16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229860.peg.1249
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229860.peg.1358
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.229860.peg.1360
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229860.peg.1215
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229860.peg.1359
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229860.peg.2249
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229860.peg.2524
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229860.peg.1508
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229860.peg.2377
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229860.peg.2402
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229860.peg.972
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229860.peg.2433
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229860.peg.2406
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229860.peg.2157
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229860.peg.2439
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229860.peg.827
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229860.peg.826
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229860.peg.2572
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)	fig|6666666.229860.peg.1565
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)	fig|6666666.229860.peg.1567
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1)	fig|6666666.229860.peg.1566
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.229860.peg.1213
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)	fig|6666666.229860.peg.335
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)	fig|6666666.229860.peg.333
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)	fig|6666666.229860.peg.332
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)	fig|6666666.229860.peg.331
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)	fig|6666666.229860.peg.2343
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)	fig|6666666.229860.peg.330
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229860.peg.2066
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229860.peg.2604
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)	fig|6666666.229860.peg.1434
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229860.peg.2068
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229860.peg.2606
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229860.peg.1287
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229860.peg.1515
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.229860.peg.277
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229860.peg.688
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229860.peg.1288
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229860.peg.1439
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229860.peg.2354
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229860.peg.2483
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229860.peg.2607
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229860.peg.1289
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229860.peg.1442
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229860.peg.1513
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229860.peg.276
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229860.peg.1290
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229860.peg.1443
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229860.peg.1512
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229860.peg.1842
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229860.peg.2065
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229860.peg.274
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229860.peg.1286
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229860.peg.1437
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229860.peg.1440
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229860.peg.1516
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229860.peg.1839
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229860.peg.1841
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229860.peg.275
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229860.peg.1441
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229860.peg.1840
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229860.peg.2605
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229860.peg.1229
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229860.peg.205
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229860.peg.206
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229860.peg.2515
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229860.peg.2346
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229860.peg.2000
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229860.peg.2346
Adhesion_of_Campylobacter	Fibronectin/fibrinogen-binding protein	fig|6666666.229860.peg.1017
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.229860.peg.1311
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.229860.peg.1310
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.229860.peg.2138
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.229860.peg.1313
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.229860.peg.1416
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.238
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.1796
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.2348
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229860.peg.629
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.229860.peg.2591
Allantoin_Utilization	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229860.peg.1501
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.13
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.116
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.214
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.467
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1140
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1248
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1581
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1743
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1939
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2242
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2353
Aminoglycoside_adenylyltransferases	Aminoglycoside N6'-acetyltransferase (EC 2.3.1.82)	fig|6666666.229860.peg.521
Aminopeptidases_(EC_3.4.11.-)	Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.24)	fig|6666666.229860.peg.359
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229860.peg.2156
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229860.peg.1090
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229860.peg.231
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229860.peg.1867
Ammonia_assimilation	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229860.peg.2053
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.229860.peg.2135
Anaerobic_respiratory_reductases	Flavodoxin reductases (ferredoxin-NADPH reductases) family 1	fig|6666666.229860.peg.87
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229860.peg.1045
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229860.peg.1045
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229860.peg.1564
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229860.peg.1564
Arginine_Deiminase_Pathway	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229860.peg.2010
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229860.peg.218
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229860.peg.1564
Arginine_and_Ornithine_Degradation	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229860.peg.1405
Arginine_and_Ornithine_Degradation	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229860.peg.2010
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229860.peg.218
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229860.peg.1503
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229860.peg.1564
Arginine_and_Ornithine_Degradation	Ornithine cyclodeaminase (EC 4.3.1.12)	fig|6666666.229860.peg.1152
Arginine_and_Ornithine_Degradation	Ornithine cyclodeaminase (EC 4.3.1.12)	fig|6666666.229860.peg.2484
Arginine_and_Ornithine_Degradation	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229860.peg.1405
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229860.peg.1399
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229860.peg.2197
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229860.peg.1109
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229860.peg.1354
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229860.peg.1238
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229860.peg.1994
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229860.peg.1249
Bacterial_Cell_Division	Cell division protein FtsJ	fig|6666666.229860.peg.767
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229860.peg.2273
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229860.peg.2623
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229860.peg.1358
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229860.peg.1355
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229860.peg.1356
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229860.peg.415
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229860.peg.1059
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229860.peg.1353
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.229860.peg.1360
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229860.peg.930
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229860.peg.643
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229860.peg.1863
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229860.peg.828
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229860.peg.1218
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229860.peg.1217
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229860.peg.1216
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.229860.peg.348
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229860.peg.695
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229860.peg.1359
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229860.peg.1109
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229860.peg.1354
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229860.peg.1249
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229860.peg.2273
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229860.peg.2623
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229860.peg.1358
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229860.peg.1355
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229860.peg.1356
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229860.peg.1353
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.229860.peg.1360
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229860.peg.643
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229860.peg.1863
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229860.peg.499
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229860.peg.644
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229860.peg.1864
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229860.peg.1218
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229860.peg.1217
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229860.peg.1216
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229860.peg.1214
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.229860.peg.348
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229860.peg.2273
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229860.peg.2623
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229860.peg.1128
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229860.peg.956
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229860.peg.1464
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2145
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2159
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2362
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229860.peg.1102
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229860.peg.148
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.229860.peg.1521
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229860.peg.1215
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.229860.peg.1218
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.229860.peg.1217
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.229860.peg.1216
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.229860.peg.1214
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.229860.peg.348
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.229860.peg.818
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.229860.peg.818
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229860.peg.1631
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229860.peg.819
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229860.peg.2466
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229860.peg.607
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229860.peg.2318
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229860.peg.2512
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229860.peg.2513
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229860.peg.695
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229860.peg.594
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229860.peg.249
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.229860.peg.588
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily I	fig|6666666.229860.peg.1041
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.229860.peg.2555
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229860.peg.952
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229860.peg.1251
Biotin_biosynthesis	Biotin operon repressor	fig|6666666.229860.peg.2411
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229860.peg.2411
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229860.peg.71
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229860.peg.951
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229860.peg.953
Biotin_biosynthesis	predicted biotin regulatory protein BioR (GntR family)	fig|6666666.229860.peg.2311
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229860.peg.1522
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229860.peg.858
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229860.peg.1470
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229860.peg.1968
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229860.peg.2603
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229860.peg.1093
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229860.peg.1409
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229860.peg.1408
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229860.peg.1410
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229860.peg.25
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229860.peg.611
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229860.peg.22
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229860.peg.24
CBSS-176299.4.peg.1996A	Endoribonuclease L-PSP	fig|6666666.229860.peg.613
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229860.peg.1537
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229860.peg.1699
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229860.peg.1793
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229860.peg.1794
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229860.peg.1795
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229860.peg.245
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229860.peg.2035
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229860.peg.205
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229860.peg.206
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229860.peg.1243
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229860.peg.1490
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229860.peg.1870
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229860.peg.1559
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.229860.peg.685
CBSS-258594.1.peg.3339	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.229860.peg.1086
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229860.peg.839
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229860.peg.1196
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229860.peg.839
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229860.peg.1196
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229860.peg.1349
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229860.peg.1350
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229860.peg.2367
CBSS-292415.3.peg.2341	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229860.peg.296
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229860.peg.21
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229860.peg.1133
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229860.peg.1131
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229860.peg.79
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229860.peg.349
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229860.peg.350
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229860.peg.598
CBSS-314276.3.peg.1499	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229860.peg.2616
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229860.peg.1620
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.229860.peg.1622
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.229860.peg.1621
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.229860.peg.975
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229860.peg.1747
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229860.peg.2211
CBSS-316057.3.peg.1308	RNA polymerase sigma-54 factor RpoN	fig|6666666.229860.peg.295
CBSS-316273.3.peg.227	Alpha-2-macroglobulin	fig|6666666.229860.peg.542
CBSS-316273.3.peg.227	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229860.peg.538
CBSS-316273.3.peg.2709	Superfamily II DNA/RNA helicases, SNF2 family	fig|6666666.229860.peg.197
CBSS-316407.3.peg.2816	Protein of unknown function DUF541	fig|6666666.229860.peg.1013
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229860.peg.2346
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229860.peg.2346
CBSS-323098.3.peg.2823	Flagellar motor rotation protein MotB	fig|6666666.229860.peg.2474
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229860.peg.1321
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229860.peg.1323
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229860.peg.296
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229860.peg.532
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229860.peg.2660
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229860.peg.2442
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229860.peg.443
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229860.peg.1222
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229860.peg.1221
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229860.peg.1556
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229860.peg.2382
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229860.peg.1217
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229860.peg.1216
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.229860.peg.348
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229860.peg.1254
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229860.peg.1269
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229860.peg.1270
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229860.peg.2619
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229860.peg.361
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229860.peg.2364
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229860.peg.1044
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229860.peg.2231
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.238
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.1796
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.2348
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229860.peg.788
CBSS-393130.3.peg.794	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229860.peg.2662
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229860.peg.2635
CBSS-469378.4.peg.430	FIG002344: Hydrolase (HAD superfamily)	fig|6666666.229860.peg.2212
CBSS-469378.4.peg.430	RecA protein	fig|6666666.229860.peg.1623
CBSS-521098.4.peg.1460	FIG001614: Membrane protein	fig|6666666.229860.peg.2269
CBSS-521098.4.peg.1460	FIG015373: Membrane protein	fig|6666666.229860.peg.2268
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229860.peg.1317
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229860.peg.2136
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229860.peg.2137
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.229860.peg.1319
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229860.peg.1318
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229860.peg.1320
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229860.peg.1320
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229860.peg.382
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229860.peg.354
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229860.peg.1296
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229860.peg.1249
CBSS-83331.1.peg.3039	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229860.peg.355
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229860.peg.1215
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229860.peg.352
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.238
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.1796
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.2348
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229860.peg.1520
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229860.peg.1845
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229860.peg.974
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229860.peg.1090
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229860.peg.957
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229860.peg.956
CMP-N-acetylneuraminate_Biosynthesis	N-acetylneuraminate synthase (EC 2.5.1.56)	fig|6666666.229860.peg.1534
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229860.peg.2130
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229860.peg.2129
CRISPRs	CRISPR-associated protein, Csn1 family	fig|6666666.229860.peg.2131
CRISPRs	CRISPR-associated protein, Csn2 family	fig|6666666.229860.peg.2128
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229860.peg.2549
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229860.peg.302
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229860.peg.1136
Cadmium_resistance	Cadmium efflux system accessory protein	fig|6666666.229860.peg.1188
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229860.peg.2119
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229860.peg.1084
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229860.peg.98
Calvin-Benson_cycle	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229860.peg.960
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229860.peg.2108
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229860.peg.2637
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.229860.peg.1255
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229860.peg.1323
Carbon_Starvation	Carbon starvation protein A	fig|6666666.229860.peg.2440
Carbon_Starvation	Carbon storage regulator	fig|6666666.229860.peg.341
Carbon_storage_regulator	Carbon storage regulator	fig|6666666.229860.peg.341
Carbon_storage_regulator	Flagellar assembly factor FliW	fig|6666666.229860.peg.342
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229860.peg.2454
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229860.peg.643
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229860.peg.1863
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229860.peg.499
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229860.peg.644
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229860.peg.1864
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229860.peg.2158
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229860.peg.2453
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229860.peg.2218
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229860.peg.2219
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229860.peg.506
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229860.peg.302
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229860.peg.1136
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229860.peg.299
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229860.peg.301
Cell_Division_Subsystem_including_YidCD	RNA-binding protein Jag	fig|6666666.229860.peg.303
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229860.peg.300
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229860.peg.140
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229860.peg.1665
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229860.peg.1109
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229860.peg.1238
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229860.peg.1994
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229860.peg.1037
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229860.peg.1835
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229860.peg.602
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229860.peg.2030
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229860.peg.1490
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229860.peg.1275
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229860.peg.1226
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily S (as in PMID19099556)	fig|6666666.229860.peg.27
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229860.peg.2661
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229860.peg.961
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229860.peg.962
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229860.peg.2347
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229860.peg.915
Chorismate_Synthesis	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229860.peg.1070
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229860.peg.1385
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229860.peg.961
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229860.peg.962
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229860.peg.249
Citrate_Metabolism,_Transport,_and_Regulation	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)	fig|6666666.229860.peg.1050
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase alpha chain (EC 4.1.3.6)	fig|6666666.229860.peg.970
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.229860.peg.969
Citrate_Metabolism,_Transport,_and_Regulation	[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	fig|6666666.229860.peg.1051
ClpAS_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229860.peg.553
ClpAS_cluster	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229860.peg.554
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229860.peg.943
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229860.peg.1039
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229860.peg.961
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229860.peg.962
CoA_disulfide_thiol-disulfide_redox_system	CoA-disulfide reductase (EC 1.8.1.14)	fig|6666666.229860.peg.2294
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.229860.peg.314
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.229860.peg.307
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229860.peg.312
Cobalamin_synthesis	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	fig|6666666.229860.peg.2240
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229860.peg.1363
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229860.peg.1861
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.229860.peg.2581
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.229860.peg.1856
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.229860.peg.1862
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.229860.peg.1001
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.229860.peg.1855
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.229860.peg.2677
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.229860.peg.371
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.229860.peg.2580
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.229860.peg.2551
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.229860.peg.1615
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.229860.peg.2582
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229860.peg.1844
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229860.peg.414
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229860.peg.2368
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.229860.peg.2107
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229860.peg.963
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229860.peg.1196
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229860.peg.289
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229860.peg.932
Colicin_V_and_Bacteriocin_Production_Cluster	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229860.peg.1877
Colicin_V_and_Bacteriocin_Production_Cluster	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229860.peg.292
Colicin_V_and_Bacteriocin_Production_Cluster	Colicin V production protein	fig|6666666.229860.peg.762
Colicin_V_and_Bacteriocin_Production_Cluster	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229860.peg.1427
Colicin_V_and_Bacteriocin_Production_Cluster	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229860.peg.1427
Colicin_V_and_Bacteriocin_Production_Cluster	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229860.peg.422
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229860.peg.2661
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229860.peg.961
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229860.peg.962
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229860.peg.2347
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229860.peg.915
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229860.peg.1385
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229860.peg.961
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229860.peg.962
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229860.peg.249
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229860.peg.1349
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229860.peg.159
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229860.peg.957
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229860.peg.956
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229860.peg.1035
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229860.peg.608
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229860.peg.2637
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229860.peg.1350
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Serine/threonine protein kinase PrkC, regulator of stationary phase	fig|6666666.229860.peg.958
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2145
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2159
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2362
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229860.peg.1102
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229860.peg.148
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229860.peg.2357
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229860.peg.121
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229860.peg.122
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229860.peg.1187
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229860.peg.1991
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229860.peg.2445
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229860.peg.1187
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229860.peg.1991
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229860.peg.2445
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.229860.peg.445
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229860.peg.1317
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229860.peg.2136
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229860.peg.2137
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229860.peg.2289
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229860.peg.2289
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229860.peg.1501
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	D-glycerate transporter (predicted)	fig|6666666.229860.peg.2243
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.13
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.116
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.214
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.467
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1140
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1248
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1581
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1743
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1939
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2242
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2353
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229860.peg.1501
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	D-glycerate transporter (predicted)	fig|6666666.229860.peg.2243
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.13
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.116
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.214
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.467
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1140
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1248
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1581
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1743
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1939
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2242
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2353
D-ribose_utilization	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229860.peg.960
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229860.peg.2108
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229860.peg.2342
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229860.peg.1044
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229860.peg.964
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229860.peg.121
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229860.peg.122
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229860.peg.495
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229860.peg.2158
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229860.peg.2453
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229860.peg.2646
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.229860.peg.1034
DNA_processing_cluster	Protein involved in catabolism of external DNA	fig|6666666.229860.peg.2161
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229860.peg.1033
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229860.peg.1492
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229860.peg.1201
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229860.peg.215
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229860.peg.1531
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229860.peg.137
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229860.peg.1521
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229860.peg.1261
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229860.peg.966
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229860.peg.1023
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229860.peg.1952
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.229860.peg.78
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229860.peg.1485
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229860.peg.616
DNA_repair,_bacterial	Exonuclease SbcC	fig|6666666.229860.peg.2275
DNA_repair,_bacterial	Exonuclease SbcD	fig|6666666.229860.peg.2276
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229860.peg.983
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229860.peg.2231
DNA_repair,_bacterial	RecA protein	fig|6666666.229860.peg.1623
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229860.peg.200
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229860.peg.642
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229860.peg.924
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229860.peg.1791
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229860.peg.750
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229860.peg.615
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229860.peg.2631
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.229860.peg.1121
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229860.peg.2133
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.229860.peg.2038
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229860.peg.2219
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229860.peg.2037
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.229860.peg.1623
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229860.peg.1033
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229860.peg.200
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229860.peg.642
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229860.peg.924
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229860.peg.1791
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229860.peg.495
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.229860.peg.1623
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase Rep	fig|6666666.229860.peg.1591
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229860.peg.361
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229860.peg.2364
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229860.peg.2631
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.229860.peg.1623
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229860.peg.1035
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229860.peg.2454
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229860.peg.2158
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229860.peg.2453
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229860.peg.2218
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229860.peg.2219
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.229860.peg.444
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.229860.peg.1076
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.229860.peg.105
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229860.peg.1349
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229860.peg.2158
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229860.peg.2453
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229860.peg.566
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229860.peg.443
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229860.peg.1073
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229860.peg.292
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.229860.peg.827
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.229860.peg.1294
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.229860.peg.1788
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.229860.peg.1789
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229860.peg.827
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.229860.peg.1295
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.229860.peg.1167
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.229860.peg.1283
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229860.peg.826
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229860.peg.2515
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.229860.peg.2317
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.229860.peg.2317
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.229860.peg.577
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.229860.peg.1517
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.229860.peg.1517
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229860.peg.1500
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229860.peg.574
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229860.peg.437
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229860.peg.2013
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229860.peg.2000
Deoxyribose_and_Deoxynucleoside_Catabolism	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229860.peg.494
Dihydroxyacetone_kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), ADP-binding subunit	fig|6666666.229860.peg.337
Dihydroxyacetone_kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), dihydroxyacetone binding subunit	fig|6666666.229860.peg.336
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229860.peg.459
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229860.peg.952
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229860.peg.1251
ECF_class_transporters	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229860.peg.546
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.523
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.994
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.998
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.1589
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.1594
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.2170
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.2191
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.2206
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.2613
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229860.peg.522
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229860.peg.992
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229860.peg.1000
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229860.peg.1588
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229860.peg.1596
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229860.peg.2168
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229860.peg.2189
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229860.peg.2208
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229860.peg.2611
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229860.peg.951
ECF_class_transporters	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229860.peg.547
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.524
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.993
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.999
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.1590
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.1595
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.2169
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.2190
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.2207
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229860.peg.2612
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229860.peg.953
ECF_class_transporters	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229860.peg.545
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229860.peg.2289
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229860.peg.2289
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229860.peg.1546
Entner-Doudoroff_Pathway	Hexokinase (EC 2.7.1.1)	fig|6666666.229860.peg.229
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229860.peg.1084
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229860.peg.98
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229860.peg.905
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229860.peg.2628
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229860.peg.120
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229860.peg.1559
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229860.peg.2410
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.229860.peg.1143
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229860.peg.1669
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229860.peg.1870
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.229860.peg.1878
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229860.peg.1877
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.229860.peg.1477
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229860.peg.1875
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229860.peg.1876
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.229860.peg.820
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.229860.peg.1869
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229860.peg.1559
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229860.peg.2109
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229860.peg.2410
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229860.peg.1559
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229860.peg.2377
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229860.peg.2402
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.229860.peg.1502
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229860.peg.2109
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229860.peg.2410
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229860.peg.765
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229860.peg.1078
Flagellar_motility	Flagellar basal-body rod modification protein FlgD	fig|6666666.229860.peg.2470
Flagellar_motility	Flagellar biosynthesis protein FlhA	fig|6666666.229860.peg.2398
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229860.peg.393
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229860.peg.2399
Flagellar_motility	Flagellar biosynthesis protein FlhF	fig|6666666.229860.peg.2552
Flagellar_motility	Flagellar biosynthesis protein FliR	fig|6666666.229860.peg.2400
Flagellar_motility	Flagellar motor rotation protein MotA	fig|6666666.229860.peg.2473
Flagellar_motility	Flagellar motor rotation protein MotB	fig|6666666.229860.peg.2474
Flagellar_motility	Flagellar motor switch protein FliM	fig|6666666.229860.peg.2476
Flagellar_motility	Flagellar motor switch protein FliN	fig|6666666.229860.peg.2477
Flagellar_motility	Flagellar synthesis regulator FleN	fig|6666666.229860.peg.2553
Flagellar_motility	Flagellum-specific ATP synthase FliI	fig|6666666.229860.peg.1339
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.229860.peg.295
Flagellar_motility	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229860.peg.1081
Flagellum	Flagellar M-ring protein FliF	fig|6666666.229860.peg.1342
Flagellum	Flagellar assembly protein FliH	fig|6666666.229860.peg.1340
Flagellum	Flagellar basal-body rod modification protein FlgD	fig|6666666.229860.peg.2470
Flagellum	Flagellar basal-body rod protein FlgB	fig|6666666.229860.peg.1345
Flagellum	Flagellar basal-body rod protein FlgC	fig|6666666.229860.peg.1344
Flagellum	Flagellar basal-body rod protein FlgF	fig|6666666.229860.peg.1496
Flagellum	Flagellar basal-body rod protein FlgG	fig|6666666.229860.peg.1495
Flagellum	Flagellar biosynthesis protein FlhA	fig|6666666.229860.peg.2398
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229860.peg.393
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229860.peg.2399
Flagellum	Flagellar biosynthesis protein FlhF	fig|6666666.229860.peg.2552
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229860.peg.375
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229860.peg.2475
Flagellum	Flagellar biosynthesis protein FliP	fig|6666666.229860.peg.2479
Flagellum	Flagellar biosynthesis protein FliQ	fig|6666666.229860.peg.2401
Flagellum	Flagellar biosynthesis protein FliR	fig|6666666.229860.peg.2400
Flagellum	Flagellar biosynthesis protein FliS	fig|6666666.229860.peg.2327
Flagellum	Flagellar biosynthesis protein FliZ	fig|6666666.229860.peg.2478
Flagellum	Flagellar hook protein FlgE	fig|6666666.229860.peg.2471
Flagellum	Flagellar hook-associated protein FlgK	fig|6666666.229860.peg.344
Flagellum	Flagellar hook-associated protein FlgL	fig|6666666.229860.peg.343
Flagellum	Flagellar hook-associated protein FliD	fig|6666666.229860.peg.1098
Flagellum	Flagellar hook-basal body complex protein FliE	fig|6666666.229860.peg.1343
Flagellum	Flagellar hook-length control protein FliK	fig|6666666.229860.peg.2469
Flagellum	Flagellar motor rotation protein MotA	fig|6666666.229860.peg.2473
Flagellum	Flagellar motor rotation protein MotB	fig|6666666.229860.peg.2474
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229860.peg.1277
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229860.peg.1341
Flagellum	Flagellar motor switch protein FliM	fig|6666666.229860.peg.2476
Flagellum	Flagellar motor switch protein FliN	fig|6666666.229860.peg.2477
Flagellum	Flagellar protein FlbB	fig|6666666.229860.peg.1233
Flagellum	Flagellar protein FlbD	fig|6666666.229860.peg.2472
Flagellum	Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)	fig|6666666.229860.peg.1494
Flagellum	Flagellar protein FliJ	fig|6666666.229860.peg.1338
Flagellum	Flagellar synthesis regulator FleN	fig|6666666.229860.peg.2553
Flagellum	Flagellin protein FlaA	fig|6666666.229860.peg.1095
Flagellum	Flagellin protein FlaA	fig|6666666.229860.peg.1096
Flagellum	Flagellin protein FlaA	fig|6666666.229860.peg.1498
Flagellum	Flagellin protein FlaG	fig|6666666.229860.peg.1097
Flagellum	Flagellum-specific ATP synthase FliI	fig|6666666.229860.peg.1339
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229860.peg.1221
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229860.peg.1556
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229860.peg.2382
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.229860.peg.295
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229860.peg.1249
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgB	fig|6666666.229860.peg.1345
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgC	fig|6666666.229860.peg.1344
Flagellum_in_Campylobacter	Flagellar hook-basal body complex protein FliE	fig|6666666.229860.peg.1343
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229860.peg.1095
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229860.peg.1096
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229860.peg.1498
Flavodoxin	Flavodoxin	fig|6666666.229860.peg.1381
Flavodoxin	Flavodoxin	fig|6666666.229860.peg.1691
Flavodoxin	Flavodoxin	fig|6666666.229860.peg.2185
Flavodoxin	Flavodoxin	fig|6666666.229860.peg.2283
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229860.peg.1508
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229860.peg.1427
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229860.peg.1427
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229860.peg.2017
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.229860.peg.2147
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229860.peg.1238
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229860.peg.1994
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229860.peg.1037
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229860.peg.1226
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229860.peg.515
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229860.peg.1002
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229860.peg.1117
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229860.peg.2366
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229860.peg.804
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229860.peg.516
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229860.peg.517
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229860.peg.95
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229860.peg.95
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229860.peg.1117
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229860.peg.82
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229860.peg.838
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.229860.peg.1993
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229860.peg.1503
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229860.peg.1503
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229860.peg.289
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229860.peg.932
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229860.peg.747
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229860.peg.1124
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229860.peg.231
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229860.peg.1867
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229860.peg.2053
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229860.peg.1503
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229860.peg.1503
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229860.peg.296
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229860.peg.2193
Glutathione:_Redox_cycle	Glutathione peroxidase (EC 1.11.1.9)	fig|6666666.229860.peg.83
Glycerate_metabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229860.peg.1501
Glycerate_metabolism	D-glycerate transporter (predicted)	fig|6666666.229860.peg.2243
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.13
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.116
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.214
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.467
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1140
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1248
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1581
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1743
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1939
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2242
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2353
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229860.peg.120
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229860.peg.812
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.229860.peg.606
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.229860.peg.2077
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229860.peg.2310
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229860.peg.2594
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229860.peg.593
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229860.peg.1537
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229860.peg.1699
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Probable glycerol transport protein	fig|6666666.229860.peg.1700
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229860.peg.1551
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229860.peg.1477
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229860.peg.2377
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229860.peg.2402
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229860.peg.141
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229860.peg.1204
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229860.peg.2571
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229860.peg.2658
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.13
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.116
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.214
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.467
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1140
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1248
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1581
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1743
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1939
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2242
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2353
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229860.peg.812
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229860.peg.2310
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229860.peg.2594
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229860.peg.593
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229860.peg.353
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229860.peg.491
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229860.peg.298
Glycine_Biosynthesis	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.229860.peg.2449
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229860.peg.2572
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229860.peg.491
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229860.peg.974
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229860.peg.978
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.13
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.116
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.214
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.467
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1140
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1248
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1581
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1743
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1939
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2242
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2353
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.229860.peg.975
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229860.peg.976
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229860.peg.977
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229860.peg.1066
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229860.peg.1065
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229860.peg.760
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229860.peg.2572
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229860.peg.388
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229860.peg.974
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229860.peg.972
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.229860.peg.975
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229860.peg.976
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229860.peg.977
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B alpha subunit (EC 1.21.4.4)	fig|6666666.229860.peg.2375
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229860.peg.2372
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229860.peg.2373
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229860.peg.2374
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B alpha subunit (EC 1.21.4.2)	fig|6666666.229860.peg.557
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B beta subunit (EC 1.21.4.2)	fig|6666666.229860.peg.557
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229860.peg.558
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229860.peg.559
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229860.peg.560
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 1	fig|6666666.229860.peg.2209
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 2	fig|6666666.229860.peg.2210
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229860.peg.1744
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229860.peg.1745
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229860.peg.1746
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229860.peg.1747
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229860.peg.2211
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229860.peg.1748
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229860.peg.309
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229860.peg.703
Glycogen_metabolism	Glycogen branching enzyme, GH-57-type, archaeal (EC 2.4.1.18)	fig|6666666.229860.peg.1417
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229860.peg.2350
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229860.peg.288
Glycogen_metabolism	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229860.peg.1014
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229860.peg.2524
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229860.peg.1546
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229860.peg.2119
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229860.peg.2657
Glycolysis_and_Gluconeogenesis	Hexokinase (EC 2.7.1.1)	fig|6666666.229860.peg.229
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229860.peg.1084
Glycolysis_and_Gluconeogenesis	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229860.peg.2111
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229860.peg.98
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229860.peg.905
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229860.peg.2628
Glycolysis_and_Gluconeogenesis	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit (EC 2.7.1.90)	fig|6666666.229860.peg.2388
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.229860.peg.1032
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229860.peg.120
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229860.peg.1071
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229860.peg.1650
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229860.peg.1323
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229860.peg.2037
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229860.peg.828
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229860.peg.2432
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229860.peg.1317
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229860.peg.2136
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229860.peg.2137
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229860.peg.1318
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229860.peg.1320
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229860.peg.597
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229860.peg.1849
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229860.peg.1850
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229860.peg.1383
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229860.peg.1558
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229860.peg.1851
HPr_catabolite_repression_system	Catabolite repression HPr-like protein Crh	fig|6666666.229860.peg.1268
HPr_catabolite_repression_system	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229860.peg.1267
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229860.peg.597
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229860.peg.1849
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229860.peg.1850
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229860.peg.1851
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.229860.peg.1104
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.229860.peg.1382
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229860.peg.425
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229860.peg.844
Heat_shock_dnaK_gene_cluster_extended	Signal peptidase-like protein	fig|6666666.229860.peg.2333
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229860.peg.830
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229860.peg.2249
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229860.peg.835
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229860.peg.1106
Heme_biosynthesis_orphans	Radical SAM domain heme biosynthesis protein	fig|6666666.229860.peg.887
Hfl_operon	GTP-binding protein HflX	fig|6666666.229860.peg.2488
Hfl_operon	HflC protein	fig|6666666.229860.peg.1234
Hfl_operon	HflK protein	fig|6666666.229860.peg.1235
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229860.peg.2157
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.229860.peg.1879
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.229860.peg.2405
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.229860.peg.2627
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229860.peg.1463
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229860.peg.425
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229860.peg.2146
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229860.peg.2361
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2145
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2159
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2362
Hypothetical_protein_HNE_2485	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229860.peg.2679
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229860.peg.237
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229860.peg.558
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229860.peg.560
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229860.peg.1744
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229860.peg.1746
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229860.peg.2372
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229860.peg.2374
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.229860.peg.77
Integrons	Integron integrase IntIPac	fig|6666666.229860.peg.873
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229860.peg.2456
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229860.peg.1349
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229860.peg.1320
Inteins	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229860.peg.2111
Inteins	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229860.peg.1693
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229860.peg.1236
Inteins	Translation initiation factor 2	fig|6666666.229860.peg.1408
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, ATP-binding subunit	fig|6666666.229860.peg.1057
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, permease protein 2	fig|6666666.229860.peg.1058
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, substrate binding protein	fig|6666666.229860.peg.1060
Iron_transport_system_including_ABC_transporter	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229860.peg.1062
Iron_transport_system_including_ABC_transporter	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229860.peg.1061
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229860.peg.1045
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229860.peg.354
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229860.peg.817
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229860.peg.1296
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229860.peg.403
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229860.peg.404
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229860.peg.1229
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229860.peg.1415
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229860.peg.1045
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229860.peg.352
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229860.peg.1045
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229860.peg.1045
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229860.peg.1045
Isoprenoinds_for_Quinones	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229860.peg.803
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229860.peg.352
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229860.peg.1612
KH_domain_RNA_binding_protein_YlqC	KH domain RNA binding protein YlqC	fig|6666666.229860.peg.1613
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229860.peg.1614
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.229860.peg.1984
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229860.peg.270
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229860.peg.268
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229860.peg.269
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229860.peg.271
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229860.peg.266
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229860.peg.267
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229860.peg.1764
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229860.peg.21
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229860.peg.1133
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229860.peg.1212
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229860.peg.1117
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229860.peg.82
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229860.peg.838
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229860.peg.396
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229860.peg.475
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229860.peg.2007
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229860.peg.471
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	fig|6666666.229860.peg.472
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229860.peg.21
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229860.peg.1133
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229860.peg.82
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229860.peg.838
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229860.peg.972
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-)	fig|6666666.229860.peg.1757
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229860.peg.1022
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229860.peg.1031
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229860.peg.2590
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229860.peg.106
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229860.peg.395
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229860.peg.2619
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229860.peg.1173
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229860.peg.2422
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229860.peg.698
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229860.peg.697
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229860.peg.699
LysR-family_proteins_in_Escherichia_coli	Chromosome initiation inhibitor	fig|6666666.229860.peg.2062
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229860.peg.1824
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229860.peg.2234
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229860.peg.2301
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.229860.peg.2383
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229860.peg.1222
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229860.peg.1221
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229860.peg.1556
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229860.peg.2382
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229860.peg.221
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229860.peg.148
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229860.peg.1317
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229860.peg.2136
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229860.peg.2137
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229860.peg.1471
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229860.peg.1632
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.229860.peg.2522
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229860.peg.309
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229860.peg.1212
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229860.peg.288
Maltose_and_Maltodextrin_Utilization	Oligo-1,6-glucosidase (EC 3.2.1.10)	fig|6666666.229860.peg.2339
Mannitol_Utilization	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229860.peg.1267
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229860.peg.2366
MazEF_toxin-antitoxing_(programmed_cell_death)_system	Programmed cell death antitoxin YdcD	fig|6666666.229860.peg.2667
MazEF_toxin-antitoxing_(programmed_cell_death)_system	Programmed cell death toxin YdcE	fig|6666666.229860.peg.2666
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229860.peg.1520
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229860.peg.1845
Methanogenesis_strays	Ni2+-binding GTPase involved in regulation of expression and maturation of hydrogenase	fig|6666666.229860.peg.1988
Methanogenesis_strays	Uncharacterized ABC transporter ATP-binding protein MJ0121	fig|6666666.229860.peg.1989
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229860.peg.888
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229860.peg.1921
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.229860.peg.488
Methionine_Degradation	Methionine transporter MetT	fig|6666666.229860.peg.485
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229860.peg.489
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229860.peg.1814
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229860.peg.2346
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229860.peg.228
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229860.peg.2346
Methionine_Salvage	5-methylthioribose kinase (EC 2.7.1.100)	fig|6666666.229860.peg.1786
Methionine_Salvage	Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)	fig|6666666.229860.peg.934
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229860.peg.141
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229860.peg.141
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229860.peg.296
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229860.peg.2193
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229860.peg.2624
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229860.peg.1021
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229860.peg.835
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32)	fig|6666666.229860.peg.1053
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32)	fig|6666666.229860.peg.1052
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.989
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.1450
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.1561
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.1676
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.1859
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.2110
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.2126
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.2160
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229860.peg.219
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229860.peg.2531
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229860.peg.1520
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229860.peg.1845
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229860.peg.532
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229860.peg.99
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229860.peg.1975
Murein_Hydrolases	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	fig|6666666.229860.peg.418
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229860.peg.272
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229860.peg.273
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229860.peg.302
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229860.peg.1136
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Protein YidD	fig|6666666.229860.peg.301
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	RNA-binding protein Jag	fig|6666666.229860.peg.303
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.229860.peg.527
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.229860.peg.526
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.229860.peg.525
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229860.peg.1458
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229860.peg.1457
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229860.peg.1456
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229860.peg.2167
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229860.peg.1731
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229860.peg.1336
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229860.peg.2428
N-linked_Glycosylation_in_Bacteria	Phospholipid-lipopolysaccharide ABC transporter	fig|6666666.229860.peg.262
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229860.peg.21
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229860.peg.1133
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229860.peg.2442
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.229860.peg.1172
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229860.peg.1005
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.229860.peg.1172
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229860.peg.2272
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.229860.peg.26
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229860.peg.829
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.229860.peg.1182
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229860.peg.1181
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229860.peg.1656
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229860.peg.1657
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229860.peg.1658
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229860.peg.1659
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229860.peg.1660
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Sodium-dependent phosphate transporter	fig|6666666.229860.peg.771
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229860.peg.516
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229860.peg.517
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.229860.peg.1986
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.229860.peg.1985
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229860.peg.354
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229860.peg.817
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229860.peg.1296
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229860.peg.403
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229860.peg.404
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229860.peg.1229
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229860.peg.1415
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229860.peg.409
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229860.peg.2442
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229860.peg.1463
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229860.peg.1406
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229860.peg.1409
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229860.peg.1407
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229860.peg.1408
Omega_peptidases_(EC_3.4.19.-)	Acylamino-acid-releasing enzyme (EC 3.4.19.1)	fig|6666666.229860.peg.2351
Omega_peptidases_(EC_3.4.19.-)	Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	fig|6666666.229860.peg.2270
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229860.peg.1508
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229860.peg.2433
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229860.peg.2406
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229860.peg.2439
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229860.peg.2439
Oxidative_stress	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229860.peg.2441
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.229860.peg.816
Oxidative_stress	Rubrerythrin	fig|6666666.229860.peg.2039
Oxidative_stress	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229860.peg.20
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.229860.peg.2618
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229860.peg.960
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229860.peg.2108
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229860.peg.2515
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229860.peg.2637
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.229860.peg.1255
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229860.peg.1767
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229860.peg.1767
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229860.peg.1249
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229860.peg.311
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229860.peg.1520
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229860.peg.1845
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229860.peg.1124
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229860.peg.72
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229860.peg.1215
Peptidoglycan_Biosynthesis	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229860.peg.538
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.229860.peg.439
Peptidoglycan_Biosynthesis	Rare lipoprotein A precursor	fig|6666666.229860.peg.706
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.229860.peg.1214
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229860.peg.2356
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229860.peg.1837
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229860.peg.761
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229860.peg.1426
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229860.peg.2092
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229860.peg.1357
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229860.peg.311
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229860.peg.1426
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229860.peg.2092
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--L-ornithine ligase	fig|6666666.229860.peg.1667
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229860.peg.1357
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.229860.peg.2117
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229860.peg.408
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229860.peg.804
Periplasmic_Stress_Response	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229860.peg.355
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229860.peg.2632
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegS	fig|6666666.229860.peg.394
Persister_Cells	HipA protein	fig|6666666.229860.peg.1967
Phage_capsid_proteins	Phage capsid scaffolding protein	fig|6666666.229860.peg.190
Phage_capsid_proteins	Phage head maturation protease	fig|6666666.229860.peg.51
Phage_capsid_proteins	Phage minor capsid protein	fig|6666666.229860.peg.177
Phage_capsid_proteins	Phage minor capsid protein	fig|6666666.229860.peg.179
Phage_capsid_proteins	Phage minor capsid protein	fig|6666666.229860.peg.185
Phage_packaging_machinery	Phage portal protein	fig|6666666.229860.peg.50
Phage_packaging_machinery	Phage portal protein	fig|6666666.229860.peg.680
Phage_packaging_machinery	Phage terminase large subunit	fig|6666666.229860.peg.49
Phage_packaging_machinery	Phage terminase, large subunit	fig|6666666.229860.peg.180
Phage_packaging_machinery	Phage terminase, large subunit	fig|6666666.229860.peg.682
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229860.peg.2456
Phage_replication	DNA primase/helicase, phage-associated	fig|6666666.229860.peg.649
Phage_replication	Phage replication initiation protein	fig|6666666.229860.peg.44
Phage_tail_fiber_proteins	Phage tail fiber protein	fig|6666666.229860.peg.60
Phage_tail_fiber_proteins	Phage tail fiber protein	fig|6666666.229860.peg.653
Phage_tail_proteins	Phage tail length tape-measure protein	fig|6666666.229860.peg.660
Phage_tail_proteins_2	Phage tail length tape-measure protein	fig|6666666.229860.peg.660
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229860.peg.366
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229860.peg.441
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229860.peg.892
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229860.peg.967
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229860.peg.442
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death antitoxin YdcD	fig|6666666.229860.peg.2667
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death toxin MazF like	fig|6666666.229860.peg.123
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death toxin YdcE	fig|6666666.229860.peg.2666
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229860.peg.1070
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.229860.peg.1499
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229860.peg.1366
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229860.peg.1367
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.229860.peg.1368
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229860.peg.1320
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229860.peg.1320
Phosphate_metabolism	Pyrophosphate-energized proton pump (EC 3.6.1.1)	fig|6666666.229860.peg.1827
Phosphate_metabolism	Sodium-dependent phosphate transporter	fig|6666666.229860.peg.771
Phosphoenolpyruvate_phosphomutase	2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)	fig|6666666.229860.peg.1156
Phosphoenolpyruvate_phosphomutase	Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)	fig|6666666.229860.peg.1158
Phosphoenolpyruvate_phosphomutase	Phosphonopyruvate decarboxylase (EC 4.1.1.82)	fig|6666666.229860.peg.1157
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229860.peg.312
Phosphoglycerate_mutase_protein_family	Carboxyl-terminal protease (EC 3.4.21.102)	fig|6666666.229860.peg.843
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229860.peg.905
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229860.peg.2628
Phosphoglycerate_mutase_protein_family	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229860.peg.149
Photorespiration_(oxidative_C2_cycle)	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229860.peg.1501
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229860.peg.974
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229860.peg.972
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.13
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.116
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.214
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.467
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1140
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1248
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1581
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1743
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1939
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2242
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2353
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.229860.peg.975
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229860.peg.976
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229860.peg.977
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229860.peg.2524
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229860.peg.2572
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229860.peg.643
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229860.peg.1863
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229860.peg.499
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229860.peg.644
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229860.peg.1864
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229860.peg.1124
Polyadenylation_bacterial	Poly(A) polymerase (EC 2.7.7.19)	fig|6666666.229860.peg.91
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229860.peg.1464
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229860.peg.1472
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229860.peg.2346
Polyamine_Metabolism	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229860.peg.1405
Polyamine_Metabolism	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229860.peg.218
Polyamine_Metabolism	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229860.peg.1405
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229860.peg.2080
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229860.peg.2087
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229860.peg.2264
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229860.peg.1045
Polyprenyl_Diphosphate_Biosynthesis	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229860.peg.803
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229860.peg.352
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229860.peg.408
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229860.peg.804
Potassium_homeostasis	Glutathione-regulated potassium-efflux system ancillary protein KefG	fig|6666666.229860.peg.2106
Potassium_homeostasis	Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase)	fig|6666666.229860.peg.2425
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229860.peg.400
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229860.peg.2146
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229860.peg.2361
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229860.peg.2146
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229860.peg.2361
Potassium_homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.229860.peg.254
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2145
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2159
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2362
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2145
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2159
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229860.peg.2362
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229860.peg.692
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229860.peg.692
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.229860.peg.2465
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229860.peg.1503
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229860.peg.2410
Proteasome_bacterial	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229860.peg.928
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229860.peg.308
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229860.peg.929
Proteasome_bacterial	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229860.peg.1346
Proteasome_bacterial	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229860.peg.1347
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229860.peg.1810
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229860.peg.1486
Proteasome_bacterial	Site-specific tyrosine recombinase	fig|6666666.229860.peg.1348
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229860.peg.597
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229860.peg.1849
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229860.peg.1850
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229860.peg.213
Protein_chaperones	ClpB protein	fig|6666666.229860.peg.368
Protein_chaperones	ClpB protein	fig|6666666.229860.peg.702
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229860.peg.1851
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229860.peg.253
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229860.peg.2435
Protein_degradation	Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)	fig|6666666.229860.peg.552
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229860.peg.553
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229860.peg.928
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229860.peg.554
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229860.peg.308
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229860.peg.929
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229860.peg.1346
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229860.peg.1347
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229860.peg.1810
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229860.peg.1486
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229860.peg.368
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229860.peg.702
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229860.peg.137
Proteolysis_in_bacteria,_ATP-dependent	Nucleotide excision repair protein, with UvrB/UvrC motif	fig|6666666.229860.peg.700
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegS	fig|6666666.229860.peg.394
Purine_Utilization	Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4)	fig|6666666.229860.peg.1755
Purine_Utilization	Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)	fig|6666666.229860.peg.1754
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.229860.peg.1210
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229860.peg.1625
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229860.peg.431
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229860.peg.917
Purine_conversions	Adenosine deaminase (EC 3.5.4.4)	fig|6666666.229860.peg.2260
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229860.peg.1402
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229860.peg.1073
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229860.peg.95
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229860.peg.95
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229860.peg.1037
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229860.peg.2574
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229860.peg.2000
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229860.peg.1485
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229860.peg.616
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229860.peg.95
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229860.peg.95
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229860.peg.2574
Putative_TldE-TldD_proteolytic_complex	TldD family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229860.peg.293
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229860.peg.1254
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229860.peg.1269
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229860.peg.1270
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229860.peg.1253
Putative_TldE-TldD_proteolytic_complex	TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229860.peg.294
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229860.peg.1767
Pyrimidine_utilization	Uracil permease	fig|6666666.229860.peg.437
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229860.peg.489
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229860.peg.1814
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.229860.peg.1416
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229860.peg.1066
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229860.peg.1065
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Malate Na(+) symporter	fig|6666666.229860.peg.2540
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229860.peg.250
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229860.peg.2111
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229860.peg.120
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229860.peg.1071
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229860.peg.1650
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229860.peg.1559
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.229860.peg.1701
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229860.peg.141
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229860.peg.420
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229860.peg.1800
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229860.peg.2410
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.229860.peg.305
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229860.peg.222
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229860.peg.486
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229860.peg.837
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229860.peg.1802
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229860.peg.2258
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229860.peg.1646
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229860.peg.245
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229860.peg.2035
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229860.peg.961
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229860.peg.962
RNA_3'-terminal_phosphate_cyclase	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229860.peg.1693
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229860.peg.839
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)	fig|6666666.229860.peg.815
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229860.peg.1129
RNA_methylation	LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM	fig|6666666.229860.peg.113
RNA_methylation	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229860.peg.767
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229860.peg.608
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229860.peg.844
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229860.peg.1430
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229860.peg.140
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229860.peg.1611
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229860.peg.1387
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229860.peg.2403
RNA_methylation	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229860.peg.2615
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229860.peg.1785
RNA_methylation	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229860.peg.599
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229860.peg.643
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229860.peg.1863
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229860.peg.499
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229860.peg.644
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229860.peg.1864
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229860.peg.506
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229860.peg.140
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229860.peg.1665
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229860.peg.506
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229860.peg.302
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229860.peg.1136
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229860.peg.299
RNA_modification_cluster	Protein YidD	fig|6666666.229860.peg.301
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229860.peg.300
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229860.peg.1707
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229860.peg.272
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229860.peg.273
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229860.peg.1093
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229860.peg.1476
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229860.peg.1620
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229860.peg.1185
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229860.peg.1428
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229860.peg.2654
RNA_pseudouridine_syntheses	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229860.peg.1635
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229860.peg.490
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229860.peg.422
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229860.peg.1410
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcC	fig|6666666.229860.peg.2275
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcD	fig|6666666.229860.peg.2276
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229860.peg.459
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229860.peg.99
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229860.peg.1975
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229860.peg.1084
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229860.peg.420
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229860.peg.1800
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229860.peg.2272
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229860.peg.2158
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229860.peg.2453
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229860.peg.566
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229860.peg.443
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229860.peg.2310
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229860.peg.2594
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229860.peg.2095
Restriction-Modification_System	Putative predicted metal-dependent hydrolase	fig|6666666.229860.peg.2097
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229860.peg.2093
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229860.peg.2493
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229860.peg.2096
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229860.peg.2492
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229860.peg.2094
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229860.peg.2495
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229860.peg.2496
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229860.peg.2498
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229860.peg.1587
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229860.peg.2352
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229860.peg.1132
Rhamnose_containing_glycans	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229860.peg.1154
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229860.peg.21
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229860.peg.1133
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.229860.peg.1763
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229860.peg.1131
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229860.peg.1466
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229860.peg.2379
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229860.peg.1466
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229860.peg.2379
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229860.peg.1085
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229860.peg.1466
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229860.peg.2379
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.989
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.1450
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.1561
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.1676
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.1859
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.2110
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.2126
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229860.peg.2160
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229860.peg.1466
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229860.peg.2379
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229860.peg.1410
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229860.peg.2660
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229860.peg.1035
Ribonucleases_in_Bacillus	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229860.peg.1128
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229860.peg.1035
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229860.peg.860
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229860.peg.1236
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229860.peg.2118
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229860.peg.2124
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.229860.peg.1237
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229860.peg.2624
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229860.peg.1458
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229860.peg.1713
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229860.peg.1612
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229860.peg.1185
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229860.peg.1428
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229860.peg.2654
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229860.peg.1430
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229860.peg.490
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229860.peg.1102
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229860.peg.1611
Ribosome_post-transcriptional_modification_and_chromosomal_segregation_cluster	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229860.peg.1551
Ribosome_post-transcriptional_modification_and_chromosomal_segregation_cluster	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229860.peg.2442
Ribosome_post-transcriptional_modification_and_chromosomal_segregation_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229860.peg.2549
Ribosome_post-transcriptional_modification_and_chromosomal_segregation_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229860.peg.643
Ribosome_post-transcriptional_modification_and_chromosomal_segregation_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229860.peg.1863
Ribosome_post-transcriptional_modification_and_chromosomal_segregation_cluster	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229860.peg.602
Ribosome_post-transcriptional_modification_and_chromosomal_segregation_cluster	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229860.peg.1424
Ribosome_post-transcriptional_modification_and_chromosomal_segregation_cluster	GTP-binding protein EngA	fig|6666666.229860.peg.2367
Ribosome_post-transcriptional_modification_and_chromosomal_segregation_cluster	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229860.peg.1620
Ribosome_post-transcriptional_modification_and_chromosomal_segregation_cluster	Segregation and condensation protein A	fig|6666666.229860.peg.1622
Ribosome_post-transcriptional_modification_and_chromosomal_segregation_cluster	Segregation and condensation protein B	fig|6666666.229860.peg.1621
Ribosome_post-transcriptional_modification_and_chromosomal_segregation_cluster	Site-specific recombinase XerD	fig|6666666.229860.peg.1352
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229860.peg.553
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229860.peg.351
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229860.peg.349
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229860.peg.350
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229860.peg.598
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229860.peg.1696
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229860.peg.1799
Rubrerythrin	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229860.peg.2441
Rubrerythrin	Rubredoxin	fig|6666666.229860.peg.1453
Rubrerythrin	Rubrerythrin	fig|6666666.229860.peg.2039
Rubrerythrin	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229860.peg.20
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.229860.peg.852
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229860.peg.1085
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229860.peg.853
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229860.peg.814
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.229860.peg.216
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229860.peg.236
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229860.peg.237
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.229860.peg.772
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229860.peg.237
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229860.peg.558
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229860.peg.560
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229860.peg.1744
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229860.peg.1746
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229860.peg.2372
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229860.peg.2374
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229860.peg.1508
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.229860.peg.1546
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229860.peg.2433
Serine-glyoxylate_cycle	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229860.peg.2406
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229860.peg.1052
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229860.peg.1053
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.13
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.116
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.214
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.467
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1140
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1248
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1581
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1743
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.1939
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2242
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229860.peg.2353
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229860.peg.2439
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229860.peg.2439
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229860.peg.2572
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229860.peg.978
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229860.peg.760
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229860.peg.760
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229860.peg.2572
Serine_endopeptidase_(EC_3.4.21.-)	Prolyl endopeptidase (EC 3.4.21.26)	fig|6666666.229860.peg.1361
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229860.peg.803
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Hypothetical similar to thiamin biosynthesis lipoprotein ApbE	fig|6666666.229860.peg.2620
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229860.peg.2619
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229860.peg.688
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229860.peg.1288
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229860.peg.1439
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229860.peg.2354
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229860.peg.2483
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229860.peg.2607
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229860.peg.600
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229860.peg.1395
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229860.peg.1846
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.229860.peg.2555
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229860.peg.1394
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229860.peg.1847
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229860.peg.1848
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229860.peg.1394
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229860.peg.1396
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229860.peg.2619
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229860.peg.466
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229860.peg.1105
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229860.peg.1250
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229860.peg.1835
Sporulation-associated_proteins_with_broader_functions	Protein of unknown function identified by role in sporulation (SpoVG)	fig|6666666.229860.peg.1228
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229860.peg.1383
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229860.peg.925
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229860.peg.1106
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.229860.peg.1812
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229860.peg.403
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229860.peg.404
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229860.peg.1109
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229860.peg.1358
Stationary_phase_repair_cluster	FIG139438: lipoprotein B	fig|6666666.229860.peg.1171
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229860.peg.2325
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, periplasmic component	fig|6666666.229860.peg.1482
Taurine_Utilization	Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)	fig|6666666.229860.peg.243
Taurine_Utilization	Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)	fig|6666666.229860.peg.468
Taurine_Utilization	Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)	fig|6666666.229860.peg.1577
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229860.peg.404
Teichoic_and_lipoteichoic_acids_biosynthesis	N-acetylmannosaminyltransferase (EC 2.4.1.187)	fig|6666666.229860.peg.845
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229860.peg.1154
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid translocation permease protein TagG	fig|6666666.229860.peg.1155
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229860.peg.2570
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.731
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.997
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2090
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2143
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2176
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2203
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2215
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2424
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2610
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229860.peg.732
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229860.peg.2165
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229860.peg.2609
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.731
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.997
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2090
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2143
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2176
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2203
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2215
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2424
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229860.peg.2610
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229860.peg.732
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229860.peg.2165
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229860.peg.2609
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229860.peg.1456
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229860.peg.2167
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229860.peg.1456
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229860.peg.2167
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229860.peg.817
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229860.peg.2302
Thiamin_biosynthesis	Thiamin ABC transporter, substrate-binding component	fig|6666666.229860.peg.2304
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229860.peg.1601
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229860.peg.1603
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229860.peg.2303
Thiamin_biosynthesis	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229860.peg.2662
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229860.peg.1748
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229860.peg.1559
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229860.peg.2410
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229860.peg.289
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229860.peg.932
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229860.peg.493
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229860.peg.2564
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229860.peg.298
Threonine_degradation	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.229860.peg.2449
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.229860.peg.462
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229860.peg.914
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229860.peg.1046
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229860.peg.2409
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229860.peg.2541
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229860.peg.966
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229860.peg.1023
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229860.peg.1952
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229860.peg.954
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229860.peg.984
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229860.peg.2033
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229860.peg.2224
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229860.peg.2371
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229860.peg.2225
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229860.peg.758
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229860.peg.2022
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229860.peg.759
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229860.peg.2023
Toxin-antitoxin_replicon_stabilization_systems	VapB protein (antitoxin to VapC)	fig|6666666.229860.peg.551
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229860.peg.550
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229860.peg.1817
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229860.peg.1953
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229860.peg.2655
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229860.peg.1406
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229860.peg.1490
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229860.peg.267
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229860.peg.1764
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229860.peg.2546
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229860.peg.1069
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229860.peg.1407
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229860.peg.945
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229860.peg.1275
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229860.peg.1221
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229860.peg.1556
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229860.peg.2382
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoE	fig|6666666.229860.peg.2358
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.229860.peg.2555
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.229860.peg.295
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229860.peg.1456
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229860.peg.2167
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.229860.peg.1548
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.229860.peg.1526
Translation_elongation_factor_P_lysylation	Translation elongation factor P Lys34:lysine transferase	fig|6666666.229860.peg.416
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229860.peg.1456
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229860.peg.2167
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.229860.peg.1548
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.229860.peg.830
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.229860.peg.1526
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.229860.peg.350
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229860.peg.1731
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229860.peg.957
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229860.peg.1409
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229860.peg.596
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229860.peg.1408
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229860.peg.525
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229860.peg.79
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229860.peg.205
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229860.peg.692
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229860.peg.956
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229860.peg.1835
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229860.peg.206
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229860.peg.351
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229860.peg.1106
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229860.peg.546
Transport_of_Nickel_and_Cobalt	Additional component NikL of nickel ECF transporter	fig|6666666.229860.peg.548
Transport_of_Nickel_and_Cobalt	Additional periplasmic component NikK of nickel ECF transporter	fig|6666666.229860.peg.621
Transport_of_Nickel_and_Cobalt	Predicted cobalt ABC transporter periplasmic component	fig|6666666.229860.peg.623
Transport_of_Nickel_and_Cobalt	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229860.peg.547
Transport_of_Nickel_and_Cobalt	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229860.peg.545
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229860.peg.1243
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229860.peg.2146
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229860.peg.2361
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229860.peg.2350
Trehalose_Uptake_and_Utilization	Trehalase (EC 3.2.1.28)	fig|6666666.229860.peg.1504
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229860.peg.535
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229860.peg.2091
Triacylglycerol_metabolism	Lysophospholipase L2 (EC 3.1.1.5)	fig|6666666.229860.peg.2104
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229860.peg.535
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229860.peg.2091
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229860.peg.765
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229860.peg.1078
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229860.peg.1007
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229860.peg.1080
Two-component_regulatory_systems_in_Campylobacter	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229860.peg.1081
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.229860.peg.2440
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229860.peg.2093
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229860.peg.2493
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229860.peg.2096
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229860.peg.2492
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229860.peg.2094
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229860.peg.2495
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229860.peg.2496
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229860.peg.2498
Type_VI_secretion_systems	ClpB protein	fig|6666666.229860.peg.368
Type_VI_secretion_systems	ClpB protein	fig|6666666.229860.peg.702
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229860.peg.1631
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229860.peg.2356
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229860.peg.1837
USS-DB-7	ClpB protein	fig|6666666.229860.peg.368
USS-DB-7	ClpB protein	fig|6666666.229860.peg.702
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229860.peg.2153
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229860.peg.2367
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229860.peg.2656
Universal_GTPases	GTP-binding protein Era	fig|6666666.229860.peg.828
Universal_GTPases	GTP-binding protein HflX	fig|6666666.229860.peg.2488
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229860.peg.25
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229860.peg.611
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229860.peg.506
Universal_GTPases	Probable GTPase related to EngC	fig|6666666.229860.peg.2511
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229860.peg.1123
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229860.peg.695
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229860.peg.594
Universal_GTPases	Translation elongation factor G	fig|6666666.229860.peg.1456
Universal_GTPases	Translation elongation factor G	fig|6666666.229860.peg.2167
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229860.peg.830
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229860.peg.1731
Universal_GTPases	Translation initiation factor 2	fig|6666666.229860.peg.1408
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229860.peg.1767
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229860.peg.2119
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229860.peg.983
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 4	fig|6666666.229860.peg.158
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229860.peg.2517
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229860.peg.707
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229860.peg.1528
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229860.peg.2508
Yfa_cluster	Competence/damage-inducible protein CinA	fig|6666666.229860.peg.108
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229860.peg.1102
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229860.peg.148
YjeE	NAD(P)HX dehydratase	fig|6666666.229860.peg.1200
YjeE	NAD(P)HX epimerase	fig|6666666.229860.peg.1200
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229860.peg.1102
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229860.peg.1101
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229860.peg.603
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229860.peg.766
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229860.peg.2641
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229860.peg.308
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229860.peg.929
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229860.peg.917
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229860.peg.754
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229860.peg.1560
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229860.peg.2049
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229860.peg.2061
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229860.peg.2245
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229860.peg.2293
cAMP_signaling_in_bacteria	Prophage Clp protease-like protein	fig|6666666.229860.peg.670
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.229860.peg.1086
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229860.peg.1354
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229860.peg.1355
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229860.peg.1356
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229860.peg.1353
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229860.peg.311
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229860.peg.1426
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229860.peg.1354
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229860.peg.1355
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229860.peg.1353
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229860.peg.761
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229860.peg.1132
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229860.peg.1131
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.238
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.1796
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.2348
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229860.peg.629
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229860.peg.506
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229860.peg.1665
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229860.peg.71
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229860.peg.1349
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229860.peg.200
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229860.peg.642
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229860.peg.924
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229860.peg.1791
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229860.peg.1625
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229860.peg.431
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.229860.peg.2549
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229860.peg.798
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229860.peg.602
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229860.peg.1424
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229860.peg.2000
pyrimidine_conversions	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229860.peg.494
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229860.peg.1748
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229860.peg.2635
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.229860.peg.406
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229860.peg.1466
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229860.peg.2379
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229860.peg.1466
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229860.peg.2379
tRNA-dependent_amino_acid_transfers	tRNA-dependent lipid II--amino acid ligase	fig|6666666.229860.peg.74
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229860.peg.943
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229860.peg.1523
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229860.peg.1519
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229860.peg.1010
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.229860.peg.1890
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.229860.peg.1891
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.229860.peg.1889
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229860.peg.2357
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229860.peg.2246
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.229860.peg.1890
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.229860.peg.1891
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.229860.peg.1889
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.229860.peg.2246
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229860.peg.2432
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229860.peg.1130
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229860.peg.2575
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229860.peg.357
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229860.peg.2679
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229860.peg.1447
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229860.peg.2337
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229860.peg.802
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.229860.peg.465
tRNA_aminoacylation,_Pro	tRNA proofreading protein STM4549	fig|6666666.229860.peg.328
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229860.peg.388
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229860.peg.1421
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229860.peg.1008
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229860.peg.1634
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229860.peg.1206
tRNA_modification_Bacteria	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229860.peg.2616
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.238
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.1796
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229860.peg.2348
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229860.peg.629
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229860.peg.798
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229860.peg.1039
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.229860.peg.1220
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.229860.peg.1807
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229860.peg.506
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.229860.peg.1813
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.229860.peg.1812
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.229860.peg.1811
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229860.peg.245
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229860.peg.236
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229860.peg.237
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229860.peg.1611
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229860.peg.1387
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229860.peg.2403
tRNA_modification_Bacteria	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229860.peg.2615
tRNA_modification_Bacteria	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229860.peg.2662
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229860.peg.2324
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229860.peg.2507
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229860.peg.1125
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229860.peg.2396
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229860.peg.422
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229860.peg.1410
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229860.peg.1665
tRNA_modification_Bacteria	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229860.peg.2008
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229860.peg.1226
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229860.peg.2035
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229860.peg.1021
tRNA_modification_Bacteria	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229860.peg.599
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229860.peg.1472
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229860.peg.300
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.229860.peg.780
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229860.peg.1125
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229860.peg.2396
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229860.peg.422
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229860.peg.1410
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229860.peg.1226
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229860.peg.1021
tRNA_splicing	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229860.peg.1693
tRNAs	tRNA-Ala-CGC	fig|6666666.229860.rna.32
tRNAs	tRNA-Ala-GGC	fig|6666666.229860.rna.44
tRNAs	tRNA-Arg-GCG	fig|6666666.229860.rna.38
tRNAs	tRNA-Cys-GCA	fig|6666666.229860.rna.41
tRNAs	tRNA-Gly-GCC	fig|6666666.229860.rna.17
tRNAs	tRNA-Leu-CAA	fig|6666666.229860.rna.46
tRNAs	tRNA-Leu-CAG	fig|6666666.229860.rna.31
tRNAs	tRNA-Leu-GAG	fig|6666666.229860.rna.3
tRNAs	tRNA-Phe-GAA	fig|6666666.229860.rna.4
tRNAs	tRNA-Pro-CGG	fig|6666666.229860.rna.48
tRNAs	tRNA-Pro-GGG	fig|6666666.229860.rna.2
tRNAs	tRNA-Ser-GGA	fig|6666666.229860.rna.40
tRNAs	tRNA-Trp-CCA	fig|6666666.229860.rna.7
tRNAs	tRNA-Val-GAC	fig|6666666.229860.rna.1
