16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229899.peg.1702
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229899.peg.1703
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.229899.peg.1705
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229899.peg.1235
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229899.peg.1704
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229899.peg.375
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229899.peg.313
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229899.peg.1606
2-phosphoglycolate_salvage	Putative phosphatase YqaB	fig|6666666.229899.peg.1420
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229899.peg.208
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229899.peg.877
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229899.peg.450
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229899.peg.1678
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.229899.peg.1210
5-FCL-like_protein	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229899.peg.255
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229899.peg.254
5-FCL-like_protein	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.229899.peg.109
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229899.peg.1314
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229899.peg.256
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229899.peg.1996
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229899.peg.1674
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229899.peg.2283
ABC_transporter_of_unknown_substrate_X	Possible ABC transporter, periplasmic substrate X binding protein precursor	fig|6666666.229899.peg.277
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, ATP-binding subunit	fig|6666666.229899.peg.280
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, permease subunit I	fig|6666666.229899.peg.279
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, permease subunit II	fig|6666666.229899.peg.278
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229899.peg.1942
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229899.peg.2215
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229899.peg.2216
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229899.peg.1937
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229899.peg.1936
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229899.peg.1939
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229899.peg.1940
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229899.peg.1941
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229899.peg.1938
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.229899.peg.2152
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229899.peg.413
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.229899.peg.348
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Outer membrane lipoprotein LolB	fig|6666666.229899.peg.412
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229899.peg.2150
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229899.peg.2151
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229899.peg.414
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	FIG138056: a glutathione-dependent thiol reductase	fig|6666666.229899.peg.1687
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229899.peg.1686
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229899.peg.585
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229899.peg.598
A_conserved_operon_linked_to_TyrR_and_possibly_involved_in_virulence	Conserved protein YcjX with nucleoside triphosphate hydrolase domain	fig|6666666.229899.peg.2174
A_conserved_operon_linked_to_TyrR_and_possibly_involved_in_virulence	Membrane protein YcjF	fig|6666666.229899.peg.2175
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.229899.peg.922
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.229899.peg.923
Acyl-CoA_thioesterase_II	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.229899.peg.2128
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229899.peg.219
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229899.peg.1575
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229899.peg.219
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.229899.peg.2278
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229899.peg.193
Alanine_biosynthesis	Chaperone protein HscA	fig|6666666.229899.peg.1903
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229899.peg.1907
Alanine_biosynthesis	Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA	fig|6666666.229899.peg.2326
Alanine_biosynthesis	Ferredoxin, 2Fe-2S	fig|6666666.229899.peg.1902
Alanine_biosynthesis	HTH-type transcriptional regulator IlvY	fig|6666666.229899.peg.998
Alanine_biosynthesis	Iron binding protein IscA for iron-sulfur cluster assembly	fig|6666666.229899.peg.1905
Alanine_biosynthesis	Iron-sulfur cluster assembly scaffold protein IscU	fig|6666666.229899.peg.1906
Alanine_biosynthesis	Iron-sulfur cluster regulator IscR	fig|6666666.229899.peg.1908
Alkylphosphonate_utilization	Alkylphosphonate utilization operon protein PhnA	fig|6666666.229899.peg.2255
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.1553
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.2187
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229899.peg.2303
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229899.peg.205
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.229899.peg.8
Aminopeptidases_(EC_3.4.11.-)	Peptidase B (EC 3.4.11.23)	fig|6666666.229899.peg.1620
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229899.peg.880
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229899.peg.431
Ammonia_assimilation	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.229899.peg.155
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229899.peg.576
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.229899.peg.1771
Ammonia_assimilation	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.229899.peg.300
Anaerobic_respiratory_reductases	Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)	fig|6666666.229899.peg.1414
Anaerobic_respiratory_reductases	Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)	fig|6666666.229899.peg.1413
Anaerobic_respiratory_reductases	Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)	fig|6666666.229899.peg.1412
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229899.peg.797
Anaerobic_respiratory_reductases	Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)	fig|6666666.229899.peg.2094
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229899.peg.2245
Archaeal_lipids	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229899.peg.786
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229899.peg.2245
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229899.peg.2245
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229899.peg.189
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.229899.peg.1819
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.229899.peg.161
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229899.peg.1686
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229899.peg.790
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229899.peg.189
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.229899.peg.1819
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.229899.peg.161
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229899.peg.1686
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229899.peg.790
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229899.peg.189
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.229899.peg.788
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229899.peg.789
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229899.peg.790
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, ATP-binding protein ArtP	fig|6666666.229899.peg.1710
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, periplasmic arginine-binding protein ArtI	fig|6666666.229899.peg.1709
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, permease protein ArtM	fig|6666666.229899.peg.1707
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, permease protein ArtQ	fig|6666666.229899.peg.1708
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229899.peg.189
Arginine_and_Ornithine_Degradation	Arginine/ornithine antiporter ArcD	fig|6666666.229899.peg.788
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229899.peg.789
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229899.peg.1818
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229899.peg.790
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229899.peg.604
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229899.peg.797
Arsenic_resistance	Arsenic efflux pump protein	fig|6666666.229899.peg.200
Arsenic_resistance	Arsenic efflux pump protein	fig|6666666.229899.peg.1557
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component	fig|6666666.229899.peg.2359
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	fig|6666666.229899.peg.2360
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD	fig|6666666.229899.peg.2361
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	fig|6666666.229899.peg.276
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	fig|6666666.229899.peg.2362
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)	fig|6666666.229899.peg.2363
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)	fig|6666666.229899.peg.2357
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) modifying protein LsrG	fig|6666666.229899.peg.2364
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	LsrR, transcriptional repressor of lsr operon	fig|6666666.229899.peg.2358
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229899.peg.1423
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229899.peg.2383
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229899.peg.2380
Auxin_biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229899.peg.2368
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229899.peg.2369
Bacterial_Cell_Division	Cell division protein BolA	fig|6666666.229899.peg.1088
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229899.peg.1608
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229899.peg.1692
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229899.peg.107
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229899.peg.1702
Bacterial_Cell_Division	Cell division protein FtsJ	fig|6666666.229899.peg.108
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229899.peg.2052
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229899.peg.1703
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229899.peg.1693
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229899.peg.1697
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229899.peg.308
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229899.peg.1566
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229899.peg.1691
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.229899.peg.1705
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.229899.peg.1567
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229899.peg.596
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229899.peg.526
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229899.peg.629
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229899.peg.888
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229899.peg.887
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229899.peg.886
Bacterial_Cell_Division	Septum site-determining protein MinC	fig|6666666.229899.peg.2155
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229899.peg.1568
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229899.peg.1704
Bacterial_Chemotaxis	Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)	fig|6666666.229899.peg.1637
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229899.peg.2303
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229899.peg.1608
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229899.peg.1692
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229899.peg.1702
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229899.peg.2052
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229899.peg.1703
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229899.peg.1693
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229899.peg.1697
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229899.peg.1691
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.229899.peg.1705
Bacterial_Cytoskeleton	Cell division protein ZipA	fig|6666666.229899.peg.756
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229899.peg.888
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229899.peg.887
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229899.peg.886
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229899.peg.1236
Bacterial_Cytoskeleton	Septum site-determining protein MinC	fig|6666666.229899.peg.2155
Bacterial_Cytoskeleton	Z-ring-associated protein ZapA	fig|6666666.229899.peg.878
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229899.peg.2052
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229899.peg.1977
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ferric uptake regulation protein FUR	fig|6666666.229899.peg.129
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229899.peg.810
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229899.peg.1546
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229899.peg.1990
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229899.peg.807
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229899.peg.2310
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229899.peg.761
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229899.peg.1568
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229899.peg.1186
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229899.peg.1145
Biofilm_Adhesin_Biosynthesis	Biofilm PGA outer membrane secretin PgaA	fig|6666666.229899.peg.1577
Biofilm_Adhesin_Biosynthesis	Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-)	fig|6666666.229899.peg.1579
Biofilm_Adhesin_Biosynthesis	Biofilm PGA synthesis deacetylase PgaB (EC 3.-)	fig|6666666.229899.peg.1578
Biogenesis_of_c-type_cytochromes	ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA	fig|6666666.229899.peg.660
Biogenesis_of_c-type_cytochromes	ABC transporter involved in cytochrome c biogenesis, CcmB subunit	fig|6666666.229899.peg.659
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmF	fig|6666666.229899.peg.655
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmH	fig|6666666.229899.peg.652
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmL	fig|6666666.229899.peg.653
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE	fig|6666666.229899.peg.658
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE	fig|6666666.229899.peg.657
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmE, heme chaperone	fig|6666666.229899.peg.656
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase	fig|6666666.229899.peg.654
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.229899.peg.1931
Biogenesis_of_c-type_cytochromes	Periplasmic thiol:disulfide interchange protein DsbA	fig|6666666.229899.peg.1750
Biogenesis_of_c-type_cytochromes	Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation	fig|6666666.229899.peg.678
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.229899.peg.1178
Biogenesis_of_cytochrome_c_oxidases	Ferredoxin--NADP(+) reductase (EC 1.18.1.2)	fig|6666666.229899.peg.2235
Biogenesis_of_cytochrome_c_oxidases	Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly	fig|6666666.229899.peg.929
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.229899.peg.1218
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229899.peg.1049
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229899.peg.1679
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.229899.peg.1217
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.229899.peg.2049
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.229899.peg.1220
Biotin_biosynthesis	Biotin synthesis protein BioG	fig|6666666.229899.peg.1219
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229899.peg.2166
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229899.peg.1221
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229899.peg.2356
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229899.peg.1811
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229899.peg.2312
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229899.peg.2313
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.229899.peg.1218
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.229899.peg.1217
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.229899.peg.2049
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.229899.peg.1220
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioG	fig|6666666.229899.peg.1219
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229899.peg.1398
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229899.peg.1221
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229899.peg.2356
Biotin_biosynthesis_Experimental	NfuA Fe-S protein maturation	fig|6666666.229899.peg.1399
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.229899.peg.1218
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229899.peg.1049
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229899.peg.1679
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.229899.peg.1217
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.229899.peg.2049
Biotin_synthesis_cluster	Biotin synthesis protein BioC	fig|6666666.229899.peg.1220
Biotin_synthesis_cluster	Biotin synthesis protein BioG	fig|6666666.229899.peg.1219
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229899.peg.2166
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229899.peg.1398
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229899.peg.1221
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229899.peg.2356
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229899.peg.1811
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229899.peg.2312
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229899.peg.2313
Biotin_synthesis_cluster	tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)	fig|6666666.229899.peg.1790
Biphenyl_Degradation	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229899.peg.450
Broadly_distributed_proteins_not_in_subsystems	FIG001943: hypothetical protein YajQ	fig|6666666.229899.peg.748
Broadly_distributed_proteins_not_in_subsystems	FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster	fig|6666666.229899.peg.273
Broadly_distributed_proteins_not_in_subsystems	UPF0225 protein YchJ	fig|6666666.229899.peg.1051
Broadly_distributed_proteins_not_in_subsystems	UPF0265 protein YeeX	fig|6666666.229899.peg.418
Broadly_distributed_proteins_not_in_subsystems	YciL protein	fig|6666666.229899.peg.1656
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.229899.peg.684
Broadly_distributed_proteins_not_in_subsystems	YrbA protein	fig|6666666.229899.peg.569
Butanol_Biosynthesis	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229899.peg.450
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229899.peg.786
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229899.peg.450
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229899.peg.1678
Butanol_Biosynthesis	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229899.peg.613
Butanol_Biosynthesis	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229899.peg.625
CBSS-12149.1.peg.3301	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229899.peg.570
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, ATP-binding protein YrbF	fig|6666666.229899.peg.564
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, auxiliary component YrbC	fig|6666666.229899.peg.567
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, periplasmic component YrbD	fig|6666666.229899.peg.566
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, permease component YrbE	fig|6666666.229899.peg.565
CBSS-12149.1.peg.3301	Uncharacterized protein YrbB	fig|6666666.229899.peg.568
CBSS-12149.1.peg.3301	YrbA protein	fig|6666666.229899.peg.569
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229899.peg.292
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229899.peg.293
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229899.peg.291
CBSS-160492.1.peg.550	21 kDa hemolysin precursor	fig|6666666.229899.peg.379
CBSS-160492.1.peg.550	LppC putative lipoprotein	fig|6666666.229899.peg.376
CBSS-160492.1.peg.550	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229899.peg.378
CBSS-160492.1.peg.550	Predicted endonuclease distantly related to archaeal Holliday junction resolvase	fig|6666666.229899.peg.377
CBSS-160492.1.peg.550	rRNA small subunit methyltransferase I	fig|6666666.229899.peg.375
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229899.peg.1946
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229899.peg.1950
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229899.peg.1949
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.229899.peg.1109
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.229899.peg.1592
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.229899.peg.1111
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.229899.peg.1593
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.229899.peg.629
CBSS-176299.4.peg.1292	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.229899.peg.1593
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229899.peg.628
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229899.peg.627
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.229899.peg.299
CBSS-196164.1.peg.461	Hypothetical, related to broad specificity phosphatases COG0406	fig|6666666.229899.peg.2249
CBSS-208964.1.peg.3826	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229899.peg.205
CBSS-208964.1.peg.3826	DNA polymerase III chi subunit (EC 2.7.7.7)	fig|6666666.229899.peg.480
CBSS-208964.1.peg.3826	FIG000906: Predicted Permease	fig|6666666.229899.peg.207
CBSS-208964.1.peg.3826	FIG000988: Predicted permease	fig|6666666.229899.peg.206
CBSS-208964.1.peg.3826	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229899.peg.478
CBSS-208964.1.peg.3988	DNA polymerase III delta subunit (EC 2.7.7.7)	fig|6666666.229899.peg.1165
CBSS-208964.1.peg.3988	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229899.peg.1166
CBSS-208964.1.peg.3988	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229899.peg.1168
CBSS-211586.1.peg.1979	FIG001881: hydrolase of alkaline phosphatase superfamily	fig|6666666.229899.peg.1060
CBSS-211586.1.peg.1979	FIG002927: hypothetical protein	fig|6666666.229899.peg.1059
CBSS-211586.1.peg.1979	Nucleoid-associated protein NdpA	fig|6666666.229899.peg.1058
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229899.peg.445
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229899.peg.446
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229899.peg.447
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229899.peg.441
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229899.peg.444
CBSS-211586.9.peg.2729	Acyl-CoA thioesterase YciA, involved in membrane biogenesis	fig|6666666.229899.peg.1655
CBSS-211586.9.peg.2729	Intracellular septation protein IspA	fig|6666666.229899.peg.1654
CBSS-211586.9.peg.2729	YciL protein	fig|6666666.229899.peg.1656
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229899.peg.1684
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.5
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.6
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.7
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.675
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.1336
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.1337
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.229899.peg.588
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229899.peg.1398
CBSS-216591.1.peg.168	Histone acetyltransferase HPA2 and related acetyltransferases	fig|6666666.229899.peg.1476
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229899.peg.2150
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229899.peg.2151
CBSS-221988.1.peg.1679	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229899.peg.1483
CBSS-221988.1.peg.1679	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229899.peg.1485
CBSS-221988.1.peg.1679	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229899.peg.1486
CBSS-221988.1.peg.1679	FIG003021: Membrane protein	fig|6666666.229899.peg.1490
CBSS-221988.1.peg.1679	Pantothenate:Na+ symporter (TC 2.A.21.1.1)	fig|6666666.229899.peg.1491
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229899.peg.814
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229899.peg.815
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229899.peg.816
CBSS-224911.1.peg.435	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229899.peg.1887
CBSS-224911.1.peg.435	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229899.peg.1784
CBSS-224911.1.peg.435	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229899.peg.1785
CBSS-228400.4.peg.1623	FIG001587: exported protein	fig|6666666.229899.peg.2068
CBSS-228400.4.peg.1623	Hypothetical metal-binding enzyme, YcbL homolog	fig|6666666.229899.peg.2069
CBSS-228400.4.peg.1623	L,D-transpeptidase YcbB	fig|6666666.229899.peg.2067
CBSS-228410.1.peg.134	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.229899.peg.427
CBSS-228410.1.peg.134	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229899.peg.350
CBSS-228410.1.peg.134	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229899.peg.349
CBSS-228410.1.peg.134	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229899.peg.426
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229899.peg.1009
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229899.peg.1017
CBSS-243265.1.peg.198	Transcription elongation factor GreB	fig|6666666.229899.peg.1018
CBSS-243277.1.peg.4359	Protein YcgL	fig|6666666.229899.peg.2154
CBSS-243277.1.peg.4359	YcgN (Fragment)	fig|6666666.229899.peg.2265
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229899.peg.1227
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229899.peg.264
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.229899.peg.325
CBSS-262728.1.peg.1737	Aspartate--ammonia ligase (EC 6.3.1.1)	fig|6666666.229899.peg.793
CBSS-262728.1.peg.1737	Regulatory protein AsnC	fig|6666666.229899.peg.794
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229899.peg.1569
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229899.peg.907
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229899.peg.589
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229899.peg.1569
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229899.peg.907
CBSS-269801.1.peg.2186	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	fig|6666666.229899.peg.83
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229899.peg.11
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229899.peg.894
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229899.peg.532
CBSS-290633.1.peg.1906	Mlr7403 protein	fig|6666666.229899.peg.709
CBSS-291331.3.peg.3674	FIG026291: Hypothetical periplasmic protein	fig|6666666.229899.peg.482
CBSS-292415.3.peg.2341	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229899.peg.349
CBSS-296591.1.peg.2330	Nucleoside-diphosphate-sugar epimerases	fig|6666666.229899.peg.160
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229899.peg.401
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229899.peg.1328
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229899.peg.2118
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229899.peg.301
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229899.peg.1106
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229899.peg.1108
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229899.peg.982
CBSS-312309.3.peg.1965	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.229899.peg.300
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229899.peg.797
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229899.peg.1925
CBSS-316057.3.peg.1308	DNA-directed RNA polymerase specialized sigma subunit, sigma24-like	fig|6666666.229899.peg.1020
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.229899.peg.155
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229899.peg.580
CBSS-316275.9.peg.382	FIG001826: putative inner membrane protein	fig|6666666.229899.peg.1211
CBSS-316275.9.peg.382	FIG023911: putative membrane protein	fig|6666666.229899.peg.1212
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229899.peg.219
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229899.peg.219
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.229899.peg.1772
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.229899.peg.1591
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.229899.peg.1103
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229899.peg.931
CBSS-323850.3.peg.3269	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229899.peg.1389
CBSS-323850.3.peg.3269	Tyrosine recombinase XerC	fig|6666666.229899.peg.1388
CBSS-326442.4.peg.1852	ABC-type polar amino acid transport system, ATPase component	fig|6666666.229899.peg.1248
CBSS-326442.4.peg.1852	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229899.peg.1062
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.229899.peg.933
CBSS-326442.4.peg.1852	Putative TEGT family carrier/transport protein	fig|6666666.229899.peg.2029
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229899.peg.2056
CBSS-326442.4.peg.1852	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229899.peg.2028
CBSS-326442.4.peg.1852	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229899.peg.1250
CBSS-326442.4.peg.1852	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229899.peg.1251
CBSS-326442.4.peg.1852	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229899.peg.2328
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229899.peg.1662
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229899.peg.1477
CBSS-339671.5.peg.589	Cell division protein BolA	fig|6666666.229899.peg.1088
CBSS-339671.5.peg.589	Hypothetical lipoprotein YajG precursor	fig|6666666.229899.peg.1089
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.229899.peg.427
CBSS-342610.3.peg.1536	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229899.peg.350
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229899.peg.349
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229899.peg.426
CBSS-342610.3.peg.1794	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.229899.peg.1683
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229899.peg.1684
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229899.peg.365
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229899.peg.764
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229899.peg.765
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229899.peg.526
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229899.peg.887
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229899.peg.886
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229899.peg.509
CBSS-354.1.peg.876	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229899.peg.1180
CBSS-354.1.peg.876	FIG002903: a protein of unknown function perhaps involved in purine metabolism	fig|6666666.229899.peg.1179
CBSS-354.1.peg.876	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229899.peg.1644
CBSS-364106.7.peg.3204	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229899.peg.1887
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.229899.peg.423
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229899.peg.739
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229899.peg.2102
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229899.peg.758
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229899.peg.573
CBSS-393130.3.peg.794	Rhodanese-like domain required for thiamine synthesis	fig|6666666.229899.peg.71
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229899.peg.826
CBSS-393130.3.peg.794	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229899.peg.71
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229899.peg.1773
CBSS-498211.3.peg.1415	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229899.peg.707
CBSS-498211.3.peg.1415	FIG021952: putative membrane protein	fig|6666666.229899.peg.706
CBSS-498211.3.peg.1415	GTP-binding protein EngA	fig|6666666.229899.peg.532
CBSS-498211.3.peg.1415	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229899.peg.708
CBSS-498211.3.peg.1415	Mlr7403 protein	fig|6666666.229899.peg.709
CBSS-498211.3.peg.1415	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229899.peg.1619
CBSS-498211.3.peg.1415	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229899.peg.704
CBSS-498211.3.peg.1415	Type IV pilus biogenesis protein PilF	fig|6666666.229899.peg.705
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1188
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1624
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1777
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229899.peg.1717
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229899.peg.1718
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229899.peg.1718
CBSS-584.1.peg.1352	FIG009095: D,D-carboxypeptidase family protein	fig|6666666.229899.peg.1685
CBSS-584.1.peg.1352	FIG138056: a glutathione-dependent thiol reductase	fig|6666666.229899.peg.1687
CBSS-584.1.peg.1352	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229899.peg.1686
CBSS-584.1.peg.3382	33 kDa chaperonin (Heat shock protein 33) (HSP33)	fig|6666666.229899.peg.851
CBSS-584.1.peg.3382	FIG001957: putative hydrolase	fig|6666666.229899.peg.853
CBSS-584.1.peg.3382	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229899.peg.1032
CBSS-584.1.peg.3382	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229899.peg.852
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229899.peg.585
CBSS-630.2.peg.3360	Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock)	fig|6666666.229899.peg.867
CBSS-630.2.peg.3360	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229899.peg.598
CBSS-630.2.peg.3360	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229899.peg.733
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229899.peg.979
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229899.peg.707
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229899.peg.1702
CBSS-83331.1.peg.3039	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229899.peg.976
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229899.peg.1235
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229899.peg.978
CBSS-83333.1.peg.2911	FIG002060: uncharacterized protein YggL	fig|6666666.229899.peg.1095
CBSS-83333.1.peg.2911	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229899.peg.1094
CBSS-83333.1.peg.876	Cell division protein FtsK	fig|6666666.229899.peg.2052
CBSS-83333.1.peg.876	FIG065221: Holliday junction DNA helicase	fig|6666666.229899.peg.2054
CBSS-83333.1.peg.876	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229899.peg.2053
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.229899.peg.188
CBSS-83333.1.peg.946	DNA transformation protein TfoX	fig|6666666.229899.peg.1345
CBSS-83333.1.peg.946	Inner membrane protein YccF	fig|6666666.229899.peg.2020
CBSS-83333.1.peg.946	Methylglyoxal synthase (EC 4.2.3.3)	fig|6666666.229899.peg.2021
CBSS-83333.1.peg.946	Putative efflux (PET) family inner membrane protein YccS	fig|6666666.229899.peg.2019
CBSS-83333.1.peg.946	UPF0319 protein YccT precursor	fig|6666666.229899.peg.2022
CBSS-87626.3.peg.3639	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-)	fig|6666666.229899.peg.1953
CBSS-87626.3.peg.3639	FIG001590: Putative conserved exported protein precursor	fig|6666666.229899.peg.879
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229899.peg.880
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229899.peg.809
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229899.peg.810
CO2_uptake,_carboxysome	RuBisCO operon transcriptional regulator	fig|6666666.229899.peg.1013
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.229899.peg.154
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.229899.peg.2030
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.229899.peg.2031
CRISPRs	CRISPR-associated helicase Cas3, Yersinia-type	fig|6666666.229899.peg.462
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229899.peg.147
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229899.peg.150
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229899.peg.463
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229899.peg.2042
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229899.peg.146
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229899.peg.2044
CRISPRs	CRISPR-associated protein, Cas5d family	fig|6666666.229899.peg.153
CRISPRs	CRISPR-associated protein, Cas5d family	fig|6666666.229899.peg.2038
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229899.peg.152
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229899.peg.2039
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229899.peg.2040
CRISPRs	CRISPR-associated protein, Csd2 family	fig|6666666.229899.peg.151
CRISPRs	CRISPR-associated protein, Csd2 family	fig|6666666.229899.peg.2041
CRISPRs	CRISPR-associated protein, Csy1 family	fig|6666666.229899.peg.458
CRISPRs	CRISPR-associated protein, Csy2 family	fig|6666666.229899.peg.459
CRISPRs	CRISPR-associated protein, Csy3 family	fig|6666666.229899.peg.460
CRISPRs	CRISPR-associated protein, Csy4 family	fig|6666666.229899.peg.461
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229899.peg.1402
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229899.peg.631
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229899.peg.1267
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229899.peg.546
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.229899.peg.917
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229899.peg.1590
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229899.peg.916
Calvin-Benson_cycle	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229899.peg.732
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229899.peg.1607
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.229899.peg.1458
Calvin-Benson_cycle	Transketolase, C-terminal section (EC 2.2.1.1)	fig|6666666.229899.peg.2016
Calvin-Benson_cycle	Transketolase, N-terminal section (EC 2.2.1.1)	fig|6666666.229899.peg.2015
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229899.peg.1477
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229899.peg.537
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229899.peg.538
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229899.peg.1096
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229899.peg.2296
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229899.peg.104
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229899.peg.539
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229899.peg.1097
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229899.peg.2297
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229899.peg.1189
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229899.peg.1191
Campylobacter_Iron_Metabolism	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229899.peg.305
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.229899.peg.866
Campylobacter_Iron_Metabolism	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229899.peg.306
Capsular_heptose_biosynthesis	D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-)	fig|6666666.229899.peg.1795
Capsular_heptose_biosynthesis	GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	fig|6666666.229899.peg.1330
Capsular_heptose_biosynthesis	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229899.peg.378
Capsular_heptose_biosynthesis	Phosphoheptose isomerase 1 (EC 5.3.1.-)	fig|6666666.229899.peg.1711
Carbon_Starvation	Carbon starvation protein A	fig|6666666.229899.peg.1706
Carbon_Starvation	Carbon storage regulator	fig|6666666.229899.peg.1066
Carbon_Starvation	Starvation lipoprotein Slp paralog	fig|6666666.229899.peg.2311
Carbon_Starvation	Stringent starvation protein A	fig|6666666.229899.peg.2352
Carbon_Starvation	Stringent starvation protein B	fig|6666666.229899.peg.2353
Carbon_storage_regulator	Carbon storage regulator	fig|6666666.229899.peg.1066
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.229899.peg.2250
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229899.peg.2245
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229899.peg.2245
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229899.peg.636
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229899.peg.711
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229899.peg.130
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229899.peg.927
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229899.peg.637
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229899.peg.638
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229899.peg.630
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229899.peg.631
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229899.peg.634
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229899.peg.632
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229899.peg.633
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229899.peg.1275
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229899.peg.1270
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229899.peg.1608
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229899.peg.107
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229899.peg.1554
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229899.peg.749
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229899.peg.852
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229899.peg.137
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229899.peg.1009
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229899.peg.1017
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229899.peg.1712
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229899.peg.398
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229899.peg.1618
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229899.peg.328
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.229899.peg.327
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family	fig|6666666.229899.peg.347
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229899.peg.336
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229899.peg.351
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229899.peg.352
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229899.peg.336
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229899.peg.351
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229899.peg.352
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229899.peg.336
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229899.peg.351
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229899.peg.352
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)	fig|6666666.229899.peg.584
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.229899.peg.583
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229899.peg.2224
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229899.peg.2383
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.229899.peg.2385
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.229899.peg.2386
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229899.peg.2380
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229899.peg.2226
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229899.peg.2225
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229899.peg.2380
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229899.peg.2368
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229899.peg.2369
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229899.peg.2275
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229899.peg.1483
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229899.peg.1146
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229899.peg.425
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229899.peg.250
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229899.peg.1689
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229899.peg.123
Chorismate_Synthesis	Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229899.peg.250
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.229899.peg.1689
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229899.peg.996
Chorismate_Synthesis	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.229899.peg.209
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229899.peg.1145
Cinnamic_Acid_Degradation	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229899.peg.450
Citrate_Metabolism,_Transport,_and_Regulation	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25)	fig|6666666.229899.peg.1630
Citrate_Metabolism,_Transport,_and_Regulation	C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)	fig|6666666.229899.peg.389
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase alpha chain (EC 4.1.3.6)	fig|6666666.229899.peg.1629
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.229899.peg.1628
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	fig|6666666.229899.peg.1627
Citrate_Metabolism,_Transport,_and_Regulation	[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	fig|6666666.229899.peg.1626
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.229899.peg.844
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.229899.peg.842
Cluster_Ytf_and_putative_sugar_transporter	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229899.peg.546
Cluster_Ytf_and_putative_sugar_transporter	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229899.peg.381
Cluster_Ytf_and_putative_sugar_transporter	Uncharacterized protein YtfM precursor	fig|6666666.229899.peg.1029
Cluster_Ytf_and_putative_sugar_transporter	Uncharacterized protein YtfN	fig|6666666.229899.peg.1030
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229899.peg.1065
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229899.peg.1772
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.229899.peg.1073
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229899.peg.996
Cluster_containing_Glutathione_synthetase	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229899.peg.2339
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.229899.peg.1073
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229899.peg.1071
Cluster_containing_Glutathione_synthetase	UPF0301 protein YqgE	fig|6666666.229899.peg.1072
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229899.peg.621
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.229899.peg.423
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229899.peg.1116
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229899.peg.1117
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229899.peg.1182
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229899.peg.1502
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.229899.peg.999
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.229899.peg.926
Coenzyme_A_Biosynthesis	Pantothenate:Na+ symporter (TC 2.A.21.1.1)	fig|6666666.229899.peg.1491
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229899.peg.907
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.229899.peg.1132
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.229899.peg.1132
Coenzyme_B12_biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229899.peg.1024
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229899.peg.2333
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229899.peg.2340
Coenzyme_F420_hydrogenase	Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.229899.peg.2081
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.5
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.6
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.7
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.675
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.1336
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.1337
Colanic_acid_biosynthesis	GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	fig|6666666.229899.peg.1330
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.229899.peg.1881
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspD	fig|6666666.229899.peg.89
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229899.peg.2275
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229899.peg.1483
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229899.peg.1146
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229899.peg.425
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229899.peg.123
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229899.peg.996
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.229899.peg.209
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229899.peg.1145
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Transcriptional repressor protein TrpR	fig|6666666.229899.peg.1658
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Transcriptional repressor protein TyrR	fig|6666666.229899.peg.2176
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176)	fig|6666666.229899.peg.808
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229899.peg.1977
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229899.peg.11
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229899.peg.1119
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229899.peg.809
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229899.peg.810
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229899.peg.969
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229899.peg.704
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229899.peg.1990
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229899.peg.1607
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229899.peg.894
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Similar to C-terminal Zn-finger domain of DNA topoisomerase I	fig|6666666.229899.peg.994
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229899.peg.807
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229899.peg.2310
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229899.peg.761
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229899.peg.1801
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229899.peg.1264
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229899.peg.181
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229899.peg.1517
Copper_homeostasis	Copper chaperone	fig|6666666.229899.peg.1518
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229899.peg.1517
Copper_homeostasis	Cu(I)-responsive transcriptional regulator	fig|6666666.229899.peg.1519
Copper_homeostasis	Cytochrome c heme lyase subunit CcmF	fig|6666666.229899.peg.655
Copper_homeostasis	Cytochrome c heme lyase subunit CcmH	fig|6666666.229899.peg.652
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.229899.peg.1623
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1188
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1624
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1777
Creatine_and_Creatinine_Degradation	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229899.peg.1062
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.229899.peg.380
Cysteine_Biosynthesis	Cys regulon transcriptional activator CysB	fig|6666666.229899.peg.247
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.229899.peg.754
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229899.peg.1264
Cysteine_Biosynthesis	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.229899.peg.2298
Cysteine_Biosynthesis	Sulfate transporter, CysZ-type	fig|6666666.229899.peg.755
CytR_regulation	Cyclic AMP receptor protein	fig|6666666.229899.peg.1136
Cytolethal_distending_toxin_of_Campylobacter_jejuni	Cytolethal distending toxin subunit A	fig|6666666.229899.peg.2195
Cytolethal_distending_toxin_of_Campylobacter_jejuni	Cytolethal distending toxin subunit B	fig|6666666.229899.peg.2196
Cytolethal_distending_toxin_of_Campylobacter_jejuni	Cytolethal distending toxin subunit C	fig|6666666.229899.peg.2197
Cytolethal_distending_toxins	Cytolethal distending toxin subunit A	fig|6666666.229899.peg.2195
Cytolethal_distending_toxins	Cytolethal distending toxin subunit B	fig|6666666.229899.peg.2196
Cytolethal_distending_toxins	Cytolethal distending toxin subunit C	fig|6666666.229899.peg.2197
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229899.peg.726
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229899.peg.729
D-Galacturonate_and_D-Glucuronate_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.229899.peg.722
D-Galacturonate_and_D-Glucuronate_Utilization	D-mannonate oxidoreductase (EC 1.1.1.57)	fig|6666666.229899.peg.727
D-Galacturonate_and_D-Glucuronate_Utilization	Hexuronate utilization operon transcriptional repressor ExuR	fig|6666666.229899.peg.721
D-Galacturonate_and_D-Glucuronate_Utilization	Mannonate dehydratase (EC 4.2.1.8)	fig|6666666.229899.peg.720
D-Galacturonate_and_D-Glucuronate_Utilization	Uronate isomerase (EC 5.3.1.12)	fig|6666666.229899.peg.728
D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization	Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	fig|6666666.229899.peg.1181
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	D-glycerate transporter (predicted)	fig|6666666.229899.peg.1552
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.1553
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.2187
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Sugar diacid utilization regulator SdaR	fig|6666666.229899.peg.1551
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	D-glycerate transporter (predicted)	fig|6666666.229899.peg.1552
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.1553
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.2187
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Sugar diacid utilization regulator SdaR	fig|6666666.229899.peg.1551
D-gluconate_and_ketogluconates_metabolism	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229899.peg.726
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.229899.peg.864
D-gluconate_and_ketogluconates_metabolism	Gluconate utilization system Gnt-I transcriptional repressor	fig|6666666.229899.peg.2098
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.229899.peg.2100
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.229899.peg.1764
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.229899.peg.1765
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.229899.peg.2101
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.229899.peg.1882
D-ribose_utilization	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229899.peg.732
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229899.peg.1006
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229899.peg.1885
D-ribose_utilization	Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)	fig|6666666.229899.peg.1886
D-ribose_utilization	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	fig|6666666.229899.peg.1005
D-ribose_utilization	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	fig|6666666.229899.peg.1883
D-ribose_utilization	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	fig|6666666.229899.peg.1007
D-ribose_utilization	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	fig|6666666.229899.peg.1884
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229899.peg.758
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229899.peg.1415
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.229899.peg.933
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229899.peg.181
DNA_Repair_Base_Excision	Exodeoxyribonuclease I (EC 3.1.11.1)	fig|6666666.229899.peg.36
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.229899.peg.1127
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229899.peg.221
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.229899.peg.624
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229899.peg.130
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229899.peg.927
DNA_ligases	DNA ligase (ATP) (EC 6.5.1.1)	fig|6666666.229899.peg.2103
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229899.peg.118
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229899.peg.1663
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.229899.peg.1665
DNA_processing_cluster	Protein involved in catabolism of external DNA	fig|6666666.229899.peg.1138
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229899.peg.1664
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229899.peg.1156
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229899.peg.360
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229899.peg.275
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.229899.peg.1093
DNA_repair,_bacterial	DNA mismatch repair endonuclease MutH	fig|6666666.229899.peg.574
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229899.peg.2160
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.229899.peg.993
DNA_repair,_bacterial	DNA recombination-dependent growth factor C	fig|6666666.229899.peg.599
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229899.peg.406
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229899.peg.2050
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229899.peg.1130
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229899.peg.1650
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229899.peg.391
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.229899.peg.2116
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229899.peg.557
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229899.peg.2246
DNA_repair,_bacterial	Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	fig|6666666.229899.peg.1147
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229899.peg.573
DNA_repair,_bacterial	RecA protein	fig|6666666.229899.peg.1455
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.229899.peg.900
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229899.peg.1155
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229899.peg.2309
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229899.peg.2180
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229899.peg.1758
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	fig|6666666.229899.peg.83
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V beta chain (EC 3.1.11.5)	fig|6666666.229899.peg.84
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)	fig|6666666.229899.peg.1989
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229899.peg.928
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229899.peg.638
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229899.peg.1109
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.229899.peg.1455
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229899.peg.1664
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229899.peg.1155
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229899.peg.221
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.229899.peg.1455
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.229899.peg.900
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase Rep	fig|6666666.229899.peg.1418
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229899.peg.2102
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229899.peg.1758
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.229899.peg.1455
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.229899.peg.1456
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229899.peg.969
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229899.peg.636
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229899.peg.711
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229899.peg.130
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229899.peg.927
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229899.peg.637
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229899.peg.638
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229899.peg.852
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.229899.peg.1161
DNA_structural_proteins,_bacterial	Chromosome partition protein MukB	fig|6666666.229899.peg.38
DNA_structural_proteins,_bacterial	Chromosome partition protein MukE	fig|6666666.229899.peg.39
DNA_structural_proteins,_bacterial	Chromosome partition protein MukF	fig|6666666.229899.peg.42
DNA_structural_proteins,_bacterial	DNA-binding protein Fis	fig|6666666.229899.peg.1495
DNA_structural_proteins,_bacterial	DNA-binding protein HU-alpha	fig|6666666.229899.peg.1038
DNA_structural_proteins,_bacterial	Integration host factor alpha subunit	fig|6666666.229899.peg.2393
DNA_structural_proteins,_bacterial	Integration host factor beta subunit	fig|6666666.229899.peg.136
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229899.peg.11
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229899.peg.1663
DNA_topoisomerases,_Type_I,_ATP-independent	Similar to C-terminal Zn-finger domain of DNA topoisomerase I	fig|6666666.229899.peg.994
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229899.peg.130
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229899.peg.927
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229899.peg.368
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229899.peg.365
DNA_uptake_cluster	Competence protein A	fig|6666666.229899.peg.1140
DNA_uptake_cluster	Competence protein B	fig|6666666.229899.peg.1141
DNA_uptake_cluster	Competence protein C	fig|6666666.229899.peg.1142
DNA_uptake_cluster	Competence protein D	fig|6666666.229899.peg.1143
DNA_uptake_cluster	Competence protein E	fig|6666666.229899.peg.1144
DNA_uptake_cluster	DNA-binding protein HU-alpha	fig|6666666.229899.peg.1038
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229899.peg.304
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229899.peg.506
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229899.peg.1139
DNA_uptake_cluster	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.229899.peg.1035
DNA_uptake_cluster	NfuA Fe-S protein maturation	fig|6666666.229899.peg.1399
DNA_uptake_cluster	Protein involved in catabolism of external DNA	fig|6666666.229899.peg.1138
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.229899.peg.9
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229899.peg.1101
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229899.peg.133
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.229899.peg.1177
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229899.peg.713
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229899.peg.714
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229899.peg.1177
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.229899.peg.46
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.229899.peg.2071
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229899.peg.205
Dehydrogenase_complexes	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229899.peg.255
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.229899.peg.2072
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229899.peg.256
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose operon repressor, DeoR family	fig|6666666.229899.peg.1290
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229899.peg.1291
Deoxyribose_and_Deoxynucleoside_Catabolism	Na+ dependent nucleoside transporter NupC	fig|6666666.229899.peg.1574
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229899.peg.1575
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.229899.peg.1805
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.229899.peg.1882
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.229899.peg.230
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.229899.peg.1910
Dipeptidases_(EC_3.4.13.-)	Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21)	fig|6666666.229899.peg.70
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229899.peg.936
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229899.peg.1024
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229899.peg.726
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229899.peg.729
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.229899.peg.861
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229899.peg.1074
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.229899.peg.2100
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.229899.peg.860
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229899.peg.1590
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229899.peg.916
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229899.peg.1015
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229899.peg.1782
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229899.peg.2365
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229899.peg.264
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229899.peg.265
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229899.peg.786
Exopolysaccharide_Biosynthesis	Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6)	fig|6666666.229899.peg.1333
F0F1-type_ATP_synthase	ATP synthase F0 sector subunit b (EC 3.6.3.14)	fig|6666666.229899.peg.1279
F0F1-type_ATP_synthase	ATP synthase F0 sector subunit c (EC 3.6.3.14)	fig|6666666.229899.peg.1278
F0F1-type_ATP_synthase	ATP synthase alpha chain (EC 3.6.3.14)	fig|6666666.229899.peg.1281
F0F1-type_ATP_synthase	ATP synthase beta chain (EC 3.6.3.14)	fig|6666666.229899.peg.1283
F0F1-type_ATP_synthase	ATP synthase delta chain (EC 3.6.3.14)	fig|6666666.229899.peg.1280
F0F1-type_ATP_synthase	ATP synthase epsilon chain (EC 3.6.3.14)	fig|6666666.229899.peg.1284
F0F1-type_ATP_synthase	ATP synthase gamma chain (EC 3.6.3.14)	fig|6666666.229899.peg.1282
F0F1-type_ATP_synthase	FIG048548: ATP synthase protein I2	fig|6666666.229899.peg.1276
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59)	fig|6666666.229899.peg.86
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229899.peg.972
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229899.peg.1227
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)	fig|6666666.229899.peg.1643
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.229899.peg.1225
Fatty_Acid_Biosynthesis_FASII	4'-phosphopantetheinyl transferase (EC 2.7.8.-)	fig|6666666.229899.peg.592
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.229899.peg.396
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229899.peg.2247
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.229899.peg.1228
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229899.peg.1485
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229899.peg.1486
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)	fig|6666666.229899.peg.467
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.229899.peg.1226
Fermentations:_Lactate	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229899.peg.450
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229899.peg.264
Fermentations:_Lactate	D-lactate dehydrogenase (EC 1.1.1.28)	fig|6666666.229899.peg.1924
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229899.peg.265
Fermentations:_Mixed_acid	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229899.peg.450
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229899.peg.264
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229899.peg.450
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229899.peg.1678
Fermentations:_Mixed_acid	D-lactate dehydrogenase (EC 1.1.1.28)	fig|6666666.229899.peg.1924
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.229899.peg.614
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229899.peg.265
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229899.peg.613
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229899.peg.625
Fermentations:_Mixed_acid	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	fig|6666666.229899.peg.612
Fermentations:_Mixed_acid	Sugar/maltose fermentation stimulation protein homolog	fig|6666666.229899.peg.287
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229899.peg.765
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229899.peg.1702
Flavodoxin	Flavodoxin 1	fig|6666666.229899.peg.128
Flavodoxin	Flavodoxin 2	fig|6666666.229899.peg.1740
Flavodoxin	Flavodoxin 2	fig|6666666.229899.peg.2321
Flavodoxin	Flavoprotein MioC	fig|6666666.229899.peg.1269
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.229899.peg.1740
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.229899.peg.2321
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.229899.peg.267
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229899.peg.877
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229899.peg.2224
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.229899.peg.1210
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229899.peg.2248
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.229899.peg.681
Folate_Biosynthesis	Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB)	fig|6666666.229899.peg.1969
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.229899.peg.2159
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229899.peg.2248
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229899.peg.2135
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229899.peg.2226
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229899.peg.2225
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.229899.peg.1890
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.229899.peg.267
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229899.peg.107
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.229899.peg.681
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.229899.peg.2159
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229899.peg.2135
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229899.peg.1554
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229899.peg.398
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229899.peg.2077
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229899.peg.2078
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229899.peg.2079
Formate_dehydrogenase	Formate dehydrogenase N alpha subunit (EC 1.2.1.2)	fig|6666666.229899.peg.2096
Formate_dehydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.229899.peg.2095
Formate_hydrogenase	Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)	fig|6666666.229899.peg.2094
Formate_hydrogenase	Formate dehydrogenase N alpha subunit (EC 1.2.1.2)	fig|6666666.229899.peg.2096
Formate_hydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.229899.peg.2095
Formate_hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.229899.peg.2097
Formate_hydrogenase	Formate hydrogenlyase subunit 3	fig|6666666.229899.peg.2090
Formate_hydrogenase	Formate hydrogenlyase subunit 5	fig|6666666.229899.peg.2085
Formate_hydrogenase	Formate hydrogenlyase subunit 6	fig|6666666.229899.peg.2084
Formate_hydrogenase	Formate hydrogenlyase subunit 7	fig|6666666.229899.peg.2083
Formate_hydrogenase	Formate hydrogenlyase transcriptional activator	fig|6666666.229899.peg.2082
Formate_hydrogenase	Hydrogenase-4 component B (EC 1.-.-.-)	fig|6666666.229899.peg.2090
Formate_hydrogenase	Hydrogenase-4 component C (EC 1.-.-.-)	fig|6666666.229899.peg.2089
Formate_hydrogenase	Hydrogenase-4 component D (EC 1.-.-.-)	fig|6666666.229899.peg.2088
Formate_hydrogenase	Hydrogenase-4 component E (EC 1.-.-.-)	fig|6666666.229899.peg.2087
Formate_hydrogenase	formate dehydrogenase formation protein FdhE	fig|6666666.229899.peg.170
Fructose_utilization	1-phosphofructokinase (EC 2.7.1.56)	fig|6666666.229899.peg.1745
Fructose_utilization	Fructose repressor FruR, LacI family	fig|6666666.229899.peg.240
Fructose_utilization	Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69)	fig|6666666.229899.peg.1746
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.229899.peg.1746
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.229899.peg.1744
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.229899.peg.1744
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229899.peg.2211
Fructose_utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229899.peg.2210
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.229899.peg.1459
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229899.peg.803
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HybG	fig|6666666.229899.peg.2378
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.229899.peg.212
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.229899.peg.211
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.229899.peg.2092
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229899.peg.213
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229899.peg.487
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229899.peg.1818
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.5
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.6
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.7
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.675
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.1336
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.1337
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229899.peg.1318
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate--ammonia ligase (EC 6.3.1.1)	fig|6666666.229899.peg.793
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229899.peg.1596
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229899.peg.431
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229899.peg.576
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.229899.peg.702
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system	fig|6666666.229899.peg.2051
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229899.peg.1818
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229899.peg.576
Glutaredoxin_3_containing_cluster	FIG136845: Rhodanese-related sulfurtransferase	fig|6666666.229899.peg.1261
Glutaredoxin_3_containing_cluster	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229899.peg.1263
Glutaredoxin_3_containing_cluster	Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state)	fig|6666666.229899.peg.1262
Glutaredoxins	Cell wall endopeptidase, family M23/M37	fig|6666666.229899.peg.177
Glutaredoxins	Glutaredoxin 1	fig|6666666.229899.peg.486
Glutaredoxins	Glutaredoxin 2	fig|6666666.229899.peg.525
Glutaredoxins	Glutaredoxin-related protein	fig|6666666.229899.peg.320
Glutaredoxins	Glutaredoxin-related protein	fig|6666666.229899.peg.1408
Glutaredoxins	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229899.peg.1784
Glutathione-dependent_pathway_of_formaldehyde_detoxification	S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284)	fig|6666666.229899.peg.1183
Glutathione-dependent_pathway_of_formaldehyde_detoxification	S-formylglutathione hydrolase (EC 3.1.2.12)	fig|6666666.229899.peg.1184
Glutathione-regulated_potassium-efflux_system_and_associated_functions	Glutathione-regulated potassium-efflux system ATP-binding protein	fig|6666666.229899.peg.1454
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229899.peg.163
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3)	fig|6666666.229899.peg.1508
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229899.peg.2339
Glutathione:_Non-redox_reactions	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229899.peg.350
Glutathione:_Non-redox_reactions	Glutathione S-transferase (EC 2.5.1.18)	fig|6666666.229899.peg.369
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229899.peg.349
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229899.peg.1959
Glutathione:_Redox_cycle	Glutaredoxin 1	fig|6666666.229899.peg.486
Glutathione:_Redox_cycle	Glutaredoxin 2	fig|6666666.229899.peg.525
Glutathione:_Redox_cycle	Glutathione reductase (EC 1.8.1.7)	fig|6666666.229899.peg.1137
Glutathionylspermidine_and_Trypanothione	Glutathionylspermidine amidohydrolase (EC 3.5.1.78)	fig|6666666.229899.peg.1358
Glutathionylspermidine_and_Trypanothione	Glutathionylspermidine synthase (EC 6.3.1.8)	fig|6666666.229899.peg.1358
Glycerate_metabolism	D-glycerate transporter (predicted)	fig|6666666.229899.peg.1552
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.1553
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.2187
Glycerate_metabolism	Hydroxypyruvate isomerase (EC 5.3.1.22)	fig|6666666.229899.peg.1766
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.229899.peg.2227
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229899.peg.2365
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229899.peg.609
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229899.peg.966
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229899.peg.1228
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein (ACP1)	fig|6666666.229899.peg.1383
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein (ACP2)	fig|6666666.229899.peg.1382
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY	fig|6666666.229899.peg.682
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229899.peg.450
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229899.peg.1678
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229899.peg.523
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229899.peg.967
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8)	fig|6666666.229899.peg.912
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.229899.peg.2250
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Diacylglycerol kinase (EC 2.7.1.107)	fig|6666666.229899.peg.1112
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.1553
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.2187
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)	fig|6666666.229899.peg.901
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229899.peg.374
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229899.peg.1263
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphate:acyl-ACP acyltransferase PlsX	fig|6666666.229899.peg.1224
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229899.peg.965
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229899.peg.977
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylglycerophosphatase A (EC 3.1.3.27)	fig|6666666.229899.peg.2284
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylglycerophosphatase B (EC 3.1.3.27)	fig|6666666.229899.peg.2121
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylserine decarboxylase (EC 4.1.1.65)	fig|6666666.229899.peg.1216
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229899.peg.1996
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229899.peg.731
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.1553
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.2187
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229899.peg.701
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229899.peg.701
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229899.peg.420
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229899.peg.747
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229899.peg.1996
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.229899.peg.700
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229899.peg.2056
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229899.peg.1925
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229899.peg.2131
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229899.peg.51
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229899.peg.52
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229899.peg.260
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229899.peg.49
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229899.peg.50
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229899.peg.47
Glycogen_metabolism	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229899.peg.48
Glycogen_metabolism	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229899.peg.259
Glycogen_metabolism_cluster	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229899.peg.51
Glycogen_metabolism_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229899.peg.52
Glycogen_metabolism_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229899.peg.260
Glycogen_metabolism_cluster	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229899.peg.49
Glycogen_metabolism_cluster	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229899.peg.50
Glycogen_metabolism_cluster	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229899.peg.47
Glycogen_metabolism_cluster	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229899.peg.48
Glycolate,_glyoxylate_interconversions	Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD	fig|6666666.229899.peg.322
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.229899.peg.2227
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229899.peg.313
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229899.peg.1606
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229899.peg.620
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229899.peg.1074
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229899.peg.1267
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229899.peg.546
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.229899.peg.917
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229899.peg.2279
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229899.peg.1590
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229899.peg.916
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229899.peg.1015
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229899.peg.1782
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229899.peg.2365
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229899.peg.1477
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229899.peg.620
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.229899.peg.1074
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229899.peg.1267
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229899.peg.546
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229899.peg.2279
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229899.peg.916
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229899.peg.1015
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229899.peg.1782
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229899.peg.2365
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229899.peg.1477
Glycyl-tRNA_synthetase	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229899.peg.1409
Glycyl-tRNA_synthetase	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229899.peg.1403
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229899.peg.1109
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229899.peg.629
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229899.peg.1409
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229899.peg.1403
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1188
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1624
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1777
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229899.peg.1717
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229899.peg.1718
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229899.peg.191
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229899.peg.518
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229899.peg.517
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229899.peg.1315
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229899.peg.1316
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229899.peg.1647
HPr_catabolite_repression_system	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229899.peg.2210
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229899.peg.518
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229899.peg.517
Heat_shock_dnaK_gene_cluster_extended	FIG001341: Probable Fe(2+)-trafficking protein YggX	fig|6666666.229899.peg.1092
Heat_shock_dnaK_gene_cluster_extended	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229899.peg.2339
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229899.peg.1647
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229899.peg.735
Heat_shock_dnaK_gene_cluster_extended	RNA polymerase sigma factor RpoH	fig|6666666.229899.peg.1346
Heat_shock_dnaK_gene_cluster_extended	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229899.peg.733
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.229899.peg.1102
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229899.peg.1071
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.229899.peg.1493
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229899.peg.852
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229899.peg.626
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229899.peg.375
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229899.peg.1944
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229899.peg.1945
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229899.peg.1189
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229899.peg.1191
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229899.peg.140
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229899.peg.987
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229899.peg.1645
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229899.peg.1646
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229899.peg.1960
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Paraquat-inducible protein A	fig|6666666.229899.peg.2064
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Paraquat-inducible protein B	fig|6666666.229899.peg.2063
Heme_and_Siroheme_Biosynthesis	Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	fig|6666666.229899.peg.1475
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.229899.peg.324
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.229899.peg.299
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.229899.peg.348
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229899.peg.1821
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.229899.peg.1026
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.229899.peg.841
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)	fig|6666666.229899.peg.812
Heme_and_Siroheme_Biosynthesis	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229899.peg.733
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.229899.peg.1036
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229899.peg.1024
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.229899.peg.1025
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229899.peg.1191
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229899.peg.140
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229899.peg.987
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229899.peg.1645
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229899.peg.1646
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229899.peg.1960
Hexose_Phosphate_Uptake_System	Hexose phosphate uptake regulatory protein UhpC	fig|6666666.229899.peg.1582
Hfl_operon	GTP-binding protein HflX	fig|6666666.229899.peg.2177
Hfl_operon	HflC protein	fig|6666666.229899.peg.594
Hfl_operon	HflK protein	fig|6666666.229899.peg.593
Hfl_operon	RNA-binding protein Hfq	fig|6666666.229899.peg.2178
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.229899.peg.1612
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Cof protein, HD superfamily hydrolase	fig|6666666.229899.peg.921
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229899.peg.1133
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229899.peg.735
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleotidase YfbR, HD superfamily	fig|6666666.229899.peg.199
Hydrogenases	Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.229899.peg.2081
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229899.peg.813
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229899.peg.807
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229899.peg.2077
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229899.peg.2079
Inositol_catabolism	5-deoxy-glucuronate isomerase (EC 5.3.1.-)	fig|6666666.229899.peg.231
Inositol_catabolism	5-keto-2-deoxygluconokinase (EC 2.7.1.92)	fig|6666666.229899.peg.2007
Inositol_catabolism	Epi-inositol hydrolase (EC 3.7.1.-)	fig|6666666.229899.peg.2006
Inositol_catabolism	Inositol transport system ATP-binding protein	fig|6666666.229899.peg.452
Inositol_catabolism	Inositol transport system permease protein	fig|6666666.229899.peg.451
Inositol_catabolism	Inositol transport system sugar-binding protein	fig|6666666.229899.peg.453
Inositol_catabolism	Inositol transport system sugar-binding protein	fig|6666666.229899.peg.454
Inositol_catabolism	Inosose dehydratase (EC 4.2.1.44)	fig|6666666.229899.peg.2005
Inositol_catabolism	Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)	fig|6666666.229899.peg.456
Inositol_catabolism	Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)	fig|6666666.229899.peg.2004
Inositol_catabolism	Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18)	fig|6666666.229899.peg.455
Inositol_catabolism	Predicted transcriptional regulator of the myo-inositol catabolic operon	fig|6666666.229899.peg.2008
Inositol_catabolism	uncharacterized domain	fig|6666666.229899.peg.2007
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229899.peg.1813
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229899.peg.11
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229899.peg.1040
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229899.peg.1718
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229899.peg.1808
Inteins	Translation initiation factor 2	fig|6666666.229899.peg.293
Intracellular_septation_in_Enterobacteria	Acyl-CoA thioesterase YciA, involved in membrane biogenesis	fig|6666666.229899.peg.1655
Intracellular_septation_in_Enterobacteria	Intracellular septation protein IspA	fig|6666666.229899.peg.1654
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, ATP-binding protein	fig|6666666.229899.peg.105
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, ATP-binding protein	fig|6666666.229899.peg.1098
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229899.peg.537
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229899.peg.538
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229899.peg.1096
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229899.peg.2296
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229899.peg.104
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229899.peg.539
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229899.peg.1097
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229899.peg.2297
Iron_transport_system_including_ABC_transporter	Cytochrome C553 (soluble cytochrome f)	fig|6666666.229899.peg.312
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, ATP-binding subunit	fig|6666666.229899.peg.310
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, permease protein 2	fig|6666666.229899.peg.309
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, substrate binding protein	fig|6666666.229899.peg.307
Iron_transport_system_including_ABC_transporter	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229899.peg.305
Iron_transport_system_including_ABC_transporter	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229899.peg.306
Iron_transport_system_including_ABC_transporter	Possible periplasmic thiredoxin	fig|6666666.229899.peg.311
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229899.peg.193
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229899.peg.2245
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229899.peg.979
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229899.peg.2244
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229899.peg.707
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229899.peg.1610
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229899.peg.1609
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229899.peg.413
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229899.peg.738
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229899.peg.786
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229899.peg.2245
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229899.peg.978
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229899.peg.2245
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229899.peg.2245
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229899.peg.2245
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229899.peg.2245
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229899.peg.1951
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229899.peg.2245
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229899.peg.978
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.229899.peg.2152
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.229899.peg.2387
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.229899.peg.908
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.229899.peg.274
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.229899.peg.971
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.229899.peg.2388
KDO2-Lipid_A_biosynthesis	DNA internalization-related competence protein ComEC/Rec2	fig|6666666.229899.peg.270
KDO2-Lipid_A_biosynthesis	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229899.peg.1166
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-)	fig|6666666.229899.peg.120
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	fig|6666666.229899.peg.2323
KDO2-Lipid_A_biosynthesis	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25)	fig|6666666.229899.peg.271
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.229899.peg.970
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.229899.peg.560
KDO2-Lipid_A_biosynthesis	LptA, protein essential for LPS transport across the periplasm	fig|6666666.229899.peg.561
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.229899.peg.272
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.229899.peg.608
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108)	fig|6666666.229899.peg.1690
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.229899.peg.973
KDO2-Lipid_A_biosynthesis_cluster_2	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.229899.peg.274
KDO2-Lipid_A_biosynthesis_cluster_2	DNA internalization-related competence protein ComEC/Rec2	fig|6666666.229899.peg.270
KDO2-Lipid_A_biosynthesis_cluster_2	FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster	fig|6666666.229899.peg.273
KDO2-Lipid_A_biosynthesis_cluster_2	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25)	fig|6666666.229899.peg.271
KDO2-Lipid_A_biosynthesis_cluster_2	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.229899.peg.272
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229899.peg.883
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229899.peg.882
L-Arabinose_utilization	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)	fig|6666666.229899.peg.494
L-ascorbate_utilization_(and_related_gene_clusters)	3-keto-L-gulonate 6-phosphate decarboxylase	fig|6666666.229899.peg.500
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate utilization transcriptional regulator UlaR, HTH-type	fig|6666666.229899.peg.496
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	fig|6666666.229899.peg.499
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate-specific PTS system, EIIC component	fig|6666666.229899.peg.498
L-ascorbate_utilization_(and_related_gene_clusters)	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)	fig|6666666.229899.peg.494
L-ascorbate_utilization_(and_related_gene_clusters)	L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-)	fig|6666666.229899.peg.495
L-ascorbate_utilization_(and_related_gene_clusters)	L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-)	fig|6666666.229899.peg.1008
L-ascorbate_utilization_(and_related_gene_clusters)	Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G)	fig|6666666.229899.peg.497
L-rhamnose_utilization	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229899.peg.416
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.229899.peg.802
LOS_core_oligosaccharide_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.229899.peg.908
LOS_core_oligosaccharide_biosynthesis	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)	fig|6666666.229899.peg.1361
LOS_core_oligosaccharide_biosynthesis	ADP-heptose synthase (EC 2.7.-.-)	fig|6666666.229899.peg.2324
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229899.peg.905
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229899.peg.1319
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229899.peg.1359
LOS_core_oligosaccharide_biosynthesis	Beta-1,4-galactosyltransferase	fig|6666666.229899.peg.1124
LOS_core_oligosaccharide_biosynthesis	D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-)	fig|6666666.229899.peg.1795
LOS_core_oligosaccharide_biosynthesis	D-glycero-beta-D-manno-heptose 7-phosphate kinase	fig|6666666.229899.peg.2324
LOS_core_oligosaccharide_biosynthesis	O-antigen ligase	fig|6666666.229899.peg.919
LOS_core_oligosaccharide_biosynthesis	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229899.peg.378
LOS_core_oligosaccharide_biosynthesis	Phosphoheptose isomerase 1 (EC 5.3.1.-)	fig|6666666.229899.peg.1711
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229899.peg.1526
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229899.peg.1529
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229899.peg.1528
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229899.peg.1525
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229899.peg.1531
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229899.peg.1530
Lactate_utilization	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229899.peg.416
Lactate_utilization	L-lactate permease	fig|6666666.229899.peg.417
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229899.peg.401
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229899.peg.1328
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229899.peg.1633
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229899.peg.487
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229899.peg.1634
Lactose_and_Galactose_Uptake_and_Utilization	Galactose operon repressor, GalR-LacI family of transcriptional regulators	fig|6666666.229899.peg.1636
Lactose_and_Galactose_Uptake_and_Utilization	Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	fig|6666666.229899.peg.1635
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229899.peg.1638
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229899.peg.1639
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)	fig|6666666.229899.peg.1637
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	fig|6666666.229899.peg.1640
Lactose_and_Galactose_Uptake_and_Utilization	Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)	fig|6666666.229899.peg.2240
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229899.peg.401
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229899.peg.1328
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229899.peg.487
Lactose_utilization	Galactoside O-acetyltransferase (EC 2.3.1.18)	fig|6666666.229899.peg.1421
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229899.peg.193
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229899.peg.193
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229899.peg.254
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229899.peg.1241
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229899.peg.746
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.229899.peg.1240
Lipoic_acid_metabolism	Proposed lipoate regulatory protein YbeD	fig|6666666.229899.peg.1239
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.229899.peg.1241
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.229899.peg.1240
Lipoic_acid_synthesis_cluster	Proposed lipoate regulatory protein YbeD	fig|6666666.229899.peg.1239
Lipoic_acid_synthesis_cluster	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229899.peg.2028
Lipopolysaccharide_assembly	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229899.peg.1166
Lipopolysaccharide_assembly	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.229899.peg.560
Lipopolysaccharide_assembly	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229899.peg.2273
Lipopolysaccharide_assembly	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229899.peg.2272
Lipopolysaccharide_assembly	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229899.peg.2274
Lipopolysaccharide_assembly	LptA, protein essential for LPS transport across the periplasm	fig|6666666.229899.peg.561
Lipopolysaccharide_assembly	Outer membrane lipoprotein LolB	fig|6666666.229899.peg.412
Lipopolysaccharide_assembly	Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex	fig|6666666.229899.peg.1057
Lipopolysaccharide_assembly	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229899.peg.2053
Lipopolysaccharide_assembly	Outer membrane protein H precursor	fig|6666666.229899.peg.974
Lipopolysaccharide_assembly	Outer membrane protein Imp, required for envelope biogenesis	fig|6666666.229899.peg.934
Lipopolysaccharide_assembly	Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL)	fig|6666666.229899.peg.582
Lipopolysaccharide_assembly	Outer membrane protein assembly factor YaeT precursor	fig|6666666.229899.peg.975
Lipopolysaccharide_assembly	Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB)	fig|6666666.229899.peg.876
Lipopolysaccharide_assembly	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229899.peg.1176
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, ATP-binding protein YrbF	fig|6666666.229899.peg.564
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, auxiliary component YrbC	fig|6666666.229899.peg.567
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, periplasmic component YrbD	fig|6666666.229899.peg.566
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, permease component YrbE	fig|6666666.229899.peg.565
Lipopolysaccharide_assembly	Uncharacterized protein YrbK clustered with lipopolysaccharide transporters	fig|6666666.229899.peg.562
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229899.peg.1623
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229899.peg.739
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229899.peg.1889
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229899.peg.2273
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229899.peg.2272
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229899.peg.2274
Lipoprotein_sorting_system	Outer membrane lipoprotein LolB	fig|6666666.229899.peg.412
Lipoprotein_sorting_system	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229899.peg.2053
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229899.peg.972
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.229899.peg.971
Llipid_A_biosynthesis_cluster	FIG053235: Diacylglucosamine hydrolase like	fig|6666666.229899.peg.1952
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.229899.peg.970
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.229899.peg.974
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.229899.peg.975
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.229899.peg.608
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.229899.peg.973
LysR-family_proteins_in_Escherichia_coli	Cys regulon transcriptional activator CysB	fig|6666666.229899.peg.247
LysR-family_proteins_in_Escherichia_coli	Glycine cleavage system transcriptional activator GcvA	fig|6666666.229899.peg.194
LysR-family_proteins_in_Escherichia_coli	HTH-type transcriptional regulator IlvY	fig|6666666.229899.peg.998
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.229899.peg.1256
LysR-family_proteins_in_Escherichia_coli	Transcriptional activator MetR	fig|6666666.229899.peg.144
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	HTH-type transcriptional regulator IlvY	fig|6666666.229899.peg.998
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.229899.peg.1256
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Transcriptional activator MetR	fig|6666666.229899.peg.144
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.229899.peg.246
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.229899.peg.2286
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.229899.peg.581
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229899.peg.1396
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229899.peg.2146
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.229899.peg.588
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229899.peg.931
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229899.peg.1389
Lysine_Biosynthesis_DAP_Pathway	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229899.peg.1686
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.229899.peg.246
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.229899.peg.2286
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.229899.peg.581
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229899.peg.1396
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229899.peg.2146
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.229899.peg.588
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229899.peg.931
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229899.peg.1389
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229899.peg.1686
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229899.peg.786
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229899.peg.764
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229899.peg.765
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229899.peg.763
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229899.peg.761
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1188
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1624
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1777
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229899.peg.866
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229899.peg.1601
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229899.peg.52
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229899.peg.260
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229899.peg.1633
Maltose_and_Maltodextrin_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.229899.peg.722
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229899.peg.47
Maltose_and_Maltodextrin_Utilization	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229899.peg.259
Maltose_and_Maltodextrin_Utilization	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)	fig|6666666.229899.peg.2305
Maltose_and_Maltodextrin_Utilization	Maltose operon periplasmic protein MalM	fig|6666666.229899.peg.2306
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.229899.peg.2301
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.229899.peg.2300
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229899.peg.2303
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)	fig|6666666.229899.peg.2304
Maltose_and_Maltodextrin_Utilization	Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon	fig|6666666.229899.peg.2355
Maltose_and_Maltodextrin_Utilization	Periplasmic alpha-amylase (EC 3.2.1.1)	fig|6666666.229899.peg.2299
Maltose_and_Maltodextrin_Utilization	Transcriptional activator of maltose regulon, MalT	fig|6666666.229899.peg.258
Maltose_utilization_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229899.peg.52
Maltose_utilization_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229899.peg.260
Maltose_utilization_cluster	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229899.peg.259
Maltose_utilization_cluster	Transcriptional activator of maltose regulon, MalT	fig|6666666.229899.peg.258
Mannitol_Utilization	Mannitol operon repressor	fig|6666666.229899.peg.2003
Mannitol_Utilization	Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)	fig|6666666.229899.peg.2002
Mannitol_Utilization	PTS system, mannitol-specific IIA component (EC 2.7.1.69)	fig|6666666.229899.peg.2001
Mannitol_Utilization	PTS system, mannitol-specific IIB component (EC 2.7.1.69)	fig|6666666.229899.peg.2001
Mannitol_Utilization	PTS system, mannitol-specific IIC component (EC 2.7.1.69)	fig|6666666.229899.peg.2001
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229899.peg.2211
Mannitol_Utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229899.peg.2210
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)	fig|6666666.229899.peg.1324
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.229899.peg.354
Mannose_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.229899.peg.1322
Mannose_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.229899.peg.1570
Mannose_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229899.peg.1322
Mannose_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229899.peg.1570
Mannose_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229899.peg.1321
Mannose_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229899.peg.1571
Mannose_Metabolism	PTS system, mannose-specific IID component (EC 2.7.1.69)	fig|6666666.229899.peg.1320
Mannose_Metabolism	PTS system, mannose-specific IID component (EC 2.7.1.69)	fig|6666666.229899.peg.1572
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.229899.peg.1067
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229899.peg.639
Menaquinone_and_Phylloquinone_Biosynthesis	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.229899.peg.1559
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.229899.peg.673
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	fig|6666666.229899.peg.672
Menaquinone_and_Phylloquinone_Biosynthesis	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.229899.peg.674
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.229899.peg.1478
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229899.peg.1482
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.229899.peg.125
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229899.peg.639
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.229899.peg.1559
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.229899.peg.673
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	fig|6666666.229899.peg.672
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.229899.peg.674
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.229899.peg.1478
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229899.peg.1482
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.229899.peg.125
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229899.peg.1238
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229899.peg.2136
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229899.peg.1701
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229899.peg.1700
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229899.peg.298
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229899.peg.208
Methionine_Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.229899.peg.145
Methionine_Biosynthesis	Cystathionine beta-lyase (EC 4.4.1.8)	fig|6666666.229899.peg.522
Methionine_Biosynthesis	Cystathionine gamma-synthase (EC 2.5.1.48)	fig|6666666.229899.peg.1922
Methionine_Biosynthesis	Cystathionine gamma-synthase (EC 2.5.1.48)	fig|6666666.229899.peg.1923
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.229899.peg.754
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.229899.peg.242
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.229899.peg.588
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229899.peg.589
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.229899.peg.1794
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.229899.peg.1999
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.229899.peg.1793
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.229899.peg.1792
Methionine_Biosynthesis	Methionine repressor MetJ	fig|6666666.229899.peg.1069
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229899.peg.219
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229899.peg.670
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229899.peg.1423
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229899.peg.1264
Methionine_Biosynthesis	Transcriptional activator MetR	fig|6666666.229899.peg.144
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229899.peg.1794
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229899.peg.1999
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.229899.peg.1793
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.229899.peg.1792
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229899.peg.256
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229899.peg.219
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229899.peg.670
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229899.peg.1423
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229899.peg.219
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229899.peg.349
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229899.peg.1959
Methylglyoxal_Metabolism	Methylglyoxal synthase (EC 4.2.3.3)	fig|6666666.229899.peg.2021
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229899.peg.801
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229899.peg.1955
Molybdenum_cofactor_biosynthesis	DNA-binding domain of ModE	fig|6666666.229899.peg.201
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229899.peg.2135
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229899.peg.2120
Molybdenum_cofactor_biosynthesis	Molybdate-binding domain of ModE	fig|6666666.229899.peg.201
Molybdenum_cofactor_biosynthesis	Molybdate-binding domain of ModE	fig|6666666.229899.peg.2337
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.229899.peg.202
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.229899.peg.513
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.229899.peg.2348
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.229899.peg.2349
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.229899.peg.2350
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.229899.peg.2351
Molybdenum_cofactor_biosynthesis	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	fig|6666666.229899.peg.204
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.229899.peg.203
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.229899.peg.512
Molybdenum_cofactor_biosynthesis	Molybdenum transport system protein ModD	fig|6666666.229899.peg.510
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis molybdochelatase MogA	fig|6666666.229899.peg.964
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.229899.peg.2134
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeB	fig|6666666.229899.peg.2133
Molybdenum_cofactor_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.229899.peg.1748
Molybdenum_cofactor_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobB	fig|6666666.229899.peg.938
Muconate_lactonizing_enzyme_family	L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase	fig|6666666.229899.peg.297
Muconate_lactonizing_enzyme_family	L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase	fig|6666666.229899.peg.811
Muconate_lactonizing_enzyme_family	L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase	fig|6666666.229899.peg.1460
Muconate_lactonizing_enzyme_family	L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase	fig|6666666.229899.peg.1597
Muconate_lactonizing_enzyme_family	L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase	fig|6666666.229899.peg.1796
Muconate_lactonizing_enzyme_family	L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase	fig|6666666.229899.peg.2168
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229899.peg.1482
MukBEF_Chromosome_Condensation	Chromosome partition protein MukB	fig|6666666.229899.peg.38
MukBEF_Chromosome_Condensation	Chromosome partition protein MukE	fig|6666666.229899.peg.39
MukBEF_Chromosome_Condensation	Chromosome partition protein MukF	fig|6666666.229899.peg.42
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Inner membrane component of tripartite multidrug resistance system	fig|6666666.229899.peg.473
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Membrane fusion component of tripartite multidrug resistance system	fig|6666666.229899.peg.470
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Membrane fusion component of tripartite multidrug resistance system	fig|6666666.229899.peg.471
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Membrane fusion component of tripartite multidrug resistance system	fig|6666666.229899.peg.472
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Outer membrane component of tripartite multidrug resistance system	fig|6666666.229899.peg.2397
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.229899.peg.1115
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.229899.peg.1154
Multidrug_Resistance_Efflux_Pumps	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)	fig|6666666.229899.peg.2259
Multidrug_Resistance_Efflux_Pumps	Macrolide-specific efflux protein MacA	fig|6666666.229899.peg.2260
Multidrug_Resistance_Efflux_Pumps	Membrane fusion protein of RND family multidrug efflux pump	fig|6666666.229899.peg.1151
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229899.peg.2142
Multidrug_Resistance_Efflux_Pumps	RND efflux system, outer membrane lipoprotein CmeC	fig|6666666.229899.peg.2258
Multidrug_efflux_pump_in_Campylobacter_jejuni_(CmeABC_operon)	RND efflux system, outer membrane lipoprotein CmeC	fig|6666666.229899.peg.2258
Murein_Hydrolases	Beta N-acetyl-glucosaminidase (EC 3.2.1.52)	fig|6666666.229899.peg.617
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229899.peg.1238
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229899.peg.2136
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-)	fig|6666666.229899.peg.549
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)	fig|6666666.229899.peg.2115
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-)	fig|6666666.229899.peg.1091
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229899.peg.2181
Murein_Hydrolases	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	fig|6666666.229899.peg.1657
Murein_hydrolase_regulation_and_cell_death	Antiholin-like protein LrgA	fig|6666666.229899.peg.62
Murein_hydrolase_regulation_and_cell_death	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229899.peg.2057
Murein_hydrolase_regulation_and_cell_death	LrgA-associated membrane protein LrgB	fig|6666666.229899.peg.61
Murein_hydrolase_regulation_and_cell_death	LysR family regulatory protein CidR	fig|6666666.229899.peg.1741
Murein_hydrolase_regulation_and_cell_death	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229899.peg.1662
Murein_hydrolase_regulation_and_cell_death	tRNA-dihydrouridine synthase C (EC 1.-.-.-)	fig|6666666.229899.peg.1099
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229899.peg.1524
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229899.peg.1523
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229899.peg.1000
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229899.peg.1001
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229899.peg.1002
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229899.peg.1003
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229899.peg.925
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229899.peg.1004
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229899.peg.620
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229899.peg.1618
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229899.peg.401
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229899.peg.1328
NADPH:quinone_oxidoreductase_2	NADPH:quinone oxidoreductase 2	fig|6666666.229899.peg.1272
NADPH:quinone_oxidoreductase_2	NADPH:quinone oxidoreductase 2	fig|6666666.229899.peg.1273
NADPH:quinone_oxidoreductase_2	Redox-sensing transcriptional regulator QorR	fig|6666666.229899.peg.1274
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229899.peg.1684
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229899.peg.1649
NAD_and_NADP_cofactor_biosynthesis_global	NMN 5'-nucleotidase, extracellular (EC 3.1.3.5)	fig|6666666.229899.peg.552
NAD_and_NADP_cofactor_biosynthesis_global	NMN phosphatase (EC 3.1.3.5)	fig|6666666.229899.peg.1197
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamide phosphoribosyltransferase (EC 2.4.2.12)	fig|6666666.229899.peg.586
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1)	fig|6666666.229899.peg.820
NAD_and_NADP_cofactor_biosynthesis_global	Ribosyl nicotinamide transporter, PnuC-like	fig|6666666.229899.peg.1469
NAD_and_NADP_cofactor_biosynthesis_global	Ribosylnicotinamide kinase (EC 2.7.1.22)	fig|6666666.229899.peg.820
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.229899.peg.187
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229899.peg.186
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.229899.peg.185
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229899.peg.184
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.229899.peg.182
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.229899.peg.183
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229899.peg.1085
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229899.peg.1084
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229899.peg.1083
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229899.peg.1082
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229899.peg.1081
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.229899.peg.1080
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Probable exported or periplasmic protein in ApbE locus	fig|6666666.229899.peg.1077
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	fig|6666666.229899.peg.2375
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.229899.peg.2374
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)	fig|6666666.229899.peg.2376
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HybG	fig|6666666.229899.peg.2378
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.229899.peg.212
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.229899.peg.211
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.229899.peg.2092
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HybF	fig|6666666.229899.peg.402
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229899.peg.213
Nitrate_and_nitrite_ammonification	Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly	fig|6666666.229899.peg.644
Nitrate_and_nitrite_ammonification	Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly	fig|6666666.229899.peg.642
Nitrate_and_nitrite_ammonification	Cytochrome c-type protein NapC	fig|6666666.229899.peg.1357
Nitrate_and_nitrite_ammonification	Cytochrome c-type protein NrfB precursor	fig|6666666.229899.peg.648
Nitrate_and_nitrite_ammonification	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.229899.peg.649
Nitrate_and_nitrite_ammonification	Ferredoxin-type protein NapF (periplasmic nitrate reductase)	fig|6666666.229899.peg.1410
Nitrate_and_nitrite_ammonification	Ferredoxin-type protein NapG (periplasmic nitrate reductase)	fig|6666666.229899.peg.1354
Nitrate_and_nitrite_ammonification	Nitrate reductase cytochrome c550-type subunit	fig|6666666.229899.peg.1356
Nitrate_and_nitrite_ammonification	Nitrate/nitrite response regulator protein	fig|6666666.229899.peg.1028
Nitrate_and_nitrite_ammonification	Nitrate/nitrite sensor protein (EC 2.7.3.-)	fig|6666666.229899.peg.1350
Nitrate_and_nitrite_ammonification	NrfC protein	fig|6666666.229899.peg.647
Nitrate_and_nitrite_ammonification	NrfD protein	fig|6666666.229899.peg.646
Nitrate_and_nitrite_ammonification	Periplasmic nitrate reductase precursor (EC 1.7.99.4)	fig|6666666.229899.peg.1353
Nitrate_and_nitrite_ammonification	Polyferredoxin NapH (periplasmic nitrate reductase)	fig|6666666.229899.peg.1355
Nitrate_and_nitrite_ammonification	Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly	fig|6666666.229899.peg.643
Nitrate_and_nitrite_ammonification	periplasmic diheme c-type cytochrome, NapB	fig|6666666.229899.peg.1352
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229899.peg.686
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229899.peg.979
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229899.peg.2244
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229899.peg.707
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229899.peg.1610
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229899.peg.1609
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229899.peg.413
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229899.peg.738
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229899.peg.1063
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP compounds hydrolase NudE (EC 3.6.1.-)	fig|6666666.229899.peg.854
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229899.peg.1684
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229899.peg.1887
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229899.peg.1133
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.229899.peg.1164
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.229899.peg.1035
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229899.peg.295
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229899.peg.292
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229899.peg.294
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229899.peg.293
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229899.peg.208
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229899.peg.877
One-carbon_metabolism_by_tetrahydropterines	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.229899.peg.109
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229899.peg.1314
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229899.peg.1314
Orphan_regulatory_proteins	Copper sensory histidine kinase CpxA	fig|6666666.229899.peg.1055
Orphan_regulatory_proteins	Copper-sensing two-component system response regulator CpxR	fig|6666666.229899.peg.1056
Orphan_regulatory_proteins	DNA transformation protein TfoX	fig|6666666.229899.peg.1345
Orphan_regulatory_proteins	Glycine cleavage system transcriptional activator GcvA	fig|6666666.229899.peg.194
Orphan_regulatory_proteins	Sensory histidine kinase QseC	fig|6666666.229899.peg.164
Orphan_regulatory_proteins	Sensory histidine kinase QseC	fig|6666666.229899.peg.165
Orphan_regulatory_proteins	Two-component system response regulator QseB	fig|6666666.229899.peg.166
Orphan_regulatory_proteins	Two-component system response regulator QseB	fig|6666666.229899.peg.167
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229899.peg.321
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229899.peg.359
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229899.peg.370
Osmotic_stress_cluster	Heat shock (predicted periplasmic) protein YciM, precursor	fig|6666666.229899.peg.134
Osmotic_stress_cluster	Osmotically inducible lipoprotein B precursor	fig|6666666.229899.peg.2167
Osmotic_stress_cluster	Phosphatidylglycerophosphatase B (EC 3.1.3.27)	fig|6666666.229899.peg.2121
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.229899.peg.1817
Oxidative_stress	Ferric uptake regulation protein FUR	fig|6666666.229899.peg.129
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.229899.peg.469
Oxidative_stress	Fumarate and nitrate reduction regulatory protein	fig|6666666.229899.peg.14
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.229899.peg.1256
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.229899.peg.469
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229899.peg.686
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.229899.peg.469
Oxidative_stress	Paraquat-inducible protein A	fig|6666666.229899.peg.2064
Oxidative_stress	Paraquat-inducible protein B	fig|6666666.229899.peg.2063
Oxidative_stress	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.229899.peg.640
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.229899.peg.864
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.229899.peg.861
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.229899.peg.860
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229899.peg.732
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229899.peg.414
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229899.peg.1607
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.229899.peg.1459
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.229899.peg.1458
Pentose_phosphate_pathway	Transketolase, C-terminal section (EC 2.2.1.1)	fig|6666666.229899.peg.2016
Pentose_phosphate_pathway	Transketolase, N-terminal section (EC 2.2.1.1)	fig|6666666.229899.peg.2015
Peptide_ABC_transport_system_Sap	Peptide transport periplasmic protein SapA	fig|6666666.229899.peg.2173
Peptide_ABC_transport_system_Sap	Peptide transport system ATP-binding protein SapD	fig|6666666.229899.peg.2170
Peptide_ABC_transport_system_Sap	Peptide transport system ATP-binding protein SapF	fig|6666666.229899.peg.2169
Peptide_ABC_transport_system_Sap	Peptide transport system permease protein SapB	fig|6666666.229899.peg.2172
Peptide_ABC_transport_system_Sap	Peptide transport system permease protein SapC	fig|6666666.229899.peg.2171
Peptide_methionine_sulfoxide_reductase	Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase	fig|6666666.229899.peg.382
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229899.peg.381
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229899.peg.381
Peptide_methionine_sulfoxide_reductase	Thiol:disulfide oxidoreductase associated with MetSO reductase	fig|6666666.229899.peg.383
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229899.peg.1702
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229899.peg.1694
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229899.peg.1238
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229899.peg.2136
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229899.peg.1288
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229899.peg.1596
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229899.peg.576
Peptidoglycan_Biosynthesis	Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)	fig|6666666.229899.peg.2115
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.229899.peg.1659
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229899.peg.304
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229899.peg.506
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229899.peg.1139
Peptidoglycan_Biosynthesis	Murein-DD-endopeptidase (EC 3.4.99.-)	fig|6666666.229899.peg.43
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229899.peg.1288
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229899.peg.1235
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.229899.peg.1699
Peptidoglycan_Biosynthesis	Rare lipoprotein A precursor	fig|6666666.229899.peg.1237
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.229899.peg.1236
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229899.peg.1349
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229899.peg.570
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229899.peg.1696
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229899.peg.1695
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229899.peg.1698
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229899.peg.1701
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229899.peg.1700
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229899.peg.1694
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229899.peg.1695
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)	fig|6666666.229899.peg.547
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229899.peg.1698
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229899.peg.1701
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229899.peg.1700
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.229899.peg.744
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.229899.peg.1215
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229899.peg.1253
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229899.peg.803
Peptidyl-prolyl_cis-trans_isomerase	Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8)	fig|6666666.229899.peg.1802
Peptidyl-prolyl_cis-trans_isomerase	Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)	fig|6666666.229899.peg.715
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229899.peg.1176
Periplasmic_Stress_Response	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229899.peg.976
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229899.peg.974
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegQ, serine protease	fig|6666666.229899.peg.358
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegS	fig|6666666.229899.peg.198
Periplasmic_Stress_Response	Sigma factor RpoE negative regulatory protein RseA	fig|6666666.229899.peg.941
Periplasmic_Stress_Response	Sigma factor RpoE negative regulatory protein RseB precursor	fig|6666666.229899.peg.940
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229899.peg.1176
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase	fig|6666666.229899.peg.654
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.229899.peg.1931
Periplasmic_disulfide_interchange	Periplasmic thiol:disulfide interchange protein DsbA	fig|6666666.229899.peg.1750
Periplasmic_disulfide_interchange	Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation	fig|6666666.229899.peg.678
Periplasmic_disulfide_interchange	Thiol:disulfide interchange protein DsbC	fig|6666666.229899.peg.222
Persister_Cells	Cell division inhibitor	fig|6666666.229899.peg.188
Persister_Cells	HipA protein	fig|6666666.229899.peg.476
Persister_Cells	HipB protein	fig|6666666.229899.peg.474
Phage_DNA_synthesis	DNA adenine methyltransferase, phage-associated	fig|6666666.229899.peg.1844
Phage_baseplate_proteins	Phage baseplate (uncharacterized for now)	fig|6666666.229899.peg.1874
Phage_packaging_machinery	Phage terminase, large subunit	fig|6666666.229899.peg.1857
Phage_packaging_machinery	Phage terminase, small subunit	fig|6666666.229899.peg.1856
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229899.peg.1851
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229899.peg.1878
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229899.peg.1879
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229899.peg.1880
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229899.peg.2342
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229899.peg.2343
Phage_tail_proteins	Phage tape measure protein	fig|6666666.229899.peg.1870
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.229899.peg.421
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.229899.peg.424
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229899.peg.250
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229899.peg.1689
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229899.peg.250
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57)	fig|6666666.229899.peg.442
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.229899.peg.1689
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Transcriptional repressor protein TyrR	fig|6666666.229899.peg.2176
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229899.peg.1031
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229899.peg.1612
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.229899.peg.1193
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229899.peg.286
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.229899.peg.285
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229899.peg.1718
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229899.peg.1718
Phosphate_metabolism	Phosphate transport regulator (distant homolog of PhoU)	fig|6666666.229899.peg.408
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.229899.peg.409
Phosphoglycerate_mutase_protein_family	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229899.peg.1887
Phosphoglycerate_mutase_protein_family	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229899.peg.1784
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229899.peg.1015
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229899.peg.1782
Phosphoglycerate_mutase_protein_family	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229899.peg.1785
Phosphoglycerate_transport_system	Phosphoglycerate transport regulatory protein PgtC	fig|6666666.229899.peg.98
Phosphoglycerate_transport_system	Phosphoglycerate transport regulatory protein PgtC	fig|6666666.229899.peg.101
Phosphoglycerate_transport_system	Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-)	fig|6666666.229899.peg.96
Phosphoglycerate_transport_system	Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-)	fig|6666666.229899.peg.97
Phosphoglycerate_transport_system	Phosphoglycerate transport system transcriptional regulatory protein PgtA	fig|6666666.229899.peg.95
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60)	fig|6666666.229899.peg.1371
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] reductase (EC 1.1.1.100)	fig|6666666.229899.peg.1370
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] synthase	fig|6666666.229899.peg.1385
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like	fig|6666666.229899.peg.1372
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Acyl carrier protein (ACP1)	fig|6666666.229899.peg.1383
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Acyl carrier protein (ACP2)	fig|6666666.229899.peg.1382
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein	fig|6666666.229899.peg.1376
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG017861: hypothetical protein	fig|6666666.229899.peg.1380
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase	fig|6666666.229899.peg.1384
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG021862: membrane protein, exporter	fig|6666666.229899.peg.1374
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG027190: Putative transmembrane protein	fig|6666666.229899.peg.1375
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG085779: Lipoprotein	fig|6666666.229899.peg.1373
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41)	fig|6666666.229899.peg.1369
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG143263: Glycosyl transferase	fig|6666666.229899.peg.1378
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase	fig|6666666.229899.peg.1379
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase	fig|6666666.229899.peg.1381
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Lysophospholipid acyltransferase	fig|6666666.229899.peg.1377
Poly-gamma-glutamate_biosynthesis	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229899.peg.163
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229899.peg.1596
Polyadenylation_bacterial	Poly(A) polymerase (EC 2.7.7.19)	fig|6666666.229899.peg.268
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229899.peg.1546
Polyadenylation_bacterial	RNA-binding protein Hfq	fig|6666666.229899.peg.2178
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229899.peg.411
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229899.peg.219
Polyamine_Metabolism	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	fig|6666666.229899.peg.1285
Polyamine_Metabolism	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	fig|6666666.229899.peg.2058
Polyamine_Metabolism	Arginine/ornithine antiporter ArcD	fig|6666666.229899.peg.788
Polyamine_Metabolism	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229899.peg.789
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229899.peg.2061
Polyamine_Metabolism	Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)	fig|6666666.229899.peg.2060
Polyamine_Metabolism	Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)	fig|6666666.229899.peg.2059
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229899.peg.786
Polyhydroxybutyrate_metabolism	D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)	fig|6666666.229899.peg.1769
Polyhydroxybutyrate_metabolism	Short chain fatty acids transporter	fig|6666666.229899.peg.785
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229899.peg.1031
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229899.peg.1612
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229899.peg.2245
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229899.peg.2245
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229899.peg.1951
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229899.peg.2245
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229899.peg.978
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229899.peg.1253
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229899.peg.803
Potassium_homeostasis	Glutathione-regulated potassium-efflux system ATP-binding protein	fig|6666666.229899.peg.1454
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.229899.peg.806
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229899.peg.124
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229899.peg.813
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229899.peg.813
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229899.peg.807
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229899.peg.807
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	LSU ribosomal protein L9p	fig|6666666.229899.peg.896
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	Primosomal replication protein N	fig|6666666.229899.peg.898
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	SSU ribosomal protein S18p	fig|6666666.229899.peg.897
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	SSU ribosomal protein S6p	fig|6666666.229899.peg.899
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229899.peg.224
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229899.peg.224
Proline,_4-hydroxyproline_uptake_and_utilization	ProQ: influences osmotic activation of compatible solute ProP	fig|6666666.229899.peg.2065
Proline,_4-hydroxyproline_uptake_and_utilization	Proline/sodium symporter PutP (TC 2.A.21.2.1)	fig|6666666.229899.peg.527
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.229899.peg.542
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.229899.peg.1213
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.229899.peg.1214
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229899.peg.1818
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229899.peg.598
Proline_Synthesis	RNA-binding C-terminal domain PUA	fig|6666666.229899.peg.1213
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229899.peg.265
Proteasome_bacterial	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229899.peg.1513
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229899.peg.1512
Proteasome_bacterial	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229899.peg.1199
Proteasome_bacterial	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229899.peg.1198
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229899.peg.716
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229899.peg.87
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.229899.peg.1817
Protection_from_Reactive_Oxygen_Species	Cytochrome c551 peroxidase (EC 1.11.1.5)	fig|6666666.229899.peg.2315
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229899.peg.686
Protection_from_Reactive_Oxygen_Species	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.229899.peg.640
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229899.peg.518
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229899.peg.517
Protein_chaperones	Chaperone protein HscA	fig|6666666.229899.peg.1903
Protein_chaperones	Chaperone protein HscB	fig|6666666.229899.peg.1904
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229899.peg.1688
Protein_chaperones	ClpB protein	fig|6666666.229899.peg.958
Protein_chaperones	ClpB protein	fig|6666666.229899.peg.959
Protein_chaperones	ClpB protein	fig|6666666.229899.peg.1394
Protein_chaperones	DnaJ-class molecular chaperone CbpA	fig|6666666.229899.peg.531
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229899.peg.1647
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.229899.peg.802
Protein_deglycation	Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation	fig|6666666.229899.peg.2229
Protein_degradation	Oligopeptidase A (EC 3.4.24.70)	fig|6666666.229899.peg.2213
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229899.peg.1513
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229899.peg.1512
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229899.peg.1199
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229899.peg.1198
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229899.peg.716
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229899.peg.87
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229899.peg.958
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229899.peg.959
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229899.peg.1394
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229899.peg.406
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229899.peg.2050
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegQ, serine protease	fig|6666666.229899.peg.358
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegS	fig|6666666.229899.peg.198
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229899.peg.1951
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229899.peg.2245
Purine_Utilization	Guanine-hypoxanthine permease	fig|6666666.229899.peg.399
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229899.peg.171
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229899.peg.1364
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229899.peg.119
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229899.peg.404
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229899.peg.1180
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.229899.peg.529
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.229899.peg.393
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.229899.peg.1591
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229899.peg.1554
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229899.peg.2165
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229899.peg.1619
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229899.peg.1575
Purine_conversions	Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR	fig|6666666.229899.peg.60
Purine_conversions	Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.229899.peg.935
Purine_nucleotide_synthesis_regulator	Purine nucleotide synthesis repressor	fig|6666666.229899.peg.243
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229899.peg.557
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229899.peg.2246
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229899.peg.2165
Putative_TldE-TldD_proteolytic_complex	FIG138315: Putative alpha helix protein	fig|6666666.229899.peg.1556
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229899.peg.509
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229899.peg.1555
Putative_sugar_ABC_transporter_(ytf_cluster)	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229899.peg.546
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229899.peg.381
Putative_sugar_ABC_transporter_(ytf_cluster)	Uncharacterized protein YtfM precursor	fig|6666666.229899.peg.1029
Putative_sugar_ABC_transporter_(ytf_cluster)	Uncharacterized protein YtfN	fig|6666666.229899.peg.1030
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229899.peg.2244
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229899.peg.731
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229899.peg.1590
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229899.peg.420
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.229899.peg.397
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.229899.peg.1583
Pyrimidine_utilization	Uracil permease	fig|6666666.229899.peg.713
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.229899.peg.2278
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229899.peg.193
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229899.peg.701
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229899.peg.701
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.229899.peg.700
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229899.peg.687
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	fig|6666666.229899.peg.2375
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.229899.peg.2374
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)	fig|6666666.229899.peg.2376
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229899.peg.1032
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229899.peg.2365
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229899.peg.450
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229899.peg.264
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.229899.peg.2023
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229899.peg.255
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	fig|6666666.229899.peg.254
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229899.peg.524
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229899.peg.265
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229899.peg.256
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229899.peg.2135
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8)	fig|6666666.229899.peg.1802
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229899.peg.611
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229899.peg.718
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229899.peg.1947
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229899.peg.1948
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229899.peg.2253
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229899.peg.2254
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229899.peg.1022
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.229899.peg.1680
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.229899.peg.465
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229899.peg.464
Queuosine-Archaeosine_Biosynthesis	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229899.peg.733
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229899.peg.441
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229899.peg.444
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229899.peg.1483
RNA_methylation	16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176)	fig|6666666.229899.peg.808
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229899.peg.1569
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.229899.peg.1110
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-)	fig|6666666.229899.peg.618
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-)	fig|6666666.229899.peg.619
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)	fig|6666666.229899.peg.1677
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229899.peg.890
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229899.peg.1234
RNA_methylation	LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM	fig|6666666.229899.peg.195
RNA_methylation	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229899.peg.108
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229899.peg.704
RNA_methylation	Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52)	fig|6666666.229899.peg.1992
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229899.peg.1071
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229899.peg.1175
RNA_methylation	hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]	fig|6666666.229899.peg.913
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229899.peg.1275
RNA_methylation	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229899.peg.1644
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229899.peg.884
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.229899.peg.1468
RNA_methylation	tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)	fig|6666666.229899.peg.1790
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229899.peg.1094
RNA_methylation	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229899.peg.1752
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229899.peg.1076
RNA_methylation	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229899.peg.1909
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229899.peg.630
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229899.peg.1275
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229899.peg.1270
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229899.peg.630
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229899.peg.631
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229899.peg.634
RNA_modification_cluster	Protein YidD	fig|6666666.229899.peg.632
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229899.peg.633
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229899.peg.825
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229899.peg.1524
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229899.peg.1523
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.229899.peg.1592
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.229899.peg.889
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.229899.peg.2208
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229899.peg.526
RNA_processing_and_degradation,_bacterial	Exoribonuclease II (EC 3.1.13.1)	fig|6666666.229899.peg.468
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.229899.peg.1929
RNA_processing_and_degradation,_bacterial	Ribonuclease E inhibitor RraA	fig|6666666.229899.peg.1558
RNA_processing_and_degradation,_bacterial	Ribonuclease E inhibitor RraB	fig|6666666.229899.peg.805
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229899.peg.628
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.1470
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.2252
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229899.peg.248
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229899.peg.1926
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229899.peg.875
RNA_pseudouridine_syntheses	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.662
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.79
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.1602
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229899.peg.291
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229899.peg.91
Rcs_phosphorelay_signal_transduction_pathway	DnaJ-like protein DjlA	fig|6666666.229899.peg.1100
RecA_and_RecX	RecA protein	fig|6666666.229899.peg.1455
RecA_and_RecX	Regulatory protein RecX	fig|6666666.229899.peg.1456
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229899.peg.936
Recycling_of_Peptidoglycan_Amino_Acids	AmpG permease	fig|6666666.229899.peg.403
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229899.peg.2181
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD	fig|6666666.229899.peg.1544
Recycling_of_Peptidoglycan_Amino_Acids	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)	fig|6666666.229899.peg.547
Recycling_of_Peptidoglycan_Amino_Sugars	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-)	fig|6666666.229899.peg.1287
Recycling_of_Peptidoglycan_Amino_Sugars	Beta N-acetyl-glucosaminidase (EC 3.2.1.52)	fig|6666666.229899.peg.617
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229899.peg.130
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229899.peg.927
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229899.peg.368
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229899.peg.365
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229899.peg.374
Respiratory_dehydrogenases_1	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229899.peg.416
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229899.peg.373
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229899.peg.69
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229899.peg.2036
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229899.peg.2293
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229899.peg.2294
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229899.peg.2034
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229899.peg.1604
Riboflavin,_FMN_and_FAD_metabolism	5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase	fig|6666666.229899.peg.1387
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229899.peg.197
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229899.peg.2281
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229899.peg.197
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229899.peg.743
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229899.peg.2120
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229899.peg.743
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229899.peg.2141
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229899.peg.1604
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase	fig|6666666.229899.peg.1387
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229899.peg.197
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229899.peg.2281
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229899.peg.197
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229899.peg.1970
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229899.peg.743
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229899.peg.2120
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229899.peg.2142
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229899.peg.743
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229899.peg.2141
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229899.peg.1644
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229899.peg.291
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229899.peg.1604
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229899.peg.197
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229899.peg.2281
Riboflavin_synthesis_cluster	Diacylglycerol kinase (EC 2.7.1.107)	fig|6666666.229899.peg.1112
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229899.peg.197
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229899.peg.2120
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229899.peg.373
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229899.peg.133
Riboflavin_synthesis_cluster	Phosphatidylglycerophosphatase A (EC 3.1.3.27)	fig|6666666.229899.peg.2284
Riboflavin_synthesis_cluster	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.229899.peg.1400
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229899.peg.2141
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229899.peg.1607
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229899.peg.2283
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.229899.peg.2282
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229899.peg.426
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229899.peg.969
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229899.peg.969
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229899.peg.1806
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229899.peg.1808
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229899.peg.2292
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229899.peg.2367
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229899.peg.2289
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229899.peg.2366
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.229899.peg.196
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229899.peg.801
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229899.peg.1000
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229899.peg.1001
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229899.peg.832
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.229899.peg.1526
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.229899.peg.1529
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.229899.peg.81
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.229899.peg.839
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.229899.peg.831
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.229899.peg.773
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.229899.peg.824
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.229899.peg.833
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.229899.peg.885
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229899.peg.1528
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.229899.peg.2238
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.229899.peg.1950
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.229899.peg.775
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.229899.peg.778
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.229899.peg.838
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.229899.peg.45
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.229899.peg.1949
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.229899.peg.1129
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.229899.peg.772
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.229899.peg.777
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.229899.peg.1123
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.229899.peg.1933
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-dependent	fig|6666666.229899.peg.1123
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.229899.peg.1933
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.229899.peg.1223
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.229899.peg.1128
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.229899.peg.1128
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.229899.peg.634
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.229899.peg.829
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.229899.peg.1934
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.229899.peg.780
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.229899.peg.779
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.229899.peg.837
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.229899.peg.834
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229899.peg.1525
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.229899.peg.896
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.229899.peg.781
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.229899.peg.827
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.229899.peg.1000
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.229899.peg.1001
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.229899.peg.828
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.229899.peg.836
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.229899.peg.836
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.229899.peg.671
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.229899.peg.882
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.229899.peg.771
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.229899.peg.897
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.229899.peg.897
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.229899.peg.776
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.229899.peg.137
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.229899.peg.745
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.229899.peg.763
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.229899.peg.1106
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.229899.peg.774
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.229899.peg.826
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.229899.peg.832
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.229899.peg.899
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.229899.peg.1002
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.229899.peg.835
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.229899.peg.80
Ribosome_activity_modulation	Ribosome hibernation protein YfiA	fig|6666666.229899.peg.1497
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229899.peg.883
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229899.peg.1234
Ribosome_biogenesis_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.229899.peg.1929
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.1470
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.2252
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229899.peg.1926
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229899.peg.875
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.229899.peg.1493
Ribosome_biogenesis_bacterial	Ribosomal protein S6 glutaminyl transferase	fig|6666666.229899.peg.484
Ribosome_biogenesis_bacterial	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229899.peg.1990
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229899.peg.1175
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229899.peg.2310
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229899.peg.884
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229899.peg.980
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229899.peg.1106
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229899.peg.1108
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229899.peg.982
Rrf2_family_transcriptional_regulators	Iron-sulfur cluster regulator IscR	fig|6666666.229899.peg.1908
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.229899.peg.1972
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229899.peg.1970
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229899.peg.1973
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229899.peg.1974
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	HflC protein	fig|6666666.229899.peg.594
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	HflK protein	fig|6666666.229899.peg.593
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229899.peg.1900
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229899.peg.441
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like	fig|6666666.229899.peg.1899
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229899.peg.2182
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229899.peg.444
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.229899.peg.946
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229899.peg.281
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.229899.peg.947
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229899.peg.2077
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229899.peg.2079
Septum_site-determining_cluster_Min	Septum site-determining protein MinC	fig|6666666.229899.peg.2155
Serine-glyoxylate_cycle	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229899.peg.208
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229899.peg.877
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229899.peg.786
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.229899.peg.1074
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.1553
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229899.peg.2187
Serine-glyoxylate_cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229899.peg.191
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229899.peg.1314
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229899.peg.1314
Serine-glyoxylate_cycle	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229899.peg.1032
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229899.peg.1996
Serine-glyoxylate_cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229899.peg.1673
Serine-glyoxylate_cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229899.peg.1674
Serine-glyoxylate_cycle	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	fig|6666666.229899.peg.2075
Serine-glyoxylate_cycle	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	fig|6666666.229899.peg.2074
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229899.peg.731
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229899.peg.420
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229899.peg.747
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229899.peg.747
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229899.peg.1996
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229899.peg.739
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229899.peg.1942
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229899.peg.2215
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229899.peg.2216
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229899.peg.1040
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229899.peg.1288
Sialic_Acid_Metabolism	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229899.peg.328
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229899.peg.1288
Sialic_Acid_Metabolism	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.229899.peg.327
Sialic_Acid_Metabolism	N-acetylmannosamine kinase (EC 2.7.1.60)	fig|6666666.229899.peg.331
Sialic_Acid_Metabolism	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)	fig|6666666.229899.peg.332
Sialic_Acid_Metabolism	N-acetylneuraminate lyase (EC 4.1.3.3)	fig|6666666.229899.peg.329
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229899.peg.336
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229899.peg.351
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229899.peg.352
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229899.peg.336
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229899.peg.351
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229899.peg.352
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229899.peg.336
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229899.peg.351
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229899.peg.352
Sialic_Acid_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.229899.peg.1322
Sialic_Acid_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.229899.peg.1570
Sialic_Acid_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229899.peg.1322
Sialic_Acid_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229899.peg.1570
Sialic_Acid_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229899.peg.1321
Sialic_Acid_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229899.peg.1571
Sialic_Acid_Metabolism	PTS system, mannose-specific IID component (EC 2.7.1.69)	fig|6666666.229899.peg.1320
Sialic_Acid_Metabolism	PTS system, mannose-specific IID component (EC 2.7.1.69)	fig|6666666.229899.peg.1572
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229899.peg.1783
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229899.peg.2158
Sialic_Acid_Metabolism	Putative sugar isomerase involved in processing of exogenous sialic acid	fig|6666666.229899.peg.1545
Sialic_Acid_Metabolism	Sialic acid utilization regulator, RpiR family	fig|6666666.229899.peg.330
Sialic_Acid_Metabolism	Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase	fig|6666666.229899.peg.335
Sialic_Acid_Metabolism	TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter	fig|6666666.229899.peg.334
Sialic_Acid_Metabolism	TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein	fig|6666666.229899.peg.333
Sialic_Acid_Metabolism	TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter	fig|6666666.229899.peg.334
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229899.peg.739
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229899.peg.627
Single-Rhodanese-domain_proteins	Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1)	fig|6666666.229899.peg.991
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome C553 (soluble cytochrome f)	fig|6666666.229899.peg.312
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.229899.peg.649
Soluble_cytochromes_and_functionally_related_electron_carriers	Ferredoxin	fig|6666666.229899.peg.2287
Soluble_cytochromes_and_functionally_related_electron_carriers	Ferredoxin, 2Fe-2S	fig|6666666.229899.peg.1902
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229899.peg.749
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.229899.peg.393
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229899.peg.1315
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.229899.peg.1792
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229899.peg.897
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229899.peg.1944
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229899.peg.1945
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229899.peg.1610
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229899.peg.1609
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.229899.peg.1612
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229899.peg.1608
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229899.peg.1703
Stationary_phase_repair_cluster	FIG139438: lipoprotein B	fig|6666666.229899.peg.1613
Stationary_phase_repair_cluster	Lipoprotein NlpD	fig|6666666.229899.peg.1615
Stationary_phase_repair_cluster	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229899.peg.1611
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.229899.peg.1111
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.229899.peg.1593
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.229899.peg.1593
Succinate_dehydrogenase	Fumarate reductase subunit C	fig|6666666.229899.peg.1675
Succinate_dehydrogenase	Fumarate reductase subunit D	fig|6666666.229899.peg.1676
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229899.peg.1673
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229899.peg.1674
Sulfate_reduction-associated_complexes	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229899.peg.2028
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229899.peg.2028
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229899.peg.1249
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229899.peg.1250
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229899.peg.1251
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229899.peg.870
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229899.peg.871
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.229899.peg.2071
TCA_Cycle	Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	fig|6666666.229899.peg.1627
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229899.peg.254
TCA_Cycle	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	fig|6666666.229899.peg.254
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.229899.peg.2072
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.229899.peg.481
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229899.peg.191
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229899.peg.1673
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229899.peg.1674
TCA_Cycle	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	fig|6666666.229899.peg.2075
TCA_Cycle	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	fig|6666666.229899.peg.2074
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, large permease component	fig|6666666.229899.peg.723
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, large permease component	fig|6666666.229899.peg.724
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, periplasmic component	fig|6666666.229899.peg.725
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229899.peg.1609
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229899.peg.1326
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229899.peg.298
Tellurite_resistance:_Chromosomal_determinants	Tellurite resistance protein TehB	fig|6666666.229899.peg.257
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.229899.peg.1976
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229899.peg.1977
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229899.peg.2129
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229899.peg.1259
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229899.peg.2130
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.229899.peg.1976
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229899.peg.1977
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229899.peg.2129
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229899.peg.1259
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229899.peg.2130
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229899.peg.1003
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229899.peg.1003
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229899.peg.2244
Thiamin_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229899.peg.1907
Thiamin_biosynthesis	Rhodanese-like domain required for thiamine synthesis	fig|6666666.229899.peg.71
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229899.peg.103
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229899.peg.2048
Thiamin_biosynthesis	Thiamin ABC transporter, substrate-binding component	fig|6666666.229899.peg.2046
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229899.peg.2047
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229899.peg.2283
Thiamin_biosynthesis	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229899.peg.71
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.229899.peg.1256
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229899.peg.580
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.229899.peg.325
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229899.peg.2131
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229899.peg.264
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229899.peg.265
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.229899.peg.700
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.5
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.6
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.7
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.675
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.1336
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229899.peg.1337
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229899.peg.1396
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229899.peg.2146
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.229899.peg.588
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.229899.peg.588
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229899.peg.589
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229899.peg.591
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.229899.peg.1979
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.229899.peg.1190
Ton_and_Tol_transport_systems	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229899.peg.1189
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229899.peg.1191
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.229899.peg.1980
Ton_and_Tol_transport_systems	Peptidoglycan-associated lipoprotein precursor	fig|6666666.229899.peg.1984
Ton_and_Tol_transport_systems	Tol biopolymer transport system, TolR protein	fig|6666666.229899.peg.1981
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229899.peg.579
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229899.peg.1982
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229899.peg.2330
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229899.peg.2335
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229899.peg.2336
Ton_and_Tol_transport_systems	tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins	fig|6666666.229899.peg.1983
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229899.peg.391
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229899.peg.910
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229899.peg.2263
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229899.peg.2381
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229899.peg.911
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229899.peg.2262
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229899.peg.2382
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229899.peg.76
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229899.peg.428
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229899.peg.78
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229899.peg.429
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229899.peg.392
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229899.peg.2107
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229899.peg.2106
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229899.peg.295
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229899.peg.1009
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229899.peg.1017
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229899.peg.1530
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229899.peg.2137
Transcription_factors_bacterial	Transcription elongation factor GreB	fig|6666666.229899.peg.1018
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229899.peg.1231
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229899.peg.294
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229899.peg.2282
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229899.peg.1712
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229899.peg.765
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoE	fig|6666666.229899.peg.942
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoH	fig|6666666.229899.peg.1346
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE negative regulatory protein RseA	fig|6666666.229899.peg.941
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE negative regulatory protein RseB precursor	fig|6666666.229899.peg.940
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE regulatory protein RseC	fig|6666666.229899.peg.939
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229899.peg.797
Transcription_repair_cluster	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229899.peg.1288
Transcription_repair_cluster	LSU ribosomal protein L25p	fig|6666666.229899.peg.45
Transcription_repair_cluster	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229899.peg.1288
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229899.peg.749
Transcription_repair_cluster	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229899.peg.414
Transcription_repair_cluster	Transcription-repair coupling factor	fig|6666666.229899.peg.1712
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229899.peg.1003
Translation_elongation_factor_P_lysylation	Lysyl-lysine 2,3-aminomutase	fig|6666666.229899.peg.602
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.229899.peg.603
Translation_elongation_factor_P_lysylation	Translation elongation factor P Lys34:lysine transferase	fig|6666666.229899.peg.1671
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229899.peg.1003
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.229899.peg.626
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.229899.peg.603
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.229899.peg.1108
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229899.peg.925
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229899.peg.1004
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229899.peg.809
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229899.peg.292
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229899.peg.1622
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229899.peg.293
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229899.peg.2236
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.229899.peg.132
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229899.peg.301
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229899.peg.2150
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229899.peg.224
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.229899.peg.158
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229899.peg.810
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229899.peg.749
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229899.peg.2151
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229899.peg.980
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229899.peg.1944
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229899.peg.1945
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229899.peg.214
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229899.peg.215
Transport_of_Nickel_and_Cobalt	Additional component NikL of nickel ECF transporter	fig|6666666.229899.peg.217
Transport_of_Nickel_and_Cobalt	Additional periplasmic component NikK of nickel ECF transporter	fig|6666666.229899.peg.218
Transport_of_Nickel_and_Cobalt	Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)	fig|6666666.229899.peg.1200
Transport_of_Nickel_and_Cobalt	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229899.peg.216
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229899.peg.814
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229899.peg.815
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229899.peg.816
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229899.peg.813
Transport_system_clustering_with_HemG	Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)	fig|6666666.229899.peg.812
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229899.peg.51
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229899.peg.50
Trehalose_Uptake_and_Utilization	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)	fig|6666666.229899.peg.2305
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229899.peg.1760
Triacylglycerol_metabolism	Lysophospholipase L2 (EC 3.1.1.5)	fig|6666666.229899.peg.920
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229899.peg.2224
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229899.peg.2383
Tryptophan_synthesis	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.229899.peg.2385
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.229899.peg.2386
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229899.peg.2380
Tryptophan_synthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229899.peg.2226
Tryptophan_synthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229899.peg.2225
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229899.peg.2380
Tryptophan_synthesis	Transcriptional repressor protein TrpR	fig|6666666.229899.peg.1658
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229899.peg.2368
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229899.peg.2369
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.229899.peg.844
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.229899.peg.843
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.229899.peg.842
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.229899.peg.1706
Type_IV_pilus	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229899.peg.1146
Type_IV_pilus	Leader peptidase (Prepilin peptidase) (EC 3.4.23.43)	fig|6666666.229899.peg.1540
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229899.peg.304
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229899.peg.506
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229899.peg.1139
Type_IV_pilus	N-methyltransferase (EC 2.1.1.-)	fig|6666666.229899.peg.1540
Type_IV_pilus	Type IV fimbrial assembly protein PilC	fig|6666666.229899.peg.1541
Type_IV_pilus	Type IV fimbrial assembly, ATPase PilB	fig|6666666.229899.peg.1542
Type_IV_pilus	Type IV pilin PilA	fig|6666666.229899.peg.1543
Type_IV_pilus	Type IV pilus biogenesis protein PilM	fig|6666666.229899.peg.1140
Type_IV_pilus	Type IV pilus biogenesis protein PilN	fig|6666666.229899.peg.1141
Type_IV_pilus	Type IV pilus biogenesis protein PilQ	fig|6666666.229899.peg.1143
Type_IV_pilus	Type IV pilus biogenesis protein PilQ	fig|6666666.229899.peg.1144
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229899.peg.1040
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229899.peg.1288
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229899.peg.1288
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229899.peg.1783
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229899.peg.2158
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229899.peg.1349
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229899.peg.570
USS-DB-7	ClpB protein	fig|6666666.229899.peg.958
USS-DB-7	ClpB protein	fig|6666666.229899.peg.959
USS-DB-7	ClpB protein	fig|6666666.229899.peg.1394
Ubiquinone_Biosynthesis	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-)	fig|6666666.229899.peg.1953
Ubiquinone_Biosynthesis	Chorismate--pyruvate lyase (EC 4.1.3.40)	fig|6666666.229899.peg.1595
Ubiquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229899.peg.639
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229899.peg.750
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229899.peg.532
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229899.peg.1787
Universal_GTPases	GTP-binding protein Era	fig|6666666.229899.peg.629
Universal_GTPases	GTP-binding protein HflX	fig|6666666.229899.peg.2177
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229899.peg.1946
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.229899.peg.577
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229899.peg.630
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229899.peg.2209
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229899.peg.1568
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229899.peg.1186
Universal_GTPases	Translation elongation factor G	fig|6666666.229899.peg.1003
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229899.peg.626
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229899.peg.925
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229899.peg.1004
Universal_GTPases	Translation initiation factor 2	fig|6666666.229899.peg.293
Universal_stress_protein_family	Universal stress protein A	fig|6666666.229899.peg.1064
Universal_stress_protein_family	Universal stress protein E	fig|6666666.229899.peg.13
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229899.peg.381
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.229899.peg.2052
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.229899.peg.46
Uptake_of_selenate_and_selenite	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.229899.peg.2298
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.229899.peg.624
Utilization_of_glutathione_as_a_sulphur_source	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229899.peg.163
VC0266	Hypothetical protein VC0266 (sugar utilization related?)	fig|6666666.229899.peg.751
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229899.peg.193
Widespread_colonization_island	Flp pilus assembly membrane protein TadE	fig|6666666.229899.peg.1729
Widespread_colonization_island	Flp pilus assembly protein RcpB	fig|6666666.229899.peg.1723
Widespread_colonization_island	Flp pilus assembly protein RcpC/CpaB	fig|6666666.229899.peg.1721
Widespread_colonization_island	Flp pilus assembly protein TadB	fig|6666666.229899.peg.1726
Widespread_colonization_island	Flp pilus assembly protein TadD, contains TPR repeat	fig|6666666.229899.peg.1728
Widespread_colonization_island	Flp pilus assembly protein, pilin Flp	fig|6666666.229899.peg.1719
Widespread_colonization_island	Flp pilus assembly surface protein TadF, ATP/GTP-binding motif	fig|6666666.229899.peg.1730
Widespread_colonization_island	Protein TadG, associated with Flp pilus assembly	fig|6666666.229899.peg.1731
Widespread_colonization_island	Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily	fig|6666666.229899.peg.1725
Widespread_colonization_island	Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly	fig|6666666.229899.peg.1724
Widespread_colonization_island	Type II/IV secretion system protein TadC, associated with Flp pilus assembly	fig|6666666.229899.peg.1727
Widespread_colonization_island	Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly	fig|6666666.229899.peg.1722
Widespread_colonization_island	Type IV prepilin peptidase TadV/CpaA	fig|6666666.229899.peg.1720
Xylose_utilization	D-xylose transport ATP-binding protein XylG	fig|6666666.229899.peg.1339
Xylose_utilization	Xylose ABC transporter, periplasmic xylose-binding protein XylF	fig|6666666.229899.peg.1340
Xylose_utilization	Xylose ABC transporter, permease protein XylH	fig|6666666.229899.peg.1338
Xylose_utilization	Xylose activator XylR (AraC family)	fig|6666666.229899.peg.1334
Xylose_utilization	Xylose isomerase (EC 5.3.1.5)	fig|6666666.229899.peg.1341
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229899.peg.1342
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229899.peg.1343
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229899.peg.1775
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.229899.peg.1805
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229899.peg.2310
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229899.peg.761
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229899.peg.2310
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229899.peg.2182
YrdC-YciO-Sua5_protein_family	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229899.peg.10
YrdC-YciO-Sua5_protein_family	Hypothetical YciO protein, TsaC/YrdC paralog	fig|6666666.229899.peg.249
YrdC-YciO-Sua5_protein_family	Peptide chain release factor 1	fig|6666666.229899.peg.2150
YrdC-YciO-Sua5_protein_family	Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p	fig|6666666.229899.peg.2017
YrdC-YciO-Sua5_protein_family	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229899.peg.2151
YrdC-YciO-Sua5_protein_family	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229899.peg.1990
YrdC-YciO-Sua5_protein_family	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229899.peg.894
YrdC-YciO-Sua5_protein_family	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229899.peg.1996
YrdC-YciO-Sua5_protein_family	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229899.peg.2310
YrdC-YciO-Sua5_protein_family	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229899.peg.761
YrdC-YciO-Sua5_protein_family	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229899.peg.2182
Zinc_regulated_enzymes	C4-type zinc finger protein, DksA/TraR family	fig|6666666.229899.peg.269
Zinc_regulated_enzymes	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.229899.peg.380
Zinc_regulated_enzymes	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229899.peg.1801
Zinc_regulated_enzymes	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229899.peg.2135
Zinc_regulated_enzymes	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229899.peg.2181
Zinc_regulated_enzymes	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.229899.peg.1400
Zinc_regulated_enzymes	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.229899.peg.841
Zinc_regulated_enzymes	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229899.peg.464
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.229899.peg.2348
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.229899.peg.2349
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.229899.peg.2350
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.229899.peg.2351
ar-431-EC_Molybdopterin-guanine_dinucleotide_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.229899.peg.1748
ar-431-EC_Molybdopterin-guanine_dinucleotide_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobB	fig|6666666.229899.peg.938
cAMP_signaling_in_bacteria	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.229899.peg.1683
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229899.peg.1512
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229899.peg.119
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229899.peg.407
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229899.peg.1027
cAMP_signaling_in_bacteria	Cyclic AMP receptor protein	fig|6666666.229899.peg.1136
cAMP_signaling_in_bacteria	bifunctional hemolysin-adenylate cyclase precursor	fig|6666666.229899.peg.1998
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229899.peg.1692
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229899.peg.1693
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229899.peg.1697
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229899.peg.1691
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229899.peg.1694
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229899.peg.1695
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229899.peg.1692
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229899.peg.1693
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229899.peg.1691
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229899.peg.1696
dNTP_triphosphohydrolase_protein_family	Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR	fig|6666666.229899.peg.60
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229899.peg.2118
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229899.peg.1907
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA	fig|6666666.229899.peg.2326
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229899.peg.630
mnm5U34_biosynthesis_bacteria	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229899.peg.1644
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusA	fig|6666666.229899.peg.818
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229899.peg.1249
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229899.peg.1250
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229899.peg.1251
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229899.peg.1270
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229899.peg.1811
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229899.peg.2312
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229899.peg.2313
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229899.peg.11
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229899.peg.1155
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229899.peg.171
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229899.peg.1364
pyrimidine_conversions	Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)	fig|6666666.229899.peg.615
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.229899.peg.1402
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229899.peg.2057
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229899.peg.138
pyrimidine_conversions	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229899.peg.1062
pyrimidine_conversions	Deoxycytidine triphosphate deaminase (EC 3.5.4.13)	fig|6666666.229899.peg.535
pyrimidine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229899.peg.1619
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229899.peg.1575
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229899.peg.2131
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.229899.peg.759
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229899.peg.1773
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.229899.peg.1890
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229899.peg.714
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229899.peg.1177
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48) [C1]	fig|6666666.229899.peg.536
pyrimidine_conversions	Uridine phosphorylase (EC 2.4.2.3)	fig|6666666.229899.peg.795
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229899.peg.1604
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229899.peg.743
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229899.peg.743
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229899.peg.2141
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229899.peg.1623
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.229899.peg.1623
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1188
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1624
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229899.peg.1777
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229899.peg.1717
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229899.peg.1718
tRNA-methylthiotransferase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229899.peg.1718
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229899.peg.1955
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229899.peg.1065
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229899.peg.1876
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229899.peg.2147
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229899.peg.2354
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229899.peg.1965
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229899.peg.1801
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.229899.peg.2261
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229899.peg.1821
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229899.peg.1409
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229899.peg.1403
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229899.peg.708
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229899.peg.740
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229899.peg.1168
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.229899.peg.225
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229899.peg.1900
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229899.peg.2391
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229899.peg.2392
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.229899.peg.2145
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.229899.peg.945
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229899.peg.2056
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229899.peg.2230
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229899.peg.1605
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229899.peg.288
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229899.peg.478
tRNA_modification_Archaea	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229899.peg.2354
tRNA_modification_Archaea	COG1720: Uncharacterized conserved protein	fig|6666666.229899.peg.1560
tRNA_modification_Archaea	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229899.peg.1907
tRNA_modification_Archaea	Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA	fig|6666666.229899.peg.2326
tRNA_modification_Archaea	GTP-binding protein Era	fig|6666666.229899.peg.629
tRNA_modification_Archaea	Iron-sulfur cluster assembly scaffold protein IscU	fig|6666666.229899.peg.1906
tRNA_modification_Archaea	Predicted P-loop ATPase fused to an acetyltransferase COG1444	fig|6666666.229899.peg.1715
tRNA_modification_Archaea	Rhodanese-like domain required for thiamine synthesis	fig|6666666.229899.peg.71
tRNA_modification_Archaea	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229899.peg.884
tRNA_modification_Archaea	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229899.peg.1752
tRNA_modification_Archaea	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229899.peg.71
tRNA_modification_Archaea	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229899.peg.1494
tRNA_modification_Archaea	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229899.peg.1611
tRNA_modification_Archaea	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.79
tRNA_modification_Archaea	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.1602
tRNA_modification_Archaea	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229899.peg.2328
tRNA_modification_Archaea	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229899.peg.1955
tRNA_modification_Archaea	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229899.peg.1909
tRNA_modification_Bacteria	Believed to be involved in assembly of Fe-S clusters	fig|6666666.229899.peg.1901
tRNA_modification_Bacteria	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229899.peg.10
tRNA_modification_Bacteria	COG1720: Uncharacterized conserved protein	fig|6666666.229899.peg.1560
tRNA_modification_Bacteria	Chaperone protein HscA	fig|6666666.229899.peg.1903
tRNA_modification_Bacteria	Chaperone protein HscB	fig|6666666.229899.peg.1904
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229899.peg.1907
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229899.peg.2057
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229899.peg.1772
tRNA_modification_Bacteria	Ferredoxin, 2Fe-2S	fig|6666666.229899.peg.1902
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229899.peg.2135
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229899.peg.630
tRNA_modification_Bacteria	Iron binding protein IscA for iron-sulfur cluster assembly	fig|6666666.229899.peg.1905
tRNA_modification_Bacteria	Iron-sulfur cluster assembly scaffold protein IscU	fig|6666666.229899.peg.1906
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229899.peg.1234
tRNA_modification_Bacteria	Predicted P-loop ATPase fused to an acetyltransferase COG1444	fig|6666666.229899.peg.1715
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.229899.peg.1680
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.229899.peg.465
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229899.peg.464
tRNA_modification_Bacteria	Rhodanese-like domain required for thiamine synthesis	fig|6666666.229899.peg.71
tRNA_modification_Bacteria	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.1470
tRNA_modification_Bacteria	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.2252
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229899.peg.441
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229899.peg.281
tRNA_modification_Bacteria	hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]	fig|6666666.229899.peg.913
tRNA_modification_Bacteria	tRNA (5-methoxyuridine) 34 synthase	fig|6666666.229899.peg.528
tRNA_modification_Bacteria	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229899.peg.1644
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229899.peg.884
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229899.peg.1094
tRNA_modification_Bacteria	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229899.peg.1752
tRNA_modification_Bacteria	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	fig|6666666.229899.peg.1963
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusA	fig|6666666.229899.peg.818
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229899.peg.1249
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229899.peg.1250
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229899.peg.1251
tRNA_modification_Bacteria	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229899.peg.71
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229899.peg.1494
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229899.peg.2179
tRNA_modification_Bacteria	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229899.peg.1611
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.79
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.1602
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229899.peg.291
tRNA_modification_Bacteria	tRNA pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229899.peg.91
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229899.peg.1270
tRNA_modification_Bacteria	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229899.peg.2328
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229899.peg.398
tRNA_modification_Bacteria	tRNA-dihydrouridine synthase C (EC 1.-.-.-)	fig|6666666.229899.peg.1099
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229899.peg.444
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229899.peg.1955
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229899.peg.1891
tRNA_modification_Bacteria	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229899.peg.1909
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229899.peg.411
tRNA_processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.229899.peg.2314
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229899.peg.633
tRNA_processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.229899.peg.1102
tRNA_processing	Ribonuclease T (EC 3.1.13.-)	fig|6666666.229899.peg.1958
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229899.peg.2179
tRNA_processing	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229899.peg.1611
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.79
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229899.peg.1602
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229899.peg.291
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229899.peg.398
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229899.peg.1955
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229899.peg.1891
tRNAmodification_position_34	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229899.peg.630
tRNAmodification_position_34	Predicted P-loop ATPase fused to an acetyltransferase COG1444	fig|6666666.229899.peg.1715
tRNAmodification_position_34	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229899.peg.441
tRNAmodification_position_34	tRNA (5-methoxyuridine) 34 synthase	fig|6666666.229899.peg.528
tRNAmodification_position_34	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229899.peg.1644
tRNAmodification_position_34	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	fig|6666666.229899.peg.1963
tRNAmodification_position_34	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229899.peg.1270
tRNAmodification_position_34	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229899.peg.398
tRNAmodification_position_34	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229899.peg.444
tRNAmodification_position_34	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229899.peg.1891
tRNAs	tRNA-Ala-GGC	fig|6666666.229899.rna.64
tRNAs	tRNA-Arg-ACG	fig|6666666.229899.rna.43
tRNAs	tRNA-Arg-ACG	fig|6666666.229899.rna.44
tRNAs	tRNA-Arg-CCG	fig|6666666.229899.rna.14
tRNAs	tRNA-Cys-GCA	fig|6666666.229899.rna.66
tRNAs	tRNA-Gly-GCC	fig|6666666.229899.rna.22
tRNAs	tRNA-Gly-GCC	fig|6666666.229899.rna.67
tRNAs	tRNA-Gly-GCC	fig|6666666.229899.rna.76
tRNAs	tRNA-Leu-CAA	fig|6666666.229899.rna.1
tRNAs	tRNA-Leu-CAG	fig|6666666.229899.rna.55
tRNAs	tRNA-Leu-GAG	fig|6666666.229899.rna.56
tRNAs	tRNA-Phe-GAA	fig|6666666.229899.rna.38
tRNAs	tRNA-Ser-GGA	fig|6666666.229899.rna.26
tRNAs	tRNA-Trp-CCA	fig|6666666.229899.rna.5
tRNAs	tRNA-Val-GAC	fig|6666666.229899.rna.2
