16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229863.peg.615
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229863.peg.726
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.229863.peg.728
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229863.peg.578
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229863.peg.727
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229863.peg.1649
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229863.peg.1913
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229863.peg.887
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229863.peg.1771
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229863.peg.1794
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229863.peg.311
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229863.peg.1827
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229863.peg.1799
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229863.peg.1557
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229863.peg.1833
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229863.peg.116
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229863.peg.115
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229863.peg.1959
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)	fig|6666666.229863.peg.946
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)	fig|6666666.229863.peg.948
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1)	fig|6666666.229863.peg.947
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.229863.peg.574
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)	fig|6666666.229863.peg.2253
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)	fig|6666666.229863.peg.2251
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)	fig|6666666.229863.peg.2250
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)	fig|6666666.229863.peg.2249
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)	fig|6666666.229863.peg.2248
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229863.peg.1459
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229863.peg.1991
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)	fig|6666666.229863.peg.807
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229863.peg.1461
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229863.peg.1993
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229863.peg.653
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229863.peg.894
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229863.peg.654
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229863.peg.812
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229863.peg.813
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229863.peg.1876
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229863.peg.1994
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229863.peg.2559
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229863.peg.655
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229863.peg.816
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229863.peg.892
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229863.peg.1235
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229863.peg.656
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229863.peg.817
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229863.peg.891
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229863.peg.1060
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229863.peg.1236
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229863.peg.1458
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229863.peg.652
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229863.peg.810
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229863.peg.814
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229863.peg.895
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229863.peg.1233
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229863.peg.815
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229863.peg.1234
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229863.peg.1992
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229863.peg.592
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229863.peg.2124
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229863.peg.2125
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229863.peg.1906
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229863.peg.1740
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229863.peg.1404
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229863.peg.1740
Adhesion_of_Campylobacter	Fibronectin/fibrinogen-binding protein	fig|6666666.229863.peg.359
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.229863.peg.676
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.229863.peg.675
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.229863.peg.1535
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.229863.peg.678
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.229863.peg.788
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.1193
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.1742
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.2154
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229863.peg.2556
Alkanesulfonate_assimilation	ABC-type nitrate/sulfonate/bicarbonate transport system, permease component	fig|6666666.229863.peg.1639
Alkanesulfonate_assimilation	ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components	fig|6666666.229863.peg.1638
Allantoin_Utilization	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229863.peg.881
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.177
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.318
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.504
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.614
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.901
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1117
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1345
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1499
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1642
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1747
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2079
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2134
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2388
Aminoglycoside_adenylyltransferases	Aminoglycoside N6'-acetyltransferase (EC 2.3.1.82)	fig|6666666.229863.peg.2444
Aminopeptidases_(EC_3.4.11.-)	Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.24)	fig|6666666.229863.peg.2276
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229863.peg.1554
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229863.peg.456
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229863.peg.1268
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229863.peg.2146
Ammonia_assimilation	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229863.peg.1450
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.229863.peg.1532
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229863.peg.399
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229863.peg.399
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229863.peg.399
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229863.peg.945
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229863.peg.945
Arginine_Deiminase_Pathway	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229863.peg.1416
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229863.peg.2137
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229863.peg.945
Arginine_and_Ornithine_Degradation	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229863.peg.773
Arginine_and_Ornithine_Degradation	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229863.peg.1416
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229863.peg.2137
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229863.peg.883
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229863.peg.945
Arginine_and_Ornithine_Degradation	Ornithine cyclodeaminase (EC 4.3.1.12)	fig|6666666.229863.peg.1877
Arginine_and_Ornithine_Degradation	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229863.peg.773
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229863.peg.764
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229863.peg.1598
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229863.peg.1599
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229863.peg.475
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229863.peg.722
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229863.peg.601
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229863.peg.1397
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229863.peg.615
Bacterial_Cell_Division	Cell division protein FtsJ	fig|6666666.229863.peg.50
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229863.peg.1676
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229863.peg.2010
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229863.peg.726
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229863.peg.723
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229863.peg.724
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229863.peg.425
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229863.peg.2331
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229863.peg.721
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.229863.peg.728
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229863.peg.270
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229863.peg.1264
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229863.peg.117
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229863.peg.581
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229863.peg.580
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229863.peg.579
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.229863.peg.2266
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229863.peg.2566
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229863.peg.727
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229863.peg.475
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229863.peg.722
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229863.peg.615
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229863.peg.1676
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229863.peg.2010
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229863.peg.726
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229863.peg.723
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229863.peg.724
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229863.peg.721
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.229863.peg.728
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229863.peg.1264
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229863.peg.1265
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229863.peg.2420
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229863.peg.581
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229863.peg.580
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229863.peg.579
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229863.peg.577
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.229863.peg.2266
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.229863.peg.1264
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.229863.peg.1265
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229863.peg.1676
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229863.peg.2010
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229863.peg.492
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229863.peg.295
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229863.peg.841
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1541
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1559
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1757
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229863.peg.468
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229863.peg.2110
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.229863.peg.904
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229863.peg.578
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.229863.peg.581
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.229863.peg.580
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.229863.peg.579
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.229863.peg.577
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.229863.peg.2266
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.229863.peg.105
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.229863.peg.105
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229863.peg.1009
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229863.peg.106
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229863.peg.1858
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229863.peg.256
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229863.peg.1717
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229863.peg.2533
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229863.peg.2566
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229863.peg.2519
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229863.peg.2168
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.229863.peg.2513
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily I	fig|6666666.229863.peg.395
Bile_hydrolysis	Choloylglycine hydrolase (EC 3.5.1.24)	fig|6666666.229863.peg.1368
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.229863.peg.1944
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229863.peg.291
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229863.peg.617
Biotin_biosynthesis	Biotin operon repressor	fig|6666666.229863.peg.1804
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229863.peg.1804
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229863.peg.199
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229863.peg.934
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229863.peg.290
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229863.peg.292
Biotin_biosynthesis	predicted biotin regulatory protein BioR (GntR family)	fig|6666666.229863.peg.1712
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229863.peg.905
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229863.peg.148
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229863.peg.847
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229863.peg.1990
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229863.peg.459
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229863.peg.778
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229863.peg.777
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229863.peg.779
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229863.peg.193
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229863.peg.2537
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229863.peg.189
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229863.peg.191
CBSS-176299.4.peg.1996A	Endoribonuclease L-PSP	fig|6666666.229863.peg.2540
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229863.peg.920
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229863.peg.1072
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229863.peg.1190
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229863.peg.1191
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229863.peg.1192
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229863.peg.2163
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229863.peg.1430
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229863.peg.2124
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229863.peg.2125
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229863.peg.606
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229863.peg.608
CBSS-224911.1.peg.435	Carboxyl-terminal protease (EC 3.4.21.102)	fig|6666666.229863.peg.132
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229863.peg.869
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229863.peg.1273
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229863.peg.941
CBSS-258594.1.peg.3339	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.229863.peg.452
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229863.peg.128
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229863.peg.557
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229863.peg.128
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229863.peg.557
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229863.peg.716
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229863.peg.717
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229863.peg.718
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229863.peg.1761
CBSS-292415.3.peg.2341	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229863.peg.2214
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229863.peg.186
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229863.peg.497
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229863.peg.495
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229863.peg.207
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229863.peg.2267
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229863.peg.2268
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229863.peg.2523
CBSS-314276.3.peg.1499	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229863.peg.2003
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229863.peg.997
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.229863.peg.999
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.229863.peg.998
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.229863.peg.314
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229863.peg.1127
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229863.peg.1612
CBSS-316057.3.peg.1308	RNA polymerase sigma-54 factor RpoN	fig|6666666.229863.peg.2213
CBSS-316273.3.peg.227	Alpha-2-macroglobulin	fig|6666666.229863.peg.2468
CBSS-316273.3.peg.227	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229863.peg.2462
CBSS-316407.3.peg.2816	Protein of unknown function DUF541	fig|6666666.229863.peg.355
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229863.peg.1740
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229863.peg.1740
CBSS-323098.3.peg.2823	Flagellar motor rotation protein MotB	fig|6666666.229863.peg.1867
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229863.peg.2307
CBSS-326442.4.peg.1852	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229863.peg.1413
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229863.peg.687
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229863.peg.689
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229863.peg.2214
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229863.peg.2456
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229863.peg.2052
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229863.peg.1836
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229863.peg.2364
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229863.peg.585
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229863.peg.584
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229863.peg.939
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229863.peg.1776
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229863.peg.580
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229863.peg.579
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.229863.peg.2266
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229863.peg.620
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229863.peg.636
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229863.peg.2006
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229863.peg.320
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229863.peg.2279
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229863.peg.398
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229863.peg.1634
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.1193
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.1742
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.2154
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229863.peg.76
CBSS-393130.3.peg.794	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229863.peg.2054
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229863.peg.2023
CBSS-469378.4.peg.430	FIG002344: Hydrolase (HAD superfamily)	fig|6666666.229863.peg.1614
CBSS-469378.4.peg.430	RecA protein	fig|6666666.229863.peg.1000
CBSS-521098.4.peg.1460	FIG001614: Membrane protein	fig|6666666.229863.peg.1673
CBSS-521098.4.peg.1460	FIG015373: Membrane protein	fig|6666666.229863.peg.1672
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229863.peg.683
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229863.peg.1533
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229863.peg.1534
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.229863.peg.685
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229863.peg.684
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229863.peg.686
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229863.peg.686
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229863.peg.2300
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229863.peg.2272
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229863.peg.662
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229863.peg.615
CBSS-83331.1.peg.3039	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229863.peg.2273
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229863.peg.578
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229863.peg.2270
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.1193
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.1742
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.2154
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229863.peg.899
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229863.peg.1239
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229863.peg.313
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229863.peg.456
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229863.peg.296
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229863.peg.295
CMP-N-acetylneuraminate_Biosynthesis	N-acetylneuraminate synthase (EC 2.5.1.56)	fig|6666666.229863.peg.917
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229863.peg.1526
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229863.peg.1525
CRISPRs	CRISPR-associated protein, Csn1 family	fig|6666666.229863.peg.1527
CRISPRs	CRISPR-associated protein, Csn2 family	fig|6666666.229863.peg.1524
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229863.peg.1937
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229863.peg.500
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229863.peg.2220
Cadmium_resistance	Cadmium efflux system accessory protein	fig|6666666.229863.peg.551
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229863.peg.1515
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229863.peg.450
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229863.peg.227
Calvin-Benson_cycle	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229863.peg.299
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229863.peg.1503
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229863.peg.2025
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.229863.peg.621
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229863.peg.689
Carbon_Starvation	Carbon starvation protein A	fig|6666666.229863.peg.1834
Carbon_Starvation	Carbon storage regulator	fig|6666666.229863.peg.2259
Carbon_storage_regulator	Carbon storage regulator	fig|6666666.229863.peg.2259
Carbon_storage_regulator	Flagellar assembly factor FliW	fig|6666666.229863.peg.2260
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229863.peg.399
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229863.peg.399
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229863.peg.1846
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229863.peg.1264
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229863.peg.1265
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229863.peg.2420
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229863.peg.1558
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229863.peg.1845
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229863.peg.1620
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229863.peg.1621
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229863.peg.2427
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229863.peg.500
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229863.peg.2220
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229863.peg.2217
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229863.peg.2219
Cell_Division_Subsystem_including_YidCD	RNA-binding protein Jag	fig|6666666.229863.peg.2221
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229863.peg.2218
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229863.peg.2102
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229863.peg.1045
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229863.peg.475
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229863.peg.601
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229863.peg.1397
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229863.peg.391
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229863.peg.1229
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229863.peg.2527
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229863.peg.869
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229863.peg.641
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229863.peg.589
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily S (as in PMID19099556)	fig|6666666.229863.peg.195
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229863.peg.702
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229863.peg.1822
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229863.peg.1518
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229863.peg.2053
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229863.peg.300
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229863.peg.301
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229863.peg.1741
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229863.peg.255
Chorismate_Synthesis	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229863.peg.436
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229863.peg.750
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229863.peg.300
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229863.peg.301
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229863.peg.2168
Citrate_Metabolism,_Transport,_and_Regulation	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25)	fig|6666666.229863.peg.416
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase alpha chain (EC 4.1.3.6)	fig|6666666.229863.peg.309
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.229863.peg.308
Citrate_Metabolism,_Transport,_and_Regulation	[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	fig|6666666.229863.peg.417
ClpAS_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229863.peg.2480
ClpAS_cluster	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229863.peg.2481
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229863.peg.281
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229863.peg.393
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229863.peg.300
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229863.peg.301
CoA_disulfide_thiol-disulfide_redox_system	CoA-disulfide reductase (EC 1.8.1.14)	fig|6666666.229863.peg.1695
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.229863.peg.2232
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.229863.peg.2225
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229863.peg.2230
Cobalamin_synthesis	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	fig|6666666.229863.peg.1640
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229863.peg.1257
Cobalamin_synthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.229863.peg.2231
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.229863.peg.1968
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.229863.peg.1249
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.229863.peg.1258
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.229863.peg.343
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.229863.peg.1248
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.229863.peg.2066
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.229863.peg.2288
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.229863.peg.1967
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.229863.peg.1940
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.229863.peg.992
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.229863.peg.1969
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229863.peg.1238
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229863.peg.2330
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229863.peg.1762
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.229863.peg.1502
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229863.peg.302
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229863.peg.557
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.229863.peg.2232
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.229863.peg.2225
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229863.peg.2230
Coenzyme_B12_biosynthesis	ChlD component of cobalt chelatase involved in B12 biosynthesis	fig|6666666.229863.peg.1119
Coenzyme_B12_biosynthesis	ChlD component of cobalt chelatase involved in B12 biosynthesis	fig|6666666.229863.peg.1603
Coenzyme_B12_biosynthesis	ChlI component of cobalt chelatase involved in B12 biosynthesis	fig|6666666.229863.peg.1118
Coenzyme_B12_biosynthesis	ChlI component of cobalt chelatase involved in B12 biosynthesis	fig|6666666.229863.peg.1119
Coenzyme_B12_biosynthesis	ChlI component of cobalt chelatase involved in B12 biosynthesis	fig|6666666.229863.peg.1603
Coenzyme_B12_biosynthesis	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	fig|6666666.229863.peg.1640
Coenzyme_B12_biosynthesis	CobN component of cobalt chelatase involved in B12 biosynthesis	fig|6666666.229863.peg.1120
Coenzyme_B12_biosynthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229863.peg.1257
Coenzyme_B12_biosynthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.229863.peg.2231
Coenzyme_B12_biosynthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.229863.peg.1968
Coenzyme_B12_biosynthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.229863.peg.1249
Coenzyme_B12_biosynthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.229863.peg.1258
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.229863.peg.343
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.229863.peg.1248
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)	fig|6666666.229863.peg.2240
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)	fig|6666666.229863.peg.2241
Coenzyme_B12_biosynthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.229863.peg.2066
Coenzyme_B12_biosynthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.229863.peg.2288
Coenzyme_B12_biosynthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.229863.peg.1967
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.229863.peg.1940
Coenzyme_B12_biosynthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.229863.peg.992
Coenzyme_B12_biosynthesis	Predicted cobalt ABC transporter periplasmic component	fig|6666666.229863.peg.2550
Coenzyme_B12_biosynthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.229863.peg.1969
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, ATPase component BtuD	fig|6666666.229863.peg.745
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, ATPase component BtuD	fig|6666666.229863.peg.1113
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, ATPase component BtuD	fig|6666666.229863.peg.1123
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, ATPase component BtuD	fig|6666666.229863.peg.1482
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, ATPase component BtuD	fig|6666666.229863.peg.2375
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.229863.peg.1111
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.229863.peg.1121
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.229863.peg.2373
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229863.peg.741
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229863.peg.1112
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229863.peg.1122
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229863.peg.2374
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229863.peg.272
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229863.peg.2207
Colicin_V_and_Bacteriocin_Production_Cluster	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229863.peg.1281
Colicin_V_and_Bacteriocin_Production_Cluster	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229863.peg.2210
Colicin_V_and_Bacteriocin_Production_Cluster	Colicin V production protein	fig|6666666.229863.peg.45
Colicin_V_and_Bacteriocin_Production_Cluster	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229863.peg.799
Colicin_V_and_Bacteriocin_Production_Cluster	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229863.peg.799
Colicin_V_and_Bacteriocin_Production_Cluster	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229863.peg.2338
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229863.peg.2053
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229863.peg.300
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229863.peg.301
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229863.peg.1741
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229863.peg.255
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229863.peg.750
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229863.peg.300
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229863.peg.301
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229863.peg.2168
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229863.peg.716
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229863.peg.2123
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229863.peg.296
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229863.peg.295
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229863.peg.389
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229863.peg.2534
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229863.peg.2025
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229863.peg.717
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229863.peg.718
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Serine/threonine protein kinase PrkC, regulator of stationary phase	fig|6666666.229863.peg.297
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1541
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1559
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1757
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229863.peg.468
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229863.peg.2110
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229863.peg.1752
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229863.peg.2084
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229863.peg.550
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229863.peg.1839
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229863.peg.550
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229863.peg.1839
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.229863.peg.2366
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229863.peg.683
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229863.peg.1533
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229863.peg.1534
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229863.peg.1691
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229863.peg.1691
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229863.peg.881
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	D-glycerate transporter (predicted)	fig|6666666.229863.peg.1643
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.177
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.318
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.504
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.614
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.901
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1117
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1345
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1499
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1642
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1747
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2079
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2134
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2388
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229863.peg.881
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	D-glycerate transporter (predicted)	fig|6666666.229863.peg.1643
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.177
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.318
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.504
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.614
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.901
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1117
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1345
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1499
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1642
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1747
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2079
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2134
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2388
D-gluconate_and_ketogluconates_metabolism	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229863.peg.1691
D-ribose_utilization	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229863.peg.299
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229863.peg.1503
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229863.peg.398
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229863.peg.303
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229863.peg.2084
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229863.peg.2417
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229863.peg.1558
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229863.peg.1845
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229863.peg.2035
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229863.peg.2036
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.229863.peg.388
DNA_processing_cluster	Protein involved in catabolism of external DNA	fig|6666666.229863.peg.1561
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229863.peg.387
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229863.peg.871
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229863.peg.562
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229863.peg.2135
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229863.peg.914
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229863.peg.2099
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229863.peg.904
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229863.peg.628
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229863.peg.364
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229863.peg.1133
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229863.peg.1209
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229863.peg.1361
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229863.peg.1552
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.229863.peg.206
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229863.peg.863
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229863.peg.2543
DNA_repair,_bacterial	Exonuclease SbcC	fig|6666666.229863.peg.1678
DNA_repair,_bacterial	Exonuclease SbcD	fig|6666666.229863.peg.1679
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229863.peg.328
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229863.peg.1634
DNA_repair,_bacterial	RecA protein	fig|6666666.229863.peg.1000
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229863.peg.264
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229863.peg.1188
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229863.peg.30
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229863.peg.2542
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229863.peg.2018
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229863.peg.2019
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.229863.peg.486
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229863.peg.1528
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.229863.peg.1433
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229863.peg.1621
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229863.peg.1432
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.229863.peg.1000
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229863.peg.387
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229863.peg.264
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229863.peg.1188
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229863.peg.2417
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.229863.peg.1000
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase Rep	fig|6666666.229863.peg.969
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229863.peg.320
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229863.peg.2279
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229863.peg.2018
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229863.peg.2019
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.229863.peg.1000
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229863.peg.389
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229863.peg.1846
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229863.peg.1558
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229863.peg.1845
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229863.peg.1620
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229863.peg.1621
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.229863.peg.442
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.229863.peg.233
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229863.peg.716
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229863.peg.1558
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229863.peg.1845
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229863.peg.2489
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229863.peg.2364
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229863.peg.439
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229863.peg.2210
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.229863.peg.116
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.229863.peg.660
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.229863.peg.1185
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.229863.peg.1186
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229863.peg.116
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.229863.peg.661
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.229863.peg.530
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.229863.peg.649
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229863.peg.115
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229863.peg.1906
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.229863.peg.1716
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.229863.peg.1716
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.229863.peg.2501
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.229863.peg.896
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.229863.peg.896
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229863.peg.880
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229863.peg.2497
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229863.peg.2498
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229863.peg.2358
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229863.peg.1419
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229863.peg.1404
Deoxyribose_and_Deoxynucleoside_Catabolism	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229863.peg.2416
Dihydroxyacetone_kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), ADP-binding subunit	fig|6666666.229863.peg.2255
Dihydroxyacetone_kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), dihydroxyacetone binding subunit	fig|6666666.229863.peg.2254
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229863.peg.2379
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229863.peg.291
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229863.peg.617
ECF_class_transporters	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229863.peg.2472
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.336
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.340
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.966
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.972
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.1570
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.1594
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.1607
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.2000
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.2446
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229863.peg.334
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229863.peg.342
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229863.peg.965
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229863.peg.974
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229863.peg.1568
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229863.peg.1592
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229863.peg.1609
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229863.peg.1998
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229863.peg.2445
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229863.peg.290
ECF_class_transporters	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229863.peg.2473
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.335
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.341
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.967
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.973
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.1569
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.1593
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.1608
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.1999
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.2155
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.2447
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229863.peg.2448
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229863.peg.292
ECF_class_transporters	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229863.peg.2471
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229863.peg.1691
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229863.peg.1691
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229863.peg.928
Entner-Doudoroff_Pathway	Hexokinase (EC 2.7.1.1)	fig|6666666.229863.peg.2144
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229863.peg.450
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229863.peg.227
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229863.peg.244
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229863.peg.2016
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229863.peg.2083
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229863.peg.941
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229863.peg.1803
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.229863.peg.514
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229863.peg.1050
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229863.peg.1273
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.229863.peg.1269
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.229863.peg.1282
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229863.peg.1281
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.229863.peg.854
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229863.peg.1279
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229863.peg.1280
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.229863.peg.107
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.229863.peg.1270
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229863.peg.941
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229863.peg.1504
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229863.peg.1803
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229863.peg.941
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229863.peg.1771
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229863.peg.1794
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.229863.peg.882
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229863.peg.1504
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229863.peg.1803
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229863.peg.48
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229863.peg.444
Flagellar_motility	Flagellar basal-body rod modification protein FlgD	fig|6666666.229863.peg.1863
Flagellar_motility	Flagellar biosynthesis protein FlhA	fig|6666666.229863.peg.1790
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229863.peg.1791
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229863.peg.2313
Flagellar_motility	Flagellar biosynthesis protein FlhF	fig|6666666.229863.peg.1941
Flagellar_motility	Flagellar biosynthesis protein FliR	fig|6666666.229863.peg.1792
Flagellar_motility	Flagellar motor rotation protein MotA	fig|6666666.229863.peg.1866
Flagellar_motility	Flagellar motor rotation protein MotB	fig|6666666.229863.peg.1867
Flagellar_motility	Flagellar motor switch protein FliM	fig|6666666.229863.peg.1869
Flagellar_motility	Flagellar motor switch protein FliN	fig|6666666.229863.peg.1870
Flagellar_motility	Flagellar synthesis regulator FleN	fig|6666666.229863.peg.1942
Flagellar_motility	Flagellum-specific ATP synthase FliI	fig|6666666.229863.peg.706
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.229863.peg.2213
Flagellar_motility	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229863.peg.447
Flagellum	Flagellar M-ring protein FliF	fig|6666666.229863.peg.709
Flagellum	Flagellar assembly protein FliH	fig|6666666.229863.peg.707
Flagellum	Flagellar basal-body rod modification protein FlgD	fig|6666666.229863.peg.1863
Flagellum	Flagellar basal-body rod protein FlgB	fig|6666666.229863.peg.712
Flagellum	Flagellar basal-body rod protein FlgC	fig|6666666.229863.peg.711
Flagellum	Flagellar basal-body rod protein FlgF	fig|6666666.229863.peg.875
Flagellum	Flagellar basal-body rod protein FlgG	fig|6666666.229863.peg.874
Flagellum	Flagellar biosynthesis protein FlhA	fig|6666666.229863.peg.1790
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229863.peg.1791
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229863.peg.2313
Flagellum	Flagellar biosynthesis protein FlhF	fig|6666666.229863.peg.1941
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229863.peg.1868
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229863.peg.2293
Flagellum	Flagellar biosynthesis protein FliP	fig|6666666.229863.peg.1872
Flagellum	Flagellar biosynthesis protein FliQ	fig|6666666.229863.peg.1793
Flagellum	Flagellar biosynthesis protein FliR	fig|6666666.229863.peg.1792
Flagellum	Flagellar biosynthesis protein FliS	fig|6666666.229863.peg.1726
Flagellum	Flagellar biosynthesis protein FliZ	fig|6666666.229863.peg.1871
Flagellum	Flagellar hook protein FlgE	fig|6666666.229863.peg.1864
Flagellum	Flagellar hook-associated protein FlgK	fig|6666666.229863.peg.2262
Flagellum	Flagellar hook-associated protein FlgL	fig|6666666.229863.peg.2261
Flagellum	Flagellar hook-associated protein FliD	fig|6666666.229863.peg.464
Flagellum	Flagellar hook-basal body complex protein FliE	fig|6666666.229863.peg.710
Flagellum	Flagellar hook-length control protein FliK	fig|6666666.229863.peg.1862
Flagellum	Flagellar motor rotation protein MotA	fig|6666666.229863.peg.1866
Flagellum	Flagellar motor rotation protein MotB	fig|6666666.229863.peg.1867
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229863.peg.643
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229863.peg.708
Flagellum	Flagellar motor switch protein FliM	fig|6666666.229863.peg.1869
Flagellum	Flagellar motor switch protein FliN	fig|6666666.229863.peg.1870
Flagellum	Flagellar protein FlbB	fig|6666666.229863.peg.596
Flagellum	Flagellar protein FlbD	fig|6666666.229863.peg.1865
Flagellum	Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)	fig|6666666.229863.peg.873
Flagellum	Flagellar protein FliJ	fig|6666666.229863.peg.705
Flagellum	Flagellar synthesis regulator FleN	fig|6666666.229863.peg.1942
Flagellum	Flagellin protein FlaA	fig|6666666.229863.peg.461
Flagellum	Flagellin protein FlaA	fig|6666666.229863.peg.462
Flagellum	Flagellin protein FlaA	fig|6666666.229863.peg.877
Flagellum	Flagellin protein FlaG	fig|6666666.229863.peg.463
Flagellum	Flagellum-specific ATP synthase FliI	fig|6666666.229863.peg.706
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229863.peg.584
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229863.peg.939
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229863.peg.1776
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.229863.peg.2213
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229863.peg.615
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgB	fig|6666666.229863.peg.712
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgC	fig|6666666.229863.peg.711
Flagellum_in_Campylobacter	Flagellar hook-basal body complex protein FliE	fig|6666666.229863.peg.710
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229863.peg.461
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229863.peg.462
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229863.peg.877
Flavodoxin	Flavodoxin	fig|6666666.229863.peg.746
Flavodoxin	Flavodoxin	fig|6666666.229863.peg.1588
Flavodoxin	Flavodoxin	fig|6666666.229863.peg.1686
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229863.peg.887
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229863.peg.799
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229863.peg.799
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229863.peg.1424
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.229863.peg.1543
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229863.peg.601
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229863.peg.1397
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229863.peg.391
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229863.peg.589
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229863.peg.344
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229863.peg.2437
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229863.peg.483
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229863.peg.1760
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229863.peg.91
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229863.peg.2438
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229863.peg.2439
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229863.peg.224
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229863.peg.224
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229863.peg.483
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229863.peg.127
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229863.peg.211
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.229863.peg.1396
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229863.peg.883
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229863.peg.883
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229863.peg.272
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229863.peg.2207
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229863.peg.27
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229863.peg.488
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229863.peg.1268
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229863.peg.2146
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229863.peg.1450
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229863.peg.883
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229863.peg.883
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229863.peg.2214
Glutathione:_Redox_cycle	Glutathione peroxidase (EC 1.11.1.9)	fig|6666666.229863.peg.212
Glycerate_metabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229863.peg.881
Glycerate_metabolism	D-glycerate transporter (predicted)	fig|6666666.229863.peg.1643
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.177
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.318
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.504
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.614
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.901
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1117
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1345
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1499
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1642
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1747
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2079
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2134
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2388
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229863.peg.2083
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229863.peg.98
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229863.peg.99
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.229863.peg.2531
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.229863.peg.2532
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229863.peg.1711
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229863.peg.1981
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229863.peg.2518
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229863.peg.920
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229863.peg.1072
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	NADH peroxidase (EC 1.11.1.1)	fig|6666666.229863.peg.1749
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Probable glycerol transport protein	fig|6666666.229863.peg.1073
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229863.peg.854
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229863.peg.1771
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229863.peg.1794
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229863.peg.2103
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229863.peg.565
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229863.peg.1958
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229863.peg.2050
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.177
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.318
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.504
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.614
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.901
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1117
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1345
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1499
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1642
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1747
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2079
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2134
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2388
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229863.peg.98
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229863.peg.99
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229863.peg.1711
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229863.peg.1981
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229863.peg.2518
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229863.peg.2271
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229863.peg.2413
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229863.peg.2216
Glycine_Biosynthesis	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.229863.peg.1842
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229863.peg.1959
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229863.peg.2413
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229863.peg.313
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229863.peg.323
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.177
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.318
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.504
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.614
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.901
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1117
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1345
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1499
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1642
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1747
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2079
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2134
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2388
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.229863.peg.314
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229863.peg.315
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229863.peg.316
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229863.peg.432
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229863.peg.431
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229863.peg.42
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229863.peg.1959
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229863.peg.2307
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229863.peg.313
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229863.peg.311
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.229863.peg.314
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229863.peg.315
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229863.peg.316
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B alpha subunit (EC 1.21.4.4)	fig|6666666.229863.peg.1769
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229863.peg.1766
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229863.peg.1767
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229863.peg.1768
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B alpha subunit (EC 1.21.4.2)	fig|6666666.229863.peg.2485
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B beta subunit (EC 1.21.4.2)	fig|6666666.229863.peg.2485
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229863.peg.2486
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229863.peg.2487
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229863.peg.2488
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 1	fig|6666666.229863.peg.1610
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 2	fig|6666666.229863.peg.1611
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229863.peg.1124
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229863.peg.1125
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229863.peg.1126
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229863.peg.1127
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229863.peg.1612
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229863.peg.1128
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229863.peg.2227
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229863.peg.2574
Glycogen_metabolism	Glycogen branching enzyme, GH-57-type, archaeal (EC 2.4.1.18)	fig|6666666.229863.peg.789
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229863.peg.1744
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229863.peg.2206
Glycogen_metabolism	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229863.peg.356
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229863.peg.1913
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229863.peg.928
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229863.peg.1515
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229863.peg.2049
Glycolysis_and_Gluconeogenesis	Hexokinase (EC 2.7.1.1)	fig|6666666.229863.peg.2144
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229863.peg.450
Glycolysis_and_Gluconeogenesis	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229863.peg.1506
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229863.peg.227
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229863.peg.244
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229863.peg.2016
Glycolysis_and_Gluconeogenesis	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit (EC 2.7.1.90)	fig|6666666.229863.peg.1782
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.229863.peg.385
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.229863.peg.386
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229863.peg.2083
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229863.peg.437
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229863.peg.1029
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229863.peg.689
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229863.peg.1432
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229863.peg.117
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229863.peg.1826
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229863.peg.683
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229863.peg.1533
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229863.peg.1534
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229863.peg.684
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229863.peg.686
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229863.peg.1243
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229863.peg.2522
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229863.peg.1244
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229863.peg.748
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229863.peg.940
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229863.peg.1245
Group_II_intron-associated_genes	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	fig|6666666.229863.peg.2345
HPr_catabolite_repression_system	Catabolite repression HPr-like protein Crh	fig|6666666.229863.peg.635
HPr_catabolite_repression_system	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229863.peg.634
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229863.peg.1243
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229863.peg.2522
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229863.peg.1244
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229863.peg.1245
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.229863.peg.470
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.229863.peg.747
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229863.peg.2341
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229863.peg.133
Heat_shock_dnaK_gene_cluster_extended	Signal peptidase-like protein	fig|6666666.229863.peg.1732
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229863.peg.119
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229863.peg.1649
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229863.peg.124
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229863.peg.472
Hfl_operon	GTP-binding protein HflX	fig|6666666.229863.peg.1881
Hfl_operon	HflC protein	fig|6666666.229863.peg.597
Hfl_operon	HflK protein	fig|6666666.229863.peg.598
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229863.peg.1557
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.229863.peg.1283
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.229863.peg.1798
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.229863.peg.2015
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229863.peg.840
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229863.peg.2341
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229863.peg.1542
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229863.peg.1756
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1541
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1559
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1757
Hypothetical_protein_HNE_2485	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229863.peg.2068
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229863.peg.1124
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229863.peg.1126
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229863.peg.1766
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229863.peg.1768
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229863.peg.2153
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229863.peg.2486
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229863.peg.2488
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.229863.peg.205
Integrons	Integron integrase IntIPac	fig|6666666.229863.peg.161
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229863.peg.1848
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229863.peg.716
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229863.peg.686
Inteins	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229863.peg.1506
Inteins	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229863.peg.1067
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229863.peg.599
Inteins	Translation initiation factor 2	fig|6666666.229863.peg.777
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, ATP-binding subunit	fig|6666666.229863.peg.423
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, permease protein 2	fig|6666666.229863.peg.424
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, substrate binding protein	fig|6666666.229863.peg.426
Iron_transport_system_including_ABC_transporter	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229863.peg.428
Iron_transport_system_including_ABC_transporter	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229863.peg.427
Isoleucine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.229863.peg.1261
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229863.peg.399
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229863.peg.2272
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229863.peg.104
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229863.peg.662
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229863.peg.2322
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229863.peg.2323
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229863.peg.592
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229863.peg.787
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229863.peg.399
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229863.peg.2270
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229863.peg.399
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229863.peg.399
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229863.peg.399
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229863.peg.399
Isoprenoinds_for_Quinones	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229863.peg.90
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229863.peg.400
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229863.peg.2270
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229863.peg.989
KH_domain_RNA_binding_protein_YlqC	KH domain RNA binding protein YlqC	fig|6666666.229863.peg.990
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229863.peg.991
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.229863.peg.1387
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229863.peg.2194
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229863.peg.2192
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229863.peg.2193
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229863.peg.2195
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229863.peg.2190
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229863.peg.1159
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229863.peg.2191
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229863.peg.186
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229863.peg.497
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229863.peg.573
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229863.peg.483
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229863.peg.127
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229863.peg.211
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229863.peg.1412
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229863.peg.2316
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229863.peg.2394
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229863.peg.2390
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	fig|6666666.229863.peg.2391
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229863.peg.186
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229863.peg.497
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229863.peg.127
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229863.peg.211
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229863.peg.311
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-)	fig|6666666.229863.peg.1147
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229863.peg.363
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229863.peg.384
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229863.peg.1977
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229863.peg.234
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229863.peg.2315
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229863.peg.2006
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229863.peg.536
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229863.peg.1816
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229863.peg.2569
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229863.peg.2568
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229863.peg.2570
LysR-family_proteins_in_Escherichia_coli	Chromosome initiation inhibitor	fig|6666666.229863.peg.1455
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229863.peg.1218
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229863.peg.1701
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.229863.peg.1777
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229863.peg.585
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229863.peg.584
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229863.peg.939
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229863.peg.1776
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229863.peg.2140
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229863.peg.2110
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229863.peg.683
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229863.peg.1533
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229863.peg.1534
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229863.peg.848
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229863.peg.1010
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.229863.peg.1911
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229863.peg.2227
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229863.peg.573
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229863.peg.2206
Maltose_and_Maltodextrin_Utilization	Oligo-1,6-glucosidase (EC 3.2.1.10)	fig|6666666.229863.peg.1738
Mannitol_Utilization	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229863.peg.634
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229863.peg.1760
MazEF_toxin-antitoxing_(programmed_cell_death)_system	Programmed cell death antitoxin YdcD	fig|6666666.229863.peg.2059
MazEF_toxin-antitoxing_(programmed_cell_death)_system	Programmed cell death toxin YdcE	fig|6666666.229863.peg.2058
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229863.peg.899
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229863.peg.1239
Methanogenesis_strays	Ni2+-binding GTPase involved in regulation of expression and maturation of hydrogenase	fig|6666666.229863.peg.1391
Methanogenesis_strays	Uncharacterized ABC transporter ATP-binding protein MJ0121	fig|6666666.229863.peg.1392
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229863.peg.1181
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.229863.peg.2409
Methionine_Degradation	Methionine transporter MetT	fig|6666666.229863.peg.2404
Methionine_Degradation	Methionine transporter MetT	fig|6666666.229863.peg.2405
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229863.peg.1207
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229863.peg.2410
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229863.peg.1740
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229863.peg.2143
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229863.peg.1740
Methionine_Salvage	5-methylthioribose kinase (EC 2.7.1.100)	fig|6666666.229863.peg.1183
Methionine_Salvage	Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)	fig|6666666.229863.peg.274
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229863.peg.2103
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229863.peg.2103
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229863.peg.2214
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229863.peg.2011
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229863.peg.362
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229863.peg.124
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32)	fig|6666666.229863.peg.419
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32)	fig|6666666.229863.peg.418
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.827
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.943
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.1061
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.1251
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.1505
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.1522
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.1560
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229863.peg.1919
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229863.peg.2138
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229863.peg.899
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229863.peg.1239
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229863.peg.2456
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229863.peg.228
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229863.peg.1379
Murein_Hydrolases	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	fig|6666666.229863.peg.2334
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229863.peg.2196
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229863.peg.2197
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229863.peg.500
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229863.peg.2220
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Protein YidD	fig|6666666.229863.peg.2219
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	RNA-binding protein Jag	fig|6666666.229863.peg.2221
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.229863.peg.2451
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.229863.peg.2450
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.229863.peg.2449
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229863.peg.835
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229863.peg.834
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229863.peg.833
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229863.peg.1567
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229863.peg.1104
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229863.peg.702
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229863.peg.1822
N-linked_Glycosylation_in_Bacteria	Phospholipid-lipopolysaccharide ABC transporter	fig|6666666.229863.peg.2186
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229863.peg.186
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229863.peg.497
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229863.peg.1836
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.229863.peg.535
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229863.peg.347
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.229863.peg.535
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229863.peg.1675
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.229863.peg.194
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229863.peg.118
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.229863.peg.545
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229863.peg.544
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229863.peg.1035
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229863.peg.1036
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229863.peg.1037
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229863.peg.1038
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229863.peg.1039
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Sodium-dependent phosphate transporter	fig|6666666.229863.peg.54
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229863.peg.2438
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229863.peg.2439
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.229863.peg.1389
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.229863.peg.1388
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229863.peg.2272
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229863.peg.104
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229863.peg.662
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229863.peg.2322
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229863.peg.2323
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229863.peg.592
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229863.peg.787
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229863.peg.2328
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229863.peg.1836
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229863.peg.840
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.229863.peg.1555
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229863.peg.775
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229863.peg.778
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229863.peg.776
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229863.peg.777
Omega_peptidases_(EC_3.4.19.-)	Acylamino-acid-releasing enzyme (EC 3.4.19.1)	fig|6666666.229863.peg.1745
Omega_peptidases_(EC_3.4.19.-)	Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	fig|6666666.229863.peg.1674
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229863.peg.887
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229863.peg.1827
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229863.peg.1799
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229863.peg.1833
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229863.peg.1833
Oxidative_stress	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229863.peg.1835
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.229863.peg.103
Oxidative_stress	Rubrerythrin	fig|6666666.229863.peg.1434
Oxidative_stress	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229863.peg.185
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.229863.peg.2005
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229863.peg.299
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229863.peg.1503
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229863.peg.1906
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229863.peg.2025
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.229863.peg.621
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229863.peg.1163
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229863.peg.1163
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229863.peg.615
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229863.peg.2229
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229863.peg.899
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229863.peg.1239
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229863.peg.488
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229863.peg.200
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229863.peg.578
Peptidoglycan_Biosynthesis	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229863.peg.2462
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.229863.peg.2360
Peptidoglycan_Biosynthesis	Rare lipoprotein A precursor	fig|6666666.229863.peg.2579
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.229863.peg.577
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229863.peg.1751
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229863.peg.1231
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229863.peg.44
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229863.peg.798
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229863.peg.1484
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229863.peg.725
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229863.peg.2229
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229863.peg.798
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229863.peg.1484
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--L-ornithine ligase	fig|6666666.229863.peg.1048
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229863.peg.725
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.229863.peg.1513
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229863.peg.2327
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229863.peg.91
Periplasmic_Stress_Response	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229863.peg.2273
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229863.peg.2020
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegS	fig|6666666.229863.peg.2314
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229863.peg.1272
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229863.peg.2362
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229863.peg.1271
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229863.peg.2363
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death antitoxin YdcD	fig|6666666.229863.peg.2059
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death toxin MazF like	fig|6666666.229863.peg.2086
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death toxin YdcE	fig|6666666.229863.peg.2058
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229863.peg.436
Phosphoenolpyruvate_phosphomutase	2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)	fig|6666666.229863.peg.520
Phosphoenolpyruvate_phosphomutase	Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)	fig|6666666.229863.peg.522
Phosphoenolpyruvate_phosphomutase	Phosphonopyruvate decarboxylase (EC 4.1.1.82)	fig|6666666.229863.peg.521
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229863.peg.2230
Phosphoglycerate_mutase_protein_family	Carboxyl-terminal protease (EC 3.4.21.102)	fig|6666666.229863.peg.132
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229863.peg.244
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229863.peg.2016
Photorespiration_(oxidative_C2_cycle)	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229863.peg.881
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229863.peg.313
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229863.peg.311
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.177
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.318
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.504
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.614
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.901
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1117
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1345
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1499
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1642
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1747
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2079
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2134
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2388
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.229863.peg.314
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229863.peg.315
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229863.peg.316
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229863.peg.1913
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229863.peg.1959
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229863.peg.1264
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229863.peg.1265
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229863.peg.2420
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229863.peg.488
Polyadenylation_bacterial	Poly(A) polymerase (EC 2.7.7.19)	fig|6666666.229863.peg.216
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229863.peg.841
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229863.peg.849
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229863.peg.1740
Polyamine_Metabolism	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229863.peg.773
Polyamine_Metabolism	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229863.peg.2137
Polyamine_Metabolism	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229863.peg.773
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229863.peg.1668
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.229863.peg.1261
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229863.peg.399
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229863.peg.399
Polyprenyl_Diphosphate_Biosynthesis	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229863.peg.90
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229863.peg.400
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229863.peg.2270
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229863.peg.2327
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229863.peg.91
Potassium_homeostasis	Glutathione-regulated potassium-efflux system ancillary protein KefG	fig|6666666.229863.peg.1501
Potassium_homeostasis	Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase)	fig|6666666.229863.peg.1819
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229863.peg.2319
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229863.peg.1542
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229863.peg.1756
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229863.peg.1542
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229863.peg.1756
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1541
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1559
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1757
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1541
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1559
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229863.peg.1757
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229863.peg.2563
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229863.peg.2563
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.229863.peg.1857
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229863.peg.883
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229863.peg.1803
Proteasome_bacterial	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229863.peg.268
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229863.peg.269
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229863.peg.2226
Proteasome_bacterial	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229863.peg.713
Proteasome_bacterial	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229863.peg.714
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229863.peg.1202
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229863.peg.864
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229863.peg.865
Proteasome_bacterial	Site-specific tyrosine recombinase	fig|6666666.229863.peg.715
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229863.peg.1243
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229863.peg.2522
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229863.peg.1244
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229863.peg.2133
Protein_chaperones	ClpB protein	fig|6666666.229863.peg.2287
Protein_chaperones	ClpB protein	fig|6666666.229863.peg.2573
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229863.peg.1245
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229863.peg.1829
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229863.peg.2176
Protein_degradation	Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)	fig|6666666.229863.peg.2479
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229863.peg.2480
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229863.peg.268
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229863.peg.2481
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229863.peg.269
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229863.peg.2226
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229863.peg.713
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229863.peg.714
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229863.peg.1202
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229863.peg.864
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229863.peg.865
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229863.peg.2287
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229863.peg.2573
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229863.peg.2099
Proteolysis_in_bacteria,_ATP-dependent	Nucleotide excision repair protein, with UvrB/UvrC motif	fig|6666666.229863.peg.2571
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegS	fig|6666666.229863.peg.2314
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229863.peg.400
Purine_Utilization	Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4)	fig|6666666.229863.peg.1145
Purine_Utilization	Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)	fig|6666666.229863.peg.1144
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.229863.peg.571
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229863.peg.1002
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229863.peg.2353
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229863.peg.257
Purine_conversions	Adenosine deaminase (EC 3.5.4.4)	fig|6666666.229863.peg.1661
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229863.peg.770
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229863.peg.439
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229863.peg.224
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229863.peg.224
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229863.peg.391
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229863.peg.1961
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229863.peg.1404
Purine_conversions	dNTP triphosphohydrolase, putative	fig|6666666.229863.peg.528
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229863.peg.863
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229863.peg.2543
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229863.peg.224
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229863.peg.224
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229863.peg.1961
Putative_TldE-TldD_proteolytic_complex	TldD family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229863.peg.2211
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229863.peg.620
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229863.peg.636
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229863.peg.619
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229863.peg.637
Putative_TldE-TldD_proteolytic_complex	TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229863.peg.2212
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229863.peg.1163
Pyrimidine_utilization	Uracil permease	fig|6666666.229863.peg.2358
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229863.peg.1207
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229863.peg.2410
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.229863.peg.788
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229863.peg.432
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229863.peg.431
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Malate Na(+) symporter	fig|6666666.229863.peg.1928
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229863.peg.2169
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229863.peg.1506
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229863.peg.2083
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229863.peg.437
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229863.peg.1029
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229863.peg.941
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.229863.peg.1074
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229863.peg.2103
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229863.peg.1197
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229863.peg.2336
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229863.peg.1803
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.229863.peg.2223
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229863.peg.126
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229863.peg.1199
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229863.peg.1659
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229863.peg.2142
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229863.peg.2406
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229863.peg.1024
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229863.peg.2163
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229863.peg.1430
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229863.peg.300
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229863.peg.301
RNA_3'-terminal_phosphate_cyclase	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229863.peg.1067
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229863.peg.128
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)	fig|6666666.229863.peg.102
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229863.peg.493
RNA_methylation	LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM	fig|6666666.229863.peg.2077
RNA_methylation	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229863.peg.50
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229863.peg.2534
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229863.peg.133
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229863.peg.802
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229863.peg.1109
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229863.peg.2102
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229863.peg.988
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229863.peg.752
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229863.peg.1795
RNA_methylation	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229863.peg.2002
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229863.peg.1182
RNA_methylation	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229863.peg.2524
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229863.peg.1264
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229863.peg.1265
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229863.peg.2420
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229863.peg.2427
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229863.peg.2102
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229863.peg.1045
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229863.peg.2427
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229863.peg.500
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229863.peg.2220
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229863.peg.2217
RNA_modification_cluster	Protein YidD	fig|6666666.229863.peg.2219
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229863.peg.2218
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229863.peg.1080
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229863.peg.2196
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229863.peg.2197
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229863.peg.459
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229863.peg.853
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229863.peg.997
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229863.peg.548
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229863.peg.800
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229863.peg.2046
RNA_pseudouridine_syntheses	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229863.peg.1013
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229863.peg.2412
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229863.peg.2338
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229863.peg.779
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcC	fig|6666666.229863.peg.1678
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcD	fig|6666666.229863.peg.1679
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229863.peg.2379
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229863.peg.228
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229863.peg.1379
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229863.peg.450
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229863.peg.1197
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229863.peg.2336
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229863.peg.1675
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229863.peg.1558
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229863.peg.1845
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229863.peg.2489
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229863.peg.2364
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229863.peg.1711
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229863.peg.1981
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229863.peg.1275
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229863.peg.1487
Restriction-Modification_System	Putative predicted metal-dependent hydrolase	fig|6666666.229863.peg.1489
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229863.peg.1485
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229863.peg.1885
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229863.peg.1488
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229863.peg.1884
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229863.peg.1486
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229863.peg.1887
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229863.peg.1888
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229863.peg.1891
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229863.peg.1746
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229863.peg.496
Rhamnose_containing_glycans	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229863.peg.518
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229863.peg.186
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229863.peg.497
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.229863.peg.1158
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229863.peg.495
Rhamnose_containing_glycans	putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide	fig|6666666.229863.peg.516
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229863.peg.843
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229863.peg.1773
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229863.peg.843
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229863.peg.1773
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229863.peg.451
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229863.peg.843
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229863.peg.1773
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.827
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.943
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.1061
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.1251
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.1505
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.1522
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229863.peg.1560
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229863.peg.843
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229863.peg.1773
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229863.peg.779
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229863.peg.2052
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229863.peg.389
Ribonucleases_in_Bacillus	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229863.peg.492
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229863.peg.389
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229863.peg.150
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229863.peg.599
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229863.peg.1514
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229863.peg.1520
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.229863.peg.600
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229863.peg.2011
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229863.peg.835
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229863.peg.1086
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229863.peg.989
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229863.peg.548
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229863.peg.800
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229863.peg.2046
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229863.peg.802
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229863.peg.1109
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229863.peg.2412
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229863.peg.468
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229863.peg.988
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229863.peg.2480
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229863.peg.2269
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229863.peg.2267
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229863.peg.2268
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229863.peg.2523
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229863.peg.1070
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229863.peg.1196
Rubrerythrin	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229863.peg.1835
Rubrerythrin	Rubredoxin	fig|6666666.229863.peg.830
Rubrerythrin	Rubrerythrin	fig|6666666.229863.peg.1434
Rubrerythrin	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229863.peg.185
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.229863.peg.142
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229863.peg.451
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229863.peg.143
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229863.peg.101
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.229863.peg.2136
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229863.peg.2152
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229863.peg.2153
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.229863.peg.55
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229863.peg.1124
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229863.peg.1126
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229863.peg.1766
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229863.peg.1768
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229863.peg.2153
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229863.peg.2486
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229863.peg.2488
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229863.peg.887
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.229863.peg.928
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229863.peg.1827
Serine-glyoxylate_cycle	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229863.peg.1799
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229863.peg.418
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229863.peg.419
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.177
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.318
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.504
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.614
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.901
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1117
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1345
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1499
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1642
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.1747
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2079
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2134
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229863.peg.2388
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229863.peg.1833
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229863.peg.1833
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229863.peg.1959
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229863.peg.323
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229863.peg.42
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229863.peg.42
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229863.peg.1959
Serine_endopeptidase_(EC_3.4.21.-)	Prolyl endopeptidase (EC 3.4.21.26)	fig|6666666.229863.peg.730
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229863.peg.90
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Hypothetical similar to thiamin biosynthesis lipoprotein ApbE	fig|6666666.229863.peg.2007
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229863.peg.2006
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229863.peg.654
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229863.peg.812
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229863.peg.813
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229863.peg.1876
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229863.peg.1994
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229863.peg.2559
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229863.peg.760
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229863.peg.1240
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229863.peg.2525
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.229863.peg.1944
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229863.peg.759
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229863.peg.1241
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229863.peg.1242
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229863.peg.759
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229863.peg.761
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229863.peg.2006
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229863.peg.471
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229863.peg.616
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229863.peg.2387
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229863.peg.1229
Sporulation-associated_proteins_with_broader_functions	Protein of unknown function identified by role in sporulation (SpoVG)	fig|6666666.229863.peg.591
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229863.peg.748
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229863.peg.265
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229863.peg.472
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.229863.peg.1205
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229863.peg.2322
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229863.peg.2323
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229863.peg.475
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229863.peg.726
Stationary_phase_repair_cluster	FIG139438: lipoprotein B	fig|6666666.229863.peg.534
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229863.peg.1724
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, large permease component	fig|6666666.229863.peg.861
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, periplasmic component	fig|6666666.229863.peg.860
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229863.peg.2323
Teichoic_and_lipoteichoic_acids_biosynthesis	N-acetylmannosaminyltransferase (EC 2.4.1.187)	fig|6666666.229863.peg.134
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229863.peg.518
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid translocation permease protein TagG	fig|6666666.229863.peg.519
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229863.peg.1957
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229863.peg.14
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229863.peg.339
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229863.peg.1579
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229863.peg.1605
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229863.peg.1617
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229863.peg.1997
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229863.peg.15
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229863.peg.1996
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229863.peg.2063
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229863.peg.14
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229863.peg.339
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229863.peg.1579
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229863.peg.1605
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229863.peg.1617
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229863.peg.1997
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229863.peg.15
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229863.peg.1996
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229863.peg.2063
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229863.peg.833
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229863.peg.1567
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229863.peg.833
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229863.peg.1567
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229863.peg.104
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229863.peg.1702
Thiamin_biosynthesis	Thiamin ABC transporter, substrate-binding component	fig|6666666.229863.peg.1704
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229863.peg.978
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229863.peg.980
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229863.peg.1703
Thiamin_biosynthesis	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229863.peg.2054
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229863.peg.1128
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229863.peg.941
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229863.peg.1803
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229863.peg.272
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229863.peg.2207
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229863.peg.1951
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229863.peg.2415
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229863.peg.2216
Threonine_degradation	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.229863.peg.1842
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229863.peg.254
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229863.peg.401
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229863.peg.1802
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229863.peg.1929
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229863.peg.364
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229863.peg.1133
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229863.peg.1209
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229863.peg.1361
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229863.peg.1552
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229863.peg.293
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229863.peg.329
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229863.peg.1428
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229863.peg.1765
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229863.peg.2170
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229863.peg.40
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229863.peg.1135
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229863.peg.1626
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229863.peg.41
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229863.peg.1136
Toxin-antitoxin_replicon_stabilization_systems	VapB protein (antitoxin to VapC)	fig|6666666.229863.peg.481
Toxin-antitoxin_replicon_stabilization_systems	VapB protein (antitoxin to VapC)	fig|6666666.229863.peg.2478
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229863.peg.2477
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229863.peg.1362
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229863.peg.1551
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229863.peg.64
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229863.peg.2047
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229863.peg.1134
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229863.peg.1210
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229863.peg.775
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229863.peg.869
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229863.peg.1159
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229863.peg.2191
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229863.peg.1933
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229863.peg.435
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229863.peg.776
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229863.peg.283
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229863.peg.641
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229863.peg.584
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229863.peg.939
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229863.peg.1776
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoE	fig|6666666.229863.peg.1753
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.229863.peg.1944
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.229863.peg.2213
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229863.peg.833
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229863.peg.1567
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.229863.peg.930
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229863.peg.296
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229863.peg.778
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229863.peg.2521
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229863.peg.777
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229863.peg.2449
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229863.peg.207
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229863.peg.2124
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229863.peg.2563
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229863.peg.295
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229863.peg.1229
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229863.peg.2125
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229863.peg.2269
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229863.peg.472
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229863.peg.2472
Transport_of_Nickel_and_Cobalt	Additional component NikL of nickel ECF transporter	fig|6666666.229863.peg.2474
Transport_of_Nickel_and_Cobalt	Additional periplasmic component NikK of nickel ECF transporter	fig|6666666.229863.peg.2548
Transport_of_Nickel_and_Cobalt	Predicted cobalt ABC transporter periplasmic component	fig|6666666.229863.peg.2550
Transport_of_Nickel_and_Cobalt	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229863.peg.2473
Transport_of_Nickel_and_Cobalt	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229863.peg.2471
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229863.peg.606
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229863.peg.608
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229863.peg.1542
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229863.peg.1756
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229863.peg.1744
Trehalose_Uptake_and_Utilization	Trehalase (EC 3.2.1.28)	fig|6666666.229863.peg.884
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229863.peg.1483
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229863.peg.2459
Triacylglycerol_metabolism	Lysophospholipase L2 (EC 3.1.1.5)	fig|6666666.229863.peg.1497
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229863.peg.1483
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229863.peg.2459
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229863.peg.48
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229863.peg.444
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229863.peg.349
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229863.peg.446
Two-component_regulatory_systems_in_Campylobacter	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229863.peg.447
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.229863.peg.1834
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229863.peg.1485
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229863.peg.1885
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229863.peg.1488
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229863.peg.1884
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229863.peg.1486
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229863.peg.1887
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229863.peg.1888
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229863.peg.1891
Type_VI_secretion_systems	ClpB protein	fig|6666666.229863.peg.2287
Type_VI_secretion_systems	ClpB protein	fig|6666666.229863.peg.2573
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229863.peg.1009
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229863.peg.1751
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229863.peg.1231
USS-DB-7	ClpB protein	fig|6666666.229863.peg.2287
USS-DB-7	ClpB protein	fig|6666666.229863.peg.2573
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229863.peg.1549
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229863.peg.1761
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229863.peg.2048
Universal_GTPases	GTP-binding protein Era	fig|6666666.229863.peg.117
Universal_GTPases	GTP-binding protein HflX	fig|6666666.229863.peg.1881
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229863.peg.193
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229863.peg.2537
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229863.peg.2427
Universal_GTPases	Probable GTPase related to EngC	fig|6666666.229863.peg.1902
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229863.peg.487
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229863.peg.2566
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229863.peg.2519
Universal_GTPases	Translation elongation factor G	fig|6666666.229863.peg.833
Universal_GTPases	Translation elongation factor G	fig|6666666.229863.peg.1567
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229863.peg.119
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229863.peg.1104
Universal_GTPases	Translation initiation factor 2	fig|6666666.229863.peg.777
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229863.peg.1163
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229863.peg.1515
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229863.peg.328
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 4	fig|6666666.229863.peg.2122
Valine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.229863.peg.1261
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229863.peg.1907
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229863.peg.911
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229863.peg.1899
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229863.peg.2580
Yfa_cluster	Competence/damage-inducible protein CinA	fig|6666666.229863.peg.236
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229863.peg.468
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229863.peg.2110
YjeE	NAD(P)HX dehydratase	fig|6666666.229863.peg.561
YjeE	NAD(P)HX epimerase	fig|6666666.229863.peg.561
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229863.peg.468
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229863.peg.467
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229863.peg.49
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229863.peg.2029
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229863.peg.2528
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229863.peg.269
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229863.peg.2226
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229863.peg.257
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229863.peg.34
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229863.peg.942
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229863.peg.1446
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229863.peg.1454
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229863.peg.1645
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229863.peg.1692
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229863.peg.1694
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229863.peg.2078
cAMP_signaling_in_bacteria	Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase	fig|6666666.229863.peg.995
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.229863.peg.452
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229863.peg.722
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229863.peg.723
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229863.peg.724
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229863.peg.721
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229863.peg.2229
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229863.peg.798
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229863.peg.722
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229863.peg.723
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229863.peg.721
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229863.peg.44
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, putative	fig|6666666.229863.peg.528
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229863.peg.496
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229863.peg.495
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.1193
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.1742
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.2154
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229863.peg.2556
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229863.peg.2427
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229863.peg.1045
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.229863.peg.1261
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229863.peg.199
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229863.peg.934
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229863.peg.716
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229863.peg.264
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229863.peg.1188
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229863.peg.1002
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229863.peg.2353
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.229863.peg.1937
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229863.peg.85
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229863.peg.796
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229863.peg.2527
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229863.peg.1404
pyrimidine_conversions	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229863.peg.2416
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229863.peg.1128
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229863.peg.2023
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.229863.peg.2325
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229863.peg.843
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229863.peg.1773
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229863.peg.843
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229863.peg.1773
tRNA-dependent_amino_acid_transfers	tRNA-dependent lipid II--amino acid ligase	fig|6666666.229863.peg.202
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229863.peg.281
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229863.peg.906
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229863.peg.898
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229863.peg.351
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.229863.peg.1294
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.229863.peg.1295
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.229863.peg.1293
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229863.peg.1752
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229863.peg.1646
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.229863.peg.1294
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.229863.peg.1295
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.229863.peg.1293
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.229863.peg.1646
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229863.peg.1826
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229863.peg.494
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229863.peg.1962
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229863.peg.2275
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229863.peg.2068
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229863.peg.821
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229863.peg.1736
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229863.peg.89
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.229863.peg.2386
tRNA_aminoacylation,_Pro	tRNA proofreading protein STM4549	fig|6666666.229863.peg.2246
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229863.peg.2307
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229863.peg.793
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229863.peg.350
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229863.peg.1012
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229863.peg.567
tRNA_modification_Bacteria	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229863.peg.2003
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.1193
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.1742
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229863.peg.2154
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229863.peg.2556
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229863.peg.85
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229863.peg.393
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.229863.peg.583
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229863.peg.2427
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.229863.peg.1206
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.229863.peg.1205
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.229863.peg.1204
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229863.peg.2163
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229863.peg.2152
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229863.peg.2153
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229863.peg.988
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229863.peg.752
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229863.peg.1795
tRNA_modification_Bacteria	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229863.peg.2002
tRNA_modification_Bacteria	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229863.peg.2054
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229863.peg.1723
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229863.peg.1898
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229863.peg.489
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229863.peg.1788
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229863.peg.2338
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229863.peg.779
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229863.peg.1045
tRNA_modification_Bacteria	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229863.peg.1413
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229863.peg.589
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229863.peg.1430
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229863.peg.362
tRNA_modification_Bacteria	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229863.peg.2524
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229863.peg.849
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229863.peg.2218
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.229863.peg.67
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229863.peg.489
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229863.peg.1788
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229863.peg.2338
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229863.peg.779
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229863.peg.589
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229863.peg.362
tRNA_splicing	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229863.peg.1067
tRNAs	tRNA-Ala-CGC	fig|6666666.229863.rna.24
tRNAs	tRNA-Ala-GGC	fig|6666666.229863.rna.36
tRNAs	tRNA-Arg-GCG	fig|6666666.229863.rna.30
tRNAs	tRNA-Cys-GCA	fig|6666666.229863.rna.33
tRNAs	tRNA-Gly-GCC	fig|6666666.229863.rna.9
tRNAs	tRNA-Leu-CAA	fig|6666666.229863.rna.38
tRNAs	tRNA-Leu-CAG	fig|6666666.229863.rna.23
tRNAs	tRNA-Leu-GAG	fig|6666666.229863.rna.7
tRNAs	tRNA-Phe-GAA	fig|6666666.229863.rna.8
tRNAs	tRNA-Pro-CGG	fig|6666666.229863.rna.40
tRNAs	tRNA-Pro-GGG	fig|6666666.229863.rna.6
tRNAs	tRNA-Ser-GGA	fig|6666666.229863.rna.32
tRNAs	tRNA-Trp-CCA	fig|6666666.229863.rna.43
tRNAs	tRNA-Val-GAC	fig|6666666.229863.rna.5
