.148659.peg.648
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.148659.peg.57
Resistance_to_Vancomycin	Vancomycin B-type resistance protein VanW	fig|6666666.148659.peg.509
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.148659.peg.1340
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.148659.peg.1639
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.148659.peg.1562
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.148659.peg.353
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148659.peg.171
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148659.peg.1507
Rhamnose_containing_glycans	Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)	fig|6666666.148659.peg.2002
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.148659.peg.334
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.148659.peg.1103
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148659.peg.1506
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148659.peg.1505
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148659.peg.1504
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148659.peg.572
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148659.peg.151
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148659.peg.1378
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148659.peg.151
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148659.peg.918
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148659.peg.572
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148659.peg.918
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148659.peg.700
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148659.peg.572
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148659.peg.151
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148659.peg.1378
Riboflavin,_FMN_and_FAD_metabolism_in_plants	C-terminal domain of CinA type S	fig|6666666.148659.peg.1660
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148659.peg.151
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.148659.peg.93
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148659.peg.918
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148659.peg.572
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148659.peg.7
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148659.peg.792
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.148659.peg.1394
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148659.peg.918
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148659.peg.700
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148659.peg.1484
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148659.peg.572
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.148659.peg.151
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.148659.peg.1378
Riboflavin_synthesis_cluster	C-terminal domain of CinA type S	fig|6666666.148659.peg.1660
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.148659.peg.151
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.148659.peg.572
Riboflavin_synthesis_cluster	Inner membrane protein YihY, formerly thought to be RNase BN	fig|6666666.148659.peg.919
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.148659.peg.171
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.148659.peg.71
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148659.peg.700
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.148659.peg.1536
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148659.peg.609
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.148659.peg.772
Ribonuclease_H	Ribonuclease HI-related protein 3	fig|6666666.148659.peg.1169
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148659.peg.703
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.148659.peg.703
Ribonucleotide_reduction	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.148659.peg.1089
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.148659.peg.1214
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.148659.peg.1215
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.148659.peg.146
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.148659.peg.1873
Ribosomal_protein_S5p_acylation	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148659.peg.1310
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.148659.peg.1852
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.148659.peg.1870
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.148659.peg.1845
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.148659.peg.1873
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.148659.peg.1846
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.148659.peg.1856
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.148659.peg.1856
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.148659.peg.1688
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.148659.peg.2053
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.148659.peg.1860
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.148659.peg.569
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.148659.peg.569
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.148659.peg.1865
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.148659.peg.1246
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.148659.peg.1658
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.148659.peg.368
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.148659.peg.360
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.148659.peg.1863
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.148659.peg.1844
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.148659.peg.1852
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.148659.peg.568
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.148659.peg.1872
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.148659.peg.1855
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.148659.peg.359
Ribosome_activity_modulation	Ribosome hibernation protein YhbH	fig|6666666.148659.peg.369
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.148659.peg.1317
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148659.peg.2021
Ribosome_biogenesis_bacterial	LSU m5C1962 methyltransferase RlmI	fig|6666666.148659.peg.350
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.148659.peg.1642
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.148659.peg.697
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.148659.peg.607
Ribosome_biogenesis_bacterial	Ribosomal-protein-S5p-alanine acetyltransferase	fig|6666666.148659.peg.1310
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.148659.peg.131
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.148659.peg.1195
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148659.peg.742
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148659.peg.1967
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.148659.peg.10
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.148659.peg.1831
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.148659.peg.360
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.148659.peg.361
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.148659.peg.1832
Rubrerythrin	Rubrerythrin	fig|6666666.148659.peg.193
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.148659.peg.1270
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.148659.peg.93
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.148659.peg.776
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.148659.peg.468
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.148659.peg.24
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148659.peg.1684
Selenocysteine_metabolism	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148659.peg.1813
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.148659.peg.921
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.148659.peg.1230
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.148659.peg.1229
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148659.peg.487
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148659.peg.623
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148659.peg.1126
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148659.peg.487
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148659.peg.623
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.148659.peg.1126
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.148659.peg.41
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.148659.peg.531
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148659.peg.1539
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.148659.peg.1539
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148659.peg.1933
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.148659.peg.1934
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.148659.peg.1751
Spore_Core_Dehydration	Spore maturation protein A-like protein	fig|6666666.148659.peg.490
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148659.peg.162
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.148659.peg.498
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.148659.peg.569
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.148659.peg.481
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.148659.peg.250
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.148659.peg.27
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148659.peg.1383
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.148659.peg.2098
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.148659.peg.1644
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.148659.peg.548
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.148659.peg.1587
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.148659.peg.1738
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.148659.peg.1738
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.148659.peg.1557
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148659.peg.1556
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148659.peg.1555
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.148659.peg.767
TCA_Cycle	Fumarate hydratase class I (EC 4.2.1.2)	fig|6666666.148659.peg.1370
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.148659.peg.1881
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.148659.peg.1556
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.148659.peg.1555
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.148659.peg.1383
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.148659.peg.102
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148659.peg.864
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148659.peg.863
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.148659.peg.864
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.148659.peg.863
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.148659.peg.1871
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.148659.peg.1871
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.148659.peg.2154
Thiamin_biosynthesis	Predicted thiamin transporter PnuT	fig|6666666.148659.peg.1828
Thiamin_biosynthesis	Sulfur carrier protein ThiS	fig|6666666.148659.peg.2046
Thiamin_biosynthesis	Sulfur carrier protein adenylyltransferase ThiF	fig|6666666.148659.peg.425
Thiamin_biosynthesis	Thiamin biosynthesis protein ThiC	fig|6666666.148659.peg.2045
Thiamin_biosynthesis	Thiamin pyrophosphokinase (EC 2.7.6.2)	fig|6666666.148659.peg.1827
Thiamin_biosynthesis	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)	fig|6666666.148659.peg.2044
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148659.peg.1367
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.148659.peg.1829
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.148659.peg.609
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiG	fig|6666666.148659.peg.2043
Thiamin_biosynthesis	Thiazole biosynthesis protein ThiH	fig|6666666.148659.peg.2042
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.148659.peg.588
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein F (EC 1.6.4.-)	fig|6666666.148659.peg.589
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.148659.peg.260
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.148659.peg.847
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.148659.peg.1664
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148659.peg.1095
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.148659.peg.1038
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.148659.peg.1039
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.148659.peg.1273
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.148659.peg.545
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.148659.peg.2126
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.148659.peg.1191
Threonine_degradation	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.148659.peg.453
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.148659.peg.1489
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.148659.peg.604
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148659.peg.605
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148659.peg.749
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.148659.peg.2122
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148659.peg.603
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.148659.peg.746
Ton_and_Tol_transport_systems	Outer membrane lipoprotein omp16 precursor	fig|6666666.148659.peg.1014
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148659.peg.637
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148659.peg.674
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148659.peg.1497
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.148659.peg.1939
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.148659.peg.246
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.148659.peg.373
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.148659.peg.1629
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.148659.peg.319
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.148659.peg.247
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.148659.peg.772
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.148659.peg.1705
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.148659.peg.567
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.148659.peg.1063
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.148659.peg.1871
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.148659.peg.895
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.148659.peg.543
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.148659.peg.1226
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.148659.peg.1871
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.148659.peg.895
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.148659.peg.1198
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.148659.peg.543
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.148659.peg.1226
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.148659.peg.361
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.148659.peg.371
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.148659.peg.1956
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.148659.peg.884
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.148659.peg.1848
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.148659.peg.248
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.148659.peg.951
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.148659.peg.242
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.148659.peg.1849
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.148659.peg.72
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.148659.peg.1106
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.148659.peg.202
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.148659.peg.2139
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.148659.peg.162
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.148659.peg.152
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.148659.peg.1831
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.148659.peg.481
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.148659.peg.117
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.148659.peg.2156
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.148659.peg.1724
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148659.peg.861
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.148659.peg.1623
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148659.peg.16
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.148659.peg.713
Type_VI_secretion_systems	ClpB protein	fig|6666666.148659.peg.1079
Type_VI_secretion_systems	ClpB protein	fig|6666666.148659.peg.2004
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.148659.peg.1051
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.148659.peg.1290
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.148659.peg.1318
USS-DB-7	ClpB protein	fig|6666666.148659.peg.1079
USS-DB-7	ClpB protein	fig|6666666.148659.peg.2004
Ubiquinone_Biosynthesis_in_Eucarya	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.148659.peg.1468
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.148659.peg.47
Universal_GTPases	GTP-binding protein EngA	fig|6666666.148659.peg.2080
Universal_GTPases	GTP-binding protein EngB	fig|6666666.148659.peg.333
Universal_GTPases	GTP-binding protein Era	fig|6666666.148659.peg.2079
Universal_GTPases	GTP-binding protein HflX	fig|6666666.148659.peg.1812
Universal_GTPases	GTP-binding protein Obg	fig|6666666.148659.peg.754
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.148659.peg.585
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148659.peg.844
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.148659.peg.1830
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.148659.peg.147
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.148659.peg.1075
Universal_GTPases	Translation elongation factor G	fig|6666666.148659.peg.1871
Universal_GTPases	Translation elongation factor LepA	fig|6666666.148659.peg.1198
Universal_GTPases	Translation elongation factor Tu	fig|6666666.148659.peg.371
Universal_GTPases	Translation initiation factor 2	fig|6666666.148659.peg.248
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.148659.peg.2022
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.148659.peg.1686
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.148659.peg.1577
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.148659.peg.871
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.148659.peg.234
V-Type_ATP_synthase	V-type ATP synthase subunit A (EC 3.6.3.14)	fig|6666666.148659.peg.1733
V-Type_ATP_synthase	V-type ATP synthase subunit B (EC 3.6.3.14)	fig|6666666.148659.peg.1734
V-Type_ATP_synthase	V-type ATP synthase subunit C (EC 3.6.3.14)	fig|6666666.148659.peg.1732
V-Type_ATP_synthase	V-type ATP synthase subunit D (EC 3.6.3.14)	fig|6666666.148659.peg.1735
V-Type_ATP_synthase	V-type ATP synthase subunit E (EC 3.6.3.14)	fig|6666666.148659.peg.1731
V-Type_ATP_synthase	V-type ATP synthase subunit I (EC 3.6.3.14)	fig|6666666.148659.peg.1736
V-Type_ATP_synthase	V-type ATP synthase subunit K (EC 3.6.3.14)	fig|6666666.148659.peg.1737
Valine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148659.peg.1037
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.148659.peg.1240
Valine_degradation	Butyryl-CoA dehydrogenase (EC 1.3.8.1)	fig|6666666.148659.peg.1033
Xanthine_Metabolism_in_Bacteria	Xanthine permease	fig|6666666.148659.peg.2085
Xanthine_Metabolism_in_Bacteria	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.148659.peg.2084
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.148659.peg.747
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.148659.peg.196
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148659.peg.742
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148659.peg.1659
YjeE	NAD(P)HX dehydratase	fig|6666666.148659.peg.67
YjeE	NAD(P)HX epimerase	fig|6666666.148659.peg.67
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.148659.peg.742
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.148659.peg.888
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.148659.peg.400
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.148659.peg.557
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.148659.peg.556
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.148659.peg.553
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148659.peg.558
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.148659.peg.696
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.148659.peg.555
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.148659.peg.557
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.148659.peg.556
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.148659.peg.558
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.148659.peg.554
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, broad substrate specificity, subgroup 3	fig|6666666.148659.peg.1936
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.148659.peg.1507
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.148659.peg.1506
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.148659.peg.1505
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.148659.peg.1504
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148659.peg.1682
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148659.peg.702
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148659.peg.844
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148659.peg.1925
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.148659.peg.1037
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148659.peg.1107
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.148659.peg.1759
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.148659.peg.720
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.148659.peg.261
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.148659.peg.385
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.148659.peg.167
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.148659.peg.503
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148659.peg.30
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.148659.peg.576
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148659.peg.535
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.148659.peg.1323
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.148659.peg.1095
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.148659.peg.886
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.148659.peg.1994
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.148659.peg.717
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148659.peg.1677
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.148659.peg.1712
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.148659.peg.572
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.148659.peg.918
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.148659.peg.918
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.148659.peg.700
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.148659.peg.882
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.148659.peg.882
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148659.peg.262
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.148659.peg.430
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.148659.peg.489
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148659.peg.937
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.148659.peg.937
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148659.peg.970
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.148659.peg.1202
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.148659.peg.257
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.148659.peg.1081
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.148659.peg.149
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.148659.peg.1805
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.148659.peg.1884
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.148659.peg.1510
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.148659.peg.2100
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.148659.peg.1996
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.148659.peg.1537
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.148659.peg.760
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.148659.peg.1322
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.148659.peg.165
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.148659.peg.1702
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.148659.peg.94
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.148659.peg.1960
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type	fig|6666666.148659.peg.924
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.148659.peg.304
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.148659.peg.952
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.148659.peg.2019
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.148659.peg.254
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.148659.peg.1093
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.148659.peg.1682
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.148659.peg.702
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.148659.peg.30
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.148659.peg.1634
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.148659.peg.1977
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.148659.peg.595
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.148659.peg.844
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.148659.peg.251
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.148659.peg.250
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.148659.peg.252
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.148659.peg.2021
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.148659.peg.1258
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.148659.peg.1013
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.148659.peg.1012
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148659.peg.931
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.148659.peg.1485
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.148659.peg.1684
tRNA_modification_Bacteria	Selenophosphate-dependent tRNA 2-selenouridine synthase	fig|6666666.148659.peg.1813
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.148659.peg.1967
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.148659.peg.922
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.148659.peg.710
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.148659.peg.21
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148659.peg.322
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148659.peg.501
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148659.peg.721
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148659.peg.1484
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.148659.peg.1925
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148659.peg.1979
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.148659.peg.479
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148659.peg.970
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148659.peg.705
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.148659.peg.765
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.148659.peg.198
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.148659.peg.706
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148659.peg.322
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.148659.peg.501
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.148659.peg.721
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.148659.peg.1484
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.148659.peg.1979
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.148659.peg.970
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.148659.peg.705
tRNAs	tRNA-Ala-GGC	fig|6666666.148659.rna.24
tRNAs	tRNA-Arg-ACG	fig|6666666.148659.rna.28
tRNAs	tRNA-Arg-ACG	fig|6666666.148659.rna.29
tRNAs	tRNA-Arg-CCG	fig|6666666.148659.rna.18
tRNAs	tRNA-Cys-GCA	fig|6666666.148659.rna.65
tRNAs	tRNA-Gly-CCC	fig|6666666.148659.rna.21
tRNAs	tRNA-Gly-GCC	fig|6666666.148659.rna.16
tRNAs	tRNA-Gly-GCC	fig|6666666.148659.rna.64
tRNAs	tRNA-Leu-CAA	fig|6666666.148659.rna.17
tRNAs	tRNA-Leu-CAG	fig|6666666.148659.rna.63
tRNAs	tRNA-Leu-GAG	fig|6666666.148659.rna.62
tRNAs	tRNA-Phe-GAA	fig|6666666.148659.rna.26
tRNAs	tRNA-Pro-CGG	fig|6666666.148659.rna.60
tRNAs	tRNA-Pro-GGG	fig|6666666.148659.rna.32
tRNAs	tRNA-Ser-GGA	fig|6666666.148659.rna.20
tRNAs	tRNA-Trp-CCA	fig|6666666.148659.rna.11
