16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229914.peg.1083
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229914.peg.1084
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.229914.peg.1086
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229914.peg.366
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229914.peg.1085
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229914.peg.1517
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229914.peg.986
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229914.peg.1575
2-phosphoglycolate_salvage	Putative phosphatase YqaB	fig|6666666.229914.peg.325
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229914.peg.2065
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229914.peg.610
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229914.peg.1058
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229914.peg.1446
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.229914.peg.341
5-FCL-like_protein	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229914.peg.2114
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229914.peg.2113
5-FCL-like_protein	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.229914.peg.1911
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229914.peg.223
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229914.peg.2115
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229914.peg.1376
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229914.peg.1054
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229914.peg.1709
ABC_transporter_of_unknown_substrate_X	Possible ABC transporter, periplasmic substrate X binding protein precursor	fig|6666666.229914.peg.2136
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, ATP-binding subunit	fig|6666666.229914.peg.2139
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, permease subunit I	fig|6666666.229914.peg.2138
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, permease subunit II	fig|6666666.229914.peg.2137
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229914.peg.1323
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229914.peg.1640
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229914.peg.1641
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229914.peg.1318
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229914.peg.1317
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229914.peg.1320
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229914.peg.1321
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229914.peg.1322
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229914.peg.1319
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.229914.peg.2174
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229914.peg.1480
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.229914.peg.1544
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Outer membrane lipoprotein LolB	fig|6666666.229914.peg.1481
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229914.peg.2176
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229914.peg.2175
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229914.peg.1479
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	FIG138056: a glutathione-dependent thiol reductase	fig|6666666.229914.peg.1067
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229914.peg.1066
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229914.peg.2417
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229914.peg.2431
A_conserved_operon_linked_to_TyrR_and_possibly_involved_in_virulence	Conserved protein YcjX with nucleoside triphosphate hydrolase domain	fig|6666666.229914.peg.1598
A_conserved_operon_linked_to_TyrR_and_possibly_involved_in_virulence	Membrane protein YcjF	fig|6666666.229914.peg.1599
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.229914.peg.655
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.229914.peg.656
Acyl-CoA_thioesterase_II	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.229914.peg.2198
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229914.peg.2076
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229914.peg.201
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229914.peg.2076
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.229914.peg.1704
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229914.peg.2048
Alanine_biosynthesis	Chaperone protein HscA	fig|6666666.229914.peg.1285
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229914.peg.1289
Alanine_biosynthesis	Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA	fig|6666666.229914.peg.1752
Alanine_biosynthesis	Ferredoxin, 2Fe-2S	fig|6666666.229914.peg.1284
Alanine_biosynthesis	HTH-type transcriptional regulator IlvY	fig|6666666.229914.peg.664
Alanine_biosynthesis	Iron binding protein IscA for iron-sulfur cluster assembly	fig|6666666.229914.peg.1287
Alanine_biosynthesis	Iron-sulfur cluster assembly scaffold protein IscU	fig|6666666.229914.peg.1288
Alanine_biosynthesis	Iron-sulfur cluster regulator IscR	fig|6666666.229914.peg.1290
Alkylphosphonate_utilization	Alkylphosphonate utilization operon protein PhnA	fig|6666666.229914.peg.1680
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.449
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.1612
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229914.peg.1728
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229914.peg.2062
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.229914.peg.1830
Aminopeptidases_(EC_3.4.11.-)	Peptidase B (EC 3.4.11.23)	fig|6666666.229914.peg.1000
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229914.peg.613
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229914.peg.1464
Ammonia_assimilation	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.229914.peg.2010
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229914.peg.2407
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.229914.peg.1148
Ammonia_assimilation	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.229914.peg.1588
Anaerobic_respiratory_reductases	Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)	fig|6666666.229914.peg.317
Anaerobic_respiratory_reductases	Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)	fig|6666666.229914.peg.315
Anaerobic_respiratory_reductases	Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)	fig|6666666.229914.peg.316
Anaerobic_respiratory_reductases	Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)	fig|6666666.229914.peg.314
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229914.peg.165
Anaerobic_respiratory_reductases	Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)	fig|6666666.229914.peg.2242
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229914.peg.1670
Archaeal_lipids	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229914.peg.154
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229914.peg.1670
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229914.peg.1670
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229914.peg.2044
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.229914.peg.1198
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.229914.peg.2016
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229914.peg.1066
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229914.peg.158
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229914.peg.2044
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.229914.peg.1198
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.229914.peg.2016
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229914.peg.1066
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229914.peg.158
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229914.peg.2044
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.229914.peg.156
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229914.peg.157
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229914.peg.158
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, ATP-binding protein ArtP	fig|6666666.229914.peg.1091
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, periplasmic arginine-binding protein ArtI	fig|6666666.229914.peg.1090
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, permease protein ArtM	fig|6666666.229914.peg.1088
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, permease protein ArtQ	fig|6666666.229914.peg.1089
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229914.peg.2044
Arginine_and_Ornithine_Degradation	Arginine/ornithine antiporter ArcD	fig|6666666.229914.peg.156
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229914.peg.157
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229914.peg.1197
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229914.peg.158
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229914.peg.2437
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229914.peg.165
Arsenic_resistance	Arsenic efflux pump protein	fig|6666666.229914.peg.445
Arsenic_resistance	Arsenic efflux pump protein	fig|6666666.229914.peg.2057
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component	fig|6666666.229914.peg.1784
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	fig|6666666.229914.peg.1785
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD	fig|6666666.229914.peg.1786
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	fig|6666666.229914.peg.1787
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	fig|6666666.229914.peg.2135
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)	fig|6666666.229914.peg.1788
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)	fig|6666666.229914.peg.1782
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) modifying protein LsrG	fig|6666666.229914.peg.1789
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	LsrR, transcriptional repressor of lsr operon	fig|6666666.229914.peg.1783
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229914.peg.328
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229914.peg.1809
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229914.peg.1805
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229914.peg.1806
Auxin_biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229914.peg.1793
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229914.peg.1794
Bacterial_Cell_Division	Cell division protein BolA	fig|6666666.229914.peg.824
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229914.peg.988
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229914.peg.1073
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229914.peg.1909
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229914.peg.1083
Bacterial_Cell_Division	Cell division protein FtsJ	fig|6666666.229914.peg.1910
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229914.peg.2285
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229914.peg.1084
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229914.peg.1074
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229914.peg.1078
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229914.peg.211
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229914.peg.1580
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229914.peg.1072
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.229914.peg.1086
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.229914.peg.210
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229914.peg.2429
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229914.peg.2355
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229914.peg.2463
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229914.peg.621
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229914.peg.620
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229914.peg.619
Bacterial_Cell_Division	Septum site-determining protein MinC	fig|6666666.229914.peg.2171
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229914.peg.209
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229914.peg.1085
Bacterial_Chemotaxis	Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)	fig|6666666.229914.peg.1017
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229914.peg.1728
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229914.peg.988
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229914.peg.1073
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229914.peg.1083
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229914.peg.2285
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229914.peg.1084
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229914.peg.1074
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229914.peg.1078
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229914.peg.1072
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.229914.peg.1086
Bacterial_Cytoskeleton	Cell division protein ZipA	fig|6666666.229914.peg.123
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229914.peg.621
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229914.peg.620
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229914.peg.619
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229914.peg.367
Bacterial_Cytoskeleton	Septum site-determining protein MinC	fig|6666666.229914.peg.2171
Bacterial_Cytoskeleton	Z-ring-associated protein ZapA	fig|6666666.229914.peg.611
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229914.peg.2285
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229914.peg.1358
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ferric uptake regulation protein FUR	fig|6666666.229914.peg.1932
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229914.peg.178
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229914.peg.456
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229914.peg.1370
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229914.peg.175
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229914.peg.1735
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229914.peg.128
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229914.peg.209
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229914.peg.925
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229914.peg.883
Beta-lactamase	Negative regulator of beta-lactamase expression	fig|6666666.229914.peg.1962
Biofilm_Adhesin_Biosynthesis	Biofilm PGA outer membrane secretin PgaA	fig|6666666.229914.peg.199
Biofilm_Adhesin_Biosynthesis	Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-)	fig|6666666.229914.peg.196
Biofilm_Adhesin_Biosynthesis	Biofilm PGA synthesis deacetylase PgaB (EC 3.-)	fig|6666666.229914.peg.197
Biofilm_Adhesin_Biosynthesis	Biofilm PGA synthesis deacetylase PgaB (EC 3.-)	fig|6666666.229914.peg.198
Biogenesis_of_c-type_cytochromes	ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA	fig|6666666.229914.peg.26
Biogenesis_of_c-type_cytochromes	ABC transporter involved in cytochrome c biogenesis, CcmB subunit	fig|6666666.229914.peg.25
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmF	fig|6666666.229914.peg.20
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmH	fig|6666666.229914.peg.17
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmL	fig|6666666.229914.peg.18
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE	fig|6666666.229914.peg.23
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE	fig|6666666.229914.peg.24
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE	fig|6666666.229914.peg.22
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmE, heme chaperone	fig|6666666.229914.peg.21
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase	fig|6666666.229914.peg.19
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.229914.peg.1312
Biogenesis_of_c-type_cytochromes	Periplasmic thiol:disulfide interchange protein DsbA	fig|6666666.229914.peg.1128
Biogenesis_of_c-type_cytochromes	Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation	fig|6666666.229914.peg.45
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.229914.peg.916
Biogenesis_of_cytochrome_c_oxidases	Ferredoxin--NADP(+) reductase (EC 1.18.1.2)	fig|6666666.229914.peg.1660
Biogenesis_of_cytochrome_c_oxidases	Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly	fig|6666666.229914.peg.731
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.229914.peg.349
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229914.peg.781
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229914.peg.1059
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.229914.peg.348
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.229914.peg.2288
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.229914.peg.351
Biotin_biosynthesis	Biotin synthesis protein BioG	fig|6666666.229914.peg.350
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229914.peg.2158
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229914.peg.352
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229914.peg.1781
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229914.peg.1189
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229914.peg.1737
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229914.peg.1738
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.229914.peg.349
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.229914.peg.348
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.229914.peg.2288
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.229914.peg.351
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioG	fig|6666666.229914.peg.350
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229914.peg.300
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229914.peg.352
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229914.peg.1781
Biotin_biosynthesis_Experimental	NfuA Fe-S protein maturation	fig|6666666.229914.peg.301
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.229914.peg.349
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229914.peg.781
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229914.peg.1059
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.229914.peg.348
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.229914.peg.2288
Biotin_synthesis_cluster	Biotin synthesis protein BioC	fig|6666666.229914.peg.351
Biotin_synthesis_cluster	Biotin synthesis protein BioG	fig|6666666.229914.peg.350
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229914.peg.2158
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229914.peg.300
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229914.peg.352
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229914.peg.1781
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229914.peg.1189
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229914.peg.1737
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229914.peg.1738
Biotin_synthesis_cluster	tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)	fig|6666666.229914.peg.1166
Biphenyl_Degradation	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229914.peg.1446
Broadly_distributed_proteins_not_in_subsystems	FIG001943: hypothetical protein YajQ	fig|6666666.229914.peg.115
Broadly_distributed_proteins_not_in_subsystems	FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster	fig|6666666.229914.peg.2132
Broadly_distributed_proteins_not_in_subsystems	UPF0225 protein YchJ	fig|6666666.229914.peg.783
Broadly_distributed_proteins_not_in_subsystems	UPF0265 protein YeeX	fig|6666666.229914.peg.1474
Broadly_distributed_proteins_not_in_subsystems	YciL protein	fig|6666666.229914.peg.1035
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.229914.peg.51
Broadly_distributed_proteins_not_in_subsystems	YrbA protein	fig|6666666.229914.peg.2400
Butanol_Biosynthesis	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229914.peg.1446
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229914.peg.154
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229914.peg.1058
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229914.peg.1446
Butanol_Biosynthesis	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229914.peg.2446
Butanol_Biosynthesis	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229914.peg.2447
Butanol_Biosynthesis	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229914.peg.2459
CBSS-12149.1.peg.3301	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229914.peg.2401
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, ATP-binding protein YrbF	fig|6666666.229914.peg.2395
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, auxiliary component YrbC	fig|6666666.229914.peg.2398
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, periplasmic component YrbD	fig|6666666.229914.peg.2397
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, permease component YrbE	fig|6666666.229914.peg.2396
CBSS-12149.1.peg.3301	Uncharacterized protein YrbB	fig|6666666.229914.peg.2399
CBSS-12149.1.peg.3301	YrbA protein	fig|6666666.229914.peg.2400
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229914.peg.2151
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229914.peg.1959
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229914.peg.2152
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229914.peg.2150
CBSS-160492.1.peg.550	21 kDa hemolysin precursor	fig|6666666.229914.peg.1513
CBSS-160492.1.peg.550	LppC putative lipoprotein	fig|6666666.229914.peg.1516
CBSS-160492.1.peg.550	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229914.peg.1514
CBSS-160492.1.peg.550	Predicted endonuclease distantly related to archaeal Holliday junction resolvase	fig|6666666.229914.peg.1515
CBSS-160492.1.peg.550	rRNA small subunit methyltransferase I	fig|6666666.229914.peg.1517
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229914.peg.1326
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229914.peg.1330
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229914.peg.1329
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.229914.peg.846
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.229914.peg.185
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.229914.peg.848
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.229914.peg.184
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.229914.peg.2463
CBSS-176299.4.peg.1292	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.229914.peg.184
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229914.peg.2462
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229914.peg.2461
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.229914.peg.1589
CBSS-196164.1.peg.461	Hypothetical, related to broad specificity phosphatases COG0406	fig|6666666.229914.peg.1674
CBSS-208964.1.peg.3826	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229914.peg.2062
CBSS-208964.1.peg.3826	DNA polymerase III chi subunit (EC 2.7.7.7)	fig|6666666.229914.peg.1414
CBSS-208964.1.peg.3826	FIG000906: Predicted Permease	fig|6666666.229914.peg.2064
CBSS-208964.1.peg.3826	FIG000988: Predicted permease	fig|6666666.229914.peg.2063
CBSS-208964.1.peg.3826	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229914.peg.1417
CBSS-208964.1.peg.3988	DNA polymerase III delta subunit (EC 2.7.7.7)	fig|6666666.229914.peg.903
CBSS-208964.1.peg.3988	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229914.peg.904
CBSS-208964.1.peg.3988	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229914.peg.906
CBSS-211586.1.peg.1979	FIG001881: hydrolase of alkaline phosphatase superfamily	fig|6666666.229914.peg.792
CBSS-211586.1.peg.1979	FIG002927: hypothetical protein	fig|6666666.229914.peg.791
CBSS-211586.1.peg.1979	Nucleoid-associated protein NdpA	fig|6666666.229914.peg.790
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229914.peg.1451
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229914.peg.1450
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229914.peg.1449
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229914.peg.1454
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229914.peg.1452
CBSS-211586.9.peg.2729	Acyl-CoA thioesterase YciA, involved in membrane biogenesis	fig|6666666.229914.peg.1034
CBSS-211586.9.peg.2729	Intracellular septation protein IspA	fig|6666666.229914.peg.1033
CBSS-211586.9.peg.2729	YciL protein	fig|6666666.229914.peg.1035
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229914.peg.1064
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.42
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.236
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.237
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.238
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.1829
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.229914.peg.2420
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229914.peg.300
CBSS-216591.1.peg.168	Histone acetyltransferase HPA2 and related acetyltransferases	fig|6666666.229914.peg.518
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229914.peg.2176
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229914.peg.2175
CBSS-221988.1.peg.1679	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229914.peg.524
CBSS-221988.1.peg.1679	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229914.peg.526
CBSS-221988.1.peg.1679	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229914.peg.527
CBSS-221988.1.peg.1679	FIG003021: Membrane protein	fig|6666666.229914.peg.531
CBSS-221988.1.peg.1679	Pantothenate:Na+ symporter (TC 2.A.21.1.1)	fig|6666666.229914.peg.532
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229914.peg.498
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229914.peg.499
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229914.peg.500
CBSS-224911.1.peg.435	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229914.peg.1268
CBSS-224911.1.peg.435	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229914.peg.1161
CBSS-224911.1.peg.435	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229914.peg.1162
CBSS-228400.4.peg.1623	FIG001587: exported protein	fig|6666666.229914.peg.2267
CBSS-228400.4.peg.1623	Hypothetical metal-binding enzyme, YcbL homolog	fig|6666666.229914.peg.2266
CBSS-228400.4.peg.1623	L,D-transpeptidase YcbB	fig|6666666.229914.peg.2268
CBSS-228410.1.peg.134	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.229914.peg.1468
CBSS-228410.1.peg.134	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229914.peg.1542
CBSS-228410.1.peg.134	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229914.peg.1543
CBSS-228410.1.peg.134	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229914.peg.1469
CBSS-228410.1.peg.134	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229914.peg.1470
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229914.peg.741
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229914.peg.742
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229914.peg.749
CBSS-243265.1.peg.198	Transcription elongation factor GreB	fig|6666666.229914.peg.750
CBSS-243277.1.peg.4359	Protein YcgL	fig|6666666.229914.peg.2172
CBSS-243277.1.peg.4359	YcgN (Fragment)	fig|6666666.229914.peg.1689
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229914.peg.358
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229914.peg.2123
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.229914.peg.1563
CBSS-262728.1.peg.1737	Aspartate--ammonia ligase (EC 6.3.1.1)	fig|6666666.229914.peg.161
CBSS-262728.1.peg.1737	Regulatory protein AsnC	fig|6666666.229914.peg.162
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229914.peg.208
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229914.peg.640
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229914.peg.2421
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229914.peg.208
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229914.peg.640
CBSS-269801.1.peg.2186	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	fig|6666666.229914.peg.1883
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229914.peg.1833
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229914.peg.627
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229914.peg.2361
CBSS-290633.1.peg.1906	Mlr7403 protein	fig|6666666.229914.peg.73
CBSS-291331.3.peg.3674	FIG026291: Hypothetical periplasmic protein	fig|6666666.229914.peg.1412
CBSS-292415.3.peg.2341	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229914.peg.1543
CBSS-296591.1.peg.2330	Nucleoside-diphosphate-sugar epimerases	fig|6666666.229914.peg.2015
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229914.peg.1492
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229914.peg.2206
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229914.peg.2207
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229914.peg.2221
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229914.peg.1587
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229914.peg.843
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229914.peg.845
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229914.peg.681
CBSS-312309.3.peg.1965	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.229914.peg.1588
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229914.peg.165
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229914.peg.1307
CBSS-316057.3.peg.1308	DNA-directed RNA polymerase specialized sigma subunit, sigma24-like	fig|6666666.229914.peg.752
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.229914.peg.2010
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229914.peg.2411
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229914.peg.2412
CBSS-316275.9.peg.382	FIG001826: putative inner membrane protein	fig|6666666.229914.peg.342
CBSS-316275.9.peg.382	FIG023911: putative membrane protein	fig|6666666.229914.peg.343
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229914.peg.2076
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229914.peg.2076
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.229914.peg.1149
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.229914.peg.186
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.229914.peg.840
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229914.peg.729
CBSS-323850.3.peg.3269	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229914.peg.291
CBSS-323850.3.peg.3269	Tyrosine recombinase XerC	fig|6666666.229914.peg.290
CBSS-326442.4.peg.1852	ABC-type polar amino acid transport system, ATPase component	fig|6666666.229914.peg.381
CBSS-326442.4.peg.1852	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229914.peg.794
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.229914.peg.727
CBSS-326442.4.peg.1852	Putative TEGT family carrier/transport protein	fig|6666666.229914.peg.2310
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229914.peg.2280
CBSS-326442.4.peg.1852	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229914.peg.2311
CBSS-326442.4.peg.1852	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229914.peg.383
CBSS-326442.4.peg.1852	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229914.peg.384
CBSS-326442.4.peg.1852	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229914.peg.1754
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229914.peg.1042
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229914.peg.519
CBSS-339671.5.peg.589	Cell division protein BolA	fig|6666666.229914.peg.824
CBSS-339671.5.peg.589	Hypothetical lipoprotein YajG precursor	fig|6666666.229914.peg.825
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.229914.peg.1468
CBSS-342610.3.peg.1536	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229914.peg.1542
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229914.peg.1543
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229914.peg.1469
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229914.peg.1470
CBSS-342610.3.peg.1794	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.229914.peg.1063
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229914.peg.1064
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229914.peg.1527
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229914.peg.131
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229914.peg.132
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229914.peg.2355
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229914.peg.620
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229914.peg.619
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229914.peg.2337
CBSS-354.1.peg.876	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229914.peg.918
CBSS-354.1.peg.876	FIG002903: a protein of unknown function perhaps involved in purine metabolism	fig|6666666.229914.peg.917
CBSS-354.1.peg.876	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229914.peg.1024
CBSS-364106.7.peg.3204	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229914.peg.1268
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229914.peg.106
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229914.peg.2235
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229914.peg.125
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229914.peg.2404
CBSS-393130.3.peg.794	Rhodanese-like domain required for thiamine synthesis	fig|6666666.229914.peg.1871
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229914.peg.488
CBSS-393130.3.peg.794	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229914.peg.1871
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229914.peg.1150
CBSS-498211.3.peg.1415	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229914.peg.71
CBSS-498211.3.peg.1415	FIG021952: putative membrane protein	fig|6666666.229914.peg.70
CBSS-498211.3.peg.1415	GTP-binding protein EngA	fig|6666666.229914.peg.2361
CBSS-498211.3.peg.1415	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229914.peg.72
CBSS-498211.3.peg.1415	Mlr7403 protein	fig|6666666.229914.peg.73
CBSS-498211.3.peg.1415	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229914.peg.999
CBSS-498211.3.peg.1415	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229914.peg.68
CBSS-498211.3.peg.1415	Type IV pilus biogenesis protein PilF	fig|6666666.229914.peg.69
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.927
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.1004
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.1154
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229914.peg.1097
CBSS-584.1.peg.1352	FIG009095: D,D-carboxypeptidase family protein	fig|6666666.229914.peg.1065
CBSS-584.1.peg.1352	FIG138056: a glutathione-dependent thiol reductase	fig|6666666.229914.peg.1067
CBSS-584.1.peg.1352	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229914.peg.1066
CBSS-584.1.peg.3382	33 kDa chaperonin (Heat shock protein 33) (HSP33)	fig|6666666.229914.peg.583
CBSS-584.1.peg.3382	FIG001957: putative hydrolase	fig|6666666.229914.peg.585
CBSS-584.1.peg.3382	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229914.peg.765
CBSS-584.1.peg.3382	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229914.peg.584
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229914.peg.2417
CBSS-630.2.peg.3360	Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock)	fig|6666666.229914.peg.600
CBSS-630.2.peg.3360	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229914.peg.2431
CBSS-630.2.peg.3360	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229914.peg.100
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229914.peg.684
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229914.peg.71
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229914.peg.1083
CBSS-83331.1.peg.3039	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229914.peg.687
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229914.peg.366
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229914.peg.685
CBSS-83333.1.peg.2911	FIG002060: uncharacterized protein YggL	fig|6666666.229914.peg.831
CBSS-83333.1.peg.2911	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229914.peg.830
CBSS-83333.1.peg.876	Cell division protein FtsK	fig|6666666.229914.peg.2285
CBSS-83333.1.peg.876	FIG065221: Holliday junction DNA helicase	fig|6666666.229914.peg.2283
CBSS-83333.1.peg.876	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229914.peg.2284
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.229914.peg.2043
CBSS-83333.1.peg.946	DNA transformation protein TfoX	fig|6666666.229914.peg.246
CBSS-83333.1.peg.946	Inner membrane protein YccF	fig|6666666.229914.peg.2320
CBSS-83333.1.peg.946	Methylglyoxal synthase (EC 4.2.3.3)	fig|6666666.229914.peg.2319
CBSS-83333.1.peg.946	Putative efflux (PET) family inner membrane protein YccS	fig|6666666.229914.peg.2321
CBSS-83333.1.peg.946	UPF0319 protein YccT precursor	fig|6666666.229914.peg.2318
CBSS-87626.3.peg.3639	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-)	fig|6666666.229914.peg.1333
CBSS-87626.3.peg.3639	FIG001590: Putative conserved exported protein precursor	fig|6666666.229914.peg.612
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229914.peg.613
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229914.peg.177
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229914.peg.178
CO2_uptake,_carboxysome	RuBisCO operon transcriptional regulator	fig|6666666.229914.peg.746
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.229914.peg.2009
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.229914.peg.2308
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.229914.peg.2309
CRISPRs	CRISPR-associated helicase Cas3, Yersinia-type	fig|6666666.229914.peg.1433
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229914.peg.1432
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229914.peg.2003
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229914.peg.2005
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229914.peg.2295
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229914.peg.2002
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229914.peg.2293
CRISPRs	CRISPR-associated protein, Cas5d family	fig|6666666.229914.peg.2008
CRISPRs	CRISPR-associated protein, Cas5d family	fig|6666666.229914.peg.2299
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229914.peg.2007
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229914.peg.2297
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229914.peg.2298
CRISPRs	CRISPR-associated protein, Csd2 family	fig|6666666.229914.peg.2006
CRISPRs	CRISPR-associated protein, Csd2 family	fig|6666666.229914.peg.2296
CRISPRs	CRISPR-associated protein, Csy1 family	fig|6666666.229914.peg.1437
CRISPRs	CRISPR-associated protein, Csy2 family	fig|6666666.229914.peg.1436
CRISPRs	CRISPR-associated protein, Csy3 family	fig|6666666.229914.peg.1435
CRISPRs	CRISPR-associated protein, Csy4 family	fig|6666666.229914.peg.1434
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229914.peg.304
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229914.peg.2465
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229914.peg.398
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229914.peg.2376
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229914.peg.2377
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.229914.peg.650
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229914.peg.187
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229914.peg.649
Calvin-Benson_cycle	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229914.peg.99
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229914.peg.987
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.229914.peg.976
Calvin-Benson_cycle	Transketolase, C-terminal section (EC 2.2.1.1)	fig|6666666.229914.peg.2324
Calvin-Benson_cycle	Transketolase, N-terminal section (EC 2.2.1.1)	fig|6666666.229914.peg.2325
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229914.peg.519
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229914.peg.832
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229914.peg.1721
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229914.peg.2366
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229914.peg.2367
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229914.peg.833
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229914.peg.1722
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229914.peg.1906
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229914.peg.2368
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229914.peg.2369
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229914.peg.928
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229914.peg.930
Campylobacter_Iron_Metabolism	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229914.peg.1583
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.229914.peg.599
Campylobacter_Iron_Metabolism	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229914.peg.1582
Capsular_heptose_biosynthesis	D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-)	fig|6666666.229914.peg.1172
Capsular_heptose_biosynthesis	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229914.peg.1514
Capsular_heptose_biosynthesis	Phosphoheptose isomerase 1 (EC 5.3.1.-)	fig|6666666.229914.peg.1092
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229914.peg.2218
Carbon_Starvation	Carbon starvation protein A	fig|6666666.229914.peg.1087
Carbon_Starvation	Carbon storage regulator	fig|6666666.229914.peg.799
Carbon_Starvation	Starvation lipoprotein Slp paralog	fig|6666666.229914.peg.1736
Carbon_Starvation	Stringent starvation protein A	fig|6666666.229914.peg.1777
Carbon_Starvation	Stringent starvation protein B	fig|6666666.229914.peg.1778
Carbon_storage_regulator	Carbon storage regulator	fig|6666666.229914.peg.799
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.229914.peg.1675
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229914.peg.1670
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229914.peg.1670
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229914.peg.1
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229914.peg.75
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229914.peg.1933
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229914.peg.1934
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229914.peg.733
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229914.peg.2
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229914.peg.3
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229914.peg.2464
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229914.peg.2465
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229914.peg.2468
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229914.peg.2466
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229914.peg.2467
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229914.peg.405
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229914.peg.401
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229914.peg.988
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229914.peg.1909
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229914.peg.448
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229914.peg.116
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229914.peg.584
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229914.peg.1941
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229914.peg.741
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229914.peg.742
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229914.peg.749
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229914.peg.1093
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229914.peg.1495
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229914.peg.998
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229914.peg.1560
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.229914.peg.1561
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family	fig|6666666.229914.peg.1545
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229914.peg.1540
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229914.peg.1541
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229914.peg.1552
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229914.peg.1540
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229914.peg.1541
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229914.peg.1552
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229914.peg.1540
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229914.peg.1541
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229914.peg.1552
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)	fig|6666666.229914.peg.2416
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.229914.peg.2415
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229914.peg.1649
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229914.peg.1809
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.229914.peg.1811
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.229914.peg.1812
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229914.peg.1805
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229914.peg.1806
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229914.peg.1651
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229914.peg.1650
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229914.peg.1805
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229914.peg.1806
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229914.peg.1793
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229914.peg.1794
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229914.peg.1701
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229914.peg.524
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229914.peg.884
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229914.peg.1471
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229914.peg.1070
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229914.peg.2109
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229914.peg.1926
Chorismate_Synthesis	Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229914.peg.2109
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.229914.peg.1070
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229914.peg.666
Chorismate_Synthesis	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.229914.peg.2066
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229914.peg.883
Cinnamic_Acid_Degradation	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229914.peg.1446
Citrate_Metabolism,_Transport,_and_Regulation	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25)	fig|6666666.229914.peg.1010
Citrate_Metabolism,_Transport,_and_Regulation	C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)	fig|6666666.229914.peg.1503
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase alpha chain (EC 4.1.3.6)	fig|6666666.229914.peg.1009
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.229914.peg.1008
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	fig|6666666.229914.peg.1007
Citrate_Metabolism,_Transport,_and_Regulation	[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	fig|6666666.229914.peg.1006
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.229914.peg.470
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.229914.peg.472
Cluster_Ytf_and_putative_sugar_transporter	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229914.peg.2376
Cluster_Ytf_and_putative_sugar_transporter	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229914.peg.2377
Cluster_Ytf_and_putative_sugar_transporter	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229914.peg.1511
Cluster_Ytf_and_putative_sugar_transporter	Uncharacterized protein YtfM precursor	fig|6666666.229914.peg.761
Cluster_Ytf_and_putative_sugar_transporter	Uncharacterized protein YtfM precursor	fig|6666666.229914.peg.762
Cluster_Ytf_and_putative_sugar_transporter	Uncharacterized protein YtfN	fig|6666666.229914.peg.763
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229914.peg.797
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229914.peg.798
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229914.peg.1149
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.229914.peg.807
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229914.peg.666
Cluster_containing_Glutathione_synthetase	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229914.peg.1767
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.229914.peg.807
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229914.peg.805
Cluster_containing_Glutathione_synthetase	UPF0301 protein YqgE	fig|6666666.229914.peg.806
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229914.peg.2455
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229914.peg.854
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229914.peg.855
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229914.peg.920
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229914.peg.542
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.229914.peg.663
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.229914.peg.734
Coenzyme_A_Biosynthesis	Pantothenate:Na+ symporter (TC 2.A.21.1.1)	fig|6666666.229914.peg.532
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229914.peg.640
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.229914.peg.870
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.229914.peg.870
Coenzyme_B12_biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229914.peg.756
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229914.peg.1759
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229914.peg.1768
Coenzyme_F420_hydrogenase	Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.229914.peg.2255
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.42
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.236
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.237
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.238
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.1829
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.229914.peg.1262
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspD	fig|6666666.229914.peg.1889
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229914.peg.1701
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229914.peg.524
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229914.peg.884
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229914.peg.1471
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229914.peg.1926
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229914.peg.666
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.229914.peg.2066
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229914.peg.883
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Transcriptional repressor protein TrpR	fig|6666666.229914.peg.1037
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Transcriptional repressor protein TyrR	fig|6666666.229914.peg.1600
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176)	fig|6666666.229914.peg.176
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229914.peg.1358
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229914.peg.1833
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229914.peg.857
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229914.peg.177
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229914.peg.178
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229914.peg.694
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229914.peg.68
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229914.peg.1370
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229914.peg.987
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229914.peg.627
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Similar to C-terminal Zn-finger domain of DNA topoisomerase I	fig|6666666.229914.peg.668
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229914.peg.175
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229914.peg.1735
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229914.peg.128
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229914.peg.1179
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229914.peg.397
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229914.peg.2036
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229914.peg.558
Copper_homeostasis	Copper chaperone	fig|6666666.229914.peg.559
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229914.peg.558
Copper_homeostasis	Cu(I)-responsive transcriptional regulator	fig|6666666.229914.peg.560
Copper_homeostasis	Cytochrome c heme lyase subunit CcmF	fig|6666666.229914.peg.20
Copper_homeostasis	Cytochrome c heme lyase subunit CcmH	fig|6666666.229914.peg.17
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.229914.peg.1003
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.927
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.1004
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.1154
Creatine_and_Creatinine_Degradation	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229914.peg.794
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.229914.peg.1512
Cysteine_Biosynthesis	Cys regulon transcriptional activator CysB	fig|6666666.229914.peg.2106
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.229914.peg.121
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229914.peg.397
Cysteine_Biosynthesis	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.229914.peg.1723
Cysteine_Biosynthesis	Sulfate transporter, CysZ-type	fig|6666666.229914.peg.122
CytR_regulation	Cyclic AMP receptor protein	fig|6666666.229914.peg.874
Cytolethal_distending_toxin_of_Campylobacter_jejuni	Cytolethal distending toxin subunit A	fig|6666666.229914.peg.1620
Cytolethal_distending_toxin_of_Campylobacter_jejuni	Cytolethal distending toxin subunit B	fig|6666666.229914.peg.1621
Cytolethal_distending_toxin_of_Campylobacter_jejuni	Cytolethal distending toxin subunit C	fig|6666666.229914.peg.1622
Cytolethal_distending_toxins	Cytolethal distending toxin subunit A	fig|6666666.229914.peg.1620
Cytolethal_distending_toxins	Cytolethal distending toxin subunit B	fig|6666666.229914.peg.1621
Cytolethal_distending_toxins	Cytolethal distending toxin subunit C	fig|6666666.229914.peg.1622
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229914.peg.91
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229914.peg.95
D-Galacturonate_and_D-Glucuronate_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.229914.peg.87
D-Galacturonate_and_D-Glucuronate_Utilization	D-mannonate oxidoreductase (EC 1.1.1.57)	fig|6666666.229914.peg.92
D-Galacturonate_and_D-Glucuronate_Utilization	Hexuronate utilization operon transcriptional repressor ExuR	fig|6666666.229914.peg.86
D-Galacturonate_and_D-Glucuronate_Utilization	Mannonate dehydratase (EC 4.2.1.8)	fig|6666666.229914.peg.85
D-Galacturonate_and_D-Glucuronate_Utilization	Uronate isomerase (EC 5.3.1.12)	fig|6666666.229914.peg.93
D-Galacturonate_and_D-Glucuronate_Utilization	Uronate isomerase (EC 5.3.1.12)	fig|6666666.229914.peg.94
D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization	Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	fig|6666666.229914.peg.919
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	D-glycerate transporter (predicted)	fig|6666666.229914.peg.450
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.449
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.1612
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Sugar diacid utilization regulator SdaR	fig|6666666.229914.peg.451
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	D-glycerate transporter (predicted)	fig|6666666.229914.peg.450
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.449
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.1612
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Sugar diacid utilization regulator SdaR	fig|6666666.229914.peg.451
D-gluconate_and_ketogluconates_metabolism	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229914.peg.91
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.229914.peg.596
D-gluconate_and_ketogluconates_metabolism	Gluconate utilization system Gnt-I transcriptional repressor	fig|6666666.229914.peg.2238
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.229914.peg.2237
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.229914.peg.1142
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.229914.peg.2236
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.229914.peg.1263
D-ribose_utilization	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229914.peg.99
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229914.peg.738
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229914.peg.1266
D-ribose_utilization	Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)	fig|6666666.229914.peg.1267
D-ribose_utilization	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	fig|6666666.229914.peg.737
D-ribose_utilization	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	fig|6666666.229914.peg.1264
D-ribose_utilization	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	fig|6666666.229914.peg.739
D-ribose_utilization	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	fig|6666666.229914.peg.1265
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229914.peg.125
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229914.peg.318
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229914.peg.319
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.229914.peg.727
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229914.peg.2036
DNA_Repair_Base_Excision	Exodeoxyribonuclease I (EC 3.1.11.1)	fig|6666666.229914.peg.1840
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.229914.peg.865
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229914.peg.2078
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.229914.peg.2458
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229914.peg.1933
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229914.peg.1934
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229914.peg.733
DNA_ligases	DNA ligase (ATP) (EC 6.5.1.1)	fig|6666666.229914.peg.2234
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229914.peg.1921
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229914.peg.1043
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.229914.peg.1045
DNA_processing_cluster	Protein involved in catabolism of external DNA	fig|6666666.229914.peg.876
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229914.peg.1044
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229914.peg.894
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229914.peg.1532
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229914.peg.2134
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.229914.peg.829
DNA_repair,_bacterial	DNA mismatch repair endonuclease MutH	fig|6666666.229914.peg.2405
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229914.peg.2166
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.229914.peg.669
DNA_repair,_bacterial	DNA recombination-dependent growth factor C	fig|6666666.229914.peg.2432
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229914.peg.1487
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229914.peg.2287
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229914.peg.868
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229914.peg.1030
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229914.peg.1501
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.229914.peg.2209
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229914.peg.2388
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229914.peg.1671
DNA_repair,_bacterial	Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	fig|6666666.229914.peg.885
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229914.peg.2404
DNA_repair,_bacterial	RecA protein	fig|6666666.229914.peg.973
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.229914.peg.633
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229914.peg.893
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229914.peg.1734
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229914.peg.1604
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229914.peg.1136
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	fig|6666666.229914.peg.1883
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V beta chain (EC 3.1.11.5)	fig|6666666.229914.peg.1884
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)	fig|6666666.229914.peg.1369
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229914.peg.732
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229914.peg.3
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229914.peg.846
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.229914.peg.973
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229914.peg.1044
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229914.peg.893
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229914.peg.2078
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.229914.peg.973
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.229914.peg.633
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase Rep	fig|6666666.229914.peg.322
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229914.peg.2235
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229914.peg.1136
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.229914.peg.973
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.229914.peg.974
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229914.peg.694
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229914.peg.1
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229914.peg.75
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229914.peg.1933
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229914.peg.1934
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229914.peg.733
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229914.peg.2
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229914.peg.3
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229914.peg.584
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.229914.peg.899
DNA_structural_proteins,_bacterial	Chromosome partition protein MukB	fig|6666666.229914.peg.1842
DNA_structural_proteins,_bacterial	Chromosome partition protein MukE	fig|6666666.229914.peg.1843
DNA_structural_proteins,_bacterial	Chromosome partition protein MukF	fig|6666666.229914.peg.1845
DNA_structural_proteins,_bacterial	DNA-binding protein Fis	fig|6666666.229914.peg.536
DNA_structural_proteins,_bacterial	DNA-binding protein HU-alpha	fig|6666666.229914.peg.770
DNA_structural_proteins,_bacterial	Integration host factor alpha subunit	fig|6666666.229914.peg.1820
DNA_structural_proteins,_bacterial	Integration host factor beta subunit	fig|6666666.229914.peg.1940
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229914.peg.1833
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229914.peg.1043
DNA_topoisomerases,_Type_I,_ATP-independent	Similar to C-terminal Zn-finger domain of DNA topoisomerase I	fig|6666666.229914.peg.668
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229914.peg.1933
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229914.peg.1934
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229914.peg.733
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229914.peg.1525
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229914.peg.1527
DNA_uptake_cluster	Competence protein A	fig|6666666.229914.peg.878
DNA_uptake_cluster	Competence protein B	fig|6666666.229914.peg.879
DNA_uptake_cluster	Competence protein C	fig|6666666.229914.peg.880
DNA_uptake_cluster	Competence protein D	fig|6666666.229914.peg.881
DNA_uptake_cluster	Competence protein E	fig|6666666.229914.peg.882
DNA_uptake_cluster	DNA-binding protein HU-alpha	fig|6666666.229914.peg.770
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229914.peg.877
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229914.peg.1584
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229914.peg.2334
DNA_uptake_cluster	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.229914.peg.767
DNA_uptake_cluster	NfuA Fe-S protein maturation	fig|6666666.229914.peg.301
DNA_uptake_cluster	Protein involved in catabolism of external DNA	fig|6666666.229914.peg.876
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.229914.peg.1831
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229914.peg.837
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229914.peg.1937
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.229914.peg.915
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229914.peg.77
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229914.peg.78
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229914.peg.915
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.229914.peg.1849
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.229914.peg.2264
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229914.peg.2062
Dehydrogenase_complexes	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229914.peg.2114
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.229914.peg.2263
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229914.peg.2115
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose operon repressor, DeoR family	fig|6666666.229914.peg.420
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229914.peg.421
Deoxyribose_and_Deoxynucleoside_Catabolism	Na+ dependent nucleoside transporter NupC	fig|6666666.229914.peg.202
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229914.peg.201
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.229914.peg.1183
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.229914.peg.1263
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.229914.peg.1292
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.229914.peg.2090
Dipeptidases_(EC_3.4.13.-)	Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21)	fig|6666666.229914.peg.1870
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229914.peg.724
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229914.peg.756
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229914.peg.91
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229914.peg.95
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.229914.peg.593
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229914.peg.809
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.229914.peg.2237
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.229914.peg.592
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229914.peg.187
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229914.peg.649
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229914.peg.748
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229914.peg.1159
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229914.peg.1790
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229914.peg.2123
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229914.peg.2124
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229914.peg.154
Exopolysaccharide_Biosynthesis	Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6)	fig|6666666.229914.peg.2212
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59)	fig|6666666.229914.peg.1886
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229914.peg.691
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229914.peg.358
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)	fig|6666666.229914.peg.1023
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.229914.peg.356
Fatty_Acid_Biosynthesis_FASII	4'-phosphopantetheinyl transferase (EC 2.7.8.-)	fig|6666666.229914.peg.2424
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.229914.peg.1497
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229914.peg.1672
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.229914.peg.359
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229914.peg.526
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229914.peg.527
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)	fig|6666666.229914.peg.1427
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.229914.peg.357
Fermentations:_Lactate	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229914.peg.1446
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229914.peg.2123
Fermentations:_Lactate	D-lactate dehydrogenase (EC 1.1.1.28)	fig|6666666.229914.peg.1306
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229914.peg.2124
Fermentations:_Mixed_acid	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229914.peg.1446
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229914.peg.2123
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229914.peg.1058
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229914.peg.1446
Fermentations:_Mixed_acid	D-lactate dehydrogenase (EC 1.1.1.28)	fig|6666666.229914.peg.1306
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.229914.peg.2448
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229914.peg.2124
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229914.peg.2446
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229914.peg.2447
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229914.peg.2459
Fermentations:_Mixed_acid	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	fig|6666666.229914.peg.2445
Fermentations:_Mixed_acid	Sugar/maltose fermentation stimulation protein homolog	fig|6666666.229914.peg.2146
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229914.peg.132
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229914.peg.1083
Flavodoxin	Flavodoxin 1	fig|6666666.229914.peg.1931
Flavodoxin	Flavodoxin 2	fig|6666666.229914.peg.1117
Flavodoxin	Flavodoxin 2	fig|6666666.229914.peg.1118
Flavodoxin	Flavodoxin 2	fig|6666666.229914.peg.1747
Flavodoxin	Flavoprotein MioC	fig|6666666.229914.peg.400
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.229914.peg.1117
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.229914.peg.1118
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.229914.peg.1747
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.229914.peg.2126
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229914.peg.610
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229914.peg.1649
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.229914.peg.341
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229914.peg.1673
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.229914.peg.48
Folate_Biosynthesis	Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB)	fig|6666666.229914.peg.1350
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.229914.peg.2167
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229914.peg.1673
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229914.peg.2191
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229914.peg.1651
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229914.peg.1650
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.229914.peg.1271
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.229914.peg.2126
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229914.peg.1909
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.229914.peg.48
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.229914.peg.2167
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229914.peg.2191
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229914.peg.448
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229914.peg.1495
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229914.peg.2257
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229914.peg.2258
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229914.peg.2259
Formate_dehydrogenase	Formate dehydrogenase N alpha subunit (EC 1.2.1.2)	fig|6666666.229914.peg.2240
Formate_dehydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.229914.peg.2241
Formate_hydrogenase	Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)	fig|6666666.229914.peg.2242
Formate_hydrogenase	Formate dehydrogenase N alpha subunit (EC 1.2.1.2)	fig|6666666.229914.peg.2240
Formate_hydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.229914.peg.2241
Formate_hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.229914.peg.2239
Formate_hydrogenase	Formate hydrogenlyase subunit 3	fig|6666666.229914.peg.2246
Formate_hydrogenase	Formate hydrogenlyase subunit 5	fig|6666666.229914.peg.2251
Formate_hydrogenase	Formate hydrogenlyase subunit 6	fig|6666666.229914.peg.2252
Formate_hydrogenase	Formate hydrogenlyase subunit 7	fig|6666666.229914.peg.2253
Formate_hydrogenase	Formate hydrogenlyase transcriptional activator	fig|6666666.229914.peg.2254
Formate_hydrogenase	Hydrogenase-4 component E (EC 1.-.-.-)	fig|6666666.229914.peg.2249
Formate_hydrogenase	formate dehydrogenase formation protein FdhE	fig|6666666.229914.peg.2024
Fructose_utilization	1-phosphofructokinase (EC 2.7.1.56)	fig|6666666.229914.peg.1123
Fructose_utilization	Fructose repressor FruR, LacI family	fig|6666666.229914.peg.2099
Fructose_utilization	Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69)	fig|6666666.229914.peg.1124
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.229914.peg.1124
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.229914.peg.1122
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.229914.peg.1122
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229914.peg.1636
Fructose_utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229914.peg.1635
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.229914.peg.977
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229914.peg.171
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HybG	fig|6666666.229914.peg.1803
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.229914.peg.2069
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.229914.peg.2068
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.229914.peg.2244
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229914.peg.2070
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229914.peg.1408
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229914.peg.1197
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.42
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.236
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.237
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.238
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.1829
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229914.peg.227
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate--ammonia ligase (EC 6.3.1.1)	fig|6666666.229914.peg.161
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229914.peg.180
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229914.peg.1464
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229914.peg.2407
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.229914.peg.66
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system	fig|6666666.229914.peg.2286
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229914.peg.1197
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229914.peg.2407
Glutaredoxin_3_containing_cluster	FIG136845: Rhodanese-related sulfurtransferase	fig|6666666.229914.peg.394
Glutaredoxin_3_containing_cluster	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229914.peg.396
Glutaredoxin_3_containing_cluster	Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state)	fig|6666666.229914.peg.395
Glutaredoxins	Cell wall endopeptidase, family M23/M37	fig|6666666.229914.peg.2031
Glutaredoxins	Cell wall endopeptidase, family M23/M37	fig|6666666.229914.peg.2032
Glutaredoxins	Glutaredoxin 1	fig|6666666.229914.peg.1409
Glutaredoxins	Glutaredoxin 2	fig|6666666.229914.peg.2354
Glutaredoxins	Glutaredoxin-related protein	fig|6666666.229914.peg.310
Glutaredoxins	Glutaredoxin-related protein	fig|6666666.229914.peg.1568
Glutaredoxins	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229914.peg.1161
Glutathione-dependent_pathway_of_formaldehyde_detoxification	S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284)	fig|6666666.229914.peg.921
Glutathione-dependent_pathway_of_formaldehyde_detoxification	S-formylglutathione hydrolase (EC 3.1.2.12)	fig|6666666.229914.peg.922
Glutathione-dependent_pathway_of_formaldehyde_detoxification	S-formylglutathione hydrolase (EC 3.1.2.12)	fig|6666666.229914.peg.923
Glutathione-regulated_potassium-efflux_system_and_associated_functions	Glutathione-regulated potassium-efflux system ATP-binding protein	fig|6666666.229914.peg.972
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229914.peg.2018
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3)	fig|6666666.229914.peg.549
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229914.peg.1767
Glutathione:_Non-redox_reactions	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229914.peg.1542
Glutathione:_Non-redox_reactions	Glutathione S-transferase (EC 2.5.1.18)	fig|6666666.229914.peg.1524
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229914.peg.1543
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229914.peg.1339
Glutathione:_Redox_cycle	Glutaredoxin 1	fig|6666666.229914.peg.1409
Glutathione:_Redox_cycle	Glutaredoxin 2	fig|6666666.229914.peg.2354
Glutathione:_Redox_cycle	Glutathione reductase (EC 1.8.1.7)	fig|6666666.229914.peg.875
Glutathionylspermidine_and_Trypanothione	Glutathionylspermidine amidohydrolase (EC 3.5.1.78)	fig|6666666.229914.peg.258
Glutathionylspermidine_and_Trypanothione	Glutathionylspermidine synthase (EC 6.3.1.8)	fig|6666666.229914.peg.258
Glycerate_metabolism	D-glycerate transporter (predicted)	fig|6666666.229914.peg.450
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.449
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.1612
Glycerate_metabolism	Hydroxypyruvate isomerase (EC 5.3.1.22)	fig|6666666.229914.peg.1143
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.229914.peg.1652
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229914.peg.1790
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229914.peg.697
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229914.peg.2442
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229914.peg.359
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein (ACP1)	fig|6666666.229914.peg.284
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein (ACP2)	fig|6666666.229914.peg.283
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY	fig|6666666.229914.peg.49
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229914.peg.1058
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229914.peg.1446
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229914.peg.696
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229914.peg.2352
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8)	fig|6666666.229914.peg.645
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.229914.peg.1675
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Diacylglycerol kinase (EC 2.7.1.107)	fig|6666666.229914.peg.849
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.449
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.1612
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)	fig|6666666.229914.peg.634
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229914.peg.1518
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229914.peg.396
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphate:acyl-ACP acyltransferase PlsX	fig|6666666.229914.peg.355
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229914.peg.686
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229914.peg.698
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylglycerophosphatase A (EC 3.1.3.27)	fig|6666666.229914.peg.1710
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylglycerophosphatase B (EC 3.1.3.27)	fig|6666666.229914.peg.2203
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylserine decarboxylase (EC 4.1.1.65)	fig|6666666.229914.peg.347
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229914.peg.1376
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229914.peg.98
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.449
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.1612
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229914.peg.65
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229914.peg.65
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229914.peg.1473
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229914.peg.114
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229914.peg.1376
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.229914.peg.64
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229914.peg.2280
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229914.peg.1307
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229914.peg.2195
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229914.peg.1854
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229914.peg.1855
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229914.peg.2119
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229914.peg.1852
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229914.peg.1853
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229914.peg.1850
Glycogen_metabolism	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229914.peg.1851
Glycogen_metabolism	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229914.peg.2118
Glycogen_metabolism_cluster	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229914.peg.1854
Glycogen_metabolism_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229914.peg.1855
Glycogen_metabolism_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229914.peg.2119
Glycogen_metabolism_cluster	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229914.peg.1852
Glycogen_metabolism_cluster	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229914.peg.1853
Glycogen_metabolism_cluster	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229914.peg.1850
Glycogen_metabolism_cluster	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229914.peg.1851
Glycolate,_glyoxylate_interconversions	Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD	fig|6666666.229914.peg.1566
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.229914.peg.1652
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229914.peg.986
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229914.peg.1575
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229914.peg.2454
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229914.peg.809
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229914.peg.398
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229914.peg.2376
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229914.peg.2377
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.229914.peg.650
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229914.peg.1705
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229914.peg.187
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229914.peg.649
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229914.peg.748
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229914.peg.1159
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229914.peg.1790
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229914.peg.519
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229914.peg.2454
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.229914.peg.809
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229914.peg.398
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229914.peg.2376
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229914.peg.2377
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229914.peg.1705
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229914.peg.649
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229914.peg.748
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229914.peg.1159
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229914.peg.1790
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229914.peg.519
Glycyl-tRNA_synthetase	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229914.peg.311
Glycyl-tRNA_synthetase	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229914.peg.305
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229914.peg.846
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229914.peg.2463
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229914.peg.311
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229914.peg.305
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.927
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.1004
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.1154
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229914.peg.1097
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229914.peg.2046
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229914.peg.2347
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229914.peg.2346
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229914.peg.224
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229914.peg.225
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229914.peg.1027
HPr_catabolite_repression_system	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229914.peg.1635
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229914.peg.2347
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229914.peg.2346
Heat_shock_dnaK_gene_cluster_extended	FIG001341: Probable Fe(2+)-trafficking protein YggX	fig|6666666.229914.peg.828
Heat_shock_dnaK_gene_cluster_extended	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229914.peg.1767
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229914.peg.1027
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229914.peg.102
Heat_shock_dnaK_gene_cluster_extended	RNA polymerase sigma factor RpoH	fig|6666666.229914.peg.247
Heat_shock_dnaK_gene_cluster_extended	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229914.peg.100
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.229914.peg.838
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229914.peg.805
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.229914.peg.534
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229914.peg.584
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229914.peg.2460
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229914.peg.1517
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229914.peg.1324
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229914.peg.1325
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229914.peg.928
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229914.peg.930
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229914.peg.675
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229914.peg.1025
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229914.peg.1026
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229914.peg.1340
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229914.peg.1944
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229914.peg.1996
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Paraquat-inducible protein A	fig|6666666.229914.peg.2271
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Paraquat-inducible protein B	fig|6666666.229914.peg.2272
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Paraquat-inducible protein B	fig|6666666.229914.peg.2273
Heme_and_Siroheme_Biosynthesis	Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	fig|6666666.229914.peg.517
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.229914.peg.1564
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.229914.peg.1589
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.229914.peg.1544
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229914.peg.1200
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.229914.peg.758
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.229914.peg.473
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)	fig|6666666.229914.peg.502
Heme_and_Siroheme_Biosynthesis	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229914.peg.100
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.229914.peg.768
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229914.peg.756
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.229914.peg.757
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229914.peg.930
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229914.peg.675
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229914.peg.1025
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229914.peg.1026
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229914.peg.1340
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229914.peg.1944
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229914.peg.1996
Hexose_Phosphate_Uptake_System	Hexose phosphate uptake regulatory protein UhpC	fig|6666666.229914.peg.193
Hfl_operon	GTP-binding protein HflX	fig|6666666.229914.peg.1601
Hfl_operon	HflC protein	fig|6666666.229914.peg.2427
Hfl_operon	HflK protein	fig|6666666.229914.peg.2425
Hfl_operon	HflK protein	fig|6666666.229914.peg.2426
Hfl_operon	RNA-binding protein Hfq	fig|6666666.229914.peg.1602
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.229914.peg.992
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Cof protein, HD superfamily hydrolase	fig|6666666.229914.peg.654
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229914.peg.871
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229914.peg.102
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleotidase YfbR, HD superfamily	fig|6666666.229914.peg.2056
Hydrogenases	Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.229914.peg.2255
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229914.peg.501
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229914.peg.175
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229914.peg.2258
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229914.peg.2259
Inositol_catabolism	5-deoxy-glucuronate isomerase (EC 5.3.1.-)	fig|6666666.229914.peg.2091
Inositol_catabolism	5-keto-2-deoxygluconokinase (EC 2.7.1.92)	fig|6666666.229914.peg.1387
Inositol_catabolism	Epi-inositol hydrolase (EC 3.7.1.-)	fig|6666666.229914.peg.1386
Inositol_catabolism	Inositol transport system ATP-binding protein	fig|6666666.229914.peg.1443
Inositol_catabolism	Inositol transport system ATP-binding protein	fig|6666666.229914.peg.1444
Inositol_catabolism	Inositol transport system permease protein	fig|6666666.229914.peg.1445
Inositol_catabolism	Inositol transport system sugar-binding protein	fig|6666666.229914.peg.1441
Inositol_catabolism	Inositol transport system sugar-binding protein	fig|6666666.229914.peg.1442
Inositol_catabolism	Inosose dehydratase (EC 4.2.1.44)	fig|6666666.229914.peg.1385
Inositol_catabolism	Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)	fig|6666666.229914.peg.1439
Inositol_catabolism	Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)	fig|6666666.229914.peg.1384
Inositol_catabolism	Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18)	fig|6666666.229914.peg.1440
Inositol_catabolism	Predicted transcriptional regulator of the myo-inositol catabolic operon	fig|6666666.229914.peg.1388
Inositol_catabolism	uncharacterized domain	fig|6666666.229914.peg.1387
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229914.peg.1191
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229914.peg.1833
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229914.peg.772
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229914.peg.1186
Inteins	Translation initiation factor 2	fig|6666666.229914.peg.1959
Inteins	Translation initiation factor 2	fig|6666666.229914.peg.2152
Intracellular_septation_in_Enterobacteria	Acyl-CoA thioesterase YciA, involved in membrane biogenesis	fig|6666666.229914.peg.1034
Intracellular_septation_in_Enterobacteria	Intracellular septation protein IspA	fig|6666666.229914.peg.1033
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, ATP-binding protein	fig|6666666.229914.peg.834
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, ATP-binding protein	fig|6666666.229914.peg.1907
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229914.peg.832
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229914.peg.1721
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229914.peg.2366
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229914.peg.2367
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229914.peg.833
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229914.peg.1722
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229914.peg.1906
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229914.peg.2368
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229914.peg.2369
Iron_transport_system_including_ABC_transporter	Cytochrome C553 (soluble cytochrome f)	fig|6666666.229914.peg.1576
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, ATP-binding subunit	fig|6666666.229914.peg.1578
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, permease protein 2	fig|6666666.229914.peg.1579
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, substrate binding protein	fig|6666666.229914.peg.1581
Iron_transport_system_including_ABC_transporter	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229914.peg.1583
Iron_transport_system_including_ABC_transporter	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229914.peg.1582
Iron_transport_system_including_ABC_transporter	Possible periplasmic thiredoxin	fig|6666666.229914.peg.1577
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229914.peg.2048
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229914.peg.1670
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229914.peg.684
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229914.peg.1669
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229914.peg.71
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229914.peg.990
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229914.peg.989
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229914.peg.1480
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229914.peg.105
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229914.peg.154
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229914.peg.1670
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229914.peg.685
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229914.peg.1670
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229914.peg.1670
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229914.peg.1670
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229914.peg.1670
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229914.peg.1331
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229914.peg.1670
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229914.peg.685
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.229914.peg.2174
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.229914.peg.1813
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.229914.peg.641
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.229914.peg.2133
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.229914.peg.692
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.229914.peg.1814
KDO2-Lipid_A_biosynthesis	DNA internalization-related competence protein ComEC/Rec2	fig|6666666.229914.peg.2129
KDO2-Lipid_A_biosynthesis	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229914.peg.904
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-)	fig|6666666.229914.peg.1923
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	fig|6666666.229914.peg.1749
KDO2-Lipid_A_biosynthesis	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25)	fig|6666666.229914.peg.2130
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.229914.peg.693
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.229914.peg.2391
KDO2-Lipid_A_biosynthesis	LptA, protein essential for LPS transport across the periplasm	fig|6666666.229914.peg.2392
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.229914.peg.2131
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.229914.peg.2441
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108)	fig|6666666.229914.peg.1071
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.229914.peg.690
KDO2-Lipid_A_biosynthesis_cluster_2	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.229914.peg.2133
KDO2-Lipid_A_biosynthesis_cluster_2	DNA internalization-related competence protein ComEC/Rec2	fig|6666666.229914.peg.2129
KDO2-Lipid_A_biosynthesis_cluster_2	FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster	fig|6666666.229914.peg.2132
KDO2-Lipid_A_biosynthesis_cluster_2	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25)	fig|6666666.229914.peg.2130
KDO2-Lipid_A_biosynthesis_cluster_2	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.229914.peg.2131
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229914.peg.616
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229914.peg.615
L-Arabinose_utilization	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)	fig|6666666.229914.peg.1401
L-ascorbate_utilization_(and_related_gene_clusters)	3-keto-L-gulonate 6-phosphate decarboxylase	fig|6666666.229914.peg.1395
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate utilization transcriptional regulator UlaR, HTH-type	fig|6666666.229914.peg.1399
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	fig|6666666.229914.peg.1396
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate-specific PTS system, EIIC component	fig|6666666.229914.peg.1397
L-ascorbate_utilization_(and_related_gene_clusters)	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)	fig|6666666.229914.peg.1401
L-ascorbate_utilization_(and_related_gene_clusters)	L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-)	fig|6666666.229914.peg.1400
L-ascorbate_utilization_(and_related_gene_clusters)	L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-)	fig|6666666.229914.peg.740
L-ascorbate_utilization_(and_related_gene_clusters)	Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G)	fig|6666666.229914.peg.1398
L-rhamnose_utilization	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229914.peg.1477
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.229914.peg.170
LOS_core_oligosaccharide_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.229914.peg.641
LOS_core_oligosaccharide_biosynthesis	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)	fig|6666666.229914.peg.261
LOS_core_oligosaccharide_biosynthesis	ADP-heptose synthase (EC 2.7.-.-)	fig|6666666.229914.peg.1750
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229914.peg.228
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229914.peg.259
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229914.peg.638
LOS_core_oligosaccharide_biosynthesis	Beta-1,4-galactosyltransferase	fig|6666666.229914.peg.862
LOS_core_oligosaccharide_biosynthesis	D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-)	fig|6666666.229914.peg.1172
LOS_core_oligosaccharide_biosynthesis	D-glycero-beta-D-manno-heptose 7-phosphate kinase	fig|6666666.229914.peg.1750
LOS_core_oligosaccharide_biosynthesis	O-antigen ligase	fig|6666666.229914.peg.652
LOS_core_oligosaccharide_biosynthesis	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229914.peg.1514
LOS_core_oligosaccharide_biosynthesis	Phosphoheptose isomerase 1 (EC 5.3.1.-)	fig|6666666.229914.peg.1092
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229914.peg.567
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229914.peg.570
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229914.peg.569
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229914.peg.566
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229914.peg.572
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229914.peg.571
Lactate_utilization	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229914.peg.1477
Lactate_utilization	L-lactate permease	fig|6666666.229914.peg.1476
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229914.peg.1492
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229914.peg.1013
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229914.peg.1408
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229914.peg.1014
Lactose_and_Galactose_Uptake_and_Utilization	Galactose operon repressor, GalR-LacI family of transcriptional regulators	fig|6666666.229914.peg.1016
Lactose_and_Galactose_Uptake_and_Utilization	Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	fig|6666666.229914.peg.1015
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229914.peg.1018
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229914.peg.1019
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)	fig|6666666.229914.peg.1017
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	fig|6666666.229914.peg.1020
Lactose_and_Galactose_Uptake_and_Utilization	Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)	fig|6666666.229914.peg.1665
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229914.peg.1492
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229914.peg.1408
Lactose_utilization	Galactoside O-acetyltransferase (EC 2.3.1.18)	fig|6666666.229914.peg.326
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229914.peg.2048
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229914.peg.2048
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229914.peg.2113
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229914.peg.372
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229914.peg.373
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229914.peg.113
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.229914.peg.371
Lipoic_acid_metabolism	Proposed lipoate regulatory protein YbeD	fig|6666666.229914.peg.370
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.229914.peg.372
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.229914.peg.373
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.229914.peg.371
Lipoic_acid_synthesis_cluster	Proposed lipoate regulatory protein YbeD	fig|6666666.229914.peg.370
Lipoic_acid_synthesis_cluster	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229914.peg.2311
Lipopolysaccharide_assembly	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229914.peg.904
Lipopolysaccharide_assembly	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.229914.peg.2391
Lipopolysaccharide_assembly	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229914.peg.1699
Lipopolysaccharide_assembly	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229914.peg.1698
Lipopolysaccharide_assembly	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229914.peg.1700
Lipopolysaccharide_assembly	LptA, protein essential for LPS transport across the periplasm	fig|6666666.229914.peg.2392
Lipopolysaccharide_assembly	Outer membrane lipoprotein LolB	fig|6666666.229914.peg.1481
Lipopolysaccharide_assembly	Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex	fig|6666666.229914.peg.789
Lipopolysaccharide_assembly	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229914.peg.2284
Lipopolysaccharide_assembly	Outer membrane protein H precursor	fig|6666666.229914.peg.689
Lipopolysaccharide_assembly	Outer membrane protein Imp, required for envelope biogenesis	fig|6666666.229914.peg.726
Lipopolysaccharide_assembly	Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL)	fig|6666666.229914.peg.2414
Lipopolysaccharide_assembly	Outer membrane protein assembly factor YaeT precursor	fig|6666666.229914.peg.688
Lipopolysaccharide_assembly	Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB)	fig|6666666.229914.peg.609
Lipopolysaccharide_assembly	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229914.peg.914
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, ATP-binding protein YrbF	fig|6666666.229914.peg.2395
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, auxiliary component YrbC	fig|6666666.229914.peg.2398
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, periplasmic component YrbD	fig|6666666.229914.peg.2397
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, permease component YrbE	fig|6666666.229914.peg.2396
Lipopolysaccharide_assembly	Uncharacterized protein YrbK clustered with lipopolysaccharide transporters	fig|6666666.229914.peg.2393
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229914.peg.1003
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229914.peg.106
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229914.peg.1270
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229914.peg.1699
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229914.peg.1698
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229914.peg.1700
Lipoprotein_sorting_system	Outer membrane lipoprotein LolB	fig|6666666.229914.peg.1481
Lipoprotein_sorting_system	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229914.peg.2284
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229914.peg.691
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.229914.peg.692
Llipid_A_biosynthesis_cluster	FIG053235: Diacylglucosamine hydrolase like	fig|6666666.229914.peg.1332
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.229914.peg.693
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.229914.peg.689
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.229914.peg.688
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.229914.peg.2441
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.229914.peg.690
LysR-family_proteins_in_Escherichia_coli	Cys regulon transcriptional activator CysB	fig|6666666.229914.peg.2106
LysR-family_proteins_in_Escherichia_coli	Glycine cleavage system transcriptional activator GcvA	fig|6666666.229914.peg.2050
LysR-family_proteins_in_Escherichia_coli	Glycine cleavage system transcriptional activator GcvA	fig|6666666.229914.peg.2051
LysR-family_proteins_in_Escherichia_coli	HTH-type transcriptional regulator IlvY	fig|6666666.229914.peg.664
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.229914.peg.389
LysR-family_proteins_in_Escherichia_coli	Transcriptional activator MetR	fig|6666666.229914.peg.2000
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	HTH-type transcriptional regulator IlvY	fig|6666666.229914.peg.664
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.229914.peg.389
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Transcriptional activator MetR	fig|6666666.229914.peg.2000
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.229914.peg.2105
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.229914.peg.1712
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.229914.peg.2413
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229914.peg.298
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229914.peg.2180
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.229914.peg.2420
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229914.peg.729
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229914.peg.291
Lysine_Biosynthesis_DAP_Pathway	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229914.peg.1066
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.229914.peg.2105
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.229914.peg.1712
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.229914.peg.2413
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229914.peg.298
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229914.peg.2180
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.229914.peg.2420
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229914.peg.729
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229914.peg.291
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229914.peg.1066
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229914.peg.154
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229914.peg.131
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229914.peg.132
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229914.peg.130
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229914.peg.128
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.927
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.1004
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.1154
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229914.peg.599
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229914.peg.981
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229914.peg.1855
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229914.peg.2119
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229914.peg.1013
Maltose_and_Maltodextrin_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.229914.peg.87
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229914.peg.1850
Maltose_and_Maltodextrin_Utilization	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229914.peg.2118
Maltose_and_Maltodextrin_Utilization	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)	fig|6666666.229914.peg.1730
Maltose_and_Maltodextrin_Utilization	Maltose operon periplasmic protein MalM	fig|6666666.229914.peg.1731
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.229914.peg.1726
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.229914.peg.1725
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229914.peg.1728
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)	fig|6666666.229914.peg.1729
Maltose_and_Maltodextrin_Utilization	Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon	fig|6666666.229914.peg.1780
Maltose_and_Maltodextrin_Utilization	Periplasmic alpha-amylase (EC 3.2.1.1)	fig|6666666.229914.peg.1724
Maltose_and_Maltodextrin_Utilization	Transcriptional activator of maltose regulon, MalT	fig|6666666.229914.peg.2117
Maltose_utilization_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229914.peg.1855
Maltose_utilization_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229914.peg.2119
Maltose_utilization_cluster	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229914.peg.2118
Maltose_utilization_cluster	Transcriptional activator of maltose regulon, MalT	fig|6666666.229914.peg.2117
Mannitol_Utilization	Mannitol operon repressor	fig|6666666.229914.peg.1383
Mannitol_Utilization	Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)	fig|6666666.229914.peg.1382
Mannitol_Utilization	PTS system, mannitol-specific IIA component (EC 2.7.1.69)	fig|6666666.229914.peg.1381
Mannitol_Utilization	PTS system, mannitol-specific IIB component (EC 2.7.1.69)	fig|6666666.229914.peg.1381
Mannitol_Utilization	PTS system, mannitol-specific IIC component (EC 2.7.1.69)	fig|6666666.229914.peg.1381
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229914.peg.1636
Mannitol_Utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229914.peg.1635
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.229914.peg.1538
Mannose_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.229914.peg.207
Mannose_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.229914.peg.231
Mannose_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229914.peg.207
Mannose_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229914.peg.231
Mannose_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229914.peg.206
Mannose_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229914.peg.230
Mannose_Metabolism	PTS system, mannose-specific IID component (EC 2.7.1.69)	fig|6666666.229914.peg.205
Mannose_Metabolism	PTS system, mannose-specific IID component (EC 2.7.1.69)	fig|6666666.229914.peg.229
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.229914.peg.800
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229914.peg.4
Menaquinone_and_Phylloquinone_Biosynthesis	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.229914.peg.442
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.229914.peg.40
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	fig|6666666.229914.peg.39
Menaquinone_and_Phylloquinone_Biosynthesis	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.229914.peg.41
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.229914.peg.520
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229914.peg.523
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.229914.peg.1928
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229914.peg.4
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.229914.peg.442
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.229914.peg.40
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	fig|6666666.229914.peg.39
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.229914.peg.41
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.229914.peg.520
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229914.peg.523
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.229914.peg.1928
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229914.peg.369
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229914.peg.2190
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229914.peg.1082
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229914.peg.1081
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229914.peg.1590
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229914.peg.2065
Methionine_Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.229914.peg.2001
Methionine_Biosynthesis	Cystathionine beta-lyase (EC 4.4.1.8)	fig|6666666.229914.peg.2351
Methionine_Biosynthesis	Cystathionine gamma-synthase (EC 2.5.1.48)	fig|6666666.229914.peg.1304
Methionine_Biosynthesis	Cystathionine gamma-synthase (EC 2.5.1.48)	fig|6666666.229914.peg.1305
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.229914.peg.121
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.229914.peg.2101
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.229914.peg.2420
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229914.peg.2421
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.229914.peg.1171
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.229914.peg.1379
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.229914.peg.1170
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.229914.peg.1168
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.229914.peg.1169
Methionine_Biosynthesis	Methionine repressor MetJ	fig|6666666.229914.peg.802
Methionine_Biosynthesis	Methionine repressor MetJ	fig|6666666.229914.peg.803
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229914.peg.2076
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229914.peg.37
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229914.peg.328
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229914.peg.397
Methionine_Biosynthesis	Transcriptional activator MetR	fig|6666666.229914.peg.2000
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229914.peg.1171
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229914.peg.1379
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.229914.peg.1170
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.229914.peg.1168
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.229914.peg.1169
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229914.peg.2115
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229914.peg.2076
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229914.peg.37
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229914.peg.328
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229914.peg.2076
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229914.peg.1543
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229914.peg.1339
Methylglyoxal_Metabolism	Methylglyoxal synthase (EC 4.2.3.3)	fig|6666666.229914.peg.2319
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229914.peg.169
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229914.peg.1335
Molybdenum_cofactor_biosynthesis	DNA-binding domain of ModE	fig|6666666.229914.peg.2058
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229914.peg.2191
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229914.peg.2204
Molybdenum_cofactor_biosynthesis	Molybdate-binding domain of ModE	fig|6666666.229914.peg.1765
Molybdenum_cofactor_biosynthesis	Molybdate-binding domain of ModE	fig|6666666.229914.peg.2058
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.229914.peg.2059
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.229914.peg.2342
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.229914.peg.1773
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.229914.peg.1774
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.229914.peg.1775
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.229914.peg.1776
Molybdenum_cofactor_biosynthesis	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	fig|6666666.229914.peg.2061
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.229914.peg.2060
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.229914.peg.2341
Molybdenum_cofactor_biosynthesis	Molybdenum transport system protein ModD	fig|6666666.229914.peg.2338
Molybdenum_cofactor_biosynthesis	Molybdenum transport system protein ModD	fig|6666666.229914.peg.2339
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis molybdochelatase MogA	fig|6666666.229914.peg.699
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.229914.peg.2192
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeB	fig|6666666.229914.peg.2193
Molybdenum_cofactor_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.229914.peg.1126
Molybdenum_cofactor_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobB	fig|6666666.229914.peg.722
Muconate_lactonizing_enzyme_family	L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase	fig|6666666.229914.peg.179
Muconate_lactonizing_enzyme_family	L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase	fig|6666666.229914.peg.503
Muconate_lactonizing_enzyme_family	L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase	fig|6666666.229914.peg.978
Muconate_lactonizing_enzyme_family	L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase	fig|6666666.229914.peg.1173
Muconate_lactonizing_enzyme_family	L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase	fig|6666666.229914.peg.1591
Muconate_lactonizing_enzyme_family	L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase	fig|6666666.229914.peg.2156
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229914.peg.523
MukBEF_Chromosome_Condensation	Chromosome partition protein MukB	fig|6666666.229914.peg.1842
MukBEF_Chromosome_Condensation	Chromosome partition protein MukE	fig|6666666.229914.peg.1843
MukBEF_Chromosome_Condensation	Chromosome partition protein MukF	fig|6666666.229914.peg.1845
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Inner membrane component of tripartite multidrug resistance system	fig|6666666.229914.peg.1422
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Membrane fusion component of tripartite multidrug resistance system	fig|6666666.229914.peg.1423
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Membrane fusion component of tripartite multidrug resistance system	fig|6666666.229914.peg.1424
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Outer membrane component of tripartite multidrug resistance system	fig|6666666.229914.peg.1824
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.229914.peg.853
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.229914.peg.892
Multidrug_Resistance_Efflux_Pumps	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)	fig|6666666.229914.peg.1683
Multidrug_Resistance_Efflux_Pumps	Macrolide-specific efflux protein MacA	fig|6666666.229914.peg.1684
Multidrug_Resistance_Efflux_Pumps	Membrane fusion protein of RND family multidrug efflux pump	fig|6666666.229914.peg.889
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229914.peg.2184
Multidrug_Resistance_Efflux_Pumps	RND efflux system, outer membrane lipoprotein CmeC	fig|6666666.229914.peg.1682
Multidrug_efflux_pump_in_Campylobacter_jejuni_(CmeABC_operon)	RND efflux system, outer membrane lipoprotein CmeC	fig|6666666.229914.peg.1682
Murein_Hydrolases	Beta N-acetyl-glucosaminidase (EC 3.2.1.52)	fig|6666666.229914.peg.2451
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229914.peg.369
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229914.peg.2190
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-)	fig|6666666.229914.peg.2380
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)	fig|6666666.229914.peg.2222
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-)	fig|6666666.229914.peg.827
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229914.peg.1605
Murein_Hydrolases	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	fig|6666666.229914.peg.1036
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229914.peg.565
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229914.peg.564
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229914.peg.661
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229914.peg.662
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229914.peg.660
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229914.peg.659
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229914.peg.658
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229914.peg.735
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229914.peg.736
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229914.peg.2454
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229914.peg.998
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229914.peg.1492
NADPH:quinone_oxidoreductase_2	NADPH:quinone oxidoreductase 2	fig|6666666.229914.peg.402
NADPH:quinone_oxidoreductase_2	NADPH:quinone oxidoreductase 2	fig|6666666.229914.peg.403
NADPH:quinone_oxidoreductase_2	Redox-sensing transcriptional regulator QorR	fig|6666666.229914.peg.404
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229914.peg.1064
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229914.peg.1029
NAD_and_NADP_cofactor_biosynthesis_global	NMN 5'-nucleotidase, extracellular (EC 3.1.3.5)	fig|6666666.229914.peg.2383
NAD_and_NADP_cofactor_biosynthesis_global	NMN phosphatase (EC 3.1.3.5)	fig|6666666.229914.peg.936
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamide phosphoribosyltransferase (EC 2.4.2.12)	fig|6666666.229914.peg.2418
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1)	fig|6666666.229914.peg.494
NAD_and_NADP_cofactor_biosynthesis_global	Ribosyl nicotinamide transporter, PnuC-like	fig|6666666.229914.peg.511
NAD_and_NADP_cofactor_biosynthesis_global	Ribosylnicotinamide kinase (EC 2.7.1.22)	fig|6666666.229914.peg.494
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.229914.peg.2042
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229914.peg.2041
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.229914.peg.2040
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229914.peg.2039
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.229914.peg.2037
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.229914.peg.2038
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229914.peg.821
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229914.peg.820
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229914.peg.819
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229914.peg.818
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229914.peg.817
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.229914.peg.816
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Probable exported or periplasmic protein in ApbE locus	fig|6666666.229914.peg.813
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	fig|6666666.229914.peg.1800
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.229914.peg.1799
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)	fig|6666666.229914.peg.1801
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HybG	fig|6666666.229914.peg.1803
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.229914.peg.2069
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.229914.peg.2068
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.229914.peg.2244
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HybF	fig|6666666.229914.peg.1491
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229914.peg.2070
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229914.peg.53
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229914.peg.684
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229914.peg.1669
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229914.peg.71
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229914.peg.990
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229914.peg.989
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229914.peg.1480
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229914.peg.105
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229914.peg.795
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP compounds hydrolase NudE (EC 3.6.1.-)	fig|6666666.229914.peg.586
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229914.peg.1064
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229914.peg.1268
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229914.peg.871
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.229914.peg.902
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.229914.peg.767
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229914.peg.2154
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229914.peg.2151
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229914.peg.2153
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229914.peg.1959
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229914.peg.2152
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229914.peg.2065
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229914.peg.610
One-carbon_metabolism_by_tetrahydropterines	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.229914.peg.1911
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229914.peg.223
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229914.peg.223
Orphan_regulatory_proteins	Copper sensory histidine kinase CpxA	fig|6666666.229914.peg.787
Orphan_regulatory_proteins	Copper-sensing two-component system response regulator CpxR	fig|6666666.229914.peg.788
Orphan_regulatory_proteins	DNA transformation protein TfoX	fig|6666666.229914.peg.246
Orphan_regulatory_proteins	Glycine cleavage system transcriptional activator GcvA	fig|6666666.229914.peg.2050
Orphan_regulatory_proteins	Glycine cleavage system transcriptional activator GcvA	fig|6666666.229914.peg.2051
Orphan_regulatory_proteins	Sensory histidine kinase QseC	fig|6666666.229914.peg.2019
Orphan_regulatory_proteins	Sensory histidine kinase QseC	fig|6666666.229914.peg.2020
Orphan_regulatory_proteins	Two-component system response regulator QseB	fig|6666666.229914.peg.2021
Orphan_regulatory_proteins	Two-component system response regulator QseB	fig|6666666.229914.peg.2022
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229914.peg.1523
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229914.peg.1533
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229914.peg.1567
Osmotic_stress_cluster	Heat shock (predicted periplasmic) protein YciM, precursor	fig|6666666.229914.peg.1938
Osmotic_stress_cluster	Osmotically inducible lipoprotein B precursor	fig|6666666.229914.peg.2157
Osmotic_stress_cluster	Phosphatidylglycerophosphatase B (EC 3.1.3.27)	fig|6666666.229914.peg.2203
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.229914.peg.1196
Oxidative_stress	Ferric uptake regulation protein FUR	fig|6666666.229914.peg.1932
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.229914.peg.1425
Oxidative_stress	Fumarate and nitrate reduction regulatory protein	fig|6666666.229914.peg.1836
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.229914.peg.389
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.229914.peg.1425
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229914.peg.53
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.229914.peg.1425
Oxidative_stress	Paraquat-inducible protein A	fig|6666666.229914.peg.2271
Oxidative_stress	Paraquat-inducible protein B	fig|6666666.229914.peg.2272
Oxidative_stress	Paraquat-inducible protein B	fig|6666666.229914.peg.2273
Oxidative_stress	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.229914.peg.5
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.229914.peg.596
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.229914.peg.593
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.229914.peg.592
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229914.peg.99
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229914.peg.1479
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229914.peg.987
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.229914.peg.977
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.229914.peg.976
Pentose_phosphate_pathway	Transketolase, C-terminal section (EC 2.2.1.1)	fig|6666666.229914.peg.2324
Pentose_phosphate_pathway	Transketolase, N-terminal section (EC 2.2.1.1)	fig|6666666.229914.peg.2325
Peptide_ABC_transport_system_Sap	Peptide transport periplasmic protein SapA	fig|6666666.229914.peg.1597
Peptide_ABC_transport_system_Sap	Peptide transport system ATP-binding protein SapD	fig|6666666.229914.peg.1593
Peptide_ABC_transport_system_Sap	Peptide transport system ATP-binding protein SapD	fig|6666666.229914.peg.1594
Peptide_ABC_transport_system_Sap	Peptide transport system ATP-binding protein SapF	fig|6666666.229914.peg.1592
Peptide_ABC_transport_system_Sap	Peptide transport system permease protein SapB	fig|6666666.229914.peg.1596
Peptide_ABC_transport_system_Sap	Peptide transport system permease protein SapC	fig|6666666.229914.peg.1595
Peptide_methionine_sulfoxide_reductase	Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase	fig|6666666.229914.peg.1510
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229914.peg.1511
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229914.peg.1511
Peptide_methionine_sulfoxide_reductase	Thiol:disulfide oxidoreductase associated with MetSO reductase	fig|6666666.229914.peg.1509
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229914.peg.1083
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229914.peg.1075
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229914.peg.369
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229914.peg.2190
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229914.peg.418
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229914.peg.180
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229914.peg.2407
Peptidoglycan_Biosynthesis	Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)	fig|6666666.229914.peg.2222
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.229914.peg.1038
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.229914.peg.1039
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229914.peg.877
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229914.peg.1584
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229914.peg.2334
Peptidoglycan_Biosynthesis	Murein-DD-endopeptidase (EC 3.4.99.-)	fig|6666666.229914.peg.1846
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229914.peg.418
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229914.peg.366
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.229914.peg.1080
Peptidoglycan_Biosynthesis	Rare lipoprotein A precursor	fig|6666666.229914.peg.368
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.229914.peg.367
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229914.peg.249
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229914.peg.2401
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229914.peg.1077
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229914.peg.1076
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229914.peg.1079
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229914.peg.1082
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229914.peg.1081
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229914.peg.1075
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229914.peg.1076
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)	fig|6666666.229914.peg.2378
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229914.peg.1079
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229914.peg.1082
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229914.peg.1081
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.229914.peg.111
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.229914.peg.346
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229914.peg.386
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229914.peg.171
Peptidyl-prolyl_cis-trans_isomerase	Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8)	fig|6666666.229914.peg.1180
Peptidyl-prolyl_cis-trans_isomerase	Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)	fig|6666666.229914.peg.79
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229914.peg.914
Periplasmic_Stress_Response	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229914.peg.687
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229914.peg.689
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegQ, serine protease	fig|6666666.229914.peg.1534
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegS	fig|6666666.229914.peg.2055
Periplasmic_Stress_Response	Sigma factor RpoE negative regulatory protein RseA	fig|6666666.229914.peg.719
Periplasmic_Stress_Response	Sigma factor RpoE negative regulatory protein RseB precursor	fig|6666666.229914.peg.720
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229914.peg.914
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase	fig|6666666.229914.peg.19
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.229914.peg.1312
Periplasmic_disulfide_interchange	Periplasmic thiol:disulfide interchange protein DsbA	fig|6666666.229914.peg.1128
Periplasmic_disulfide_interchange	Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation	fig|6666666.229914.peg.45
Periplasmic_disulfide_interchange	Thiol:disulfide interchange protein DsbC	fig|6666666.229914.peg.2079
Persister_Cells	Cell division inhibitor	fig|6666666.229914.peg.2043
Persister_Cells	HipA protein	fig|6666666.229914.peg.1419
Persister_Cells	HipB protein	fig|6666666.229914.peg.1421
Phage_baseplate_proteins	Phage baseplate (uncharacterized for now)	fig|6666666.229914.peg.1255
Phage_capsid_proteins	Phage major capsid protein	fig|6666666.229914.peg.1974
Phage_lysis_modules	Phage endolysin	fig|6666666.229914.peg.1231
Phage_packaging_machinery	Phage terminase small subunit	fig|6666666.229914.peg.1968
Phage_packaging_machinery	Phage terminase, large subunit	fig|6666666.229914.peg.1235
Phage_packaging_machinery	Phage terminase, small subunit	fig|6666666.229914.peg.1234
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229914.peg.1259
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229914.peg.1260
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229914.peg.1261
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229914.peg.1770
Phage_tail_proteins	Phage tail length tape-measure protein	fig|6666666.229914.peg.1983
Phage_tail_proteins	Phage tape measure protein	fig|6666666.229914.peg.1251
Phage_tail_proteins_2	Phage tail length tape-measure protein	fig|6666666.229914.peg.1983
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.229914.peg.1472
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229914.peg.1070
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229914.peg.2109
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229914.peg.2109
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57)	fig|6666666.229914.peg.1453
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.229914.peg.1070
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Transcriptional repressor protein TyrR	fig|6666666.229914.peg.1600
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229914.peg.764
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229914.peg.992
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.229914.peg.932
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229914.peg.2145
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.229914.peg.2144
Phosphate_metabolism	Phosphate transport regulator (distant homolog of PhoU)	fig|6666666.229914.peg.1485
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.229914.peg.1484
Phosphoglycerate_mutase_protein_family	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229914.peg.1268
Phosphoglycerate_mutase_protein_family	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229914.peg.1161
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229914.peg.748
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229914.peg.1159
Phosphoglycerate_mutase_protein_family	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229914.peg.1162
Phosphoglycerate_transport_system	Phosphoglycerate transport regulatory protein PgtC	fig|6666666.229914.peg.1898
Phosphoglycerate_transport_system	Phosphoglycerate transport regulatory protein PgtC	fig|6666666.229914.peg.1902
Phosphoglycerate_transport_system	Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-)	fig|6666666.229914.peg.1896
Phosphoglycerate_transport_system	Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-)	fig|6666666.229914.peg.1897
Phosphoglycerate_transport_system	Phosphoglycerate transport system transcriptional regulatory protein PgtA	fig|6666666.229914.peg.1895
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60)	fig|6666666.229914.peg.272
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] reductase (EC 1.1.1.100)	fig|6666666.229914.peg.271
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] synthase	fig|6666666.229914.peg.286
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like	fig|6666666.229914.peg.273
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Acyl carrier protein (ACP1)	fig|6666666.229914.peg.284
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Acyl carrier protein (ACP2)	fig|6666666.229914.peg.283
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein	fig|6666666.229914.peg.277
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG017861: hypothetical protein	fig|6666666.229914.peg.281
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase	fig|6666666.229914.peg.285
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG021862: membrane protein, exporter	fig|6666666.229914.peg.275
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG027190: Putative transmembrane protein	fig|6666666.229914.peg.276
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG085779: Lipoprotein	fig|6666666.229914.peg.274
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41)	fig|6666666.229914.peg.270
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG143263: Glycosyl transferase	fig|6666666.229914.peg.279
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase	fig|6666666.229914.peg.280
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase	fig|6666666.229914.peg.282
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Lysophospholipid acyltransferase	fig|6666666.229914.peg.278
Poly-gamma-glutamate_biosynthesis	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229914.peg.2018
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229914.peg.180
Polyadenylation_bacterial	Poly(A) polymerase (EC 2.7.7.19)	fig|6666666.229914.peg.2127
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229914.peg.456
Polyadenylation_bacterial	RNA-binding protein Hfq	fig|6666666.229914.peg.1602
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229914.peg.1482
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229914.peg.2076
Polyamine_Metabolism	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	fig|6666666.229914.peg.415
Polyamine_Metabolism	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	fig|6666666.229914.peg.2278
Polyamine_Metabolism	Arginine/ornithine antiporter ArcD	fig|6666666.229914.peg.156
Polyamine_Metabolism	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229914.peg.157
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229914.peg.2275
Polyamine_Metabolism	Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)	fig|6666666.229914.peg.2276
Polyamine_Metabolism	Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)	fig|6666666.229914.peg.2277
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229914.peg.154
Polyhydroxybutyrate_metabolism	D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)	fig|6666666.229914.peg.1146
Polyhydroxybutyrate_metabolism	Short chain fatty acids transporter	fig|6666666.229914.peg.153
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229914.peg.764
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229914.peg.992
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229914.peg.1670
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229914.peg.1670
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229914.peg.1331
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229914.peg.1670
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229914.peg.685
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229914.peg.386
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229914.peg.171
Potassium_homeostasis	Glutathione-regulated potassium-efflux system ATP-binding protein	fig|6666666.229914.peg.972
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.229914.peg.174
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229914.peg.1927
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229914.peg.501
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229914.peg.501
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229914.peg.175
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229914.peg.175
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	LSU ribosomal protein L9p	fig|6666666.229914.peg.629
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	Primosomal replication protein N	fig|6666666.229914.peg.631
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	SSU ribosomal protein S18p	fig|6666666.229914.peg.630
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	SSU ribosomal protein S6p	fig|6666666.229914.peg.632
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229914.peg.2081
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229914.peg.2081
Proline,_4-hydroxyproline_uptake_and_utilization	ProQ: influences osmotic activation of compatible solute ProP	fig|6666666.229914.peg.2270
Proline,_4-hydroxyproline_uptake_and_utilization	Proline/sodium symporter PutP (TC 2.A.21.2.1)	fig|6666666.229914.peg.2356
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.229914.peg.2372
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.229914.peg.344
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.229914.peg.345
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229914.peg.1197
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229914.peg.2431
Proline_Synthesis	RNA-binding C-terminal domain PUA	fig|6666666.229914.peg.344
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229914.peg.2124
Proteasome_bacterial	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229914.peg.554
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229914.peg.553
Proteasome_bacterial	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229914.peg.938
Proteasome_bacterial	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229914.peg.937
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229914.peg.80
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229914.peg.1887
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.229914.peg.1196
Protection_from_Reactive_Oxygen_Species	Cytochrome c551 peroxidase (EC 1.11.1.5)	fig|6666666.229914.peg.1740
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229914.peg.53
Protection_from_Reactive_Oxygen_Species	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.229914.peg.5
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229914.peg.2347
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229914.peg.2346
Protein_chaperones	Chaperone protein HscA	fig|6666666.229914.peg.1285
Protein_chaperones	Chaperone protein HscB	fig|6666666.229914.peg.1286
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229914.peg.1068
Protein_chaperones	ClpB protein	fig|6666666.229914.peg.296
Protein_chaperones	ClpB protein	fig|6666666.229914.peg.706
Protein_chaperones	ClpB protein	fig|6666666.229914.peg.707
Protein_chaperones	DnaJ-class molecular chaperone CbpA	fig|6666666.229914.peg.2360
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229914.peg.1027
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.229914.peg.170
Protein_deglycation	Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation	fig|6666666.229914.peg.1654
Protein_degradation	Oligopeptidase A (EC 3.4.24.70)	fig|6666666.229914.peg.1638
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229914.peg.554
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229914.peg.553
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229914.peg.938
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229914.peg.937
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229914.peg.80
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229914.peg.1887
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229914.peg.296
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229914.peg.706
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229914.peg.707
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229914.peg.1487
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229914.peg.2287
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegQ, serine protease	fig|6666666.229914.peg.1534
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegS	fig|6666666.229914.peg.2055
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229914.peg.1331
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229914.peg.1670
Purine_Utilization	Guanine-hypoxanthine permease	fig|6666666.229914.peg.1494
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229914.peg.2025
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229914.peg.264
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229914.peg.1922
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229914.peg.1489
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229914.peg.918
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.229914.peg.2358
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.229914.peg.1499
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.229914.peg.186
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229914.peg.448
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229914.peg.2159
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229914.peg.999
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229914.peg.201
Purine_conversions	Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR	fig|6666666.229914.peg.1862
Purine_conversions	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.229914.peg.2084
Purine_conversions	Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.229914.peg.725
Purine_nucleotide_synthesis_regulator	Purine nucleotide synthesis repressor	fig|6666666.229914.peg.2102
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229914.peg.2388
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229914.peg.1671
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229914.peg.2159
Putative_TldE-TldD_proteolytic_complex	FIG138315: Putative alpha helix protein	fig|6666666.229914.peg.446
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229914.peg.2337
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229914.peg.447
Putative_sugar_ABC_transporter_(ytf_cluster)	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229914.peg.2376
Putative_sugar_ABC_transporter_(ytf_cluster)	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229914.peg.2377
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229914.peg.1511
Putative_sugar_ABC_transporter_(ytf_cluster)	Uncharacterized protein YtfM precursor	fig|6666666.229914.peg.761
Putative_sugar_ABC_transporter_(ytf_cluster)	Uncharacterized protein YtfM precursor	fig|6666666.229914.peg.762
Putative_sugar_ABC_transporter_(ytf_cluster)	Uncharacterized protein YtfN	fig|6666666.229914.peg.763
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229914.peg.1669
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229914.peg.98
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229914.peg.187
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229914.peg.1473
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.229914.peg.1496
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.229914.peg.192
Pyrimidine_utilization	Uracil permease	fig|6666666.229914.peg.77
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.229914.peg.1704
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229914.peg.2048
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229914.peg.65
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229914.peg.65
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.229914.peg.64
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229914.peg.54
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	fig|6666666.229914.peg.1800
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.229914.peg.1799
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)	fig|6666666.229914.peg.1801
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229914.peg.765
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229914.peg.1790
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229914.peg.1446
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229914.peg.2123
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.229914.peg.2317
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229914.peg.2114
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	fig|6666666.229914.peg.2113
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229914.peg.2353
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229914.peg.2124
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229914.peg.2115
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229914.peg.2191
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8)	fig|6666666.229914.peg.1180
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229914.peg.82
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229914.peg.1327
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229914.peg.1328
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229914.peg.1678
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229914.peg.1679
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229914.peg.2444
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229914.peg.754
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.229914.peg.1060
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.229914.peg.1430
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229914.peg.1431
Queuosine-Archaeosine_Biosynthesis	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229914.peg.100
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229914.peg.1454
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229914.peg.1452
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229914.peg.524
RNA_methylation	16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176)	fig|6666666.229914.peg.176
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229914.peg.208
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.229914.peg.847
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-)	fig|6666666.229914.peg.2452
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-)	fig|6666666.229914.peg.2453
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)	fig|6666666.229914.peg.1057
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229914.peg.623
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229914.peg.365
RNA_methylation	LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM	fig|6666666.229914.peg.2052
RNA_methylation	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229914.peg.1910
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229914.peg.68
RNA_methylation	Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52)	fig|6666666.229914.peg.1372
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229914.peg.805
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229914.peg.913
RNA_methylation	hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]	fig|6666666.229914.peg.646
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229914.peg.405
RNA_methylation	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229914.peg.1024
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229914.peg.617
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.229914.peg.510
RNA_methylation	tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)	fig|6666666.229914.peg.1166
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229914.peg.830
RNA_methylation	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229914.peg.1130
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229914.peg.812
RNA_methylation	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229914.peg.1291
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229914.peg.2464
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229914.peg.405
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229914.peg.401
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229914.peg.2464
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229914.peg.2465
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229914.peg.2468
RNA_modification_cluster	Protein YidD	fig|6666666.229914.peg.2466
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229914.peg.2467
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229914.peg.489
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229914.peg.565
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229914.peg.564
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.229914.peg.185
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.229914.peg.622
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.229914.peg.1633
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229914.peg.2355
RNA_processing_and_degradation,_bacterial	Exoribonuclease II (EC 3.1.13.1)	fig|6666666.229914.peg.1426
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.229914.peg.1310
RNA_processing_and_degradation,_bacterial	Ribonuclease E inhibitor RraA	fig|6666666.229914.peg.443
RNA_processing_and_degradation,_bacterial	Ribonuclease E inhibitor RraB	fig|6666666.229914.peg.173
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229914.peg.2462
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.512
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.1677
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229914.peg.2107
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229914.peg.1308
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229914.peg.608
RNA_pseudouridine_syntheses	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.28
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.982
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.1879
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229914.peg.2150
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229914.peg.1891
Rcs_phosphorelay_signal_transduction_pathway	DnaJ-like protein DjlA	fig|6666666.229914.peg.836
RecA_and_RecX	RecA protein	fig|6666666.229914.peg.973
RecA_and_RecX	Regulatory protein RecX	fig|6666666.229914.peg.974
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229914.peg.724
Recycling_of_Peptidoglycan_Amino_Acids	AmpG permease	fig|6666666.229914.peg.1490
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229914.peg.1605
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD	fig|6666666.229914.peg.459
Recycling_of_Peptidoglycan_Amino_Acids	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)	fig|6666666.229914.peg.2378
Recycling_of_Peptidoglycan_Amino_Sugars	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-)	fig|6666666.229914.peg.417
Recycling_of_Peptidoglycan_Amino_Sugars	Beta N-acetyl-glucosaminidase (EC 3.2.1.52)	fig|6666666.229914.peg.2451
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229914.peg.1933
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229914.peg.1934
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229914.peg.733
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229914.peg.1525
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229914.peg.1527
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229914.peg.1518
Respiratory_dehydrogenases_1	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229914.peg.1477
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229914.peg.1519
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229914.peg.1520
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229914.peg.1869
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229914.peg.2301
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229914.peg.1719
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229914.peg.2303
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229914.peg.2307
Rhamnose_containing_glycans	DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase	fig|6666666.229914.peg.2208
Rhamnose_containing_glycans	DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase	fig|6666666.229914.peg.2226
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229914.peg.2220
Rhamnose_containing_glycans	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229914.peg.2216
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229914.peg.1492
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229914.peg.2218
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.229914.peg.2219
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229914.peg.2206
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229914.peg.2207
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229914.peg.2221
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229914.peg.984
Riboflavin,_FMN_and_FAD_metabolism	5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase	fig|6666666.229914.peg.289
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229914.peg.2054
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229914.peg.1707
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229914.peg.2054
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229914.peg.110
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229914.peg.2204
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229914.peg.110
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229914.peg.2185
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229914.peg.984
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase	fig|6666666.229914.peg.289
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229914.peg.2054
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229914.peg.1707
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229914.peg.2054
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229914.peg.1351
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229914.peg.110
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229914.peg.2204
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229914.peg.2184
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229914.peg.110
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229914.peg.2185
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229914.peg.1024
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229914.peg.2150
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229914.peg.984
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229914.peg.2054
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229914.peg.1707
Riboflavin_synthesis_cluster	Diacylglycerol kinase (EC 2.7.1.107)	fig|6666666.229914.peg.849
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229914.peg.2054
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229914.peg.2204
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229914.peg.1519
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229914.peg.1520
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229914.peg.1937
Riboflavin_synthesis_cluster	Phosphatidylglycerophosphatase A (EC 3.1.3.27)	fig|6666666.229914.peg.1710
Riboflavin_synthesis_cluster	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.229914.peg.302
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229914.peg.2185
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229914.peg.987
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229914.peg.1709
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.229914.peg.1708
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229914.peg.1469
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229914.peg.1470
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229914.peg.694
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229914.peg.694
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229914.peg.1184
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229914.peg.1186
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229914.peg.1718
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229914.peg.1792
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229914.peg.1715
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229914.peg.1791
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.229914.peg.2053
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229914.peg.169
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229914.peg.661
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229914.peg.662
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229914.peg.482
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.229914.peg.567
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.229914.peg.570
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.229914.peg.1881
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.229914.peg.475
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.229914.peg.483
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.229914.peg.141
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.229914.peg.490
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.229914.peg.481
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.229914.peg.618
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229914.peg.569
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.229914.peg.1663
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.229914.peg.1330
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.229914.peg.143
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.229914.peg.146
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.229914.peg.476
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.229914.peg.1848
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.229914.peg.1329
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.229914.peg.867
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.229914.peg.140
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.229914.peg.145
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.229914.peg.861
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.229914.peg.1314
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-dependent	fig|6666666.229914.peg.861
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.229914.peg.1314
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.229914.peg.354
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.229914.peg.866
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.229914.peg.866
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.229914.peg.2468
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.229914.peg.485
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.229914.peg.1315
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.229914.peg.148
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.229914.peg.147
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.229914.peg.477
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.229914.peg.480
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229914.peg.566
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.229914.peg.629
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.229914.peg.149
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.229914.peg.487
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.229914.peg.661
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.229914.peg.662
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.229914.peg.486
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.229914.peg.478
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.229914.peg.478
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.229914.peg.38
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.229914.peg.615
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.229914.peg.139
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.229914.peg.630
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.229914.peg.630
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.229914.peg.144
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.229914.peg.1941
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.229914.peg.112
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.229914.peg.130
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.229914.peg.843
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.229914.peg.142
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.229914.peg.488
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.229914.peg.482
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.229914.peg.632
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.229914.peg.660
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.229914.peg.479
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.229914.peg.1880
Ribosome_activity_modulation	Ribosome hibernation protein YfiA	fig|6666666.229914.peg.538
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229914.peg.616
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229914.peg.365
Ribosome_biogenesis_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.229914.peg.1310
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.512
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.1677
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229914.peg.1308
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229914.peg.608
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.229914.peg.534
Ribosome_biogenesis_bacterial	Ribosomal protein S6 glutaminyl transferase	fig|6666666.229914.peg.1411
Ribosome_biogenesis_bacterial	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229914.peg.1370
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229914.peg.913
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229914.peg.1735
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229914.peg.617
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229914.peg.683
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229914.peg.843
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229914.peg.845
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229914.peg.681
Rrf2_family_transcriptional_regulators	Iron-sulfur cluster regulator IscR	fig|6666666.229914.peg.1290
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.229914.peg.1353
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229914.peg.1351
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229914.peg.1354
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229914.peg.1355
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	HflC protein	fig|6666666.229914.peg.2427
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	HflK protein	fig|6666666.229914.peg.2425
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	HflK protein	fig|6666666.229914.peg.2426
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229914.peg.1282
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229914.peg.1454
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like	fig|6666666.229914.peg.1281
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229914.peg.1606
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229914.peg.1452
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.229914.peg.714
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229914.peg.2140
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.229914.peg.713
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229914.peg.2258
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229914.peg.2259
Septum_site-determining_cluster_Min	Septum site-determining protein MinC	fig|6666666.229914.peg.2171
Serine-glyoxylate_cycle	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229914.peg.2065
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229914.peg.610
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229914.peg.154
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.229914.peg.809
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.449
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229914.peg.1612
Serine-glyoxylate_cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229914.peg.2046
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229914.peg.223
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229914.peg.223
Serine-glyoxylate_cycle	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229914.peg.765
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229914.peg.1376
Serine-glyoxylate_cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229914.peg.1053
Serine-glyoxylate_cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229914.peg.1054
Serine-glyoxylate_cycle	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	fig|6666666.229914.peg.2261
Serine-glyoxylate_cycle	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	fig|6666666.229914.peg.2262
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229914.peg.98
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229914.peg.1473
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229914.peg.114
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229914.peg.114
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229914.peg.1376
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229914.peg.106
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229914.peg.1323
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229914.peg.1640
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229914.peg.1641
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229914.peg.772
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229914.peg.418
Sialic_Acid_Metabolism	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229914.peg.1560
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229914.peg.418
Sialic_Acid_Metabolism	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.229914.peg.1561
Sialic_Acid_Metabolism	N-acetylmannosamine kinase (EC 2.7.1.60)	fig|6666666.229914.peg.1557
Sialic_Acid_Metabolism	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)	fig|6666666.229914.peg.1556
Sialic_Acid_Metabolism	N-acetylneuraminate lyase (EC 4.1.3.3)	fig|6666666.229914.peg.1559
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229914.peg.1540
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229914.peg.1541
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229914.peg.1552
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229914.peg.1540
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229914.peg.1541
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229914.peg.1552
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229914.peg.1540
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229914.peg.1541
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229914.peg.1552
Sialic_Acid_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.229914.peg.207
Sialic_Acid_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.229914.peg.231
Sialic_Acid_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229914.peg.207
Sialic_Acid_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229914.peg.231
Sialic_Acid_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229914.peg.206
Sialic_Acid_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229914.peg.230
Sialic_Acid_Metabolism	PTS system, mannose-specific IID component (EC 2.7.1.69)	fig|6666666.229914.peg.205
Sialic_Acid_Metabolism	PTS system, mannose-specific IID component (EC 2.7.1.69)	fig|6666666.229914.peg.229
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229914.peg.1160
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229914.peg.2168
Sialic_Acid_Metabolism	Putative sugar isomerase involved in processing of exogenous sialic acid	fig|6666666.229914.peg.457
Sialic_Acid_Metabolism	Sialic acid utilization regulator, RpiR family	fig|6666666.229914.peg.1558
Sialic_Acid_Metabolism	Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase	fig|6666666.229914.peg.1553
Sialic_Acid_Metabolism	TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter	fig|6666666.229914.peg.1554
Sialic_Acid_Metabolism	TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein	fig|6666666.229914.peg.1555
Sialic_Acid_Metabolism	TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter	fig|6666666.229914.peg.1554
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229914.peg.106
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229914.peg.2461
Single-Rhodanese-domain_proteins	Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1)	fig|6666666.229914.peg.671
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome C553 (soluble cytochrome f)	fig|6666666.229914.peg.1576
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.229914.peg.14
Soluble_cytochromes_and_functionally_related_electron_carriers	Ferredoxin	fig|6666666.229914.peg.1713
Soluble_cytochromes_and_functionally_related_electron_carriers	Ferredoxin, 2Fe-2S	fig|6666666.229914.peg.1284
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229914.peg.116
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.229914.peg.1499
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229914.peg.224
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.229914.peg.1168
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.229914.peg.1169
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229914.peg.630
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229914.peg.1324
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229914.peg.1325
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229914.peg.990
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229914.peg.989
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.229914.peg.992
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229914.peg.988
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229914.peg.1084
Stationary_phase_repair_cluster	FIG139438: lipoprotein B	fig|6666666.229914.peg.993
Stationary_phase_repair_cluster	Lipoprotein NlpD	fig|6666666.229914.peg.995
Stationary_phase_repair_cluster	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229914.peg.991
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.229914.peg.848
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.229914.peg.184
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.229914.peg.184
Succinate_dehydrogenase	Fumarate reductase subunit C	fig|6666666.229914.peg.1055
Succinate_dehydrogenase	Fumarate reductase subunit D	fig|6666666.229914.peg.1056
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229914.peg.1053
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229914.peg.1054
Sulfate_reduction-associated_complexes	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229914.peg.2311
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229914.peg.2311
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229914.peg.382
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229914.peg.383
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229914.peg.384
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229914.peg.603
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229914.peg.604
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.229914.peg.2264
TCA_Cycle	Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	fig|6666666.229914.peg.1007
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229914.peg.2113
TCA_Cycle	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	fig|6666666.229914.peg.2113
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.229914.peg.2263
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.229914.peg.1413
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229914.peg.2046
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229914.peg.1053
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229914.peg.1054
TCA_Cycle	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	fig|6666666.229914.peg.2261
TCA_Cycle	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	fig|6666666.229914.peg.2262
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, large permease component	fig|6666666.229914.peg.88
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, large permease component	fig|6666666.229914.peg.89
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, periplasmic component	fig|6666666.229914.peg.90
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229914.peg.989
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229914.peg.2216
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid translocation permease protein TagG	fig|6666666.229914.peg.2217
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229914.peg.1590
Tellurite_resistance:_Chromosomal_determinants	Tellurite resistance protein TehB	fig|6666666.229914.peg.2116
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.229914.peg.1357
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229914.peg.1358
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229914.peg.2197
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229914.peg.392
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229914.peg.2196
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.229914.peg.1357
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229914.peg.1358
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229914.peg.2197
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229914.peg.392
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229914.peg.2196
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229914.peg.659
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229914.peg.659
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229914.peg.1669
Thiamin_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229914.peg.1289
Thiamin_biosynthesis	Rhodanese-like domain required for thiamine synthesis	fig|6666666.229914.peg.1871
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229914.peg.1905
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229914.peg.2289
Thiamin_biosynthesis	Thiamin ABC transporter, substrate-binding component	fig|6666666.229914.peg.2291
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229914.peg.2290
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229914.peg.1709
Thiamin_biosynthesis	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229914.peg.1871
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.229914.peg.389
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229914.peg.2411
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229914.peg.2412
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.229914.peg.1563
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229914.peg.2195
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229914.peg.2123
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229914.peg.2124
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.229914.peg.64
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.42
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.236
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.237
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.238
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229914.peg.1829
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229914.peg.298
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229914.peg.2180
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.229914.peg.2420
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.229914.peg.2420
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229914.peg.2421
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229914.peg.2423
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.229914.peg.1359
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.229914.peg.929
Ton_and_Tol_transport_systems	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229914.peg.928
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229914.peg.930
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.229914.peg.1360
Ton_and_Tol_transport_systems	Peptidoglycan-associated lipoprotein precursor	fig|6666666.229914.peg.1364
Ton_and_Tol_transport_systems	Tol biopolymer transport system, TolR protein	fig|6666666.229914.peg.1361
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229914.peg.1362
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229914.peg.2410
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229914.peg.1756
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229914.peg.1761
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229914.peg.1762
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229914.peg.1763
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229914.peg.1764
Ton_and_Tol_transport_systems	tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins	fig|6666666.229914.peg.1363
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229914.peg.1501
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229914.peg.643
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229914.peg.1687
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229914.peg.1807
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229914.peg.644
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229914.peg.1686
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229914.peg.1808
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229914.peg.1467
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229914.peg.1876
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229914.peg.1466
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229914.peg.1878
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229914.peg.1500
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229914.peg.2230
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229914.peg.2231
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229914.peg.2154
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229914.peg.741
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229914.peg.742
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229914.peg.749
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229914.peg.571
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229914.peg.2189
Transcription_factors_bacterial	Transcription elongation factor GreB	fig|6666666.229914.peg.750
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229914.peg.362
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229914.peg.2153
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229914.peg.1708
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229914.peg.1093
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229914.peg.132
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoE	fig|6666666.229914.peg.718
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoH	fig|6666666.229914.peg.247
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE negative regulatory protein RseA	fig|6666666.229914.peg.719
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE negative regulatory protein RseB precursor	fig|6666666.229914.peg.720
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE regulatory protein RseC	fig|6666666.229914.peg.721
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229914.peg.165
Transcription_repair_cluster	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229914.peg.418
Transcription_repair_cluster	LSU ribosomal protein L25p	fig|6666666.229914.peg.1848
Transcription_repair_cluster	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229914.peg.418
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229914.peg.116
Transcription_repair_cluster	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229914.peg.1479
Transcription_repair_cluster	Transcription-repair coupling factor	fig|6666666.229914.peg.1093
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229914.peg.659
Translation_elongation_factor_P_lysylation	Lysyl-lysine 2,3-aminomutase	fig|6666666.229914.peg.2435
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.229914.peg.2436
Translation_elongation_factor_P_lysylation	Translation elongation factor P Lys34:lysine transferase	fig|6666666.229914.peg.1051
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229914.peg.659
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.229914.peg.2460
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.229914.peg.2436
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.229914.peg.845
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229914.peg.658
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229914.peg.735
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229914.peg.736
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229914.peg.177
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229914.peg.2151
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229914.peg.1002
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229914.peg.1959
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229914.peg.2152
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229914.peg.1661
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.229914.peg.1936
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229914.peg.1587
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229914.peg.2176
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229914.peg.2081
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.229914.peg.2013
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229914.peg.178
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229914.peg.116
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229914.peg.2175
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229914.peg.683
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229914.peg.1324
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229914.peg.1325
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229914.peg.2071
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229914.peg.2072
Transport_of_Nickel_and_Cobalt	Additional component NikL of nickel ECF transporter	fig|6666666.229914.peg.2074
Transport_of_Nickel_and_Cobalt	Additional periplasmic component NikK of nickel ECF transporter	fig|6666666.229914.peg.2075
Transport_of_Nickel_and_Cobalt	Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)	fig|6666666.229914.peg.939
Transport_of_Nickel_and_Cobalt	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229914.peg.2073
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229914.peg.498
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229914.peg.499
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229914.peg.500
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229914.peg.501
Transport_system_clustering_with_HemG	Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)	fig|6666666.229914.peg.502
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229914.peg.1854
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229914.peg.1853
Trehalose_Uptake_and_Utilization	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)	fig|6666666.229914.peg.1730
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229914.peg.1138
Triacylglycerol_metabolism	Lysophospholipase L2 (EC 3.1.1.5)	fig|6666666.229914.peg.653
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229914.peg.1649
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229914.peg.1809
Tryptophan_synthesis	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.229914.peg.1811
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.229914.peg.1812
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229914.peg.1805
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229914.peg.1806
Tryptophan_synthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229914.peg.1651
Tryptophan_synthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229914.peg.1650
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229914.peg.1805
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229914.peg.1806
Tryptophan_synthesis	Transcriptional repressor protein TrpR	fig|6666666.229914.peg.1037
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229914.peg.1793
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229914.peg.1794
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.229914.peg.470
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.229914.peg.471
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.229914.peg.472
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.229914.peg.1087
Type_IV_pilus	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229914.peg.884
Type_IV_pilus	Leader peptidase (Prepilin peptidase) (EC 3.4.23.43)	fig|6666666.229914.peg.463
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229914.peg.877
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229914.peg.1584
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229914.peg.2334
Type_IV_pilus	N-methyltransferase (EC 2.1.1.-)	fig|6666666.229914.peg.463
Type_IV_pilus	Type IV fimbrial assembly protein PilC	fig|6666666.229914.peg.462
Type_IV_pilus	Type IV fimbrial assembly, ATPase PilB	fig|6666666.229914.peg.461
Type_IV_pilus	Type IV pilin PilA	fig|6666666.229914.peg.460
Type_IV_pilus	Type IV pilus biogenesis protein PilM	fig|6666666.229914.peg.878
Type_IV_pilus	Type IV pilus biogenesis protein PilN	fig|6666666.229914.peg.879
Type_IV_pilus	Type IV pilus biogenesis protein PilQ	fig|6666666.229914.peg.881
Type_IV_pilus	Type IV pilus biogenesis protein PilQ	fig|6666666.229914.peg.882
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229914.peg.772
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229914.peg.418
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229914.peg.418
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229914.peg.1160
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229914.peg.2168
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229914.peg.249
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229914.peg.2401
USS-DB-7	ClpB protein	fig|6666666.229914.peg.296
USS-DB-7	ClpB protein	fig|6666666.229914.peg.706
USS-DB-7	ClpB protein	fig|6666666.229914.peg.707
Ubiquinone_Biosynthesis	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-)	fig|6666666.229914.peg.1333
Ubiquinone_Biosynthesis	Chorismate--pyruvate lyase (EC 4.1.3.40)	fig|6666666.229914.peg.181
Ubiquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229914.peg.4
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229914.peg.117
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229914.peg.2361
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229914.peg.1164
Universal_GTPases	GTP-binding protein Era	fig|6666666.229914.peg.2463
Universal_GTPases	GTP-binding protein HflX	fig|6666666.229914.peg.1601
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229914.peg.1326
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.229914.peg.2408
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229914.peg.2464
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229914.peg.1634
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229914.peg.209
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229914.peg.925
Universal_GTPases	Translation elongation factor G	fig|6666666.229914.peg.659
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229914.peg.2460
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229914.peg.658
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229914.peg.735
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229914.peg.736
Universal_GTPases	Translation initiation factor 2	fig|6666666.229914.peg.1959
Universal_GTPases	Translation initiation factor 2	fig|6666666.229914.peg.2152
Universal_stress_protein_family	Universal stress protein A	fig|6666666.229914.peg.796
Universal_stress_protein_family	Universal stress protein E	fig|6666666.229914.peg.1835
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229914.peg.1511
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.229914.peg.2285
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.229914.peg.1849
Uptake_of_selenate_and_selenite	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.229914.peg.1723
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.229914.peg.2458
Utilization_of_glutathione_as_a_sulphur_source	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229914.peg.2018
VC0266	Hypothetical protein VC0266 (sugar utilization related?)	fig|6666666.229914.peg.118
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229914.peg.2048
Widespread_colonization_island	Flp pilus assembly protein RcpB	fig|6666666.229914.peg.1101
Widespread_colonization_island	Flp pilus assembly protein RcpC/CpaB	fig|6666666.229914.peg.1099
Widespread_colonization_island	Flp pilus assembly protein TadB	fig|6666666.229914.peg.1104
Widespread_colonization_island	Flp pilus assembly protein TadD, contains TPR repeat	fig|6666666.229914.peg.1106
Widespread_colonization_island	Flp pilus assembly surface protein TadF, ATP/GTP-binding motif	fig|6666666.229914.peg.1107
Widespread_colonization_island	Protein TadG, associated with Flp pilus assembly	fig|6666666.229914.peg.1108
Widespread_colonization_island	Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily	fig|6666666.229914.peg.1103
Widespread_colonization_island	Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly	fig|6666666.229914.peg.1102
Widespread_colonization_island	Type II/IV secretion system protein TadC, associated with Flp pilus assembly	fig|6666666.229914.peg.1105
Widespread_colonization_island	Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly	fig|6666666.229914.peg.1100
Widespread_colonization_island	Type IV prepilin peptidase TadV/CpaA	fig|6666666.229914.peg.1098
Xanthine_Metabolism_in_Bacteria	Na+ dependent nucleoside transporter NupC	fig|6666666.229914.peg.202
Xanthine_Metabolism_in_Bacteria	Xanthine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.229914.peg.2084
Xylose_utilization	D-xylose transport ATP-binding protein XylG	fig|6666666.229914.peg.241
Xylose_utilization	Xylose ABC transporter, periplasmic xylose-binding protein XylF	fig|6666666.229914.peg.242
Xylose_utilization	Xylose ABC transporter, permease protein XylH	fig|6666666.229914.peg.239
Xylose_utilization	Xylose ABC transporter, permease protein XylH	fig|6666666.229914.peg.240
Xylose_utilization	Xylose activator XylR (AraC family)	fig|6666666.229914.peg.234
Xylose_utilization	Xylose isomerase (EC 5.3.1.5)	fig|6666666.229914.peg.243
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229914.peg.244
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229914.peg.1152
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.229914.peg.1183
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229914.peg.1735
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229914.peg.128
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229914.peg.1735
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229914.peg.1606
YrdC-YciO-Sua5_protein_family	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229914.peg.1832
YrdC-YciO-Sua5_protein_family	Hypothetical YciO protein, TsaC/YrdC paralog	fig|6666666.229914.peg.2108
YrdC-YciO-Sua5_protein_family	Peptide chain release factor 1	fig|6666666.229914.peg.2176
YrdC-YciO-Sua5_protein_family	Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p	fig|6666666.229914.peg.2323
YrdC-YciO-Sua5_protein_family	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229914.peg.2175
YrdC-YciO-Sua5_protein_family	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229914.peg.1370
YrdC-YciO-Sua5_protein_family	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229914.peg.627
YrdC-YciO-Sua5_protein_family	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229914.peg.1376
YrdC-YciO-Sua5_protein_family	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229914.peg.1735
YrdC-YciO-Sua5_protein_family	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229914.peg.128
YrdC-YciO-Sua5_protein_family	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229914.peg.1606
Zinc_regulated_enzymes	C4-type zinc finger protein, DksA/TraR family	fig|6666666.229914.peg.2128
Zinc_regulated_enzymes	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.229914.peg.1512
Zinc_regulated_enzymes	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229914.peg.1179
Zinc_regulated_enzymes	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229914.peg.2191
Zinc_regulated_enzymes	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229914.peg.1605
Zinc_regulated_enzymes	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.229914.peg.302
Zinc_regulated_enzymes	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.229914.peg.473
Zinc_regulated_enzymes	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229914.peg.1431
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.229914.peg.1773
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.229914.peg.1774
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.229914.peg.1775
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.229914.peg.1776
ar-431-EC_Molybdopterin-guanine_dinucleotide_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.229914.peg.1126
ar-431-EC_Molybdopterin-guanine_dinucleotide_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobB	fig|6666666.229914.peg.722
cAMP_signaling_in_bacteria	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.229914.peg.1063
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229914.peg.553
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229914.peg.1922
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229914.peg.759
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229914.peg.1486
cAMP_signaling_in_bacteria	Cyclic AMP receptor protein	fig|6666666.229914.peg.874
cAMP_signaling_in_bacteria	bifunctional hemolysin-adenylate cyclase precursor	fig|6666666.229914.peg.1378
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229914.peg.1073
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229914.peg.1074
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229914.peg.1078
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229914.peg.1072
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229914.peg.1075
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229914.peg.1076
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229914.peg.1073
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229914.peg.1074
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229914.peg.1072
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229914.peg.1077
dNTP_triphosphohydrolase_protein_family	Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR	fig|6666666.229914.peg.1862
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229914.peg.2220
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229914.peg.2218
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.229914.peg.2219
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229914.peg.2206
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229914.peg.2207
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229914.peg.2221
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229914.peg.1289
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA	fig|6666666.229914.peg.1752
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229914.peg.2464
mnm5U34_biosynthesis_bacteria	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229914.peg.1024
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusA	fig|6666666.229914.peg.496
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229914.peg.382
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229914.peg.383
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229914.peg.384
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229914.peg.401
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229914.peg.1189
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229914.peg.1737
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229914.peg.1738
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229914.peg.1833
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229914.peg.893
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229914.peg.2025
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229914.peg.264
pyrimidine_conversions	Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)	fig|6666666.229914.peg.2449
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.229914.peg.304
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229914.peg.2279
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229914.peg.1942
pyrimidine_conversions	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229914.peg.794
pyrimidine_conversions	Deoxycytidine triphosphate deaminase (EC 3.5.4.13)	fig|6666666.229914.peg.2364
pyrimidine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229914.peg.999
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229914.peg.201
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229914.peg.2195
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.229914.peg.126
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229914.peg.1150
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.229914.peg.1271
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229914.peg.78
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229914.peg.915
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48) [C1]	fig|6666666.229914.peg.2365
pyrimidine_conversions	Uridine phosphorylase (EC 2.4.2.3)	fig|6666666.229914.peg.163
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229914.peg.984
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229914.peg.110
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229914.peg.110
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229914.peg.2185
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229914.peg.1003
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.229914.peg.1003
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.927
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.1004
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229914.peg.1154
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229914.peg.1097
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229914.peg.1335
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229914.peg.797
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229914.peg.798
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229914.peg.1257
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229914.peg.2179
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229914.peg.1779
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229914.peg.1345
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229914.peg.1179
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.229914.peg.1685
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229914.peg.1200
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229914.peg.311
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229914.peg.305
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229914.peg.72
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229914.peg.107
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229914.peg.906
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.229914.peg.2082
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229914.peg.1282
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229914.peg.1818
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229914.peg.1819
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.229914.peg.2181
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.229914.peg.715
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229914.peg.2280
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229914.peg.1655
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229914.peg.985
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229914.peg.2147
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229914.peg.1417
tRNA_modification_Archaea	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229914.peg.1779
tRNA_modification_Archaea	COG1720: Uncharacterized conserved protein	fig|6666666.229914.peg.441
tRNA_modification_Archaea	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229914.peg.1289
tRNA_modification_Archaea	Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA	fig|6666666.229914.peg.1752
tRNA_modification_Archaea	GTP-binding protein Era	fig|6666666.229914.peg.2463
tRNA_modification_Archaea	Iron-sulfur cluster assembly scaffold protein IscU	fig|6666666.229914.peg.1288
tRNA_modification_Archaea	Predicted P-loop ATPase fused to an acetyltransferase COG1444	fig|6666666.229914.peg.1095
tRNA_modification_Archaea	Rhodanese-like domain required for thiamine synthesis	fig|6666666.229914.peg.1871
tRNA_modification_Archaea	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229914.peg.617
tRNA_modification_Archaea	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229914.peg.1130
tRNA_modification_Archaea	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229914.peg.1871
tRNA_modification_Archaea	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229914.peg.535
tRNA_modification_Archaea	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229914.peg.991
tRNA_modification_Archaea	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.982
tRNA_modification_Archaea	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.1879
tRNA_modification_Archaea	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229914.peg.1754
tRNA_modification_Archaea	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229914.peg.1335
tRNA_modification_Archaea	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229914.peg.1291
tRNA_modification_Bacteria	Believed to be involved in assembly of Fe-S clusters	fig|6666666.229914.peg.1283
tRNA_modification_Bacteria	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229914.peg.1832
tRNA_modification_Bacteria	COG1720: Uncharacterized conserved protein	fig|6666666.229914.peg.441
tRNA_modification_Bacteria	Chaperone protein HscA	fig|6666666.229914.peg.1285
tRNA_modification_Bacteria	Chaperone protein HscB	fig|6666666.229914.peg.1286
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229914.peg.1289
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229914.peg.2279
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229914.peg.1149
tRNA_modification_Bacteria	Ferredoxin, 2Fe-2S	fig|6666666.229914.peg.1284
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229914.peg.2191
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229914.peg.2464
tRNA_modification_Bacteria	Iron binding protein IscA for iron-sulfur cluster assembly	fig|6666666.229914.peg.1287
tRNA_modification_Bacteria	Iron-sulfur cluster assembly scaffold protein IscU	fig|6666666.229914.peg.1288
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229914.peg.365
tRNA_modification_Bacteria	Predicted P-loop ATPase fused to an acetyltransferase COG1444	fig|6666666.229914.peg.1095
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.229914.peg.1060
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.229914.peg.1430
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229914.peg.1431
tRNA_modification_Bacteria	Rhodanese-like domain required for thiamine synthesis	fig|6666666.229914.peg.1871
tRNA_modification_Bacteria	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.512
tRNA_modification_Bacteria	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.1677
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229914.peg.1454
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229914.peg.2140
tRNA_modification_Bacteria	hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]	fig|6666666.229914.peg.646
tRNA_modification_Bacteria	tRNA (5-methoxyuridine) 34 synthase	fig|6666666.229914.peg.2357
tRNA_modification_Bacteria	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229914.peg.1024
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229914.peg.617
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229914.peg.830
tRNA_modification_Bacteria	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229914.peg.1130
tRNA_modification_Bacteria	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	fig|6666666.229914.peg.1343
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusA	fig|6666666.229914.peg.496
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229914.peg.382
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229914.peg.383
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229914.peg.384
tRNA_modification_Bacteria	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229914.peg.1871
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229914.peg.535
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229914.peg.1603
tRNA_modification_Bacteria	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229914.peg.991
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.982
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.1879
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229914.peg.2150
tRNA_modification_Bacteria	tRNA pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229914.peg.1891
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229914.peg.401
tRNA_modification_Bacteria	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229914.peg.1754
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229914.peg.1495
tRNA_modification_Bacteria	tRNA-dihydrouridine synthase C (EC 1.-.-.-)	fig|6666666.229914.peg.835
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229914.peg.1452
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229914.peg.1335
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229914.peg.1272
tRNA_modification_Bacteria	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229914.peg.1291
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229914.peg.1482
tRNA_processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.229914.peg.1739
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229914.peg.2467
tRNA_processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.229914.peg.838
tRNA_processing	Ribonuclease T (EC 3.1.13.-)	fig|6666666.229914.peg.1338
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229914.peg.1603
tRNA_processing	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229914.peg.991
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.982
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229914.peg.1879
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229914.peg.2150
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229914.peg.1495
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229914.peg.1335
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229914.peg.1272
tRNAmodification_position_34	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229914.peg.2464
tRNAmodification_position_34	Predicted P-loop ATPase fused to an acetyltransferase COG1444	fig|6666666.229914.peg.1095
tRNAmodification_position_34	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229914.peg.1454
tRNAmodification_position_34	tRNA (5-methoxyuridine) 34 synthase	fig|6666666.229914.peg.2357
tRNAmodification_position_34	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229914.peg.1024
tRNAmodification_position_34	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	fig|6666666.229914.peg.1343
tRNAmodification_position_34	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229914.peg.401
tRNAmodification_position_34	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229914.peg.1495
tRNAmodification_position_34	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229914.peg.1452
tRNAmodification_position_34	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229914.peg.1272
tRNAs	tRNA-Ala-GGC	fig|6666666.229914.rna.37
tRNAs	tRNA-Arg-ACG	fig|6666666.229914.rna.12
tRNAs	tRNA-Arg-ACG	fig|6666666.229914.rna.13
tRNAs	tRNA-Arg-CCG	fig|6666666.229914.rna.52
tRNAs	tRNA-Cys-GCA	fig|6666666.229914.rna.39
tRNAs	tRNA-Gly-GCC	fig|6666666.229914.rna.40
tRNAs	tRNA-Gly-GCC	fig|6666666.229914.rna.60
tRNAs	tRNA-Gly-GCC	fig|6666666.229914.rna.72
tRNAs	tRNA-Leu-CAA	fig|6666666.229914.rna.61
tRNAs	tRNA-Leu-CAG	fig|6666666.229914.rna.29
tRNAs	tRNA-Leu-GAG	fig|6666666.229914.rna.30
tRNAs	tRNA-Phe-GAA	fig|6666666.229914.rna.24
tRNAs	tRNA-Ser-GGA	fig|6666666.229914.rna.1
tRNAs	tRNA-Trp-CCA	fig|6666666.229914.rna.65
tRNAs	tRNA-Val-GAC	fig|6666666.229914.rna.62
