16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229915.peg.1339
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229915.peg.1340
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.229915.peg.1342
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229915.peg.842
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229915.peg.1341
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229915.peg.354
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229915.peg.754
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229915.peg.1829
2-phosphoglycolate_salvage	Putative phosphatase YqaB	fig|6666666.229915.peg.23
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229915.peg.427
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229915.peg.713
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229915.peg.1313
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229915.peg.1937
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.229915.peg.819
5-FCL-like_protein	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229915.peg.382
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229915.peg.381
5-FCL-like_protein	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.229915.peg.338
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229915.peg.1509
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229915.peg.578
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229915.peg.383
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229915.peg.1914
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229915.peg.1306
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229915.peg.1557
ABC_transporter_of_unknown_substrate_X	Possible ABC transporter, periplasmic substrate X binding protein precursor	fig|6666666.229915.peg.1759
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, ATP-binding subunit	fig|6666666.229915.peg.1756
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, permease subunit I	fig|6666666.229915.peg.1757
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, permease subunit II	fig|6666666.229915.peg.1758
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229915.peg.1539
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229915.peg.1864
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229915.peg.1859
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229915.peg.1860
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229915.peg.1862
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229915.peg.1861
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.229915.peg.1144
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229915.peg.1971
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.229915.peg.2179
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229915.peg.1146
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229915.peg.1145
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229915.peg.1970
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	FIG138056: a glutathione-dependent thiol reductase	fig|6666666.229915.peg.1324
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229915.peg.1323
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229915.peg.120
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229915.peg.1050
A_conserved_operon_linked_to_TyrR_and_possibly_involved_in_virulence	Conserved protein YcjX with nucleoside triphosphate hydrolase domain	fig|6666666.229915.peg.1516
A_conserved_operon_linked_to_TyrR_and_possibly_involved_in_virulence	Membrane protein YcjF	fig|6666666.229915.peg.1517
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.229915.peg.762
Acyl-CoA_thioesterase_II	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.229915.peg.2069
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229915.peg.437
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229915.peg.43
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229915.peg.437
Alanine_biosynthesis	Alanine racemase, biosynthetic (EC 5.1.1.1)	fig|6666666.229915.peg.1551
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229915.peg.411
Alanine_biosynthesis	Chaperone protein HscA	fig|6666666.229915.peg.1247
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229915.peg.1243
Alanine_biosynthesis	Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA	fig|6666666.229915.peg.2089
Alanine_biosynthesis	Ferredoxin, 2Fe-2S	fig|6666666.229915.peg.1248
Alanine_biosynthesis	HTH-type transcriptional regulator IlvY	fig|6666666.229915.peg.1676
Alanine_biosynthesis	Iron binding protein IscA for iron-sulfur cluster assembly	fig|6666666.229915.peg.1245
Alanine_biosynthesis	Iron-sulfur cluster assembly scaffold protein IscU	fig|6666666.229915.peg.1244
Alanine_biosynthesis	Iron-sulfur cluster regulator IscR	fig|6666666.229915.peg.1242
Alkylphosphonate_utilization	Alkylphosphonate utilization operon protein PhnA	fig|6666666.229915.peg.190
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229915.peg.1528
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229915.peg.1580
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229915.peg.424
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.229915.peg.228
Aminopeptidases_(EC_3.4.11.-)	Peptidase B (EC 3.4.11.23)	fig|6666666.229915.peg.1257
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229915.peg.716
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229915.peg.1955
Ammonia_assimilation	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.229915.peg.1788
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229915.peg.111
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.229915.peg.810
Ammonia_assimilation	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.229915.peg.1845
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229915.peg.1647
Anaerobic_respiratory_reductases	Fe-S-cluster-containing hydrogenase components 1	fig|6666666.229915.peg.263
Anaerobic_respiratory_reductases	Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)	fig|6666666.229915.peg.1996
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229915.peg.181
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229915.peg.1876
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229915.peg.181
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229915.peg.1876
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229915.peg.408
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.229915.peg.868
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.229915.peg.1783
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229915.peg.1323
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229915.peg.1640
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229915.peg.408
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.229915.peg.868
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.229915.peg.1783
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229915.peg.1323
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229915.peg.1640
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229915.peg.408
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.229915.peg.1638
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229915.peg.1639
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229915.peg.1640
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, ATP-binding protein ArtP	fig|6666666.229915.peg.1347
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, periplasmic arginine-binding protein ArtI	fig|6666666.229915.peg.1346
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, permease protein ArtM	fig|6666666.229915.peg.1344
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, permease protein ArtQ	fig|6666666.229915.peg.1345
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229915.peg.408
Arginine_and_Ornithine_Degradation	Arginine/ornithine antiporter ArcD	fig|6666666.229915.peg.1638
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229915.peg.1639
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229915.peg.866
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229915.peg.1640
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229915.peg.1044
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229915.peg.1647
Arsenic_resistance	Arsenic efflux pump protein	fig|6666666.229915.peg.418
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component	fig|6666666.229915.peg.287
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	fig|6666666.229915.peg.285
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	fig|6666666.229915.peg.286
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD	fig|6666666.229915.peg.284
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	fig|6666666.229915.peg.283
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	fig|6666666.229915.peg.1760
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)	fig|6666666.229915.peg.282
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)	fig|6666666.229915.peg.289
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) modifying protein LsrG	fig|6666666.229915.peg.281
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	LsrR, transcriptional repressor of lsr operon	fig|6666666.229915.peg.288
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229915.peg.26
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229915.peg.258
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229915.peg.261
Auxin_biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229915.peg.277
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229915.peg.276
Bacterial_Cell_Division	Cell division protein BolA	fig|6666666.229915.peg.1476
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229915.peg.752
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229915.peg.1329
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229915.peg.336
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229915.peg.1339
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229915.peg.1980
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229915.peg.1340
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229915.peg.1330
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229915.peg.1334
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229915.peg.756
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229915.peg.1834
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229915.peg.1835
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229915.peg.1328
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229915.peg.1947
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.229915.peg.1342
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.229915.peg.755
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229915.peg.1053
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229915.peg.1162
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229915.peg.1220
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229915.peg.1018
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229915.peg.723
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229915.peg.722
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229915.peg.721
Bacterial_Cell_Division	Septum site-determining protein MinC	fig|6666666.229915.peg.1141
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229915.peg.50
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229915.peg.113
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229915.peg.1341
Bacterial_Chemotaxis	Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)	fig|6666666.229915.peg.1276
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229915.peg.1580
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229915.peg.752
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229915.peg.1329
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229915.peg.1339
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229915.peg.1980
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229915.peg.1340
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229915.peg.1330
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229915.peg.1334
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229915.peg.1328
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229915.peg.1947
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.229915.peg.1342
Bacterial_Cytoskeleton	Cell division protein ZipA	fig|6666666.229915.peg.163
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229915.peg.1162
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229915.peg.723
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229915.peg.722
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229915.peg.721
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229915.peg.843
Bacterial_Cytoskeleton	Septum site-determining protein MinC	fig|6666666.229915.peg.1141
Bacterial_Cytoskeleton	Z-ring-associated protein ZapA	fig|6666666.229915.peg.714
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229915.peg.1980
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229915.peg.1897
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ferric uptake regulation protein FUR	fig|6666666.229915.peg.2141
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229915.peg.1
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229915.peg.927
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229915.peg.1910
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229915.peg.4
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229915.peg.2076
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229915.peg.157
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229915.peg.50
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229915.peg.113
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229915.peg.641
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229915.peg.673
Beta-lactamase	Negative regulator of beta-lactamase expression	fig|6666666.229915.peg.2244
Biofilm_Adhesin_Biosynthesis	Biofilm PGA outer membrane secretin PgaA	fig|6666666.229915.peg.42
Biofilm_Adhesin_Biosynthesis	Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-)	fig|6666666.229915.peg.40
Biofilm_Adhesin_Biosynthesis	Biofilm PGA synthesis deacetylase PgaB (EC 3.-)	fig|6666666.229915.peg.41
Biogenesis_of_c-type_cytochromes	ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA	fig|6666666.229915.peg.987
Biogenesis_of_c-type_cytochromes	ABC transporter involved in cytochrome c biogenesis, CcmB subunit	fig|6666666.229915.peg.988
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmF	fig|6666666.229915.peg.992
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmH	fig|6666666.229915.peg.995
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmL	fig|6666666.229915.peg.994
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE	fig|6666666.229915.peg.989
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE	fig|6666666.229915.peg.990
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmE, heme chaperone	fig|6666666.229915.peg.991
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase	fig|6666666.229915.peg.993
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.229915.peg.1854
Biogenesis_of_c-type_cytochromes	Periplasmic thiol:disulfide interchange protein DsbA	fig|6666666.229915.peg.794
Biogenesis_of_c-type_cytochromes	Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation	fig|6666666.229915.peg.975
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.229915.peg.650
Biogenesis_of_cytochrome_c_oxidases	Ferredoxin--NADP(+) reductase (EC 1.18.1.2)	fig|6666666.229915.peg.345
Biogenesis_of_cytochrome_c_oxidases	Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly	fig|6666666.229915.peg.1393
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.229915.peg.1803
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.229915.peg.828
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229915.peg.569
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229915.peg.290
Biotin_biosynthesis_Experimental	NfuA Fe-S protein maturation	fig|6666666.229915.peg.568
Biphenyl_Degradation	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229915.peg.1937
Broadly_distributed_proteins_not_in_subsystems	FIG001943: hypothetical protein YajQ	fig|6666666.229915.peg.1064
Broadly_distributed_proteins_not_in_subsystems	FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster	fig|6666666.229915.peg.1763
Broadly_distributed_proteins_not_in_subsystems	UPF0225 protein YchJ	fig|6666666.229915.peg.1443
Broadly_distributed_proteins_not_in_subsystems	UPF0265 protein YeeX	fig|6666666.229915.peg.1965
Broadly_distributed_proteins_not_in_subsystems	YciL protein	fig|6666666.229915.peg.1292
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.229915.peg.981
Broadly_distributed_proteins_not_in_subsystems	YrbA protein	fig|6666666.229915.peg.102
CBSS-12149.1.peg.3301	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229915.peg.103
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, ATP-binding protein YrbF	fig|6666666.229915.peg.97
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, auxiliary component YrbC	fig|6666666.229915.peg.100
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, periplasmic component YrbD	fig|6666666.229915.peg.99
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, permease component YrbE	fig|6666666.229915.peg.98
CBSS-12149.1.peg.3301	Uncharacterized protein YrbB	fig|6666666.229915.peg.101
CBSS-12149.1.peg.3301	YrbA protein	fig|6666666.229915.peg.102
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229915.peg.1740
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229915.peg.1736
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229915.peg.2247
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229915.peg.1741
CBSS-160492.1.peg.550	21 kDa hemolysin precursor	fig|6666666.229915.peg.359
CBSS-160492.1.peg.550	LppC putative lipoprotein	fig|6666666.229915.peg.355
CBSS-160492.1.peg.550	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229915.peg.358
CBSS-160492.1.peg.550	Predicted endonuclease distantly related to archaeal Holliday junction resolvase	fig|6666666.229915.peg.356
CBSS-160492.1.peg.550	Predicted endonuclease distantly related to archaeal Holliday junction resolvase	fig|6666666.229915.peg.357
CBSS-160492.1.peg.550	rRNA small subunit methyltransferase I	fig|6666666.229915.peg.354
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229915.peg.1871
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229915.peg.1875
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229915.peg.1874
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.229915.peg.1496
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.229915.peg.84
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.229915.peg.1498
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.229915.peg.83
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.229915.peg.1018
CBSS-176299.4.peg.1292	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.229915.peg.83
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229915.peg.1019
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229915.peg.1020
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.229915.peg.1846
CBSS-196164.1.peg.461	Hypothetical, related to broad specificity phosphatases COG0406	fig|6666666.229915.peg.185
CBSS-208964.1.peg.3826	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229915.peg.424
CBSS-208964.1.peg.3826	DNA polymerase III chi subunit (EC 2.7.7.7)	fig|6666666.229915.peg.462
CBSS-208964.1.peg.3826	FIG000906: Predicted Permease	fig|6666666.229915.peg.426
CBSS-208964.1.peg.3826	FIG000988: Predicted permease	fig|6666666.229915.peg.425
CBSS-208964.1.peg.3826	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229915.peg.458
CBSS-208964.1.peg.3988	DNA polymerase III delta subunit (EC 2.7.7.7)	fig|6666666.229915.peg.662
CBSS-208964.1.peg.3988	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229915.peg.661
CBSS-208964.1.peg.3988	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229915.peg.659
CBSS-211586.1.peg.1979	FIG001881: hydrolase of alkaline phosphatase superfamily	fig|6666666.229915.peg.1452
CBSS-211586.1.peg.1979	FIG002927: hypothetical protein	fig|6666666.229915.peg.1451
CBSS-211586.1.peg.1979	Nucleoid-associated protein NdpA	fig|6666666.229915.peg.1450
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229915.peg.1941
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229915.peg.1940
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229915.peg.1939
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229915.peg.1946
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229915.peg.1943
CBSS-211586.9.peg.2729	Acyl-CoA thioesterase YciA, involved in membrane biogenesis	fig|6666666.229915.peg.1291
CBSS-211586.9.peg.2729	Intracellular septation protein IspA	fig|6666666.229915.peg.1290
CBSS-211586.9.peg.2729	YciL protein	fig|6666666.229915.peg.1292
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229915.peg.1321
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.229
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.554
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.555
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.972
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.229915.peg.123
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229915.peg.569
CBSS-216591.1.peg.168	Histone acetyltransferase HPA2 and related acetyltransferases	fig|6666666.229915.peg.898
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229915.peg.1146
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229915.peg.1145
CBSS-221988.1.peg.1679	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229915.peg.902
CBSS-221988.1.peg.1679	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229915.peg.904
CBSS-221988.1.peg.1679	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229915.peg.905
CBSS-221988.1.peg.1679	FIG003021: Membrane protein	fig|6666666.229915.peg.909
CBSS-221988.1.peg.1679	Pantothenate:Na+ symporter (TC 2.A.21.1.1)	fig|6666666.229915.peg.910
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229915.peg.1604
CBSS-224911.1.peg.435	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229915.peg.890
CBSS-224911.1.peg.435	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229915.peg.69
CBSS-224911.1.peg.435	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229915.peg.70
CBSS-228400.4.peg.1623	FIG001587: exported protein	fig|6666666.229915.peg.2020
CBSS-228400.4.peg.1623	Hypothetical metal-binding enzyme, YcbL homolog	fig|6666666.229915.peg.2019
CBSS-228400.4.peg.1623	L,D-transpeptidase YcbB	fig|6666666.229915.peg.2021
CBSS-228410.1.peg.134	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.229915.peg.1960
CBSS-228410.1.peg.134	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229915.peg.2177
CBSS-228410.1.peg.134	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229915.peg.2178
CBSS-228410.1.peg.134	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229915.peg.1961
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229915.peg.1402
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229915.peg.1407
CBSS-243265.1.peg.198	Transcription elongation factor GreB	fig|6666666.229915.peg.1408
CBSS-243277.1.peg.4359	Protein YcgL	fig|6666666.229915.peg.1142
CBSS-243277.1.peg.4359	YcgN (Fragment)	fig|6666666.229915.peg.199
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229915.peg.834
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229915.peg.1773
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.229915.peg.1815
CBSS-262728.1.peg.1737	Aspartate--ammonia ligase (EC 6.3.1.1)	fig|6666666.229915.peg.1643
CBSS-262728.1.peg.1737	Regulatory protein AsnC	fig|6666666.229915.peg.1644
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229915.peg.49
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229915.peg.742
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229915.peg.124
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229915.peg.49
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229915.peg.742
CBSS-269801.1.peg.2186	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	fig|6666666.229915.peg.315
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229915.peg.224
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229915.peg.729
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229915.peg.1226
CBSS-290633.1.peg.1906	Mlr7403 protein	fig|6666666.229915.peg.957
CBSS-291331.3.peg.3674	FIG026291: Hypothetical periplasmic protein	fig|6666666.229915.peg.464
CBSS-292415.3.peg.2341	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229915.peg.2178
CBSS-296591.1.peg.2330	Nucleoside-diphosphate-sugar epimerases	fig|6666666.229915.peg.1784
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229915.peg.2185
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229915.peg.2044
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229915.peg.2060
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229915.peg.1844
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229915.peg.1493
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229915.peg.1494
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229915.peg.1692
CBSS-312309.3.peg.1965	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.229915.peg.1845
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229915.peg.1647
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229915.peg.1850
CBSS-316057.3.peg.1308	DNA-directed RNA polymerase specialized sigma subunit, sigma24-like	fig|6666666.229915.peg.1410
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.229915.peg.1788
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229915.peg.114
CBSS-316275.9.peg.382	FIG001826: putative inner membrane protein	fig|6666666.229915.peg.820
CBSS-316275.9.peg.382	FIG023911: putative membrane protein	fig|6666666.229915.peg.821
CBSS-316407.3.peg.1371	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229915.peg.1161
CBSS-316407.3.peg.1371	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229915.peg.1707
CBSS-316407.3.peg.1371	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229915.peg.1697
CBSS-316407.3.peg.1371	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229915.peg.1709
CBSS-316407.3.peg.1371	Putative lipase in cluster with Phosphatidate cytidylyltransferase	fig|6666666.229915.peg.825
CBSS-316407.3.peg.1371	Ser/Thr and Tyr protein phosphatase (dual specificity)	fig|6666666.229915.peg.826
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229915.peg.437
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229915.peg.437
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.229915.peg.811
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.229915.peg.85
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.229915.peg.1490
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229915.peg.1391
CBSS-323850.3.peg.3269	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229915.peg.579
CBSS-323850.3.peg.3269	Tyrosine recombinase XerC	fig|6666666.229915.peg.580
CBSS-326442.4.peg.1852	ABC-type polar amino acid transport system, ATPase component	fig|6666666.229915.peg.506
CBSS-326442.4.peg.1852	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229915.peg.1453
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.229915.peg.1389
CBSS-326442.4.peg.1852	Putative TEGT family carrier/transport protein	fig|6666666.229915.peg.2114
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229915.peg.1985
CBSS-326442.4.peg.1852	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229915.peg.2113
CBSS-326442.4.peg.1852	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229915.peg.508
CBSS-326442.4.peg.1852	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229915.peg.509
CBSS-326442.4.peg.1852	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229915.peg.246
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229915.peg.1298
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229915.peg.899
CBSS-339671.5.peg.589	Cell division protein BolA	fig|6666666.229915.peg.1476
CBSS-339671.5.peg.589	Hypothetical lipoprotein YajG precursor	fig|6666666.229915.peg.1477
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.229915.peg.1960
CBSS-342610.3.peg.1536	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229915.peg.2177
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229915.peg.2178
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229915.peg.1961
CBSS-342610.3.peg.1794	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.229915.peg.1320
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229915.peg.1321
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229915.peg.2163
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229915.peg.154
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229915.peg.879
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229915.peg.153
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229915.peg.1220
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229915.peg.722
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229915.peg.721
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229915.peg.481
CBSS-354.1.peg.876	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229915.peg.648
CBSS-354.1.peg.876	FIG002903: a protein of unknown function perhaps involved in purine metabolism	fig|6666666.229915.peg.649
CBSS-354.1.peg.876	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229915.peg.1282
CBSS-364106.7.peg.3204	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229915.peg.890
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229915.peg.1056
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229915.peg.2031
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229915.peg.162
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229915.peg.108
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229915.peg.1611
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229915.peg.812
CBSS-498211.3.peg.1415	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229915.peg.959
CBSS-498211.3.peg.1415	FIG021952: putative membrane protein	fig|6666666.229915.peg.960
CBSS-498211.3.peg.1415	GTP-binding protein EngA	fig|6666666.229915.peg.1226
CBSS-498211.3.peg.1415	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229915.peg.958
CBSS-498211.3.peg.1415	Mlr7403 protein	fig|6666666.229915.peg.957
CBSS-498211.3.peg.1415	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229915.peg.1256
CBSS-498211.3.peg.1415	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229915.peg.16
CBSS-498211.3.peg.1415	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229915.peg.861
CBSS-498211.3.peg.1415	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229915.peg.962
CBSS-498211.3.peg.1415	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229915.peg.1127
CBSS-498211.3.peg.1415	Type IV pilus biogenesis protein PilF	fig|6666666.229915.peg.961
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.639
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.817
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.1261
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229915.peg.1353
CBSS-584.1.peg.1352	FIG009095: D,D-carboxypeptidase family protein	fig|6666666.229915.peg.1322
CBSS-584.1.peg.1352	FIG138056: a glutathione-dependent thiol reductase	fig|6666666.229915.peg.1324
CBSS-584.1.peg.1352	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229915.peg.1323
CBSS-584.1.peg.3382	33 kDa chaperonin (Heat shock protein 33) (HSP33)	fig|6666666.229915.peg.614
CBSS-584.1.peg.3382	FIG001957: putative hydrolase	fig|6666666.229915.peg.612
CBSS-584.1.peg.3382	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229915.peg.1422
CBSS-584.1.peg.3382	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229915.peg.613
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229915.peg.120
CBSS-630.2.peg.3360	Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock)	fig|6666666.229915.peg.706
CBSS-630.2.peg.3360	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229915.peg.1050
CBSS-630.2.peg.3360	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229915.peg.136
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229915.peg.1695
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229915.peg.959
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229915.peg.1339
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229915.peg.842
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229915.peg.1696
CBSS-83333.1.peg.2911	FIG002060: uncharacterized protein YggL	fig|6666666.229915.peg.1482
CBSS-83333.1.peg.2911	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229915.peg.1481
CBSS-83333.1.peg.876	Cell division protein FtsK	fig|6666666.229915.peg.1980
CBSS-83333.1.peg.876	FIG065221: Holliday junction DNA helicase	fig|6666666.229915.peg.1982
CBSS-83333.1.peg.876	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229915.peg.1981
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.229915.peg.407
CBSS-83333.1.peg.946	DNA transformation protein TfoX	fig|6666666.229915.peg.1669
CBSS-83333.1.peg.946	Inner membrane protein YccF	fig|6666666.229915.peg.2105
CBSS-83333.1.peg.946	Methylglyoxal synthase (EC 4.2.3.3)	fig|6666666.229915.peg.2106
CBSS-83333.1.peg.946	Putative efflux (PET) family inner membrane protein YccS	fig|6666666.229915.peg.2104
CBSS-83333.1.peg.946	UPF0319 protein YccT precursor	fig|6666666.229915.peg.2107
CBSS-87626.3.peg.3639	FIG001590: Putative conserved exported protein precursor	fig|6666666.229915.peg.715
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229915.peg.716
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229915.peg.2
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229915.peg.1
CO2_uptake,_carboxysome	RuBisCO operon transcriptional regulator	fig|6666666.229915.peg.1403
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.229915.peg.2115
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229915.peg.1793
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229915.peg.1795
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229915.peg.1796
CRISPRs	CRISPR-associated protein Cas3''	fig|6666666.229915.peg.1789
CRISPRs	CRISPR-associated protein, Cas5d family	fig|6666666.229915.peg.1790
CRISPRs	CRISPR-associated protein, Cas5d family	fig|6666666.229915.peg.2121
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229915.peg.1791
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229915.peg.2122
CRISPRs	CRISPR-associated protein, Csd2 family	fig|6666666.229915.peg.2123
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229915.peg.566
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229915.peg.1015
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229915.peg.1231
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229915.peg.1232
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229915.peg.1483
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229915.peg.1574
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229915.peg.333
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229915.peg.1233
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229915.peg.1484
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229915.peg.1575
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229915.peg.638
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229915.peg.636
Campylobacter_Iron_Metabolism	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229915.peg.1838
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.229915.peg.705
Campylobacter_Iron_Metabolism	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229915.peg.1837
Capsular_heptose_biosynthesis	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229915.peg.358
Capsular_heptose_biosynthesis	Phosphoheptose isomerase 1 (EC 5.3.1.-)	fig|6666666.229915.peg.1348
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229915.peg.2047
Carbon_Starvation	Carbon starvation protein A	fig|6666666.229915.peg.1343
Carbon_Starvation	Carbon storage regulator	fig|6666666.229915.peg.1457
Carbon_Starvation	Starvation lipoprotein Slp paralog	fig|6666666.229915.peg.2077
Carbon_Starvation	Stringent starvation protein A	fig|6666666.229915.peg.295
Carbon_Starvation	Stringent starvation protein B	fig|6666666.229915.peg.294
Carbon_storage_regulator	Carbon storage regulator	fig|6666666.229915.peg.1457
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.229915.peg.186
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229915.peg.181
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229915.peg.1876
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229915.peg.955
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229915.peg.1011
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229915.peg.1162
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229915.peg.2140
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229915.peg.1395
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229915.peg.1010
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229915.peg.1009
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229915.peg.1017
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229915.peg.1015
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229915.peg.1012
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229915.peg.1014
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229915.peg.1013
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229915.peg.532
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229915.peg.528
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229915.peg.752
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229915.peg.336
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229915.peg.930
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229915.peg.170
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229915.peg.613
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229915.peg.2133
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229915.peg.1402
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229915.peg.1407
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229915.peg.1349
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229915.peg.2188
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229915.peg.1255
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229915.peg.1812
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.229915.peg.1813
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family	fig|6666666.229915.peg.2180
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229915.peg.1804
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229915.peg.2176
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229915.peg.1804
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229915.peg.2176
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229915.peg.1804
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229915.peg.2176
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)	fig|6666666.229915.peg.119
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.229915.peg.117
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229915.peg.1540
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229915.peg.258
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.229915.peg.256
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.229915.peg.255
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229915.peg.261
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229915.peg.1542
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229915.peg.1541
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229915.peg.261
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229915.peg.277
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229915.peg.276
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229915.peg.1548
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229915.peg.902
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229915.peg.672
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229915.peg.1962
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229915.peg.377
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229915.peg.378
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229915.peg.1326
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229915.peg.2147
Chorismate_Synthesis	Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229915.peg.377
Chorismate_Synthesis	Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229915.peg.378
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.229915.peg.1326
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229915.peg.1678
Chorismate_Synthesis	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.229915.peg.428
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229915.peg.673
Cinnamic_Acid_Degradation	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229915.peg.1937
Cinnamic_Acid_Degradation	Probable 3-phenylpropionic acid transporter	fig|6666666.229915.peg.1051
Citrate_Metabolism,_Transport,_and_Regulation	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25)	fig|6666666.229915.peg.1269
Citrate_Metabolism,_Transport,_and_Regulation	C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)	fig|6666666.229915.peg.1733
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase alpha chain (EC 4.1.3.6)	fig|6666666.229915.peg.1268
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.229915.peg.1267
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	fig|6666666.229915.peg.1266
Citrate_Metabolism,_Transport,_and_Regulation	[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	fig|6666666.229915.peg.1263
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.229915.peg.616
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.229915.peg.618
Cluster_Ytf_and_putative_sugar_transporter	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229915.peg.1070
Cluster_Ytf_and_putative_sugar_transporter	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229915.peg.361
Cluster_Ytf_and_putative_sugar_transporter	Uncharacterized protein YtfM precursor	fig|6666666.229915.peg.1419
Cluster_Ytf_and_putative_sugar_transporter	Uncharacterized protein YtfN	fig|6666666.229915.peg.1420
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229915.peg.1456
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229915.peg.811
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.229915.peg.1463
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229915.peg.1678
Cluster_containing_Glutathione_synthetase	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229915.peg.236
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.229915.peg.1463
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229915.peg.1461
Cluster_containing_Glutathione_synthetase	UPF0301 protein YqgE	fig|6666666.229915.peg.1462
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229915.peg.1027
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229915.peg.701
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229915.peg.702
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229915.peg.645
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229915.peg.920
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.229915.peg.1674
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.229915.peg.1675
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.229915.peg.1396
Coenzyme_A_Biosynthesis	Pantothenate:Na+ symporter (TC 2.A.21.1.1)	fig|6666666.229915.peg.910
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229915.peg.742
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.229915.peg.686
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.229915.peg.686
Coenzyme_B12_biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229915.peg.1414
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229915.peg.235
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229915.peg.241
Coenzyme_F420_hydrogenase	Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.229915.peg.2009
Coenzyme_F420_hydrogenase	Hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.229915.peg.266
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.229
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.554
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.555
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.972
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.229915.peg.885
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspD	fig|6666666.229915.peg.322
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229915.peg.1548
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229915.peg.902
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229915.peg.672
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229915.peg.1962
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229915.peg.2147
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229915.peg.1678
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.229915.peg.428
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229915.peg.673
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Transcriptional repressor protein TrpR	fig|6666666.229915.peg.1294
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Transcriptional repressor protein TyrR	fig|6666666.229915.peg.1518
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229915.peg.1897
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229915.peg.224
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229915.peg.699
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229915.peg.2
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229915.peg.1
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229915.peg.1705
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229915.peg.16
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229915.peg.861
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229915.peg.962
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229915.peg.1127
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229915.peg.1910
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229915.peg.753
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229915.peg.729
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Similar to C-terminal Zn-finger domain of DNA topoisomerase I	fig|6666666.229915.peg.1680
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229915.peg.4
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229915.peg.2076
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229915.peg.157
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229915.peg.849
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229915.peg.522
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229915.peg.400
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229915.peg.944
Copper_homeostasis	Copper chaperone	fig|6666666.229915.peg.943
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229915.peg.944
Copper_homeostasis	Cu(I)-responsive transcriptional regulator	fig|6666666.229915.peg.942
Copper_homeostasis	Cytochrome c heme lyase subunit CcmF	fig|6666666.229915.peg.992
Copper_homeostasis	Cytochrome c heme lyase subunit CcmH	fig|6666666.229915.peg.995
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.229915.peg.1260
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.639
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.817
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.1261
Creatine_and_Creatinine_Degradation	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229915.peg.1453
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.229915.peg.360
Cysteine_Biosynthesis	Cys regulon transcriptional activator CysB	fig|6666666.229915.peg.374
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.229915.peg.165
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229915.peg.522
Cysteine_Biosynthesis	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.229915.peg.1576
Cysteine_Biosynthesis	Sulfate transporter, CysZ-type	fig|6666666.229915.peg.164
CytR_regulation	Cyclic AMP receptor protein	fig|6666666.229915.peg.682
Cytolethal_distending_toxin_of_Campylobacter_jejuni	Cytolethal distending toxin subunit A	fig|6666666.229915.peg.1214
Cytolethal_distending_toxin_of_Campylobacter_jejuni	Cytolethal distending toxin subunit B	fig|6666666.229915.peg.1213
Cytolethal_distending_toxin_of_Campylobacter_jejuni	Cytolethal distending toxin subunit C	fig|6666666.229915.peg.1212
Cytolethal_distending_toxins	Cytolethal distending toxin subunit A	fig|6666666.229915.peg.1214
Cytolethal_distending_toxins	Cytolethal distending toxin subunit B	fig|6666666.229915.peg.1213
Cytolethal_distending_toxins	Cytolethal distending toxin subunit C	fig|6666666.229915.peg.1212
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229915.peg.143
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229915.peg.140
D-Galacturonate_and_D-Glucuronate_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.229915.peg.146
D-Galacturonate_and_D-Glucuronate_Utilization	D-mannonate oxidoreductase (EC 1.1.1.57)	fig|6666666.229915.peg.142
D-Galacturonate_and_D-Glucuronate_Utilization	Hexuronate utilization operon transcriptional repressor ExuR	fig|6666666.229915.peg.147
D-Galacturonate_and_D-Glucuronate_Utilization	Mannonate dehydratase (EC 4.2.1.8)	fig|6666666.229915.peg.148
D-Galacturonate_and_D-Glucuronate_Utilization	Uronate isomerase (EC 5.3.1.12)	fig|6666666.229915.peg.141
D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization	Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	fig|6666666.229915.peg.646
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229915.peg.1028
D-Tagatose_and_Galactitol_Utilization	Galactitol utilization operon repressor	fig|6666666.229915.peg.179
D-Tagatose_and_Galactitol_Utilization	Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)	fig|6666666.229915.peg.178
D-Tagatose_and_Galactitol_Utilization	PTS system, galactitol-specific IIA component (EC 2.7.1.69)	fig|6666666.229915.peg.175
D-Tagatose_and_Galactitol_Utilization	PTS system, galactitol-specific IIB component (EC 2.7.1.69)	fig|6666666.229915.peg.176
D-Tagatose_and_Galactitol_Utilization	PTS system, galactitol-specific IIC component (EC 2.7.1.69)	fig|6666666.229915.peg.177
D-Tagatose_and_Galactitol_Utilization	Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144)	fig|6666666.229915.peg.174
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229915.peg.1528
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229915.peg.1528
D-gluconate_and_ketogluconates_metabolism	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229915.peg.143
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.229915.peg.601
D-gluconate_and_ketogluconates_metabolism	Gluconate utilization system Gnt-I transcriptional repressor	fig|6666666.229915.peg.1992
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.229915.peg.2028
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.229915.peg.804
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.229915.peg.2029
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.229915.peg.886
D-ribose_utilization	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229915.peg.137
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229915.peg.1399
D-ribose_utilization	Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)	fig|6666666.229915.peg.888
D-ribose_utilization	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	fig|6666666.229915.peg.1398
D-ribose_utilization	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	fig|6666666.229915.peg.1400
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229915.peg.162
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229915.peg.18
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.229915.peg.1389
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229915.peg.400
DNA_Repair_Base_Excision	Exodeoxyribonuclease I (EC 3.1.11.1)	fig|6666666.229915.peg.217
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.229915.peg.691
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229915.peg.439
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.229915.peg.1024
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229915.peg.2140
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229915.peg.1395
DNA_ligases	DNA ligase (ATP) (EC 6.5.1.1)	fig|6666666.229915.peg.2032
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229915.peg.2152
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229915.peg.2153
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229915.peg.1176
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229915.peg.1299
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.229915.peg.1301
DNA_processing_cluster	Protein involved in catabolism of external DNA	fig|6666666.229915.peg.680
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229915.peg.1300
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229915.peg.669
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229915.peg.2168
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229915.peg.1761
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.229915.peg.1480
DNA_repair,_bacterial	DNA mismatch repair endonuclease MutH	fig|6666666.229915.peg.109
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229915.peg.1136
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.229915.peg.1682
DNA_repair,_bacterial	DNA recombination-dependent growth factor C	fig|6666666.229915.peg.1049
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229915.peg.1978
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229915.peg.688
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229915.peg.1287
DNA_repair,_bacterial	DNA-cytosine methyltransferase (EC 2.1.1.37)	fig|6666666.229915.peg.457
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229915.peg.1731
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.229915.peg.2058
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229915.peg.91
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229915.peg.182
DNA_repair,_bacterial	Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	fig|6666666.229915.peg.671
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229915.peg.108
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.229915.peg.735
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229915.peg.670
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229915.peg.1169
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229915.peg.2075
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229915.peg.1522
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229915.peg.799
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	fig|6666666.229915.peg.315
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V beta chain (EC 3.1.11.5)	fig|6666666.229915.peg.316
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)	fig|6666666.229915.peg.1909
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229915.peg.1394
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229915.peg.1009
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229915.peg.1496
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229915.peg.1300
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229915.peg.670
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229915.peg.1169
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229915.peg.439
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.229915.peg.735
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase Rep	fig|6666666.229915.peg.21
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229915.peg.2031
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229915.peg.1705
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229915.peg.955
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229915.peg.1011
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229915.peg.2140
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229915.peg.1395
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229915.peg.1010
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229915.peg.1009
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229915.peg.613
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.229915.peg.667
DNA_structural_proteins,_bacterial	Chromosome partition protein MukB	fig|6666666.229915.peg.215
DNA_structural_proteins,_bacterial	Chromosome partition protein MukE	fig|6666666.229915.peg.214
DNA_structural_proteins,_bacterial	Chromosome partition protein MukF	fig|6666666.229915.peg.212
DNA_structural_proteins,_bacterial	DNA-binding protein Fis	fig|6666666.229915.peg.914
DNA_structural_proteins,_bacterial	DNA-binding protein HU-alpha	fig|6666666.229915.peg.1427
DNA_structural_proteins,_bacterial	Integration host factor alpha subunit	fig|6666666.229915.peg.248
DNA_structural_proteins,_bacterial	Integration host factor beta subunit	fig|6666666.229915.peg.2134
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229915.peg.224
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229915.peg.1176
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229915.peg.1299
DNA_topoisomerases,_Type_I,_ATP-independent	Similar to C-terminal Zn-finger domain of DNA topoisomerase I	fig|6666666.229915.peg.1680
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229915.peg.2140
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229915.peg.1395
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229915.peg.2161
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229915.peg.2163
DNA_uptake_cluster	Competence protein A	fig|6666666.229915.peg.678
DNA_uptake_cluster	Competence protein B	fig|6666666.229915.peg.677
DNA_uptake_cluster	Competence protein C	fig|6666666.229915.peg.676
DNA_uptake_cluster	Competence protein D	fig|6666666.229915.peg.675
DNA_uptake_cluster	Competence protein E	fig|6666666.229915.peg.674
DNA_uptake_cluster	DNA-binding protein HU-alpha	fig|6666666.229915.peg.1427
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229915.peg.477
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229915.peg.679
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229915.peg.1841
DNA_uptake_cluster	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.229915.peg.1424
DNA_uptake_cluster	NfuA Fe-S protein maturation	fig|6666666.229915.peg.568
DNA_uptake_cluster	Protein involved in catabolism of external DNA	fig|6666666.229915.peg.680
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.229915.peg.227
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229915.peg.1488
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229915.peg.2137
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.229915.peg.651
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229915.peg.954
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229915.peg.651
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229915.peg.953
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.229915.peg.207
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.229915.peg.2018
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229915.peg.424
Dehydrogenase_complexes	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229915.peg.382
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.229915.peg.2017
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229915.peg.383
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose operon repressor, DeoR family	fig|6666666.229915.peg.492
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229915.peg.491
Deoxyribose_and_Deoxynucleoside_Catabolism	Na+ dependent nucleoside transporter NupC	fig|6666666.229915.peg.44
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229915.peg.43
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.229915.peg.853
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.229915.peg.886
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.229915.peg.1240
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.229915.peg.1929
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229915.peg.1385
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229915.peg.1414
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229915.peg.1314
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229915.peg.1441
ECF_class_transporters	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229915.peg.432
ECF_class_transporters	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229915.peg.434
ECF_class_transporters	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229915.peg.433
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229915.peg.143
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229915.peg.140
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.229915.peg.604
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229915.peg.1464
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.229915.peg.2028
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.229915.peg.605
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229915.peg.86
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229915.peg.769
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229915.peg.65
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229915.peg.1405
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229915.peg.280
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229915.peg.1773
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229915.peg.1772
Exopolysaccharide_Biosynthesis	Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6)	fig|6666666.229915.peg.2057
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59)	fig|6666666.229915.peg.318
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229915.peg.1702
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229915.peg.834
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)	fig|6666666.229915.peg.1281
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.229915.peg.832
Fatty_Acid_Biosynthesis_FASII	4'-phosphopantetheinyl transferase (EC 2.7.8.-)	fig|6666666.229915.peg.127
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.229915.peg.2190
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229915.peg.183
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.229915.peg.835
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229915.peg.904
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229915.peg.905
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)	fig|6666666.229915.peg.446
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.229915.peg.833
Fermentations:_Lactate	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229915.peg.1937
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229915.peg.1773
Fermentations:_Lactate	D-lactate dehydrogenase (EC 1.1.1.28)	fig|6666666.229915.peg.1849
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229915.peg.1772
Fermentations:_Mixed_acid	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229915.peg.1937
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229915.peg.1773
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229915.peg.1313
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229915.peg.1937
Fermentations:_Mixed_acid	D-lactate dehydrogenase (EC 1.1.1.28)	fig|6666666.229915.peg.1849
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.229915.peg.1033
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229915.peg.1772
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229915.peg.1023
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229915.peg.1034
Fermentations:_Mixed_acid	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	fig|6666666.229915.peg.1036
Fermentations:_Mixed_acid	Sugar/maltose fermentation stimulation protein homolog	fig|6666666.229915.peg.1748
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229915.peg.153
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229915.peg.1339
Flavodoxin	Flavodoxin 1	fig|6666666.229915.peg.2142
Flavodoxin	Flavodoxin 2	fig|6666666.229915.peg.785
Flavodoxin	Flavodoxin 2	fig|6666666.229915.peg.2084
Flavodoxin	Flavoprotein MioC	fig|6666666.229915.peg.527
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.229915.peg.785
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.229915.peg.2084
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.229915.peg.1769
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229915.peg.713
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229915.peg.1540
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.229915.peg.819
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229915.peg.184
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.229915.peg.978
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.229915.peg.1137
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229915.peg.184
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229915.peg.1598
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229915.peg.1542
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229915.peg.1541
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.229915.peg.893
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.229915.peg.1769
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229915.peg.336
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.229915.peg.978
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.229915.peg.1137
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229915.peg.1598
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229915.peg.930
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229915.peg.2188
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229915.peg.2011
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229915.peg.2012
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229915.peg.2013
Formate_dehydrogenase	Formate dehydrogenase N alpha subunit (EC 1.2.1.2)	fig|6666666.229915.peg.1994
Formate_dehydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.229915.peg.1995
Formate_hydrogenase	Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)	fig|6666666.229915.peg.1996
Formate_hydrogenase	Formate dehydrogenase N alpha subunit (EC 1.2.1.2)	fig|6666666.229915.peg.1994
Formate_hydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.229915.peg.1995
Formate_hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.229915.peg.1993
Formate_hydrogenase	Formate hydrogenlyase subunit 3	fig|6666666.229915.peg.2000
Formate_hydrogenase	Formate hydrogenlyase subunit 5	fig|6666666.229915.peg.2005
Formate_hydrogenase	Formate hydrogenlyase subunit 6	fig|6666666.229915.peg.2006
Formate_hydrogenase	Formate hydrogenlyase subunit 7	fig|6666666.229915.peg.2007
Formate_hydrogenase	Formate hydrogenlyase transcriptional activator	fig|6666666.229915.peg.2008
Formate_hydrogenase	formate dehydrogenase formation protein FdhE	fig|6666666.229915.peg.390
Fructose_utilization	1-phosphofructokinase (EC 2.7.1.56)	fig|6666666.229915.peg.789
Fructose_utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.229915.peg.1745
Fructose_utilization	Fructose repressor FruR, LacI family	fig|6666666.229915.peg.367
Fructose_utilization	Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69)	fig|6666666.229915.peg.790
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.229915.peg.790
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.229915.peg.788
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.229915.peg.788
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229915.peg.1533
Fructose_utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229915.peg.1532
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229915.peg.8
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HybG	fig|6666666.229915.peg.268
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.229915.peg.430
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.229915.peg.429
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.229915.peg.1998
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229915.peg.431
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229915.peg.468
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229915.peg.866
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.229
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.554
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.555
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.972
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229915.peg.1505
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate--ammonia ligase (EC 6.3.1.1)	fig|6666666.229915.peg.1643
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229915.peg.80
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229915.peg.1955
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229915.peg.111
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.229915.peg.963
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system	fig|6666666.229915.peg.1979
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229915.peg.866
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229915.peg.111
Glutaredoxin_3_containing_cluster	FIG136845: Rhodanese-related sulfurtransferase	fig|6666666.229915.peg.519
Glutaredoxin_3_containing_cluster	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229915.peg.521
Glutaredoxin_3_containing_cluster	Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state)	fig|6666666.229915.peg.520
Glutaredoxins	Cell wall endopeptidase, family M23/M37	fig|6666666.229915.peg.396
Glutaredoxins	Glutaredoxin 1	fig|6666666.229915.peg.467
Glutaredoxins	Glutaredoxin 2	fig|6666666.229915.peg.1219
Glutaredoxins	Glutaredoxin-related protein	fig|6666666.229915.peg.624
Glutaredoxins	Glutaredoxin-related protein	fig|6666666.229915.peg.1822
Glutaredoxins	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229915.peg.69
Glutathione-dependent_pathway_of_formaldehyde_detoxification	S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284)	fig|6666666.229915.peg.644
Glutathione-dependent_pathway_of_formaldehyde_detoxification	S-formylglutathione hydrolase (EC 3.1.2.12)	fig|6666666.229915.peg.643
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3)	fig|6666666.229915.peg.951
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229915.peg.236
Glutathione:_Non-redox_reactions	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229915.peg.2177
Glutathione:_Non-redox_reactions	Glutathione S-transferase (EC 2.5.1.18)	fig|6666666.229915.peg.2160
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229915.peg.2178
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229915.peg.1882
Glutathione:_Redox_cycle	Glutaredoxin 1	fig|6666666.229915.peg.467
Glutathione:_Redox_cycle	Glutaredoxin 2	fig|6666666.229915.peg.1219
Glutathione:_Redox_cycle	Glutathione reductase (EC 1.8.1.7)	fig|6666666.229915.peg.681
Glutathionylspermidine_and_Trypanothione	Glutathionylspermidine amidohydrolase (EC 3.5.1.78)	fig|6666666.229915.peg.1656
Glutathionylspermidine_and_Trypanothione	Glutathionylspermidine synthase (EC 6.3.1.8)	fig|6666666.229915.peg.1656
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229915.peg.1528
Glycerate_metabolism	Hydroxypyruvate isomerase (EC 5.3.1.22)	fig|6666666.229915.peg.805
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.229915.peg.1543
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229915.peg.280
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229915.peg.1039
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229915.peg.1708
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229915.peg.835
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein (ACP1)	fig|6666666.229915.peg.586
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein (ACP2)	fig|6666666.229915.peg.587
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY	fig|6666666.229915.peg.979
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229915.peg.1313
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229915.peg.1937
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229915.peg.1161
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229915.peg.1707
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8)	fig|6666666.229915.peg.773
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.229915.peg.186
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Diacylglycerol kinase (EC 2.7.1.107)	fig|6666666.229915.peg.1499
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229915.peg.1528
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)	fig|6666666.229915.peg.736
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229915.peg.353
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229915.peg.521
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphate:acyl-ACP acyltransferase PlsX	fig|6666666.229915.peg.831
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229915.peg.1697
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229915.peg.1709
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylglycerophosphatase A (EC 3.1.3.27)	fig|6666666.229915.peg.1558
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylglycerophosphatase B (EC 3.1.3.27)	fig|6666666.229915.peg.2063
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylserine decarboxylase (EC 4.1.1.65)	fig|6666666.229915.peg.824
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229915.peg.1914
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229915.peg.138
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229915.peg.1528
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.229915.peg.964
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229915.peg.1964
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229915.peg.1063
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229915.peg.1914
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.229915.peg.965
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229915.peg.1985
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229915.peg.1850
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229915.peg.2072
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229915.peg.201
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229915.peg.200
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229915.peg.1776
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229915.peg.203
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229915.peg.202
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229915.peg.205
Glycogen_metabolism	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229915.peg.204
Glycogen_metabolism	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229915.peg.1777
Glycogen_metabolism_cluster	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229915.peg.201
Glycogen_metabolism_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229915.peg.200
Glycogen_metabolism_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229915.peg.1776
Glycogen_metabolism_cluster	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229915.peg.203
Glycogen_metabolism_cluster	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229915.peg.202
Glycogen_metabolism_cluster	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229915.peg.205
Glycogen_metabolism_cluster	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229915.peg.204
Glycolate,_glyoxylate_interconversions	Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD	fig|6666666.229915.peg.1818
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.229915.peg.1543
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229915.peg.754
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229915.peg.1829
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229915.peg.1028
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229915.peg.1464
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229915.peg.525
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229915.peg.1070
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.229915.peg.768
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229915.peg.1552
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229915.peg.86
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229915.peg.769
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229915.peg.65
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229915.peg.1405
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229915.peg.280
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229915.peg.899
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229915.peg.1028
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.229915.peg.1464
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229915.peg.525
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229915.peg.1070
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229915.peg.1552
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229915.peg.769
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229915.peg.65
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229915.peg.1405
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229915.peg.280
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229915.peg.899
Glycyl-tRNA_synthetase	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229915.peg.625
Glycyl-tRNA_synthetase	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229915.peg.620
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229915.peg.1496
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229915.peg.1018
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229915.peg.625
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229915.peg.620
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.639
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.817
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.1261
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229915.peg.1353
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229915.peg.409
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229915.peg.1153
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229915.peg.1152
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229915.peg.1508
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229915.peg.1507
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229915.peg.1284
HPr_catabolite_repression_system	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229915.peg.1532
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229915.peg.1153
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229915.peg.1152
Heat_shock_dnaK_gene_cluster_extended	FIG001341: Probable Fe(2+)-trafficking protein YggX	fig|6666666.229915.peg.1479
Heat_shock_dnaK_gene_cluster_extended	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229915.peg.236
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229915.peg.1284
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229915.peg.134
Heat_shock_dnaK_gene_cluster_extended	RNA polymerase sigma factor RpoH	fig|6666666.229915.peg.1668
Heat_shock_dnaK_gene_cluster_extended	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229915.peg.136
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.229915.peg.1489
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229915.peg.1461
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.229915.peg.912
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229915.peg.613
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229915.peg.1021
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229915.peg.354
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229915.peg.1865
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229915.peg.638
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229915.peg.636
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229915.peg.1283
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229915.peg.1689
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229915.peg.1883
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229915.peg.2130
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Paraquat-inducible protein A	fig|6666666.229915.peg.2024
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Paraquat-inducible protein B	fig|6666666.229915.peg.2025
Heme_and_Siroheme_Biosynthesis	Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	fig|6666666.229915.peg.897
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.229915.peg.1816
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.229915.peg.1846
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.229915.peg.2179
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229915.peg.871
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.229915.peg.1416
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.229915.peg.619
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)	fig|6666666.229915.peg.1602
Heme_and_Siroheme_Biosynthesis	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229915.peg.136
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.229915.peg.1425
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229915.peg.1414
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.229915.peg.1415
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229915.peg.636
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229915.peg.1283
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229915.peg.1689
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229915.peg.1883
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229915.peg.2130
Hexose_Phosphate_Uptake_System	Hexose phosphate uptake regulatory protein UhpC	fig|6666666.229915.peg.37
Hfl_operon	HflC protein	fig|6666666.229915.peg.129
Hfl_operon	HflK protein	fig|6666666.229915.peg.128
Hfl_operon	RNA-binding protein Hfq	fig|6666666.229915.peg.1520
Homogentisate_pathway_of_aromatic_compound_degradation	Transcriptional regulator, IclR family	fig|6666666.229915.peg.1088
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.229915.peg.748
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229915.peg.685
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229915.peg.134
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleotidase YfbR, HD superfamily	fig|6666666.229915.peg.417
Hydrogenases	Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.229915.peg.2009
Hydrogenases	Fe-S-cluster-containing hydrogenase components 1	fig|6666666.229915.peg.263
Hydrogenases	Ni/Fe-hydrogenase 2 B-type cytochrome subunit	fig|6666666.229915.peg.264
Hydrogenases	Uptake hydrogenase large subunit (EC 1.12.99.6)	fig|6666666.229915.peg.265
Hydrogenases	Uptake hydrogenase small subunit precursor (EC 1.12.99.6)	fig|6666666.229915.peg.262
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229915.peg.1603
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229915.peg.4
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229915.peg.2012
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229915.peg.2013
Inositol_catabolism	5-deoxy-glucuronate isomerase (EC 5.3.1.-)	fig|6666666.229915.peg.1928
Inositol_catabolism	5-keto-2-deoxygluconokinase (EC 2.7.1.92)	fig|6666666.229915.peg.1925
Inositol_catabolism	Epi-inositol hydrolase (EC 3.7.1.-)	fig|6666666.229915.peg.1924
Inositol_catabolism	Inositol transport system ATP-binding protein	fig|6666666.229915.peg.1935
Inositol_catabolism	Inositol transport system ATP-binding protein	fig|6666666.229915.peg.2097
Inositol_catabolism	Inositol transport system permease protein	fig|6666666.229915.peg.1936
Inositol_catabolism	Inositol transport system sugar-binding protein	fig|6666666.229915.peg.1933
Inositol_catabolism	Inositol transport system sugar-binding protein	fig|6666666.229915.peg.1934
Inositol_catabolism	Inosose dehydratase (EC 4.2.1.44)	fig|6666666.229915.peg.1923
Inositol_catabolism	Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)	fig|6666666.229915.peg.1931
Inositol_catabolism	Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)	fig|6666666.229915.peg.1922
Inositol_catabolism	Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18)	fig|6666666.229915.peg.1932
Inositol_catabolism	Predicted transcriptional regulator of the myo-inositol catabolic operon	fig|6666666.229915.peg.1926
Inositol_catabolism	uncharacterized domain	fig|6666666.229915.peg.1925
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229915.peg.860
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229915.peg.224
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229915.peg.1429
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229915.peg.855
Inteins	Translation initiation factor 2	fig|6666666.229915.peg.1736
Inteins	Translation initiation factor 2	fig|6666666.229915.peg.2247
Intracellular_septation_in_Enterobacteria	Acyl-CoA thioesterase YciA, involved in membrane biogenesis	fig|6666666.229915.peg.1291
Intracellular_septation_in_Enterobacteria	Intracellular septation protein IspA	fig|6666666.229915.peg.1290
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, ATP-binding protein	fig|6666666.229915.peg.334
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, ATP-binding protein	fig|6666666.229915.peg.1485
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229915.peg.1231
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229915.peg.1232
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229915.peg.1483
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229915.peg.1574
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229915.peg.333
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229915.peg.1233
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229915.peg.1484
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229915.peg.1575
Iron_transport_system_including_ABC_transporter	Cytochrome C553 (soluble cytochrome f)	fig|6666666.229915.peg.1831
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, ATP-binding subunit	fig|6666666.229915.peg.1833
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, substrate binding protein	fig|6666666.229915.peg.1836
Iron_transport_system_including_ABC_transporter	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229915.peg.1838
Iron_transport_system_including_ABC_transporter	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229915.peg.1837
Iron_transport_system_including_ABC_transporter	Possible periplasmic thiredoxin	fig|6666666.229915.peg.1832
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229915.peg.411
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229915.peg.181
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229915.peg.1876
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229915.peg.1695
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229915.peg.180
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229915.peg.959
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229915.peg.750
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229915.peg.751
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229915.peg.1971
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229915.peg.1055
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229915.peg.181
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229915.peg.1876
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229915.peg.1696
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229915.peg.181
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229915.peg.1876
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229915.peg.181
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229915.peg.1876
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229915.peg.181
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229915.peg.1876
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229915.peg.181
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229915.peg.1876
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229915.peg.1696
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.229915.peg.1144
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.229915.peg.254
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.229915.peg.743
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.229915.peg.1762
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.229915.peg.1703
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.229915.peg.253
KDO2-Lipid_A_biosynthesis	DNA internalization-related competence protein ComEC/Rec2	fig|6666666.229915.peg.1766
KDO2-Lipid_A_biosynthesis	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229915.peg.661
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-)	fig|6666666.229915.peg.2150
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	fig|6666666.229915.peg.2086
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.229915.peg.1704
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.229915.peg.94
KDO2-Lipid_A_biosynthesis	LptA, protein essential for LPS transport across the periplasm	fig|6666666.229915.peg.95
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.229915.peg.1764
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.229915.peg.1040
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108)	fig|6666666.229915.peg.1327
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.229915.peg.1701
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229915.peg.718
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229915.peg.717
L-Arabinose_utilization	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)	fig|6666666.229915.peg.470
L-ascorbate_utilization_(and_related_gene_clusters)	3-keto-L-gulonate 6-phosphate decarboxylase	fig|6666666.229915.peg.476
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate utilization transcriptional regulator UlaR, HTH-type	fig|6666666.229915.peg.472
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	fig|6666666.229915.peg.475
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate-specific PTS system, EIIC component	fig|6666666.229915.peg.474
L-ascorbate_utilization_(and_related_gene_clusters)	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)	fig|6666666.229915.peg.470
L-ascorbate_utilization_(and_related_gene_clusters)	L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-)	fig|6666666.229915.peg.471
L-ascorbate_utilization_(and_related_gene_clusters)	L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-)	fig|6666666.229915.peg.1401
L-ascorbate_utilization_(and_related_gene_clusters)	Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G)	fig|6666666.229915.peg.473
L-rhamnose_utilization	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229915.peg.1968
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.229915.peg.1651
LOS_core_oligosaccharide_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.229915.peg.743
LOS_core_oligosaccharide_biosynthesis	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)	fig|6666666.229915.peg.13
LOS_core_oligosaccharide_biosynthesis	ADP-heptose synthase (EC 2.7.-.-)	fig|6666666.229915.peg.2087
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229915.peg.12
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229915.peg.740
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229915.peg.1504
LOS_core_oligosaccharide_biosynthesis	Beta-1,4-galactosyltransferase	fig|6666666.229915.peg.694
LOS_core_oligosaccharide_biosynthesis	D-glycero-beta-D-manno-heptose 7-phosphate kinase	fig|6666666.229915.peg.2087
LOS_core_oligosaccharide_biosynthesis	O-antigen ligase	fig|6666666.229915.peg.766
LOS_core_oligosaccharide_biosynthesis	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229915.peg.358
LOS_core_oligosaccharide_biosynthesis	Phosphoheptose isomerase 1 (EC 5.3.1.-)	fig|6666666.229915.peg.1348
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229915.peg.777
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229915.peg.780
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229915.peg.779
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229915.peg.776
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229915.peg.782
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229915.peg.781
Lactate_utilization	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229915.peg.1968
Lactate_utilization	L-lactate permease	fig|6666666.229915.peg.1966
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229915.peg.2185
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229915.peg.1272
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229915.peg.468
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229915.peg.1273
Lactose_and_Galactose_Uptake_and_Utilization	Galactose operon repressor, GalR-LacI family of transcriptional regulators	fig|6666666.229915.peg.1275
Lactose_and_Galactose_Uptake_and_Utilization	Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	fig|6666666.229915.peg.1274
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229915.peg.1277
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)	fig|6666666.229915.peg.1276
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	fig|6666666.229915.peg.1278
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229915.peg.2185
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229915.peg.468
Lactose_utilization	Galactoside O-acetyltransferase (EC 2.3.1.18)	fig|6666666.229915.peg.24
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229915.peg.411
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229915.peg.411
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229915.peg.381
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229915.peg.848
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229915.peg.1062
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.229915.peg.847
Lipoic_acid_metabolism	Proposed lipoate regulatory protein YbeD	fig|6666666.229915.peg.846
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.229915.peg.848
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.229915.peg.847
Lipoic_acid_synthesis_cluster	Proposed lipoate regulatory protein YbeD	fig|6666666.229915.peg.846
Lipoic_acid_synthesis_cluster	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229915.peg.2113
Lipopolysaccharide_assembly	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229915.peg.661
Lipopolysaccharide_assembly	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.229915.peg.94
Lipopolysaccharide_assembly	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229915.peg.1546
Lipopolysaccharide_assembly	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229915.peg.1545
Lipopolysaccharide_assembly	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229915.peg.1547
Lipopolysaccharide_assembly	LptA, protein essential for LPS transport across the periplasm	fig|6666666.229915.peg.95
Lipopolysaccharide_assembly	Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex	fig|6666666.229915.peg.1449
Lipopolysaccharide_assembly	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229915.peg.1981
Lipopolysaccharide_assembly	Outer membrane protein H precursor	fig|6666666.229915.peg.1700
Lipopolysaccharide_assembly	Outer membrane protein Imp, required for envelope biogenesis	fig|6666666.229915.peg.1388
Lipopolysaccharide_assembly	Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL)	fig|6666666.229915.peg.116
Lipopolysaccharide_assembly	Outer membrane protein assembly factor YaeT precursor	fig|6666666.229915.peg.1699
Lipopolysaccharide_assembly	Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB)	fig|6666666.229915.peg.712
Lipopolysaccharide_assembly	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229915.peg.652
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, ATP-binding protein YrbF	fig|6666666.229915.peg.97
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, auxiliary component YrbC	fig|6666666.229915.peg.100
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, periplasmic component YrbD	fig|6666666.229915.peg.99
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, permease component YrbE	fig|6666666.229915.peg.98
Lipopolysaccharide_assembly	Uncharacterized protein YrbK clustered with lipopolysaccharide transporters	fig|6666666.229915.peg.96
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229915.peg.1260
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229915.peg.1056
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229915.peg.892
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229915.peg.1546
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229915.peg.1545
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229915.peg.1547
Lipoprotein_sorting_system	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229915.peg.1981
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229915.peg.1702
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.229915.peg.1703
Llipid_A_biosynthesis_cluster	FIG053235: Diacylglucosamine hydrolase like	fig|6666666.229915.peg.1877
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.229915.peg.1704
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.229915.peg.1700
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.229915.peg.1699
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.229915.peg.1040
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.229915.peg.1701
LysR-family_proteins_in_Escherichia_coli	Cys regulon transcriptional activator CysB	fig|6666666.229915.peg.374
LysR-family_proteins_in_Escherichia_coli	Glycine cleavage system transcriptional activator GcvA	fig|6666666.229915.peg.412
LysR-family_proteins_in_Escherichia_coli	HTH-type transcriptional regulator IlvY	fig|6666666.229915.peg.1676
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.229915.peg.514
LysR-family_proteins_in_Escherichia_coli	Transcriptional activator MetR	fig|6666666.229915.peg.2126
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	HTH-type transcriptional regulator IlvY	fig|6666666.229915.peg.1676
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.229915.peg.514
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Transcriptional activator MetR	fig|6666666.229915.peg.2126
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.229915.peg.373
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.229915.peg.1560
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.229915.peg.115
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229915.peg.573
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229915.peg.1585
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.229915.peg.123
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229915.peg.1391
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229915.peg.579
Lysine_Biosynthesis_DAP_Pathway	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229915.peg.1323
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.229915.peg.373
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.229915.peg.1560
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.229915.peg.115
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229915.peg.573
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229915.peg.1585
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.229915.peg.123
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229915.peg.1391
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229915.peg.579
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229915.peg.1323
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.229915.peg.1046
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229915.peg.154
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229915.peg.879
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229915.peg.153
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229915.peg.155
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229915.peg.157
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.639
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.817
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.1261
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229915.peg.705
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229915.peg.1371
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229915.peg.200
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229915.peg.1776
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229915.peg.1272
Maltose_and_Maltodextrin_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.229915.peg.146
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229915.peg.205
Maltose_and_Maltodextrin_Utilization	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229915.peg.1777
Maltose_and_Maltodextrin_Utilization	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)	fig|6666666.229915.peg.1582
Maltose_and_Maltodextrin_Utilization	Maltose operon periplasmic protein MalM	fig|6666666.229915.peg.1583
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.229915.peg.1579
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.229915.peg.1578
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229915.peg.1580
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)	fig|6666666.229915.peg.1581
Maltose_and_Maltodextrin_Utilization	Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon	fig|6666666.229915.peg.291
Maltose_and_Maltodextrin_Utilization	Periplasmic alpha-amylase (EC 3.2.1.1)	fig|6666666.229915.peg.1577
Maltose_and_Maltodextrin_Utilization	Transcriptional activator of maltose regulon, MalT	fig|6666666.229915.peg.1778
Maltose_utilization_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229915.peg.200
Maltose_utilization_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229915.peg.1776
Maltose_utilization_cluster	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229915.peg.1777
Maltose_utilization_cluster	Transcriptional activator of maltose regulon, MalT	fig|6666666.229915.peg.1778
Mannitol_Utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.229915.peg.1745
Mannitol_Utilization	Mannitol operon repressor	fig|6666666.229915.peg.1921
Mannitol_Utilization	Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)	fig|6666666.229915.peg.1920
Mannitol_Utilization	PTS system, mannitol-specific IIA component (EC 2.7.1.69)	fig|6666666.229915.peg.1919
Mannitol_Utilization	PTS system, mannitol-specific IIB component (EC 2.7.1.69)	fig|6666666.229915.peg.1919
Mannitol_Utilization	PTS system, mannitol-specific IIC component (EC 2.7.1.69)	fig|6666666.229915.peg.1919
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229915.peg.1533
Mannitol_Utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229915.peg.1532
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.229915.peg.17
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.229915.peg.2174
Mannose_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229915.peg.48
Mannose_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229915.peg.550
Mannose_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229915.peg.47
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.229915.peg.1458
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229915.peg.1008
Menaquinone_and_Phylloquinone_Biosynthesis	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.229915.peg.934
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.229915.peg.970
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	fig|6666666.229915.peg.969
Menaquinone_and_Phylloquinone_Biosynthesis	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.229915.peg.971
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.229915.peg.900
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229915.peg.901
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.229915.peg.2145
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229915.peg.1008
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.229915.peg.934
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.229915.peg.970
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	fig|6666666.229915.peg.969
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.229915.peg.971
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.229915.peg.900
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229915.peg.901
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.229915.peg.2145
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229915.peg.845
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229915.peg.1596
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229915.peg.1338
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229915.peg.1337
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229915.peg.1847
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229915.peg.427
Methionine_Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.229915.peg.2125
Methionine_Biosynthesis	Cystathionine beta-lyase (EC 4.4.1.8)	fig|6666666.229915.peg.1160
Methionine_Biosynthesis	Cystathionine gamma-synthase (EC 2.5.1.48)	fig|6666666.229915.peg.1848
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.229915.peg.165
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.229915.peg.369
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.229915.peg.123
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229915.peg.124
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.229915.peg.79
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.229915.peg.1917
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.229915.peg.78
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.229915.peg.77
Methionine_Biosynthesis	Methionine repressor MetJ	fig|6666666.229915.peg.1460
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229915.peg.437
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229915.peg.967
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229915.peg.26
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229915.peg.522
Methionine_Biosynthesis	Transcriptional activator MetR	fig|6666666.229915.peg.2126
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229915.peg.79
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229915.peg.1917
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.229915.peg.78
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.229915.peg.77
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229915.peg.383
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229915.peg.437
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229915.peg.967
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229915.peg.26
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229915.peg.437
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229915.peg.2178
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229915.peg.1882
Methylglyoxal_Metabolism	Methylglyoxal synthase (EC 4.2.3.3)	fig|6666666.229915.peg.2106
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229915.peg.1650
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229915.peg.1878
Molybdenum_cofactor_biosynthesis	DNA-binding domain of ModE	fig|6666666.229915.peg.420
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229915.peg.1598
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229915.peg.2062
Molybdenum_cofactor_biosynthesis	Molybdate-binding domain of ModE	fig|6666666.229915.peg.238
Molybdenum_cofactor_biosynthesis	Molybdate-binding domain of ModE	fig|6666666.229915.peg.420
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.229915.peg.421
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.229915.peg.487
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.229915.peg.299
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.229915.peg.298
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.229915.peg.297
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.229915.peg.296
Molybdenum_cofactor_biosynthesis	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	fig|6666666.229915.peg.423
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.229915.peg.422
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.229915.peg.486
Molybdenum_cofactor_biosynthesis	Molybdenum transport system protein ModD	fig|6666666.229915.peg.483
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis molybdochelatase MogA	fig|6666666.229915.peg.1710
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.229915.peg.1599
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeB	fig|6666666.229915.peg.1600
Molybdenum_cofactor_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.229915.peg.792
Molybdenum_cofactor_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobB	fig|6666666.229915.peg.1383
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229915.peg.901
MukBEF_Chromosome_Condensation	Chromosome partition protein MukB	fig|6666666.229915.peg.215
MukBEF_Chromosome_Condensation	Chromosome partition protein MukE	fig|6666666.229915.peg.214
MukBEF_Chromosome_Condensation	Chromosome partition protein MukF	fig|6666666.229915.peg.212
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Inner membrane component of tripartite multidrug resistance system	fig|6666666.229915.peg.450
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Membrane fusion component of tripartite multidrug resistance system	fig|6666666.229915.peg.449
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Outer membrane component of tripartite multidrug resistance system	fig|6666666.229915.peg.234
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.229915.peg.703
Multidrug_Resistance_Efflux_Pumps	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)	fig|6666666.229915.peg.193
Multidrug_Resistance_Efflux_Pumps	Macrolide-specific efflux protein MacA	fig|6666666.229915.peg.194
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229915.peg.1590
Multidrug_Resistance_Efflux_Pumps	RND efflux system, outer membrane lipoprotein CmeC	fig|6666666.229915.peg.192
Multidrug_efflux_pump_in_Campylobacter_jejuni_(CmeABC_operon)	RND efflux system, outer membrane lipoprotein CmeC	fig|6666666.229915.peg.192
Murein_Hydrolases	Beta N-acetyl-glucosaminidase (EC 3.2.1.52)	fig|6666666.229915.peg.1030
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229915.peg.845
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229915.peg.1596
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-)	fig|6666666.229915.peg.1068
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)	fig|6666666.229915.peg.2043
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-)	fig|6666666.229915.peg.1478
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229915.peg.1523
Murein_Hydrolases	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	fig|6666666.229915.peg.1293
Murein_hydrolase_regulation_and_cell_death	Antiholin-like protein LrgA	fig|6666666.229915.peg.2091
Murein_hydrolase_regulation_and_cell_death	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229915.peg.1986
Murein_hydrolase_regulation_and_cell_death	LrgA-associated membrane protein LrgB	fig|6666666.229915.peg.2092
Murein_hydrolase_regulation_and_cell_death	LysR family regulatory protein CidR	fig|6666666.229915.peg.786
Murein_hydrolase_regulation_and_cell_death	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229915.peg.1298
Murein_hydrolase_regulation_and_cell_death	tRNA-dihydrouridine synthase C (EC 1.-.-.-)	fig|6666666.229915.peg.1486
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229915.peg.775
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229915.peg.774
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229915.peg.1673
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229915.peg.1672
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229915.peg.1671
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229915.peg.1397
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229915.peg.1670
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229915.peg.1028
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229915.peg.1255
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Tagatose 1,6-bisphosphate aldolase (EC 4.1.2.40)	fig|6666666.229915.peg.173
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229915.peg.2185
NADPH:quinone_oxidoreductase_2	NADPH:quinone oxidoreductase 2	fig|6666666.229915.peg.530
NADPH:quinone_oxidoreductase_2	Redox-sensing transcriptional regulator QorR	fig|6666666.229915.peg.531
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229915.peg.1321
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229915.peg.1286
NAD_and_NADP_cofactor_biosynthesis_global	NMN 5'-nucleotidase, extracellular (EC 3.1.3.5)	fig|6666666.229915.peg.1065
NAD_and_NADP_cofactor_biosynthesis_global	NMN phosphatase (EC 3.1.3.5)	fig|6666666.229915.peg.59
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamide phosphoribosyltransferase (EC 2.4.2.12)	fig|6666666.229915.peg.121
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1)	fig|6666666.229915.peg.1606
NAD_and_NADP_cofactor_biosynthesis_global	Ribosyl nicotinamide transporter, PnuC-like	fig|6666666.229915.peg.28
NAD_and_NADP_cofactor_biosynthesis_global	Ribosylnicotinamide kinase (EC 2.7.1.22)	fig|6666666.229915.peg.1606
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.229915.peg.406
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229915.peg.405
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.229915.peg.404
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229915.peg.403
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.229915.peg.401
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.229915.peg.402
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229915.peg.1475
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229915.peg.1474
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229915.peg.1473
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229915.peg.1472
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229915.peg.1471
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.229915.peg.1470
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Probable exported or periplasmic protein in ApbE locus	fig|6666666.229915.peg.1468
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	fig|6666666.229915.peg.272
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.229915.peg.273
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)	fig|6666666.229915.peg.271
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Na+/H+ antiporter NhaA type	fig|6666666.229915.peg.1296
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HybG	fig|6666666.229915.peg.268
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.229915.peg.430
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.229915.peg.429
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.229915.peg.1998
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HybF	fig|6666666.229915.peg.2184
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229915.peg.431
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229915.peg.983
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229915.peg.1695
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229915.peg.180
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229915.peg.959
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229915.peg.750
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229915.peg.751
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229915.peg.1971
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229915.peg.1055
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229915.peg.1454
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP compounds hydrolase NudE (EC 3.6.1.-)	fig|6666666.229915.peg.611
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229915.peg.1321
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229915.peg.890
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229915.peg.685
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.229915.peg.663
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.229915.peg.1424
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229915.peg.1734
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229915.peg.1740
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229915.peg.1735
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229915.peg.1736
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229915.peg.2247
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229915.peg.427
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229915.peg.713
One-carbon_metabolism_by_tetrahydropterines	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.229915.peg.338
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229915.peg.1509
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229915.peg.1509
Orphan_regulatory_proteins	Copper sensory histidine kinase CpxA	fig|6666666.229915.peg.1447
Orphan_regulatory_proteins	Copper-sensing two-component system response regulator CpxR	fig|6666666.229915.peg.1448
Orphan_regulatory_proteins	DNA transformation protein TfoX	fig|6666666.229915.peg.1669
Orphan_regulatory_proteins	Glycine cleavage system transcriptional activator GcvA	fig|6666666.229915.peg.412
Orphan_regulatory_proteins	Sensory histidine kinase QseC	fig|6666666.229915.peg.387
Orphan_regulatory_proteins	Two-component system response regulator QseB	fig|6666666.229915.peg.388
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229915.peg.349
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229915.peg.1819
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229915.peg.2169
Osmotic_stress_cluster	Heat shock (predicted periplasmic) protein YciM, precursor	fig|6666666.229915.peg.2136
Osmotic_stress_cluster	Osmotically inducible lipoprotein B precursor	fig|6666666.229915.peg.1124
Osmotic_stress_cluster	Phosphatidylglycerophosphatase B (EC 3.1.3.27)	fig|6666666.229915.peg.2063
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.229915.peg.32
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.229915.peg.865
Oxidative_stress	Ferric uptake regulation protein FUR	fig|6666666.229915.peg.2141
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.229915.peg.448
Oxidative_stress	Fumarate and nitrate reduction regulatory protein	fig|6666666.229915.peg.221
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.229915.peg.514
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.229915.peg.448
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229915.peg.983
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.229915.peg.448
Oxidative_stress	Paraquat-inducible protein A	fig|6666666.229915.peg.2024
Oxidative_stress	Paraquat-inducible protein B	fig|6666666.229915.peg.2025
Oxidative_stress	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.229915.peg.1007
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.229915.peg.601
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.229915.peg.604
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.229915.peg.605
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229915.peg.137
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229915.peg.1970
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229915.peg.753
Pentose_phosphate_pathway	Transketolase, C-terminal section (EC 2.2.1.1)	fig|6666666.229915.peg.2101
Pentose_phosphate_pathway	Transketolase, N-terminal section (EC 2.2.1.1)	fig|6666666.229915.peg.2100
Peptide_methionine_sulfoxide_reductase	Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase	fig|6666666.229915.peg.362
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229915.peg.361
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229915.peg.361
Peptide_methionine_sulfoxide_reductase	Thiol:disulfide oxidoreductase associated with MetSO reductase	fig|6666666.229915.peg.363
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229915.peg.1339
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229915.peg.1331
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229915.peg.845
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229915.peg.1596
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229915.peg.494
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229915.peg.80
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229915.peg.111
Peptidoglycan_Biosynthesis	Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)	fig|6666666.229915.peg.2043
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.229915.peg.1295
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229915.peg.477
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229915.peg.679
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229915.peg.1841
Peptidoglycan_Biosynthesis	Murein-DD-endopeptidase (EC 3.4.99.-)	fig|6666666.229915.peg.211
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229915.peg.494
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229915.peg.842
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.229915.peg.1336
Peptidoglycan_Biosynthesis	Rare lipoprotein A precursor	fig|6666666.229915.peg.844
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.229915.peg.843
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229915.peg.1666
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229915.peg.103
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229915.peg.1333
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229915.peg.1332
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229915.peg.1335
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229915.peg.1338
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229915.peg.1337
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229915.peg.1331
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229915.peg.1332
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)	fig|6666666.229915.peg.1069
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229915.peg.1335
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229915.peg.1338
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229915.peg.1337
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.229915.peg.1060
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.229915.peg.823
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229915.peg.511
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229915.peg.8
Peptidyl-prolyl_cis-trans_isomerase	Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8)	fig|6666666.229915.peg.850
Peptidyl-prolyl_cis-trans_isomerase	Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)	fig|6666666.229915.peg.952
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229915.peg.652
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229915.peg.1700
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegQ, serine protease	fig|6666666.229915.peg.2170
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegS	fig|6666666.229915.peg.416
Periplasmic_Stress_Response	Sigma factor RpoE negative regulatory protein RseA	fig|6666666.229915.peg.1380
Periplasmic_Stress_Response	Sigma factor RpoE negative regulatory protein RseB precursor	fig|6666666.229915.peg.1381
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229915.peg.652
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase	fig|6666666.229915.peg.993
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.229915.peg.1854
Periplasmic_disulfide_interchange	Periplasmic thiol:disulfide interchange protein DsbA	fig|6666666.229915.peg.794
Periplasmic_disulfide_interchange	Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation	fig|6666666.229915.peg.975
Periplasmic_disulfide_interchange	Thiol:disulfide interchange protein DsbC	fig|6666666.229915.peg.440
Persister_Cells	Cell division inhibitor	fig|6666666.229915.peg.407
Persister_Cells	HipA protein	fig|6666666.229915.peg.452
Persister_Cells	HipA protein	fig|6666666.229915.peg.453
Persister_Cells	HipA protein	fig|6666666.229915.peg.455
Phage_baseplate_proteins	Phage baseplate	fig|6666666.229915.peg.1723
Phage_capsid_proteins	Phage major capsid protein	fig|6666666.229915.peg.2230
Phage_packaging_machinery	Phage terminase small subunit	fig|6666666.229915.peg.2236
Phage_packaging_machinery	Phage terminase, large subunit	fig|6666666.229915.peg.1102
Phage_packaging_machinery	Phage terminase, large subunit	fig|6666666.229915.peg.2198
Phage_packaging_machinery	Phage terminase, small subunit	fig|6666666.229915.peg.1101
Phage_packaging_machinery	Phage terminase, small subunit	fig|6666666.229915.peg.2197
Phage_tail_proteins	Phage tail assembly	fig|6666666.229915.peg.1183
Phage_tail_proteins	Phage tail length tape-measure protein	fig|6666666.229915.peg.1116
Phage_tail_proteins	Phage tail length tape-measure protein	fig|6666666.229915.peg.2221
Phage_tail_proteins	Phage tape measure protein	fig|6666666.229915.peg.1717
Phage_tail_proteins_2	Phage tail assembly	fig|6666666.229915.peg.1183
Phage_tail_proteins_2	Phage tail length tape-measure protein	fig|6666666.229915.peg.1116
Phage_tail_proteins_2	Phage tail length tape-measure protein	fig|6666666.229915.peg.2221
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.229915.peg.1963
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229915.peg.377
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229915.peg.378
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229915.peg.1326
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229915.peg.377
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229915.peg.378
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57)	fig|6666666.229915.peg.1945
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.229915.peg.1326
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Transcriptional repressor protein TyrR	fig|6666666.229915.peg.1518
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229915.peg.748
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229915.peg.1421
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.229915.peg.55
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229915.peg.1749
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.229915.peg.1750
Phosphate_metabolism	Phosphate transport regulator (distant homolog of PhoU)	fig|6666666.229915.peg.1976
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.229915.peg.1975
Phosphoglycerate_mutase_protein_family	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229915.peg.890
Phosphoglycerate_mutase_protein_family	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229915.peg.69
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229915.peg.65
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229915.peg.1405
Phosphoglycerate_mutase_protein_family	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229915.peg.70
Phosphoglycerate_transport_system	Phosphoglycerate transport regulatory protein PgtC	fig|6666666.229915.peg.330
Phosphoglycerate_transport_system	Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-)	fig|6666666.229915.peg.329
Phosphoglycerate_transport_system	Phosphoglycerate transport system transcriptional regulatory protein PgtA	fig|6666666.229915.peg.328
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60)	fig|6666666.229915.peg.598
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] reductase (EC 1.1.1.100)	fig|6666666.229915.peg.599
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] synthase	fig|6666666.229915.peg.584
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like	fig|6666666.229915.peg.597
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Acyl carrier protein (ACP1)	fig|6666666.229915.peg.586
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Acyl carrier protein (ACP2)	fig|6666666.229915.peg.587
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein	fig|6666666.229915.peg.593
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG017861: hypothetical protein	fig|6666666.229915.peg.589
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase	fig|6666666.229915.peg.585
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG021862: membrane protein, exporter	fig|6666666.229915.peg.595
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG027190: Putative transmembrane protein	fig|6666666.229915.peg.594
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG085779: Lipoprotein	fig|6666666.229915.peg.596
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41)	fig|6666666.229915.peg.600
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG143263: Glycosyl transferase	fig|6666666.229915.peg.591
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase	fig|6666666.229915.peg.588
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase	fig|6666666.229915.peg.590
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Lysophospholipid acyltransferase	fig|6666666.229915.peg.592
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229915.peg.1162
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229915.peg.80
Polyadenylation_bacterial	Poly(A) polymerase (EC 2.7.7.19)	fig|6666666.229915.peg.1768
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229915.peg.927
Polyadenylation_bacterial	RNA-binding protein Hfq	fig|6666666.229915.peg.1520
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229915.peg.1973
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229915.peg.437
Polyamine_Metabolism	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	fig|6666666.229915.peg.542
Polyamine_Metabolism	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	fig|6666666.229915.peg.1987
Polyamine_Metabolism	Arginine/ornithine antiporter ArcD	fig|6666666.229915.peg.1638
Polyamine_Metabolism	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229915.peg.1639
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229915.peg.1990
Polyamine_Metabolism	Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)	fig|6666666.229915.peg.1989
Polyamine_Metabolism	Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)	fig|6666666.229915.peg.1988
Polyhydroxybutyrate_metabolism	D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)	fig|6666666.229915.peg.808
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229915.peg.748
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229915.peg.1421
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229915.peg.181
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229915.peg.1876
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229915.peg.181
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229915.peg.1876
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229915.peg.1696
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229915.peg.511
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229915.peg.8
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.229915.peg.5
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229915.peg.2146
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229915.peg.1603
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229915.peg.1603
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229915.peg.4
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229915.peg.4
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	LSU ribosomal protein L9p	fig|6666666.229915.peg.730
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	Primosomal replication protein N	fig|6666666.229915.peg.732
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	SSU ribosomal protein S18p	fig|6666666.229915.peg.731
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	SSU ribosomal protein S6p	fig|6666666.229915.peg.733
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229915.peg.441
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229915.peg.441
Proline,_4-hydroxyproline_uptake_and_utilization	ProQ: influences osmotic activation of compatible solute ProP	fig|6666666.229915.peg.2023
Proline,_4-hydroxyproline_uptake_and_utilization	Proline/sodium symporter PutP (TC 2.A.21.2.1)	fig|6666666.229915.peg.1221
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.229915.peg.1074
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.229915.peg.822
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229915.peg.866
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229915.peg.1050
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229915.peg.1772
Proteasome_bacterial	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229915.peg.946
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229915.peg.947
Proteasome_bacterial	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229915.peg.61
Proteasome_bacterial	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229915.peg.60
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229915.peg.152
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229915.peg.319
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.229915.peg.32
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.229915.peg.865
Protection_from_Reactive_Oxygen_Species	Cytochrome c551 peroxidase (EC 1.11.1.5)	fig|6666666.229915.peg.2080
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229915.peg.983
Protection_from_Reactive_Oxygen_Species	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.229915.peg.1007
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229915.peg.1153
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229915.peg.1152
Protein_chaperones	Chaperone protein HscA	fig|6666666.229915.peg.1247
Protein_chaperones	Chaperone protein HscB	fig|6666666.229915.peg.1246
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229915.peg.1325
Protein_chaperones	ClpB protein	fig|6666666.229915.peg.575
Protein_chaperones	DnaJ-class molecular chaperone CbpA	fig|6666666.229915.peg.1225
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229915.peg.1284
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.229915.peg.1651
Protein_deglycation	Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation	fig|6666666.229915.peg.348
Protein_degradation	Oligopeptidase A (EC 3.4.24.70)	fig|6666666.229915.peg.1537
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229915.peg.946
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229915.peg.947
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229915.peg.61
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229915.peg.60
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229915.peg.152
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229915.peg.319
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229915.peg.575
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229915.peg.1978
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegQ, serine protease	fig|6666666.229915.peg.2170
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegS	fig|6666666.229915.peg.416
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229915.peg.181
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229915.peg.1876
Protocatechuate_branch_of_beta-ketoadipate_pathway	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.229915.peg.647
Purine_Utilization	Guanine-hypoxanthine permease	fig|6666666.229915.peg.2187
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229915.peg.391
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229915.peg.15
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229915.peg.2151
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229915.peg.2181
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229915.peg.648
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.229915.peg.1223
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.229915.peg.1730
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.229915.peg.85
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229915.peg.930
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229915.peg.1126
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229915.peg.1256
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229915.peg.43
Purine_conversions	Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.229915.peg.1386
Purine_nucleotide_synthesis_regulator	Purine nucleotide synthesis repressor	fig|6666666.229915.peg.370
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229915.peg.91
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229915.peg.182
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229915.peg.1126
Putative_TldE-TldD_proteolytic_complex	FIG138315: Putative alpha helix protein	fig|6666666.229915.peg.932
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229915.peg.481
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229915.peg.931
Putative_sugar_ABC_transporter_(ytf_cluster)	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229915.peg.1070
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229915.peg.361
Putative_sugar_ABC_transporter_(ytf_cluster)	Uncharacterized protein YtfM precursor	fig|6666666.229915.peg.1419
Putative_sugar_ABC_transporter_(ytf_cluster)	Uncharacterized protein YtfN	fig|6666666.229915.peg.1420
Pyrene_degradation	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.229915.peg.647
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229915.peg.180
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229915.peg.138
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229915.peg.86
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229915.peg.1964
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.229915.peg.2189
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.229915.peg.36
Pyrimidine_utilization	Uracil permease	fig|6666666.229915.peg.954
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase, biosynthetic (EC 5.1.1.1)	fig|6666666.229915.peg.1551
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229915.peg.411
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.229915.peg.964
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.229915.peg.965
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229915.peg.984
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	fig|6666666.229915.peg.272
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.229915.peg.273
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)	fig|6666666.229915.peg.271
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229915.peg.1422
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229915.peg.280
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229915.peg.1937
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229915.peg.1773
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.229915.peg.2108
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229915.peg.382
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	fig|6666666.229915.peg.381
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229915.peg.1218
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229915.peg.1772
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229915.peg.383
Queuosine-Archaeosine_Biosynthesis	Dihydroneopterin triphosphate pyrophosphohydolase type 2	fig|6666666.229915.peg.1889
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229915.peg.1598
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8)	fig|6666666.229915.peg.850
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229915.peg.189
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229915.peg.1037
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229915.peg.1872
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229915.peg.1873
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229915.peg.1412
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.229915.peg.1315
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.229915.peg.444
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229915.peg.443
Queuosine-Archaeosine_Biosynthesis	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229915.peg.136
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229915.peg.1946
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229915.peg.1943
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229915.peg.902
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229915.peg.49
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.229915.peg.1497
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-)	fig|6666666.229915.peg.1029
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)	fig|6666666.229915.peg.1309
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229915.peg.725
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229915.peg.841
RNA_methylation	LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM	fig|6666666.229915.peg.413
RNA_methylation	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229915.peg.337
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229915.peg.16
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229915.peg.861
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229915.peg.962
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229915.peg.1127
RNA_methylation	Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52)	fig|6666666.229915.peg.1912
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229915.peg.1461
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229915.peg.653
RNA_methylation	hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]	fig|6666666.229915.peg.772
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229915.peg.532
RNA_methylation	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229915.peg.1282
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229915.peg.719
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.229915.peg.29
RNA_methylation	tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)	fig|6666666.229915.peg.75
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229915.peg.1481
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229915.peg.1467
RNA_methylation	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229915.peg.1241
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229915.peg.1162
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229915.peg.1017
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229915.peg.532
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229915.peg.528
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229915.peg.1017
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229915.peg.1015
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229915.peg.1012
RNA_modification_cluster	Protein YidD	fig|6666666.229915.peg.1014
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229915.peg.1013
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229915.peg.1610
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229915.peg.775
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229915.peg.774
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.229915.peg.84
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.229915.peg.724
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.229915.peg.1530
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229915.peg.1220
RNA_processing_and_degradation,_bacterial	Exoribonuclease II (EC 3.1.13.1)	fig|6666666.229915.peg.447
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.229915.peg.1852
RNA_processing_and_degradation,_bacterial	Ribonuclease E inhibitor RraA	fig|6666666.229915.peg.933
RNA_processing_and_degradation,_bacterial	Ribonuclease E inhibitor RraB	fig|6666666.229915.peg.6
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229915.peg.1019
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.27
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.188
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229915.peg.375
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229915.peg.1851
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229915.peg.711
RNA_pseudouridine_syntheses	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.985
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.311
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.1370
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229915.peg.1741
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229915.peg.324
Rcs_phosphorelay_signal_transduction_pathway	DnaJ-like protein DjlA	fig|6666666.229915.peg.1487
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229915.peg.1385
Recycling_of_Peptidoglycan_Amino_Acids	AmpG permease	fig|6666666.229915.peg.2183
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229915.peg.1523
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD	fig|6666666.229915.peg.925
Recycling_of_Peptidoglycan_Amino_Acids	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)	fig|6666666.229915.peg.1069
Recycling_of_Peptidoglycan_Amino_Sugars	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-)	fig|6666666.229915.peg.495
Recycling_of_Peptidoglycan_Amino_Sugars	Beta N-acetyl-glucosaminidase (EC 3.2.1.52)	fig|6666666.229915.peg.1030
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229915.peg.2140
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229915.peg.1395
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229915.peg.2161
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229915.peg.2163
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229915.peg.353
Respiratory_dehydrogenases_1	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229915.peg.1968
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229915.peg.352
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229915.peg.301
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229915.peg.545
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229915.peg.1568
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229915.peg.1571
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229915.peg.547
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229915.peg.941
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229915.peg.1572
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229915.peg.544
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229915.peg.937
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229915.peg.1566
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229915.peg.1567
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229915.peg.546
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229915.peg.656
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229915.peg.940
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229915.peg.1570
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229915.peg.1737
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229915.peg.2118
Rhamnose_containing_glycans	Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.-)	fig|6666666.229915.peg.2055
Rhamnose_containing_glycans	DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase	fig|6666666.229915.peg.2040
Rhamnose_containing_glycans	DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase	fig|6666666.229915.peg.2051
Rhamnose_containing_glycans	DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase	fig|6666666.229915.peg.2059
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229915.peg.2045
Rhamnose_containing_glycans	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229915.peg.2049
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229915.peg.2185
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229915.peg.2047
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.229915.peg.2046
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229915.peg.2044
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229915.peg.2060
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229915.peg.52
Riboflavin,_FMN_and_FAD_metabolism	5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase	fig|6666666.229915.peg.581
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229915.peg.415
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229915.peg.1555
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229915.peg.415
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229915.peg.1059
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229915.peg.2062
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229915.peg.1059
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229915.peg.1591
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229915.peg.52
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase	fig|6666666.229915.peg.581
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229915.peg.415
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229915.peg.1555
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229915.peg.415
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229915.peg.1890
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229915.peg.1059
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229915.peg.2062
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229915.peg.1590
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229915.peg.1059
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229915.peg.1591
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229915.peg.1282
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229915.peg.1741
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229915.peg.52
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229915.peg.415
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229915.peg.1555
Riboflavin_synthesis_cluster	Diacylglycerol kinase (EC 2.7.1.107)	fig|6666666.229915.peg.1499
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229915.peg.415
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229915.peg.2062
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229915.peg.352
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229915.peg.2137
Riboflavin_synthesis_cluster	Phosphatidylglycerophosphatase A (EC 3.1.3.27)	fig|6666666.229915.peg.1558
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229915.peg.1591
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229915.peg.753
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229915.peg.1557
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.229915.peg.1556
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229915.peg.1961
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229915.peg.1705
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229915.peg.1705
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229915.peg.854
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229915.peg.855
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229915.peg.278
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229915.peg.1565
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229915.peg.279
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229915.peg.1563
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.229915.peg.414
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229915.peg.1650
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229915.peg.1673
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229915.peg.1617
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.229915.peg.777
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.229915.peg.780
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.229915.peg.313
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.229915.peg.1624
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.229915.peg.1616
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.229915.peg.1628
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.229915.peg.1609
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.229915.peg.1618
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.229915.peg.720
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229915.peg.779
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.229915.peg.342
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.229915.peg.1875
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.229915.peg.1630
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.229915.peg.1633
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.229915.peg.1623
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.229915.peg.208
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.229915.peg.1874
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.229915.peg.689
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.229915.peg.1627
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.229915.peg.1632
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.229915.peg.695
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.229915.peg.1856
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-dependent	fig|6666666.229915.peg.695
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.229915.peg.1856
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.229915.peg.830
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.229915.peg.690
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.229915.peg.690
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.229915.peg.1012
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.229915.peg.1614
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.229915.peg.1857
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.229915.peg.1635
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.229915.peg.1634
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.229915.peg.1622
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.229915.peg.1619
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229915.peg.776
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.229915.peg.730
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.229915.peg.1636
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.229915.peg.1612
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.229915.peg.1673
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.229915.peg.1613
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.229915.peg.1621
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.229915.peg.1621
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.229915.peg.968
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.229915.peg.717
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.229915.peg.1626
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.229915.peg.731
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.229915.peg.731
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.229915.peg.1631
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.229915.peg.2133
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.229915.peg.1061
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.229915.peg.155
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.229915.peg.1493
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.229915.peg.1629
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.229915.peg.1611
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.229915.peg.1617
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.229915.peg.733
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.229915.peg.1672
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.229915.peg.1620
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.229915.peg.312
Ribosome_activity_modulation	Ribosome hibernation protein YfiA	fig|6666666.229915.peg.916
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229915.peg.718
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229915.peg.841
Ribosome_biogenesis_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.229915.peg.1852
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.27
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.188
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229915.peg.1851
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229915.peg.711
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.229915.peg.912
Ribosome_biogenesis_bacterial	Ribosomal protein S6 glutaminyl transferase	fig|6666666.229915.peg.465
Ribosome_biogenesis_bacterial	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229915.peg.1910
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229915.peg.653
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229915.peg.2076
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229915.peg.719
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229915.peg.1694
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229915.peg.1493
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229915.peg.1494
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229915.peg.1692
Rrf2_family_transcriptional_regulators	Iron-sulfur cluster regulator IscR	fig|6666666.229915.peg.1242
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.229915.peg.1892
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229915.peg.1890
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229915.peg.1893
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229915.peg.1894
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	HflC protein	fig|6666666.229915.peg.129
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	HflK protein	fig|6666666.229915.peg.128
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229915.peg.1252
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229915.peg.1946
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like	fig|6666666.229915.peg.1253
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229915.peg.1524
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229915.peg.1943
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.229915.peg.1374
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229915.peg.1755
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.229915.peg.1373
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229915.peg.2012
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229915.peg.2013
Septum_site-determining_cluster_Min	Septum site-determining protein MinC	fig|6666666.229915.peg.1141
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229915.peg.138
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229915.peg.1964
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229915.peg.1063
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229915.peg.1063
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229915.peg.1914
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229915.peg.1056
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229915.peg.1539
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229915.peg.1864
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229915.peg.1429
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229915.peg.494
Sialic_Acid_Metabolism	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229915.peg.1812
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229915.peg.494
Sialic_Acid_Metabolism	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.229915.peg.1813
Sialic_Acid_Metabolism	N-acetylmannosamine kinase (EC 2.7.1.60)	fig|6666666.229915.peg.1809
Sialic_Acid_Metabolism	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)	fig|6666666.229915.peg.1808
Sialic_Acid_Metabolism	N-acetylneuraminate lyase (EC 4.1.3.3)	fig|6666666.229915.peg.1811
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229915.peg.1804
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229915.peg.2176
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229915.peg.1804
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229915.peg.2176
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229915.peg.1804
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229915.peg.2176
Sialic_Acid_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229915.peg.48
Sialic_Acid_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229915.peg.550
Sialic_Acid_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229915.peg.47
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229915.peg.67
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229915.peg.1138
Sialic_Acid_Metabolism	Putative sugar isomerase involved in processing of exogenous sialic acid	fig|6666666.229915.peg.926
Sialic_Acid_Metabolism	Sialic acid utilization regulator, RpiR family	fig|6666666.229915.peg.1810
Sialic_Acid_Metabolism	Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase	fig|6666666.229915.peg.1805
Sialic_Acid_Metabolism	TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter	fig|6666666.229915.peg.1806
Sialic_Acid_Metabolism	TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein	fig|6666666.229915.peg.1807
Sialic_Acid_Metabolism	TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter	fig|6666666.229915.peg.1806
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229915.peg.1056
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229915.peg.1020
Single-Rhodanese-domain_proteins	Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1)	fig|6666666.229915.peg.1684
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome C553 (soluble cytochrome f)	fig|6666666.229915.peg.1831
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.229915.peg.998
Soluble_cytochromes_and_functionally_related_electron_carriers	Ferredoxin	fig|6666666.229915.peg.1561
Soluble_cytochromes_and_functionally_related_electron_carriers	Ferredoxin, 2Fe-2S	fig|6666666.229915.peg.1248
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229915.peg.170
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.229915.peg.1730
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229915.peg.1508
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.229915.peg.77
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229915.peg.731
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229915.peg.1865
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229915.peg.750
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229915.peg.751
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.229915.peg.748
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229915.peg.752
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229915.peg.1340
Stationary_phase_repair_cluster	FIG139438: lipoprotein B	fig|6666666.229915.peg.747
Stationary_phase_repair_cluster	Lipoprotein NlpD	fig|6666666.229915.peg.745
Stationary_phase_repair_cluster	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229915.peg.749
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.229915.peg.1498
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.229915.peg.83
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.229915.peg.83
Succinate_dehydrogenase	Fumarate reductase subunit C	fig|6666666.229915.peg.1307
Succinate_dehydrogenase	Fumarate reductase subunit D	fig|6666666.229915.peg.1308
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229915.peg.1305
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229915.peg.1306
Sucrose_utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.229915.peg.1745
Sulfate_reduction-associated_complexes	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229915.peg.2113
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229915.peg.2113
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229915.peg.507
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229915.peg.508
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229915.peg.509
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229915.peg.709
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.229915.peg.2018
TCA_Cycle	Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	fig|6666666.229915.peg.1266
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229915.peg.381
TCA_Cycle	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	fig|6666666.229915.peg.381
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.229915.peg.2017
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.229915.peg.463
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229915.peg.409
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229915.peg.1305
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229915.peg.1306
TCA_Cycle	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	fig|6666666.229915.peg.2014
TCA_Cycle	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	fig|6666666.229915.peg.2015
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, large permease component	fig|6666666.229915.peg.145
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, periplasmic component	fig|6666666.229915.peg.144
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229915.peg.751
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229915.peg.2049
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229915.peg.1847
Tellurite_resistance:_Chromosomal_determinants	Tellurite resistance protein TehB	fig|6666666.229915.peg.1779
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.229915.peg.1896
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229915.peg.1897
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229915.peg.2070
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229915.peg.517
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229915.peg.2071
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.229915.peg.1896
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229915.peg.1897
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229915.peg.2070
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229915.peg.517
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229915.peg.2071
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229915.peg.1671
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229915.peg.1671
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229915.peg.180
Thiamin_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229915.peg.1243
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229915.peg.332
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229915.peg.1800
Thiamin_biosynthesis	Thiamin ABC transporter, substrate-binding component	fig|6666666.229915.peg.1798
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229915.peg.1799
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229915.peg.1557
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.229915.peg.514
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229915.peg.114
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.229915.peg.1815
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229915.peg.2072
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229915.peg.1773
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229915.peg.1772
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.229915.peg.965
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.229
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.554
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.555
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229915.peg.972
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229915.peg.573
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229915.peg.1585
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.229915.peg.123
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.229915.peg.123
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229915.peg.124
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229915.peg.126
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.229915.peg.1899
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.229915.peg.637
Ton_and_Tol_transport_systems	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229915.peg.638
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229915.peg.636
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.229915.peg.1900
Ton_and_Tol_transport_systems	Peptidoglycan-associated lipoprotein precursor	fig|6666666.229915.peg.1904
Ton_and_Tol_transport_systems	Tol biopolymer transport system, TolR protein	fig|6666666.229915.peg.1901
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229915.peg.1902
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229915.peg.239
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229915.peg.244
Ton_and_Tol_transport_systems	tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins	fig|6666666.229915.peg.1903
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229915.peg.1731
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229915.peg.197
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229915.peg.260
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229915.peg.196
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229915.peg.259
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229915.peg.309
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229915.peg.936
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229915.peg.1959
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229915.peg.2036
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229915.peg.2035
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229915.peg.1734
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229915.peg.1402
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229915.peg.1407
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229915.peg.781
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229915.peg.1595
Transcription_factors_bacterial	Transcription elongation factor GreB	fig|6666666.229915.peg.1408
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229915.peg.838
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229915.peg.1735
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229915.peg.1556
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229915.peg.1349
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229915.peg.153
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoE	fig|6666666.229915.peg.1379
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoH	fig|6666666.229915.peg.1668
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE negative regulatory protein RseA	fig|6666666.229915.peg.1380
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE negative regulatory protein RseB precursor	fig|6666666.229915.peg.1381
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE regulatory protein RseC	fig|6666666.229915.peg.1382
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229915.peg.1647
Transcription_repair_cluster	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229915.peg.494
Transcription_repair_cluster	LSU ribosomal protein L25p	fig|6666666.229915.peg.208
Transcription_repair_cluster	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229915.peg.494
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229915.peg.170
Transcription_repair_cluster	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229915.peg.1970
Transcription_repair_cluster	Transcription-repair coupling factor	fig|6666666.229915.peg.1349
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229915.peg.1671
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.229915.peg.1045
Translation_elongation_factor_P_lysylation	Translation elongation factor P Lys34:lysine transferase	fig|6666666.229915.peg.1304
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229915.peg.1671
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.229915.peg.1021
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.229915.peg.1045
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.229915.peg.1494
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229915.peg.1397
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229915.peg.1670
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229915.peg.2
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229915.peg.1740
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229915.peg.1259
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229915.peg.1736
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229915.peg.2247
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229915.peg.344
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.229915.peg.2138
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229915.peg.1844
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229915.peg.1146
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229915.peg.441
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.229915.peg.1785
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229915.peg.1
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229915.peg.170
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229915.peg.1145
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229915.peg.1694
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229915.peg.1865
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229915.peg.432
Transport_of_Nickel_and_Cobalt	Additional component NikL of nickel ECF transporter	fig|6666666.229915.peg.435
Transport_of_Nickel_and_Cobalt	Additional periplasmic component NikK of nickel ECF transporter	fig|6666666.229915.peg.436
Transport_of_Nickel_and_Cobalt	Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)	fig|6666666.229915.peg.62
Transport_of_Nickel_and_Cobalt	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229915.peg.434
Transport_of_Nickel_and_Cobalt	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229915.peg.433
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229915.peg.1604
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229915.peg.1603
Transport_system_clustering_with_HemG	Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)	fig|6666666.229915.peg.1602
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229915.peg.201
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229915.peg.202
Trehalose_Uptake_and_Utilization	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)	fig|6666666.229915.peg.1582
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229915.peg.801
Triacylglycerol_metabolism	Lysophospholipase L2 (EC 3.1.1.5)	fig|6666666.229915.peg.765
Triacylglycerol_metabolism	Putative lipase in cluster with Phosphatidate cytidylyltransferase	fig|6666666.229915.peg.825
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229915.peg.1540
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229915.peg.258
Tryptophan_synthesis	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.229915.peg.256
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.229915.peg.255
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229915.peg.261
Tryptophan_synthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229915.peg.1542
Tryptophan_synthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229915.peg.1541
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229915.peg.261
Tryptophan_synthesis	Transcriptional repressor protein TrpR	fig|6666666.229915.peg.1294
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229915.peg.277
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229915.peg.276
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.229915.peg.616
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.229915.peg.617
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.229915.peg.618
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.229915.peg.1343
Type_IV_pilus	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229915.peg.672
Type_IV_pilus	Leader peptidase (Prepilin peptidase) (EC 3.4.23.43)	fig|6666666.229915.peg.921
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229915.peg.477
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229915.peg.679
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229915.peg.1841
Type_IV_pilus	N-methyltransferase (EC 2.1.1.-)	fig|6666666.229915.peg.921
Type_IV_pilus	Type IV fimbrial assembly protein PilC	fig|6666666.229915.peg.922
Type_IV_pilus	Type IV fimbrial assembly, ATPase PilB	fig|6666666.229915.peg.923
Type_IV_pilus	Type IV pilin PilA	fig|6666666.229915.peg.924
Type_IV_pilus	Type IV pilus biogenesis protein PilM	fig|6666666.229915.peg.678
Type_IV_pilus	Type IV pilus biogenesis protein PilN	fig|6666666.229915.peg.677
Type_IV_pilus	Type IV pilus biogenesis protein PilQ	fig|6666666.229915.peg.674
Type_IV_pilus	Type IV pilus biogenesis protein PilQ	fig|6666666.229915.peg.675
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229915.peg.547
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229915.peg.941
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229915.peg.1572
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229915.peg.544
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229915.peg.937
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229915.peg.1566
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229915.peg.1567
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229915.peg.546
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229915.peg.656
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229915.peg.940
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229915.peg.1570
Type_VI_secretion_systems	ClpB protein	fig|6666666.229915.peg.575
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229915.peg.1429
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229915.peg.494
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229915.peg.494
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229915.peg.67
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229915.peg.1138
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229915.peg.1666
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229915.peg.103
USS-DB-7	ClpB protein	fig|6666666.229915.peg.575
Ubiquinone_Biosynthesis	Chorismate--pyruvate lyase (EC 4.1.3.40)	fig|6666666.229915.peg.81
Ubiquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229915.peg.1008
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229915.peg.169
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229915.peg.1226
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229915.peg.72
Universal_GTPases	GTP-binding protein Era	fig|6666666.229915.peg.1018
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229915.peg.1871
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.229915.peg.112
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229915.peg.1017
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229915.peg.1531
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229915.peg.50
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229915.peg.113
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229915.peg.641
Universal_GTPases	Translation elongation factor G	fig|6666666.229915.peg.1671
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229915.peg.1021
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229915.peg.1397
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229915.peg.1670
Universal_GTPases	Translation initiation factor 2	fig|6666666.229915.peg.1736
Universal_GTPases	Translation initiation factor 2	fig|6666666.229915.peg.2247
Universal_stress_protein_family	Universal stress protein A	fig|6666666.229915.peg.1455
Universal_stress_protein_family	Universal stress protein E	fig|6666666.229915.peg.222
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229915.peg.361
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.229915.peg.1980
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.229915.peg.207
Uptake_of_selenate_and_selenite	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.229915.peg.1576
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.229915.peg.1024
VC0266	Hypothetical protein VC0266 (sugar utilization related?)	fig|6666666.229915.peg.167
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229915.peg.411
Widespread_colonization_island	Flp pilus assembly protein RcpB	fig|6666666.229915.peg.1357
Widespread_colonization_island	Flp pilus assembly protein RcpC/CpaB	fig|6666666.229915.peg.1355
Widespread_colonization_island	Flp pilus assembly protein TadB	fig|6666666.229915.peg.1360
Widespread_colonization_island	Flp pilus assembly protein TadD, contains TPR repeat	fig|6666666.229915.peg.1362
Widespread_colonization_island	Flp pilus assembly surface protein TadF, ATP/GTP-binding motif	fig|6666666.229915.peg.1363
Widespread_colonization_island	Protein TadG, associated with Flp pilus assembly	fig|6666666.229915.peg.1364
Widespread_colonization_island	Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily	fig|6666666.229915.peg.1359
Widespread_colonization_island	Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly	fig|6666666.229915.peg.1358
Widespread_colonization_island	Type II/IV secretion system protein TadC, associated with Flp pilus assembly	fig|6666666.229915.peg.1361
Widespread_colonization_island	Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly	fig|6666666.229915.peg.1356
Widespread_colonization_island	Type IV prepilin peptidase TadV/CpaA	fig|6666666.229915.peg.1354
Xylose_utilization	D-xylose transport ATP-binding protein XylG	fig|6666666.229915.peg.557
Xylose_utilization	Xylose ABC transporter, periplasmic xylose-binding protein XylF	fig|6666666.229915.peg.558
Xylose_utilization	Xylose ABC transporter, permease protein XylH	fig|6666666.229915.peg.556
Xylose_utilization	Xylose activator XylR (AraC family)	fig|6666666.229915.peg.552
Xylose_utilization	Xylose isomerase (EC 5.3.1.5)	fig|6666666.229915.peg.559
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229915.peg.560
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229915.peg.814
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.229915.peg.853
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229915.peg.2076
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229915.peg.157
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229915.peg.2076
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229915.peg.1524
YrdC-YciO-Sua5_protein_family	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229915.peg.226
YrdC-YciO-Sua5_protein_family	Hypothetical YciO protein, TsaC/YrdC paralog	fig|6666666.229915.peg.376
YrdC-YciO-Sua5_protein_family	Peptide chain release factor 1	fig|6666666.229915.peg.1146
YrdC-YciO-Sua5_protein_family	Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p	fig|6666666.229915.peg.2102
YrdC-YciO-Sua5_protein_family	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229915.peg.1145
YrdC-YciO-Sua5_protein_family	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229915.peg.1910
YrdC-YciO-Sua5_protein_family	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229915.peg.729
YrdC-YciO-Sua5_protein_family	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229915.peg.1914
YrdC-YciO-Sua5_protein_family	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229915.peg.2076
YrdC-YciO-Sua5_protein_family	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229915.peg.157
YrdC-YciO-Sua5_protein_family	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229915.peg.1524
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.229915.peg.299
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.229915.peg.298
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.229915.peg.297
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.229915.peg.296
ar-431-EC_Molybdopterin-guanine_dinucleotide_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.229915.peg.792
ar-431-EC_Molybdopterin-guanine_dinucleotide_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobB	fig|6666666.229915.peg.1383
cAMP_signaling_in_bacteria	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.229915.peg.1320
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229915.peg.947
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229915.peg.2151
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229915.peg.1417
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229915.peg.1977
cAMP_signaling_in_bacteria	Cyclic AMP receptor protein	fig|6666666.229915.peg.682
cAMP_signaling_in_bacteria	bifunctional hemolysin-adenylate cyclase precursor	fig|6666666.229915.peg.1916
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229915.peg.1329
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229915.peg.1330
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229915.peg.1334
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229915.peg.1328
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229915.peg.1947
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229915.peg.1331
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229915.peg.1332
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229915.peg.1329
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229915.peg.1330
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229915.peg.1328
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229915.peg.1947
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229915.peg.1333
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229915.peg.2045
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229915.peg.2047
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.229915.peg.2046
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229915.peg.2044
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229915.peg.2060
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229915.peg.1243
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA	fig|6666666.229915.peg.2089
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229915.peg.1017
mnm5U34_biosynthesis_bacteria	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229915.peg.1282
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusA	fig|6666666.229915.peg.1605
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229915.peg.507
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229915.peg.508
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229915.peg.509
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229915.peg.528
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229915.peg.858
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229915.peg.2078
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229915.peg.224
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229915.peg.670
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229915.peg.1169
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229915.peg.391
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229915.peg.15
pyrimidine_conversions	Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)	fig|6666666.229915.peg.1032
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.229915.peg.566
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229915.peg.1986
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229915.peg.2132
pyrimidine_conversions	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229915.peg.1453
pyrimidine_conversions	Deoxycytidine triphosphate deaminase (EC 3.5.4.13)	fig|6666666.229915.peg.1229
pyrimidine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229915.peg.1256
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229915.peg.43
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229915.peg.2072
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.229915.peg.159
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229915.peg.812
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.229915.peg.893
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229915.peg.651
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229915.peg.953
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48) [C1]	fig|6666666.229915.peg.1230
pyrimidine_conversions	Uridine phosphorylase (EC 2.4.2.3)	fig|6666666.229915.peg.1645
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229915.peg.52
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229915.peg.1059
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229915.peg.1059
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229915.peg.1591
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229915.peg.1260
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.229915.peg.1260
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.639
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.817
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229915.peg.1261
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229915.peg.1353
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229915.peg.1878
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229915.peg.1456
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229915.peg.1149
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229915.peg.292
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229915.peg.1887
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229915.peg.849
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.229915.peg.195
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229915.peg.871
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229915.peg.625
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229915.peg.620
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229915.peg.958
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229915.peg.1057
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229915.peg.659
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.229915.peg.442
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229915.peg.1252
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229915.peg.250
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229915.peg.249
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.229915.peg.1586
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.229915.peg.1376
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229915.peg.1985
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229915.peg.347
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229915.peg.51
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229915.peg.1747
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229915.peg.458
tRNA_modification_Bacteria	Believed to be involved in assembly of Fe-S clusters	fig|6666666.229915.peg.1249
tRNA_modification_Bacteria	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229915.peg.226
tRNA_modification_Bacteria	COG1720: Uncharacterized conserved protein	fig|6666666.229915.peg.935
tRNA_modification_Bacteria	Chaperone protein HscA	fig|6666666.229915.peg.1247
tRNA_modification_Bacteria	Chaperone protein HscB	fig|6666666.229915.peg.1246
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229915.peg.1243
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229915.peg.1986
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229915.peg.811
tRNA_modification_Bacteria	Ferredoxin, 2Fe-2S	fig|6666666.229915.peg.1248
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229915.peg.1598
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229915.peg.1017
tRNA_modification_Bacteria	Iron binding protein IscA for iron-sulfur cluster assembly	fig|6666666.229915.peg.1245
tRNA_modification_Bacteria	Iron-sulfur cluster assembly scaffold protein IscU	fig|6666666.229915.peg.1244
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229915.peg.841
tRNA_modification_Bacteria	Predicted P-loop ATPase fused to an acetyltransferase COG1444	fig|6666666.229915.peg.1351
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.229915.peg.1315
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.229915.peg.444
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229915.peg.443
tRNA_modification_Bacteria	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.27
tRNA_modification_Bacteria	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.188
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229915.peg.1946
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229915.peg.1755
tRNA_modification_Bacteria	hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]	fig|6666666.229915.peg.772
tRNA_modification_Bacteria	tRNA (5-methoxyuridine) 34 synthase	fig|6666666.229915.peg.1222
tRNA_modification_Bacteria	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229915.peg.1282
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229915.peg.719
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229915.peg.1481
tRNA_modification_Bacteria	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	fig|6666666.229915.peg.1886
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusA	fig|6666666.229915.peg.1605
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229915.peg.507
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229915.peg.508
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229915.peg.509
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229915.peg.913
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229915.peg.1521
tRNA_modification_Bacteria	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229915.peg.749
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.311
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.1370
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229915.peg.1741
tRNA_modification_Bacteria	tRNA pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229915.peg.324
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229915.peg.528
tRNA_modification_Bacteria	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229915.peg.246
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229915.peg.2188
tRNA_modification_Bacteria	tRNA-dihydrouridine synthase C (EC 1.-.-.-)	fig|6666666.229915.peg.1486
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229915.peg.1943
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229915.peg.1878
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229915.peg.894
tRNA_modification_Bacteria	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229915.peg.1241
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229915.peg.1973
tRNA_processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.229915.peg.2079
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229915.peg.1013
tRNA_processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.229915.peg.1489
tRNA_processing	Ribonuclease T (EC 3.1.13.-)	fig|6666666.229915.peg.1881
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229915.peg.1521
tRNA_processing	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229915.peg.749
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.311
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229915.peg.1370
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229915.peg.1741
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229915.peg.2188
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229915.peg.1878
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229915.peg.894
tRNAmodification_position_34	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229915.peg.1017
tRNAmodification_position_34	Predicted P-loop ATPase fused to an acetyltransferase COG1444	fig|6666666.229915.peg.1351
tRNAmodification_position_34	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229915.peg.1946
tRNAmodification_position_34	tRNA (5-methoxyuridine) 34 synthase	fig|6666666.229915.peg.1222
tRNAmodification_position_34	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229915.peg.1282
tRNAmodification_position_34	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	fig|6666666.229915.peg.1886
tRNAmodification_position_34	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229915.peg.528
tRNAmodification_position_34	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229915.peg.2188
tRNAmodification_position_34	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229915.peg.1943
tRNAmodification_position_34	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229915.peg.894
tRNAs	tRNA-Ala-GGC	fig|6666666.229915.rna.13
tRNAs	tRNA-Arg-ACG	fig|6666666.229915.rna.2
tRNAs	tRNA-Arg-ACG	fig|6666666.229915.rna.3
tRNAs	tRNA-Arg-CCG	fig|6666666.229915.rna.32
tRNAs	tRNA-Cys-GCA	fig|6666666.229915.rna.35
tRNAs	tRNA-Gly-GCC	fig|6666666.229915.rna.16
tRNAs	tRNA-Gly-GCC	fig|6666666.229915.rna.30
tRNAs	tRNA-Gly-GCC	fig|6666666.229915.rna.36
tRNAs	tRNA-Leu-CAA	fig|6666666.229915.rna.14
tRNAs	tRNA-Leu-CAA	fig|6666666.229915.rna.43
tRNAs	tRNA-Leu-CAG	fig|6666666.229915.rna.19
tRNAs	tRNA-Leu-GAG	fig|6666666.229915.rna.20
tRNAs	tRNA-Phe-GAA	fig|6666666.229915.rna.27
tRNAs	tRNA-Ser-GGA	fig|6666666.229915.rna.4
tRNAs	tRNA-Trp-CCA	fig|6666666.229915.rna.5
tRNAs	tRNA-Val-GAC	fig|6666666.229915.rna.8
