16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229873.peg.676
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229873.peg.64
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.229873.peg.62
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229873.peg.709
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229873.peg.63
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229873.peg.2266
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229873.peg.1982
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229873.peg.464
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229873.peg.2110
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229873.peg.2137
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229873.peg.967
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229873.peg.2070
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229873.peg.2105
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229873.peg.2373
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229873.peg.2064
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229873.peg.1202
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229873.peg.1203
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229873.peg.1938
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)	fig|6666666.229873.peg.405
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)	fig|6666666.229873.peg.403
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1)	fig|6666666.229873.peg.404
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.229873.peg.713
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229873.peg.1899
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229873.peg.2468
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)	fig|6666666.229873.peg.545
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229873.peg.1897
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229873.peg.2466
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229873.peg.458
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229873.peg.630
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229873.peg.540
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229873.peg.629
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229873.peg.1361
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229873.peg.1896
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229873.peg.2011
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229873.peg.460
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229873.peg.537
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229873.peg.628
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229873.peg.119
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229873.peg.282
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229873.peg.461
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229873.peg.536
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229873.peg.627
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229873.peg.2469
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229873.peg.120
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229873.peg.122
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229873.peg.457
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229873.peg.539
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229873.peg.542
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229873.peg.631
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229873.peg.121
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229873.peg.538
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229873.peg.1898
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229873.peg.696
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229873.peg.1770
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229873.peg.1769
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229873.peg.1988
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229873.peg.2169
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229873.peg.2525
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229873.peg.2169
Adhesion_of_Campylobacter	Fibronectin/fibrinogen-binding protein	fig|6666666.229873.peg.922
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.229873.peg.607
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.229873.peg.608
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.229873.peg.2394
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.229873.peg.605
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.229873.peg.562
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.174
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.1740
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.2167
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229873.peg.1365
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.229873.peg.1913
Allantoin_Utilization	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229873.peg.474
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.32
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.677
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.795
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1095
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1157
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1518
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1760
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1815
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2162
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2274
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2537
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2592
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229873.peg.2308
Aminoglycoside_adenylyltransferases	Aminoglycoside N6'-acetyltransferase (EC 2.3.1.82)	fig|6666666.229873.peg.1468
Aminopeptidases_(EC_3.4.11.-)	Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.24)	fig|6666666.229873.peg.1630
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229873.peg.2376
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229873.peg.849
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229873.peg.1747
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229873.peg.2664
Ammonia_assimilation	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229873.peg.2478
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.229873.peg.2397
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229873.peg.895
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229873.peg.895
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229873.peg.406
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229873.peg.406
Arginine_Deiminase_Pathway	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229873.peg.2515
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229873.peg.1755
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229873.peg.406
Arginine_and_Ornithine_Degradation	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229873.peg.574
Arginine_and_Ornithine_Degradation	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229873.peg.2515
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229873.peg.1755
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229873.peg.469
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229873.peg.406
Arginine_and_Ornithine_Degradation	Ornithine cyclodeaminase (EC 4.3.1.12)	fig|6666666.229873.peg.2010
Arginine_and_Ornithine_Degradation	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229873.peg.574
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229873.peg.582
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229873.peg.2329
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229873.peg.830
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229873.peg.68
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229873.peg.687
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229873.peg.2325
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229873.peg.2531
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229873.peg.676
Bacterial_Cell_Division	Cell division protein FtsJ	fig|6666666.229873.peg.1273
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229873.peg.1880
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229873.peg.2240
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229873.peg.64
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229873.peg.67
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229873.peg.66
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229873.peg.877
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229873.peg.1577
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229873.peg.69
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.229873.peg.62
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229873.peg.1005
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229873.peg.2668
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229873.peg.1201
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229873.peg.706
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229873.peg.707
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229873.peg.708
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.229873.peg.1641
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229873.peg.1354
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229873.peg.63
Bacterial_Chemotaxis	Chemotaxis protein CheX	fig|6666666.229873.peg.857
Bacterial_Chemotaxis	Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)	fig|6666666.229873.peg.130
Bacterial_Chemotaxis	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229873.peg.858
Bacterial_Chemotaxis	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229873.peg.1275
Bacterial_Chemotaxis	Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61)	fig|6666666.229873.peg.131
Bacterial_Chemotaxis	Flagellar motor switch protein FliG	fig|6666666.229873.peg.81
Bacterial_Chemotaxis	Flagellar motor switch protein FliG	fig|6666666.229873.peg.641
Bacterial_Chemotaxis	Flagellar motor switch protein FliM	fig|6666666.229873.peg.2026
Bacterial_Chemotaxis	Flagellar motor switch protein FliN	fig|6666666.229873.peg.2025
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229873.peg.2308
Bacterial_Chemotaxis	Positive regulator of CheA protein activity (CheW)	fig|6666666.229873.peg.856
Bacterial_Chemotaxis	Positive regulator of CheA protein activity (CheW)	fig|6666666.229873.peg.931
Bacterial_Chemotaxis	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229873.peg.855
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229873.peg.830
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229873.peg.68
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229873.peg.676
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229873.peg.1880
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229873.peg.2240
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229873.peg.64
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229873.peg.67
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229873.peg.66
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229873.peg.69
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.229873.peg.62
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229873.peg.2668
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229873.peg.30
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229873.peg.1490
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229873.peg.2667
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229873.peg.706
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229873.peg.707
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229873.peg.708
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229873.peg.710
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.229873.peg.1641
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229873.peg.1880
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229873.peg.2240
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229873.peg.812
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229873.peg.983
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229873.peg.513
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2152
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2371
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2387
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229873.peg.837
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229873.peg.1788
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.229873.peg.452
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229873.peg.709
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.229873.peg.706
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.229873.peg.707
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.229873.peg.708
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.229873.peg.710
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.229873.peg.1641
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.229873.peg.1210
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.229873.peg.1210
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229873.peg.337
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229873.peg.1209
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229873.peg.2038
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229873.peg.1387
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229873.peg.1851
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229873.peg.1989
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229873.peg.1990
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229873.peg.2193
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229873.peg.1354
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229873.peg.1401
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229873.peg.1731
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.229873.peg.1407
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily I	fig|6666666.229873.peg.899
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.229873.peg.1955
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229873.peg.674
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229873.peg.986
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229873.peg.1991
Biotin_biosynthesis	Biotin operon repressor	fig|6666666.229873.peg.2091
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.229873.peg.771
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229873.peg.2091
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229873.peg.421
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229873.peg.1077
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229873.peg.987
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229873.peg.985
Biotin_biosynthesis	predicted biotin regulatory protein BioR (GntR family)	fig|6666666.229873.peg.2197
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.229873.peg.771
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229873.peg.451
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229873.peg.507
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229873.peg.1163
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229873.peg.1900
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229873.peg.1901
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229873.peg.2564
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229873.peg.846
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229873.peg.570
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229873.peg.571
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229873.peg.569
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229873.peg.1083
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229873.peg.1383
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229873.peg.1087
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229873.peg.1085
CBSS-176299.4.peg.1996A	Endoribonuclease L-PSP	fig|6666666.229873.peg.1381
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229873.peg.268
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229873.peg.436
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229873.peg.177
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229873.peg.176
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229873.peg.175
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229873.peg.1735
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229873.peg.2498
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229873.peg.1770
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229873.peg.1769
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229873.peg.682
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229873.peg.486
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229873.peg.2659
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229873.peg.410
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.229873.peg.2439
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.229873.peg.2440
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229873.peg.1188
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229873.peg.727
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229873.peg.1188
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229873.peg.727
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229873.peg.73
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229873.peg.72
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229873.peg.2147
CBSS-292415.3.peg.2341	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229873.peg.1687
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.781
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.807
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.1088
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229873.peg.809
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229873.peg.1069
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229873.peg.1640
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229873.peg.1639
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229873.peg.1397
CBSS-314276.3.peg.1499	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229873.peg.1887
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229873.peg.349
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.229873.peg.347
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.229873.peg.348
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.229873.peg.964
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229873.peg.221
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229873.peg.2313
CBSS-316057.3.peg.1308	RNA polymerase sigma-54 factor RpoN	fig|6666666.229873.peg.1688
CBSS-316273.3.peg.227	Alpha-2-macroglobulin	fig|6666666.229873.peg.1448
CBSS-316273.3.peg.227	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229873.peg.1451
CBSS-316407.3.peg.2816	Protein of unknown function DUF541	fig|6666666.229873.peg.926
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229873.peg.2169
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229873.peg.2169
CBSS-323098.3.peg.2823	Flagellar motor rotation protein MotB	fig|6666666.229873.peg.2028
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229873.peg.1601
CBSS-326442.4.peg.1852	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229873.peg.2517
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229873.peg.102
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229873.peg.100
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229873.peg.1687
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229873.peg.1457
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229873.peg.1840
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229873.peg.2061
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229873.peg.1542
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229873.peg.702
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229873.peg.416
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229873.peg.703
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229873.peg.2131
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229873.peg.707
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229873.peg.708
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.229873.peg.1641
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229873.peg.655
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229873.peg.656
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229873.peg.671
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229873.peg.1884
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229873.peg.1628
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229873.peg.2150
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229873.peg.896
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229873.peg.2285
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.174
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.1740
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.2167
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229873.peg.1248
CBSS-393130.3.peg.794	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229873.peg.1838
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229873.peg.1866
CBSS-469378.4.peg.430	FIG002344: Hydrolase (HAD superfamily)	fig|6666666.229873.peg.2307
CBSS-469378.4.peg.430	RecA protein	fig|6666666.229873.peg.346
CBSS-521098.4.peg.1460	FIG001614: Membrane protein	fig|6666666.229873.peg.2243
CBSS-521098.4.peg.1460	FIG015373: Membrane protein	fig|6666666.229873.peg.2244
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229873.peg.106
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229873.peg.2395
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229873.peg.2396
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.229873.peg.104
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229873.peg.105
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229873.peg.103
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229873.peg.103
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229873.peg.1608
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229873.peg.1635
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229873.peg.621
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229873.peg.676
CBSS-83331.1.peg.3039	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229873.peg.1634
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229873.peg.709
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229873.peg.1637
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.174
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.1740
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.2167
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229873.peg.116
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229873.peg.453
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229873.peg.965
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229873.peg.849
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229873.peg.982
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229873.peg.983
CMP-N-acetylneuraminate_Biosynthesis	N-acetylneuraminate synthase (EC 2.5.1.56)	fig|6666666.229873.peg.439
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.229873.peg.772
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229873.peg.2403
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229873.peg.2404
CRISPRs	CRISPR-associated protein, Csn1 family	fig|6666666.229873.peg.2402
CRISPRs	CRISPR-associated protein, Csn2 family	fig|6666666.229873.peg.2405
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229873.peg.1961
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.798
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.799
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.801
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.803
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.804
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.1681
Cadmium_resistance	Cadmium efflux system accessory protein	fig|6666666.229873.peg.735
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229873.peg.2414
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229873.peg.852
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229873.peg.1049
Calvin-Benson_cycle	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229873.peg.979
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229873.peg.2426
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229873.peg.1864
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.229873.peg.670
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229873.peg.100
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229873.peg.780
Carbon_Starvation	Carbon starvation protein A	fig|6666666.229873.peg.2063
Carbon_Starvation	Carbon storage regulator	fig|6666666.229873.peg.1652
Carbon_storage_regulator	Carbon storage regulator	fig|6666666.229873.peg.1652
Carbon_storage_regulator	Flagellar assembly factor FliW	fig|6666666.229873.peg.1651
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229873.peg.895
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229873.peg.2051
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229873.peg.2668
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229873.peg.30
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229873.peg.1490
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229873.peg.2667
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229873.peg.2372
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229873.peg.2052
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229873.peg.2298
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229873.peg.2297
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229873.peg.1483
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.798
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.799
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.801
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.803
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.804
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.1681
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229873.peg.1684
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229873.peg.1682
Cell_Division_Subsystem_including_YidCD	RNA-binding protein Jag	fig|6666666.229873.peg.1680
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229873.peg.1683
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229873.peg.1794
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229873.peg.301
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229873.peg.830
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229873.peg.687
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229873.peg.2325
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229873.peg.2531
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229873.peg.903
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229873.peg.126
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229873.peg.1126
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229873.peg.1392
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229873.peg.486
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229873.peg.645
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229873.peg.699
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily S (as in PMID19099556)	fig|6666666.229873.peg.1081
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229873.peg.86
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229873.peg.2075
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229873.peg.2411
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229873.peg.1839
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229873.peg.977
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229873.peg.978
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229873.peg.2168
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229873.peg.1020
Chorismate_Synthesis	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229873.peg.866
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229873.peg.596
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229873.peg.977
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229873.peg.978
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229873.peg.1731
Citrate_Metabolism,_Transport,_and_Regulation	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)	fig|6666666.229873.peg.886
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase alpha chain (EC 4.1.3.6)	fig|6666666.229873.peg.969
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.229873.peg.970
Citrate_Metabolism,_Transport,_and_Regulation	[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	fig|6666666.229873.peg.885
ClpAS_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229873.peg.1437
ClpAS_cluster	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229873.peg.1436
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229873.peg.995
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229873.peg.901
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229873.peg.977
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229873.peg.978
CoA_disulfide_thiol-disulfide_redox_system	CoA-disulfide reductase (EC 1.8.1.14)	fig|6666666.229873.peg.2220
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.229873.peg.1669
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.229873.peg.1676
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229873.peg.1671
Cobalamin_synthesis	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	fig|6666666.229873.peg.2276
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229873.peg.58
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229873.peg.2672
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.229873.peg.1929
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.229873.peg.2677
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.229873.peg.2671
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.229873.peg.937
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.229873.peg.2678
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.229873.peg.1827
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.229873.peg.1619
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.229873.peg.1930
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.229873.peg.1959
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.229873.peg.354
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.229873.peg.1928
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229873.peg.117
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229873.peg.1578
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229873.peg.2146
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.229873.peg.2427
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229873.peg.976
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229873.peg.727
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229873.peg.1003
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229873.peg.1695
Colicin_V_and_Bacteriocin_Production_Cluster	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229873.peg.2651
Colicin_V_and_Bacteriocin_Production_Cluster	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229873.peg.1691
Colicin_V_and_Bacteriocin_Production_Cluster	Colicin V production protein	fig|6666666.229873.peg.1278
Colicin_V_and_Bacteriocin_Production_Cluster	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229873.peg.551
Colicin_V_and_Bacteriocin_Production_Cluster	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229873.peg.551
Colicin_V_and_Bacteriocin_Production_Cluster	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229873.peg.1570
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229873.peg.1839
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229873.peg.977
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229873.peg.978
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229873.peg.2168
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229873.peg.1020
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229873.peg.596
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229873.peg.977
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229873.peg.978
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229873.peg.1731
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229873.peg.73
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229873.peg.1777
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229873.peg.982
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229873.peg.983
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229873.peg.905
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229873.peg.1386
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229873.peg.1864
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229873.peg.72
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Serine/threonine protein kinase PrkC, regulator of stationary phase	fig|6666666.229873.peg.981
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2152
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2371
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2387
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229873.peg.837
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229873.peg.1788
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229873.peg.2157
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229873.peg.1810
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229873.peg.736
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229873.peg.2059
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229873.peg.2534
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229873.peg.736
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229873.peg.2059
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229873.peg.2534
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.229873.peg.1540
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229873.peg.106
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229873.peg.2395
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229873.peg.2396
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229873.peg.2224
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229873.peg.2224
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229873.peg.474
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	D-glycerate transporter (predicted)	fig|6666666.229873.peg.2273
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.32
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.677
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.795
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1095
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1157
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1518
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1760
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1815
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2162
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2274
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2537
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2592
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229873.peg.474
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	D-glycerate transporter (predicted)	fig|6666666.229873.peg.2273
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.32
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.677
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.795
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1095
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1157
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1518
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1760
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1815
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2162
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2274
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2537
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2592
D-ribose_utilization	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229873.peg.979
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229873.peg.2426
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229873.peg.2457
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229873.peg.896
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229873.peg.975
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229873.peg.1810
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229873.peg.1493
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229873.peg.2372
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229873.peg.2052
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229873.peg.1855
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.229873.peg.906
DNA_processing_cluster	Protein involved in catabolism of external DNA	fig|6666666.229873.peg.2369
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229873.peg.907
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229873.peg.484
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229873.peg.722
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229873.peg.1758
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229873.peg.442
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229873.peg.1799
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229873.peg.452
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229873.peg.664
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229873.peg.148
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229873.peg.916
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229873.peg.951
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229873.peg.1798
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229873.peg.2539
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229873.peg.2578
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.229873.peg.1070
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229873.peg.491
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229873.peg.1378
DNA_repair,_bacterial	Exonuclease SbcC	fig|6666666.229873.peg.2238
DNA_repair,_bacterial	Exonuclease SbcD	fig|6666666.229873.peg.2237
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229873.peg.955
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229873.peg.2285
DNA_repair,_bacterial	RecA protein	fig|6666666.229873.peg.346
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229873.peg.178
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229873.peg.1011
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229873.peg.1296
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229873.peg.1379
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229873.peg.1870
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.229873.peg.818
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229873.peg.2401
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.229873.peg.2495
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229873.peg.2297
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229873.peg.2496
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.229873.peg.346
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229873.peg.907
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229873.peg.178
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229873.peg.1011
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229873.peg.1493
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.229873.peg.346
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase Rep	fig|6666666.229873.peg.379
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229873.peg.1628
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229873.peg.2150
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229873.peg.1870
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.229873.peg.346
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229873.peg.905
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229873.peg.2051
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229873.peg.2372
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229873.peg.2052
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229873.peg.2298
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229873.peg.2297
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.229873.peg.860
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.229873.peg.1541
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.229873.peg.1043
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229873.peg.73
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229873.peg.2372
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229873.peg.2052
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229873.peg.1429
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229873.peg.1542
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229873.peg.863
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229873.peg.1691
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.229873.peg.1202
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.229873.peg.623
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.229873.peg.181
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.229873.peg.180
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229873.peg.1202
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.229873.peg.622
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.229873.peg.755
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.229873.peg.635
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229873.peg.1203
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229873.peg.1988
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.229873.peg.2194
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.229873.peg.2194
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.229873.peg.1418
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.229873.peg.456
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.229873.peg.456
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229873.peg.475
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229873.peg.1421
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229873.peg.1548
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229873.peg.2512
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229873.peg.2525
Deoxyribose_and_Deoxynucleoside_Catabolism	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229873.peg.1494
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229873.peg.1526
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229873.peg.674
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229873.peg.986
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229873.peg.1991
ECF_class_transporters	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229873.peg.1444
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.294
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.376
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.382
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.938
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.946
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.1466
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.1890
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.2318
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.2334
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.2361
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229873.peg.296
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229873.peg.374
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229873.peg.383
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229873.peg.940
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229873.peg.948
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229873.peg.1467
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229873.peg.1892
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229873.peg.2316
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229873.peg.2336
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229873.peg.2363
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229873.peg.987
ECF_class_transporters	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229873.peg.1443
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.295
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.375
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.381
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.939
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.947
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.1465
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.1891
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.2317
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.2335
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229873.peg.2362
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229873.peg.985
ECF_class_transporters	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229873.peg.1445
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229873.peg.2224
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229873.peg.2224
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229873.peg.427
Entner-Doudoroff_Pathway	Hexokinase (EC 2.7.1.1)	fig|6666666.229873.peg.1749
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229873.peg.852
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229873.peg.1049
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229873.peg.1030
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229873.peg.1873
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229873.peg.1811
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229873.peg.410
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229873.peg.2092
Extracellular_Polysaccharide_Biosynthesis_of_Streptococci	Polysaccharide biosynthesis protein CpsM(V)	fig|6666666.229873.peg.805
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229873.peg.297
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229873.peg.2659
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.229873.peg.2663
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.229873.peg.2650
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229873.peg.2651
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.229873.peg.499
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229873.peg.2653
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229873.peg.2652
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.229873.peg.1208
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.229873.peg.2662
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229873.peg.410
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229873.peg.2425
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229873.peg.2092
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229873.peg.410
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229873.peg.2110
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229873.peg.2137
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.229873.peg.472
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229873.peg.2425
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229873.peg.2092
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229873.peg.858
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229873.peg.1275
Flagellar_motility	Flagellar basal-body rod modification protein FlgD	fig|6666666.229873.peg.2032
Flagellar_motility	Flagellar biosynthesis protein FlhA	fig|6666666.229873.peg.2114
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229873.peg.1596
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229873.peg.2113
Flagellar_motility	Flagellar biosynthesis protein FlhF	fig|6666666.229873.peg.1958
Flagellar_motility	Flagellar biosynthesis protein FliR	fig|6666666.229873.peg.2112
Flagellar_motility	Flagellar motor rotation protein MotA	fig|6666666.229873.peg.2029
Flagellar_motility	Flagellar motor rotation protein MotB	fig|6666666.229873.peg.2028
Flagellar_motility	Flagellar motor switch protein FliM	fig|6666666.229873.peg.2026
Flagellar_motility	Flagellar motor switch protein FliN	fig|6666666.229873.peg.2025
Flagellar_motility	Flagellar synthesis regulator FleN	fig|6666666.229873.peg.1957
Flagellar_motility	Flagellum-specific ATP synthase FliI	fig|6666666.229873.peg.83
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.229873.peg.1688
Flagellar_motility	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229873.peg.855
Flagellum	Flagellar M-ring protein FliF	fig|6666666.229873.peg.80
Flagellum	Flagellar assembly protein FliH	fig|6666666.229873.peg.82
Flagellum	Flagellar basal-body rod modification protein FlgD	fig|6666666.229873.peg.2032
Flagellum	Flagellar basal-body rod protein FlgB	fig|6666666.229873.peg.77
Flagellum	Flagellar basal-body rod protein FlgC	fig|6666666.229873.peg.78
Flagellum	Flagellar basal-body rod protein FlgF	fig|6666666.229873.peg.480
Flagellum	Flagellar basal-body rod protein FlgG	fig|6666666.229873.peg.481
Flagellum	Flagellar biosynthesis protein FlhA	fig|6666666.229873.peg.2114
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229873.peg.1596
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229873.peg.2113
Flagellum	Flagellar biosynthesis protein FlhF	fig|6666666.229873.peg.1958
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229873.peg.1615
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229873.peg.2027
Flagellum	Flagellar biosynthesis protein FliP	fig|6666666.229873.peg.2023
Flagellum	Flagellar biosynthesis protein FliQ	fig|6666666.229873.peg.2111
Flagellum	Flagellar biosynthesis protein FliR	fig|6666666.229873.peg.2112
Flagellum	Flagellar biosynthesis protein FliS	fig|6666666.229873.peg.2184
Flagellum	Flagellar biosynthesis protein FliZ	fig|6666666.229873.peg.2024
Flagellum	Flagellar hook protein FlgE	fig|6666666.229873.peg.2031
Flagellum	Flagellar hook-associated protein FlgK	fig|6666666.229873.peg.1649
Flagellum	Flagellar hook-associated protein FlgL	fig|6666666.229873.peg.1650
Flagellum	Flagellar hook-associated protein FliD	fig|6666666.229873.peg.841
Flagellum	Flagellar hook-basal body complex protein FliE	fig|6666666.229873.peg.79
Flagellum	Flagellar hook-length control protein FliK	fig|6666666.229873.peg.2033
Flagellum	Flagellar motor rotation protein MotA	fig|6666666.229873.peg.2029
Flagellum	Flagellar motor rotation protein MotB	fig|6666666.229873.peg.2028
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229873.peg.81
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229873.peg.641
Flagellum	Flagellar motor switch protein FliM	fig|6666666.229873.peg.2026
Flagellum	Flagellar motor switch protein FliN	fig|6666666.229873.peg.2025
Flagellum	Flagellar protein FlbB	fig|6666666.229873.peg.692
Flagellum	Flagellar protein FlbD	fig|6666666.229873.peg.2030
Flagellum	Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)	fig|6666666.229873.peg.482
Flagellum	Flagellar protein FliJ	fig|6666666.229873.peg.84
Flagellum	Flagellar synthesis regulator FleN	fig|6666666.229873.peg.1957
Flagellum	Flagellin protein FlaA	fig|6666666.229873.peg.478
Flagellum	Flagellin protein FlaA	fig|6666666.229873.peg.843
Flagellum	Flagellin protein FlaA	fig|6666666.229873.peg.844
Flagellum	Flagellin protein FlaG	fig|6666666.229873.peg.842
Flagellum	Flagellum-specific ATP synthase FliI	fig|6666666.229873.peg.83
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229873.peg.416
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229873.peg.703
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229873.peg.2131
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.229873.peg.1688
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229873.peg.676
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgB	fig|6666666.229873.peg.77
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgC	fig|6666666.229873.peg.78
Flagellum_in_Campylobacter	Flagellar hook-basal body complex protein FliE	fig|6666666.229873.peg.79
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229873.peg.478
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229873.peg.843
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229873.peg.844
Flavodoxin	Flavodoxin	fig|6666666.229873.peg.44
Flavodoxin	Flavodoxin	fig|6666666.229873.peg.2230
Flavodoxin	Flavodoxin	fig|6666666.229873.peg.2340
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229873.peg.464
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229873.peg.551
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229873.peg.551
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229873.peg.2508
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.229873.peg.2385
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229873.peg.687
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229873.peg.2325
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229873.peg.2531
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229873.peg.903
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229873.peg.699
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229873.peg.936
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229873.peg.1474
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229873.peg.821
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229873.peg.2148
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229873.peg.1224
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229873.peg.1473
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229873.peg.1472
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229873.peg.1052
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229873.peg.1052
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229873.peg.821
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229873.peg.1066
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229873.peg.1189
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.229873.peg.2532
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229873.peg.469
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229873.peg.469
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229873.peg.1003
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229873.peg.1695
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229873.peg.1300
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229873.peg.816
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229873.peg.1747
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229873.peg.2664
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229873.peg.2478
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229873.peg.469
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229873.peg.469
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229873.peg.1687
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229873.peg.2332
Glutathione:_Redox_cycle	Glutathione peroxidase (EC 1.11.1.9)	fig|6666666.229873.peg.1065
Glycerate_metabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229873.peg.474
Glycerate_metabolism	D-glycerate transporter (predicted)	fig|6666666.229873.peg.2273
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.32
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.677
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.795
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1095
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1157
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1518
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1760
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1815
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2162
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2274
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2537
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2592
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229873.peg.1811
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229873.peg.1216
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3)	fig|6666666.229873.peg.2311
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.229873.peg.1388
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229873.peg.1910
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229873.peg.2198
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229873.peg.1402
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229873.peg.268
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229873.peg.436
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	NADH peroxidase (EC 1.11.1.1)	fig|6666666.229873.peg.2160
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Probable glycerol transport protein	fig|6666666.229873.peg.266
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229873.peg.499
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229873.peg.2110
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229873.peg.2137
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229873.peg.1793
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229873.peg.1842
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229873.peg.1939
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.32
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.677
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.795
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1095
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1157
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1518
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1760
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1815
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2162
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2274
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2537
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2592
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229873.peg.1216
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229873.peg.1910
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229873.peg.2198
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229873.peg.1402
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229873.peg.1636
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229873.peg.1497
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229873.peg.1685
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229873.peg.1938
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229873.peg.1497
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229873.peg.965
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229873.peg.961
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.32
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.677
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.795
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1095
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1157
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1518
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1760
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1815
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2162
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2274
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2537
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2592
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.229873.peg.964
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229873.peg.963
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229873.peg.962
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229873.peg.870
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229873.peg.871
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229873.peg.1280
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229873.peg.1938
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229873.peg.1601
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229873.peg.965
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229873.peg.967
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.229873.peg.964
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229873.peg.963
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229873.peg.962
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B alpha subunit (EC 1.21.4.4)	fig|6666666.229873.peg.2139
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229873.peg.2140
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229873.peg.2141
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229873.peg.2142
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B alpha subunit (EC 1.21.4.2)	fig|6666666.229873.peg.1433
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B beta subunit (EC 1.21.4.2)	fig|6666666.229873.peg.1433
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229873.peg.1430
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229873.peg.1431
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229873.peg.1432
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 1	fig|6666666.229873.peg.2315
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 2	fig|6666666.229873.peg.2314
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229873.peg.222
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229873.peg.223
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229873.peg.224
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229873.peg.221
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229873.peg.2313
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229873.peg.220
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229873.peg.1674
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229873.peg.1346
Glycogen_metabolism	Glycogen branching enzyme, GH-57-type, archaeal (EC 2.4.1.18)	fig|6666666.229873.peg.561
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229873.peg.2165
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229873.peg.1699
Glycogen_metabolism	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229873.peg.925
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229873.peg.1982
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229873.peg.427
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229873.peg.2414
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229873.peg.1844
Glycolysis_and_Gluconeogenesis	Hexokinase (EC 2.7.1.1)	fig|6666666.229873.peg.1749
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229873.peg.852
Glycolysis_and_Gluconeogenesis	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229873.peg.2423
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229873.peg.1049
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229873.peg.1030
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229873.peg.1873
Glycolysis_and_Gluconeogenesis	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit (EC 2.7.1.90)	fig|6666666.229873.peg.2125
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.229873.peg.908
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229873.peg.1811
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229873.peg.316
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229873.peg.865
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229873.peg.100
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229873.peg.2496
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229873.peg.1201
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229873.peg.2071
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229873.peg.106
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229873.peg.2395
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229873.peg.2396
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229873.peg.105
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229873.peg.103
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229873.peg.112
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229873.peg.1398
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229873.peg.111
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229873.peg.42
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229873.peg.415
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229873.peg.110
Group_II_intron-associated_genes	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	fig|6666666.229873.peg.1561
HPr_catabolite_repression_system	Catabolite repression HPr-like protein Crh	fig|6666666.229873.peg.657
HPr_catabolite_repression_system	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229873.peg.658
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229873.peg.112
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229873.peg.1398
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229873.peg.111
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229873.peg.110
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.229873.peg.835
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.229873.peg.43
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229873.peg.1566
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229873.peg.1181
Heat_shock_dnaK_gene_cluster_extended	Signal peptidase-like protein	fig|6666666.229873.peg.2178
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229873.peg.1198
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229873.peg.2266
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229873.peg.1193
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229873.peg.833
Hfl_operon	GTP-binding protein HflX	fig|6666666.229873.peg.2006
Hfl_operon	HflC protein	fig|6666666.229873.peg.691
Hfl_operon	HflK protein	fig|6666666.229873.peg.690
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229873.peg.2373
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.229873.peg.2649
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.229873.peg.2106
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.229873.peg.1876
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229873.peg.514
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229873.peg.1566
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229873.peg.2153
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229873.peg.2386
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2152
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2371
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2387
Hypothetical_protein_HNE_2485	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229873.peg.1825
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229873.peg.222
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229873.peg.224
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229873.peg.1430
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229873.peg.1432
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229873.peg.1741
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229873.peg.2140
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229873.peg.2142
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.229873.peg.1071
Integrons	Integron integrase IntIPac	fig|6666666.229873.peg.1147
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229873.peg.2048
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229873.peg.73
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229873.peg.103
Inteins	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229873.peg.2423
Inteins	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229873.peg.274
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229873.peg.689
Inteins	Translation initiation factor 2	fig|6666666.229873.peg.571
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, ATP-binding subunit	fig|6666666.229873.peg.879
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, permease protein 2	fig|6666666.229873.peg.878
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, substrate binding protein	fig|6666666.229873.peg.876
Iron_transport_system_including_ABC_transporter	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229873.peg.874
Iron_transport_system_including_ABC_transporter	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229873.peg.875
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229873.peg.895
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229873.peg.1635
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229873.peg.1211
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229873.peg.621
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229873.peg.1586
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229873.peg.1585
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229873.peg.696
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229873.peg.563
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229873.peg.895
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229873.peg.1637
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229873.peg.895
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229873.peg.895
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229873.peg.895
Isoprenoinds_for_Quinones	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229873.peg.1225
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229873.peg.1637
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229873.peg.357
KH_domain_RNA_binding_protein_YlqC	KH domain RNA binding protein YlqC	fig|6666666.229873.peg.356
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229873.peg.355
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.229873.peg.2549
LOS_core_oligosaccharide_biosynthesis	Beta-1,4-galactosyltransferase	fig|6666666.229873.peg.794
LOS_core_oligosaccharide_biosynthesis	Beta-1,4-galactosyltransferase	fig|6666666.229873.peg.797
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229873.peg.1712
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229873.peg.1714
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229873.peg.1713
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229873.peg.1711
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229873.peg.1716
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229873.peg.206
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229873.peg.1715
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.781
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.807
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.1088
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229873.peg.714
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229873.peg.821
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229873.peg.1066
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229873.peg.1189
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229873.peg.1512
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229873.peg.1592
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229873.peg.2518
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229873.peg.1516
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	fig|6666666.229873.peg.1515
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.781
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.807
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.1088
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229873.peg.1066
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229873.peg.1189
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.229873.peg.772
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229873.peg.967
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-)	fig|6666666.229873.peg.211
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229873.peg.917
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229873.peg.909
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229873.peg.1919
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229873.peg.1042
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229873.peg.1593
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229873.peg.1884
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229873.peg.750
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229873.peg.2080
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229873.peg.1351
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229873.peg.1352
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229873.peg.1350
LysR-family_proteins_in_Escherichia_coli	Chromosome initiation inhibitor	fig|6666666.229873.peg.2472
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.229873.peg.2130
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229873.peg.702
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229873.peg.416
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229873.peg.703
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229873.peg.2131
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229873.peg.1752
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229873.peg.1788
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229873.peg.106
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229873.peg.2395
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229873.peg.2396
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229873.peg.506
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229873.peg.336
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.229873.peg.1984
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229873.peg.1674
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229873.peg.714
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229873.peg.1699
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.229873.peg.2309
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.229873.peg.2310
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229873.peg.2308
Maltose_and_Maltodextrin_Utilization	Oligo-1,6-glucosidase (EC 3.2.1.10)	fig|6666666.229873.peg.2171
Mannitol_Utilization	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229873.peg.658
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229873.peg.2148
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229873.peg.116
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229873.peg.453
Methanogenesis_strays	Ni2+-binding GTPase involved in regulation of expression and maturation of hydrogenase	fig|6666666.229873.peg.2545
Methanogenesis_strays	Uncharacterized ABC transporter ATP-binding protein MJ0121	fig|6666666.229873.peg.2544
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229873.peg.186
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.229873.peg.1501
Methionine_Degradation	Methionine transporter MetT	fig|6666666.229873.peg.1503
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229873.peg.153
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229873.peg.1499
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229873.peg.2169
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229873.peg.1750
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229873.peg.2169
Methionine_Salvage	5-methylthioribose kinase (EC 2.7.1.100)	fig|6666666.229873.peg.183
Methionine_Salvage	Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)	fig|6666666.229873.peg.1001
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229873.peg.1793
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229873.peg.1793
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229873.peg.1687
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229873.peg.2332
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229873.peg.1879
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229873.peg.918
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229873.peg.1193
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32)	fig|6666666.229873.peg.883
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32)	fig|6666666.229873.peg.884
Multidrug_Resistance_Efflux_Pumps	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)	fig|6666666.229873.peg.2611
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.281
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.527
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.943
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.2370
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.2407
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.2424
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.2674
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229873.peg.1754
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229873.peg.1977
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229873.peg.116
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229873.peg.453
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229873.peg.1457
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229873.peg.1048
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229873.peg.2556
Murein_Hydrolases	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	fig|6666666.229873.peg.1574
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229873.peg.1710
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229873.peg.1709
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.798
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.799
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.801
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.803
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.804
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.1681
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Protein YidD	fig|6666666.229873.peg.1682
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	RNA-binding protein Jag	fig|6666666.229873.peg.1680
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.229873.peg.1462
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.229873.peg.1463
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.229873.peg.1464
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229873.peg.519
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229873.peg.520
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229873.peg.521
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229873.peg.2364
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229873.peg.235
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229873.peg.86
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229873.peg.2075
N-linked_Glycosylation_in_Bacteria	Phospholipid-lipopolysaccharide ABC transporter	fig|6666666.229873.peg.1720
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.781
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.807
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.1088
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229873.peg.2061
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.229873.peg.751
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229873.peg.933
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.229873.peg.751
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229873.peg.2241
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.229873.peg.1082
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229873.peg.1200
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.229873.peg.741
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229873.peg.742
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229873.peg.310
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229873.peg.309
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229873.peg.308
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229873.peg.307
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229873.peg.306
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Sodium-dependent phosphate transporter	fig|6666666.229873.peg.1269
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229873.peg.1473
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229873.peg.1472
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.229873.peg.2547
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.229873.peg.2548
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229873.peg.1635
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229873.peg.1211
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229873.peg.621
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229873.peg.1586
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229873.peg.1585
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229873.peg.696
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229873.peg.563
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229873.peg.1580
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229873.peg.2061
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229873.peg.514
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.229873.peg.2375
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229873.peg.573
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229873.peg.570
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229873.peg.572
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229873.peg.571
Omega_peptidases_(EC_3.4.19.-)	Acylamino-acid-releasing enzyme (EC 3.4.19.1)	fig|6666666.229873.peg.2164
Omega_peptidases_(EC_3.4.19.-)	Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	fig|6666666.229873.peg.2242
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229873.peg.464
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229873.peg.2070
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229873.peg.2105
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229873.peg.2064
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229873.peg.2064
Oxidative_stress	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229873.peg.2062
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.229873.peg.1212
Oxidative_stress	Rubrerythrin	fig|6666666.229873.peg.2494
Oxidative_stress	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229873.peg.1089
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.229873.peg.1885
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229873.peg.979
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229873.peg.2426
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229873.peg.1988
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229873.peg.1864
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.229873.peg.670
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229873.peg.203
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229873.peg.203
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229873.peg.676
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229873.peg.1672
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229873.peg.116
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229873.peg.453
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229873.peg.816
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229873.peg.1076
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229873.peg.709
Peptidoglycan_Biosynthesis	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229873.peg.1451
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.229873.peg.1546
Peptidoglycan_Biosynthesis	Rare lipoprotein A precursor	fig|6666666.229873.peg.1342
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.229873.peg.710
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229873.peg.2158
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229873.peg.124
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229873.peg.1279
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229873.peg.552
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229873.peg.2441
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229873.peg.65
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229873.peg.1672
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229873.peg.552
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229873.peg.2441
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--L-ornithine ligase	fig|6666666.229873.peg.299
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229873.peg.65
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.229873.peg.2416
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229873.peg.1581
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229873.peg.1224
Periplasmic_Stress_Response	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229873.peg.1634
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229873.peg.1869
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegS	fig|6666666.229873.peg.1595
Persister_Cells	HipA protein	fig|6666666.229873.peg.2565
Phage_tail_fiber_proteins	Phage tail fiber protein	fig|6666666.229873.peg.9
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229873.peg.1104
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229873.peg.1108
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229873.peg.1133
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229873.peg.1544
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229873.peg.2017
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229873.peg.2660
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229873.peg.1134
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229873.peg.1543
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229873.peg.2661
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229873.peg.866
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.229873.peg.476
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229873.peg.53
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229873.peg.54
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.229873.peg.52
Phosphate_metabolism	Phosphate regulon transcriptional regulatory protein PhoB (SphR)	fig|6666666.229873.peg.2560
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229873.peg.103
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229873.peg.103
Phosphate_metabolism	Pyrophosphate-energized proton pump (EC 3.6.1.1)	fig|6666666.229873.peg.134
Phosphate_metabolism	Sodium-dependent phosphate transporter	fig|6666666.229873.peg.1269
Phosphoenolpyruvate_phosphomutase	2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)	fig|6666666.229873.peg.765
Phosphoenolpyruvate_phosphomutase	Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)	fig|6666666.229873.peg.763
Phosphoenolpyruvate_phosphomutase	Phosphonopyruvate decarboxylase (EC 4.1.1.82)	fig|6666666.229873.peg.764
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229873.peg.1671
Phosphoglycerate_mutase_protein_family	Carboxyl-terminal protease (EC 3.4.21.102)	fig|6666666.229873.peg.1182
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229873.peg.1030
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229873.peg.1873
Phosphoglycerate_mutase_protein_family	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229873.peg.1787
Photorespiration_(oxidative_C2_cycle)	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229873.peg.474
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229873.peg.965
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229873.peg.967
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.32
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.677
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.795
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1095
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1157
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1518
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1760
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1815
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2162
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2274
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2537
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2592
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.229873.peg.964
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229873.peg.963
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229873.peg.962
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229873.peg.1982
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229873.peg.1938
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229873.peg.2668
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229873.peg.30
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229873.peg.1490
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229873.peg.2667
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229873.peg.816
Polyadenylation_bacterial	Poly(A) polymerase (EC 2.7.7.19)	fig|6666666.229873.peg.1060
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229873.peg.513
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229873.peg.505
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229873.peg.2169
Polyamine_Metabolism	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229873.peg.574
Polyamine_Metabolism	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229873.peg.1755
Polyamine_Metabolism	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229873.peg.574
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229873.peg.2248
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229873.peg.895
Polyprenyl_Diphosphate_Biosynthesis	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229873.peg.1225
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229873.peg.1637
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229873.peg.1581
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229873.peg.1224
Potassium_homeostasis	Glutathione-regulated potassium-efflux system ancillary protein KefG	fig|6666666.229873.peg.2428
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229873.peg.1589
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229873.peg.2153
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229873.peg.2386
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229873.peg.2153
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229873.peg.2386
Potassium_homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.229873.peg.1728
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2152
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2371
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2387
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2152
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2371
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229873.peg.2387
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229873.peg.1357
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229873.peg.1357
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.229873.peg.2039
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229873.peg.469
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229873.peg.2092
Proteasome_bacterial	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229873.peg.1007
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229873.peg.1006
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229873.peg.1675
Proteasome_bacterial	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229873.peg.76
Proteasome_bacterial	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229873.peg.75
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229873.peg.164
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229873.peg.490
Proteasome_bacterial	Site-specific tyrosine recombinase	fig|6666666.229873.peg.74
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229873.peg.112
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229873.peg.1398
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229873.peg.111
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229873.peg.1761
Protein_chaperones	ClpB protein	fig|6666666.229873.peg.1347
Protein_chaperones	ClpB protein	fig|6666666.229873.peg.1620
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229873.peg.110
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229873.peg.1729
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229873.peg.2068
Protein_degradation	Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)	fig|6666666.229873.peg.1438
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229873.peg.1437
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229873.peg.1007
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229873.peg.1436
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229873.peg.1006
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229873.peg.1675
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229873.peg.76
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229873.peg.75
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229873.peg.164
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229873.peg.490
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229873.peg.1347
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229873.peg.1620
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229873.peg.1799
Proteolysis_in_bacteria,_ATP-dependent	Nucleotide excision repair protein, with UvrB/UvrC motif	fig|6666666.229873.peg.1349
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegS	fig|6666666.229873.peg.1595
Purine_Utilization	Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4)	fig|6666666.229873.peg.213
Purine_Utilization	Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)	fig|6666666.229873.peg.214
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.229873.peg.716
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229873.peg.344
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229873.peg.1551
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229873.peg.1018
Purine_conversions	Adenosine deaminase (EC 3.5.4.4)	fig|6666666.229873.peg.2254
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229873.peg.577
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229873.peg.863
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229873.peg.1052
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229873.peg.1052
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229873.peg.903
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229873.peg.1936
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229873.peg.2525
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229873.peg.491
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229873.peg.1378
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229873.peg.1052
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229873.peg.1052
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229873.peg.1936
Putative_TldE-TldD_proteolytic_complex	TldD family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229873.peg.1690
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229873.peg.655
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229873.peg.656
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229873.peg.671
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229873.peg.672
Putative_TldE-TldD_proteolytic_complex	TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229873.peg.1689
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229873.peg.203
Pyrimidine_utilization	Uracil permease	fig|6666666.229873.peg.1548
Pyrroloquinoline_Quinone_biosynthesis	Microsomal dipeptidase (EC 3.4.13.19)	fig|6666666.229873.peg.1698
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229873.peg.153
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229873.peg.1499
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.229873.peg.562
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229873.peg.870
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229873.peg.871
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Malate Na(+) symporter	fig|6666666.229873.peg.1969
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229873.peg.1730
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229873.peg.2423
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229873.peg.1811
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229873.peg.316
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229873.peg.865
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229873.peg.410
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.229873.peg.265
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229873.peg.1793
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229873.peg.170
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229873.peg.1572
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229873.peg.2092
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.229873.peg.1678
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229873.peg.168
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229873.peg.1190
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229873.peg.1502
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229873.peg.1751
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229873.peg.2256
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229873.peg.321
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229873.peg.1735
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229873.peg.2498
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229873.peg.977
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229873.peg.978
RNA_3'-terminal_phosphate_cyclase	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229873.peg.274
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229873.peg.1188
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)	fig|6666666.229873.peg.1213
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229873.peg.811
RNA_methylation	LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM	fig|6666666.229873.peg.1817
RNA_methylation	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229873.peg.1273
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229873.peg.1386
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229873.peg.1181
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229873.peg.548
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229873.peg.1794
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229873.peg.358
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229873.peg.594
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229873.peg.2109
RNA_methylation	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229873.peg.1888
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229873.peg.184
RNA_methylation	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229873.peg.1396
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229873.peg.2668
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229873.peg.30
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229873.peg.1490
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229873.peg.2667
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229873.peg.1483
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229873.peg.1794
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229873.peg.301
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229873.peg.1483
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.798
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.799
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.801
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.803
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.804
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229873.peg.1681
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229873.peg.1684
RNA_modification_cluster	Protein YidD	fig|6666666.229873.peg.1682
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229873.peg.1683
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229873.peg.259
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229873.peg.1710
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229873.peg.1709
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229873.peg.846
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229873.peg.500
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229873.peg.349
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229873.peg.738
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229873.peg.550
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229873.peg.1847
RNA_pseudouridine_syntheses	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229873.peg.332
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229873.peg.1498
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229873.peg.1570
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229873.peg.569
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcC	fig|6666666.229873.peg.2238
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcD	fig|6666666.229873.peg.2237
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229873.peg.1526
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229873.peg.1048
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229873.peg.2556
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229873.peg.852
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229873.peg.170
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229873.peg.1572
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229873.peg.2241
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229873.peg.2372
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229873.peg.2052
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229873.peg.1429
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229873.peg.1542
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229873.peg.1910
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229873.peg.2198
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229873.peg.2302
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229873.peg.2303
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229873.peg.2657
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229873.peg.2001
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229873.peg.2002
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229873.peg.1998
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229873.peg.2680
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229873.peg.2681
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229873.peg.2683
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229873.peg.384
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229873.peg.2163
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229873.peg.808
Rhamnose_containing_glycans	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229873.peg.767
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.781
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.807
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229873.peg.1088
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.229873.peg.207
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229873.peg.780
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229873.peg.809
Rhamnose_containing_glycans	putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide	fig|6666666.229873.peg.786
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229873.peg.511
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229873.peg.2135
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229873.peg.511
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229873.peg.2135
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229873.peg.851
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229873.peg.511
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229873.peg.2135
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.281
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.527
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.943
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.2370
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.2407
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.2424
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229873.peg.2674
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229873.peg.511
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229873.peg.2135
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229873.peg.569
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229873.peg.1840
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229873.peg.905
Ribonucleases_in_Bacillus	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229873.peg.812
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229873.peg.905
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229873.peg.1162
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229873.peg.689
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229873.peg.2415
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229873.peg.2409
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.229873.peg.688
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229873.peg.1879
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229873.peg.519
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229873.peg.253
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.229873.peg.1712
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.229873.peg.1714
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.229873.peg.324
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.229873.peg.247
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.229873.peg.255
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.229873.peg.244
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.229873.peg.260
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.229873.peg.252
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.229873.peg.359
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229873.peg.1713
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.229873.peg.1462
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.229873.peg.1087
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.229873.peg.242
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.229873.peg.239
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.229873.peg.248
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.229873.peg.698
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.229873.peg.1085
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.229873.peg.463
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.229873.peg.245
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.229873.peg.240
Ribosome_LSU_bacterial	LSU ribosomal protein L30p (L7e)	fig|6666666.229873.peg.254
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.229873.peg.868
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-dependent	fig|6666666.229873.peg.868
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.229873.peg.1717
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-dependent	fig|6666666.229873.peg.1717
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.229873.peg.1684
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.229873.peg.1463
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.229873.peg.237
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.229873.peg.238
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.229873.peg.249
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.229873.peg.251
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229873.peg.1711
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.229873.peg.1009
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229873.peg.357
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229873.peg.738
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229873.peg.550
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229873.peg.1847
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229873.peg.548
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229873.peg.1498
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229873.peg.837
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229873.peg.358
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229873.peg.1437
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229873.peg.1638
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229873.peg.1640
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229873.peg.1639
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229873.peg.1397
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229873.peg.171
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229873.peg.271
Rubrerythrin	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229873.peg.2062
Rubrerythrin	Rubredoxin	fig|6666666.229873.peg.524
Rubrerythrin	Rubrerythrin	fig|6666666.229873.peg.2494
Rubrerythrin	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229873.peg.1089
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.229873.peg.1171
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229873.peg.851
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229873.peg.1170
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229873.peg.1214
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.229873.peg.1757
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229873.peg.1741
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229873.peg.1742
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.229873.peg.1268
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229873.peg.222
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229873.peg.224
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229873.peg.1430
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229873.peg.1432
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229873.peg.1741
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229873.peg.2140
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229873.peg.2142
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229873.peg.464
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.229873.peg.427
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229873.peg.2070
Serine-glyoxylate_cycle	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229873.peg.2105
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229873.peg.883
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229873.peg.884
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.32
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.677
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.795
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1095
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1157
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1518
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1760
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.1815
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2162
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2274
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2537
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229873.peg.2592
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229873.peg.2064
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229873.peg.2064
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229873.peg.1938
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229873.peg.961
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229873.peg.1280
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229873.peg.1280
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229873.peg.1938
Serine_endopeptidase_(EC_3.4.21.-)	Prolyl endopeptidase (EC 3.4.21.26)	fig|6666666.229873.peg.60
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229873.peg.1225
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Hypothetical similar to thiamin biosynthesis lipoprotein ApbE	fig|6666666.229873.peg.1883
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229873.peg.1884
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229873.peg.540
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229873.peg.629
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229873.peg.1361
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229873.peg.1896
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229873.peg.2011
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229873.peg.115
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229873.peg.586
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229873.peg.1394
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.229873.peg.1955
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229873.peg.113
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229873.peg.114
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229873.peg.587
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229873.peg.585
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229873.peg.587
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229873.peg.1884
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229873.peg.675
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229873.peg.834
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229873.peg.1519
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229873.peg.126
Sporulation-associated_proteins_with_broader_functions	Protein of unknown function identified by role in sporulation (SpoVG)	fig|6666666.229873.peg.697
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229873.peg.42
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229873.peg.1010
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229873.peg.833
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229873.peg.1586
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229873.peg.1585
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229873.peg.830
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229873.peg.64
Stationary_phase_repair_cluster	FIG139438: lipoprotein B	fig|6666666.229873.peg.752
Sucrose_utilization	Predicted sucrose permease, MFS family, FucP subfamily	fig|6666666.229873.peg.1809
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229873.peg.2186
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, periplasmic component	fig|6666666.229873.peg.494
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229873.peg.1585
Teichoic_and_lipoteichoic_acids_biosynthesis	N-acetylmannosaminyltransferase (EC 2.4.1.187)	fig|6666666.229873.peg.1180
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229873.peg.767
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid translocation permease protein TagG	fig|6666666.229873.peg.766
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229873.peg.1940
Teichoic_and_lipoteichoic_acids_biosynthesis	diglucosyldiacylglycerol synthase (LTA membrane anchor synthesis)	fig|6666666.229873.peg.98
Teichuronic_acid_biosynthesis	Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase	fig|6666666.229873.peg.789
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.949
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.1315
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.1893
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.2078
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.2281
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.2304
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.2320
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.2355
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229873.peg.673
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229873.peg.1314
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229873.peg.1894
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.949
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.1315
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.1893
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.2078
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.2281
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.2304
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.2320
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229873.peg.2355
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229873.peg.673
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229873.peg.1314
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229873.peg.1894
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229873.peg.521
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229873.peg.2364
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229873.peg.521
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229873.peg.2364
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229873.peg.1211
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229873.peg.2212
Thiamin_biosynthesis	Thiamin ABC transporter, substrate-binding component	fig|6666666.229873.peg.2210
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229873.peg.367
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229873.peg.369
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229873.peg.2211
Thiamin_biosynthesis	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229873.peg.1838
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229873.peg.220
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229873.peg.410
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229873.peg.2092
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229873.peg.1003
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229873.peg.1695
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229873.peg.1495
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229873.peg.1946
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229873.peg.1685
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.229873.peg.1523
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229873.peg.894
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229873.peg.1021
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229873.peg.2093
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229873.peg.1968
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229873.peg.148
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229873.peg.916
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229873.peg.951
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229873.peg.1798
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229873.peg.2539
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229873.peg.2578
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229873.peg.37
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229873.peg.166
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229873.peg.2143
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229873.peg.2504
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229873.peg.165
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229873.peg.1239
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229873.peg.1284
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229873.peg.2542
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229873.peg.1238
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229873.peg.1283
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229873.peg.2543
Toxin-antitoxin_replicon_stabilization_systems	VapB protein (antitoxin to VapC)	fig|6666666.229873.peg.824
Toxin-antitoxin_replicon_stabilization_systems	VapB protein (antitoxin to VapC)	fig|6666666.229873.peg.1439
Toxin-antitoxin_replicon_stabilization_systems	VapB protein (antitoxin to VapC)	fig|6666666.229873.peg.2390
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229873.peg.150
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229873.peg.1440
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229873.peg.2389
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229873.peg.2577
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229873.peg.1259
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229873.peg.1846
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229873.peg.149
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229873.peg.915
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229873.peg.2540
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229873.peg.573
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229873.peg.486
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229873.peg.206
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229873.peg.1715
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229873.peg.1964
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229873.peg.867
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229873.peg.572
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229873.peg.993
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229873.peg.645
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229873.peg.416
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229873.peg.703
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229873.peg.2131
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoE	fig|6666666.229873.peg.2156
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.229873.peg.1955
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.229873.peg.1688
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229873.peg.521
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229873.peg.2364
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.229873.peg.424
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.229873.peg.447
Translation_elongation_factor_P_lysylation	Translation elongation factor P Lys34:lysine transferase	fig|6666666.229873.peg.1576
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229873.peg.521
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229873.peg.2364
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.229873.peg.424
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.229873.peg.1198
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.229873.peg.447
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.229873.peg.1639
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229873.peg.235
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229873.peg.982
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229873.peg.570
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229873.peg.1399
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229873.peg.571
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229873.peg.1464
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229873.peg.1069
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229873.peg.1770
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229873.peg.1357
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229873.peg.983
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229873.peg.126
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229873.peg.1769
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229873.peg.1638
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229873.peg.833
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229873.peg.1444
Transport_of_Nickel_and_Cobalt	Additional component NikL of nickel ECF transporter	fig|6666666.229873.peg.1442
Transport_of_Nickel_and_Cobalt	Additional periplasmic component NikK of nickel ECF transporter	fig|6666666.229873.peg.1373
Transport_of_Nickel_and_Cobalt	Predicted cobalt ABC transporter periplasmic component	fig|6666666.229873.peg.1371
Transport_of_Nickel_and_Cobalt	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229873.peg.1443
Transport_of_Nickel_and_Cobalt	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229873.peg.1445
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229873.peg.682
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229873.peg.2153
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229873.peg.2386
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229873.peg.2165
Trehalose_Uptake_and_Utilization	Trehalase (EC 3.2.1.28)	fig|6666666.229873.peg.468
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229873.peg.1454
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229873.peg.2444
Triacylglycerol_metabolism	Lysophospholipase L2 (EC 3.1.1.5)	fig|6666666.229873.peg.2430
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229873.peg.1454
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229873.peg.2444
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229873.peg.858
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229873.peg.1275
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229873.peg.856
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229873.peg.931
Two-component_regulatory_systems_in_Campylobacter	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229873.peg.855
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.229873.peg.2063
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229873.peg.2001
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229873.peg.2002
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229873.peg.1998
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229873.peg.2680
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229873.peg.2681
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229873.peg.2683
Type_VI_secretion_systems	ClpB protein	fig|6666666.229873.peg.1347
Type_VI_secretion_systems	ClpB protein	fig|6666666.229873.peg.1620
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229873.peg.337
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229873.peg.2158
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229873.peg.124
USS-DB-7	ClpB protein	fig|6666666.229873.peg.1347
USS-DB-7	ClpB protein	fig|6666666.229873.peg.1620
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229873.peg.2380
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229873.peg.2147
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229873.peg.1845
Universal_GTPases	GTP-binding protein Era	fig|6666666.229873.peg.1201
Universal_GTPases	GTP-binding protein HflX	fig|6666666.229873.peg.2006
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229873.peg.1083
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229873.peg.1383
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229873.peg.1483
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229873.peg.817
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229873.peg.1354
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229873.peg.1401
Universal_GTPases	Translation elongation factor G	fig|6666666.229873.peg.521
Universal_GTPases	Translation elongation factor G	fig|6666666.229873.peg.2364
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229873.peg.1198
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229873.peg.235
Universal_GTPases	Translation initiation factor 2	fig|6666666.229873.peg.571
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229873.peg.203
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229873.peg.2414
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229873.peg.955
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 4	fig|6666666.229873.peg.1778
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229873.peg.1987
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229873.peg.445
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229873.peg.1341
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229873.peg.1993
Yfa_cluster	Competence/damage-inducible protein CinA	fig|6666666.229873.peg.1040
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229873.peg.837
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229873.peg.1788
YjeE	NAD(P)HX dehydratase	fig|6666666.229873.peg.723
YjeE	NAD(P)HX epimerase	fig|6666666.229873.peg.723
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229873.peg.837
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229873.peg.838
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229873.peg.1274
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229873.peg.1391
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229873.peg.1860
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229873.peg.1006
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229873.peg.1675
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229873.peg.1018
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229873.peg.408
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229873.peg.1292
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229873.peg.2221
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229873.peg.2271
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229873.peg.2473
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229873.peg.2482
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229873.peg.68
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229873.peg.67
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229873.peg.66
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229873.peg.69
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229873.peg.1672
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229873.peg.552
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229873.peg.68
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229873.peg.67
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229873.peg.69
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229873.peg.1279
dTDP-rhamnose_synthesis	Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33)	fig|6666666.229873.peg.775
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229873.peg.808
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229873.peg.780
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229873.peg.809
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.174
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.1740
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.2167
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229873.peg.1365
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229873.peg.1483
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229873.peg.301
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229873.peg.421
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229873.peg.1077
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229873.peg.73
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229873.peg.178
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229873.peg.1011
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229873.peg.344
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229873.peg.1551
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.229873.peg.1961
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229873.peg.1233
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229873.peg.554
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229873.peg.1392
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229873.peg.2525
pyrimidine_conversions	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229873.peg.1494
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229873.peg.220
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229873.peg.1866
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.229873.peg.1583
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229873.peg.511
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229873.peg.2135
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229873.peg.511
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229873.peg.2135
tRNA-dependent_amino_acid_transfers	tRNA-dependent lipid II--amino acid ligase	fig|6666666.229873.peg.1074
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229873.peg.995
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229873.peg.450
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229873.peg.454
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229873.peg.929
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.229873.peg.2640
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.229873.peg.2639
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.229873.peg.2641
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229873.peg.2157
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229873.peg.2270
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.229873.peg.2640
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.229873.peg.2639
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.229873.peg.2641
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.229873.peg.2270
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229873.peg.2071
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229873.peg.810
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229873.peg.1935
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229873.peg.1632
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229873.peg.1825
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229873.peg.532
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229873.peg.2174
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229873.peg.1229
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.229873.peg.1520
tRNA_aminoacylation,_Pro	tRNA proofreading protein STM4549	fig|6666666.229873.peg.1655
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229873.peg.1601
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229873.peg.557
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229873.peg.930
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229873.peg.333
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229873.peg.719
tRNA_modification_Bacteria	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229873.peg.1887
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.174
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.1740
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229873.peg.2167
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229873.peg.1365
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229873.peg.1233
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229873.peg.901
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.229873.peg.704
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229873.peg.1483
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.229873.peg.154
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.229873.peg.155
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.229873.peg.156
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229873.peg.1735
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229873.peg.1741
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229873.peg.1742
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229873.peg.358
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229873.peg.594
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229873.peg.2109
tRNA_modification_Bacteria	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229873.peg.1888
tRNA_modification_Bacteria	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229873.peg.1838
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229873.peg.1994
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229873.peg.2187
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229873.peg.815
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229873.peg.2118
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229873.peg.1570
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229873.peg.569
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229873.peg.301
tRNA_modification_Bacteria	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229873.peg.2517
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229873.peg.699
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229873.peg.2498
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229873.peg.918
tRNA_modification_Bacteria	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229873.peg.1396
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229873.peg.505
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229873.peg.1683
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.229873.peg.1256
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229873.peg.815
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229873.peg.2118
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229873.peg.1570
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229873.peg.569
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229873.peg.699
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229873.peg.918
tRNA_splicing	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229873.peg.274
tRNAs	tRNA-Ala-CGC	fig|6666666.229873.rna.5
tRNAs	tRNA-Ala-GGC	fig|6666666.229873.rna.37
tRNAs	tRNA-Arg-GCG	fig|6666666.229873.rna.43
tRNAs	tRNA-Cys-GCA	fig|6666666.229873.rna.40
tRNAs	tRNA-Gly-GCC	fig|6666666.229873.rna.16
tRNAs	tRNA-Leu-CAA	fig|6666666.229873.rna.35
tRNAs	tRNA-Leu-CAG	fig|6666666.229873.rna.6
tRNAs	tRNA-Leu-GAG	fig|6666666.229873.rna.18
tRNAs	tRNA-Phe-GAA	fig|6666666.229873.rna.17
tRNAs	tRNA-Pro-CGG	fig|6666666.229873.rna.33
tRNAs	tRNA-Pro-GGG	fig|6666666.229873.rna.19
tRNAs	tRNA-Ser-GGA	fig|6666666.229873.rna.41
tRNAs	tRNA-Trp-CCA	fig|6666666.229873.rna.30
tRNAs	tRNA-Val-GAC	fig|6666666.229873.rna.20
