16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229864.peg.117
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229864.peg.6
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.229864.peg.4
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229864.peg.154
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229864.peg.5
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229864.peg.1374
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229864.peg.1095
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229864.peg.2149
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229864.peg.1215
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229864.peg.1238
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229864.peg.2368
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229864.peg.1181
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229864.peg.1210
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229864.peg.1467
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229864.peg.1175
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229864.peg.2557
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229864.peg.2558
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229864.peg.1049
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)	fig|6666666.229864.peg.2089
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)	fig|6666666.229864.peg.2087
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1)	fig|6666666.229864.peg.2088
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.229864.peg.158
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)	fig|6666666.229864.peg.753
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)	fig|6666666.229864.peg.755
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)	fig|6666666.229864.peg.756
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)	fig|6666666.229864.peg.757
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)	fig|6666666.229864.peg.758
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229864.peg.1016
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229864.peg.1565
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)	fig|6666666.229864.peg.2230
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229864.peg.1014
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229864.peg.1563
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229864.peg.79
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229864.peg.2142
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229864.peg.78
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229864.peg.449
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229864.peg.1013
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229864.peg.1132
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229864.peg.2224
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229864.peg.2225
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229864.peg.77
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229864.peg.1798
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229864.peg.2144
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229864.peg.2221
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229864.peg.76
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229864.peg.1566
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229864.peg.1797
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229864.peg.1976
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229864.peg.2145
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229864.peg.2220
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229864.peg.80
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229864.peg.1800
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229864.peg.2141
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229864.peg.2223
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229864.peg.2227
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229864.peg.1015
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229864.peg.1799
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229864.peg.2222
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229864.peg.140
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229864.peg.883
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229864.peg.882
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229864.peg.1102
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229864.peg.1269
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229864.peg.1629
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229864.peg.1269
Adhesion_of_Campylobacter	Fibronectin/fibrinogen-binding protein	fig|6666666.229864.peg.2320
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.229864.peg.56
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.229864.peg.57
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.229864.peg.1489
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.229864.peg.54
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.229864.peg.2249
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.852
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.1267
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.1841
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229864.peg.452
Alkanesulfonate_assimilation	ABC-type nitrate/sulfonate/bicarbonate transport system, permease component	fig|6666666.229864.peg.1384
Alkanesulfonate_assimilation	ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components	fig|6666666.229864.peg.1385
Allantoin_Utilization	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229864.peg.2155
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.118
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.228
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.620
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.873
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.928
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1262
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1381
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1525
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1689
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1919
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2135
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2361
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2499
Aminoglycoside_adenylyltransferases	Aminoglycoside N6'-acetyltransferase (EC 2.3.1.82)	fig|6666666.229864.peg.564
Aminopeptidases_(EC_3.4.11.-)	Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.24)	fig|6666666.229864.peg.730
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229864.peg.1470
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229864.peg.276
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229864.peg.860
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229864.peg.1765
Ammonia_assimilation	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229864.peg.1574
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.229864.peg.1492
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229864.peg.329
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229864.peg.329
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229864.peg.329
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229864.peg.2090
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229864.peg.2090
Arginine_Deiminase_Pathway	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229864.peg.1617
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229864.peg.870
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229864.peg.2090
Arginine_and_Ornithine_Degradation	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229864.peg.2264
Arginine_and_Ornithine_Degradation	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229864.peg.1617
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229864.peg.870
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229864.peg.2153
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229864.peg.2090
Arginine_and_Ornithine_Degradation	Ornithine cyclodeaminase (EC 4.3.1.12)	fig|6666666.229864.peg.1131
Arginine_and_Ornithine_Degradation	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229864.peg.2264
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229864.peg.1424
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229864.peg.1425
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229864.peg.2273
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229864.peg.257
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229864.peg.10
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229864.peg.131
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229864.peg.1636
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229864.peg.117
Bacterial_Cell_Division	Cell division protein FtsJ	fig|6666666.229864.peg.371
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229864.peg.997
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229864.peg.1347
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229864.peg.6
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229864.peg.9
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229864.peg.8
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229864.peg.307
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229864.peg.677
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229864.peg.11
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.229864.peg.4
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229864.peg.2408
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229864.peg.1769
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229864.peg.2556
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229864.peg.151
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229864.peg.152
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229864.peg.153
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.229864.peg.740
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229864.peg.442
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229864.peg.5
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229864.peg.257
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229864.peg.10
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229864.peg.117
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229864.peg.997
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229864.peg.1347
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229864.peg.6
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229864.peg.9
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229864.peg.8
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229864.peg.11
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.229864.peg.4
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229864.peg.1769
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229864.peg.588
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229864.peg.1768
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229864.peg.151
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229864.peg.152
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229864.peg.153
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229864.peg.155
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.229864.peg.740
Bacterial_Cytoskeleton	Sporulation initiation inhibitor protein Soj	fig|6666666.229864.peg.1769
Bacterial_Cytoskeleton	Stage 0 sporulation protein J	fig|6666666.229864.peg.1768
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229864.peg.997
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229864.peg.1347
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229864.peg.240
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229864.peg.2384
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229864.peg.2195
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1252
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1465
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1483
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229864.peg.264
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229864.peg.897
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.229864.peg.2131
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229864.peg.154
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.229864.peg.151
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.229864.peg.152
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.229864.peg.153
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.229864.peg.155
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.229864.peg.740
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.229864.peg.2568
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.229864.peg.2568
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229864.peg.2026
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229864.peg.1150
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229864.peg.2567
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229864.peg.475
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229864.peg.1292
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229864.peg.2422
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229864.peg.442
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229864.peg.489
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229864.peg.838
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.229864.peg.495
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily I	fig|6666666.229864.peg.333
Bile_hydrolysis	Choloylglycine hydrolase (EC 3.5.1.24)	fig|6666666.229864.peg.1665
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.229864.peg.1064
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229864.peg.115
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229864.peg.2387
Biotin_biosynthesis	Biotin operon repressor	fig|6666666.229864.peg.1205
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229864.peg.1205
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229864.peg.2101
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229864.peg.2478
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229864.peg.2388
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229864.peg.2386
Biotin_biosynthesis	predicted biotin regulatory protein BioR (GntR family)	fig|6666666.229864.peg.1297
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229864.peg.2130
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229864.peg.1017
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229864.peg.2189
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229864.peg.2527
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229864.peg.273
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229864.peg.2259
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229864.peg.2260
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229864.peg.2258
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229864.peg.471
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229864.peg.2484
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229864.peg.2488
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229864.peg.2486
CBSS-176299.4.peg.1996A	Endoribonuclease L-PSP	fig|6666666.229864.peg.468
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229864.peg.1964
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229864.peg.2115
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229864.peg.1844
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229864.peg.1843
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229864.peg.1842
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229864.peg.843
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229864.peg.1603
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229864.peg.883
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229864.peg.882
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229864.peg.124
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229864.peg.126
CBSS-224911.1.peg.435	Carboxyl-terminal protease (EC 3.4.21.102)	fig|6666666.229864.peg.2541
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229864.peg.2167
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229864.peg.1760
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229864.peg.2094
CBSS-258594.1.peg.3339	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.229864.peg.280
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229864.peg.2545
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229864.peg.175
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229864.peg.2545
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229864.peg.175
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229864.peg.16
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229864.peg.14
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229864.peg.15
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229864.peg.1248
CBSS-292415.3.peg.2341	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229864.peg.792
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229864.peg.235
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229864.peg.2490
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229864.peg.237
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229864.peg.2470
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229864.peg.739
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229864.peg.738
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229864.peg.485
CBSS-314276.3.peg.1499	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229864.peg.1004
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229864.peg.2038
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.229864.peg.2036
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.229864.peg.2037
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.229864.peg.2365
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229864.peg.1411
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229864.peg.1909
CBSS-316057.3.peg.1308	RNA polymerase sigma-54 factor RpoN	fig|6666666.229864.peg.793
CBSS-316273.3.peg.227	Alpha-2-macroglobulin	fig|6666666.229864.peg.540
CBSS-316273.3.peg.227	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229864.peg.546
CBSS-316407.3.peg.2816	Protein of unknown function DUF541	fig|6666666.229864.peg.2324
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229864.peg.1269
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229864.peg.1269
CBSS-323098.3.peg.2823	Flagellar motor rotation protein MotB	fig|6666666.229864.peg.1141
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229864.peg.701
CBSS-326442.4.peg.1852	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229864.peg.1620
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229864.peg.45
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229864.peg.43
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229864.peg.792
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229864.peg.552
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229864.peg.955
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229864.peg.1172
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229864.peg.644
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229864.peg.147
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229864.peg.148
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229864.peg.1233
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229864.peg.2096
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229864.peg.152
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229864.peg.153
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.229864.peg.740
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229864.peg.96
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229864.peg.112
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229864.peg.1001
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229864.peg.727
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229864.peg.2359
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229864.peg.330
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229864.peg.1389
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.852
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.1267
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.1841
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229864.peg.345
CBSS-393130.3.peg.794	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229864.peg.953
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229864.peg.984
CBSS-469378.4.peg.430	FIG002344: Hydrolase (HAD superfamily)	fig|6666666.229864.peg.1409
CBSS-469378.4.peg.430	RecA protein	fig|6666666.229864.peg.2035
CBSS-521098.4.peg.1460	FIG001614: Membrane protein	fig|6666666.229864.peg.1350
CBSS-521098.4.peg.1460	FIG015373: Membrane protein	fig|6666666.229864.peg.1351
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229864.peg.49
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229864.peg.1490
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229864.peg.1491
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.229864.peg.47
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229864.peg.48
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229864.peg.46
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229864.peg.46
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229864.peg.706
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229864.peg.734
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229864.peg.70
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229864.peg.117
CBSS-83331.1.peg.3039	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229864.peg.733
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229864.peg.154
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229864.peg.736
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.852
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.1267
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.1841
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229864.peg.1794
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229864.peg.2137
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229864.peg.2366
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229864.peg.276
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229864.peg.2383
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229864.peg.2384
CMP-N-acetylneuraminate_Biosynthesis	N-acetylneuraminate synthase (EC 2.5.1.56)	fig|6666666.229864.peg.2118
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229864.peg.1498
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229864.peg.1499
CRISPRs	CRISPR-associated protein, Csn1 family	fig|6666666.229864.peg.1497
CRISPRs	CRISPR-associated protein, Csn2 family	fig|6666666.229864.peg.1500
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229864.peg.1071
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229864.peg.232
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229864.peg.786
Cadmium_resistance	Cadmium efflux system accessory protein	fig|6666666.229864.peg.181
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229864.peg.1509
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229864.peg.282
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229864.peg.2450
Calvin-Benson_cycle	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229864.peg.2380
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229864.peg.1521
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229864.peg.982
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.229864.peg.111
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229864.peg.43
Carbon_Starvation	Carbon starvation protein A	fig|6666666.229864.peg.1174
Carbon_Starvation	Carbon storage regulator	fig|6666666.229864.peg.747
Carbon_storage_regulator	Carbon storage regulator	fig|6666666.229864.peg.747
Carbon_storage_regulator	Flagellar assembly factor FliW	fig|6666666.229864.peg.746
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229864.peg.329
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229864.peg.329
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229864.peg.1162
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229864.peg.1769
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229864.peg.588
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229864.peg.1768
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229864.peg.1466
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229864.peg.1163
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229864.peg.1403
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229864.peg.1402
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229864.peg.581
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229864.peg.232
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229864.peg.786
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229864.peg.789
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229864.peg.787
Cell_Division_Subsystem_including_YidCD	RNA-binding protein Jag	fig|6666666.229864.peg.785
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229864.peg.788
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229864.peg.905
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229864.peg.1990
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229864.peg.257
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229864.peg.131
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229864.peg.1636
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229864.peg.337
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229864.peg.1805
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229864.peg.481
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229864.peg.2167
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229864.peg.91
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229864.peg.143
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily S (as in PMID19099556)	fig|6666666.229864.peg.2482
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229864.peg.30
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229864.peg.1186
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229864.peg.1506
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229864.peg.954
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229864.peg.2378
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229864.peg.2379
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229864.peg.1268
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229864.peg.2423
Chorismate_Synthesis	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229864.peg.296
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229864.peg.2287
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229864.peg.2378
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229864.peg.2379
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229864.peg.838
Citrate_Metabolism,_Transport,_and_Regulation	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25)	fig|6666666.229864.peg.316
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase alpha chain (EC 4.1.3.6)	fig|6666666.229864.peg.2370
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.229864.peg.2371
Citrate_Metabolism,_Transport,_and_Regulation	[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	fig|6666666.229864.peg.315
ClpAS_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229864.peg.528
ClpAS_cluster	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229864.peg.527
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229864.peg.2397
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229864.peg.335
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229864.peg.2378
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229864.peg.2379
CoA_disulfide_thiol-disulfide_redox_system	CoA-disulfide reductase (EC 1.8.1.14)	fig|6666666.229864.peg.1328
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.229864.peg.774
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.229864.peg.781
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229864.peg.776
Cobalamin_synthesis	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	fig|6666666.229864.peg.1383
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229864.peg.1776
Cobalamin_synthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.229864.peg.775
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.229864.peg.1040
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.229864.peg.1784
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.229864.peg.1775
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.229864.peg.2336
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.229864.peg.1785
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.229864.peg.941
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.229864.peg.718
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.229864.peg.1041
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.229864.peg.1068
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.229864.peg.2043
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.229864.peg.1039
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229864.peg.1795
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229864.peg.678
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229864.peg.1247
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.229864.peg.1522
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229864.peg.2377
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229864.peg.175
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.229864.peg.774
Coenzyme_B12_biosynthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.229864.peg.781
Coenzyme_B12_biosynthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229864.peg.776
Coenzyme_B12_biosynthesis	ChlD component of cobalt chelatase involved in B12 biosynthesis	fig|6666666.229864.peg.1420
Coenzyme_B12_biosynthesis	ChlD component of cobalt chelatase involved in B12 biosynthesis	fig|6666666.229864.peg.1917
Coenzyme_B12_biosynthesis	ChlI component of cobalt chelatase involved in B12 biosynthesis	fig|6666666.229864.peg.1420
Coenzyme_B12_biosynthesis	ChlI component of cobalt chelatase involved in B12 biosynthesis	fig|6666666.229864.peg.1917
Coenzyme_B12_biosynthesis	ChlI component of cobalt chelatase involved in B12 biosynthesis	fig|6666666.229864.peg.1918
Coenzyme_B12_biosynthesis	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	fig|6666666.229864.peg.1383
Coenzyme_B12_biosynthesis	CobN component of cobalt chelatase involved in B12 biosynthesis	fig|6666666.229864.peg.1916
Coenzyme_B12_biosynthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229864.peg.1776
Coenzyme_B12_biosynthesis	Cobalamin synthase (EC 2.7.8.26)	fig|6666666.229864.peg.775
Coenzyme_B12_biosynthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.229864.peg.1040
Coenzyme_B12_biosynthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.229864.peg.1784
Coenzyme_B12_biosynthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.229864.peg.1775
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.229864.peg.2336
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.229864.peg.1785
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)	fig|6666666.229864.peg.766
Coenzyme_B12_biosynthesis	Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)	fig|6666666.229864.peg.765
Coenzyme_B12_biosynthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.229864.peg.941
Coenzyme_B12_biosynthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.229864.peg.718
Coenzyme_B12_biosynthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.229864.peg.1041
Coenzyme_B12_biosynthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.229864.peg.1068
Coenzyme_B12_biosynthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.229864.peg.2043
Coenzyme_B12_biosynthesis	Predicted cobalt ABC transporter periplasmic component	fig|6666666.229864.peg.458
Coenzyme_B12_biosynthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.229864.peg.1039
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, ATPase component BtuD	fig|6666666.229864.peg.633
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, ATPase component BtuD	fig|6666666.229864.peg.1542
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, ATPase component BtuD	fig|6666666.229864.peg.1913
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, ATPase component BtuD	fig|6666666.229864.peg.1923
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, ATPase component BtuD	fig|6666666.229864.peg.2292
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.229864.peg.635
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.229864.peg.1915
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, B12-binding component BtuF	fig|6666666.229864.peg.1925
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229864.peg.634
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229864.peg.1914
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229864.peg.1924
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229864.peg.799
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229864.peg.2406
Colicin_V_and_Bacteriocin_Production_Cluster	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229864.peg.1752
Colicin_V_and_Bacteriocin_Production_Cluster	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229864.peg.796
Colicin_V_and_Bacteriocin_Production_Cluster	Colicin V production protein	fig|6666666.229864.peg.376
Colicin_V_and_Bacteriocin_Production_Cluster	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229864.peg.2238
Colicin_V_and_Bacteriocin_Production_Cluster	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229864.peg.2238
Colicin_V_and_Bacteriocin_Production_Cluster	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229864.peg.670
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229864.peg.954
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229864.peg.2378
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229864.peg.2379
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229864.peg.1268
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229864.peg.2423
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229864.peg.2287
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229864.peg.2378
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229864.peg.2379
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229864.peg.838
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229864.peg.16
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229864.peg.884
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229864.peg.2383
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229864.peg.2384
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229864.peg.1305
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229864.peg.474
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229864.peg.982
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229864.peg.14
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229864.peg.15
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Serine/threonine protein kinase PrkC, regulator of stationary phase	fig|6666666.229864.peg.2382
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1252
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1465
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1483
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229864.peg.264
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229864.peg.897
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229864.peg.1257
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229864.peg.923
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229864.peg.182
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229864.peg.1169
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229864.peg.182
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229864.peg.1169
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.229864.peg.642
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229864.peg.49
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229864.peg.1490
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229864.peg.1491
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229864.peg.1332
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229864.peg.1332
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229864.peg.2155
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	D-glycerate transporter (predicted)	fig|6666666.229864.peg.1380
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.118
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.228
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.620
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.873
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.928
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1262
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1381
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1525
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1689
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1919
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2135
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2361
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2499
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229864.peg.2155
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	D-glycerate transporter (predicted)	fig|6666666.229864.peg.1380
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.118
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.228
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.620
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.873
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.928
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1262
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1381
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1525
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1689
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1919
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2135
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2361
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2499
D-gluconate_and_ketogluconates_metabolism	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229864.peg.1332
D-ribose_utilization	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229864.peg.2380
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229864.peg.1521
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229864.peg.330
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229864.peg.2376
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229864.peg.923
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229864.peg.591
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229864.peg.1466
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229864.peg.1163
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229864.peg.971
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229864.peg.972
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.229864.peg.1306
DNA_processing_cluster	Protein involved in catabolism of external DNA	fig|6666666.229864.peg.1463
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229864.peg.1307
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229864.peg.2165
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229864.peg.170
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229864.peg.872
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229864.peg.2121
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229864.peg.908
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229864.peg.2131
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229864.peg.104
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229864.peg.1472
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229864.peg.1672
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229864.peg.1825
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229864.peg.1903
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229864.peg.2315
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.229864.peg.2471
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229864.peg.2173
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229864.peg.465
DNA_repair,_bacterial	Exonuclease SbcC	fig|6666666.229864.peg.1345
DNA_repair,_bacterial	Exonuclease SbcD	fig|6666666.229864.peg.1344
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229864.peg.2351
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229864.peg.1389
DNA_repair,_bacterial	RecA protein	fig|6666666.229864.peg.2035
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229864.peg.1846
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229864.peg.2414
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229864.peg.391
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229864.peg.466
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229864.peg.988
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229864.peg.990
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.229864.peg.246
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229864.peg.1496
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.229864.peg.1600
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229864.peg.1402
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229864.peg.1601
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.229864.peg.2035
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229864.peg.1307
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229864.peg.1846
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229864.peg.2414
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229864.peg.591
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.229864.peg.2035
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase Rep	fig|6666666.229864.peg.2066
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229864.peg.727
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229864.peg.2359
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229864.peg.988
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229864.peg.990
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.229864.peg.2035
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229864.peg.1305
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229864.peg.1162
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229864.peg.1466
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229864.peg.1163
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229864.peg.1403
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229864.peg.1402
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.229864.peg.290
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.229864.peg.2444
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229864.peg.16
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229864.peg.1466
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229864.peg.1163
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229864.peg.519
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229864.peg.644
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229864.peg.293
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229864.peg.796
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.229864.peg.2557
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.229864.peg.72
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.229864.peg.1849
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.229864.peg.1848
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229864.peg.2557
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.229864.peg.71
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.229864.peg.202
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.229864.peg.83
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229864.peg.2558
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229864.peg.1102
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.229864.peg.1293
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.229864.peg.1293
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.229864.peg.507
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.229864.peg.2140
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.229864.peg.2140
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229864.peg.2156
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229864.peg.510
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229864.peg.511
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229864.peg.650
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229864.peg.1614
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229864.peg.1629
Deoxyribose_and_Deoxynucleoside_Catabolism	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229864.peg.592
Dihydroxyacetone_kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), ADP-binding subunit	fig|6666666.229864.peg.751
Dihydroxyacetone_kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), dihydroxyacetone binding subunit	fig|6666666.229864.peg.752
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229864.peg.629
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229864.peg.115
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229864.peg.2387
ECF_class_transporters	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229864.peg.536
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.562
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.1007
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.1416
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.1429
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.1454
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.2063
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.2069
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.2339
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.2343
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229864.peg.563
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229864.peg.1009
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229864.peg.1414
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229864.peg.1431
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229864.peg.1456
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229864.peg.2061
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229864.peg.2070
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229864.peg.2337
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229864.peg.2345
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229864.peg.2388
ECF_class_transporters	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229864.peg.535
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.560
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.561
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.851
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.1008
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.1415
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.1430
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.1455
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.2062
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.2068
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.2338
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229864.peg.2344
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229864.peg.2386
ECF_class_transporters	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229864.peg.537
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229864.peg.1332
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229864.peg.1332
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229864.peg.2107
Entner-Doudoroff_Pathway	Hexokinase (EC 2.7.1.1)	fig|6666666.229864.peg.862
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229864.peg.282
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229864.peg.2450
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229864.peg.992
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229864.peg.2434
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229864.peg.924
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229864.peg.2094
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229864.peg.1206
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.229864.peg.218
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229864.peg.1985
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229864.peg.1760
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.229864.peg.1764
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.229864.peg.1751
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229864.peg.1752
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.229864.peg.2182
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229864.peg.1754
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229864.peg.1753
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.229864.peg.2566
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.229864.peg.1763
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229864.peg.2094
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229864.peg.1520
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229864.peg.1206
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229864.peg.2094
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229864.peg.1215
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229864.peg.1238
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.229864.peg.2154
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229864.peg.1520
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229864.peg.1206
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229864.peg.288
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229864.peg.373
Flagellar_motility	Flagellar basal-body rod modification protein FlgD	fig|6666666.229864.peg.1145
Flagellar_motility	Flagellar biosynthesis protein FlhA	fig|6666666.229864.peg.1219
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229864.peg.695
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229864.peg.1218
Flagellar_motility	Flagellar biosynthesis protein FlhF	fig|6666666.229864.peg.1067
Flagellar_motility	Flagellar biosynthesis protein FliR	fig|6666666.229864.peg.1217
Flagellar_motility	Flagellar motor rotation protein MotA	fig|6666666.229864.peg.1142
Flagellar_motility	Flagellar motor rotation protein MotB	fig|6666666.229864.peg.1141
Flagellar_motility	Flagellar motor switch protein FliM	fig|6666666.229864.peg.1139
Flagellar_motility	Flagellar motor switch protein FliN	fig|6666666.229864.peg.1138
Flagellar_motility	Flagellar synthesis regulator FleN	fig|6666666.229864.peg.1066
Flagellar_motility	Flagellum-specific ATP synthase FliI	fig|6666666.229864.peg.26
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.229864.peg.793
Flagellar_motility	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229864.peg.285
Flagellum	Flagellar M-ring protein FliF	fig|6666666.229864.peg.23
Flagellum	Flagellar assembly protein FliH	fig|6666666.229864.peg.25
Flagellum	Flagellar basal-body rod modification protein FlgD	fig|6666666.229864.peg.1145
Flagellum	Flagellar basal-body rod protein FlgB	fig|6666666.229864.peg.20
Flagellum	Flagellar basal-body rod protein FlgC	fig|6666666.229864.peg.21
Flagellum	Flagellar basal-body rod protein FlgF	fig|6666666.229864.peg.2161
Flagellum	Flagellar basal-body rod protein FlgG	fig|6666666.229864.peg.2162
Flagellum	Flagellar biosynthesis protein FlhA	fig|6666666.229864.peg.1219
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229864.peg.695
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229864.peg.1218
Flagellum	Flagellar biosynthesis protein FlhF	fig|6666666.229864.peg.1067
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229864.peg.713
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229864.peg.1140
Flagellum	Flagellar biosynthesis protein FliP	fig|6666666.229864.peg.1136
Flagellum	Flagellar biosynthesis protein FliQ	fig|6666666.229864.peg.1216
Flagellum	Flagellar biosynthesis protein FliR	fig|6666666.229864.peg.1217
Flagellum	Flagellar biosynthesis protein FliS	fig|6666666.229864.peg.1283
Flagellum	Flagellar biosynthesis protein FliZ	fig|6666666.229864.peg.1137
Flagellum	Flagellar hook protein FlgE	fig|6666666.229864.peg.1144
Flagellum	Flagellar hook-associated protein FlgK	fig|6666666.229864.peg.744
Flagellum	Flagellar hook-associated protein FlgL	fig|6666666.229864.peg.745
Flagellum	Flagellar hook-associated protein FliD	fig|6666666.229864.peg.268
Flagellum	Flagellar hook-basal body complex protein FliE	fig|6666666.229864.peg.22
Flagellum	Flagellar hook-length control protein FliK	fig|6666666.229864.peg.1146
Flagellum	Flagellar motor rotation protein MotA	fig|6666666.229864.peg.1142
Flagellum	Flagellar motor rotation protein MotB	fig|6666666.229864.peg.1141
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229864.peg.24
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229864.peg.89
Flagellum	Flagellar motor switch protein FliM	fig|6666666.229864.peg.1139
Flagellum	Flagellar motor switch protein FliN	fig|6666666.229864.peg.1138
Flagellum	Flagellar protein FlbB	fig|6666666.229864.peg.136
Flagellum	Flagellar protein FlbD	fig|6666666.229864.peg.1143
Flagellum	Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)	fig|6666666.229864.peg.2163
Flagellum	Flagellar protein FliJ	fig|6666666.229864.peg.27
Flagellum	Flagellar synthesis regulator FleN	fig|6666666.229864.peg.1066
Flagellum	Flagellin protein FlaA	fig|6666666.229864.peg.270
Flagellum	Flagellin protein FlaA	fig|6666666.229864.peg.271
Flagellum	Flagellin protein FlaA	fig|6666666.229864.peg.2159
Flagellum	Flagellin protein FlaG	fig|6666666.229864.peg.269
Flagellum	Flagellum-specific ATP synthase FliI	fig|6666666.229864.peg.26
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229864.peg.148
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229864.peg.1233
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229864.peg.2096
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.229864.peg.793
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229864.peg.117
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgB	fig|6666666.229864.peg.20
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgC	fig|6666666.229864.peg.21
Flagellum_in_Campylobacter	Flagellar hook-basal body complex protein FliE	fig|6666666.229864.peg.22
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229864.peg.270
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229864.peg.271
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229864.peg.2159
Flavodoxin	Flavodoxin	fig|6666666.229864.peg.1337
Flavodoxin	Flavodoxin	fig|6666666.229864.peg.1435
Flavodoxin	Flavodoxin	fig|6666666.229864.peg.2291
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229864.peg.2149
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229864.peg.2238
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229864.peg.2238
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229864.peg.1609
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.229864.peg.1481
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229864.peg.131
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229864.peg.1636
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229864.peg.337
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229864.peg.143
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229864.peg.571
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229864.peg.2335
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229864.peg.249
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229864.peg.1249
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229864.peg.2582
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229864.peg.570
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229864.peg.569
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229864.peg.2453
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229864.peg.2453
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229864.peg.249
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229864.peg.2466
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229864.peg.2546
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.229864.peg.1637
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229864.peg.2153
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229864.peg.2153
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229864.peg.799
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229864.peg.2406
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229864.peg.394
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229864.peg.244
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229864.peg.860
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229864.peg.1765
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229864.peg.1574
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229864.peg.2153
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229864.peg.2153
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229864.peg.792
Glutathione:_Redox_cycle	Glutathione peroxidase (EC 1.11.1.9)	fig|6666666.229864.peg.2465
Glycerate_metabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229864.peg.2155
Glycerate_metabolism	D-glycerate transporter (predicted)	fig|6666666.229864.peg.1380
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.118
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.228
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.620
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.873
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.928
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1262
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1381
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1525
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1689
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1919
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2135
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2361
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2499
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229864.peg.924
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229864.peg.2574
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229864.peg.2575
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.229864.peg.476
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.229864.peg.477
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229864.peg.1027
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229864.peg.1298
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229864.peg.490
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229864.peg.1964
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229864.peg.2115
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	NADH peroxidase (EC 1.11.1.1)	fig|6666666.229864.peg.1260
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Probable glycerol transport protein	fig|6666666.229864.peg.1963
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229864.peg.2182
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229864.peg.1215
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229864.peg.1238
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229864.peg.904
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229864.peg.167
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229864.peg.957
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229864.peg.1050
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.118
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.228
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.620
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.873
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.928
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1262
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1381
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1525
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1689
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1919
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2135
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2361
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2499
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229864.peg.2574
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229864.peg.2575
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229864.peg.1027
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229864.peg.1298
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229864.peg.490
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229864.peg.735
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229864.peg.595
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229864.peg.790
Glycine_Biosynthesis	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.229864.peg.1166
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229864.peg.1049
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229864.peg.595
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229864.peg.2366
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229864.peg.2356
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.118
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.228
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.620
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.873
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.928
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1262
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1381
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1525
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1689
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1919
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2135
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2361
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2499
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.229864.peg.2365
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229864.peg.2364
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229864.peg.2363
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229864.peg.300
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229864.peg.301
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229864.peg.379
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229864.peg.1049
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229864.peg.701
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229864.peg.2366
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229864.peg.2368
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.229864.peg.2365
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229864.peg.2364
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229864.peg.2363
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B alpha subunit (EC 1.21.4.4)	fig|6666666.229864.peg.1240
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229864.peg.1241
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229864.peg.1242
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229864.peg.1243
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B alpha subunit (EC 1.21.4.2)	fig|6666666.229864.peg.523
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B beta subunit (EC 1.21.4.2)	fig|6666666.229864.peg.523
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229864.peg.520
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229864.peg.521
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229864.peg.522
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 1	fig|6666666.229864.peg.1413
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 2	fig|6666666.229864.peg.1412
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229864.peg.1910
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229864.peg.1911
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229864.peg.1912
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229864.peg.1411
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229864.peg.1909
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229864.peg.1908
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229864.peg.779
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229864.peg.434
Glycogen_metabolism	Glycogen branching enzyme, GH-57-type, archaeal (EC 2.4.1.18)	fig|6666666.229864.peg.2248
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229864.peg.1265
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229864.peg.800
Glycogen_metabolism	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229864.peg.2323
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229864.peg.1095
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229864.peg.2107
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229864.peg.1509
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229864.peg.958
Glycolysis_and_Gluconeogenesis	Hexokinase (EC 2.7.1.1)	fig|6666666.229864.peg.862
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229864.peg.282
Glycolysis_and_Gluconeogenesis	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229864.peg.1518
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229864.peg.2450
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229864.peg.992
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229864.peg.2434
Glycolysis_and_Gluconeogenesis	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit (EC 2.7.1.90)	fig|6666666.229864.peg.1227
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.229864.peg.1308
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.229864.peg.1309
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229864.peg.924
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229864.peg.295
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229864.peg.2006
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229864.peg.43
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229864.peg.1601
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229864.peg.2556
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229864.peg.1182
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229864.peg.49
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229864.peg.1490
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229864.peg.1491
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229864.peg.48
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229864.peg.46
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229864.peg.486
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229864.peg.1790
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229864.peg.1789
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229864.peg.2289
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229864.peg.2095
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229864.peg.1788
Group_II_intron-associated_genes	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	fig|6666666.229864.peg.663
HPr_catabolite_repression_system	Catabolite repression HPr-like protein Crh	fig|6666666.229864.peg.97
HPr_catabolite_repression_system	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229864.peg.98
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229864.peg.486
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229864.peg.1790
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229864.peg.1789
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229864.peg.1788
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.229864.peg.262
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.229864.peg.2290
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229864.peg.667
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229864.peg.2540
Heat_shock_dnaK_gene_cluster_extended	Signal peptidase-like protein	fig|6666666.229864.peg.1277
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229864.peg.2554
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229864.peg.1374
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229864.peg.2549
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229864.peg.260
Hfl_operon	GTP-binding protein HflX	fig|6666666.229864.peg.1127
Hfl_operon	HflC protein	fig|6666666.229864.peg.135
Hfl_operon	HflK protein	fig|6666666.229864.peg.134
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229864.peg.1467
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.229864.peg.1750
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.229864.peg.1211
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.229864.peg.993
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229864.peg.2196
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229864.peg.667
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229864.peg.1253
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229864.peg.1482
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1252
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1465
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1483
Hypothetical_protein_HNE_2485	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229864.peg.939
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229864.peg.520
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229864.peg.522
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229864.peg.853
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229864.peg.1241
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229864.peg.1243
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229864.peg.1910
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229864.peg.1912
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.229864.peg.2472
Integrons	Integron integrase IntIPac	fig|6666666.229864.peg.2514
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229864.peg.1160
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229864.peg.16
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229864.peg.46
Inteins	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229864.peg.1518
Inteins	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229864.peg.1969
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229864.peg.133
Inteins	Translation initiation factor 2	fig|6666666.229864.peg.2260
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, ATP-binding subunit	fig|6666666.229864.peg.309
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, permease protein 2	fig|6666666.229864.peg.308
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, substrate binding protein	fig|6666666.229864.peg.306
Iron_transport_system_including_ABC_transporter	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229864.peg.304
Iron_transport_system_including_ABC_transporter	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229864.peg.305
Isoleucine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.229864.peg.1772
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229864.peg.329
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229864.peg.734
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229864.peg.2569
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229864.peg.70
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229864.peg.686
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229864.peg.685
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229864.peg.140
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229864.peg.2250
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229864.peg.329
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229864.peg.736
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229864.peg.329
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229864.peg.329
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229864.peg.329
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229864.peg.329
Isoprenoinds_for_Quinones	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229864.peg.2583
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229864.peg.328
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229864.peg.736
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229864.peg.2046
KH_domain_RNA_binding_protein_YlqC	KH domain RNA binding protein YlqC	fig|6666666.229864.peg.2045
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229864.peg.2044
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.229864.peg.1646
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229864.peg.812
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229864.peg.814
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229864.peg.813
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229864.peg.811
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229864.peg.816
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229864.peg.815
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229864.peg.1875
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229864.peg.235
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229864.peg.2490
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229864.peg.159
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229864.peg.249
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229864.peg.2466
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229864.peg.2546
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229864.peg.614
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229864.peg.692
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229864.peg.1621
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229864.peg.618
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	fig|6666666.229864.peg.617
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229864.peg.235
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229864.peg.2490
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229864.peg.2466
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229864.peg.2546
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229864.peg.2368
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-)	fig|6666666.229864.peg.1889
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229864.peg.2316
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229864.peg.1031
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229864.peg.1310
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229864.peg.693
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229864.peg.2443
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229864.peg.1001
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229864.peg.196
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229864.peg.1192
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229864.peg.439
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229864.peg.440
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229864.peg.438
LysR-family_proteins_in_Escherichia_coli	Chromosome initiation inhibitor	fig|6666666.229864.peg.1569
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229864.peg.1322
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229864.peg.1816
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.229864.peg.1232
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229864.peg.147
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229864.peg.148
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229864.peg.1233
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229864.peg.2096
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229864.peg.867
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229864.peg.897
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229864.peg.49
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229864.peg.1490
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229864.peg.1491
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229864.peg.2188
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229864.peg.2025
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.229864.peg.1097
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229864.peg.779
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229864.peg.159
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229864.peg.800
Maltose_and_Maltodextrin_Utilization	Oligo-1,6-glucosidase (EC 3.2.1.10)	fig|6666666.229864.peg.1271
Mannitol_Utilization	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229864.peg.98
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229864.peg.1249
MazEF_toxin-antitoxing_(programmed_cell_death)_system	Programmed cell death antitoxin YdcD	fig|6666666.229864.peg.948
MazEF_toxin-antitoxing_(programmed_cell_death)_system	Programmed cell death toxin YdcE	fig|6666666.229864.peg.949
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229864.peg.1794
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229864.peg.2137
Methanogenesis_strays	Ni2+-binding GTPase involved in regulation of expression and maturation of hydrogenase	fig|6666666.229864.peg.1642
Methanogenesis_strays	Uncharacterized ABC transporter ATP-binding protein MJ0121	fig|6666666.229864.peg.1641
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229864.peg.1853
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.229864.peg.599
Methionine_Degradation	Methionine transporter MetT	fig|6666666.229864.peg.603
Methionine_Degradation	Methionine transporter MetT	fig|6666666.229864.peg.604
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229864.peg.598
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229864.peg.1827
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229864.peg.1269
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229864.peg.863
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229864.peg.1269
Methionine_Salvage	5-methylthioribose kinase (EC 2.7.1.100)	fig|6666666.229864.peg.1851
Methionine_Salvage	Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)	fig|6666666.229864.peg.2404
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229864.peg.904
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229864.peg.904
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229864.peg.792
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229864.peg.996
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229864.peg.2317
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229864.peg.2549
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32)	fig|6666666.229864.peg.313
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32)	fig|6666666.229864.peg.314
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.1464
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.1502
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.1519
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.1782
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.1975
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.2092
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.2209
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229864.peg.869
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229864.peg.1089
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229864.peg.1794
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229864.peg.2137
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229864.peg.552
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229864.peg.1654
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229864.peg.2449
Murein_Hydrolases	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	fig|6666666.229864.peg.674
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229864.peg.810
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229864.peg.809
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229864.peg.232
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229864.peg.786
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Protein YidD	fig|6666666.229864.peg.787
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	RNA-binding protein Jag	fig|6666666.229864.peg.785
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.229864.peg.557
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.229864.peg.558
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.229864.peg.559
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229864.peg.2201
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229864.peg.2202
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229864.peg.1457
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229864.peg.2203
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229864.peg.1932
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229864.peg.30
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229864.peg.1186
N-linked_Glycosylation_in_Bacteria	Phospholipid-lipopolysaccharide ABC transporter	fig|6666666.229864.peg.820
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229864.peg.235
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229864.peg.2490
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229864.peg.1172
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.229864.peg.197
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229864.peg.2332
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.229864.peg.197
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229864.peg.1348
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.229864.peg.2483
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229864.peg.2555
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.229864.peg.187
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229864.peg.188
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229864.peg.2000
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229864.peg.1999
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229864.peg.1998
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229864.peg.1997
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229864.peg.1996
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Sodium-dependent phosphate transporter	fig|6666666.229864.peg.367
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229864.peg.570
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229864.peg.569
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.229864.peg.1644
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.229864.peg.1645
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229864.peg.734
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229864.peg.2569
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229864.peg.70
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229864.peg.686
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229864.peg.685
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229864.peg.140
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229864.peg.2250
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229864.peg.680
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229864.peg.1172
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229864.peg.2196
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.229864.peg.1469
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229864.peg.2262
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229864.peg.2259
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229864.peg.2261
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229864.peg.2260
Omega_peptidases_(EC_3.4.19.-)	Acylamino-acid-releasing enzyme (EC 3.4.19.1)	fig|6666666.229864.peg.1264
Omega_peptidases_(EC_3.4.19.-)	Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	fig|6666666.229864.peg.1349
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229864.peg.2149
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229864.peg.1181
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229864.peg.1210
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229864.peg.1175
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229864.peg.1175
Oxidative_stress	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229864.peg.1173
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.229864.peg.2570
Oxidative_stress	Rubrerythrin	fig|6666666.229864.peg.1599
Oxidative_stress	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229864.peg.2491
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.229864.peg.1002
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229864.peg.2380
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229864.peg.1521
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229864.peg.1102
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229864.peg.982
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.229864.peg.111
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229864.peg.1871
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229864.peg.1871
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229864.peg.117
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229864.peg.777
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229864.peg.1794
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229864.peg.2137
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229864.peg.244
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229864.peg.2477
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229864.peg.154
Peptidoglycan_Biosynthesis	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229864.peg.546
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.229864.peg.648
Peptidoglycan_Biosynthesis	Rare lipoprotein A precursor	fig|6666666.229864.peg.427
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.229864.peg.155
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229864.peg.1258
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229864.peg.1802
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229864.peg.377
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229864.peg.2239
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229864.peg.1540
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229864.peg.7
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229864.peg.777
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229864.peg.2239
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229864.peg.1540
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--L-ornithine ligase	fig|6666666.229864.peg.1987
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229864.peg.7
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.229864.peg.1511
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229864.peg.681
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229864.peg.2582
Periplasmic_Stress_Response	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229864.peg.733
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229864.peg.987
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegS	fig|6666666.229864.peg.694
Persister_Cells	HipA protein	fig|6666666.229864.peg.1660
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229864.peg.646
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229864.peg.1761
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229864.peg.645
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229864.peg.1762
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death antitoxin YdcD	fig|6666666.229864.peg.948
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death toxin MazF like	fig|6666666.229864.peg.921
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death toxin YdcE	fig|6666666.229864.peg.949
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229864.peg.296
Phosphoenolpyruvate_phosphomutase	2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)	fig|6666666.229864.peg.212
Phosphoenolpyruvate_phosphomutase	Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)	fig|6666666.229864.peg.210
Phosphoenolpyruvate_phosphomutase	Phosphonopyruvate decarboxylase (EC 4.1.1.82)	fig|6666666.229864.peg.211
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229864.peg.776
Phosphoglycerate_mutase_protein_family	Carboxyl-terminal protease (EC 3.4.21.102)	fig|6666666.229864.peg.2541
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229864.peg.992
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229864.peg.2434
Photorespiration_(oxidative_C2_cycle)	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229864.peg.2155
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229864.peg.2366
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229864.peg.2368
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.118
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.228
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.620
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.873
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.928
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1262
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1381
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1525
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1689
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1919
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2135
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2361
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2499
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.229864.peg.2365
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229864.peg.2364
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229864.peg.2363
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229864.peg.1095
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229864.peg.1049
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229864.peg.1769
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229864.peg.588
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229864.peg.1768
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229864.peg.244
Polyadenylation_bacterial	Poly(A) polymerase (EC 2.7.7.19)	fig|6666666.229864.peg.2461
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229864.peg.2195
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229864.peg.2187
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229864.peg.1269
Polyamine_Metabolism	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229864.peg.2264
Polyamine_Metabolism	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229864.peg.870
Polyamine_Metabolism	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229864.peg.2264
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229864.peg.1355
Polyhydroxybutyrate_metabolism	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.229864.peg.1772
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229864.peg.329
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229864.peg.329
Polyprenyl_Diphosphate_Biosynthesis	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229864.peg.2583
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229864.peg.328
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229864.peg.736
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229864.peg.681
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229864.peg.2582
Potassium_homeostasis	Glutathione-regulated potassium-efflux system ancillary protein KefG	fig|6666666.229864.peg.1523
Potassium_homeostasis	Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase)	fig|6666666.229864.peg.1189
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229864.peg.689
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229864.peg.1253
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229864.peg.1482
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229864.peg.1253
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229864.peg.1482
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1252
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1465
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1483
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1252
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1465
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229864.peg.1483
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229864.peg.445
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229864.peg.445
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.229864.peg.1151
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229864.peg.2153
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229864.peg.1206
Proteasome_bacterial	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229864.peg.2410
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229864.peg.780
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229864.peg.2409
Proteasome_bacterial	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229864.peg.19
Proteasome_bacterial	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229864.peg.18
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229864.peg.1832
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229864.peg.2171
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229864.peg.2172
Proteasome_bacterial	Site-specific tyrosine recombinase	fig|6666666.229864.peg.17
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229864.peg.486
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229864.peg.1790
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229864.peg.1789
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229864.peg.874
Protein_chaperones	ClpB protein	fig|6666666.229864.peg.435
Protein_chaperones	ClpB protein	fig|6666666.229864.peg.719
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229864.peg.1788
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229864.peg.830
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229864.peg.1179
Protein_degradation	Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)	fig|6666666.229864.peg.529
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229864.peg.528
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229864.peg.2410
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229864.peg.527
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229864.peg.780
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229864.peg.2409
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229864.peg.19
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229864.peg.18
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229864.peg.1832
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229864.peg.2171
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229864.peg.2172
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229864.peg.435
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229864.peg.719
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229864.peg.908
Proteolysis_in_bacteria,_ATP-dependent	Nucleotide excision repair protein, with UvrB/UvrC motif	fig|6666666.229864.peg.437
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegS	fig|6666666.229864.peg.694
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229864.peg.328
Purine_Utilization	Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4)	fig|6666666.229864.peg.1891
Purine_Utilization	Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)	fig|6666666.229864.peg.1892
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.229864.peg.161
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229864.peg.2033
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229864.peg.655
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229864.peg.2421
Purine_conversions	Adenosine deaminase (EC 3.5.4.4)	fig|6666666.229864.peg.1362
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229864.peg.2267
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229864.peg.293
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229864.peg.2453
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229864.peg.2453
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229864.peg.337
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229864.peg.1047
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229864.peg.1629
Purine_conversions	dNTP triphosphohydrolase, putative	fig|6666666.229864.peg.204
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229864.peg.2173
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229864.peg.465
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229864.peg.2453
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229864.peg.2453
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229864.peg.1047
Putative_TldE-TldD_proteolytic_complex	TldD family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229864.peg.795
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229864.peg.96
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229864.peg.112
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229864.peg.95
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229864.peg.113
Putative_TldE-TldD_proteolytic_complex	TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229864.peg.794
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229864.peg.1871
Pyrimidine_utilization	Uracil permease	fig|6666666.229864.peg.650
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229864.peg.598
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229864.peg.1827
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.229864.peg.2249
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229864.peg.300
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229864.peg.301
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Malate Na(+) symporter	fig|6666666.229864.peg.1080
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229864.peg.837
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229864.peg.1518
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229864.peg.924
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229864.peg.295
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229864.peg.2006
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229864.peg.2094
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.229864.peg.1962
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229864.peg.904
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229864.peg.672
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229864.peg.1837
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229864.peg.1206
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.229864.peg.783
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229864.peg.602
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229864.peg.864
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229864.peg.1364
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229864.peg.1835
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229864.peg.2547
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229864.peg.2011
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229864.peg.843
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229864.peg.1603
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229864.peg.2378
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229864.peg.2379
RNA_3'-terminal_phosphate_cyclase	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229864.peg.1969
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229864.peg.2545
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)	fig|6666666.229864.peg.2571
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229864.peg.239
RNA_methylation	LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM	fig|6666666.229864.peg.930
RNA_methylation	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229864.peg.371
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229864.peg.474
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229864.peg.2540
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229864.peg.1927
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229864.peg.2235
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229864.peg.905
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229864.peg.2047
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229864.peg.2285
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229864.peg.1214
RNA_methylation	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229864.peg.1005
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229864.peg.1852
RNA_methylation	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229864.peg.484
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229864.peg.1769
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229864.peg.588
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229864.peg.1768
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229864.peg.581
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229864.peg.905
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229864.peg.1990
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229864.peg.581
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229864.peg.232
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229864.peg.786
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229864.peg.789
RNA_modification_cluster	Protein YidD	fig|6666666.229864.peg.787
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229864.peg.788
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229864.peg.1956
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229864.peg.810
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229864.peg.809
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229864.peg.273
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229864.peg.2183
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229864.peg.2038
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229864.peg.184
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229864.peg.961
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229864.peg.2237
RNA_pseudouridine_syntheses	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229864.peg.2022
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229864.peg.596
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229864.peg.670
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229864.peg.2258
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcC	fig|6666666.229864.peg.1345
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcD	fig|6666666.229864.peg.1344
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229864.peg.629
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229864.peg.1654
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229864.peg.2449
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229864.peg.282
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229864.peg.672
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229864.peg.1837
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229864.peg.1348
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229864.peg.1466
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229864.peg.1163
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229864.peg.519
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229864.peg.644
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229864.peg.1027
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229864.peg.1298
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229864.peg.1537
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229864.peg.1758
Restriction-Modification_System	Putative predicted metal-dependent hydrolase	fig|6666666.229864.peg.1535
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229864.peg.1123
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229864.peg.1539
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229864.peg.1124
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229864.peg.1536
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229864.peg.1117
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229864.peg.1120
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229864.peg.1121
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229864.peg.1538
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229864.peg.1263
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229864.peg.236
Rhamnose_containing_glycans	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229864.peg.214
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229864.peg.235
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229864.peg.2490
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.229864.peg.1876
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229864.peg.237
Rhamnose_containing_glycans	putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide	fig|6666666.229864.peg.216
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229864.peg.1236
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229864.peg.2193
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229864.peg.1236
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229864.peg.2193
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229864.peg.281
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229864.peg.1236
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229864.peg.2193
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.1464
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.1502
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.1519
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.1782
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.1975
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.2092
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229864.peg.2209
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229864.peg.1236
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229864.peg.2193
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229864.peg.2258
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229864.peg.955
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229864.peg.1305
Ribonucleases_in_Bacillus	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229864.peg.240
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229864.peg.1305
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229864.peg.2525
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229864.peg.133
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229864.peg.1510
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229864.peg.1504
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.229864.peg.132
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229864.peg.996
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229864.peg.2201
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229864.peg.1950
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229864.peg.2046
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229864.peg.184
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229864.peg.961
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229864.peg.2237
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229864.peg.1927
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229864.peg.2235
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229864.peg.596
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229864.peg.264
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229864.peg.2047
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229864.peg.528
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229864.peg.737
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229864.peg.739
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229864.peg.738
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229864.peg.485
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229864.peg.1838
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229864.peg.1966
Rubrerythrin	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229864.peg.1173
Rubrerythrin	Rubredoxin	fig|6666666.229864.peg.2206
Rubrerythrin	Rubrerythrin	fig|6666666.229864.peg.1599
Rubrerythrin	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229864.peg.2491
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.229864.peg.2533
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229864.peg.281
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229864.peg.2532
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229864.peg.2572
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.229864.peg.871
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229864.peg.853
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229864.peg.854
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.229864.peg.366
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229864.peg.520
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229864.peg.522
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229864.peg.853
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229864.peg.1241
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229864.peg.1243
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229864.peg.1910
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229864.peg.1912
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229864.peg.2149
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.229864.peg.2107
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229864.peg.1181
Serine-glyoxylate_cycle	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229864.peg.1210
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229864.peg.313
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229864.peg.314
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.118
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.228
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.620
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.873
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.928
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1262
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1381
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1525
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1689
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.1919
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2135
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2361
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229864.peg.2499
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229864.peg.1175
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229864.peg.1175
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229864.peg.1049
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229864.peg.2356
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229864.peg.379
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229864.peg.379
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229864.peg.1049
Serine_endopeptidase_(EC_3.4.21.-)	Prolyl endopeptidase (EC 3.4.21.26)	fig|6666666.229864.peg.2
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229864.peg.2583
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Hypothetical similar to thiamin biosynthesis lipoprotein ApbE	fig|6666666.229864.peg.1000
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229864.peg.1001
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229864.peg.78
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229864.peg.449
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229864.peg.1013
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229864.peg.1132
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229864.peg.2224
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229864.peg.2225
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229864.peg.483
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229864.peg.1793
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229864.peg.2277
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.229864.peg.1064
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229864.peg.1791
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229864.peg.1792
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229864.peg.2278
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229864.peg.2276
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229864.peg.2278
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229864.peg.1001
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229864.peg.116
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229864.peg.261
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229864.peg.621
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229864.peg.1805
Sporulation-associated_proteins_with_broader_functions	Protein of unknown function identified by role in sporulation (SpoVG)	fig|6666666.229864.peg.141
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229864.peg.2289
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229864.peg.2413
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229864.peg.260
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.229864.peg.1829
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229864.peg.686
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229864.peg.685
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229864.peg.257
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229864.peg.6
Stationary_phase_repair_cluster	FIG139438: lipoprotein B	fig|6666666.229864.peg.198
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229864.peg.1285
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, large permease component	fig|6666666.229864.peg.2175
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, periplasmic component	fig|6666666.229864.peg.2176
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229864.peg.685
Teichoic_and_lipoteichoic_acids_biosynthesis	N-acetylmannosaminyltransferase (EC 2.4.1.187)	fig|6666666.229864.peg.2539
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229864.peg.214
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid translocation permease protein TagG	fig|6666666.229864.peg.213
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229864.peg.1051
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229864.peg.407
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229864.peg.1010
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229864.peg.1406
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229864.peg.1418
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229864.peg.1446
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229864.peg.2340
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229864.peg.406
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229864.peg.944
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229864.peg.1011
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229864.peg.407
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229864.peg.1010
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229864.peg.1406
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229864.peg.1418
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229864.peg.1446
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229864.peg.2340
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229864.peg.406
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229864.peg.944
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229864.peg.1011
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229864.peg.1457
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229864.peg.2203
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229864.peg.1457
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229864.peg.2203
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229864.peg.2569
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229864.peg.1321
Thiamin_biosynthesis	Thiamin ABC transporter, substrate-binding component	fig|6666666.229864.peg.1319
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229864.peg.1320
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229864.peg.2055
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229864.peg.2057
Thiamin_biosynthesis	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229864.peg.953
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229864.peg.1908
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229864.peg.2094
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229864.peg.1206
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229864.peg.799
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229864.peg.2406
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229864.peg.593
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229864.peg.1057
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229864.peg.790
Threonine_degradation	Low-specificity L-threonine aldolase (EC 4.1.2.5)	fig|6666666.229864.peg.1166
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229864.peg.327
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229864.peg.1207
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229864.peg.2424
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229864.peg.1079
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229864.peg.1472
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229864.peg.1672
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229864.peg.1825
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229864.peg.1903
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229864.peg.2315
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229864.peg.836
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229864.peg.1244
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229864.peg.1605
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229864.peg.2350
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229864.peg.2385
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229864.peg.381
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229864.peg.1397
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229864.peg.1901
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229864.peg.380
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229864.peg.1900
Toxin-antitoxin_replicon_stabilization_systems	VapB protein (antitoxin to VapC)	fig|6666666.229864.peg.530
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229864.peg.531
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229864.peg.1473
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229864.peg.1671
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229864.peg.357
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229864.peg.960
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229864.peg.1824
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229864.peg.1902
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229864.peg.2262
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229864.peg.2167
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229864.peg.815
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229864.peg.1875
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229864.peg.1075
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229864.peg.297
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229864.peg.2261
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229864.peg.2395
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229864.peg.91
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229864.peg.148
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229864.peg.1233
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229864.peg.2096
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoE	fig|6666666.229864.peg.1256
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.229864.peg.1064
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.229864.peg.793
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229864.peg.1457
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229864.peg.2203
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.229864.peg.2105
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.229864.peg.2126
Translation_elongation_factor_P_lysylation	Translation elongation factor P Lys34:lysine transferase	fig|6666666.229864.peg.676
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229864.peg.1457
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229864.peg.2203
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.229864.peg.2105
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.229864.peg.2554
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.229864.peg.2126
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.229864.peg.738
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229864.peg.1932
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229864.peg.2383
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229864.peg.2259
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229864.peg.487
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229864.peg.2260
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229864.peg.559
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229864.peg.2470
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229864.peg.883
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229864.peg.445
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229864.peg.2384
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229864.peg.1805
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229864.peg.882
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229864.peg.737
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229864.peg.260
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229864.peg.536
Transport_of_Nickel_and_Cobalt	Additional component NikL of nickel ECF transporter	fig|6666666.229864.peg.534
Transport_of_Nickel_and_Cobalt	Additional periplasmic component NikK of nickel ECF transporter	fig|6666666.229864.peg.460
Transport_of_Nickel_and_Cobalt	Predicted cobalt ABC transporter periplasmic component	fig|6666666.229864.peg.458
Transport_of_Nickel_and_Cobalt	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229864.peg.535
Transport_of_Nickel_and_Cobalt	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229864.peg.537
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229864.peg.124
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229864.peg.126
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229864.peg.1253
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229864.peg.1482
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229864.peg.1265
Trehalose_Uptake_and_Utilization	Trehalase (EC 3.2.1.28)	fig|6666666.229864.peg.2152
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229864.peg.549
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229864.peg.1541
Triacylglycerol_metabolism	Lysophospholipase L2 (EC 3.1.1.5)	fig|6666666.229864.peg.1527
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229864.peg.549
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229864.peg.1541
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229864.peg.288
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229864.peg.373
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229864.peg.286
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229864.peg.2330
Two-component_regulatory_systems_in_Campylobacter	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229864.peg.285
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.229864.peg.1174
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229864.peg.1123
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229864.peg.1539
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229864.peg.1124
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229864.peg.1536
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229864.peg.1117
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229864.peg.1120
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229864.peg.1121
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229864.peg.1538
Type_VI_secretion_systems	ClpB protein	fig|6666666.229864.peg.435
Type_VI_secretion_systems	ClpB protein	fig|6666666.229864.peg.719
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229864.peg.2026
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229864.peg.1258
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229864.peg.1802
USS-DB-7	ClpB protein	fig|6666666.229864.peg.435
USS-DB-7	ClpB protein	fig|6666666.229864.peg.719
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229864.peg.1475
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229864.peg.1248
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229864.peg.959
Universal_GTPases	GTP-binding protein Era	fig|6666666.229864.peg.2556
Universal_GTPases	GTP-binding protein HflX	fig|6666666.229864.peg.1127
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229864.peg.471
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229864.peg.2484
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229864.peg.581
Universal_GTPases	Probable GTPase related to EngC	fig|6666666.229864.peg.1106
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229864.peg.245
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229864.peg.442
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229864.peg.489
Universal_GTPases	Translation elongation factor G	fig|6666666.229864.peg.1457
Universal_GTPases	Translation elongation factor G	fig|6666666.229864.peg.2203
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229864.peg.2554
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229864.peg.1932
Universal_GTPases	Translation initiation factor 2	fig|6666666.229864.peg.2260
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229864.peg.1871
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229864.peg.1509
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229864.peg.2351
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 4	fig|6666666.229864.peg.885
Valine_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.229864.peg.1772
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229864.peg.1101
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229864.peg.426
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229864.peg.1109
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229864.peg.2124
Yfa_cluster	Competence/damage-inducible protein CinA	fig|6666666.229864.peg.2441
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229864.peg.264
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229864.peg.897
YjeE	NAD(P)HX dehydratase	fig|6666666.229864.peg.171
YjeE	NAD(P)HX epimerase	fig|6666666.229864.peg.171
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229864.peg.264
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229864.peg.265
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229864.peg.372
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229864.peg.480
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229864.peg.978
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229864.peg.780
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229864.peg.2409
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229864.peg.2421
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229864.peg.387
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229864.peg.929
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229864.peg.1329
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229864.peg.1331
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229864.peg.1378
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229864.peg.1570
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229864.peg.1578
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229864.peg.2093
cAMP_signaling_in_bacteria	Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase	fig|6666666.229864.peg.2040
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.229864.peg.280
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229864.peg.10
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229864.peg.9
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229864.peg.8
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229864.peg.11
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229864.peg.777
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229864.peg.2239
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229864.peg.10
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229864.peg.9
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229864.peg.11
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229864.peg.377
dNTP_triphosphohydrolase_protein_family	dNTP triphosphohydrolase, putative	fig|6666666.229864.peg.204
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229864.peg.236
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229864.peg.237
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.852
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.1267
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.1841
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229864.peg.452
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229864.peg.581
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229864.peg.1990
n-Phenylalkanoic_acid_degradation	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	fig|6666666.229864.peg.1772
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229864.peg.2101
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229864.peg.2478
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229864.peg.16
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229864.peg.1846
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229864.peg.2414
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229864.peg.2033
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229864.peg.655
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.229864.peg.1071
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229864.peg.2588
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229864.peg.481
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229864.peg.2241
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229864.peg.1629
pyrimidine_conversions	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229864.peg.592
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229864.peg.1908
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229864.peg.984
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.229864.peg.683
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229864.peg.1236
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229864.peg.2193
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229864.peg.1236
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229864.peg.2193
tRNA-dependent_amino_acid_transfers	tRNA-dependent lipid II--amino acid ligase	fig|6666666.229864.peg.2475
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229864.peg.2397
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229864.peg.2129
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229864.peg.2138
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229864.peg.2328
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.229864.peg.1740
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.229864.peg.1739
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.229864.peg.1741
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229864.peg.1257
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229864.peg.1377
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.229864.peg.1740
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.229864.peg.1739
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.229864.peg.1741
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.229864.peg.1377
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229864.peg.1182
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229864.peg.238
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229864.peg.1046
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229864.peg.731
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229864.peg.939
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229864.peg.2216
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229864.peg.1273
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229864.peg.2584
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.229864.peg.622
tRNA_aminoacylation,_Pro	tRNA proofreading protein STM4549	fig|6666666.229864.peg.760
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229864.peg.701
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229864.peg.2244
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229864.peg.2329
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229864.peg.2023
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229864.peg.165
tRNA_modification_Bacteria	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229864.peg.1004
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.852
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.1267
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229864.peg.1841
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229864.peg.452
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229864.peg.2588
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229864.peg.335
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.229864.peg.149
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229864.peg.581
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.229864.peg.1828
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.229864.peg.1829
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.229864.peg.1830
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229864.peg.843
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229864.peg.853
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229864.peg.854
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229864.peg.2047
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229864.peg.2285
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229864.peg.1214
tRNA_modification_Bacteria	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229864.peg.1005
tRNA_modification_Bacteria	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229864.peg.953
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229864.peg.1110
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229864.peg.1286
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229864.peg.243
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229864.peg.1221
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229864.peg.670
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229864.peg.2258
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229864.peg.1990
tRNA_modification_Bacteria	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229864.peg.1620
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229864.peg.143
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229864.peg.1603
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229864.peg.2317
tRNA_modification_Bacteria	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229864.peg.484
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229864.peg.2187
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229864.peg.788
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.229864.peg.354
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229864.peg.243
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229864.peg.1221
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229864.peg.670
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229864.peg.2258
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229864.peg.143
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229864.peg.2317
tRNA_splicing	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229864.peg.1969
tRNAs	tRNA-Ala-CGC	fig|6666666.229864.rna.32
tRNAs	tRNA-Ala-GGC	fig|6666666.229864.rna.20
tRNAs	tRNA-Arg-GCG	fig|6666666.229864.rna.26
tRNAs	tRNA-Cys-GCA	fig|6666666.229864.rna.23
tRNAs	tRNA-Gly-GCC	fig|6666666.229864.rna.42
tRNAs	tRNA-Leu-CAA	fig|6666666.229864.rna.18
tRNAs	tRNA-Leu-CAG	fig|6666666.229864.rna.33
tRNAs	tRNA-Leu-GAG	fig|6666666.229864.rna.44
tRNAs	tRNA-Phe-GAA	fig|6666666.229864.rna.43
tRNAs	tRNA-Pro-CGG	fig|6666666.229864.rna.16
tRNAs	tRNA-Pro-GGG	fig|6666666.229864.rna.45
tRNAs	tRNA-Ser-GGA	fig|6666666.229864.rna.24
tRNAs	tRNA-Trp-CCA	fig|6666666.229864.rna.13
tRNAs	tRNA-Val-GAC	fig|6666666.229864.rna.46
