16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229861.peg.1786
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229861.peg.1670
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.229861.peg.1668
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229861.peg.1821
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229861.peg.1669
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229861.peg.667
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229861.peg.390
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229861.peg.1506
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229861.peg.524
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229861.peg.2077
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229861.peg.493
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229861.peg.519
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229861.peg.808
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229861.peg.487
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229861.peg.1095
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229861.peg.1096
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229861.peg.339
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)	fig|6666666.229861.peg.1450
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)	fig|6666666.229861.peg.1448
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1)	fig|6666666.229861.peg.1449
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.229861.peg.1823
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)	fig|6666666.229861.peg.59
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)	fig|6666666.229861.peg.61
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)	fig|6666666.229861.peg.62
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)	fig|6666666.229861.peg.63
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)	fig|6666666.229861.peg.572
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)	fig|6666666.229861.peg.64
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229861.peg.307
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229861.peg.902
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)	fig|6666666.229861.peg.1587
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229861.peg.305
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229861.peg.900
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229861.peg.306
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229861.peg.1500
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229861.peg.1743
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229861.peg.304
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229861.peg.446
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229861.peg.1580
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229861.peg.1581
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229861.peg.1742
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229861.peg.2361
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229861.peg.1179
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229861.peg.1741
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229861.peg.903
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229861.peg.1178
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229861.peg.1503
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229861.peg.1576
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229861.peg.1740
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229861.peg.1181
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229861.peg.1499
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229861.peg.1502
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229861.peg.1577
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229861.peg.1579
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229861.peg.1584
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229861.peg.1744
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229861.peg.1180
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229861.peg.1578
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229861.peg.1807
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229861.peg.180
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229861.peg.179
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229861.peg.421
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229861.peg.569
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229861.peg.958
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229861.peg.569
Adhesion_of_Campylobacter	Fibronectin/fibrinogen-binding protein	fig|6666666.229861.peg.2023
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.229861.peg.1718
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.229861.peg.1719
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.229861.peg.827
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.229861.peg.1716
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.229861.peg.1606
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.152
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.567
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.1226
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229861.peg.2365
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.229861.peg.320
Allantoin_Utilization	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229861.peg.1513
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.170
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.226
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.562
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.723
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.874
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1023
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1277
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1787
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1897
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2209
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2223
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2224
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2514
Aminoglycoside_adenylyltransferases	Aminoglycoside N6'-acetyltransferase (EC 2.3.1.82)	fig|6666666.229861.peg.2467
Aminopeptidases_(EC_3.4.11.-)	Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.24)	fig|6666666.229861.peg.35
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229861.peg.809
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229861.peg.1949
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229861.peg.159
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229861.peg.1148
Ammonia_assimilation	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229861.peg.913
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.229861.peg.830
Anaerobic_respiratory_reductases	Flavodoxin reductases (ferredoxin-NADPH reductases) family 1	fig|6666666.229861.peg.2173
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229861.peg.1994
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229861.peg.1994
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229861.peg.1451
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229861.peg.1451
Arginine_Deiminase_Pathway	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229861.peg.949
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229861.peg.167
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229861.peg.1451
Arginine_and_Ornithine_Degradation	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229861.peg.1621
Arginine_and_Ornithine_Degradation	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229861.peg.949
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229861.peg.167
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229861.peg.1510
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229861.peg.1451
Arginine_and_Ornithine_Degradation	Ornithine cyclodeaminase (EC 4.3.1.12)	fig|6666666.229861.peg.444
Arginine_and_Ornithine_Degradation	Ornithine cyclodeaminase (EC 4.3.1.12)	fig|6666666.229861.peg.1883
Arginine_and_Ornithine_Degradation	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229861.peg.1621
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229861.peg.771
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229861.peg.1629
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229861.peg.1930
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229861.peg.1674
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229861.peg.965
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229861.peg.1798
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229861.peg.1786
Bacterial_Cell_Division	Cell division protein FtsJ	fig|6666666.229861.peg.2282
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229861.peg.288
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229861.peg.640
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229861.peg.1670
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229861.peg.1673
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229861.peg.1672
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229861.peg.1980
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229861.peg.2564
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229861.peg.1675
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.229861.peg.1668
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229861.peg.2119
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229861.peg.1152
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229861.peg.1094
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229861.peg.1818
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229861.peg.1819
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229861.peg.1820
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.229861.peg.46
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229861.peg.2354
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229861.peg.1669
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229861.peg.1930
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229861.peg.1674
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229861.peg.1786
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229861.peg.288
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229861.peg.640
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229861.peg.1670
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229861.peg.1673
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229861.peg.1672
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229861.peg.1675
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.229861.peg.1668
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229861.peg.1152
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229861.peg.1151
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229861.peg.2489
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229861.peg.1818
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229861.peg.1819
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229861.peg.1820
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229861.peg.1822
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.229861.peg.46
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229861.peg.288
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229861.peg.640
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229861.peg.1909
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229861.peg.2095
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229861.peg.1553
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.552
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.806
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.824
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229861.peg.1937
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229861.peg.192
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.229861.peg.1493
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229861.peg.1821
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.229861.peg.1818
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.229861.peg.1819
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.229861.peg.1820
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.229861.peg.1822
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.229861.peg.46
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.229861.peg.1104
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.229861.peg.1104
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229861.peg.1382
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229861.peg.461
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229861.peg.1103
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229861.peg.260
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229861.peg.423
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229861.peg.424
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229861.peg.597
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229861.peg.2387
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229861.peg.2354
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229861.peg.2401
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229861.peg.137
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.229861.peg.2406
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily I	fig|6666666.229861.peg.1998
Bile_hydrolysis	Choloylglycine hydrolase (EC 3.5.1.24)	fig|6666666.229861.peg.1000
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.229861.peg.356
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229861.peg.425
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229861.peg.1784
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229861.peg.2098
Biotin_biosynthesis	Biotin operon repressor	fig|6666666.229861.peg.515
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229861.peg.515
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229861.peg.1462
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229861.peg.2189
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229861.peg.2099
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229861.peg.2097
Biotin_biosynthesis	predicted biotin regulatory protein BioR (GntR family)	fig|6666666.229861.peg.602
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229861.peg.1492
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229861.peg.308
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229861.peg.309
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229861.peg.402
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229861.peg.1547
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229861.peg.1946
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229861.peg.1616
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229861.peg.1617
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229861.peg.1615
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229861.peg.2195
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229861.peg.2383
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229861.peg.2199
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229861.peg.2197
CBSS-176299.4.peg.1996A	Endoribonuclease L-PSP	fig|6666666.229861.peg.2381
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229861.peg.1321
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229861.peg.1477
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229861.peg.1229
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229861.peg.1228
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229861.peg.1227
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229861.peg.141
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229861.peg.935
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229861.peg.180
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229861.peg.179
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229861.peg.1792
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229861.peg.1794
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229861.peg.1525
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229861.peg.1145
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229861.peg.1454
CBSS-258594.1.peg.3339	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.229861.peg.1953
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229861.peg.1082
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229861.peg.1839
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229861.peg.1082
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229861.peg.1839
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229861.peg.1679
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229861.peg.1678
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229861.peg.548
CBSS-292415.3.peg.2341	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229861.peg.97
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229861.peg.1904
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229861.peg.2200
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229861.peg.1906
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229861.peg.2182
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229861.peg.45
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229861.peg.44
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229861.peg.2397
CBSS-314276.3.peg.1499	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229861.peg.295
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229861.peg.1393
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.229861.peg.1391
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.229861.peg.1392
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.229861.peg.2074
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229861.peg.750
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229861.peg.1273
CBSS-316057.3.peg.1308	RNA polymerase sigma-54 factor RpoN	fig|6666666.229861.peg.98
CBSS-316273.3.peg.227	Alpha-2-macroglobulin	fig|6666666.229861.peg.2446
CBSS-316273.3.peg.227	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229861.peg.2450
CBSS-316407.3.peg.2816	Protein of unknown function DUF541	fig|6666666.229861.peg.2027
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229861.peg.569
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229861.peg.569
CBSS-323098.3.peg.2823	Flagellar motor rotation protein MotB	fig|6666666.229861.peg.455
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229861.peg.2587
CBSS-326442.4.peg.1852	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229861.peg.950
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229861.peg.1707
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229861.peg.1705
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229861.peg.97
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229861.peg.2456
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229861.peg.250
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229861.peg.484
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229861.peg.2540
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229861.peg.1814
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229861.peg.543
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229861.peg.1456
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229861.peg.1815
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229861.peg.1819
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229861.peg.1820
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.229861.peg.46
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229861.peg.1767
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229861.peg.1782
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229861.peg.292
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229861.peg.33
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229861.peg.550
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229861.peg.1995
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229861.peg.734
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.152
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.567
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.1226
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229861.peg.2260
CBSS-393130.3.peg.794	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229861.peg.248
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229861.peg.275
CBSS-469378.4.peg.430	FIG002344: Hydrolase (HAD superfamily)	fig|6666666.229861.peg.748
CBSS-469378.4.peg.430	RecA protein	fig|6666666.229861.peg.1390
CBSS-521098.4.peg.1460	FIG001614: Membrane protein	fig|6666666.229861.peg.644
CBSS-521098.4.peg.1460	FIG015373: Membrane protein	fig|6666666.229861.peg.645
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229861.peg.828
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229861.peg.829
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229861.peg.1711
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.229861.peg.1709
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229861.peg.1710
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229861.peg.1708
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229861.peg.1708
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229861.peg.13
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229861.peg.40
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229861.peg.1732
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229861.peg.1786
CBSS-83331.1.peg.3039	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229861.peg.39
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229861.peg.1821
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229861.peg.42
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.152
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.567
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.1226
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229861.peg.1175
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229861.peg.1494
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229861.peg.2075
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229861.peg.1949
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229861.peg.2094
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229861.peg.2095
CMP-N-acetylneuraminate_Biosynthesis	N-acetylneuraminate synthase (EC 2.5.1.56)	fig|6666666.229861.peg.1480
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229861.peg.836
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229861.peg.837
CRISPRs	CRISPR-associated protein, Csn1 family	fig|6666666.229861.peg.835
CRISPRs	CRISPR-associated protein, Csn2 family	fig|6666666.229861.peg.838
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229861.peg.363
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229861.peg.91
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229861.peg.1901
Cadmium_resistance	Cadmium efflux system accessory protein	fig|6666666.229861.peg.1847
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229861.peg.849
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229861.peg.1955
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229861.peg.2162
Calvin-Benson_cycle	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229861.peg.2091
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229861.peg.860
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229861.peg.273
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.229861.peg.1781
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229861.peg.1705
Carbon_Starvation	Carbon starvation protein A	fig|6666666.229861.peg.486
Carbon_Starvation	Carbon storage regulator	fig|6666666.229861.peg.53
Carbon_storage_regulator	Carbon storage regulator	fig|6666666.229861.peg.53
Carbon_storage_regulator	Flagellar assembly factor FliW	fig|6666666.229861.peg.52
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229861.peg.474
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229861.peg.1152
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229861.peg.1151
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229861.peg.2489
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229861.peg.807
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229861.peg.475
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229861.peg.742
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229861.peg.741
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229861.peg.2482
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229861.peg.91
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229861.peg.1901
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229861.peg.94
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229861.peg.92
Cell_Division_Subsystem_including_YidCD	RNA-binding protein Jag	fig|6666666.229861.peg.90
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229861.peg.93
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229861.peg.200
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229861.peg.1348
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229861.peg.1930
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229861.peg.965
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229861.peg.1798
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229861.peg.2002
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229861.peg.1185
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229861.peg.2393
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229861.peg.1525
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229861.peg.1763
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229861.peg.1810
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily S (as in PMID19099556)	fig|6666666.229861.peg.2193
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229861.peg.498
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229861.peg.1692
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229861.peg.844
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.229861.peg.761
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Sarcosine oxidase alpha subunit (EC 1.5.3.1)	fig|6666666.229861.peg.318
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Sarcosine oxidase alpha subunit (EC 1.5.3.1)	fig|6666666.229861.peg.604
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229861.peg.249
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229861.peg.2089
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229861.peg.2090
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229861.peg.568
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229861.peg.2134
Chorismate_Synthesis	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229861.peg.1969
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229861.peg.1643
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229861.peg.2089
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229861.peg.2090
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229861.peg.137
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase alpha chain (EC 4.1.3.6)	fig|6666666.229861.peg.2081
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.229861.peg.2082
Citrate_Metabolism,_Transport,_and_Regulation	[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	fig|6666666.229861.peg.1988
ClpAS_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229861.peg.2435
ClpAS_cluster	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229861.peg.2434
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229861.peg.2107
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229861.peg.2000
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229861.peg.2089
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229861.peg.2090
CoA_disulfide_thiol-disulfide_redox_system	CoA-disulfide reductase (EC 1.8.1.14)	fig|6666666.229861.peg.620
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.229861.peg.79
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.229861.peg.86
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229861.peg.81
Cobalamin_synthesis	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	fig|6666666.229861.peg.725
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229861.peg.1156
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229861.peg.1665
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229861.peg.2259
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.229861.peg.330
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.229861.peg.1161
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.229861.peg.1155
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.229861.peg.2038
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.229861.peg.1162
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.229861.peg.238
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.229861.peg.25
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.229861.peg.331
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.229861.peg.360
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.229861.peg.1396
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.229861.peg.329
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229861.peg.1176
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229861.peg.2565
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229861.peg.547
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229861.peg.2056
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.229861.peg.862
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229861.peg.2088
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229861.peg.1839
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229861.peg.104
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229861.peg.2117
Colicin_V_and_Bacteriocin_Production_Cluster	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229861.peg.1135
Colicin_V_and_Bacteriocin_Production_Cluster	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229861.peg.101
Colicin_V_and_Bacteriocin_Production_Cluster	Colicin V production protein	fig|6666666.229861.peg.2286
Colicin_V_and_Bacteriocin_Production_Cluster	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229861.peg.1594
Colicin_V_and_Bacteriocin_Production_Cluster	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229861.peg.1594
Colicin_V_and_Bacteriocin_Production_Cluster	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229861.peg.2557
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229861.peg.249
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229861.peg.2089
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229861.peg.2090
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229861.peg.568
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229861.peg.2134
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229861.peg.1643
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229861.peg.2089
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229861.peg.2090
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229861.peg.137
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229861.peg.1679
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229861.peg.181
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229861.peg.2094
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229861.peg.2095
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229861.peg.2004
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229861.peg.2386
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229861.peg.273
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229861.peg.1678
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Serine/threonine protein kinase PrkC, regulator of stationary phase	fig|6666666.229861.peg.2093
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.552
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.806
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.824
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229861.peg.1937
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229861.peg.192
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229861.peg.557
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229861.peg.221
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229861.peg.481
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229861.peg.968
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229861.peg.1849
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229861.peg.481
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229861.peg.968
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229861.peg.1849
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.229861.peg.2538
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229861.peg.828
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229861.peg.829
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229861.peg.1711
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229861.peg.625
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229861.peg.625
D-Galacturonate_and_D-Glucuronate_Utilization	Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	fig|6666666.229861.peg.865
D-Galacturonate_and_D-Glucuronate_Utilization	Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	fig|6666666.229861.peg.866
D-Galacturonate_and_D-Glucuronate_Utilization	Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	fig|6666666.229861.peg.867
D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization	Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	fig|6666666.229861.peg.2055
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229861.peg.1513
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	D-glycerate transporter (predicted)	fig|6666666.229861.peg.722
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.170
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.226
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.562
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.723
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.874
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1023
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1277
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1787
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1897
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2209
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2223
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2224
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2514
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229861.peg.1513
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	D-glycerate transporter (predicted)	fig|6666666.229861.peg.722
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.170
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.226
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.562
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.723
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.874
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1023
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1277
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1787
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1897
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2209
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2223
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2224
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2514
D-ribose_utilization	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229861.peg.2091
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229861.peg.860
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229861.peg.573
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229861.peg.1995
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229861.peg.2087
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229861.peg.221
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229861.peg.2492
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229861.peg.807
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229861.peg.475
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229861.peg.264
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.229861.peg.2005
DNA_processing_cluster	Protein involved in catabolism of external DNA	fig|6666666.229861.peg.804
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229861.peg.2006
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229861.peg.1523
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229861.peg.1834
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229861.peg.169
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229861.peg.1483
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229861.peg.205
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229861.peg.1493
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229861.peg.1775
DNA_repair,_bacterial	DNA-cytosine methyltransferase (EC 2.1.1.37)	fig|6666666.229861.peg.974
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229861.peg.204
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229861.peg.811
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229861.peg.1006
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229861.peg.1207
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229861.peg.2085
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.229861.peg.2183
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229861.peg.1530
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229861.peg.2378
DNA_repair,_bacterial	Exonuclease SbcC	fig|6666666.229861.peg.380
DNA_repair,_bacterial	Exonuclease SbcC	fig|6666666.229861.peg.638
DNA_repair,_bacterial	Exonuclease SbcD	fig|6666666.229861.peg.637
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229861.peg.2065
DNA_repair,_bacterial	Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	fig|6666666.229861.peg.720
DNA_repair,_bacterial	Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	fig|6666666.229861.peg.1737
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229861.peg.734
DNA_repair,_bacterial	RecA protein	fig|6666666.229861.peg.1390
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.229861.peg.703
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229861.peg.1231
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229861.peg.2125
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229861.peg.2303
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229861.peg.2304
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229861.peg.2379
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229861.peg.279
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.229861.peg.1915
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229861.peg.834
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.229861.peg.931
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229861.peg.741
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229861.peg.933
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.229861.peg.1390
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229861.peg.2006
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229861.peg.1231
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229861.peg.2125
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229861.peg.2492
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.229861.peg.1390
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.229861.peg.703
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase Rep	fig|6666666.229861.peg.1420
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229861.peg.33
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229861.peg.550
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229861.peg.279
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.229861.peg.1390
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229861.peg.2004
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229861.peg.474
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229861.peg.807
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229861.peg.475
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229861.peg.742
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229861.peg.741
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.229861.peg.1963
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.229861.peg.2156
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229861.peg.1679
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229861.peg.807
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229861.peg.475
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229861.peg.2427
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229861.peg.2540
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229861.peg.1966
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229861.peg.101
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.229861.peg.1095
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.229861.peg.1734
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.229861.peg.1234
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.229861.peg.1233
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229861.peg.1095
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.229861.peg.1733
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.229861.peg.1869
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.229861.peg.1752
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229861.peg.1096
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229861.peg.421
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.229861.peg.598
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.229861.peg.598
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.229861.peg.2416
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.229861.peg.1497
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.229861.peg.1497
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229861.peg.1514
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229861.peg.2419
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229861.peg.2546
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229861.peg.946
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229861.peg.958
Deoxyribose_and_Deoxynucleoside_Catabolism	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229861.peg.2493
Dihydroxyacetone_kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), ADP-binding subunit	fig|6666666.229861.peg.57
Dihydroxyacetone_kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), dihydroxyacetone binding subunit	fig|6666666.229861.peg.58
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229861.peg.2522
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229861.peg.425
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229861.peg.1784
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229861.peg.2098
ECF_class_transporters	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229861.peg.2443
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.298
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.760
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.764
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.774
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.796
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.1416
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.1423
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.2041
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.2045
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.2465
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229861.peg.300
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229861.peg.753
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229861.peg.754
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229861.peg.758
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229861.peg.762
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229861.peg.776
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229861.peg.798
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229861.peg.1414
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229861.peg.1424
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229861.peg.2039
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229861.peg.2047
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229861.peg.2466
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229861.peg.2099
ECF_class_transporters	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229861.peg.2442
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.299
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.759
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.763
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.775
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.797
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.1415
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.1422
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.2040
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.2046
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229861.peg.2464
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229861.peg.2097
ECF_class_transporters	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229861.peg.2444
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229861.peg.625
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229861.peg.625
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229861.peg.1469
Entner-Doudoroff_Pathway	Hexokinase (EC 2.7.1.1)	fig|6666666.229861.peg.161
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229861.peg.1955
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229861.peg.2162
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229861.peg.281
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229861.peg.2144
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229861.peg.222
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229861.peg.1454
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229861.peg.516
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229861.peg.1343
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229861.peg.1145
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.229861.peg.1134
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229861.peg.1135
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.229861.peg.1539
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229861.peg.1137
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229861.peg.1136
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.229861.peg.1102
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.229861.peg.1146
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229861.peg.1454
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229861.peg.859
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229861.peg.516
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229861.peg.1454
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229861.peg.524
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.229861.peg.1512
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229861.peg.859
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229861.peg.516
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229861.peg.1961
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229861.peg.2284
Flagellar_motility	Flagellar basal-body rod modification protein FlgD	fig|6666666.229861.peg.459
Flagellar_motility	Flagellar biosynthesis protein FlhA	fig|6666666.229861.peg.528
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229861.peg.527
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229861.peg.2582
Flagellar_motility	Flagellar biosynthesis protein FlhF	fig|6666666.229861.peg.359
Flagellar_motility	Flagellar biosynthesis protein FliR	fig|6666666.229861.peg.526
Flagellar_motility	Flagellar motor rotation protein MotA	fig|6666666.229861.peg.456
Flagellar_motility	Flagellar motor rotation protein MotB	fig|6666666.229861.peg.455
Flagellar_motility	Flagellar motor switch protein FliM	fig|6666666.229861.peg.453
Flagellar_motility	Flagellar motor switch protein FliN	fig|6666666.229861.peg.452
Flagellar_motility	Flagellar synthesis regulator FleN	fig|6666666.229861.peg.358
Flagellar_motility	Flagellum-specific ATP synthase FliI	fig|6666666.229861.peg.1689
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.229861.peg.98
Flagellar_motility	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229861.peg.1958
Flagellum	Flagellar M-ring protein FliF	fig|6666666.229861.peg.1686
Flagellum	Flagellar assembly protein FliH	fig|6666666.229861.peg.1688
Flagellum	Flagellar basal-body rod modification protein FlgD	fig|6666666.229861.peg.459
Flagellum	Flagellar basal-body rod protein FlgB	fig|6666666.229861.peg.1683
Flagellum	Flagellar basal-body rod protein FlgC	fig|6666666.229861.peg.1684
Flagellum	Flagellar basal-body rod protein FlgF	fig|6666666.229861.peg.1518
Flagellum	Flagellar basal-body rod protein FlgG	fig|6666666.229861.peg.1519
Flagellum	Flagellar biosynthesis protein FlhA	fig|6666666.229861.peg.528
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229861.peg.527
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229861.peg.2582
Flagellum	Flagellar biosynthesis protein FlhF	fig|6666666.229861.peg.359
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229861.peg.20
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229861.peg.454
Flagellum	Flagellar biosynthesis protein FliP	fig|6666666.229861.peg.450
Flagellum	Flagellar biosynthesis protein FliQ	fig|6666666.229861.peg.525
Flagellum	Flagellar biosynthesis protein FliR	fig|6666666.229861.peg.526
Flagellum	Flagellar biosynthesis protein FliS	fig|6666666.229861.peg.588
Flagellum	Flagellar biosynthesis protein FliZ	fig|6666666.229861.peg.451
Flagellum	Flagellar hook protein FlgE	fig|6666666.229861.peg.458
Flagellum	Flagellar hook-associated protein FlgK	fig|6666666.229861.peg.50
Flagellum	Flagellar hook-associated protein FlgL	fig|6666666.229861.peg.51
Flagellum	Flagellar hook-associated protein FliD	fig|6666666.229861.peg.1941
Flagellum	Flagellar hook-basal body complex protein FliE	fig|6666666.229861.peg.1685
Flagellum	Flagellar hook-length control protein FliK	fig|6666666.229861.peg.460
Flagellum	Flagellar motor rotation protein MotA	fig|6666666.229861.peg.456
Flagellum	Flagellar motor rotation protein MotB	fig|6666666.229861.peg.455
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229861.peg.1687
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229861.peg.1761
Flagellum	Flagellar motor switch protein FliM	fig|6666666.229861.peg.453
Flagellum	Flagellar motor switch protein FliN	fig|6666666.229861.peg.452
Flagellum	Flagellar protein FlbB	fig|6666666.229861.peg.1803
Flagellum	Flagellar protein FlbD	fig|6666666.229861.peg.457
Flagellum	Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)	fig|6666666.229861.peg.1520
Flagellum	Flagellar protein FliJ	fig|6666666.229861.peg.1690
Flagellum	Flagellar synthesis regulator FleN	fig|6666666.229861.peg.358
Flagellum	Flagellin protein FlaA	fig|6666666.229861.peg.1516
Flagellum	Flagellin protein FlaA	fig|6666666.229861.peg.1943
Flagellum	Flagellin protein FlaA	fig|6666666.229861.peg.1944
Flagellum	Flagellin protein FlaG	fig|6666666.229861.peg.1942
Flagellum	Flagellum-specific ATP synthase FliI	fig|6666666.229861.peg.1689
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229861.peg.543
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229861.peg.1456
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229861.peg.1815
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.229861.peg.98
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229861.peg.1786
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgB	fig|6666666.229861.peg.1683
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgC	fig|6666666.229861.peg.1684
Flagellum_in_Campylobacter	Flagellar hook-basal body complex protein FliE	fig|6666666.229861.peg.1685
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229861.peg.1516
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229861.peg.1943
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229861.peg.1944
Flavodoxin	Flavodoxin	fig|6666666.229861.peg.630
Flavodoxin	Flavodoxin	fig|6666666.229861.peg.780
Flavodoxin	Flavodoxin	fig|6666666.229861.peg.868
Flavodoxin	Flavodoxin	fig|6666666.229861.peg.870
Flavodoxin	Flavodoxin	fig|6666666.229861.peg.1647
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229861.peg.1506
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229861.peg.1594
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229861.peg.1594
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229861.peg.942
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.229861.peg.822
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229861.peg.965
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229861.peg.1798
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229861.peg.2002
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229861.peg.1810
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229861.peg.2037
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229861.peg.2473
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229861.peg.1918
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229861.peg.549
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229861.peg.1117
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229861.peg.2472
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229861.peg.2471
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229861.peg.2165
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229861.peg.2165
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229861.peg.1918
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229861.peg.1083
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229861.peg.2179
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.229861.peg.966
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229861.peg.1510
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229861.peg.1510
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229861.peg.104
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229861.peg.2117
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229861.peg.2308
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229861.peg.1913
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229861.peg.159
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229861.peg.1148
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229861.peg.913
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229861.peg.1510
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229861.peg.1510
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229861.peg.97
Glutathione:_Redox_cycle	Glutathione peroxidase (EC 1.11.1.9)	fig|6666666.229861.peg.2178
Glycerate_metabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229861.peg.1513
Glycerate_metabolism	D-glycerate transporter (predicted)	fig|6666666.229861.peg.722
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.170
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.226
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.562
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.723
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.874
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1023
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1277
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1787
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1897
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2209
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2223
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2224
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2514
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229861.peg.222
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229861.peg.1110
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.229861.peg.2388
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.229861.peg.2389
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229861.peg.317
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229861.peg.603
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229861.peg.2402
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229861.peg.1321
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229861.peg.1477
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	NADH peroxidase (EC 1.11.1.1)	fig|6666666.229861.peg.560
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Probable glycerol transport protein	fig|6666666.229861.peg.1320
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229861.peg.1539
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229861.peg.524
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229861.peg.199
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229861.peg.252
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229861.peg.340
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229861.peg.1831
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.170
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.226
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.562
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.723
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.874
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1023
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1277
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1787
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1897
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2209
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2223
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2224
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2514
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229861.peg.1110
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229861.peg.317
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229861.peg.603
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229861.peg.2402
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229861.peg.41
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229861.peg.2496
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229861.peg.95
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229861.peg.339
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229861.peg.2496
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229861.peg.2075
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229861.peg.2071
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.170
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.226
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.562
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.723
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.874
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1023
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1277
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1787
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1897
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2209
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2223
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2224
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2514
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.229861.peg.2074
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229861.peg.2073
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229861.peg.2072
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229861.peg.1973
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229861.peg.1974
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229861.peg.2288
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229861.peg.339
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229861.peg.2587
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229861.peg.2075
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229861.peg.2077
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.229861.peg.2074
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229861.peg.2073
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229861.peg.2072
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B alpha subunit (EC 1.21.4.2)	fig|6666666.229861.peg.2431
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B beta subunit (EC 1.21.4.2)	fig|6666666.229861.peg.2431
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229861.peg.2428
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229861.peg.2429
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229861.peg.2430
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 1	fig|6666666.229861.peg.752
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 2	fig|6666666.229861.peg.751
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229861.peg.1274
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229861.peg.1275
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229861.peg.1276
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229861.peg.750
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229861.peg.1273
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229861.peg.1272
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229861.peg.84
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229861.peg.2346
Glycogen_metabolism	Glycogen branching enzyme, GH-57-type, archaeal (EC 2.4.1.18)	fig|6666666.229861.peg.1604
Glycogen_metabolism	Glycogen branching enzyme, GH-57-type, archaeal (EC 2.4.1.18)	fig|6666666.229861.peg.1605
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229861.peg.565
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229861.peg.105
Glycogen_metabolism	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229861.peg.2026
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229861.peg.390
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229861.peg.1469
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229861.peg.849
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229861.peg.253
Glycolysis_and_Gluconeogenesis	Hexokinase (EC 2.7.1.1)	fig|6666666.229861.peg.161
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229861.peg.1955
Glycolysis_and_Gluconeogenesis	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229861.peg.857
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229861.peg.2162
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229861.peg.281
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229861.peg.2144
Glycolysis_and_Gluconeogenesis	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit (EC 2.7.1.90)	fig|6666666.229861.peg.537
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.229861.peg.2007
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229861.peg.222
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229861.peg.1362
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229861.peg.1968
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229861.peg.1705
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229861.peg.933
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229861.peg.1094
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229861.peg.494
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229861.peg.828
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229861.peg.829
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229861.peg.1711
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229861.peg.1710
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229861.peg.1708
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229861.peg.1171
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229861.peg.2398
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229861.peg.1170
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229861.peg.1645
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229861.peg.1455
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229861.peg.1169
HPr_catabolite_repression_system	Catabolite repression HPr-like protein Crh	fig|6666666.229861.peg.1768
HPr_catabolite_repression_system	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229861.peg.1769
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229861.peg.1171
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229861.peg.2398
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229861.peg.1170
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229861.peg.1169
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.229861.peg.1935
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.229861.peg.1646
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229861.peg.2554
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229861.peg.1077
Heat_shock_dnaK_gene_cluster_extended	Signal peptidase-like protein	fig|6666666.229861.peg.582
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229861.peg.1092
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229861.peg.667
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229861.peg.1086
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229861.peg.1933
Hfl_operon	GTP-binding protein HflX	fig|6666666.229861.peg.440
Hfl_operon	HflC protein	fig|6666666.229861.peg.1802
Hfl_operon	HflK protein	fig|6666666.229861.peg.1801
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229861.peg.808
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.229861.peg.1133
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.229861.peg.520
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.229861.peg.284
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229861.peg.1554
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229861.peg.2554
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229861.peg.553
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229861.peg.823
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.552
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.806
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.824
Hypothetical_protein_HNE_2485	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229861.peg.236
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229861.peg.153
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229861.peg.1274
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229861.peg.1276
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229861.peg.2428
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229861.peg.2430
Integrons	Integron integrase IntIPac	fig|6666666.229861.peg.7
Integrons	Integron integrase IntIPac	fig|6666666.229861.peg.8
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229861.peg.471
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229861.peg.1679
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229861.peg.1708
Inteins	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229861.peg.857
Inteins	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229861.peg.1326
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229861.peg.1800
Inteins	Translation initiation factor 2	fig|6666666.229861.peg.1617
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, ATP-binding subunit	fig|6666666.229861.peg.1982
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, permease protein 2	fig|6666666.229861.peg.1981
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, substrate binding protein	fig|6666666.229861.peg.1979
Iron_transport_system_including_ABC_transporter	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229861.peg.1977
Iron_transport_system_including_ABC_transporter	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229861.peg.1978
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229861.peg.1994
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229861.peg.40
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229861.peg.1105
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229861.peg.1732
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229861.peg.2573
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229861.peg.2572
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229861.peg.1807
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229861.peg.1607
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229861.peg.1994
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229861.peg.42
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229861.peg.1994
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229861.peg.1994
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229861.peg.1994
Isoprenoinds_for_Quinones	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229861.peg.1118
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229861.peg.42
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229861.peg.1399
KH_domain_RNA_binding_protein_YlqC	KH domain RNA binding protein YlqC	fig|6666666.229861.peg.1398
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229861.peg.1397
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.229861.peg.982
LOS_core_oligosaccharide_biosynthesis	Beta-1,3-glucosyltransferase	fig|6666666.229861.peg.1886
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229861.peg.116
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229861.peg.118
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229861.peg.117
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229861.peg.115
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229861.peg.120
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229861.peg.119
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229861.peg.1258
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229861.peg.1904
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229861.peg.2200
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229861.peg.1824
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229861.peg.1918
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229861.peg.1083
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229861.peg.2179
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229861.peg.951
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229861.peg.2508
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229861.peg.2579
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229861.peg.2512
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	fig|6666666.229861.peg.2511
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229861.peg.1904
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229861.peg.2200
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229861.peg.1083
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229861.peg.2179
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229861.peg.2077
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-)	fig|6666666.229861.peg.1263
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229861.peg.2018
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229861.peg.321
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229861.peg.2008
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229861.peg.2155
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229861.peg.2580
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229861.peg.292
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229861.peg.504
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229861.peg.1863
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229861.peg.2351
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229861.peg.2352
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229861.peg.2350
LysR-family_proteins_in_Escherichia_coli	Chromosome initiation inhibitor	fig|6666666.229861.peg.906
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229861.peg.613
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229861.peg.731
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229861.peg.1197
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.229861.peg.542
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229861.peg.1814
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229861.peg.543
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229861.peg.1456
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229861.peg.1815
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229861.peg.164
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229861.peg.192
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229861.peg.828
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229861.peg.829
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229861.peg.1711
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229861.peg.1546
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229861.peg.1381
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.229861.peg.392
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229861.peg.84
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229861.peg.1824
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229861.peg.105
Maltose_and_Maltodextrin_Utilization	Oligo-1,6-glucosidase (EC 3.2.1.10)	fig|6666666.229861.peg.576
Mannitol_Utilization	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229861.peg.1769
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229861.peg.549
MazEF_toxin-antitoxing_(programmed_cell_death)_system	Programmed cell death antitoxin YdcD	fig|6666666.229861.peg.243
MazEF_toxin-antitoxing_(programmed_cell_death)_system	Programmed cell death toxin YdcE	fig|6666666.229861.peg.244
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229861.peg.1175
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229861.peg.1494
Methanogenesis_strays	Ni2+-binding GTPase involved in regulation of expression and maturation of hydrogenase	fig|6666666.229861.peg.978
Methanogenesis_strays	Uncharacterized ABC transporter ATP-binding protein MJ0121	fig|6666666.229861.peg.977
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229861.peg.1238
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.229861.peg.2500
Methionine_Degradation	Methionine transporter MetT	fig|6666666.229861.peg.2502
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229861.peg.1209
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229861.peg.2498
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229861.peg.569
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229861.peg.162
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229861.peg.569
Methionine_Salvage	5-methylthioribose kinase (EC 2.7.1.100)	fig|6666666.229861.peg.1236
Methionine_Salvage	Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)	fig|6666666.229861.peg.2115
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229861.peg.199
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229861.peg.199
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229861.peg.97
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229861.peg.287
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229861.peg.2019
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229861.peg.1086
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32)	fig|6666666.229861.peg.1986
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32)	fig|6666666.229861.peg.1987
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.805
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.840
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.858
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.1158
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.1335
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.1336
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.1567
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.2051
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229861.peg.166
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229861.peg.383
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229861.peg.1175
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229861.peg.1494
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229861.peg.2456
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229861.peg.990
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229861.peg.2161
Murein_Hydrolases	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	fig|6666666.229861.peg.2561
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229861.peg.114
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229861.peg.113
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229861.peg.91
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229861.peg.1901
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Protein YidD	fig|6666666.229861.peg.92
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	RNA-binding protein Jag	fig|6666666.229861.peg.90
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.229861.peg.2461
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.229861.peg.2462
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.229861.peg.2463
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229861.peg.1559
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229861.peg.1560
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229861.peg.799
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229861.peg.1561
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229861.peg.1289
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229861.peg.498
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229861.peg.1692
N-linked_Glycosylation_in_Bacteria	Phospholipid-lipopolysaccharide ABC transporter	fig|6666666.229861.peg.124
N-linked_Glycosylation_in_Bacteria	Phospholipid-lipopolysaccharide ABC transporter	fig|6666666.229861.peg.518
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229861.peg.1904
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229861.peg.2200
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229861.peg.484
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.229861.peg.1864
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229861.peg.2034
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.229861.peg.1864
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229861.peg.641
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.229861.peg.2194
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229861.peg.1093
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.229861.peg.1854
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229861.peg.1855
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229861.peg.1356
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229861.peg.1355
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229861.peg.1354
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229861.peg.1353
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229861.peg.1352
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Sodium-dependent phosphate transporter	fig|6666666.229861.peg.2278
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229861.peg.2472
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229861.peg.2471
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.229861.peg.980
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.229861.peg.981
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229861.peg.40
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229861.peg.1105
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229861.peg.1732
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229861.peg.2573
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229861.peg.2572
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229861.peg.1807
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229861.peg.1607
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229861.peg.2567
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229861.peg.484
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229861.peg.1554
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229861.peg.1619
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229861.peg.1616
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229861.peg.1618
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229861.peg.1617
Omega_peptidases_(EC_3.4.19.-)	Acylamino-acid-releasing enzyme (EC 3.4.19.1)	fig|6666666.229861.peg.564
Omega_peptidases_(EC_3.4.19.-)	Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	fig|6666666.229861.peg.643
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229861.peg.1506
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229861.peg.493
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229861.peg.519
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229861.peg.487
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229861.peg.487
Oxidative_stress	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229861.peg.485
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.229861.peg.1106
Oxidative_stress	Rubrerythrin	fig|6666666.229861.peg.930
Oxidative_stress	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229861.peg.2201
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.229861.peg.293
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229861.peg.2091
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229861.peg.860
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229861.peg.421
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229861.peg.273
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.229861.peg.1781
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229861.peg.1255
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229861.peg.1255
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229861.peg.1786
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229861.peg.82
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229861.peg.1175
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229861.peg.1494
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229861.peg.1913
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229861.peg.2188
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229861.peg.1821
Peptidoglycan_Biosynthesis	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229861.peg.2450
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.229861.peg.2544
Peptidoglycan_Biosynthesis	Rare lipoprotein A precursor	fig|6666666.229861.peg.2342
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.229861.peg.1822
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229861.peg.558
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229861.peg.1183
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229861.peg.2287
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229861.peg.1595
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229861.peg.882
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229861.peg.1671
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229861.peg.82
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229861.peg.1595
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229861.peg.882
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--L-ornithine ligase	fig|6666666.229861.peg.1345
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229861.peg.1671
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.229861.peg.851
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229861.peg.2568
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229861.peg.1117
Periplasmic_Stress_Response	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229861.peg.39
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229861.peg.278
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegS	fig|6666666.229861.peg.2581
Persister_Cells	HipA protein	fig|6666666.229861.peg.994
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229861.peg.471
Phage_replication	DNA transposition protein	fig|6666666.229861.peg.690
Phage_tail_proteins	Phage tail length tape-measure protein	fig|6666666.229861.peg.714
Phage_tail_proteins_2	Phage tail length tape-measure protein	fig|6666666.229861.peg.714
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229861.peg.29
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229861.peg.2084
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229861.peg.2217
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229861.peg.2542
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229861.peg.2541
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death antitoxin YdcD	fig|6666666.229861.peg.243
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death toxin MazF like	fig|6666666.229861.peg.219
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death toxin YdcE	fig|6666666.229861.peg.244
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229861.peg.1969
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.229861.peg.1515
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229861.peg.1661
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229861.peg.1662
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.229861.peg.1660
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229861.peg.1708
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229861.peg.1708
Phosphate_metabolism	Pyrophosphate-energized proton pump (EC 3.6.1.1)	fig|6666666.229861.peg.1193
Phosphate_metabolism	Sodium-dependent phosphate transporter	fig|6666666.229861.peg.2278
Phosphoenolpyruvate_phosphomutase	2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)	fig|6666666.229861.peg.1879
Phosphoenolpyruvate_phosphomutase	Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)	fig|6666666.229861.peg.1877
Phosphoenolpyruvate_phosphomutase	Phosphonopyruvate decarboxylase (EC 4.1.1.82)	fig|6666666.229861.peg.1878
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229861.peg.81
Phosphoglycerate_mutase_protein_family	Carboxyl-terminal protease (EC 3.4.21.102)	fig|6666666.229861.peg.1078
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229861.peg.281
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229861.peg.2144
Phosphoglycerate_mutase_protein_family	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229861.peg.191
Photorespiration_(oxidative_C2_cycle)	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229861.peg.1513
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229861.peg.2075
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229861.peg.2077
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.170
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.226
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.562
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.723
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.874
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1023
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1277
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1787
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1897
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2209
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2223
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2224
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2514
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.229861.peg.2074
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229861.peg.2073
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229861.peg.2072
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229861.peg.390
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229861.peg.339
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229861.peg.1152
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229861.peg.1151
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229861.peg.2489
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229861.peg.1913
Polyadenylation_bacterial	Poly(A) polymerase (EC 2.7.7.19)	fig|6666666.229861.peg.2169
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229861.peg.1553
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229861.peg.1545
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229861.peg.569
Polyamine_Metabolism	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229861.peg.1621
Polyamine_Metabolism	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229861.peg.167
Polyamine_Metabolism	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229861.peg.1621
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229861.peg.649
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229861.peg.1924
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229861.peg.1994
Polyprenyl_Diphosphate_Biosynthesis	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229861.peg.1118
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229861.peg.42
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229861.peg.2568
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229861.peg.1117
Potassium_homeostasis	Glutathione-regulated potassium-efflux system ancillary protein KefG	fig|6666666.229861.peg.863
Potassium_homeostasis	Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase)	fig|6666666.229861.peg.501
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229861.peg.2576
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229861.peg.553
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229861.peg.823
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229861.peg.553
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229861.peg.823
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.552
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.806
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.824
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.552
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.806
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229861.peg.824
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229861.peg.2357
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229861.peg.2357
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.229861.peg.462
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229861.peg.1510
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229861.peg.516
Proteasome_bacterial	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229861.peg.2121
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229861.peg.85
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229861.peg.2120
Proteasome_bacterial	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229861.peg.1682
Proteasome_bacterial	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229861.peg.1681
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229861.peg.1213
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229861.peg.1529
Proteasome_bacterial	Site-specific tyrosine recombinase	fig|6666666.229861.peg.1680
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229861.peg.1171
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229861.peg.2398
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229861.peg.1170
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229861.peg.171
Protein_chaperones	ClpB protein	fig|6666666.229861.peg.26
Protein_chaperones	ClpB protein	fig|6666666.229861.peg.2347
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229861.peg.1169
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229861.peg.133
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229861.peg.491
Protein_degradation	Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)	fig|6666666.229861.peg.2436
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229861.peg.2435
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229861.peg.2121
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229861.peg.2434
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229861.peg.85
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229861.peg.2120
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229861.peg.1682
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229861.peg.1681
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229861.peg.1213
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229861.peg.1529
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229861.peg.26
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229861.peg.2347
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229861.peg.205
Proteolysis_in_bacteria,_ATP-dependent	Nucleotide excision repair protein, with UvrB/UvrC motif	fig|6666666.229861.peg.2349
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegS	fig|6666666.229861.peg.2581
Purine_Utilization	Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4)	fig|6666666.229861.peg.1265
Purine_Utilization	Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)	fig|6666666.229861.peg.1266
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.229861.peg.1826
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229861.peg.1388
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229861.peg.2549
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229861.peg.2132
Purine_conversions	Adenosine deaminase (EC 3.5.4.4)	fig|6666666.229861.peg.653
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229861.peg.1624
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229861.peg.1966
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229861.peg.2165
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229861.peg.2165
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229861.peg.2002
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229861.peg.337
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229861.peg.958
Purine_conversions	dNTP triphosphohydrolase, putative	fig|6666666.229861.peg.1871
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229861.peg.1530
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229861.peg.2378
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229861.peg.2165
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229861.peg.2165
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229861.peg.337
Putative_TldE-TldD_proteolytic_complex	TldD family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229861.peg.100
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229861.peg.1767
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229861.peg.1782
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229861.peg.1766
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229861.peg.1783
Putative_TldE-TldD_proteolytic_complex	TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229861.peg.99
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229861.peg.1255
Pyrimidine_utilization	Uracil permease	fig|6666666.229861.peg.2546
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229861.peg.1209
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229861.peg.2498
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.229861.peg.1606
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229861.peg.1973
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229861.peg.1974
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Malate Na(+) symporter	fig|6666666.229861.peg.372
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Malate Na(+) symporter	fig|6666666.229861.peg.373
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229861.peg.136
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229861.peg.857
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229861.peg.222
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229861.peg.1362
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229861.peg.1968
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229861.peg.1454
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.229861.peg.1319
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229861.peg.199
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229861.peg.1222
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229861.peg.2559
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229861.peg.516
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.229861.peg.88
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229861.peg.163
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229861.peg.655
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229861.peg.1084
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229861.peg.1220
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229861.peg.2501
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229861.peg.1366
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229861.peg.141
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229861.peg.935
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229861.peg.2089
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229861.peg.2090
RNA_3'-terminal_phosphate_cyclase	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229861.peg.1326
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229861.peg.1082
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)	fig|6666666.229861.peg.1107
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229861.peg.1908
RNA_methylation	LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM	fig|6666666.229861.peg.228
RNA_methylation	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229861.peg.2282
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229861.peg.2386
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229861.peg.1077
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229861.peg.1591
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229861.peg.200
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229861.peg.1400
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229861.peg.1641
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229861.peg.523
RNA_methylation	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229861.peg.296
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229861.peg.1237
RNA_methylation	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229861.peg.2396
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229861.peg.1152
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229861.peg.1151
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229861.peg.2489
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229861.peg.2482
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229861.peg.200
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229861.peg.1348
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229861.peg.2482
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229861.peg.91
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229861.peg.1901
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229861.peg.94
RNA_modification_cluster	Protein YidD	fig|6666666.229861.peg.92
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229861.peg.93
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229861.peg.1313
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229861.peg.114
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229861.peg.113
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229861.peg.1946
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229861.peg.1540
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229861.peg.1393
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229861.peg.1851
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229861.peg.256
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229861.peg.1593
RNA_pseudouridine_syntheses	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229861.peg.1377
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229861.peg.2497
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229861.peg.2557
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229861.peg.1615
Rad50-Mre11_DNA_repair_cluster	Bipolar DNA helicase HerA	fig|6666666.229861.peg.1441
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcC	fig|6666666.229861.peg.380
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcC	fig|6666666.229861.peg.638
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcD	fig|6666666.229861.peg.637
Rad50-Mre11_DNA_repair_cluster	FIG036446: hypothetical protein	fig|6666666.229861.peg.1440
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229861.peg.2522
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229861.peg.990
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229861.peg.2161
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229861.peg.1955
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229861.peg.1222
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229861.peg.2559
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229861.peg.641
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229861.peg.807
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229861.peg.475
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229861.peg.2427
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229861.peg.2540
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229861.peg.317
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229861.peg.603
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229861.peg.657
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229861.peg.1141
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229861.peg.435
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229861.peg.1438
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229861.peg.436
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229861.peg.432
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229861.peg.2593
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229861.peg.2594
Restriction-Modification_System	Type III restriction-modification system DNA endonuclease res (EC 3.1.21.5)	fig|6666666.229861.peg.1750
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229861.peg.563
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229861.peg.1749
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229861.peg.1905
Rhamnose_containing_glycans	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229861.peg.1881
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229861.peg.1904
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229861.peg.2200
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.229861.peg.1259
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229861.peg.1906
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229861.peg.1551
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229861.peg.1551
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229861.peg.1954
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229861.peg.1551
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.805
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.840
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.858
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.1158
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.1335
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.1336
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.1567
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229861.peg.2051
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229861.peg.1551
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229861.peg.1615
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229861.peg.250
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229861.peg.2004
Ribonucleases_in_Bacillus	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229861.peg.1909
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229861.peg.2004
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229861.peg.400
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229861.peg.1800
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229861.peg.850
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229861.peg.842
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.229861.peg.1799
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229861.peg.287
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229861.peg.1559
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229861.peg.1307
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.229861.peg.116
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.229861.peg.118
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.229861.peg.1369
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.229861.peg.1301
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.229861.peg.1309
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.229861.peg.1298
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.229861.peg.1314
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.229861.peg.1306
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.229861.peg.1401
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229861.peg.117
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.229861.peg.2461
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.229861.peg.2199
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.229861.peg.1296
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.229861.peg.1293
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.229861.peg.1302
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.229861.peg.1809
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.229861.peg.2197
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.229861.peg.1505
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.229861.peg.1299
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.229861.peg.1294
Ribosome_LSU_bacterial	LSU ribosomal protein L30p (L7e)	fig|6666666.229861.peg.1308
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.229861.peg.1971
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-dependent	fig|6666666.229861.peg.1971
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.229861.peg.1538
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.229861.peg.121
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-dependent	fig|6666666.229861.peg.121
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.229861.peg.94
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.229861.peg.2462
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.229861.peg.1291
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.229861.peg.1292
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.229861.peg.1303
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.229861.peg.1305
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229861.peg.115
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.229861.peg.2123
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229861.peg.1399
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229861.peg.1851
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229861.peg.256
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229861.peg.1593
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229861.peg.1591
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229861.peg.2497
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229861.peg.1937
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229861.peg.1400
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229861.peg.2435
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229861.peg.43
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229861.peg.45
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229861.peg.44
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229861.peg.2397
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229861.peg.1223
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229861.peg.1323
Rubrerythrin	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229861.peg.485
Rubrerythrin	Rubredoxin	fig|6666666.229861.peg.1564
Rubrerythrin	Rubrerythrin	fig|6666666.229861.peg.930
Rubrerythrin	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229861.peg.2201
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.229861.peg.408
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229861.peg.1954
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229861.peg.407
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229861.peg.1108
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.229861.peg.168
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229861.peg.153
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229861.peg.154
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.229861.peg.2277
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229861.peg.153
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229861.peg.1274
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229861.peg.1276
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229861.peg.2428
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229861.peg.2430
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229861.peg.1506
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.229861.peg.1469
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229861.peg.493
Serine-glyoxylate_cycle	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229861.peg.519
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229861.peg.1986
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229861.peg.1987
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.170
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.226
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.562
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.723
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.874
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1023
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1277
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1787
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.1897
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2209
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2223
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2224
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229861.peg.2514
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229861.peg.487
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229861.peg.487
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229861.peg.339
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229861.peg.2071
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229861.peg.2288
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229861.peg.2288
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229861.peg.339
Serine_endopeptidase_(EC_3.4.21.-)	Prolyl endopeptidase (EC 3.4.21.26)	fig|6666666.229861.peg.1667
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229861.peg.1118
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Hypothetical similar to thiamin biosynthesis lipoprotein ApbE	fig|6666666.229861.peg.291
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229861.peg.292
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229861.peg.304
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229861.peg.446
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229861.peg.1580
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229861.peg.1581
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229861.peg.1742
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229861.peg.2361
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229861.peg.1174
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229861.peg.1633
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229861.peg.2395
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.229861.peg.356
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229861.peg.1172
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229861.peg.1173
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229861.peg.1634
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229861.peg.1632
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229861.peg.1634
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229861.peg.292
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229861.peg.1785
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229861.peg.1934
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229861.peg.2515
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229861.peg.1185
Sporulation-associated_proteins_with_broader_functions	Protein of unknown function identified by role in sporulation (SpoVG)	fig|6666666.229861.peg.1808
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229861.peg.1645
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229861.peg.2124
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229861.peg.1933
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.229861.peg.1211
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229861.peg.2573
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229861.peg.2572
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229861.peg.1930
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229861.peg.1670
Stationary_phase_repair_cluster	FIG139438: lipoprotein B	fig|6666666.229861.peg.1865
Sucrose_utilization	Predicted sucrose permease, MFS family, FucP subfamily	fig|6666666.229861.peg.220
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229861.peg.590
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, periplasmic component	fig|6666666.229861.peg.1533
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229861.peg.2572
Teichoic_and_lipoteichoic_acids_biosynthesis	CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12)	fig|6666666.229861.peg.1882
Teichoic_and_lipoteichoic_acids_biosynthesis	N-acetylmannosaminyltransferase (EC 2.4.1.187)	fig|6666666.229861.peg.1076
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229861.peg.1881
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid translocation permease protein TagG	fig|6666666.229861.peg.1880
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229861.peg.341
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.301
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.502
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.745
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.766
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.787
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.2042
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.2327
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229861.peg.302
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229861.peg.2326
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.301
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.502
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.745
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.766
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.787
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.2042
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229861.peg.2327
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229861.peg.302
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229861.peg.2326
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229861.peg.799
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229861.peg.1561
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229861.peg.799
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229861.peg.1561
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229861.peg.1105
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229861.peg.612
Thiamin_biosynthesis	Thiamin ABC transporter, substrate-binding component	fig|6666666.229861.peg.610
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229861.peg.611
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229861.peg.1407
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229861.peg.1409
Thiamin_biosynthesis	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229861.peg.248
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229861.peg.1272
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229861.peg.1454
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229861.peg.516
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229861.peg.104
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229861.peg.2117
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229861.peg.347
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229861.peg.2494
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229861.peg.95
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.229861.peg.2519
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229861.peg.517
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229861.peg.1993
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229861.peg.2135
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229861.peg.371
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229861.peg.204
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229861.peg.811
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229861.peg.1006
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229861.peg.1207
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229861.peg.2085
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229861.peg.938
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229861.peg.2096
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229861.peg.2292
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229861.peg.419
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229861.peg.2291
Toxin-antitoxin_replicon_stabilization_systems	TTE0858 replicon stabilization protein (antitoxin to TTE0859)	fig|6666666.229861.peg.418
Toxin-antitoxin_replicon_stabilization_systems	VapB protein (antitoxin to VapC)	fig|6666666.229861.peg.2437
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229861.peg.1205
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229861.peg.2438
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229861.peg.812
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229861.peg.1005
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229861.peg.255
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229861.peg.1619
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229861.peg.1525
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229861.peg.119
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229861.peg.1258
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229861.peg.367
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229861.peg.1970
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229861.peg.1618
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229861.peg.2105
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229861.peg.1763
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229861.peg.543
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229861.peg.1456
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229861.peg.1815
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoE	fig|6666666.229861.peg.556
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.229861.peg.356
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.229861.peg.98
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229861.peg.799
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229861.peg.1561
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.229861.peg.1466
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.229861.peg.1488
Translation_elongation_factor_P_lysylation	Translation elongation factor P Lys34:lysine transferase	fig|6666666.229861.peg.2563
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229861.peg.799
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229861.peg.1561
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.229861.peg.1466
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.229861.peg.1092
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.229861.peg.1488
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.229861.peg.44
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229861.peg.1289
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229861.peg.2094
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229861.peg.1616
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229861.peg.2399
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229861.peg.1617
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229861.peg.2463
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229861.peg.2182
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229861.peg.180
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229861.peg.2357
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229861.peg.2095
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229861.peg.1185
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229861.peg.179
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229861.peg.43
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229861.peg.1933
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229861.peg.2443
Transport_of_Nickel_and_Cobalt	Additional component NikL of nickel ECF transporter	fig|6666666.229861.peg.2441
Transport_of_Nickel_and_Cobalt	Additional periplasmic component NikK of nickel ECF transporter	fig|6666666.229861.peg.2373
Transport_of_Nickel_and_Cobalt	Predicted cobalt ABC transporter periplasmic component	fig|6666666.229861.peg.2371
Transport_of_Nickel_and_Cobalt	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229861.peg.2442
Transport_of_Nickel_and_Cobalt	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229861.peg.2444
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229861.peg.1792
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229861.peg.1794
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229861.peg.553
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229861.peg.823
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229861.peg.565
Trehalose_Uptake_and_Utilization	Trehalase (EC 3.2.1.28)	fig|6666666.229861.peg.1509
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229861.peg.885
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229861.peg.2453
Triacylglycerol_metabolism	Lysophospholipase L2 (EC 3.1.1.5)	fig|6666666.229861.peg.876
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229861.peg.885
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229861.peg.2453
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229861.peg.1961
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229861.peg.2284
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229861.peg.1959
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229861.peg.2032
Two-component_regulatory_systems_in_Campylobacter	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229861.peg.1958
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.229861.peg.486
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229861.peg.435
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229861.peg.1438
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229861.peg.436
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229861.peg.432
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229861.peg.2593
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229861.peg.2594
Type_VI_secretion_systems	ClpB protein	fig|6666666.229861.peg.26
Type_VI_secretion_systems	ClpB protein	fig|6666666.229861.peg.2347
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229861.peg.1382
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229861.peg.558
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229861.peg.1183
USS-DB-7	ClpB protein	fig|6666666.229861.peg.26
USS-DB-7	ClpB protein	fig|6666666.229861.peg.2347
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229861.peg.814
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229861.peg.548
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229861.peg.254
Universal_GTPases	GTP-binding protein Era	fig|6666666.229861.peg.1094
Universal_GTPases	GTP-binding protein HflX	fig|6666666.229861.peg.440
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229861.peg.2195
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229861.peg.2383
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229861.peg.2482
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229861.peg.1914
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229861.peg.2354
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229861.peg.2401
Universal_GTPases	Translation elongation factor G	fig|6666666.229861.peg.799
Universal_GTPases	Translation elongation factor G	fig|6666666.229861.peg.1561
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229861.peg.1092
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229861.peg.1289
Universal_GTPases	Translation initiation factor 2	fig|6666666.229861.peg.1617
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229861.peg.1255
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229861.peg.849
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229861.peg.2065
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 4	fig|6666666.229861.peg.182
Xylose_utilization	Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	fig|6666666.229861.peg.865
Xylose_utilization	Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	fig|6666666.229861.peg.866
Xylose_utilization	Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	fig|6666666.229861.peg.867
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229861.peg.420
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229861.peg.427
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229861.peg.1486
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229861.peg.2341
Yfa_cluster	Competence/damage-inducible protein CinA	fig|6666666.229861.peg.2153
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229861.peg.1937
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229861.peg.192
YjeE	NAD(P)HX dehydratase	fig|6666666.229861.peg.1835
YjeE	NAD(P)HX epimerase	fig|6666666.229861.peg.1835
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229861.peg.1937
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229861.peg.1938
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229861.peg.269
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229861.peg.2283
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229861.peg.2392
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229861.peg.85
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229861.peg.2120
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229861.peg.2132
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229861.peg.621
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229861.peg.672
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229861.peg.907
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229861.peg.917
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229861.peg.1453
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229861.peg.2299
cAMP_signaling_in_bacteria	Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase	fig|6666666.229861.peg.1395
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.229861.peg.1953
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229861.peg.1674
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229861.peg.1673
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229861.peg.1672
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229861.peg.1675
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229861.peg.82
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229861.peg.1595
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229861.peg.1674
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229861.peg.1673
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229861.peg.1675
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229861.peg.2287
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, putative	fig|6666666.229861.peg.1871
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229861.peg.1905
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229861.peg.1906
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.152
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.567
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.1226
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229861.peg.2365
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229861.peg.2482
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229861.peg.1348
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229861.peg.1462
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229861.peg.2189
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229861.peg.1679
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229861.peg.1231
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229861.peg.2125
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229861.peg.1388
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229861.peg.2549
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.229861.peg.363
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229861.peg.1123
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229861.peg.1597
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229861.peg.2393
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229861.peg.958
pyrimidine_conversions	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229861.peg.2493
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229861.peg.1272
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229861.peg.275
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.229861.peg.2570
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229861.peg.1551
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229861.peg.1551
tRNA-dependent_amino_acid_transfers	tRNA-dependent lipid II--amino acid ligase	fig|6666666.229861.peg.2186
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229861.peg.2107
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229861.peg.1491
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229861.peg.1495
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229861.peg.2030
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.229861.peg.1072
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.229861.peg.1071
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.229861.peg.1073
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229861.peg.557
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229861.peg.671
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.229861.peg.1072
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.229861.peg.1071
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.229861.peg.1073
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.229861.peg.671
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229861.peg.494
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229861.peg.1907
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229861.peg.336
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229861.peg.37
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229861.peg.236
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229861.peg.1574
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229861.peg.578
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229861.peg.1119
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.229861.peg.2516
tRNA_aminoacylation,_Pro	tRNA proofreading protein STM4549	fig|6666666.229861.peg.66
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229861.peg.2587
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229861.peg.1600
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229861.peg.2031
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229861.peg.1378
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229861.peg.1829
tRNA_modification_Bacteria	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229861.peg.295
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.152
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.567
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229861.peg.1226
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229861.peg.2365
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229861.peg.1123
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229861.peg.2000
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.229861.peg.1216
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.229861.peg.1816
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229861.peg.2482
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.229861.peg.1210
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.229861.peg.1211
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.229861.peg.1212
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229861.peg.141
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229861.peg.153
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229861.peg.154
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229861.peg.1400
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229861.peg.1641
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229861.peg.523
tRNA_modification_Bacteria	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229861.peg.296
tRNA_modification_Bacteria	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229861.peg.248
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229861.peg.428
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229861.peg.591
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229861.peg.530
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229861.peg.1912
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229861.peg.2557
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229861.peg.1615
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229861.peg.1348
tRNA_modification_Bacteria	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229861.peg.950
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229861.peg.1810
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229861.peg.935
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229861.peg.2019
tRNA_modification_Bacteria	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229861.peg.2396
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229861.peg.1545
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229861.peg.93
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.229861.peg.2269
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229861.peg.530
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229861.peg.1912
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229861.peg.2557
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229861.peg.1615
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229861.peg.1810
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229861.peg.2019
tRNA_splicing	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229861.peg.1326
tRNAs	tRNA-Ala-CGC	fig|6666666.229861.rna.24
tRNAs	tRNA-Ala-GGC	fig|6666666.229861.rna.9
tRNAs	tRNA-Arg-GCG	fig|6666666.229861.rna.15
tRNAs	tRNA-Cys-GCA	fig|6666666.229861.rna.12
tRNAs	tRNA-Gly-GCC	fig|6666666.229861.rna.38
tRNAs	tRNA-Leu-CAA	fig|6666666.229861.rna.7
tRNAs	tRNA-Leu-CAG	fig|6666666.229861.rna.25
tRNAs	tRNA-Leu-GAG	fig|6666666.229861.rna.40
tRNAs	tRNA-Phe-GAA	fig|6666666.229861.rna.39
tRNAs	tRNA-Pro-CGG	fig|6666666.229861.rna.5
tRNAs	tRNA-Pro-GGG	fig|6666666.229861.rna.41
tRNAs	tRNA-Ser-GGA	fig|6666666.229861.rna.13
tRNAs	tRNA-Trp-CCA	fig|6666666.229861.rna.2
tRNAs	tRNA-Val-GAC	fig|6666666.229861.rna.42
