16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229920.peg.167
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229920.peg.168
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.229920.peg.170
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229920.peg.1427
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229920.peg.169
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229920.peg.800
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229920.peg.718
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229920.peg.1451
2-phosphoglycolate_salvage	Putative phosphatase YqaB	fig|6666666.229920.peg.250
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229920.peg.1641
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229920.peg.847
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229920.peg.1504
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229920.peg.1534
5-FCL-like_protein	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229920.peg.1310
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229920.peg.1311
5-FCL-like_protein	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.229920.peg.1631
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229920.peg.1161
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229920.peg.1309
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229920.peg.1007
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229920.peg.365
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229920.peg.1748
ABC_transporter_of_unknown_substrate_X	Possible ABC transporter, periplasmic substrate X binding protein precursor	fig|6666666.229920.peg.305
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, ATP-binding subunit	fig|6666666.229920.peg.342
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, permease subunit I	fig|6666666.229920.peg.341
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, permease subunit II	fig|6666666.229920.peg.340
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229920.peg.437
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229920.peg.438
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229920.peg.1602
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229920.peg.1607
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229920.peg.1608
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229920.peg.1603
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229920.peg.1604
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229920.peg.1605
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229920.peg.1606
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.229920.peg.25
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229920.peg.1102
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.229920.peg.1210
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Outer membrane lipoprotein LolB	fig|6666666.229920.peg.1103
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229920.peg.27
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229920.peg.26
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229920.peg.1101
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	FIG138056: a glutathione-dependent thiol reductase	fig|6666666.229920.peg.1495
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229920.peg.1496
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229920.peg.1359
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229920.peg.1346
A_conserved_operon_linked_to_TyrR_and_possibly_involved_in_virulence	Conserved protein YcjX with nucleoside triphosphate hydrolase domain	fig|6666666.229920.peg.1087
A_conserved_operon_linked_to_TyrR_and_possibly_involved_in_virulence	Membrane protein YcjF	fig|6666666.229920.peg.1088
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.229920.peg.907
Acetoin,_butanediol_metabolism	Acetolactate synthase large subunit (EC 2.2.1.6)	fig|6666666.229920.peg.908
Acyl-CoA_thioesterase_II	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.229920.peg.599
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229920.peg.1151
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229920.peg.1232
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229920.peg.1151
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.229920.peg.1694
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229920.peg.1808
Alanine_biosynthesis	Chaperone protein HscA	fig|6666666.229920.peg.521
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229920.peg.525
Alanine_biosynthesis	Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA	fig|6666666.229920.peg.1487
Alanine_biosynthesis	Ferredoxin, 2Fe-2S	fig|6666666.229920.peg.520
Alanine_biosynthesis	HTH-type transcriptional regulator IlvY	fig|6666666.229920.peg.1045
Alanine_biosynthesis	Iron binding protein IscA for iron-sulfur cluster assembly	fig|6666666.229920.peg.523
Alanine_biosynthesis	Iron-sulfur cluster assembly scaffold protein IscU	fig|6666666.229920.peg.524
Alanine_biosynthesis	Iron-sulfur cluster regulator IscR	fig|6666666.229920.peg.526
Alkylphosphonate_utilization	Alkylphosphonate utilization operon protein PhnA	fig|6666666.229920.peg.935
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229920.peg.661
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229920.peg.1
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229920.peg.1060
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.229920.peg.1399
Aminopeptidases_(EC_3.4.11.-)	Peptidase B (EC 3.4.11.23)	fig|6666666.229920.peg.1903
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229920.peg.844
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229920.peg.1580
Ammonia_assimilation	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.229920.peg.617
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229920.peg.330
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.229920.peg.1999
Ammonia_assimilation	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.229920.peg.731
Anaerobic_respiratory_reductases	Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)	fig|6666666.229920.peg.48
Anaerobic_respiratory_reductases	Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-)	fig|6666666.229920.peg.47
Anaerobic_respiratory_reductases	Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-)	fig|6666666.229920.peg.46
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229920.peg.1191
Anaerobic_respiratory_reductases	Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)	fig|6666666.229920.peg.399
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229920.peg.1217
Archaeal_lipids	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229920.peg.747
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229920.peg.1217
Archaeal_lipids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229920.peg.1217
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229920.peg.1687
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.229920.peg.1925
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.229920.peg.623
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229920.peg.1496
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229920.peg.751
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229920.peg.1687
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.229920.peg.1925
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.229920.peg.623
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229920.peg.1496
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229920.peg.751
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229920.peg.1687
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.229920.peg.749
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229920.peg.750
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229920.peg.751
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, ATP-binding protein ArtP	fig|6666666.229920.peg.1853
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, periplasmic arginine-binding protein ArtI	fig|6666666.229920.peg.1852
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, permease protein ArtM	fig|6666666.229920.peg.1850
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, permease protein ArtQ	fig|6666666.229920.peg.1851
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229920.peg.1687
Arginine_and_Ornithine_Degradation	Arginine/ornithine antiporter ArcD	fig|6666666.229920.peg.749
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229920.peg.750
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229920.peg.1991
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229920.peg.751
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229920.peg.1933
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229920.peg.1191
Arsenic_resistance	Arsenic efflux pump protein	fig|6666666.229920.peg.657
Arsenic_resistance	Arsenic efflux pump protein	fig|6666666.229920.peg.990
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component	fig|6666666.229920.peg.1594
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	fig|6666666.229920.peg.1593
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD	fig|6666666.229920.peg.1592
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	fig|6666666.229920.peg.1591
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)	fig|6666666.229920.peg.1590
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)	fig|6666666.229920.peg.128
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) modifying protein LsrG	fig|6666666.229920.peg.1589
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	LsrR, transcriptional repressor of lsr operon	fig|6666666.229920.peg.129
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229920.peg.2010
Autotransporter_proteins	Immunoglobulin A1 protease	fig|6666666.229920.peg.1889
Autotransporter_proteins	autotransporter domain, T5aSS type secretion	fig|6666666.229920.peg.1889
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229920.peg.1563
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229920.peg.1560
Auxin_biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229920.peg.587
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229920.peg.588
Bacterial_Cell_Division	Cell division protein BolA	fig|6666666.229920.peg.481
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229920.peg.1453
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229920.peg.514
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229920.peg.1633
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229920.peg.167
Bacterial_Cell_Division	Cell division protein FtsJ	fig|6666666.229920.peg.1632
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229920.peg.733
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229920.peg.168
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229920.peg.513
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229920.peg.162
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229920.peg.723
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229920.peg.1223
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229920.peg.515
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.229920.peg.170
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.229920.peg.1224
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229920.peg.1348
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229920.peg.510
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229920.peg.430
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229920.peg.836
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229920.peg.837
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229920.peg.838
Bacterial_Cell_Division	Septum site-determining protein MinC	fig|6666666.229920.peg.1950
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229920.peg.1225
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229920.peg.169
Bacterial_Chemotaxis	Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)	fig|6666666.229920.peg.297
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229920.peg.1
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229920.peg.1453
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229920.peg.514
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229920.peg.167
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229920.peg.733
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229920.peg.168
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229920.peg.513
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229920.peg.162
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229920.peg.515
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.229920.peg.170
Bacterial_Cytoskeleton	Cell division protein ZipA	fig|6666666.229920.peg.548
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229920.peg.836
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229920.peg.837
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229920.peg.838
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229920.peg.1426
Bacterial_Cytoskeleton	Septum site-determining protein MinC	fig|6666666.229920.peg.1950
Bacterial_Cytoskeleton	Z-ring-associated protein ZapA	fig|6666666.229920.peg.846
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229920.peg.733
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229920.peg.944
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ferric uptake regulation protein FUR	fig|6666666.229920.peg.885
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229920.peg.829
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229920.peg.1118
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229920.peg.1013
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229920.peg.339
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229920.peg.777
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229920.peg.553
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229920.peg.1225
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229920.peg.404
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229920.peg.826
Biofilm_Adhesin_Biosynthesis	Biofilm PGA outer membrane secretin PgaA	fig|6666666.229920.peg.221
Biofilm_Adhesin_Biosynthesis	Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-)	fig|6666666.229920.peg.219
Biofilm_Adhesin_Biosynthesis	Biofilm PGA synthesis deacetylase PgaB (EC 3.-)	fig|6666666.229920.peg.220
Biogenesis_of_c-type_cytochromes	ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA	fig|6666666.229920.peg.237
Biogenesis_of_c-type_cytochromes	ABC transporter involved in cytochrome c biogenesis, CcmB subunit	fig|6666666.229920.peg.236
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmF	fig|6666666.229920.peg.232
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmH	fig|6666666.229920.peg.229
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmL	fig|6666666.229920.peg.230
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE	fig|6666666.229920.peg.235
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE	fig|6666666.229920.peg.234
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmE, heme chaperone	fig|6666666.229920.peg.233
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase	fig|6666666.229920.peg.231
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.229920.peg.1914
Biogenesis_of_c-type_cytochromes	Periplasmic thiol:disulfide interchange protein DsbA	fig|6666666.229920.peg.1298
Biogenesis_of_c-type_cytochromes	Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation	fig|6666666.229920.peg.1758
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.229920.peg.412
Biogenesis_of_cytochrome_c_oxidases	Ferredoxin--NADP(+) reductase (EC 1.18.1.2)	fig|6666666.229920.peg.1516
Biogenesis_of_cytochrome_c_oxidases	Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly	fig|6666666.229920.peg.791
Biotin_biosynthesis	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.229920.peg.1818
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229920.peg.61
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229920.peg.1503
Biotin_biosynthesis	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.229920.peg.1819
Biotin_biosynthesis	Biotin synthase (EC 2.8.1.6)	fig|6666666.229920.peg.1274
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.229920.peg.1816
Biotin_biosynthesis	Biotin synthesis protein BioG	fig|6666666.229920.peg.1817
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229920.peg.1339
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229920.peg.127
Biotin_biosynthesis	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229920.peg.1815
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229920.peg.134
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229920.peg.774
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229920.peg.775
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.229920.peg.1818
Biotin_biosynthesis_Experimental	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.229920.peg.1819
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.229920.peg.1274
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.229920.peg.1816
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioG	fig|6666666.229920.peg.1817
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229920.peg.581
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229920.peg.127
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229920.peg.1815
Biotin_biosynthesis_Experimental	NfuA Fe-S protein maturation	fig|6666666.229920.peg.582
Biotin_synthesis_cluster	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.229920.peg.1818
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229920.peg.61
Biotin_synthesis_cluster	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229920.peg.1503
Biotin_synthesis_cluster	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)	fig|6666666.229920.peg.1819
Biotin_synthesis_cluster	Biotin synthase (EC 2.8.1.6)	fig|6666666.229920.peg.1274
Biotin_synthesis_cluster	Biotin synthesis protein BioC	fig|6666666.229920.peg.1816
Biotin_synthesis_cluster	Biotin synthesis protein BioG	fig|6666666.229920.peg.1817
Biotin_synthesis_cluster	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229920.peg.1339
Biotin_synthesis_cluster	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229920.peg.581
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229920.peg.127
Biotin_synthesis_cluster	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229920.peg.1815
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229920.peg.134
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229920.peg.774
Biotin_synthesis_cluster	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229920.peg.775
Biotin_synthesis_cluster	tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)	fig|6666666.229920.peg.273
Biphenyl_Degradation	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229920.peg.1534
Broadly_distributed_proteins_not_in_subsystems	FIG001943: hypothetical protein YajQ	fig|6666666.229920.peg.541
Broadly_distributed_proteins_not_in_subsystems	FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster	fig|6666666.229920.peg.302
Broadly_distributed_proteins_not_in_subsystems	UPF0225 protein YchJ	fig|6666666.229920.peg.59
Broadly_distributed_proteins_not_in_subsystems	UPF0265 protein YeeX	fig|6666666.229920.peg.819
Broadly_distributed_proteins_not_in_subsystems	YciL protein	fig|6666666.229920.peg.1906
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.229920.peg.1764
Broadly_distributed_proteins_not_in_subsystems	YrbA protein	fig|6666666.229920.peg.323
Butanol_Biosynthesis	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229920.peg.1534
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229920.peg.747
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229920.peg.1504
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229920.peg.1534
Butanol_Biosynthesis	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229920.peg.426
Butanol_Biosynthesis	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229920.peg.1145
CBSS-12149.1.peg.3301	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229920.peg.324
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, ATP-binding protein YrbF	fig|6666666.229920.peg.318
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, auxiliary component YrbC	fig|6666666.229920.peg.321
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, periplasmic component YrbD	fig|6666666.229920.peg.320
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, permease component YrbE	fig|6666666.229920.peg.319
CBSS-12149.1.peg.3301	Uncharacterized protein YrbB	fig|6666666.229920.peg.322
CBSS-12149.1.peg.3301	YrbA protein	fig|6666666.229920.peg.323
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229920.peg.1769
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229920.peg.1770
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229920.peg.1768
CBSS-160492.1.peg.550	21 kDa hemolysin precursor	fig|6666666.229920.peg.804
CBSS-160492.1.peg.550	LppC putative lipoprotein	fig|6666666.229920.peg.801
CBSS-160492.1.peg.550	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229920.peg.803
CBSS-160492.1.peg.550	Predicted endonuclease distantly related to archaeal Holliday junction resolvase	fig|6666666.229920.peg.802
CBSS-160492.1.peg.550	rRNA small subunit methyltransferase I	fig|6666666.229920.peg.800
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229920.peg.186
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229920.peg.182
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229920.peg.183
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.229920.peg.835
CBSS-176280.1.peg.1561	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.229920.peg.1196
CBSS-176280.1.peg.1561	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.229920.peg.1777
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.229920.peg.146
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.229920.peg.1366
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.229920.peg.148
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.229920.peg.1367
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.229920.peg.430
CBSS-176299.4.peg.1292	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.229920.peg.1367
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229920.peg.429
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229920.peg.428
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.229920.peg.732
CBSS-196164.1.peg.461	Hypothetical, related to broad specificity phosphatases COG0406	fig|6666666.229920.peg.929
CBSS-208964.1.peg.3826	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229920.peg.1060
CBSS-208964.1.peg.3826	DNA polymerase III chi subunit (EC 2.7.7.7)	fig|6666666.229920.peg.497
CBSS-208964.1.peg.3826	FIG000906: Predicted Permease	fig|6666666.229920.peg.1640
CBSS-208964.1.peg.3826	FIG000988: Predicted permease	fig|6666666.229920.peg.1639
CBSS-208964.1.peg.3826	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229920.peg.499
CBSS-208964.1.peg.3988	DNA polymerase III delta subunit (EC 2.7.7.7)	fig|6666666.229920.peg.425
CBSS-208964.1.peg.3988	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229920.peg.424
CBSS-208964.1.peg.3988	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229920.peg.422
CBSS-211586.1.peg.1979	FIG001881: hydrolase of alkaline phosphatase superfamily	fig|6666666.229920.peg.1845
CBSS-211586.1.peg.1979	FIG002927: hypothetical protein	fig|6666666.229920.peg.1846
CBSS-211586.1.peg.1979	Nucleoid-associated protein NdpA	fig|6666666.229920.peg.1847
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229920.peg.1672
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229920.peg.1673
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229920.peg.1674
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229920.peg.1858
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229920.peg.1671
CBSS-211586.9.peg.2729	Acyl-CoA thioesterase YciA, involved in membrane biogenesis	fig|6666666.229920.peg.1907
CBSS-211586.9.peg.2729	Intracellular septation protein IspA	fig|6666666.229920.peg.1908
CBSS-211586.9.peg.2729	YciL protein	fig|6666666.229920.peg.1906
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229920.peg.1498
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1186
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1324
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1325
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1398
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.229920.peg.1356
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229920.peg.581
CBSS-216591.1.peg.168	Histone acetyltransferase HPA2 and related acetyltransferases	fig|6666666.229920.peg.1648
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229920.peg.27
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229920.peg.26
CBSS-221988.1.peg.1679	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229920.peg.1202
CBSS-221988.1.peg.1679	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229920.peg.1200
CBSS-221988.1.peg.1679	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229920.peg.1199
CBSS-221988.1.peg.1679	FIG003021: Membrane protein	fig|6666666.229920.peg.1254
CBSS-221988.1.peg.1679	Pantothenate:Na+ symporter (TC 2.A.21.1.1)	fig|6666666.229920.peg.1253
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229920.peg.703
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229920.peg.704
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229920.peg.705
CBSS-224911.1.peg.435	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229920.peg.119
CBSS-224911.1.peg.435	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229920.peg.267
CBSS-224911.1.peg.435	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229920.peg.268
CBSS-228400.4.peg.1623	FIG001587: exported protein	fig|6666666.229920.peg.861
CBSS-228400.4.peg.1623	Hypothetical metal-binding enzyme, YcbL homolog	fig|6666666.229920.peg.860
CBSS-228400.4.peg.1623	L,D-transpeptidase YcbB	fig|6666666.229920.peg.862
CBSS-228410.1.peg.134	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.229920.peg.1108
CBSS-228410.1.peg.134	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229920.peg.1212
CBSS-228410.1.peg.134	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229920.peg.1211
CBSS-228410.1.peg.134	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229920.peg.1109
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229920.peg.784
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229920.peg.1867
CBSS-243265.1.peg.198	Transcription elongation factor GreB	fig|6666666.229920.peg.1866
CBSS-243277.1.peg.4359	Protein YcgL	fig|6666666.229920.peg.1949
CBSS-243277.1.peg.4359	YcgN (Fragment)	fig|6666666.229920.peg.716
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229920.peg.1435
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229920.peg.1264
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.229920.peg.1068
CBSS-258594.1.peg.3339	Glycosyltransferase	fig|6666666.229920.peg.441
CBSS-262728.1.peg.1737	Aspartate--ammonia ligase (EC 6.3.1.1)	fig|6666666.229920.peg.1475
CBSS-262728.1.peg.1737	Regulatory protein AsnC	fig|6666666.229920.peg.1188
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229920.peg.1226
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229920.peg.923
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229920.peg.1355
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229920.peg.1226
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229920.peg.923
CBSS-269801.1.peg.2186	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	fig|6666666.229920.peg.263
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229920.peg.1402
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229920.peg.1829
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229920.peg.504
CBSS-290633.1.peg.1906	Mlr7403 protein	fig|6666666.229920.peg.1130
CBSS-291331.3.peg.3674	FIG026291: Hypothetical periplasmic protein	fig|6666666.229920.peg.495
CBSS-292415.3.peg.2341	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229920.peg.1211
CBSS-296591.1.peg.2330	Nucleoside-diphosphate-sugar epimerases	fig|6666666.229920.peg.622
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229920.peg.1033
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229920.peg.951
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229920.peg.730
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229920.peg.143
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229920.peg.145
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229920.peg.966
CBSS-312309.3.peg.1965	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.229920.peg.731
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229920.peg.1191
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229920.peg.1703
CBSS-316057.3.peg.1308	DNA-directed RNA polymerase specialized sigma subunit, sigma24-like	fig|6666666.229920.peg.1864
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.229920.peg.617
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229920.peg.1890
CBSS-316275.9.peg.382	FIG001826: putative inner membrane protein	fig|6666666.229920.peg.832
CBSS-316275.9.peg.382	FIG023911: putative membrane protein	fig|6666666.229920.peg.831
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229920.peg.1151
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229920.peg.1151
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.229920.peg.1659
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.229920.peg.1365
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.229920.peg.140
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229920.peg.793
CBSS-323850.3.peg.3269	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229920.peg.108
CBSS-323850.3.peg.3269	Tyrosine recombinase XerC	fig|6666666.229920.peg.107
CBSS-326442.4.peg.1852	ABC-type polar amino acid transport system, ATPase component	fig|6666666.229920.peg.1291
CBSS-326442.4.peg.1852	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229920.peg.1408
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.229920.peg.795
CBSS-326442.4.peg.1852	Putative TEGT family carrier/transport protein	fig|6666666.229920.peg.1992
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229920.peg.737
CBSS-326442.4.peg.1852	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229920.peg.1289
CBSS-326442.4.peg.1852	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229920.peg.1288
CBSS-326442.4.peg.1852	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229920.peg.1489
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229920.peg.376
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229920.peg.1207
CBSS-339671.5.peg.589	Cell division protein BolA	fig|6666666.229920.peg.481
CBSS-339671.5.peg.589	Hypothetical lipoprotein YajG precursor	fig|6666666.229920.peg.482
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.229920.peg.1108
CBSS-342610.3.peg.1536	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229920.peg.1212
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229920.peg.1211
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229920.peg.1109
CBSS-342610.3.peg.1794	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.229920.peg.1499
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229920.peg.1498
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229920.peg.1788
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229920.peg.556
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229920.peg.557
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229920.peg.510
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229920.peg.837
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229920.peg.838
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229920.peg.1596
CBSS-354.1.peg.876	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229920.peg.410
CBSS-354.1.peg.876	FIG002903: a protein of unknown function perhaps involved in purine metabolism	fig|6666666.229920.peg.411
CBSS-354.1.peg.876	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229920.peg.291
CBSS-364106.7.peg.3204	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229920.peg.119
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229920.peg.1574
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229920.peg.1020
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229920.peg.550
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229920.peg.327
CBSS-393130.3.peg.794	Rhodanese-like domain required for thiamine synthesis	fig|6666666.229920.peg.1807
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229920.peg.754
CBSS-393130.3.peg.794	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229920.peg.1807
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229920.peg.1658
CBSS-498211.3.peg.1415	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229920.peg.1132
CBSS-498211.3.peg.1415	FIG021952: putative membrane protein	fig|6666666.229920.peg.1133
CBSS-498211.3.peg.1415	GTP-binding protein EngA	fig|6666666.229920.peg.504
CBSS-498211.3.peg.1415	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229920.peg.1131
CBSS-498211.3.peg.1415	Mlr7403 protein	fig|6666666.229920.peg.1130
CBSS-498211.3.peg.1415	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229920.peg.1904
CBSS-498211.3.peg.1415	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229920.peg.1135
CBSS-498211.3.peg.1415	Type IV pilus biogenesis protein PilF	fig|6666666.229920.peg.1134
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.402
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.1484
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.1654
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229920.peg.573
CBSS-584.1.peg.1352	FIG009095: D,D-carboxypeptidase family protein	fig|6666666.229920.peg.1497
CBSS-584.1.peg.1352	FIG138056: a glutathione-dependent thiol reductase	fig|6666666.229920.peg.1495
CBSS-584.1.peg.1352	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229920.peg.1496
CBSS-584.1.peg.3382	33 kDa chaperonin (Heat shock protein 33) (HSP33)	fig|6666666.229920.peg.598
CBSS-584.1.peg.3382	FIG001957: putative hydrolase	fig|6666666.229920.peg.596
CBSS-584.1.peg.3382	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229920.peg.78
CBSS-584.1.peg.3382	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229920.peg.597
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229920.peg.1359
CBSS-630.2.peg.3360	Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock)	fig|6666666.229920.peg.1715
CBSS-630.2.peg.3360	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229920.peg.1346
CBSS-630.2.peg.3360	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229920.peg.872
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229920.peg.969
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229920.peg.1132
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229920.peg.167
CBSS-83331.1.peg.3039	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229920.peg.972
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229920.peg.1427
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229920.peg.970
CBSS-83333.1.peg.876	Cell division protein FtsK	fig|6666666.229920.peg.733
CBSS-83333.1.peg.876	FIG065221: Holliday junction DNA helicase	fig|6666666.229920.peg.735
CBSS-83333.1.peg.876	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229920.peg.734
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.229920.peg.1688
CBSS-83333.1.peg.946	DNA transformation protein TfoX	fig|6666666.229920.peg.1258
CBSS-83333.1.peg.946	Inner membrane protein YccF	fig|6666666.229920.peg.898
CBSS-83333.1.peg.946	Methylglyoxal synthase (EC 4.2.3.3)	fig|6666666.229920.peg.899
CBSS-83333.1.peg.946	Putative efflux (PET) family inner membrane protein YccS	fig|6666666.229920.peg.897
CBSS-83333.1.peg.946	UPF0319 protein YccT precursor	fig|6666666.229920.peg.900
CBSS-87626.3.peg.3639	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-)	fig|6666666.229920.peg.179
CBSS-87626.3.peg.3639	FIG001590: Putative conserved exported protein precursor	fig|6666666.229920.peg.845
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229920.peg.844
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229920.peg.830
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229920.peg.829
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.229920.peg.616
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.229920.peg.1336
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.229920.peg.1337
CRISPRs	CRISPR-associated helicase Cas3, Yersinia-type	fig|6666666.229920.peg.1729
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229920.peg.1601
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229920.peg.1730
CRISPRs	CRISPR-associated protein, Cas5d family	fig|6666666.229920.peg.615
CRISPRs	CRISPR-associated protein, Cas5d family	fig|6666666.229920.peg.1373
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229920.peg.1371
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229920.peg.1374
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229920.peg.1375
CRISPRs	CRISPR-associated protein, Csd2 family	fig|6666666.229920.peg.1372
CRISPRs	CRISPR-associated protein, Csd2 family	fig|6666666.229920.peg.1376
CRISPRs	CRISPR-associated protein, Csy1 family	fig|6666666.229920.peg.1725
CRISPRs	CRISPR-associated protein, Csy2 family	fig|6666666.229920.peg.1726
CRISPRs	CRISPR-associated protein, Csy3 family	fig|6666666.229920.peg.1727
CRISPRs	CRISPR-associated protein, Csy4 family	fig|6666666.229920.peg.1728
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229920.peg.585
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229920.peg.432
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229920.peg.1893
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229920.peg.1962
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.229920.peg.913
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229920.peg.1364
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229920.peg.914
Calvin-Benson_cycle	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229920.peg.873
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229920.peg.1452
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.229920.peg.998
Calvin-Benson_cycle	Transketolase, C-terminal section (EC 2.2.1.1)	fig|6666666.229920.peg.894
Calvin-Benson_cycle	Transketolase, N-terminal section (EC 2.2.1.1)	fig|6666666.229920.peg.893
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229920.peg.1207
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229920.peg.9
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229920.peg.1308
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229920.peg.1583
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229920.peg.1793
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229920.peg.8
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229920.peg.1582
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229920.peg.1636
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229920.peg.1794
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229920.peg.1531
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229920.peg.1529
Campylobacter_Iron_Metabolism	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229920.peg.726
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.229920.peg.1716
Campylobacter_Iron_Metabolism	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229920.peg.725
Capsular_heptose_biosynthesis	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229920.peg.803
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229920.peg.954
Carbon_Starvation	Carbon starvation protein A	fig|6666666.229920.peg.171
Carbon_Starvation	Carbon storage regulator	fig|6666666.229920.peg.458
Carbon_Starvation	Starvation lipoprotein Slp paralog	fig|6666666.229920.peg.776
Carbon_Starvation	Stringent starvation protein A	fig|6666666.229920.peg.1048
Carbon_Starvation	Stringent starvation protein B	fig|6666666.229920.peg.1047
Carbon_storage_regulator	Carbon storage regulator	fig|6666666.229920.peg.458
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.229920.peg.930
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229920.peg.1217
Carotenoids	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229920.peg.1217
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229920.peg.1128
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229920.peg.1304
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229920.peg.884
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229920.peg.789
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229920.peg.1305
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229920.peg.1306
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229920.peg.431
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229920.peg.432
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229920.peg.435
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229920.peg.433
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229920.peg.434
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229920.peg.1836
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229920.peg.1453
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229920.peg.1633
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229920.peg.660
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229920.peg.542
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229920.peg.597
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229920.peg.1168
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229920.peg.784
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229920.peg.1867
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229920.peg.577
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229920.peg.1030
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229920.peg.1463
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229920.peg.1071
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.229920.peg.1070
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family	fig|6666666.229920.peg.1209
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229920.peg.1213
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229920.peg.1214
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229920.peg.1557
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229920.peg.1213
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229920.peg.1214
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229920.peg.1557
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229920.peg.1213
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229920.peg.1214
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229920.peg.1557
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)	fig|6666666.229920.peg.1360
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.229920.peg.1361
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229920.peg.1563
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.229920.peg.1565
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.229920.peg.1566
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229920.peg.1560
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229920.peg.666
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229920.peg.665
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229920.peg.1560
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229920.peg.587
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229920.peg.588
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229920.peg.1691
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229920.peg.1202
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229920.peg.827
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229920.peg.1110
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229920.peg.1315
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229920.peg.208
Chorismate_Synthesis	Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229920.peg.1315
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229920.peg.1043
Chorismate_Synthesis	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.229920.peg.1642
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229920.peg.826
Cinnamic_Acid_Degradation	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229920.peg.1534
Citrate_Metabolism,_Transport,_and_Regulation	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25)	fig|6666666.229920.peg.1478
Citrate_Metabolism,_Transport,_and_Regulation	C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)	fig|6666666.229920.peg.814
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase alpha chain (EC 4.1.3.6)	fig|6666666.229920.peg.1479
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.229920.peg.1480
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	fig|6666666.229920.peg.1481
Citrate_Metabolism,_Transport,_and_Regulation	[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	fig|6666666.229920.peg.1482
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.229920.peg.770
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.229920.peg.768
Cluster_Ytf_and_putative_sugar_transporter	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229920.peg.1962
Cluster_Ytf_and_putative_sugar_transporter	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229920.peg.806
Cluster_Ytf_and_putative_sugar_transporter	Uncharacterized protein YtfM precursor	fig|6666666.229920.peg.81
Cluster_Ytf_and_putative_sugar_transporter	Uncharacterized protein YtfN	fig|6666666.229920.peg.80
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229920.peg.457
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229920.peg.1659
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.229920.peg.465
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229920.peg.1043
Cluster_containing_Glutathione_synthetase	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229920.peg.1720
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.229920.peg.465
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229920.peg.463
Cluster_containing_Glutathione_synthetase	UPF0301 protein YqgE	fig|6666666.229920.peg.464
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229920.peg.674
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229920.peg.154
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229920.peg.155
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229920.peg.408
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229920.peg.1294
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.229920.peg.1180
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.229920.peg.788
Coenzyme_A_Biosynthesis	Pantothenate:Na+ symporter (TC 2.A.21.1.1)	fig|6666666.229920.peg.1253
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229920.peg.923
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.229920.peg.565
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.229920.peg.565
Coenzyme_B12_biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229920.peg.86
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229920.peg.1719
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229920.peg.1783
Coenzyme_F420_hydrogenase	Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.229920.peg.700
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1186
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1324
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1325
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1398
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.229920.peg.125
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspD	fig|6666666.229920.peg.2021
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229920.peg.1691
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229920.peg.1202
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229920.peg.827
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229920.peg.1110
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229920.peg.208
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229920.peg.1043
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.229920.peg.1642
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229920.peg.826
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Transcriptional repressor protein TrpR	fig|6666666.229920.peg.1776
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Transcriptional repressor protein TyrR	fig|6666666.229920.peg.1089
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176)	fig|6666666.229920.peg.338
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229920.peg.944
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229920.peg.1402
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229920.peg.687
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229920.peg.830
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229920.peg.829
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229920.peg.979
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229920.peg.1135
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229920.peg.1013
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229920.peg.1452
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229920.peg.1829
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Similar to C-terminal Zn-finger domain of DNA topoisomerase I	fig|6666666.229920.peg.1041
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229920.peg.339
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229920.peg.777
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229920.peg.553
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229920.peg.1384
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229920.peg.1939
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229920.peg.1412
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229920.peg.1610
Copper_homeostasis	Copper chaperone	fig|6666666.229920.peg.1611
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229920.peg.1610
Copper_homeostasis	Cu(I)-responsive transcriptional regulator	fig|6666666.229920.peg.1612
Copper_homeostasis	Cytochrome c heme lyase subunit CcmF	fig|6666666.229920.peg.232
Copper_homeostasis	Cytochrome c heme lyase subunit CcmH	fig|6666666.229920.peg.229
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.229920.peg.1854
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.402
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.1484
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.1654
Creatine_and_Creatinine_Degradation	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229920.peg.1408
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.229920.peg.805
Cysteine_Biosynthesis	Cys regulon transcriptional activator CysB	fig|6666666.229920.peg.1318
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.229920.peg.546
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229920.peg.1939
Cysteine_Biosynthesis	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.229920.peg.7
Cysteine_Biosynthesis	Sulfate transporter, CysZ-type	fig|6666666.229920.peg.547
CytR_regulation	Cyclic AMP receptor protein	fig|6666666.229920.peg.569
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229920.peg.1665
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229920.peg.877
D-Galacturonate_and_D-Glucuronate_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.229920.peg.1944
D-Galacturonate_and_D-Glucuronate_Utilization	D-mannonate oxidoreductase (EC 1.1.1.57)	fig|6666666.229920.peg.879
D-Galacturonate_and_D-Glucuronate_Utilization	Hexuronate utilization operon transcriptional repressor ExuR	fig|6666666.229920.peg.1882
D-Galacturonate_and_D-Glucuronate_Utilization	Mannonate dehydratase (EC 4.2.1.8)	fig|6666666.229920.peg.1883
D-Galacturonate_and_D-Glucuronate_Utilization	Uronate isomerase (EC 5.3.1.12)	fig|6666666.229920.peg.878
D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization	Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	fig|6666666.229920.peg.409
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	D-glycerate transporter (predicted)	fig|6666666.229920.peg.662
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229920.peg.661
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Sugar diacid utilization regulator SdaR	fig|6666666.229920.peg.2029
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	D-glycerate transporter (predicted)	fig|6666666.229920.peg.662
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229920.peg.661
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Sugar diacid utilization regulator SdaR	fig|6666666.229920.peg.2029
D-gluconate_and_ketogluconates_metabolism	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229920.peg.1665
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.229920.peg.1236
D-gluconate_and_ketogluconates_metabolism	Gluconate utilization system Gnt-I transcriptional repressor	fig|6666666.229920.peg.1393
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.229920.peg.1395
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.229920.peg.1019
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.229920.peg.1968
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.229920.peg.124
D-ribose_utilization	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229920.peg.873
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229920.peg.121
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229920.peg.787
D-ribose_utilization	Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)	fig|6666666.229920.peg.120
D-ribose_utilization	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	fig|6666666.229920.peg.123
D-ribose_utilization	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	fig|6666666.229920.peg.1943
D-ribose_utilization	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	fig|6666666.229920.peg.122
D-ribose_utilization	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	fig|6666666.229920.peg.786
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229920.peg.550
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229920.peg.245
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.229920.peg.795
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229920.peg.1412
DNA_Repair_Base_Excision	Exodeoxyribonuclease I (EC 3.1.11.1)	fig|6666666.229920.peg.1892
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.229920.peg.560
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229920.peg.1149
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229920.peg.884
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229920.peg.789
DNA_ligases	DNA ligase (ATP) (EC 6.5.1.1)	fig|6666666.229920.peg.1021
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229920.peg.1058
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229920.peg.375
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.229920.peg.373
DNA_processing_cluster	Protein involved in catabolism of external DNA	fig|6666666.229920.peg.571
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229920.peg.374
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229920.peg.853
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229920.peg.1569
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229920.peg.304
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.229920.peg.835
DNA_repair,_bacterial	DNA mismatch repair endonuclease MutH	fig|6666666.229920.peg.328
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229920.peg.1683
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229920.peg.1684
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.229920.peg.1040
DNA_repair,_bacterial	DNA recombination-dependent growth factor C	fig|6666666.229920.peg.1345
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229920.peg.1038
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229920.peg.1273
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229920.peg.563
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229920.peg.285
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229920.peg.816
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.229920.peg.445
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229920.peg.311
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229920.peg.1218
DNA_repair,_bacterial	Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	fig|6666666.229920.peg.828
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229920.peg.327
DNA_repair,_bacterial	RecA protein	fig|6666666.229920.peg.1001
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.229920.peg.1824
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229920.peg.852
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229920.peg.778
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229920.peg.1094
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229920.peg.1095
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229920.peg.1248
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	fig|6666666.229920.peg.263
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V beta chain (EC 3.1.11.5)	fig|6666666.229920.peg.264
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)	fig|6666666.229920.peg.1014
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229920.peg.790
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229920.peg.1306
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229920.peg.146
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.229920.peg.1001
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229920.peg.374
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229920.peg.852
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229920.peg.1149
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.229920.peg.1001
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.229920.peg.1824
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase Rep	fig|6666666.229920.peg.248
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229920.peg.1020
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229920.peg.1248
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.229920.peg.1001
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.229920.peg.1000
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229920.peg.979
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229920.peg.1128
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229920.peg.1304
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229920.peg.884
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229920.peg.789
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229920.peg.1305
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229920.peg.1306
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229920.peg.597
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.229920.peg.360
DNA_structural_proteins,_bacterial	Chromosome partition protein MukB	fig|6666666.229920.peg.37
DNA_structural_proteins,_bacterial	Chromosome partition protein MukE	fig|6666666.229920.peg.38
DNA_structural_proteins,_bacterial	Chromosome partition protein MukF	fig|6666666.229920.peg.1979
DNA_structural_proteins,_bacterial	DNA-binding protein Fis	fig|6666666.229920.peg.1249
DNA_structural_proteins,_bacterial	DNA-binding protein HU-alpha	fig|6666666.229920.peg.73
DNA_structural_proteins,_bacterial	Integration host factor alpha subunit	fig|6666666.229920.peg.1506
DNA_structural_proteins,_bacterial	Integration host factor beta subunit	fig|6666666.229920.peg.1167
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229920.peg.1402
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229920.peg.375
DNA_topoisomerases,_Type_I,_ATP-independent	Similar to C-terminal Zn-finger domain of DNA topoisomerase I	fig|6666666.229920.peg.1041
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229920.peg.884
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229920.peg.789
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229920.peg.1221
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229920.peg.1788
DNA_uptake_cluster	Competence protein A	fig|6666666.229920.peg.821
DNA_uptake_cluster	Competence protein B	fig|6666666.229920.peg.822
DNA_uptake_cluster	Competence protein C	fig|6666666.229920.peg.823
DNA_uptake_cluster	Competence protein D	fig|6666666.229920.peg.824
DNA_uptake_cluster	Competence protein E	fig|6666666.229920.peg.825
DNA_uptake_cluster	DNA-binding protein HU-alpha	fig|6666666.229920.peg.73
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229920.peg.572
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229920.peg.727
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229920.peg.1905
DNA_uptake_cluster	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.229920.peg.76
DNA_uptake_cluster	NfuA Fe-S protein maturation	fig|6666666.229920.peg.582
DNA_uptake_cluster	Protein involved in catabolism of external DNA	fig|6666666.229920.peg.571
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.229920.peg.1400
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229920.peg.138
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229920.peg.881
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.229920.peg.413
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229920.peg.1126
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229920.peg.413
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229920.peg.1125
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.229920.peg.1662
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.229920.peg.858
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229920.peg.1060
Dehydrogenase_complexes	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229920.peg.1310
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.229920.peg.857
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229920.peg.1309
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose operon repressor, DeoR family	fig|6666666.229920.peg.202
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229920.peg.203
Deoxyribose_and_Deoxynucleoside_Catabolism	Na+ dependent nucleoside transporter NupC	fig|6666666.229920.peg.1231
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229920.peg.1232
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.229920.peg.241
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.229920.peg.124
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.229920.peg.1578
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.229920.peg.1650
Dipeptidases_(EC_3.4.13.-)	Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21)	fig|6666666.229920.peg.1806
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229920.peg.640
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229920.peg.86
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229920.peg.1665
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229920.peg.877
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.229920.peg.1239
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229920.peg.466
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.229920.peg.1395
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.229920.peg.1240
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229920.peg.1364
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229920.peg.914
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229920.peg.1915
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229920.peg.1928
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229920.peg.1588
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229920.peg.1264
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229920.peg.1263
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229920.peg.747
F0F1-type_ATP_synthase	ATP synthase F0 sector subunit b (EC 3.6.3.14)	fig|6666666.229920.peg.191
F0F1-type_ATP_synthase	ATP synthase F0 sector subunit c (EC 3.6.3.14)	fig|6666666.229920.peg.190
F0F1-type_ATP_synthase	ATP synthase alpha chain (EC 3.6.3.14)	fig|6666666.229920.peg.193
F0F1-type_ATP_synthase	ATP synthase beta chain (EC 3.6.3.14)	fig|6666666.229920.peg.195
F0F1-type_ATP_synthase	ATP synthase delta chain (EC 3.6.3.14)	fig|6666666.229920.peg.192
F0F1-type_ATP_synthase	ATP synthase epsilon chain (EC 3.6.3.14)	fig|6666666.229920.peg.196
F0F1-type_ATP_synthase	ATP synthase gamma chain (EC 3.6.3.14)	fig|6666666.229920.peg.194
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59)	fig|6666666.229920.peg.1901
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229920.peg.976
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229920.peg.1435
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)	fig|6666666.229920.peg.292
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.229920.peg.1437
Fatty_Acid_Biosynthesis_FASII	4'-phosphopantetheinyl transferase (EC 2.7.8.-)	fig|6666666.229920.peg.1352
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.229920.peg.1028
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229920.peg.927
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.229920.peg.1434
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229920.peg.1200
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229920.peg.1199
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)	fig|6666666.229920.peg.1389
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.229920.peg.1436
Fermentations:_Lactate	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229920.peg.1534
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229920.peg.1264
Fermentations:_Lactate	D-lactate dehydrogenase (EC 1.1.1.28)	fig|6666666.229920.peg.1704
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229920.peg.1263
Fermentations:_Mixed_acid	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229920.peg.1534
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229920.peg.1264
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229920.peg.1504
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229920.peg.1534
Fermentations:_Mixed_acid	D-lactate dehydrogenase (EC 1.1.1.28)	fig|6666666.229920.peg.1704
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.229920.peg.1146
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229920.peg.1263
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229920.peg.426
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229920.peg.1145
Fermentations:_Mixed_acid	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	fig|6666666.229920.peg.1144
Fermentations:_Mixed_acid	Sugar/maltose fermentation stimulation protein homolog	fig|6666666.229920.peg.1980
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229920.peg.557
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229920.peg.167
Flavodoxin	Flavodoxin 1	fig|6666666.229920.peg.886
Flavodoxin	Flavodoxin 2	fig|6666666.229920.peg.386
Flavodoxin	Flavodoxin 2	fig|6666666.229920.peg.1811
Flavodoxin	Flavoprotein MioC	fig|6666666.229920.peg.1984
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.229920.peg.386
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.229920.peg.1811
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.229920.peg.1261
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229920.peg.1633
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.229920.peg.1761
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.229920.peg.1682
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229920.peg.606
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229920.peg.660
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229920.peg.1030
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229920.peg.1861
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229920.peg.1862
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229920.peg.1863
Formate_dehydrogenase	Formate dehydrogenase N alpha subunit (EC 1.2.1.2)	fig|6666666.229920.peg.395
Formate_dehydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.229920.peg.398
Formate_hydrogenase	Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)	fig|6666666.229920.peg.399
Formate_hydrogenase	Formate dehydrogenase N alpha subunit (EC 1.2.1.2)	fig|6666666.229920.peg.395
Formate_hydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.229920.peg.398
Formate_hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.229920.peg.1392
Formate_hydrogenase	Formate hydrogenlyase subunit 3	fig|6666666.229920.peg.691
Formate_hydrogenase	Formate hydrogenlyase subunit 5	fig|6666666.229920.peg.696
Formate_hydrogenase	Formate hydrogenlyase subunit 6	fig|6666666.229920.peg.697
Formate_hydrogenase	Formate hydrogenlyase subunit 7	fig|6666666.229920.peg.698
Formate_hydrogenase	Formate hydrogenlyase transcriptional activator	fig|6666666.229920.peg.699
Formate_hydrogenase	Hydrogenase-4 component B (EC 1.-.-.-)	fig|6666666.229920.peg.691
Formate_hydrogenase	Hydrogenase-4 component C (EC 1.-.-.-)	fig|6666666.229920.peg.692
Formate_hydrogenase	Hydrogenase-4 component E (EC 1.-.-.-)	fig|6666666.229920.peg.694
Formate_hydrogenase	formate dehydrogenase formation protein FdhE	fig|6666666.229920.peg.631
Fructose_utilization	1-phosphofructokinase (EC 2.7.1.56)	fig|6666666.229920.peg.381
Fructose_utilization	Fructose repressor FruR, LacI family	fig|6666666.229920.peg.1878
Fructose_utilization	Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69)	fig|6666666.229920.peg.380
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.229920.peg.380
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.229920.peg.382
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.229920.peg.382
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229920.peg.392
Fructose_utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229920.peg.391
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.229920.peg.997
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229920.peg.1197
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HybG	fig|6666666.229920.peg.1558
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.229920.peg.1158
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.229920.peg.1159
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.229920.peg.401
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229920.peg.1157
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229920.peg.490
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229920.peg.1991
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1186
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1324
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1325
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1398
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229920.peg.1334
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate--ammonia ligase (EC 6.3.1.1)	fig|6666666.229920.peg.1475
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229920.peg.1370
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229920.peg.1580
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229920.peg.330
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.229920.peg.1137
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system	fig|6666666.229920.peg.1272
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229920.peg.1991
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229920.peg.330
Glutaredoxin_3_containing_cluster	FIG136845: Rhodanese-related sulfurtransferase	fig|6666666.229920.peg.1936
Glutaredoxin_3_containing_cluster	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229920.peg.1938
Glutaredoxin_3_containing_cluster	Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state)	fig|6666666.229920.peg.1937
Glutaredoxins	Cell wall endopeptidase, family M23/M37	fig|6666666.229920.peg.638
Glutaredoxins	Glutaredoxin 1	fig|6666666.229920.peg.491
Glutaredoxins	Glutaredoxin 2	fig|6666666.229920.peg.511
Glutaredoxins	Glutaredoxin-related protein	fig|6666666.229920.peg.42
Glutaredoxins	Glutaredoxin-related protein	fig|6666666.229920.peg.53
Glutaredoxins	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229920.peg.267
Glutathione-dependent_pathway_of_formaldehyde_detoxification	S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284)	fig|6666666.229920.peg.407
Glutathione-dependent_pathway_of_formaldehyde_detoxification	S-formylglutathione hydrolase (EC 3.1.2.12)	fig|6666666.229920.peg.406
Glutathione-regulated_potassium-efflux_system_and_associated_functions	Glutathione-regulated potassium-efflux system ATP-binding protein	fig|6666666.229920.peg.1002
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229920.peg.625
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3)	fig|6666666.229920.peg.1919
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229920.peg.1720
Glutathione:_Non-redox_reactions	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229920.peg.1212
Glutathione:_Non-redox_reactions	Glutathione S-transferase (EC 2.5.1.18)	fig|6666666.229920.peg.1220
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229920.peg.1211
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229920.peg.173
Glutathione:_Redox_cycle	Glutaredoxin 1	fig|6666666.229920.peg.491
Glutathione:_Redox_cycle	Glutaredoxin 2	fig|6666666.229920.peg.511
Glutathione:_Redox_cycle	Glutathione reductase (EC 1.8.1.7)	fig|6666666.229920.peg.570
Glutathionylspermidine_and_Trypanothione	Glutathionylspermidine amidohydrolase (EC 3.5.1.78)	fig|6666666.229920.peg.14
Glutathionylspermidine_and_Trypanothione	Glutathionylspermidine synthase (EC 6.3.1.8)	fig|6666666.229920.peg.14
Glycerate_metabolism	D-glycerate transporter (predicted)	fig|6666666.229920.peg.662
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229920.peg.661
Glycerate_metabolism	Hydroxypyruvate isomerase (EC 5.3.1.22)	fig|6666666.229920.peg.1967
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.229920.peg.667
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229920.peg.1588
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229920.peg.982
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229920.peg.1141
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229920.peg.1434
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein (ACP1)	fig|6666666.229920.peg.102
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein (ACP2)	fig|6666666.229920.peg.101
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY	fig|6666666.229920.peg.1762
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229920.peg.1504
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229920.peg.1534
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229920.peg.528
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229920.peg.981
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8)	fig|6666666.229920.peg.918
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.229920.peg.930
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Diacylglycerol kinase (EC 2.7.1.107)	fig|6666666.229920.peg.149
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229920.peg.661
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)	fig|6666666.229920.peg.500
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229920.peg.799
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229920.peg.1938
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229920.peg.971
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229920.peg.983
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylglycerophosphatase A (EC 3.1.3.27)	fig|6666666.229920.peg.1749
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylglycerophosphatase B (EC 3.1.3.27)	fig|6666666.229920.peg.957
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylserine decarboxylase (EC 4.1.1.65)	fig|6666666.229920.peg.1820
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229920.peg.1007
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229920.peg.874
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229920.peg.875
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229920.peg.661
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229920.peg.1138
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229920.peg.1138
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229920.peg.1112
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229920.peg.540
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229920.peg.1007
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.229920.peg.1139
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229920.peg.737
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229920.peg.1703
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229920.peg.602
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229920.peg.1709
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229920.peg.1268
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229920.peg.1710
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229920.peg.1707
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229920.peg.1708
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229920.peg.1660
Glycogen_metabolism	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229920.peg.1706
Glycogen_metabolism	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229920.peg.1269
Glycogen_metabolism_cluster	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229920.peg.1709
Glycogen_metabolism_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229920.peg.1268
Glycogen_metabolism_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229920.peg.1710
Glycogen_metabolism_cluster	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229920.peg.1707
Glycogen_metabolism_cluster	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229920.peg.1708
Glycogen_metabolism_cluster	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229920.peg.1660
Glycogen_metabolism_cluster	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229920.peg.1706
Glycolate,_glyoxylate_interconversions	Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD	fig|6666666.229920.peg.1065
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.229920.peg.667
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229920.peg.718
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229920.peg.1451
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229920.peg.673
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229920.peg.466
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229920.peg.1893
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229920.peg.1962
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.229920.peg.913
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229920.peg.1695
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229920.peg.1364
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229920.peg.914
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229920.peg.1915
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229920.peg.1928
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229920.peg.1588
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229920.peg.1207
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229920.peg.673
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.229920.peg.466
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229920.peg.1893
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229920.peg.1962
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229920.peg.1695
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229920.peg.914
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229920.peg.1915
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229920.peg.1928
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229920.peg.1588
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229920.peg.1207
Glycyl-tRNA_synthetase	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229920.peg.43
Glycyl-tRNA_synthetase	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229920.peg.586
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229920.peg.146
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229920.peg.430
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229920.peg.43
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229920.peg.586
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.402
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.1484
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.1654
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229920.peg.573
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229920.peg.1117
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229920.peg.389
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229920.peg.388
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229920.peg.1160
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229920.peg.448
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229920.peg.288
HPr_catabolite_repression_system	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229920.peg.391
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229920.peg.389
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229920.peg.388
Heat_shock_dnaK_gene_cluster_extended	FIG001341: Probable Fe(2+)-trafficking protein YggX	fig|6666666.229920.peg.834
Heat_shock_dnaK_gene_cluster_extended	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229920.peg.1720
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229920.peg.288
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229920.peg.870
Heat_shock_dnaK_gene_cluster_extended	RNA polymerase sigma factor RpoH	fig|6666666.229920.peg.1257
Heat_shock_dnaK_gene_cluster_extended	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229920.peg.872
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.229920.peg.139
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229920.peg.463
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.229920.peg.1251
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229920.peg.597
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229920.peg.427
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229920.peg.800
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229920.peg.187
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229920.peg.188
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229920.peg.1531
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229920.peg.1529
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229920.peg.172
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229920.peg.289
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229920.peg.290
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229920.peg.1567
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229920.peg.1568
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229920.peg.1799
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Paraquat-inducible protein A	fig|6666666.229920.peg.867
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Paraquat-inducible protein B	fig|6666666.229920.peg.866
Heme_and_Siroheme_Biosynthesis	Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	fig|6666666.229920.peg.1647
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.229920.peg.1067
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.229920.peg.732
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.229920.peg.1210
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229920.peg.1873
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.229920.peg.84
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.229920.peg.767
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)	fig|6666666.229920.peg.701
Heme_and_Siroheme_Biosynthesis	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229920.peg.872
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.229920.peg.75
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229920.peg.86
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.229920.peg.85
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229920.peg.1529
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229920.peg.172
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229920.peg.289
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229920.peg.290
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229920.peg.1567
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229920.peg.1568
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229920.peg.1799
Hexose_Phosphate_Uptake_System	Hexose phosphate uptake regulatory protein UhpC	fig|6666666.229920.peg.216
Hfl_operon	HflC protein	fig|6666666.229920.peg.1350
Hfl_operon	HflK protein	fig|6666666.229920.peg.1351
Hfl_operon	RNA-binding protein Hfq	fig|6666666.229920.peg.1092
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.229920.peg.1457
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Cof protein, HD superfamily hydrolase	fig|6666666.229920.peg.909
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229920.peg.566
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229920.peg.870
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleotidase YfbR, HD superfamily	fig|6666666.229920.peg.991
Hydrogenases	Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.229920.peg.700
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229920.peg.702
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229920.peg.339
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229920.peg.1861
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229920.peg.1863
Inositol_catabolism	5-deoxy-glucuronate isomerase (EC 5.3.1.-)	fig|6666666.229920.peg.49
Inositol_catabolism	5-keto-2-deoxygluconokinase (EC 2.7.1.92)	fig|6666666.229920.peg.1840
Inositol_catabolism	Epi-inositol hydrolase (EC 3.7.1.-)	fig|6666666.229920.peg.1171
Inositol_catabolism	Inositol transport system ATP-binding protein	fig|6666666.229920.peg.1536
Inositol_catabolism	Inositol transport system permease protein	fig|6666666.229920.peg.1535
Inositol_catabolism	Inositol transport system sugar-binding protein	fig|6666666.229920.peg.1537
Inositol_catabolism	Inositol transport system sugar-binding protein	fig|6666666.229920.peg.1538
Inositol_catabolism	Inosose dehydratase (EC 4.2.1.44)	fig|6666666.229920.peg.1172
Inositol_catabolism	Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)	fig|6666666.229920.peg.1623
Inositol_catabolism	Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)	fig|6666666.229920.peg.1173
Inositol_catabolism	Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18)	fig|6666666.229920.peg.1622
Inositol_catabolism	Predicted transcriptional regulator of the myo-inositol catabolic operon	fig|6666666.229920.peg.1841
Inositol_catabolism	uncharacterized domain	fig|6666666.229920.peg.1840
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229920.peg.132
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229920.peg.1402
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229920.peg.71
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229920.peg.244
Inteins	Translation initiation factor 2	fig|6666666.229920.peg.1770
Intracellular_septation_in_Enterobacteria	Acyl-CoA thioesterase YciA, involved in membrane biogenesis	fig|6666666.229920.peg.1907
Intracellular_septation_in_Enterobacteria	Intracellular septation protein IspA	fig|6666666.229920.peg.1908
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, ATP-binding protein	fig|6666666.229920.peg.1635
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229920.peg.9
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229920.peg.1308
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229920.peg.1583
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229920.peg.1793
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229920.peg.8
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229920.peg.1582
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229920.peg.1636
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229920.peg.1794
Iron_transport_system_including_ABC_transporter	Cytochrome C553 (soluble cytochrome f)	fig|6666666.229920.peg.719
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, ATP-binding subunit	fig|6666666.229920.peg.721
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, permease protein 2	fig|6666666.229920.peg.722
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, substrate binding protein	fig|6666666.229920.peg.724
Iron_transport_system_including_ABC_transporter	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229920.peg.726
Iron_transport_system_including_ABC_transporter	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229920.peg.725
Iron_transport_system_including_ABC_transporter	Possible periplasmic thiredoxin	fig|6666666.229920.peg.720
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229920.peg.1808
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229920.peg.1217
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229920.peg.969
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229920.peg.1216
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229920.peg.1132
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229920.peg.1455
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229920.peg.1454
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229920.peg.1102
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229920.peg.1575
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229920.peg.747
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229920.peg.1217
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229920.peg.970
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229920.peg.1217
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229920.peg.1217
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229920.peg.1217
Isoprenoinds_for_Quinones	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229920.peg.1217
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229920.peg.181
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229920.peg.1217
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229920.peg.970
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.229920.peg.25
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.229920.peg.1511
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.229920.peg.922
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.229920.peg.303
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.229920.peg.977
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.229920.peg.1510
KDO2-Lipid_A_biosynthesis	DNA internalization-related competence protein ComEC/Rec2	fig|6666666.229920.peg.299
KDO2-Lipid_A_biosynthesis	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229920.peg.424
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-)	fig|6666666.229920.peg.211
KDO2-Lipid_A_biosynthesis	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25)	fig|6666666.229920.peg.300
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.229920.peg.978
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.229920.peg.314
KDO2-Lipid_A_biosynthesis	LptA, protein essential for LPS transport across the periplasm	fig|6666666.229920.peg.315
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.229920.peg.301
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.229920.peg.1916
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.229920.peg.975
KDO2-Lipid_A_biosynthesis_cluster_2	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.229920.peg.303
KDO2-Lipid_A_biosynthesis_cluster_2	DNA internalization-related competence protein ComEC/Rec2	fig|6666666.229920.peg.299
KDO2-Lipid_A_biosynthesis_cluster_2	FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster	fig|6666666.229920.peg.302
KDO2-Lipid_A_biosynthesis_cluster_2	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25)	fig|6666666.229920.peg.300
KDO2-Lipid_A_biosynthesis_cluster_2	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.229920.peg.301
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229920.peg.841
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229920.peg.842
L-Arabinose_utilization	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)	fig|6666666.229920.peg.1804
L-ascorbate_utilization_(and_related_gene_clusters)	3-keto-L-gulonate 6-phosphate decarboxylase	fig|6666666.229920.peg.1675
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate utilization transcriptional regulator UlaR, HTH-type	fig|6666666.229920.peg.1628
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	fig|6666666.229920.peg.1676
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate-specific PTS system, EIIC component	fig|6666666.229920.peg.1677
L-ascorbate_utilization_(and_related_gene_clusters)	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)	fig|6666666.229920.peg.1804
L-ascorbate_utilization_(and_related_gene_clusters)	L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-)	fig|6666666.229920.peg.1627
L-ascorbate_utilization_(and_related_gene_clusters)	L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-)	fig|6666666.229920.peg.785
L-ascorbate_utilization_(and_related_gene_clusters)	Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G)	fig|6666666.229920.peg.1629
L-rhamnose_utilization	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229920.peg.1099
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.229920.peg.1196
LOS_core_oligosaccharide_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.229920.peg.922
LOS_core_oligosaccharide_biosynthesis	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)	fig|6666666.229920.peg.11
LOS_core_oligosaccharide_biosynthesis	ADP-heptose synthase (EC 2.7.-.-)	fig|6666666.229920.peg.1485
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229920.peg.13
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229920.peg.925
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229920.peg.1333
LOS_core_oligosaccharide_biosynthesis	Beta-1,4-galactosyltransferase	fig|6666666.229920.peg.1961
LOS_core_oligosaccharide_biosynthesis	D-glycero-beta-D-manno-heptose 7-phosphate kinase	fig|6666666.229920.peg.1485
LOS_core_oligosaccharide_biosynthesis	O-antigen ligase	fig|6666666.229920.peg.911
LOS_core_oligosaccharide_biosynthesis	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229920.peg.803
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229920.peg.1546
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229920.peg.1549
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229920.peg.1548
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229920.peg.1545
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229920.peg.1551
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229920.peg.1550
Lactate_utilization	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229920.peg.1099
Lactate_utilization	L-lactate permease	fig|6666666.229920.peg.820
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229920.peg.1033
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229920.peg.308
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229920.peg.490
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229920.peg.307
Lactose_and_Galactose_Uptake_and_Utilization	Galactose operon repressor, GalR-LacI family of transcriptional regulators	fig|6666666.229920.peg.1745
Lactose_and_Galactose_Uptake_and_Utilization	Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	fig|6666666.229920.peg.306
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229920.peg.295
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229920.peg.296
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)	fig|6666666.229920.peg.297
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	fig|6666666.229920.peg.294
Lactose_and_Galactose_Uptake_and_Utilization	Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)	fig|6666666.229920.peg.1912
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229920.peg.1033
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229920.peg.490
Lactose_utilization	Galactoside O-acetyltransferase (EC 2.3.1.18)	fig|6666666.229920.peg.251
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229920.peg.1808
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229920.peg.1808
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229920.peg.1311
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229920.peg.1421
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229920.peg.539
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.229920.peg.1422
Lipoic_acid_metabolism	Proposed lipoate regulatory protein YbeD	fig|6666666.229920.peg.1423
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.229920.peg.1421
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.229920.peg.1422
Lipoic_acid_synthesis_cluster	Proposed lipoate regulatory protein YbeD	fig|6666666.229920.peg.1423
Lipopolysaccharide_assembly	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229920.peg.424
Lipopolysaccharide_assembly	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.229920.peg.314
Lipopolysaccharide_assembly	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229920.peg.1555
Lipopolysaccharide_assembly	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229920.peg.1554
Lipopolysaccharide_assembly	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229920.peg.1556
Lipopolysaccharide_assembly	LptA, protein essential for LPS transport across the periplasm	fig|6666666.229920.peg.315
Lipopolysaccharide_assembly	Outer membrane lipoprotein LolB	fig|6666666.229920.peg.1103
Lipopolysaccharide_assembly	Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex	fig|6666666.229920.peg.1848
Lipopolysaccharide_assembly	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229920.peg.734
Lipopolysaccharide_assembly	Outer membrane protein H precursor	fig|6666666.229920.peg.974
Lipopolysaccharide_assembly	Outer membrane protein Imp, required for envelope biogenesis	fig|6666666.229920.peg.796
Lipopolysaccharide_assembly	Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL)	fig|6666666.229920.peg.1362
Lipopolysaccharide_assembly	Outer membrane protein assembly factor YaeT precursor	fig|6666666.229920.peg.973
Lipopolysaccharide_assembly	Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB)	fig|6666666.229920.peg.848
Lipopolysaccharide_assembly	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229920.peg.414
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, ATP-binding protein YrbF	fig|6666666.229920.peg.318
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, auxiliary component YrbC	fig|6666666.229920.peg.321
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, periplasmic component YrbD	fig|6666666.229920.peg.320
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, permease component YrbE	fig|6666666.229920.peg.319
Lipopolysaccharide_assembly	Uncharacterized protein YrbK clustered with lipopolysaccharide transporters	fig|6666666.229920.peg.316
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229920.peg.1854
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229920.peg.1574
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229920.peg.117
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229920.peg.1555
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229920.peg.1554
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229920.peg.1556
Lipoprotein_sorting_system	Outer membrane lipoprotein LolB	fig|6666666.229920.peg.1103
Lipoprotein_sorting_system	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229920.peg.734
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229920.peg.976
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.229920.peg.977
Llipid_A_biosynthesis_cluster	FIG053235: Diacylglucosamine hydrolase like	fig|6666666.229920.peg.180
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.229920.peg.978
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.229920.peg.974
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.229920.peg.973
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.229920.peg.1916
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.229920.peg.975
LysR-family_proteins_in_Escherichia_coli	Cys regulon transcriptional activator CysB	fig|6666666.229920.peg.1318
LysR-family_proteins_in_Escherichia_coli	Glycine cleavage system transcriptional activator GcvA	fig|6666666.229920.peg.996
LysR-family_proteins_in_Escherichia_coli	HTH-type transcriptional regulator IlvY	fig|6666666.229920.peg.1045
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.229920.peg.1283
LysR-family_proteins_in_Escherichia_coli	Transcriptional activator MetR	fig|6666666.229920.peg.1803
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	HTH-type transcriptional regulator IlvY	fig|6666666.229920.peg.1045
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.229920.peg.1283
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Transcriptional activator MetR	fig|6666666.229920.peg.1803
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.229920.peg.1319
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.229920.peg.1751
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.229920.peg.1363
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229920.peg.31
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229920.peg.579
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.229920.peg.1356
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229920.peg.793
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229920.peg.108
Lysine_Biosynthesis_DAP_Pathway	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229920.peg.1496
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.229920.peg.1319
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.229920.peg.1751
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.229920.peg.1363
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229920.peg.31
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229920.peg.579
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.229920.peg.1356
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229920.peg.793
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229920.peg.108
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229920.peg.1496
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229920.peg.747
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229920.peg.556
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229920.peg.557
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229920.peg.555
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229920.peg.553
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.402
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.1484
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.1654
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229920.peg.1716
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229920.peg.1686
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229920.peg.1268
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229920.peg.1710
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229920.peg.308
Maltose_and_Maltodextrin_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.229920.peg.1944
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229920.peg.1660
Maltose_and_Maltodextrin_Utilization	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229920.peg.1269
Maltose_and_Maltodextrin_Utilization	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)	fig|6666666.229920.peg.782
Maltose_and_Maltodextrin_Utilization	Maltose operon periplasmic protein MalM	fig|6666666.229920.peg.781
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.229920.peg.3
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.229920.peg.4
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229920.peg.1
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)	fig|6666666.229920.peg.783
Maltose_and_Maltodextrin_Utilization	Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon	fig|6666666.229920.peg.126
Maltose_and_Maltodextrin_Utilization	Periplasmic alpha-amylase (EC 3.2.1.1)	fig|6666666.229920.peg.5
Maltose_and_Maltodextrin_Utilization	Transcriptional activator of maltose regulon, MalT	fig|6666666.229920.peg.1270
Maltose_utilization_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229920.peg.1268
Maltose_utilization_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229920.peg.1710
Maltose_utilization_cluster	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229920.peg.1269
Maltose_utilization_cluster	Transcriptional activator of maltose regulon, MalT	fig|6666666.229920.peg.1270
Mannitol_Utilization	Mannitol operon repressor	fig|6666666.229920.peg.1174
Mannitol_Utilization	Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)	fig|6666666.229920.peg.1175
Mannitol_Utilization	PTS system, mannitol-specific IIA component (EC 2.7.1.69)	fig|6666666.229920.peg.1176
Mannitol_Utilization	PTS system, mannitol-specific IIB component (EC 2.7.1.69)	fig|6666666.229920.peg.1176
Mannitol_Utilization	PTS system, mannitol-specific IIC component (EC 2.7.1.69)	fig|6666666.229920.peg.1176
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229920.peg.392
Mannitol_Utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229920.peg.391
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.229920.peg.282
Mannose_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.229920.peg.1227
Mannose_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.229920.peg.1330
Mannose_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229920.peg.1227
Mannose_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229920.peg.1330
Mannose_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229920.peg.1228
Mannose_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229920.peg.1331
Mannose_Metabolism	PTS system, mannose-specific IID component (EC 2.7.1.69)	fig|6666666.229920.peg.1229
Mannose_Metabolism	PTS system, mannose-specific IID component (EC 2.7.1.69)	fig|6666666.229920.peg.1332
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.229920.peg.459
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229920.peg.1307
Menaquinone_and_Phylloquinone_Biosynthesis	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.229920.peg.654
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.229920.peg.1184
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	fig|6666666.229920.peg.1183
Menaquinone_and_Phylloquinone_Biosynthesis	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.229920.peg.1185
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.229920.peg.1206
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229920.peg.1203
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.229920.peg.206
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229920.peg.1307
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.229920.peg.654
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.229920.peg.1184
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	fig|6666666.229920.peg.1183
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.229920.peg.1185
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.229920.peg.1206
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229920.peg.1203
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.229920.peg.206
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229920.peg.607
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229920.peg.1424
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229920.peg.166
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229920.peg.165
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229920.peg.1641
Methionine_Biosynthesis	Cystathionine beta-lyase (EC 4.4.1.8)	fig|6666666.229920.peg.529
Methionine_Biosynthesis	Cystathionine gamma-synthase (EC 2.5.1.48)	fig|6666666.229920.peg.1705
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.229920.peg.546
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.229920.peg.1876
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.229920.peg.1356
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229920.peg.1355
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.229920.peg.277
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.229920.peg.1963
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.229920.peg.276
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.229920.peg.275
Methionine_Biosynthesis	Methionine repressor MetJ	fig|6666666.229920.peg.461
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229920.peg.1151
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229920.peg.1181
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229920.peg.2010
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229920.peg.1939
Methionine_Biosynthesis	Transcriptional activator MetR	fig|6666666.229920.peg.1803
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229920.peg.277
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229920.peg.1963
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.229920.peg.276
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.229920.peg.275
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229920.peg.1309
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229920.peg.1151
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229920.peg.1181
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229920.peg.2010
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229920.peg.1151
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229920.peg.1211
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229920.peg.173
Methylglyoxal_Metabolism	Methylglyoxal synthase (EC 4.2.3.3)	fig|6666666.229920.peg.899
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229920.peg.1195
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229920.peg.177
Molybdenum_cofactor_biosynthesis	DNA-binding domain of ModE	fig|6666666.229920.peg.989
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229920.peg.606
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229920.peg.956
Molybdenum_cofactor_biosynthesis	Molybdate-binding domain of ModE	fig|6666666.229920.peg.989
Molybdenum_cofactor_biosynthesis	Molybdate-binding domain of ModE	fig|6666666.229920.peg.1722
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.229920.peg.1064
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.229920.peg.1744
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.229920.peg.1052
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.229920.peg.1051
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.229920.peg.1050
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.229920.peg.1049
Molybdenum_cofactor_biosynthesis	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	fig|6666666.229920.peg.1061
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.229920.peg.1062
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.229920.peg.1063
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.229920.peg.1743
Molybdenum_cofactor_biosynthesis	Molybdenum transport system protein ModD	fig|6666666.229920.peg.1741
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis molybdochelatase MogA	fig|6666666.229920.peg.984
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.229920.peg.605
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeB	fig|6666666.229920.peg.604
Molybdenum_cofactor_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.229920.peg.378
Molybdenum_cofactor_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobB	fig|6666666.229920.peg.642
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229920.peg.1203
MukBEF_Chromosome_Condensation	Chromosome partition protein MukB	fig|6666666.229920.peg.37
MukBEF_Chromosome_Condensation	Chromosome partition protein MukE	fig|6666666.229920.peg.38
MukBEF_Chromosome_Condensation	Chromosome partition protein MukF	fig|6666666.229920.peg.1979
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Inner membrane component of tripartite multidrug resistance system	fig|6666666.229920.peg.940
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Membrane fusion component of tripartite multidrug resistance system	fig|6666666.229920.peg.941
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Membrane fusion component of tripartite multidrug resistance system	fig|6666666.229920.peg.942
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Outer membrane component of tripartite multidrug resistance system	fig|6666666.229920.peg.223
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.229920.peg.153
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.229920.peg.1874
Multidrug_Resistance_Efflux_Pumps	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)	fig|6666666.229920.peg.938
Multidrug_Resistance_Efflux_Pumps	Macrolide-specific efflux protein MacA	fig|6666666.229920.peg.939
Multidrug_Resistance_Efflux_Pumps	Membrane fusion protein of RND family multidrug efflux pump	fig|6666666.229920.peg.1643
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229920.peg.613
Multidrug_Resistance_Efflux_Pumps	RND efflux system, outer membrane lipoprotein CmeC	fig|6666666.229920.peg.937
Multidrug_efflux_pump_in_Campylobacter_jejuni_(CmeABC_operon)	RND efflux system, outer membrane lipoprotein CmeC	fig|6666666.229920.peg.937
Murein_Hydrolases	Beta N-acetyl-glucosaminidase (EC 3.2.1.52)	fig|6666666.229920.peg.670
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229920.peg.607
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229920.peg.1424
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-)	fig|6666666.229920.peg.1973
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)	fig|6666666.229920.peg.444
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-)	fig|6666666.229920.peg.833
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229920.peg.1096
Murein_Hydrolases	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	fig|6666666.229920.peg.1775
Murein_hydrolase_regulation_and_cell_death	Antiholin-like protein LrgA	fig|6666666.229920.peg.449
Murein_hydrolase_regulation_and_cell_death	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229920.peg.738
Murein_hydrolase_regulation_and_cell_death	LrgA-associated membrane protein LrgB	fig|6666666.229920.peg.450
Murein_hydrolase_regulation_and_cell_death	LysR family regulatory protein CidR	fig|6666666.229920.peg.385
Murein_hydrolase_regulation_and_cell_death	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229920.peg.376
Murein_hydrolase_regulation_and_cell_death	tRNA-dihydrouridine synthase C (EC 1.-.-.-)	fig|6666666.229920.peg.136
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229920.peg.1544
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229920.peg.35
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229920.peg.1179
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229920.peg.1178
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229920.peg.1177
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229920.peg.1570
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229920.peg.673
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229920.peg.1463
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229920.peg.1033
NADPH:quinone_oxidoreductase_2	NADPH:quinone oxidoreductase 2	fig|6666666.229920.peg.1833
NADPH:quinone_oxidoreductase_2	NADPH:quinone oxidoreductase 2	fig|6666666.229920.peg.1834
NADPH:quinone_oxidoreductase_2	Redox-sensing transcriptional regulator QorR	fig|6666666.229920.peg.40
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229920.peg.1498
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229920.peg.286
NAD_and_NADP_cofactor_biosynthesis_global	NMN 5'-nucleotidase, extracellular (EC 3.1.3.5)	fig|6666666.229920.peg.1738
NAD_and_NADP_cofactor_biosynthesis_global	NMN phosphatase (EC 3.1.3.5)	fig|6666666.229920.peg.1523
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamide phosphoribosyltransferase (EC 2.4.2.12)	fig|6666666.229920.peg.1358
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1)	fig|6666666.229920.peg.708
NAD_and_NADP_cofactor_biosynthesis_global	Ribosyl nicotinamide transporter, PnuC-like	fig|6666666.229920.peg.1382
NAD_and_NADP_cofactor_biosynthesis_global	Ribosylnicotinamide kinase (EC 2.7.1.22)	fig|6666666.229920.peg.708
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.229920.peg.1689
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229920.peg.1690
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229920.peg.1415
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.229920.peg.1413
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.229920.peg.1414
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229920.peg.478
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229920.peg.477
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229920.peg.476
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229920.peg.475
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229920.peg.474
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.229920.peg.473
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Probable exported or periplasmic protein in ApbE locus	fig|6666666.229920.peg.470
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	fig|6666666.229920.peg.1164
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.229920.peg.1163
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)	fig|6666666.229920.peg.1165
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HybG	fig|6666666.229920.peg.1558
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.229920.peg.1158
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.229920.peg.1159
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.229920.peg.401
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HybF	fig|6666666.229920.peg.1034
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229920.peg.1157
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229920.peg.1553
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229920.peg.969
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229920.peg.1216
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229920.peg.1132
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229920.peg.1455
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229920.peg.1454
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229920.peg.1102
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229920.peg.1575
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229920.peg.1407
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP compounds hydrolase NudE (EC 3.6.1.-)	fig|6666666.229920.peg.595
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229920.peg.1498
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229920.peg.119
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229920.peg.566
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.229920.peg.1774
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.229920.peg.76
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229920.peg.1772
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229920.peg.1769
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229920.peg.1771
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229920.peg.1770
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229920.peg.1641
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229920.peg.847
One-carbon_metabolism_by_tetrahydropterines	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.229920.peg.1631
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229920.peg.1161
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229920.peg.1161
Orphan_regulatory_proteins	Copper sensory histidine kinase CpxA	fig|6666666.229920.peg.55
Orphan_regulatory_proteins	Copper-sensing two-component system response regulator CpxR	fig|6666666.229920.peg.1849
Orphan_regulatory_proteins	DNA transformation protein TfoX	fig|6666666.229920.peg.1258
Orphan_regulatory_proteins	Glycine cleavage system transcriptional activator GcvA	fig|6666666.229920.peg.996
Orphan_regulatory_proteins	Sensory histidine kinase QseC	fig|6666666.229920.peg.626
Orphan_regulatory_proteins	Sensory histidine kinase QseC	fig|6666666.229920.peg.627
Orphan_regulatory_proteins	Two-component system response regulator QseB	fig|6666666.229920.peg.628
Orphan_regulatory_proteins	Two-component system response regulator QseB	fig|6666666.229920.peg.629
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229920.peg.54
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229920.peg.1219
Osmotic_stress_cluster	Heat shock (predicted periplasmic) protein YciM, precursor	fig|6666666.229920.peg.880
Osmotic_stress_cluster	Osmotically inducible lipoprotein B precursor	fig|6666666.229920.peg.1340
Osmotic_stress_cluster	Phosphatidylglycerophosphatase B (EC 3.1.3.27)	fig|6666666.229920.peg.957
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.229920.peg.1667
Oxidative_stress	Ferric uptake regulation protein FUR	fig|6666666.229920.peg.885
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.229920.peg.1391
Oxidative_stress	Fumarate and nitrate reduction regulatory protein	fig|6666666.229920.peg.1405
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.229920.peg.1283
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.229920.peg.1391
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229920.peg.1553
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.229920.peg.1391
Oxidative_stress	Paraquat-inducible protein A	fig|6666666.229920.peg.867
Oxidative_stress	Paraquat-inducible protein B	fig|6666666.229920.peg.866
Oxidative_stress	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.229920.peg.349
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.229920.peg.1236
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.229920.peg.1239
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.229920.peg.1240
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229920.peg.873
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229920.peg.1101
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229920.peg.1452
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.229920.peg.997
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.229920.peg.998
Pentose_phosphate_pathway	Transketolase, C-terminal section (EC 2.2.1.1)	fig|6666666.229920.peg.894
Pentose_phosphate_pathway	Transketolase, N-terminal section (EC 2.2.1.1)	fig|6666666.229920.peg.893
Peptide_ABC_transport_system_Sap	Peptide transport periplasmic protein SapA	fig|6666666.229920.peg.1086
Peptide_ABC_transport_system_Sap	Peptide transport system ATP-binding protein SapD	fig|6666666.229920.peg.1083
Peptide_ABC_transport_system_Sap	Peptide transport system ATP-binding protein SapF	fig|6666666.229920.peg.1082
Peptide_ABC_transport_system_Sap	Peptide transport system permease protein SapB	fig|6666666.229920.peg.1085
Peptide_ABC_transport_system_Sap	Peptide transport system permease protein SapC	fig|6666666.229920.peg.1084
Peptide_methionine_sulfoxide_reductase	Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase	fig|6666666.229920.peg.807
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229920.peg.806
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229920.peg.806
Peptide_methionine_sulfoxide_reductase	Thiol:disulfide oxidoreductase associated with MetSO reductase	fig|6666666.229920.peg.808
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229920.peg.167
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229920.peg.159
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229920.peg.607
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229920.peg.1424
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229920.peg.200
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229920.peg.1370
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229920.peg.330
Peptidoglycan_Biosynthesis	Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)	fig|6666666.229920.peg.444
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.229920.peg.1777
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229920.peg.572
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229920.peg.727
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229920.peg.1905
Peptidoglycan_Biosynthesis	Murein-DD-endopeptidase (EC 3.4.99.-)	fig|6666666.229920.peg.1978
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229920.peg.200
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229920.peg.1427
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.229920.peg.164
Peptidoglycan_Biosynthesis	Rare lipoprotein A precursor	fig|6666666.229920.peg.1425
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.229920.peg.1426
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229920.peg.23
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229920.peg.324
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229920.peg.161
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229920.peg.160
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229920.peg.163
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229920.peg.166
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229920.peg.165
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229920.peg.159
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229920.peg.160
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)	fig|6666666.229920.peg.1600
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229920.peg.163
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229920.peg.166
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229920.peg.165
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.229920.peg.537
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.229920.peg.1821
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229920.peg.1286
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229920.peg.1197
Peptidyl-prolyl_cis-trans_isomerase	Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8)	fig|6666666.229920.peg.1385
Peptidyl-prolyl_cis-trans_isomerase	Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)	fig|6666666.229920.peg.1124
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229920.peg.414
Periplasmic_Stress_Response	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229920.peg.972
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229920.peg.974
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegQ, serine protease	fig|6666666.229920.peg.278
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegS	fig|6666666.229920.peg.992
Periplasmic_Stress_Response	Sigma factor RpoE negative regulatory protein RseA	fig|6666666.229920.peg.645
Periplasmic_Stress_Response	Sigma factor RpoE negative regulatory protein RseB precursor	fig|6666666.229920.peg.644
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229920.peg.414
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase	fig|6666666.229920.peg.231
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.229920.peg.1914
Periplasmic_disulfide_interchange	Periplasmic thiol:disulfide interchange protein DsbA	fig|6666666.229920.peg.1298
Periplasmic_disulfide_interchange	Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation	fig|6666666.229920.peg.1758
Periplasmic_disulfide_interchange	Thiol:disulfide interchange protein DsbC	fig|6666666.229920.peg.1148
Persister_Cells	Cell division inhibitor	fig|6666666.229920.peg.1688
Persister_Cells	HipA protein	fig|6666666.229920.peg.1797
Persister_Cells	HipB protein	fig|6666666.229920.peg.1795
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229920.peg.1997
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.229920.peg.1111
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229920.peg.1315
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229920.peg.1315
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57)	fig|6666666.229920.peg.1857
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Transcriptional repressor protein TyrR	fig|6666666.229920.peg.1089
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229920.peg.79
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229920.peg.1457
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.229920.peg.1527
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229920.peg.1056
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.229920.peg.1055
Phosphate_metabolism	Phosphate transport regulator (distant homolog of PhoU)	fig|6666666.229920.peg.1107
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.229920.peg.1106
Phosphoglycerate_mutase_protein_family	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229920.peg.119
Phosphoglycerate_mutase_protein_family	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229920.peg.267
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229920.peg.1915
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229920.peg.1928
Phosphoglycerate_mutase_protein_family	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229920.peg.268
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60)	fig|6666666.229920.peg.90
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] reductase (EC 1.1.1.100)	fig|6666666.229920.peg.89
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] synthase	fig|6666666.229920.peg.104
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like	fig|6666666.229920.peg.91
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Acyl carrier protein (ACP1)	fig|6666666.229920.peg.102
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Acyl carrier protein (ACP2)	fig|6666666.229920.peg.101
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein	fig|6666666.229920.peg.95
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG017861: hypothetical protein	fig|6666666.229920.peg.99
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase	fig|6666666.229920.peg.103
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG021862: membrane protein, exporter	fig|6666666.229920.peg.93
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG027190: Putative transmembrane protein	fig|6666666.229920.peg.94
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG085779: Lipoprotein	fig|6666666.229920.peg.92
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41)	fig|6666666.229920.peg.1969
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG143263: Glycosyl transferase	fig|6666666.229920.peg.97
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase	fig|6666666.229920.peg.98
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase	fig|6666666.229920.peg.100
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Lysophospholipid acyltransferase	fig|6666666.229920.peg.96
Poly-gamma-glutamate_biosynthesis	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229920.peg.625
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229920.peg.1370
Polyadenylation_bacterial	Poly(A) polymerase (EC 2.7.7.19)	fig|6666666.229920.peg.1260
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229920.peg.1118
Polyadenylation_bacterial	RNA-binding protein Hfq	fig|6666666.229920.peg.1092
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229920.peg.1104
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229920.peg.1151
Polyamine_Metabolism	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	fig|6666666.229920.peg.197
Polyamine_Metabolism	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	fig|6666666.229920.peg.739
Polyamine_Metabolism	Arginine/ornithine antiporter ArcD	fig|6666666.229920.peg.749
Polyamine_Metabolism	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229920.peg.750
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229920.peg.742
Polyamine_Metabolism	Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)	fig|6666666.229920.peg.741
Polyamine_Metabolism	Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)	fig|6666666.229920.peg.740
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229920.peg.747
Polyhydroxybutyrate_metabolism	D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)	fig|6666666.229920.peg.1964
Polyhydroxybutyrate_metabolism	Short chain fatty acids transporter	fig|6666666.229920.peg.746
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229920.peg.79
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229920.peg.1457
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229920.peg.1217
Polyprenyl_Diphosphate_Biosynthesis	Geranylgeranyl diphosphate synthase (EC 2.5.1.29)	fig|6666666.229920.peg.1217
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229920.peg.181
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229920.peg.1217
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229920.peg.970
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229920.peg.1286
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229920.peg.1197
Potassium_homeostasis	Glutathione-regulated potassium-efflux system ATP-binding protein	fig|6666666.229920.peg.1002
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.229920.peg.1958
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229920.peg.207
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229920.peg.702
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229920.peg.702
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229920.peg.339
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229920.peg.339
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	LSU ribosomal protein L9p	fig|6666666.229920.peg.1828
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	Primosomal replication protein N	fig|6666666.229920.peg.1826
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	SSU ribosomal protein S18p	fig|6666666.229920.peg.1827
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	SSU ribosomal protein S6p	fig|6666666.229920.peg.1825
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229920.peg.357
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229920.peg.357
Proline,_4-hydroxyproline_uptake_and_utilization	ProQ: influences osmotic activation of compatible solute ProP	fig|6666666.229920.peg.864
Proline,_4-hydroxyproline_uptake_and_utilization	Proline/sodium symporter PutP (TC 2.A.21.2.1)	fig|6666666.229920.peg.509
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.229920.peg.887
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.229920.peg.1822
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.229920.peg.1823
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229920.peg.1991
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229920.peg.1346
Proline_Synthesis	RNA-binding C-terminal domain PUA	fig|6666666.229920.peg.1823
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229920.peg.1263
Proteasome_bacterial	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229920.peg.1468
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229920.peg.1467
Proteasome_bacterial	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229920.peg.1521
Proteasome_bacterial	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229920.peg.1522
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229920.peg.1123
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229920.peg.1900
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.229920.peg.1667
Protection_from_Reactive_Oxygen_Species	Cytochrome c551 peroxidase (EC 1.11.1.5)	fig|6666666.229920.peg.772
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229920.peg.1553
Protection_from_Reactive_Oxygen_Species	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.229920.peg.349
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229920.peg.389
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229920.peg.388
Protein_chaperones	Chaperone protein HscA	fig|6666666.229920.peg.521
Protein_chaperones	Chaperone protein HscB	fig|6666666.229920.peg.522
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229920.peg.1494
Protein_chaperones	ClpB protein	fig|6666666.229920.peg.113
Protein_chaperones	ClpB protein	fig|6666666.229920.peg.1234
Protein_chaperones	ClpB protein	fig|6666666.229920.peg.1235
Protein_chaperones	DnaJ-class molecular chaperone CbpA	fig|6666666.229920.peg.505
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229920.peg.288
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.229920.peg.1196
Protein_deglycation	Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation	fig|6666666.229920.peg.1792
Protein_degradation	Oligopeptidase A (EC 3.4.24.70)	fig|6666666.229920.peg.394
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229920.peg.1468
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229920.peg.1467
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229920.peg.1521
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229920.peg.1522
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229920.peg.1123
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229920.peg.1900
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229920.peg.113
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229920.peg.1234
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229920.peg.1235
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229920.peg.1038
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229920.peg.1273
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegQ, serine protease	fig|6666666.229920.peg.278
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegS	fig|6666666.229920.peg.992
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229920.peg.181
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229920.peg.1217
Purine_Utilization	Guanine-hypoxanthine permease	fig|6666666.229920.peg.1031
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229920.peg.632
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229920.peg.1542
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229920.peg.212
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229920.peg.1036
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229920.peg.410
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.229920.peg.507
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.229920.peg.818
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.229920.peg.1365
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229920.peg.660
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229920.peg.1338
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229920.peg.1904
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229920.peg.1232
Purine_conversions	Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR	fig|6666666.229920.peg.451
Purine_conversions	Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.229920.peg.639
Purine_nucleotide_synthesis_regulator	Purine nucleotide synthesis repressor	fig|6666666.229920.peg.1322
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229920.peg.311
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229920.peg.1218
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229920.peg.1338
Putative_TldE-TldD_proteolytic_complex	FIG138315: Putative alpha helix protein	fig|6666666.229920.peg.658
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229920.peg.1596
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229920.peg.659
Putative_sugar_ABC_transporter_(ytf_cluster)	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229920.peg.1962
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229920.peg.806
Putative_sugar_ABC_transporter_(ytf_cluster)	Uncharacterized protein YtfM precursor	fig|6666666.229920.peg.81
Putative_sugar_ABC_transporter_(ytf_cluster)	Uncharacterized protein YtfN	fig|6666666.229920.peg.80
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229920.peg.1216
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229920.peg.874
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229920.peg.875
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229920.peg.1364
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229920.peg.1112
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.229920.peg.1029
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.229920.peg.215
Pyrimidine_utilization	Uracil permease	fig|6666666.229920.peg.1126
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.229920.peg.1694
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229920.peg.1808
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229920.peg.1138
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229920.peg.1138
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.229920.peg.1139
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229920.peg.1552
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	fig|6666666.229920.peg.1164
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.229920.peg.1163
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)	fig|6666666.229920.peg.1165
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229920.peg.78
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229920.peg.1588
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229920.peg.1534
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229920.peg.1264
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.229920.peg.901
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229920.peg.1310
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	fig|6666666.229920.peg.1311
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229920.peg.512
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229920.peg.1263
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229920.peg.1309
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229920.peg.606
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8)	fig|6666666.229920.peg.1385
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229920.peg.184
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229920.peg.185
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229920.peg.933
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229920.peg.934
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229920.peg.1143
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229920.peg.88
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.229920.peg.1502
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.229920.peg.2005
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229920.peg.2004
Queuosine-Archaeosine_Biosynthesis	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229920.peg.872
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229920.peg.1858
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229920.peg.1671
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229920.peg.1202
RNA_methylation	16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176)	fig|6666666.229920.peg.338
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229920.peg.1226
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.229920.peg.147
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-)	fig|6666666.229920.peg.671
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-)	fig|6666666.229920.peg.672
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)	fig|6666666.229920.peg.362
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229920.peg.663
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229920.peg.1428
RNA_methylation	LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM	fig|6666666.229920.peg.995
RNA_methylation	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229920.peg.1632
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229920.peg.1135
RNA_methylation	Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52)	fig|6666666.229920.peg.1011
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229920.peg.463
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229920.peg.415
RNA_methylation	hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]	fig|6666666.229920.peg.917
RNA_methylation	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229920.peg.291
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229920.peg.840
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.229920.peg.1381
RNA_methylation	tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)	fig|6666666.229920.peg.273
RNA_methylation	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229920.peg.1300
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229920.peg.469
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229920.peg.431
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229920.peg.1836
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229920.peg.431
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229920.peg.432
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229920.peg.435
RNA_modification_cluster	Protein YidD	fig|6666666.229920.peg.433
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229920.peg.434
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229920.peg.753
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229920.peg.1544
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229920.peg.35
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.229920.peg.1366
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.229920.peg.664
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.229920.peg.1986
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229920.peg.510
RNA_processing_and_degradation,_bacterial	Exoribonuclease II (EC 3.1.13.1)	fig|6666666.229920.peg.1390
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.229920.peg.1756
RNA_processing_and_degradation,_bacterial	Ribonuclease E inhibitor RraA	fig|6666666.229920.peg.655
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229920.peg.429
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.932
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.1383
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229920.peg.1317
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229920.peg.1702
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229920.peg.849
RNA_pseudouridine_syntheses	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.240
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.259
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.1685
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229920.peg.1768
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229920.peg.1884
Rcs_phosphorelay_signal_transduction_pathway	DnaJ-like protein DjlA	fig|6666666.229920.peg.137
RecA_and_RecX	RecA protein	fig|6666666.229920.peg.1001
RecA_and_RecX	Regulatory protein RecX	fig|6666666.229920.peg.1000
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229920.peg.640
Recycling_of_Peptidoglycan_Amino_Acids	AmpG permease	fig|6666666.229920.peg.1035
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229920.peg.1096
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD	fig|6666666.229920.peg.298
Recycling_of_Peptidoglycan_Amino_Acids	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)	fig|6666666.229920.peg.1600
Recycling_of_Peptidoglycan_Amino_Sugars	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-)	fig|6666666.229920.peg.199
Recycling_of_Peptidoglycan_Amino_Sugars	Beta N-acetyl-glucosaminidase (EC 3.2.1.52)	fig|6666666.229920.peg.670
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229920.peg.884
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229920.peg.789
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229920.peg.1221
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229920.peg.1788
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229920.peg.799
Respiratory_dehydrogenases_1	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229920.peg.1099
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229920.peg.798
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229920.peg.987
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229920.peg.1805
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229920.peg.2007
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229920.peg.2008
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229920.peg.985
Rhamnose_containing_glycans	DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase	fig|6666666.229920.peg.440
Rhamnose_containing_glycans	DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase	fig|6666666.229920.peg.446
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229920.peg.952
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229920.peg.1033
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229920.peg.954
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.229920.peg.953
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229920.peg.951
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229920.peg.157
Riboflavin,_FMN_and_FAD_metabolism	5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase	fig|6666666.229920.peg.106
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229920.peg.993
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229920.peg.1746
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229920.peg.993
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229920.peg.536
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229920.peg.956
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229920.peg.536
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229920.peg.612
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229920.peg.157
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase	fig|6666666.229920.peg.106
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229920.peg.993
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229920.peg.1746
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229920.peg.993
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229920.peg.1114
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229920.peg.536
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229920.peg.956
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229920.peg.613
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229920.peg.536
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229920.peg.612
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229920.peg.291
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229920.peg.1768
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229920.peg.157
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229920.peg.993
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229920.peg.1746
Riboflavin_synthesis_cluster	Diacylglycerol kinase (EC 2.7.1.107)	fig|6666666.229920.peg.149
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229920.peg.993
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229920.peg.956
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229920.peg.798
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229920.peg.881
Riboflavin_synthesis_cluster	Phosphatidylglycerophosphatase A (EC 3.1.3.27)	fig|6666666.229920.peg.1749
Riboflavin_synthesis_cluster	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.229920.peg.583
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229920.peg.612
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229920.peg.1452
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229920.peg.1748
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.229920.peg.1747
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229920.peg.1109
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229920.peg.979
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229920.peg.979
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229920.peg.242
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229920.peg.244
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229920.peg.1586
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229920.peg.1587
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229920.peg.1754
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.229920.peg.994
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229920.peg.1195
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229920.peg.1179
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229920.peg.760
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.229920.peg.1449
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.229920.peg.755
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.229920.peg.1179
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.229920.peg.756
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.229920.peg.764
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.229920.peg.764
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.229920.peg.1182
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.229920.peg.842
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.229920.peg.1439
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.229920.peg.1827
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.229920.peg.1827
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.229920.peg.1444
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.229920.peg.1168
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.229920.peg.538
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.229920.peg.555
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.229920.peg.143
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.229920.peg.1442
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.229920.peg.754
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.229920.peg.760
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.229920.peg.1825
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.229920.peg.1178
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.229920.peg.763
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.229920.peg.260
Ribosome_activity_modulation	Ribosome hibernation protein YfiA	fig|6666666.229920.peg.1920
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229920.peg.841
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229920.peg.1428
Ribosome_biogenesis_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.229920.peg.1756
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.932
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.1383
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229920.peg.1702
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229920.peg.849
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.229920.peg.1251
Ribosome_biogenesis_bacterial	Ribosomal protein S6 glutaminyl transferase	fig|6666666.229920.peg.493
Ribosome_biogenesis_bacterial	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229920.peg.1013
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229920.peg.415
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229920.peg.777
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229920.peg.840
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229920.peg.968
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229920.peg.143
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229920.peg.145
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229920.peg.966
Rrf2_family_transcriptional_regulators	Iron-sulfur cluster regulator IscR	fig|6666666.229920.peg.526
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229920.peg.1114
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229920.peg.1597
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229920.peg.1598
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	HflC protein	fig|6666666.229920.peg.1350
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	HflK protein	fig|6666666.229920.peg.1351
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229920.peg.518
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229920.peg.1858
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like	fig|6666666.229920.peg.517
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229920.peg.1097
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229920.peg.1671
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.229920.peg.650
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229920.peg.343
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.229920.peg.651
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229920.peg.1861
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229920.peg.1863
Septum_site-determining_cluster_Min	Septum site-determining protein MinC	fig|6666666.229920.peg.1950
Serine-glyoxylate_cycle	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229920.peg.1641
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229920.peg.847
Serine-glyoxylate_cycle	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229920.peg.747
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.229920.peg.466
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229920.peg.661
Serine-glyoxylate_cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229920.peg.1117
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229920.peg.1161
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229920.peg.1161
Serine-glyoxylate_cycle	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229920.peg.78
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229920.peg.1007
Serine-glyoxylate_cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229920.peg.366
Serine-glyoxylate_cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229920.peg.365
Serine-glyoxylate_cycle	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	fig|6666666.229920.peg.854
Serine-glyoxylate_cycle	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	fig|6666666.229920.peg.855
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229920.peg.874
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229920.peg.875
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229920.peg.1112
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229920.peg.540
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229920.peg.540
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229920.peg.1007
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229920.peg.1574
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229920.peg.437
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229920.peg.438
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229920.peg.1602
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229920.peg.71
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229920.peg.200
Sialic_Acid_Metabolism	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229920.peg.1071
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229920.peg.200
Sialic_Acid_Metabolism	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.229920.peg.1070
Sialic_Acid_Metabolism	N-acetylmannosamine kinase (EC 2.7.1.60)	fig|6666666.229920.peg.1074
Sialic_Acid_Metabolism	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)	fig|6666666.229920.peg.1075
Sialic_Acid_Metabolism	N-acetylneuraminate lyase (EC 4.1.3.3)	fig|6666666.229920.peg.1072
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229920.peg.1213
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229920.peg.1214
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229920.peg.1557
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229920.peg.1213
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229920.peg.1214
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229920.peg.1557
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229920.peg.1213
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229920.peg.1214
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229920.peg.1557
Sialic_Acid_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.229920.peg.1227
Sialic_Acid_Metabolism	PTS system, mannose-specific IIA component (EC 2.7.1.69)	fig|6666666.229920.peg.1330
Sialic_Acid_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229920.peg.1227
Sialic_Acid_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229920.peg.1330
Sialic_Acid_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229920.peg.1228
Sialic_Acid_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229920.peg.1331
Sialic_Acid_Metabolism	PTS system, mannose-specific IID component (EC 2.7.1.69)	fig|6666666.229920.peg.1229
Sialic_Acid_Metabolism	PTS system, mannose-specific IID component (EC 2.7.1.69)	fig|6666666.229920.peg.1332
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229920.peg.266
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229920.peg.1681
Sialic_Acid_Metabolism	Putative sugar isomerase involved in processing of exogenous sialic acid	fig|6666666.229920.peg.1940
Sialic_Acid_Metabolism	Sialic acid utilization regulator, RpiR family	fig|6666666.229920.peg.1073
Sialic_Acid_Metabolism	Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase	fig|6666666.229920.peg.1078
Sialic_Acid_Metabolism	TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter	fig|6666666.229920.peg.1077
Sialic_Acid_Metabolism	TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein	fig|6666666.229920.peg.1076
Sialic_Acid_Metabolism	TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter	fig|6666666.229920.peg.1077
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229920.peg.1574
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229920.peg.428
Single-Rhodanese-domain_proteins	Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1)	fig|6666666.229920.peg.1699
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome C553 (soluble cytochrome f)	fig|6666666.229920.peg.719
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.229920.peg.535
Soluble_cytochromes_and_functionally_related_electron_carriers	Ferredoxin	fig|6666666.229920.peg.1752
Soluble_cytochromes_and_functionally_related_electron_carriers	Ferredoxin, 2Fe-2S	fig|6666666.229920.peg.520
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229920.peg.542
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.229920.peg.818
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229920.peg.1160
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.229920.peg.275
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229920.peg.1827
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229920.peg.187
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229920.peg.188
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229920.peg.1455
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229920.peg.1454
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.229920.peg.1457
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229920.peg.1453
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229920.peg.168
Stationary_phase_repair_cluster	FIG139438: lipoprotein B	fig|6666666.229920.peg.1458
Stationary_phase_repair_cluster	Lipoprotein NlpD	fig|6666666.229920.peg.1460
Stationary_phase_repair_cluster	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229920.peg.1456
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.229920.peg.148
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.229920.peg.1367
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.229920.peg.1367
Succinate_dehydrogenase	Fumarate reductase subunit C	fig|6666666.229920.peg.364
Succinate_dehydrogenase	Fumarate reductase subunit D	fig|6666666.229920.peg.363
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229920.peg.366
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229920.peg.365
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229920.peg.1290
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229920.peg.1289
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229920.peg.1288
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229920.peg.1711
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229920.peg.1712
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.229920.peg.858
TCA_Cycle	Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	fig|6666666.229920.peg.1481
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229920.peg.1311
TCA_Cycle	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	fig|6666666.229920.peg.1311
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.229920.peg.857
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.229920.peg.496
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229920.peg.1117
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229920.peg.366
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229920.peg.365
TCA_Cycle	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	fig|6666666.229920.peg.854
TCA_Cycle	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	fig|6666666.229920.peg.855
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, large permease component	fig|6666666.229920.peg.527
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, periplasmic component	fig|6666666.229920.peg.1664
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229920.peg.1454
Tellurite_resistance:_Chromosomal_determinants	Tellurite resistance protein TehB	fig|6666666.229920.peg.1271
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.229920.peg.943
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229920.peg.944
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229920.peg.600
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229920.peg.601
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229920.peg.1280
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.229920.peg.943
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229920.peg.944
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229920.peg.600
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229920.peg.601
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229920.peg.1280
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229920.peg.1177
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229920.peg.1177
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229920.peg.1216
Thiamin_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229920.peg.525
Thiamin_biosynthesis	Rhodanese-like domain required for thiamine synthesis	fig|6666666.229920.peg.1807
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229920.peg.1275
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229920.peg.1637
Thiamin_biosynthesis	Thiamin ABC transporter, substrate-binding component	fig|6666666.229920.peg.1277
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229920.peg.1276
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229920.peg.1748
Thiamin_biosynthesis	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229920.peg.1807
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.229920.peg.1283
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229920.peg.1890
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.229920.peg.1068
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229920.peg.602
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229920.peg.1264
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229920.peg.1263
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.229920.peg.1139
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1186
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1324
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1325
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229920.peg.1398
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229920.peg.31
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229920.peg.579
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.229920.peg.1356
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.229920.peg.1356
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229920.peg.1355
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229920.peg.1353
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.229920.peg.945
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.229920.peg.1530
Ton_and_Tol_transport_systems	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229920.peg.1531
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229920.peg.1529
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.229920.peg.946
Ton_and_Tol_transport_systems	Peptidoglycan-associated lipoprotein precursor	fig|6666666.229920.peg.950
Ton_and_Tol_transport_systems	Tol biopolymer transport system, TolR protein	fig|6666666.229920.peg.947
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229920.peg.948
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229920.peg.1491
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229920.peg.1492
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229920.peg.1784
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229920.peg.1785
Ton_and_Tol_transport_systems	tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins	fig|6666666.229920.peg.949
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229920.peg.816
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229920.peg.714
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229920.peg.920
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229920.peg.1561
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229920.peg.713
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229920.peg.919
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229920.peg.1562
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229920.peg.256
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229920.peg.2002
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229920.peg.258
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229920.peg.2001
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229920.peg.817
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229920.peg.1025
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229920.peg.1024
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229920.peg.1772
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229920.peg.784
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229920.peg.1867
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229920.peg.1550
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229920.peg.608
Transcription_factors_bacterial	Transcription elongation factor GreB	fig|6666666.229920.peg.1866
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229920.peg.1431
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229920.peg.1771
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229920.peg.1747
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229920.peg.577
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229920.peg.557
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoE	fig|6666666.229920.peg.646
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoH	fig|6666666.229920.peg.1257
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE negative regulatory protein RseA	fig|6666666.229920.peg.645
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE negative regulatory protein RseB precursor	fig|6666666.229920.peg.644
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE regulatory protein RseC	fig|6666666.229920.peg.643
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229920.peg.1191
Transcription_repair_cluster	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229920.peg.200
Transcription_repair_cluster	LSU ribosomal protein L25p	fig|6666666.229920.peg.1976
Transcription_repair_cluster	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229920.peg.200
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229920.peg.542
Transcription_repair_cluster	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229920.peg.1101
Transcription_repair_cluster	Transcription-repair coupling factor	fig|6666666.229920.peg.577
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229920.peg.1177
Translation_elongation_factor_P_lysylation	Lysyl-lysine 2,3-aminomutase	fig|6666666.229920.peg.1342
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.229920.peg.1341
Translation_elongation_factor_P_lysylation	Translation elongation factor P Lys34:lysine transferase	fig|6666666.229920.peg.367
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229920.peg.1177
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.229920.peg.427
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.229920.peg.1341
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.229920.peg.145
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229920.peg.1570
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229920.peg.830
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229920.peg.1769
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229920.peg.1855
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229920.peg.1770
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229920.peg.1539
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.229920.peg.882
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229920.peg.730
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229920.peg.27
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229920.peg.357
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.229920.peg.620
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229920.peg.829
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229920.peg.542
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229920.peg.26
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229920.peg.968
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229920.peg.187
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229920.peg.188
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229920.peg.1155
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229920.peg.1156
Transport_of_Nickel_and_Cobalt	Additional component NikL of nickel ECF transporter	fig|6666666.229920.peg.1153
Transport_of_Nickel_and_Cobalt	Additional periplasmic component NikK of nickel ECF transporter	fig|6666666.229920.peg.1152
Transport_of_Nickel_and_Cobalt	Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)	fig|6666666.229920.peg.1520
Transport_of_Nickel_and_Cobalt	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229920.peg.1154
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229920.peg.703
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229920.peg.704
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229920.peg.705
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229920.peg.702
Transport_system_clustering_with_HemG	Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)	fig|6666666.229920.peg.701
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229920.peg.1709
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229920.peg.1708
Trehalose_Uptake_and_Utilization	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)	fig|6666666.229920.peg.782
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229920.peg.1246
Triacylglycerol_metabolism	Lysophospholipase L2 (EC 3.1.1.5)	fig|6666666.229920.peg.910
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229920.peg.1563
Tryptophan_synthesis	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.229920.peg.1565
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.229920.peg.1566
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229920.peg.1560
Tryptophan_synthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229920.peg.666
Tryptophan_synthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229920.peg.665
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229920.peg.1560
Tryptophan_synthesis	Transcriptional repressor protein TrpR	fig|6666666.229920.peg.1776
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229920.peg.587
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229920.peg.588
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.229920.peg.770
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.229920.peg.769
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.229920.peg.768
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.229920.peg.171
Type_IV_pilus	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229920.peg.827
Type_IV_pilus	Leader peptidase (Prepilin peptidase) (EC 3.4.23.43)	fig|6666666.229920.peg.680
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229920.peg.572
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229920.peg.727
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229920.peg.1905
Type_IV_pilus	N-methyltransferase (EC 2.1.1.-)	fig|6666666.229920.peg.680
Type_IV_pilus	Type IV fimbrial assembly protein PilC	fig|6666666.229920.peg.679
Type_IV_pilus	Type IV fimbrial assembly, ATPase PilB	fig|6666666.229920.peg.678
Type_IV_pilus	Type IV pilin PilA	fig|6666666.229920.peg.677
Type_IV_pilus	Type IV pilus biogenesis protein PilM	fig|6666666.229920.peg.821
Type_IV_pilus	Type IV pilus biogenesis protein PilN	fig|6666666.229920.peg.822
Type_IV_pilus	Type IV pilus biogenesis protein PilQ	fig|6666666.229920.peg.824
Type_IV_pilus	Type IV pilus biogenesis protein PilQ	fig|6666666.229920.peg.825
Type_VI_secretion_systems	ClpB protein	fig|6666666.229920.peg.113
Type_VI_secretion_systems	ClpB protein	fig|6666666.229920.peg.1234
Type_VI_secretion_systems	ClpB protein	fig|6666666.229920.peg.1235
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229920.peg.71
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229920.peg.200
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229920.peg.200
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229920.peg.266
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229920.peg.1681
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229920.peg.23
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229920.peg.324
USS-DB-7	ClpB protein	fig|6666666.229920.peg.113
USS-DB-7	ClpB protein	fig|6666666.229920.peg.1234
USS-DB-7	ClpB protein	fig|6666666.229920.peg.1235
Ubiquinone_Biosynthesis	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-)	fig|6666666.229920.peg.179
Ubiquinone_Biosynthesis	Chorismate--pyruvate lyase (EC 4.1.3.40)	fig|6666666.229920.peg.1369
Ubiquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229920.peg.1307
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229920.peg.543
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229920.peg.504
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229920.peg.270
Universal_GTPases	GTP-binding protein Era	fig|6666666.229920.peg.430
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229920.peg.186
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.229920.peg.1147
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229920.peg.431
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229920.peg.1987
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229920.peg.1225
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229920.peg.404
Universal_GTPases	Translation elongation factor G	fig|6666666.229920.peg.1177
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229920.peg.427
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229920.peg.1570
Universal_GTPases	Translation initiation factor 2	fig|6666666.229920.peg.1770
Universal_stress_protein_family	Universal stress protein A	fig|6666666.229920.peg.456
Universal_stress_protein_family	Universal stress protein E	fig|6666666.229920.peg.1404
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229920.peg.806
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.229920.peg.733
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.229920.peg.1662
Uptake_of_selenate_and_selenite	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.229920.peg.7
Utilization_of_glutathione_as_a_sulphur_source	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229920.peg.625
VC0266	Hypothetical protein VC0266 (sugar utilization related?)	fig|6666666.229920.peg.544
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229920.peg.1808
Xylose_utilization	D-xylose transport ATP-binding protein XylG	fig|6666666.229920.peg.333
Xylose_utilization	Xylose ABC transporter, periplasmic xylose-binding protein XylF	fig|6666666.229920.peg.334
Xylose_utilization	Xylose ABC transporter, permease protein XylH	fig|6666666.229920.peg.331
Xylose_utilization	Xylose ABC transporter, permease protein XylH	fig|6666666.229920.peg.332
Xylose_utilization	Xylose ABC transporter, permease protein XylH	fig|6666666.229920.peg.1323
Xylose_utilization	Xylose activator XylR (AraC family)	fig|6666666.229920.peg.1327
Xylose_utilization	Xylose isomerase (EC 5.3.1.5)	fig|6666666.229920.peg.335
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229920.peg.336
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229920.peg.1656
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.229920.peg.241
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229920.peg.777
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229920.peg.553
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229920.peg.777
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229920.peg.1097
YrdC-YciO-Sua5_protein_family	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229920.peg.1401
YrdC-YciO-Sua5_protein_family	Hypothetical YciO protein, TsaC/YrdC paralog	fig|6666666.229920.peg.1316
YrdC-YciO-Sua5_protein_family	Peptide chain release factor 1	fig|6666666.229920.peg.27
YrdC-YciO-Sua5_protein_family	Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p	fig|6666666.229920.peg.895
YrdC-YciO-Sua5_protein_family	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229920.peg.26
YrdC-YciO-Sua5_protein_family	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229920.peg.1013
YrdC-YciO-Sua5_protein_family	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229920.peg.1829
YrdC-YciO-Sua5_protein_family	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229920.peg.1007
YrdC-YciO-Sua5_protein_family	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229920.peg.777
YrdC-YciO-Sua5_protein_family	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229920.peg.553
YrdC-YciO-Sua5_protein_family	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229920.peg.1097
Zinc_regulated_enzymes	C4-type zinc finger protein, DksA/TraR family	fig|6666666.229920.peg.1259
Zinc_regulated_enzymes	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.229920.peg.805
Zinc_regulated_enzymes	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229920.peg.1384
Zinc_regulated_enzymes	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229920.peg.606
Zinc_regulated_enzymes	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229920.peg.1096
Zinc_regulated_enzymes	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.229920.peg.583
Zinc_regulated_enzymes	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.229920.peg.767
Zinc_regulated_enzymes	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229920.peg.2004
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.229920.peg.1052
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.229920.peg.1051
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.229920.peg.1050
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.229920.peg.1049
ar-431-EC_Molybdopterin-guanine_dinucleotide_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.229920.peg.378
ar-431-EC_Molybdopterin-guanine_dinucleotide_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobB	fig|6666666.229920.peg.642
cAMP_signaling_in_bacteria	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.229920.peg.1499
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229920.peg.1467
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229920.peg.212
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229920.peg.83
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229920.peg.1039
cAMP_signaling_in_bacteria	Cyclic AMP receptor protein	fig|6666666.229920.peg.569
cAMP_signaling_in_bacteria	bifunctional hemolysin-adenylate cyclase precursor	fig|6666666.229920.peg.2013
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229920.peg.514
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229920.peg.513
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229920.peg.162
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229920.peg.515
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229920.peg.159
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229920.peg.160
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229920.peg.514
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229920.peg.513
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229920.peg.515
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229920.peg.161
dNTP_triphosphohydrolase_protein_family	Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR	fig|6666666.229920.peg.451
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229920.peg.952
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229920.peg.954
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.229920.peg.953
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229920.peg.951
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229920.peg.525
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA	fig|6666666.229920.peg.1487
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229920.peg.431
mnm5U34_biosynthesis_bacteria	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229920.peg.291
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusA	fig|6666666.229920.peg.706
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229920.peg.1290
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229920.peg.1289
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229920.peg.1288
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229920.peg.1836
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229920.peg.134
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229920.peg.774
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229920.peg.775
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229920.peg.1402
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229920.peg.852
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229920.peg.632
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229920.peg.1542
pyrimidine_conversions	Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)	fig|6666666.229920.peg.668
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.229920.peg.585
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229920.peg.738
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229920.peg.1169
pyrimidine_conversions	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229920.peg.1408
pyrimidine_conversions	Deoxycytidine triphosphate deaminase (EC 3.5.4.13)	fig|6666666.229920.peg.353
pyrimidine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229920.peg.1904
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229920.peg.1232
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229920.peg.602
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.229920.peg.551
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229920.peg.1658
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.229920.peg.116
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229920.peg.413
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229920.peg.1125
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48) [C1]	fig|6666666.229920.peg.352
pyrimidine_conversions	Uridine phosphorylase (EC 2.4.2.3)	fig|6666666.229920.peg.1189
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229920.peg.157
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229920.peg.536
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229920.peg.536
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229920.peg.612
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229920.peg.1854
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.229920.peg.1854
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.402
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.1484
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229920.peg.1654
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229920.peg.573
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229920.peg.177
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229920.peg.457
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229920.peg.30
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229920.peg.1046
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229920.peg.1881
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229920.peg.1384
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.229920.peg.712
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229920.peg.1873
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229920.peg.43
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229920.peg.586
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229920.peg.1131
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229920.peg.1573
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229920.peg.422
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.229920.peg.356
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229920.peg.518
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229920.peg.1508
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229920.peg.1507
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.229920.peg.32
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.229920.peg.649
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229920.peg.737
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229920.peg.1791
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229920.peg.158
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229920.peg.2022
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229920.peg.499
tRNA_modification_Bacteria	Believed to be involved in assembly of Fe-S clusters	fig|6666666.229920.peg.519
tRNA_modification_Bacteria	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229920.peg.1401
tRNA_modification_Bacteria	COG1720: Uncharacterized conserved protein	fig|6666666.229920.peg.653
tRNA_modification_Bacteria	Chaperone protein HscA	fig|6666666.229920.peg.521
tRNA_modification_Bacteria	Chaperone protein HscB	fig|6666666.229920.peg.522
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229920.peg.525
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229920.peg.738
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229920.peg.1659
tRNA_modification_Bacteria	Ferredoxin, 2Fe-2S	fig|6666666.229920.peg.520
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229920.peg.606
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229920.peg.431
tRNA_modification_Bacteria	Iron binding protein IscA for iron-sulfur cluster assembly	fig|6666666.229920.peg.523
tRNA_modification_Bacteria	Iron-sulfur cluster assembly scaffold protein IscU	fig|6666666.229920.peg.524
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229920.peg.1428
tRNA_modification_Bacteria	Predicted P-loop ATPase fused to an acetyltransferase COG1444	fig|6666666.229920.peg.575
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.229920.peg.1502
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.229920.peg.2005
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229920.peg.2004
tRNA_modification_Bacteria	Rhodanese-like domain required for thiamine synthesis	fig|6666666.229920.peg.1807
tRNA_modification_Bacteria	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.932
tRNA_modification_Bacteria	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.1383
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229920.peg.1858
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229920.peg.343
tRNA_modification_Bacteria	hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]	fig|6666666.229920.peg.917
tRNA_modification_Bacteria	tRNA (5-methoxyuridine) 34 synthase	fig|6666666.229920.peg.508
tRNA_modification_Bacteria	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229920.peg.291
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229920.peg.840
tRNA_modification_Bacteria	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229920.peg.1300
tRNA_modification_Bacteria	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	fig|6666666.229920.peg.1879
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusA	fig|6666666.229920.peg.706
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229920.peg.1290
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229920.peg.1289
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229920.peg.1288
tRNA_modification_Bacteria	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229920.peg.1807
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229920.peg.1250
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229920.peg.1093
tRNA_modification_Bacteria	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229920.peg.1456
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.259
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.1685
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229920.peg.1768
tRNA_modification_Bacteria	tRNA pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229920.peg.1884
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229920.peg.1836
tRNA_modification_Bacteria	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229920.peg.1489
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229920.peg.1030
tRNA_modification_Bacteria	tRNA-dihydrouridine synthase C (EC 1.-.-.-)	fig|6666666.229920.peg.136
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229920.peg.1671
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229920.peg.177
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229920.peg.115
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229920.peg.1104
tRNA_processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.229920.peg.773
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229920.peg.434
tRNA_processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.229920.peg.139
tRNA_processing	Ribonuclease T (EC 3.1.13.-)	fig|6666666.229920.peg.174
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229920.peg.1093
tRNA_processing	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229920.peg.1456
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.259
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229920.peg.1685
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229920.peg.1768
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229920.peg.1030
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229920.peg.177
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229920.peg.115
tRNAmodification_position_34	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229920.peg.431
tRNAmodification_position_34	Predicted P-loop ATPase fused to an acetyltransferase COG1444	fig|6666666.229920.peg.575
tRNAmodification_position_34	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229920.peg.1858
tRNAmodification_position_34	tRNA (5-methoxyuridine) 34 synthase	fig|6666666.229920.peg.508
tRNAmodification_position_34	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229920.peg.291
tRNAmodification_position_34	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	fig|6666666.229920.peg.1879
tRNAmodification_position_34	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229920.peg.1836
tRNAmodification_position_34	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229920.peg.1030
tRNAmodification_position_34	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229920.peg.1671
tRNAmodification_position_34	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229920.peg.115
