16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229926.peg.1199
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229926.peg.1200
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.229926.peg.1202
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229926.peg.1596
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229926.peg.1201
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229926.peg.772
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229926.peg.250
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229926.peg.1914
2-phosphoglycolate_salvage	Putative phosphatase YqaB	fig|6666666.229926.peg.1252
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229926.peg.989
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229926.peg.294
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229926.peg.1174
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229926.peg.1339
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.229926.peg.1571
5-FCL-like_protein	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229926.peg.746
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229926.peg.747
5-FCL-like_protein	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.229926.peg.970
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229926.peg.2030
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229926.peg.1126
5-FCL-like_protein	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229926.peg.745
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229926.peg.1317
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229926.peg.1169
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229926.peg.354
ABC_transporter_of_unknown_substrate_X	Possible ABC transporter, periplasmic substrate X binding protein precursor	fig|6666666.229926.peg.723
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, ATP-binding subunit	fig|6666666.229926.peg.720
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, permease subunit I	fig|6666666.229926.peg.721
ABC_transporter_of_unknown_substrate_X	Putative ABC transporter of substrate X, permease subunit II	fig|6666666.229926.peg.722
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229926.peg.336
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229926.peg.1954
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229926.peg.1949
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229926.peg.1950
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229926.peg.1952
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229926.peg.1951
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.229926.peg.207
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229926.peg.1378
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.229926.peg.684
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229926.peg.205
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229926.peg.206
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229926.peg.1377
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	FIG138056: a glutathione-dependent thiol reductase	fig|6666666.229926.peg.1184
A_Glutathione-dependent_Thiol_Reductase_Associated_with_a_Step_in_Lysine_Biosynthesis	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229926.peg.1183
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229926.peg.414
A_Hypothetical_Protein_Related_to_Proline_Metabolism	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229926.peg.1808
A_conserved_operon_linked_to_TyrR_and_possibly_involved_in_virulence	Conserved protein YcjX with nucleoside triphosphate hydrolase domain	fig|6666666.229926.peg.315
A_conserved_operon_linked_to_TyrR_and_possibly_involved_in_virulence	Membrane protein YcjF	fig|6666666.229926.peg.316
Acyl-CoA_thioesterase_II	Acyl-CoA thioesterase II (EC 3.1.2.-)	fig|6666666.229926.peg.567
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229926.peg.978
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229926.peg.1272
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229926.peg.978
Alanine_biosynthesis	Alanine racemase, biosynthetic (EC 5.1.1.1)	fig|6666666.229926.peg.348
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229926.peg.1005
Alanine_biosynthesis	Chaperone protein HscA	fig|6666666.229926.peg.163
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229926.peg.167
Alanine_biosynthesis	Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA	fig|6666666.229926.peg.591
Alanine_biosynthesis	Ferredoxin, 2Fe-2S	fig|6666666.229926.peg.162
Alanine_biosynthesis	HTH-type transcriptional regulator IlvY	fig|6666666.229926.peg.117
Alanine_biosynthesis	Iron binding protein IscA for iron-sulfur cluster assembly	fig|6666666.229926.peg.165
Alanine_biosynthesis	Iron-sulfur cluster assembly scaffold protein IscU	fig|6666666.229926.peg.166
Alanine_biosynthesis	Iron-sulfur cluster regulator IscR	fig|6666666.229926.peg.168
Alkylphosphonate_utilization	Alkylphosphonate utilization operon protein PhnA	fig|6666666.229926.peg.807
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229926.peg.327
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229926.peg.1153
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229926.peg.992
Aminopeptidases_(EC_3.4.11.-)	Membrane alanine aminopeptidase N (EC 3.4.11.2)	fig|6666666.229926.peg.844
Aminopeptidases_(EC_3.4.11.-)	Peptidase B (EC 3.4.11.23)	fig|6666666.229926.peg.155
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229926.peg.290
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229926.peg.1352
Ammonia_assimilation	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.229926.peg.1038
Ammonia_assimilation	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229926.peg.422
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.229926.peg.1562
Ammonia_assimilation	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.229926.peg.1896
Anaerobic_respiratory_reductases	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229926.peg.474
Anaerobic_respiratory_reductases	Fe-S-cluster-containing hydrogenase components 1	fig|6666666.229926.peg.893
Anaerobic_respiratory_reductases	Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)	fig|6666666.229926.peg.525
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229926.peg.794
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229926.peg.1962
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229926.peg.794
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229926.peg.1962
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229926.peg.1008
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.229926.peg.1624
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.229926.peg.1032
Arginine_Biosynthesis_--_gjo	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229926.peg.1183
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229926.peg.482
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229926.peg.1008
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.229926.peg.1624
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.229926.peg.1032
Arginine_Biosynthesis_extended	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229926.peg.1183
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229926.peg.482
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229926.peg.1008
Arginine_Deiminase_Pathway	Arginine/ornithine antiporter ArcD	fig|6666666.229926.peg.484
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229926.peg.483
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229926.peg.482
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, ATP-binding protein ArtP	fig|6666666.229926.peg.1207
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, periplasmic arginine-binding protein ArtI	fig|6666666.229926.peg.1206
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, permease protein ArtM	fig|6666666.229926.peg.1204
Arginine_and_Ornithine_Degradation	Arginine ABC transporter, permease protein ArtQ	fig|6666666.229926.peg.1205
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229926.peg.1008
Arginine_and_Ornithine_Degradation	Arginine/ornithine antiporter ArcD	fig|6666666.229926.peg.484
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229926.peg.483
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229926.peg.1623
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229926.peg.482
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229926.peg.1801
Arsenic_resistance	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229926.peg.474
Arsenic_resistance	Arsenic efflux pump protein	fig|6666666.229926.peg.997
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component	fig|6666666.229926.peg.919
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC	fig|6666666.229926.peg.918
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD	fig|6666666.229926.peg.917
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	fig|6666666.229926.peg.724
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB	fig|6666666.229926.peg.916
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-)	fig|6666666.229926.peg.915
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-)	fig|6666666.229926.peg.921
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	Autoinducer 2 (AI-2) modifying protein LsrG	fig|6666666.229926.peg.914
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	LsrR, transcriptional repressor of lsr operon	fig|6666666.229926.peg.920
Autoinducer_2_(AI-2)_transport_and_processing_(lsrACDBFGE_operon)	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229926.peg.1255
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229926.peg.886
Auxin_biosynthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229926.peg.887
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229926.peg.890
Auxin_biosynthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229926.peg.891
Auxin_biosynthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229926.peg.909
Auxin_biosynthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229926.peg.908
Bacterial_Cell_Division	Cell division protein BolA	fig|6666666.229926.peg.2062
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229926.peg.252
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229926.peg.1189
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229926.peg.968
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229926.peg.1199
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229926.peg.1387
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229926.peg.1200
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229926.peg.1190
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229926.peg.1194
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229926.peg.248
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229926.peg.1887
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229926.peg.1888
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229926.peg.1188
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.229926.peg.1202
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.229926.peg.249
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229926.peg.1811
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229926.peg.310
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229926.peg.187
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229926.peg.1775
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229926.peg.283
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229926.peg.284
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229926.peg.285
Bacterial_Cell_Division	Septum site-determining protein MinC	fig|6666666.229926.peg.210
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229926.peg.420
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229926.peg.1971
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229926.peg.1201
Bacterial_Chemotaxis	Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)	fig|6666666.229926.peg.2151
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229926.peg.1153
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229926.peg.252
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229926.peg.1189
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229926.peg.1199
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229926.peg.1387
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229926.peg.1200
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229926.peg.1190
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229926.peg.1194
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229926.peg.1188
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.229926.peg.1202
Bacterial_Cytoskeleton	Cell division protein ZipA	fig|6666666.229926.peg.1099
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229926.peg.310
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229926.peg.1997
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229926.peg.283
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229926.peg.284
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229926.peg.285
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229926.peg.1597
Bacterial_Cytoskeleton	Septum site-determining protein MinC	fig|6666666.229926.peg.210
Bacterial_Cytoskeleton	Z-ring-associated protein ZapA	fig|6666666.229926.peg.293
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229926.peg.1387
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229926.peg.1292
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ferric uptake regulation protein FUR	fig|6666666.229926.peg.648
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229926.peg.2014
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229926.peg.1678
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229926.peg.1312
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229926.peg.463
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229926.peg.575
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229926.peg.1095
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229926.peg.420
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229926.peg.1971
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229926.peg.46
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229926.peg.81
Biofilm_Adhesin_Biosynthesis	Biofilm PGA outer membrane secretin PgaA	fig|6666666.229926.peg.1271
Biofilm_Adhesin_Biosynthesis	Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-)	fig|6666666.229926.peg.1269
Biofilm_Adhesin_Biosynthesis	Biofilm PGA synthesis deacetylase PgaB (EC 3.-)	fig|6666666.229926.peg.1270
Biogenesis_of_c-type_cytochromes	ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA	fig|6666666.229926.peg.1742
Biogenesis_of_c-type_cytochromes	ABC transporter involved in cytochrome c biogenesis, CcmB subunit	fig|6666666.229926.peg.1743
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmF	fig|6666666.229926.peg.1747
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmH	fig|6666666.229926.peg.1750
Biogenesis_of_c-type_cytochromes	Cytochrome c heme lyase subunit CcmL	fig|6666666.229926.peg.1749
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE	fig|6666666.229926.peg.1744
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE	fig|6666666.229926.peg.1745
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmE, heme chaperone	fig|6666666.229926.peg.1746
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase	fig|6666666.229926.peg.1748
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.229926.peg.1945
Biogenesis_of_c-type_cytochromes	Periplasmic thiol:disulfide interchange protein DsbA	fig|6666666.229926.peg.1546
Biogenesis_of_c-type_cytochromes	Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation	fig|6666666.229926.peg.1729
Biogenesis_of_cytochrome_c_oxidases	Copper metallochaperone, bacterial analog of Cox17 protein	fig|6666666.229926.peg.56
Biogenesis_of_cytochrome_c_oxidases	Ferredoxin--NADP(+) reductase (EC 1.18.1.2)	fig|6666666.229926.peg.780
Biogenesis_of_cytochrome_c_oxidases	Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly	fig|6666666.229926.peg.1429
Biotin_biosynthesis_Experimental	Biotin synthase (EC 2.8.1.6)	fig|6666666.229926.peg.1049
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.229926.peg.1582
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229926.peg.1118
Biotin_biosynthesis_Experimental	Dethiobiotin synthetase (EC 6.3.3.3)	fig|6666666.229926.peg.922
Biotin_biosynthesis_Experimental	NfuA Fe-S protein maturation	fig|6666666.229926.peg.1117
Biphenyl_Degradation	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229926.peg.1339
Broadly_distributed_proteins_not_in_subsystems	FIG001943: hypothetical protein YajQ	fig|6666666.229926.peg.1922
Broadly_distributed_proteins_not_in_subsystems	FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster	fig|6666666.229926.peg.727
Broadly_distributed_proteins_not_in_subsystems	UPF0225 protein YchJ	fig|6666666.229926.peg.2097
Broadly_distributed_proteins_not_in_subsystems	UPF0265 protein YeeX	fig|6666666.229926.peg.1373
Broadly_distributed_proteins_not_in_subsystems	YciL protein	fig|6666666.229926.peg.2167
Broadly_distributed_proteins_not_in_subsystems	YpfJ protein, zinc metalloprotease superfamily	fig|6666666.229926.peg.1735
Broadly_distributed_proteins_not_in_subsystems	YrbA protein	fig|6666666.229926.peg.430
CBSS-12149.1.peg.3301	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229926.peg.429
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, ATP-binding protein YrbF	fig|6666666.229926.peg.435
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, auxiliary component YrbC	fig|6666666.229926.peg.432
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, periplasmic component YrbD	fig|6666666.229926.peg.433
CBSS-12149.1.peg.3301	Uncharacterized ABC transporter, permease component YrbE	fig|6666666.229926.peg.434
CBSS-12149.1.peg.3301	Uncharacterized protein YrbB	fig|6666666.229926.peg.431
CBSS-12149.1.peg.3301	YrbA protein	fig|6666666.229926.peg.430
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229926.peg.705
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229926.peg.704
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229926.peg.706
CBSS-160492.1.peg.550	21 kDa hemolysin precursor	fig|6666666.229926.peg.768
CBSS-160492.1.peg.550	LppC putative lipoprotein	fig|6666666.229926.peg.771
CBSS-160492.1.peg.550	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229926.peg.769
CBSS-160492.1.peg.550	Predicted endonuclease distantly related to archaeal Holliday junction resolvase	fig|6666666.229926.peg.770
CBSS-160492.1.peg.550	rRNA small subunit methyltransferase I	fig|6666666.229926.peg.772
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229926.peg.1957
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229926.peg.1961
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229926.peg.1960
CBSS-176299.4.peg.1292	DNA recombination and repair protein RecO	fig|6666666.229926.peg.2042
CBSS-176299.4.peg.1292	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.229926.peg.456
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.229926.peg.2040
CBSS-176299.4.peg.1292	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.229926.peg.457
CBSS-176299.4.peg.1292	GTP-binding protein Era	fig|6666666.229926.peg.1775
CBSS-176299.4.peg.1292	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.229926.peg.457
CBSS-176299.4.peg.1292	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229926.peg.1776
CBSS-176299.4.peg.1292	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229926.peg.1777
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.229926.peg.1897
CBSS-196164.1.peg.461	Hypothetical, related to broad specificity phosphatases COG0406	fig|6666666.229926.peg.802
CBSS-203122.12.peg.188	ComM-related protein	fig|6666666.229926.peg.1990
CBSS-203122.12.peg.188	FIGfam050825	fig|6666666.229926.peg.1991
CBSS-203122.12.peg.188	FIGfam110555	fig|6666666.229926.peg.1995
CBSS-203122.12.peg.188	MG(2+) CHELATASE FAMILY PROTEIN	fig|6666666.229926.peg.1990
CBSS-203122.12.peg.188	MG(2+) CHELATASE FAMILY PROTEIN	fig|6666666.229926.peg.2005
CBSS-203122.12.peg.188	Mll9366 protein	fig|6666666.229926.peg.1994
CBSS-203122.12.peg.188	TniA putative transposase	fig|6666666.229926.peg.1992
CBSS-203122.12.peg.188	TniB NTP-binding protein	fig|6666666.229926.peg.1993
CBSS-208964.1.peg.3826	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229926.peg.992
CBSS-208964.1.peg.3826	DNA polymerase III chi subunit (EC 2.7.7.7)	fig|6666666.229926.peg.1861
CBSS-208964.1.peg.3826	FIG000906: Predicted Permease	fig|6666666.229926.peg.990
CBSS-208964.1.peg.3826	FIG000988: Predicted permease	fig|6666666.229926.peg.991
CBSS-208964.1.peg.3826	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229926.peg.1866
CBSS-208964.1.peg.3988	DNA polymerase III delta subunit (EC 2.7.7.7)	fig|6666666.229926.peg.67
CBSS-208964.1.peg.3988	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229926.peg.66
CBSS-208964.1.peg.3988	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229926.peg.64
CBSS-211586.1.peg.1979	FIG001881: hydrolase of alkaline phosphatase superfamily	fig|6666666.229926.peg.2089
CBSS-211586.1.peg.1979	FIG002927: hypothetical protein	fig|6666666.229926.peg.2090
CBSS-211586.1.peg.1979	Nucleoid-associated protein NdpA	fig|6666666.229926.peg.2091
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229926.peg.1344
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229926.peg.1343
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229926.peg.1342
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229926.peg.1365
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229926.peg.1368
CBSS-211586.9.peg.2729	Acyl-CoA thioesterase YciA, involved in membrane biogenesis	fig|6666666.229926.peg.2166
CBSS-211586.9.peg.2729	Intracellular septation protein IspA	fig|6666666.229926.peg.2165
CBSS-211586.9.peg.2729	YciL protein	fig|6666666.229926.peg.2167
CBSS-216591.1.peg.168	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229926.peg.1181
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.846
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.1726
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.2017
CBSS-216591.1.peg.168	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.2027
CBSS-216591.1.peg.168	Aspartokinase (EC 2.7.2.4)	fig|6666666.229926.peg.411
CBSS-216591.1.peg.168	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229926.peg.1118
CBSS-216591.1.peg.168	Histone acetyltransferase HPA2 and related acetyltransferases	fig|6666666.229926.peg.1648
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229926.peg.205
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229926.peg.206
CBSS-221988.1.peg.1679	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229926.peg.1654
CBSS-221988.1.peg.1679	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229926.peg.1656
CBSS-221988.1.peg.1679	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229926.peg.1657
CBSS-221988.1.peg.1679	FIG003021: Membrane protein	fig|6666666.229926.peg.1660
CBSS-221988.1.peg.1679	Pantothenate:Na+ symporter (TC 2.A.21.1.1)	fig|6666666.229926.peg.1661
CBSS-224911.1.peg.435	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229926.peg.1640
CBSS-224911.1.peg.435	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229926.peg.1988
CBSS-224911.1.peg.435	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229926.peg.1989
CBSS-228400.4.peg.1623	FIG001587: exported protein	fig|6666666.229926.peg.1404
CBSS-228400.4.peg.1623	Hypothetical metal-binding enzyme, YcbL homolog	fig|6666666.229926.peg.1406
CBSS-228400.4.peg.1623	L,D-transpeptidase YcbB	fig|6666666.229926.peg.1403
CBSS-228410.1.peg.134	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.229926.peg.1347
CBSS-228410.1.peg.134	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229926.peg.682
CBSS-228410.1.peg.134	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229926.peg.683
CBSS-228410.1.peg.134	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229926.peg.1346
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229926.peg.2134
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229926.peg.2135
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229926.peg.2140
CBSS-243265.1.peg.198	Transcription elongation factor GreB	fig|6666666.229926.peg.2133
CBSS-243277.1.peg.4359	Protein YcgL	fig|6666666.229926.peg.209
CBSS-243277.1.peg.4359	YcgN (Fragment)	fig|6666666.229926.peg.815
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229926.peg.1588
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229926.peg.737
CBSS-257314.1.peg.752	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.229926.peg.1900
CBSS-262728.1.peg.1737	Aspartate--ammonia ligase (EC 6.3.1.1)	fig|6666666.229926.peg.479
CBSS-262728.1.peg.1737	Regulatory protein AsnC	fig|6666666.229926.peg.478
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229926.peg.1970
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229926.peg.262
CBSS-269482.1.peg.1294	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229926.peg.410
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229926.peg.1970
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229926.peg.262
CBSS-269801.1.peg.2186	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	fig|6666666.229926.peg.947
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229926.peg.840
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229926.peg.275
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229926.peg.276
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229926.peg.180
CBSS-290633.1.peg.1906	Mlr7403 protein	fig|6666666.229926.peg.1710
CBSS-291331.3.peg.3674	FIG026291: Hypothetical periplasmic protein	fig|6666666.229926.peg.1859
CBSS-292415.3.peg.2341	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229926.peg.683
CBSS-296591.1.peg.2330	Nucleoside-diphosphate-sugar epimerases	fig|6666666.229926.peg.1033
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229926.peg.690
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229926.peg.547
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229926.peg.558
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229926.peg.1895
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229926.peg.2044
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229926.peg.2043
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229926.peg.132
CBSS-312309.3.peg.1965	[Protein-PII] uridylyltransferase (EC 2.7.7.59)	fig|6666666.229926.peg.1896
CBSS-315749.4.peg.3658	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229926.peg.474
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229926.peg.1940
CBSS-316057.3.peg.1308	DNA-directed RNA polymerase specialized sigma subunit, sigma24-like	fig|6666666.229926.peg.2131
CBSS-316057.3.peg.3521	Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)	fig|6666666.229926.peg.1038
CBSS-316057.3.peg.3521	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229926.peg.419
CBSS-316273.3.peg.2709	Superfamily II DNA/RNA helicases, SNF2 family	fig|6666666.229926.peg.620
CBSS-316275.9.peg.382	FIG001826: putative inner membrane protein	fig|6666666.229926.peg.1572
CBSS-316275.9.peg.382	FIG023911: putative membrane protein	fig|6666666.229926.peg.1573
CBSS-316407.3.peg.1371	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229926.peg.148
CBSS-316407.3.peg.1371	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229926.peg.191
CBSS-316407.3.peg.1371	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229926.peg.137
CBSS-316407.3.peg.1371	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229926.peg.150
CBSS-316407.3.peg.1371	Putative lipase in cluster with Phosphatidate cytidylyltransferase	fig|6666666.229926.peg.1577
CBSS-316407.3.peg.1371	Putative lipase in cluster with Phosphatidate cytidylyltransferase	fig|6666666.229926.peg.1578
CBSS-316407.3.peg.1371	Ser/Thr and Tyr protein phosphatase (dual specificity)	fig|6666666.229926.peg.1579
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229926.peg.978
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229926.peg.978
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.229926.peg.1563
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.229926.peg.455
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.229926.peg.2047
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229926.peg.1427
CBSS-323850.3.peg.3269	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229926.peg.1127
CBSS-323850.3.peg.3269	Tyrosine recombinase XerC	fig|6666666.229926.peg.1128
CBSS-326442.4.peg.1852	ABC-type polar amino acid transport system, ATPase component	fig|6666666.229926.peg.1458
CBSS-326442.4.peg.1852	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229926.peg.2088
CBSS-326442.4.peg.1852	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.229926.peg.1425
CBSS-326442.4.peg.1852	Putative TEGT family carrier/transport protein	fig|6666666.229926.peg.617
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229926.peg.1392
CBSS-326442.4.peg.1852	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229926.peg.616
CBSS-326442.4.peg.1852	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229926.peg.1460
CBSS-326442.4.peg.1852	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229926.peg.1461
CBSS-326442.4.peg.1852	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229926.peg.873
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229926.peg.1161
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229926.peg.1649
CBSS-339671.5.peg.589	Cell division protein BolA	fig|6666666.229926.peg.2062
CBSS-339671.5.peg.589	Hypothetical lipoprotein YajG precursor	fig|6666666.229926.peg.2061
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.229926.peg.1347
CBSS-342610.3.peg.1536	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229926.peg.682
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229926.peg.683
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229926.peg.1346
CBSS-342610.3.peg.1794	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.229926.peg.1180
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229926.peg.1181
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229926.peg.669
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229926.peg.1092
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229926.peg.1632
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229926.peg.1091
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229926.peg.187
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229926.peg.284
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229926.peg.285
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229926.peg.1841
CBSS-354.1.peg.876	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229926.peg.54
CBSS-354.1.peg.876	FIG002903: a protein of unknown function perhaps involved in purine metabolism	fig|6666666.229926.peg.55
CBSS-354.1.peg.876	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229926.peg.2157
CBSS-364106.7.peg.3204	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229926.peg.1640
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.229926.peg.389
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229926.peg.1062
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229926.peg.533
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229926.peg.1098
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229926.peg.425
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229926.peg.511
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229926.peg.1564
CBSS-498211.3.peg.1415	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229926.peg.1712
CBSS-498211.3.peg.1415	FIG021952: putative membrane protein	fig|6666666.229926.peg.1713
CBSS-498211.3.peg.1415	GTP-binding protein EngA	fig|6666666.229926.peg.180
CBSS-498211.3.peg.1415	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229926.peg.1711
CBSS-498211.3.peg.1415	Mlr7403 protein	fig|6666666.229926.peg.1710
CBSS-498211.3.peg.1415	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229926.peg.156
CBSS-498211.3.peg.1415	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229926.peg.1715
CBSS-498211.3.peg.1415	Type IV pilus biogenesis protein PilF	fig|6666666.229926.peg.1714
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.44
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.231
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.1569
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229926.peg.1213
CBSS-584.1.peg.1352	FIG009095: D,D-carboxypeptidase family protein	fig|6666666.229926.peg.1182
CBSS-584.1.peg.1352	FIG138056: a glutathione-dependent thiol reductase	fig|6666666.229926.peg.1184
CBSS-584.1.peg.1352	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229926.peg.1183
CBSS-584.1.peg.3382	33 kDa chaperonin (Heat shock protein 33) (HSP33)	fig|6666666.229926.peg.15
CBSS-584.1.peg.3382	FIG001957: putative hydrolase	fig|6666666.229926.peg.13
CBSS-584.1.peg.3382	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229926.peg.2119
CBSS-584.1.peg.3382	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229926.peg.14
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229926.peg.414
CBSS-630.2.peg.3360	Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock)	fig|6666666.229926.peg.302
CBSS-630.2.peg.3360	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229926.peg.1808
CBSS-630.2.peg.3360	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229926.peg.1069
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229926.peg.135
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229926.peg.1712
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229926.peg.1199
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229926.peg.1596
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229926.peg.136
CBSS-83333.1.peg.2911	FIG002060: uncharacterized protein YggL	fig|6666666.229926.peg.2055
CBSS-83333.1.peg.2911	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229926.peg.2056
CBSS-83333.1.peg.876	Cell division protein FtsK	fig|6666666.229926.peg.1387
CBSS-83333.1.peg.876	FIG065221: Holliday junction DNA helicase	fig|6666666.229926.peg.1389
CBSS-83333.1.peg.876	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229926.peg.1388
CBSS-83333.1.peg.946	Cell division inhibitor	fig|6666666.229926.peg.1009
CBSS-83333.1.peg.946	DNA transformation protein TfoX	fig|6666666.229926.peg.1227
CBSS-83333.1.peg.946	Inner membrane protein YccF	fig|6666666.229926.peg.608
CBSS-83333.1.peg.946	Methylglyoxal synthase (EC 4.2.3.3)	fig|6666666.229926.peg.609
CBSS-83333.1.peg.946	Putative efflux (PET) family inner membrane protein YccS	fig|6666666.229926.peg.607
CBSS-83333.1.peg.946	UPF0319 protein YccT precursor	fig|6666666.229926.peg.610
CBSS-87626.3.peg.3639	FIG001590: Putative conserved exported protein precursor	fig|6666666.229926.peg.291
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229926.peg.290
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229926.peg.461
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229926.peg.2014
CO2_uptake,_carboxysome	RuBisCO operon transcriptional regulator	fig|6666666.229926.peg.2139
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.229926.peg.618
CRISPRs	CRISPR-associated protein Cas3''	fig|6666666.229926.peg.1039
CRISPRs	CRISPR-associated protein, Cas5d family	fig|6666666.229926.peg.627
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229926.peg.628
CRISPRs	CRISPR-associated protein, Csd1 family	fig|6666666.229926.peg.1043
CRISPRs	CRISPR-associated protein, Csd2 family	fig|6666666.229926.peg.629
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229926.peg.1916
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229926.peg.1772
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229926.peg.1477
Calvin-Benson_cycle	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229926.peg.1929
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.229926.peg.1521
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229926.peg.454
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229926.peg.1522
Calvin-Benson_cycle	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229926.peg.1070
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229926.peg.251
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.229926.peg.243
Calvin-Benson_cycle	Transketolase, C-terminal section (EC 2.2.1.1)	fig|6666666.229926.peg.604
Calvin-Benson_cycle	Transketolase, N-terminal section (EC 2.2.1.1)	fig|6666666.229926.peg.603
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229926.peg.1649
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229926.peg.174
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229926.peg.175
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229926.peg.373
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229926.peg.2054
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229926.peg.173
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229926.peg.374
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229926.peg.965
Campylobacter_Iron_Metabolism	Ferric iron ABC transporter, permease protein	fig|6666666.229926.peg.2053
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229926.peg.43
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229926.peg.41
Campylobacter_Iron_Metabolism	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229926.peg.1891
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.229926.peg.303
Campylobacter_Iron_Metabolism	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229926.peg.1890
Capsular_heptose_biosynthesis	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229926.peg.769
Capsular_heptose_biosynthesis	Phosphoheptose isomerase 1 (EC 5.3.1.-)	fig|6666666.229926.peg.1208
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229926.peg.550
Carbon_Starvation	Carbon starvation protein A	fig|6666666.229926.peg.1203
Carbon_Starvation	Carbon storage regulator	fig|6666666.229926.peg.2084
Carbon_Starvation	Starvation lipoprotein Slp paralog	fig|6666666.229926.peg.576
Carbon_Starvation	Stringent starvation protein A	fig|6666666.229926.peg.927
Carbon_Starvation	Stringent starvation protein B	fig|6666666.229926.peg.926
Carbon_storage_regulator	Carbon storage regulator	fig|6666666.229926.peg.2084
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.229926.peg.803
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229926.peg.794
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229926.peg.1962
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229926.peg.1708
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229926.peg.1768
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229926.peg.310
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229926.peg.1997
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229926.peg.647
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229926.peg.1431
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229926.peg.1767
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229926.peg.1766
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229926.peg.1774
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229926.peg.1772
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229926.peg.1769
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229926.peg.1771
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229926.peg.1770
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229926.peg.1483
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229926.peg.1480
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229926.peg.252
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229926.peg.968
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229926.peg.1681
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229926.peg.1105
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229926.peg.14
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229926.peg.640
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229926.peg.2134
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229926.peg.2135
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229926.peg.2140
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229926.peg.1209
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229926.peg.693
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229926.peg.157
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229926.peg.1059
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.229926.peg.1060
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family	fig|6666666.229926.peg.685
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229926.peg.681
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229926.peg.1051
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229926.peg.681
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229926.peg.1051
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229926.peg.681
Chitin_and_N-acetylglucosamine_utilization	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229926.peg.1051
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)	fig|6666666.229926.peg.415
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.229926.peg.416
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229926.peg.337
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229926.peg.886
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229926.peg.887
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.229926.peg.884
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.229926.peg.883
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229926.peg.890
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229926.peg.891
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229926.peg.339
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229926.peg.338
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229926.peg.890
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229926.peg.891
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.229926.peg.1113
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.229926.peg.1114
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229926.peg.909
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229926.peg.908
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229926.peg.345
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229926.peg.1654
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229926.peg.80
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229926.peg.1369
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229926.peg.750
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229926.peg.1186
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229926.peg.654
Chorismate_Synthesis	Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229926.peg.750
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.229926.peg.1186
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229926.peg.119
Chorismate_Synthesis	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.229926.peg.987
Chorismate_Synthesis	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.229926.peg.988
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229926.peg.81
Cinnamic_Acid_Degradation	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229926.peg.1339
Cinnamic_Acid_Degradation	Probable 3-phenylpropionic acid transporter	fig|6666666.229926.peg.1809
Citrate_Metabolism,_Transport,_and_Regulation	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25)	fig|6666666.229926.peg.225
Citrate_Metabolism,_Transport,_and_Regulation	C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)	fig|6666666.229926.peg.701
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase alpha chain (EC 4.1.3.6)	fig|6666666.229926.peg.226
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.229926.peg.227
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	fig|6666666.229926.peg.228
Citrate_Metabolism,_Transport,_and_Regulation	[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	fig|6666666.229926.peg.229
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.229926.peg.17
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.229926.peg.19
Cluster_Ytf_and_putative_sugar_transporter	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229926.peg.1929
Cluster_Ytf_and_putative_sugar_transporter	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229926.peg.766
Cluster_Ytf_and_putative_sugar_transporter	Uncharacterized protein YtfM precursor	fig|6666666.229926.peg.2122
Cluster_Ytf_and_putative_sugar_transporter	Uncharacterized protein YtfN	fig|6666666.229926.peg.2121
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229926.peg.2085
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229926.peg.1563
Cluster_containing_Alanyl-tRNA_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.229926.peg.2078
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229926.peg.119
Cluster_containing_Glutathione_synthetase	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229926.peg.860
Cluster_containing_Glutathione_synthetase	Putative Holliday junction resolvase YggF	fig|6666666.229926.peg.2078
Cluster_containing_Glutathione_synthetase	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229926.peg.2080
Cluster_containing_Glutathione_synthetase	UPF0301 protein YqgE	fig|6666666.229926.peg.2079
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229926.peg.1784
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.229926.peg.389
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229926.peg.108
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229926.peg.109
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229926.peg.51
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229926.peg.1671
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.229926.peg.116
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.229926.peg.1432
Coenzyme_A_Biosynthesis	Pantothenate:Na+ symporter (TC 2.A.21.1.1)	fig|6666666.229926.peg.1661
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229926.peg.262
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.229926.peg.94
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.229926.peg.94
Coenzyme_B12_biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229926.peg.2127
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229926.peg.859
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229926.peg.865
Coenzyme_B12_biosynthesis	Vitamin B12 ABC transporter, permease component BtuC	fig|6666666.229926.peg.866
Coenzyme_F420_hydrogenase	Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.229926.peg.1417
Coenzyme_F420_hydrogenase	Hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.229926.peg.896
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.846
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.1726
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.2017
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.2027
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspA	fig|6666666.229926.peg.1634
Cold_shock,_CspA_family_of_proteins	Cold shock protein CspD	fig|6666666.229926.peg.954
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229926.peg.345
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229926.peg.1654
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229926.peg.80
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229926.peg.1369
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229926.peg.654
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229926.peg.119
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.229926.peg.987
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25)	fig|6666666.229926.peg.988
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229926.peg.81
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Transcriptional repressor protein TrpR	fig|6666666.229926.peg.1157
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Transcriptional repressor protein TyrR	fig|6666666.229926.peg.317
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229926.peg.1292
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229926.peg.840
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229926.peg.106
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229926.peg.461
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229926.peg.2014
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229926.peg.146
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229926.peg.1715
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229926.peg.1312
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229926.peg.251
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229926.peg.275
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229926.peg.276
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Similar to C-terminal Zn-finger domain of DNA topoisomerase I	fig|6666666.229926.peg.121
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229926.peg.463
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229926.peg.575
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229926.peg.1095
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229926.peg.1603
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229926.peg.1474
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229926.peg.1016
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229926.peg.1694
Copper_homeostasis	Copper chaperone	fig|6666666.229926.peg.1693
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229926.peg.1694
Copper_homeostasis	Cu(I)-responsive transcriptional regulator	fig|6666666.229926.peg.1692
Copper_homeostasis	Cytochrome c heme lyase subunit CcmF	fig|6666666.229926.peg.1747
Copper_homeostasis	Cytochrome c heme lyase subunit CcmH	fig|6666666.229926.peg.1750
Copper_homeostasis:_copper_tolerance	Copper homeostasis protein CutE	fig|6666666.229926.peg.152
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.44
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.231
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.1569
Creatine_and_Creatinine_Degradation	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229926.peg.2088
Cyanate_hydrolysis	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.229926.peg.767
Cysteine_Biosynthesis	Cys regulon transcriptional activator CysB	fig|6666666.229926.peg.753
Cysteine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.229926.peg.1101
Cysteine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229926.peg.1474
Cysteine_Biosynthesis	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.229926.peg.375
Cysteine_Biosynthesis	Sulfate transporter, CysZ-type	fig|6666666.229926.peg.1100
CytR_regulation	Cyclic AMP receptor protein	fig|6666666.229926.peg.90
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229926.peg.1078
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229926.peg.1075
D-Galacturonate_and_D-Glucuronate_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.229926.peg.1081
D-Galacturonate_and_D-Glucuronate_Utilization	D-mannonate oxidoreductase (EC 1.1.1.57)	fig|6666666.229926.peg.1077
D-Galacturonate_and_D-Glucuronate_Utilization	Hexuronate utilization operon transcriptional repressor ExuR	fig|6666666.229926.peg.1082
D-Galacturonate_and_D-Glucuronate_Utilization	Mannonate dehydratase (EC 4.2.1.8)	fig|6666666.229926.peg.1083
D-Galacturonate_and_D-Glucuronate_Utilization	Mannonate dehydratase (EC 4.2.1.8)	fig|6666666.229926.peg.1084
D-Galacturonate_and_D-Glucuronate_Utilization	Uronate isomerase (EC 5.3.1.12)	fig|6666666.229926.peg.1076
D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization	Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	fig|6666666.229926.peg.52
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229926.peg.1785
D-Tagatose_and_Galactitol_Utilization	Galactitol utilization operon repressor	fig|6666666.229926.peg.792
D-Tagatose_and_Galactitol_Utilization	Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251)	fig|6666666.229926.peg.791
D-Tagatose_and_Galactitol_Utilization	PTS system, galactitol-specific IIA component (EC 2.7.1.69)	fig|6666666.229926.peg.787
D-Tagatose_and_Galactitol_Utilization	PTS system, galactitol-specific IIB component (EC 2.7.1.69)	fig|6666666.229926.peg.788
D-Tagatose_and_Galactitol_Utilization	PTS system, galactitol-specific IIC component (EC 2.7.1.69)	fig|6666666.229926.peg.789
D-Tagatose_and_Galactitol_Utilization	PTS system, galactitol-specific IIC component (EC 2.7.1.69)	fig|6666666.229926.peg.790
D-Tagatose_and_Galactitol_Utilization	Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144)	fig|6666666.229926.peg.786
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229926.peg.327
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229926.peg.327
D-gluconate_and_ketogluconates_metabolism	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229926.peg.1078
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.229926.peg.1
D-gluconate_and_ketogluconates_metabolism	Gluconate utilization system Gnt-I transcriptional repressor	fig|6666666.229926.peg.529
D-gluconate_and_ketogluconates_metabolism	Gluconokinase (EC 2.7.1.12)	fig|6666666.229926.peg.531
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.229926.peg.532
D-gluconate_and_ketogluconates_metabolism	Low-affinity gluconate/H+ symporter GntU	fig|6666666.229926.peg.1556
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.229926.peg.1635
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.229926.peg.2003
D-ribose_utilization	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229926.peg.1070
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229926.peg.2143
D-ribose_utilization	Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)	fig|6666666.229926.peg.1637
D-ribose_utilization	Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)	fig|6666666.229926.peg.1638
D-ribose_utilization	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)	fig|6666666.229926.peg.2144
D-ribose_utilization	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)	fig|6666666.229926.peg.2142
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229926.peg.1098
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229926.peg.1247
DNA_Repair_Base_Excision	DNA-3-methyladenine glycosylase (EC 3.2.2.20)	fig|6666666.229926.peg.1425
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229926.peg.1016
DNA_Repair_Base_Excision	Exodeoxyribonuclease I (EC 3.1.11.1)	fig|6666666.229926.peg.833
DNA_Repair_Base_Excision	Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)	fig|6666666.229926.peg.98
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229926.peg.976
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.229926.peg.1781
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229926.peg.647
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229926.peg.1431
DNA_ligases	DNA ligase (ATP) (EC 6.5.1.1)	fig|6666666.229926.peg.534
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229926.peg.659
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229926.peg.1162
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.229926.peg.1164
DNA_processing_cluster	Protein involved in catabolism of external DNA	fig|6666666.229926.peg.88
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229926.peg.1163
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229926.peg.74
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229926.peg.674
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229926.peg.725
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.229926.peg.2057
DNA_repair,_bacterial	DNA mismatch repair endonuclease MutH	fig|6666666.229926.peg.424
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229926.peg.215
DNA_repair,_bacterial	DNA recombination protein RmuC	fig|6666666.229926.peg.123
DNA_repair,_bacterial	DNA recombination-dependent growth factor C	fig|6666666.229926.peg.1806
DNA_repair,_bacterial	DNA recombination-dependent growth factor C	fig|6666666.229926.peg.1807
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229926.peg.1385
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229926.peg.95
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229926.peg.2162
DNA_repair,_bacterial	DNA-cytosine methyltransferase (EC 2.1.1.37)	fig|6666666.229926.peg.1867
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229926.peg.699
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.229926.peg.556
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229926.peg.448
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229926.peg.795
DNA_repair,_bacterial	Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	fig|6666666.229926.peg.79
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229926.peg.425
DNA_repair,_bacterial	RecA protein	fig|6666666.229926.peg.240
DNA_repair,_bacterial	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.229926.peg.269
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229926.peg.75
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229926.peg.392
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229926.peg.1300
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229926.peg.574
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229926.peg.321
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229926.peg.1551
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)	fig|6666666.229926.peg.947
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V beta chain (EC 3.1.11.5)	fig|6666666.229926.peg.948
DNA_repair,_bacterial_RecBCD_pathway	Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)	fig|6666666.229926.peg.1311
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229926.peg.1430
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229926.peg.1766
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229926.peg.2042
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.229926.peg.240
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229926.peg.1163
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229926.peg.75
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229926.peg.392
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229926.peg.1300
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229926.peg.976
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.229926.peg.240
DNA_repair,_bacterial_UmuCD_system	SOS-response repressor and protease LexA (EC 3.4.21.88)	fig|6666666.229926.peg.269
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase Rep	fig|6666666.229926.peg.1250
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229926.peg.533
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229926.peg.1551
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.229926.peg.240
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	Regulatory protein RecX	fig|6666666.229926.peg.241
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229926.peg.146
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229926.peg.1708
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229926.peg.1768
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229926.peg.647
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229926.peg.1431
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229926.peg.1767
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229926.peg.1766
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229926.peg.14
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.229926.peg.72
DNA_structural_proteins,_bacterial	Chromosome partition protein MukB	fig|6666666.229926.peg.831
DNA_structural_proteins,_bacterial	Chromosome partition protein MukE	fig|6666666.229926.peg.830
DNA_structural_proteins,_bacterial	Chromosome partition protein MukF	fig|6666666.229926.peg.828
DNA_structural_proteins,_bacterial	DNA-binding protein Fis	fig|6666666.229926.peg.1665
DNA_structural_proteins,_bacterial	DNA-binding protein HU-alpha	fig|6666666.229926.peg.2114
DNA_structural_proteins,_bacterial	Integration host factor alpha subunit	fig|6666666.229926.peg.875
DNA_structural_proteins,_bacterial	Integration host factor beta subunit	fig|6666666.229926.peg.641
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229926.peg.840
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229926.peg.1162
DNA_topoisomerases,_Type_I,_ATP-independent	Similar to C-terminal Zn-finger domain of DNA topoisomerase I	fig|6666666.229926.peg.121
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229926.peg.647
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229926.peg.1431
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229926.peg.667
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229926.peg.669
DNA_uptake_cluster	Competence protein A	fig|6666666.229926.peg.86
DNA_uptake_cluster	Competence protein B	fig|6666666.229926.peg.85
DNA_uptake_cluster	Competence protein C	fig|6666666.229926.peg.84
DNA_uptake_cluster	Competence protein D	fig|6666666.229926.peg.83
DNA_uptake_cluster	Competence protein E	fig|6666666.229926.peg.82
DNA_uptake_cluster	DNA-binding protein HU-alpha	fig|6666666.229926.peg.2114
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229926.peg.87
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229926.peg.1845
DNA_uptake_cluster	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229926.peg.1892
DNA_uptake_cluster	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.229926.peg.2117
DNA_uptake_cluster	NfuA Fe-S protein maturation	fig|6666666.229926.peg.1117
DNA_uptake_cluster	Protein involved in catabolism of external DNA	fig|6666666.229926.peg.88
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase (EC 1.3.3.1)	fig|6666666.229926.peg.843
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229926.peg.2049
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229926.peg.644
De_Novo_Pyrimidine_Synthesis	Pyrimidine operon regulatory protein PyrR	fig|6666666.229926.peg.57
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229926.peg.1706
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229926.peg.57
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229926.peg.1705
DedA_family_of_inner_membrane_proteins	DedA protein	fig|6666666.229926.peg.823
Dehydrogenase_complexes	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.229926.peg.1408
Dehydrogenase_complexes	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229926.peg.992
Dehydrogenase_complexes	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229926.peg.746
Dehydrogenase_complexes	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.229926.peg.1409
Dehydrogenase_complexes	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229926.peg.745
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose operon repressor, DeoR family	fig|6666666.229926.peg.232
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229926.peg.233
Deoxyribose_and_Deoxynucleoside_Catabolism	Na+ dependent nucleoside transporter NupC	fig|6666666.229926.peg.1273
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229926.peg.1272
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.229926.peg.1607
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.229926.peg.1635
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.229926.peg.2003
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.229926.peg.170
Di-Inositol-Phosphate_biosynthesis	Inositol-1-monophosphatase (EC 3.1.3.25)	fig|6666666.229926.peg.1331
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229926.peg.1421
Dissimilatory_nitrite_reductase	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229926.peg.2127
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229926.peg.1175
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229926.peg.2099
ECF_class_transporters	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229926.peg.983
ECF_class_transporters	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229926.peg.981
ECF_class_transporters	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229926.peg.982
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229926.peg.1078
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229926.peg.1075
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.229926.peg.5
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229926.peg.2077
Entner-Doudoroff_Pathway	Gluconokinase (EC 2.7.1.12)	fig|6666666.229926.peg.531
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.229926.peg.6
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229926.peg.454
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229926.peg.1522
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229926.peg.1985
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229926.peg.1986
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229926.peg.2137
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229926.peg.912
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229926.peg.737
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229926.peg.736
Exopolysaccharide_Biosynthesis	Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6)	fig|6666666.229926.peg.555
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59)	fig|6666666.229926.peg.951
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229926.peg.142
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229926.peg.1588
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)	fig|6666666.229926.peg.2156
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.229926.peg.1586
Fatty_Acid_Biosynthesis_FASII	4'-phosphopantetheinyl transferase (EC 2.7.8.-)	fig|6666666.229926.peg.407
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.229926.peg.695
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229926.peg.796
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.229926.peg.1589
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229926.peg.1656
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229926.peg.1657
Fatty_Acid_Biosynthesis_FASII	Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)	fig|6666666.229926.peg.1878
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.229926.peg.1587
Fermentations:_Lactate	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229926.peg.1339
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229926.peg.737
Fermentations:_Lactate	D-lactate dehydrogenase (EC 1.1.1.28)	fig|6666666.229926.peg.1939
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229926.peg.736
Fermentations:_Mixed_acid	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229926.peg.1339
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229926.peg.737
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229926.peg.1174
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229926.peg.1339
Fermentations:_Mixed_acid	D-lactate dehydrogenase (EC 1.1.1.28)	fig|6666666.229926.peg.1939
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.229926.peg.1790
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229926.peg.736
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229926.peg.1780
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229926.peg.1791
Fermentations:_Mixed_acid	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	fig|6666666.229926.peg.1793
Fermentations:_Mixed_acid	Sugar/maltose fermentation stimulation protein homolog	fig|6666666.229926.peg.712
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229926.peg.1091
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229926.peg.1199
Flavodoxin	Flavodoxin 1	fig|6666666.229926.peg.649
Flavodoxin	Flavodoxin 2	fig|6666666.229926.peg.586
Flavodoxin	Flavodoxin 2	fig|6666666.229926.peg.1537
Flavodoxin	Flavoprotein MioC	fig|6666666.229926.peg.1479
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.229926.peg.586
Flavodoxin	NAD(P)H oxidoreductase YRKL (EC 1.6.99.-)	fig|6666666.229926.peg.1537
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.229926.peg.733
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229926.peg.294
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229926.peg.337
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.229926.peg.1571
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229926.peg.797
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.229926.peg.1732
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.229926.peg.214
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229926.peg.797
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229926.peg.1819
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229926.peg.339
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229926.peg.338
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.229926.peg.1643
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.229926.peg.733
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229926.peg.968
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.229926.peg.1732
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.229926.peg.214
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229926.peg.1819
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229926.peg.1681
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229926.peg.693
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229926.peg.1413
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229926.peg.1414
Formate_dehydrogenase	Formate dehydrogenase H (EC 1.2.1.2)	fig|6666666.229926.peg.1415
Formate_dehydrogenase	Formate dehydrogenase N alpha subunit (EC 1.2.1.2)	fig|6666666.229926.peg.527
Formate_dehydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.229926.peg.526
Formate_hydrogenase	Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)	fig|6666666.229926.peg.525
Formate_hydrogenase	Formate dehydrogenase N alpha subunit (EC 1.2.1.2)	fig|6666666.229926.peg.527
Formate_hydrogenase	Formate dehydrogenase O beta subunit (EC 1.2.1.2)	fig|6666666.229926.peg.526
Formate_hydrogenase	Formate dehydrogenase chain D (EC 1.2.1.2)	fig|6666666.229926.peg.528
Formate_hydrogenase	Formate hydrogenlyase subunit 3	fig|6666666.229926.peg.521
Formate_hydrogenase	Formate hydrogenlyase subunit 5	fig|6666666.229926.peg.516
Formate_hydrogenase	Formate hydrogenlyase subunit 6	fig|6666666.229926.peg.515
Formate_hydrogenase	Formate hydrogenlyase subunit 7	fig|6666666.229926.peg.514
Formate_hydrogenase	Formate hydrogenlyase transcriptional activator	fig|6666666.229926.peg.1418
Formate_hydrogenase	formate dehydrogenase formation protein FdhE	fig|6666666.229926.peg.1026
Fructose_utilization	1-phosphofructokinase (EC 2.7.1.56)	fig|6666666.229926.peg.1541
Fructose_utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.229926.peg.710
Fructose_utilization	Fructose repressor FruR, LacI family	fig|6666666.229926.peg.760
Fructose_utilization	Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69)	fig|6666666.229926.peg.1542
Fructose_utilization	PTS system, fructose-specific IIA component (EC 2.7.1.69)	fig|6666666.229926.peg.1542
Fructose_utilization	PTS system, fructose-specific IIB component (EC 2.7.1.69)	fig|6666666.229926.peg.1540
Fructose_utilization	PTS system, fructose-specific IIC component (EC 2.7.1.69)	fig|6666666.229926.peg.1540
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229926.peg.332
Fructose_utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229926.peg.331
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.229926.peg.245
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229926.peg.467
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HybG	fig|6666666.229926.peg.898
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.229926.peg.985
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.229926.peg.986
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.229926.peg.523
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229926.peg.984
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229926.peg.1623
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.846
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.1726
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.2017
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.2027
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229926.peg.2034
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate racemase (EC 5.1.1.13)	fig|6666666.229926.peg.4
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate--ammonia ligase (EC 6.3.1.1)	fig|6666666.229926.peg.479
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229926.peg.460
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229926.peg.1352
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229926.peg.422
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.229926.peg.1717
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system	fig|6666666.229926.peg.1386
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229926.peg.1623
Glutamine_synthetases	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229926.peg.422
Glutaredoxin_3_containing_cluster	FIG136845: Rhodanese-related sulfurtransferase	fig|6666666.229926.peg.1471
Glutaredoxin_3_containing_cluster	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229926.peg.1473
Glutaredoxin_3_containing_cluster	Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state)	fig|6666666.229926.peg.1472
Glutaredoxins	Cell wall endopeptidase, family M23/M37	fig|6666666.229926.peg.1020
Glutaredoxins	Glutaredoxin 1	fig|6666666.229926.peg.1855
Glutaredoxins	Glutaredoxin 2	fig|6666666.229926.peg.188
Glutaredoxins	Glutaredoxin-related protein	fig|6666666.229926.peg.3
Glutaredoxins	Glutaredoxin-related protein	fig|6666666.229926.peg.26
Glutaredoxins	Glutaredoxin-related protein	fig|6666666.229926.peg.1907
Glutaredoxins	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229926.peg.1988
Glutathione-dependent_pathway_of_formaldehyde_detoxification	S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284)	fig|6666666.229926.peg.49
Glutathione-dependent_pathway_of_formaldehyde_detoxification	S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284)	fig|6666666.229926.peg.50
Glutathione-dependent_pathway_of_formaldehyde_detoxification	S-formylglutathione hydrolase (EC 3.1.2.12)	fig|6666666.229926.peg.48
Glutathione-regulated_potassium-efflux_system_and_associated_functions	Glutathione-regulated potassium-efflux system ATP-binding protein	fig|6666666.229926.peg.238
Glutathione-regulated_potassium-efflux_system_and_associated_functions	Glutathione-regulated potassium-efflux system ATP-binding protein	fig|6666666.229926.peg.239
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229926.peg.1030
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3)	fig|6666666.229926.peg.1703
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229926.peg.860
Glutathione:_Non-redox_reactions	FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	fig|6666666.229926.peg.682
Glutathione:_Non-redox_reactions	Glutathione S-transferase (EC 2.5.1.18)	fig|6666666.229926.peg.666
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229926.peg.683
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229926.peg.1275
Glutathione:_Redox_cycle	Glutaredoxin 1	fig|6666666.229926.peg.1855
Glutathione:_Redox_cycle	Glutaredoxin 2	fig|6666666.229926.peg.188
Glutathione:_Redox_cycle	Glutathione reductase (EC 1.8.1.7)	fig|6666666.229926.peg.89
Glutathionylspermidine_and_Trypanothione	Glutathionylspermidine amidohydrolase (EC 3.5.1.78)	fig|6666666.229926.peg.1239
Glutathionylspermidine_and_Trypanothione	Glutathionylspermidine synthase (EC 6.3.1.8)	fig|6666666.229926.peg.1239
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229926.peg.327
Glycerate_metabolism	Hydroxypyruvate isomerase (EC 5.3.1.22)	fig|6666666.229926.peg.1557
Glycerate_metabolism	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.229926.peg.340
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229926.peg.912
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229926.peg.149
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229926.peg.1796
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229926.peg.1589
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein (ACP1)	fig|6666666.229926.peg.1134
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein (ACP2)	fig|6666666.229926.peg.1135
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY	fig|6666666.229926.peg.1733
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229926.peg.1174
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229926.peg.1339
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229926.peg.148
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229926.peg.191
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8)	fig|6666666.229926.peg.1526
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.229926.peg.803
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Diacylglycerol kinase (EC 2.7.1.107)	fig|6666666.229926.peg.2039
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229926.peg.327
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate acyltransferase (EC 2.3.1.15)	fig|6666666.229926.peg.268
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229926.peg.773
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229926.peg.1473
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphate:acyl-ACP acyltransferase PlsX	fig|6666666.229926.peg.1585
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229926.peg.137
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229926.peg.150
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylglycerophosphatase A (EC 3.1.3.27)	fig|6666666.229926.peg.355
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylglycerophosphatase B (EC 3.1.3.27)	fig|6666666.229926.peg.561
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylserine decarboxylase (EC 4.1.1.65)	fig|6666666.229926.peg.1576
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229926.peg.1317
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229926.peg.1071
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229926.peg.327
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.229926.peg.1718
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229926.peg.1372
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229926.peg.1921
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229926.peg.1317
Glycine_and_Serine_Utilization	Serine transporter	fig|6666666.229926.peg.1719
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229926.peg.1392
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229926.peg.1940
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229926.peg.570
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229926.peg.817
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229926.peg.741
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229926.peg.816
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229926.peg.819
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229926.peg.818
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229926.peg.821
Glycogen_metabolism	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229926.peg.820
Glycogen_metabolism	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229926.peg.742
Glycogen_metabolism_cluster	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229926.peg.817
Glycogen_metabolism_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229926.peg.741
Glycogen_metabolism_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229926.peg.816
Glycogen_metabolism_cluster	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229926.peg.819
Glycogen_metabolism_cluster	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229926.peg.818
Glycogen_metabolism_cluster	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229926.peg.821
Glycogen_metabolism_cluster	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229926.peg.820
Glycolate,_glyoxylate_interconversions	Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD	fig|6666666.229926.peg.1903
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.229926.peg.340
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229926.peg.250
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229926.peg.1914
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229926.peg.1785
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229926.peg.2077
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229926.peg.1477
Glycolysis_and_Gluconeogenesis	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229926.peg.1929
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.229926.peg.1521
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229926.peg.349
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229926.peg.454
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229926.peg.1522
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229926.peg.1985
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229926.peg.1986
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229926.peg.2137
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229926.peg.912
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229926.peg.1649
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229926.peg.1785
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.229926.peg.2077
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11)	fig|6666666.229926.peg.1477
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229926.peg.1929
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229926.peg.349
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229926.peg.1522
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229926.peg.1985
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229926.peg.1986
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229926.peg.2137
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229926.peg.912
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229926.peg.1649
Glycyl-tRNA_synthetase	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229926.peg.27
Glycyl-tRNA_synthetase	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229926.peg.21
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229926.peg.2042
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229926.peg.1775
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229926.peg.27
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229926.peg.21
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.44
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.231
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.1569
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229926.peg.1213
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229926.peg.1007
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229926.peg.199
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229926.peg.200
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229926.peg.2031
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229926.peg.2032
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229926.peg.2159
HPr_catabolite_repression_system	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229926.peg.331
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229926.peg.199
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229926.peg.200
Heat_shock_dnaK_gene_cluster_extended	FIG001341: Probable Fe(2+)-trafficking protein YggX	fig|6666666.229926.peg.2058
Heat_shock_dnaK_gene_cluster_extended	Glutathione synthetase (EC 6.3.2.3)	fig|6666666.229926.peg.860
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229926.peg.2159
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229926.peg.1067
Heat_shock_dnaK_gene_cluster_extended	RNA polymerase sigma factor RpoH	fig|6666666.229926.peg.1228
Heat_shock_dnaK_gene_cluster_extended	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229926.peg.1069
Heat_shock_dnaK_gene_cluster_extended	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.229926.peg.2048
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229926.peg.2080
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.229926.peg.1663
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229926.peg.14
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229926.peg.1778
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229926.peg.772
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229926.peg.1955
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229926.peg.43
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229926.peg.41
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229926.peg.129
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229926.peg.637
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229926.peg.1276
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229926.peg.2158
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Paraquat-inducible protein A	fig|6666666.229926.peg.1400
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Paraquat-inducible protein B	fig|6666666.229926.peg.1399
Heme_and_Siroheme_Biosynthesis	Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	fig|6666666.229926.peg.1647
Heme_and_Siroheme_Biosynthesis	Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1)	fig|6666666.229926.peg.1901
Heme_and_Siroheme_Biosynthesis	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.229926.peg.1897
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA reductase (EC 1.2.1.70)	fig|6666666.229926.peg.684
Heme_and_Siroheme_Biosynthesis	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229926.peg.1626
Heme_and_Siroheme_Biosynthesis	Porphobilinogen deaminase (EC 2.5.1.61)	fig|6666666.229926.peg.2125
Heme_and_Siroheme_Biosynthesis	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.229926.peg.20
Heme_and_Siroheme_Biosynthesis	Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)	fig|6666666.229926.peg.1507
Heme_and_Siroheme_Biosynthesis	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229926.peg.1069
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen III decarboxylase (EC 4.1.1.37)	fig|6666666.229926.peg.2116
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)	fig|6666666.229926.peg.2127
Heme_and_Siroheme_Biosynthesis	Uroporphyrinogen-III synthase (EC 4.2.1.75)	fig|6666666.229926.peg.2126
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229926.peg.41
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229926.peg.129
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229926.peg.637
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229926.peg.1276
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229926.peg.2158
Hexose_Phosphate_Uptake_System	Hexose phosphate uptake regulatory protein UhpC	fig|6666666.229926.peg.1266
Hfl_operon	GTP-binding protein HflX	fig|6666666.229926.peg.318
Hfl_operon	HflC protein	fig|6666666.229926.peg.405
Hfl_operon	HflK protein	fig|6666666.229926.peg.406
Hfl_operon	RNA-binding protein Hfq	fig|6666666.229926.peg.319
Histidine_Biosynthesis	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.229926.peg.1106
Histidine_Biosynthesis	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.229926.peg.1107
Histidine_Biosynthesis	Histidinol-phosphatase (EC 3.1.3.15)	fig|6666666.229926.peg.1108
Histidine_Biosynthesis	Histidinol-phosphatase (EC 3.1.3.15)	fig|6666666.229926.peg.1109
Histidine_Biosynthesis	Histidinol-phosphatase (EC 3.1.3.15)	fig|6666666.229926.peg.1110
Histidine_Biosynthesis	Histidinol-phosphate aminotransferase (EC 2.6.1.9)	fig|6666666.229926.peg.1370
Histidine_Biosynthesis	Histidinol-phosphate aminotransferase (EC 2.6.1.9)	fig|6666666.229926.peg.1371
Histidine_Biosynthesis	Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)	fig|6666666.229926.peg.1112
Histidine_Biosynthesis	Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)	fig|6666666.229926.peg.1115
Histidine_Biosynthesis	Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	fig|6666666.229926.peg.1108
Histidine_Biosynthesis	Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	fig|6666666.229926.peg.1109
Histidine_Biosynthesis	Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)	fig|6666666.229926.peg.1110
Histidine_Biosynthesis	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.229926.peg.1116
Histidine_Biosynthesis	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.229926.peg.1116
Histidine_Biosynthesis	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.229926.peg.1113
Histidine_Biosynthesis	Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)	fig|6666666.229926.peg.1114
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.229926.peg.256
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229926.peg.93
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229926.peg.1067
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleotidase YfbR, HD superfamily	fig|6666666.229926.peg.998
Hydrogenases	Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-)	fig|6666666.229926.peg.1417
Hydrogenases	Fe-S-cluster-containing hydrogenase components 1	fig|6666666.229926.peg.893
Hydrogenases	Ni/Fe-hydrogenase 2 B-type cytochrome subunit	fig|6666666.229926.peg.894
Hydrogenases	Uptake hydrogenase large subunit (EC 1.12.99.6)	fig|6666666.229926.peg.895
Hydrogenases	Uptake hydrogenase small subunit precursor (EC 1.12.99.6)	fig|6666666.229926.peg.892
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229926.peg.1508
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229926.peg.463
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229926.peg.1413
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229926.peg.1415
Inositol_catabolism	5-deoxy-glucuronate isomerase (EC 5.3.1.-)	fig|6666666.229926.peg.1330
Inositol_catabolism	5-keto-2-deoxygluconokinase (EC 2.7.1.92)	fig|6666666.229926.peg.1328
Inositol_catabolism	Epi-inositol hydrolase (EC 3.7.1.-)	fig|6666666.229926.peg.1327
Inositol_catabolism	Inositol transport system ATP-binding protein	fig|6666666.229926.peg.1337
Inositol_catabolism	Inositol transport system permease protein	fig|6666666.229926.peg.1338
Inositol_catabolism	Inositol transport system sugar-binding protein	fig|6666666.229926.peg.1335
Inositol_catabolism	Inositol transport system sugar-binding protein	fig|6666666.229926.peg.1336
Inositol_catabolism	Inosose dehydratase (EC 4.2.1.44)	fig|6666666.229926.peg.1326
Inositol_catabolism	Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)	fig|6666666.229926.peg.1333
Inositol_catabolism	Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)	fig|6666666.229926.peg.1325
Inositol_catabolism	Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18)	fig|6666666.229926.peg.1334
Inositol_catabolism	Predicted transcriptional regulator of the myo-inositol catabolic operon	fig|6666666.229926.peg.1329
Inositol_catabolism	uncharacterized domain	fig|6666666.229926.peg.1328
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229926.peg.1617
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229926.peg.840
Inteins	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229926.peg.2112
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229926.peg.1611
Inteins	Translation initiation factor 2	fig|6666666.229926.peg.704
Intracellular_septation_in_Enterobacteria	Acyl-CoA thioesterase YciA, involved in membrane biogenesis	fig|6666666.229926.peg.2166
Intracellular_septation_in_Enterobacteria	Intracellular septation protein IspA	fig|6666666.229926.peg.2165
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, ATP-binding protein	fig|6666666.229926.peg.966
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, ATP-binding protein	fig|6666666.229926.peg.2052
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229926.peg.174
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229926.peg.175
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229926.peg.373
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, iron-binding protein	fig|6666666.229926.peg.2054
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229926.peg.173
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229926.peg.374
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229926.peg.965
Iron_acquisition_in_Streptococcus	Ferric iron ABC transporter, permease protein	fig|6666666.229926.peg.2053
Iron_transport_system_including_ABC_transporter	Cytochrome C553 (soluble cytochrome f)	fig|6666666.229926.peg.1884
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, ATP-binding subunit	fig|6666666.229926.peg.1886
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, substrate binding protein	fig|6666666.229926.peg.1889
Iron_transport_system_including_ABC_transporter	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229926.peg.1891
Iron_transport_system_including_ABC_transporter	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229926.peg.1890
Iron_transport_system_including_ABC_transporter	Possible periplasmic thiredoxin	fig|6666666.229926.peg.1885
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229926.peg.1005
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229926.peg.794
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229926.peg.1962
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229926.peg.135
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229926.peg.793
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229926.peg.1712
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229926.peg.254
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229926.peg.253
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229926.peg.1378
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229926.peg.1061
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229926.peg.794
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229926.peg.1962
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229926.peg.136
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229926.peg.794
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229926.peg.1962
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229926.peg.794
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229926.peg.1962
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229926.peg.794
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229926.peg.1962
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229926.peg.794
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229926.peg.1962
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229926.peg.136
KDO2-Lipid_A_biosynthesis	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.229926.peg.207
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45)	fig|6666666.229926.peg.881
KDO2-Lipid_A_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.229926.peg.261
KDO2-Lipid_A_biosynthesis	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.229926.peg.726
KDO2-Lipid_A_biosynthesis	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.229926.peg.143
KDO2-Lipid_A_biosynthesis	Arabinose 5-phosphate isomerase (EC 5.3.1.13)	fig|6666666.229926.peg.880
KDO2-Lipid_A_biosynthesis	DNA internalization-related competence protein ComEC/Rec2	fig|6666666.229926.peg.730
KDO2-Lipid_A_biosynthesis	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229926.peg.66
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-)	fig|6666666.229926.peg.657
KDO2-Lipid_A_biosynthesis	Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-)	fig|6666666.229926.peg.588
KDO2-Lipid_A_biosynthesis	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25)	fig|6666666.229926.peg.600
KDO2-Lipid_A_biosynthesis	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.229926.peg.145
KDO2-Lipid_A_biosynthesis	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.229926.peg.445
KDO2-Lipid_A_biosynthesis	LptA, protein essential for LPS transport across the periplasm	fig|6666666.229926.peg.444
KDO2-Lipid_A_biosynthesis	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.229926.peg.728
KDO2-Lipid_A_biosynthesis	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.229926.peg.1797
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108)	fig|6666666.229926.peg.1187
KDO2-Lipid_A_biosynthesis	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.229926.peg.141
KDO2-Lipid_A_biosynthesis_cluster_2	3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38)	fig|6666666.229926.peg.726
KDO2-Lipid_A_biosynthesis_cluster_2	DNA internalization-related competence protein ComEC/Rec2	fig|6666666.229926.peg.730
KDO2-Lipid_A_biosynthesis_cluster_2	FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster	fig|6666666.229926.peg.727
KDO2-Lipid_A_biosynthesis_cluster_2	Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25)	fig|6666666.229926.peg.600
KDO2-Lipid_A_biosynthesis_cluster_2	Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130)	fig|6666666.229926.peg.728
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229926.peg.288
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229926.peg.289
L-Arabinose_utilization	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)	fig|6666666.229926.peg.1852
L-ascorbate_utilization_(and_related_gene_clusters)	3-keto-L-gulonate 6-phosphate decarboxylase	fig|6666666.229926.peg.1846
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate utilization transcriptional regulator UlaR, HTH-type	fig|6666666.229926.peg.1850
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	fig|6666666.229926.peg.1847
L-ascorbate_utilization_(and_related_gene_clusters)	Ascorbate-specific PTS system, EIIC component	fig|6666666.229926.peg.1848
L-ascorbate_utilization_(and_related_gene_clusters)	L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)	fig|6666666.229926.peg.1852
L-ascorbate_utilization_(and_related_gene_clusters)	L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-)	fig|6666666.229926.peg.1851
L-ascorbate_utilization_(and_related_gene_clusters)	L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-)	fig|6666666.229926.peg.2141
L-ascorbate_utilization_(and_related_gene_clusters)	Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G)	fig|6666666.229926.peg.1849
L-rhamnose_utilization	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229926.peg.1375
LMPTP_YfkJ_cluster	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.229926.peg.469
LOS_core_oligosaccharide_biosynthesis	3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-)	fig|6666666.229926.peg.261
LOS_core_oligosaccharide_biosynthesis	ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)	fig|6666666.229926.peg.1242
LOS_core_oligosaccharide_biosynthesis	ADP-heptose synthase (EC 2.7.-.-)	fig|6666666.229926.peg.589
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229926.peg.264
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229926.peg.1240
LOS_core_oligosaccharide_biosynthesis	ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-)	fig|6666666.229926.peg.2035
LOS_core_oligosaccharide_biosynthesis	Beta-1,4-galactosyltransferase	fig|6666666.229926.peg.101
LOS_core_oligosaccharide_biosynthesis	D-glycero-beta-D-manno-heptose 7-phosphate kinase	fig|6666666.229926.peg.589
LOS_core_oligosaccharide_biosynthesis	O-antigen ligase	fig|6666666.229926.peg.1519
LOS_core_oligosaccharide_biosynthesis	Phosphoheptose isomerase (EC 5.3.1.-)	fig|6666666.229926.peg.769
LOS_core_oligosaccharide_biosynthesis	Phosphoheptose isomerase 1 (EC 5.3.1.-)	fig|6666666.229926.peg.1208
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229926.peg.1530
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229926.peg.1532
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229926.peg.1531
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229926.peg.1529
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229926.peg.1534
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229926.peg.1533
Lactate_utilization	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229926.peg.1375
Lactate_utilization	L-lactate permease	fig|6666666.229926.peg.1374
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229926.peg.690
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229926.peg.222
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229926.peg.221
Lactose_and_Galactose_Uptake_and_Utilization	Galactose operon repressor, GalR-LacI family of transcriptional regulators	fig|6666666.229926.peg.2150
Lactose_and_Galactose_Uptake_and_Utilization	Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)	fig|6666666.229926.peg.2149
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229926.peg.2152
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)	fig|6666666.229926.peg.2151
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	fig|6666666.229926.peg.2153
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229926.peg.690
Lactose_utilization	Galactoside O-acetyltransferase (EC 2.3.1.18)	fig|6666666.229926.peg.1253
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229926.peg.1005
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229926.peg.1005
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229926.peg.747
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229926.peg.1602
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229926.peg.1920
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.229926.peg.1601
Lipoic_acid_metabolism	Proposed lipoate regulatory protein YbeD	fig|6666666.229926.peg.1600
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.229926.peg.1602
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.229926.peg.1601
Lipoic_acid_synthesis_cluster	Proposed lipoate regulatory protein YbeD	fig|6666666.229926.peg.1600
Lipoic_acid_synthesis_cluster	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229926.peg.616
Lipopolysaccharide_assembly	LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B)	fig|6666666.229926.peg.66
Lipopolysaccharide_assembly	Lipopolysaccharide ABC transporter, ATP-binding protein LptB	fig|6666666.229926.peg.445
Lipopolysaccharide_assembly	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229926.peg.343
Lipopolysaccharide_assembly	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229926.peg.342
Lipopolysaccharide_assembly	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229926.peg.344
Lipopolysaccharide_assembly	LptA, protein essential for LPS transport across the periplasm	fig|6666666.229926.peg.444
Lipopolysaccharide_assembly	Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex	fig|6666666.229926.peg.2092
Lipopolysaccharide_assembly	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229926.peg.1388
Lipopolysaccharide_assembly	Outer membrane protein H precursor	fig|6666666.229926.peg.140
Lipopolysaccharide_assembly	Outer membrane protein Imp, required for envelope biogenesis	fig|6666666.229926.peg.1424
Lipopolysaccharide_assembly	Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL)	fig|6666666.229926.peg.417
Lipopolysaccharide_assembly	Outer membrane protein assembly factor YaeT precursor	fig|6666666.229926.peg.139
Lipopolysaccharide_assembly	Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB)	fig|6666666.229926.peg.295
Lipopolysaccharide_assembly	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229926.peg.58
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, ATP-binding protein YrbF	fig|6666666.229926.peg.435
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, auxiliary component YrbC	fig|6666666.229926.peg.432
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, periplasmic component YrbD	fig|6666666.229926.peg.433
Lipopolysaccharide_assembly	Uncharacterized ABC transporter, permease component YrbE	fig|6666666.229926.peg.434
Lipopolysaccharide_assembly	Uncharacterized protein YrbK clustered with lipopolysaccharide transporters	fig|6666666.229926.peg.443
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229926.peg.152
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229926.peg.1062
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229926.peg.1642
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229926.peg.343
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229926.peg.342
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229926.peg.344
Lipoprotein_sorting_system	Outer membrane lipoprotein carrier protein LolA	fig|6666666.229926.peg.1388
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229926.peg.142
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.229926.peg.143
Llipid_A_biosynthesis_cluster	FIG053235: Diacylglucosamine hydrolase like	fig|6666666.229926.peg.1963
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.229926.peg.145
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.229926.peg.140
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.229926.peg.139
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.229926.peg.1797
Llipid_A_biosynthesis_cluster	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-)	fig|6666666.229926.peg.141
LysR-family_proteins_in_Escherichia_coli	Cys regulon transcriptional activator CysB	fig|6666666.229926.peg.753
LysR-family_proteins_in_Escherichia_coli	Glycine cleavage system transcriptional activator GcvA	fig|6666666.229926.peg.1004
LysR-family_proteins_in_Escherichia_coli	HTH-type transcriptional regulator IlvY	fig|6666666.229926.peg.117
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.229926.peg.1466
LysR-family_proteins_in_Escherichia_coli	Transcriptional activator MetR	fig|6666666.229926.peg.633
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	HTH-type transcriptional regulator IlvY	fig|6666666.229926.peg.117
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.229926.peg.1466
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Transcriptional activator MetR	fig|6666666.229926.peg.633
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.229926.peg.754
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.229926.peg.357
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.229926.peg.418
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229926.peg.1120
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229926.peg.1831
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.229926.peg.411
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229926.peg.1427
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229926.peg.1127
Lysine_Biosynthesis_DAP_Pathway	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229926.peg.1183
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	fig|6666666.229926.peg.754
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.229926.peg.357
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.229926.peg.418
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229926.peg.1120
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229926.peg.1831
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.229926.peg.411
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229926.peg.1427
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate epimerase (EC 5.1.1.7)	fig|6666666.229926.peg.1127
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18)	fig|6666666.229926.peg.1183
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.229926.peg.1803
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229926.peg.1092
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229926.peg.1632
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229926.peg.1091
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229926.peg.1093
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229926.peg.1095
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.44
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.231
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.1569
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229926.peg.303
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229926.peg.1437
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229926.peg.741
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229926.peg.816
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229926.peg.222
Maltose_and_Maltodextrin_Utilization	Alpha-glucosidase (EC 3.2.1.20)	fig|6666666.229926.peg.1081
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229926.peg.821
Maltose_and_Maltodextrin_Utilization	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229926.peg.742
Maltose_and_Maltodextrin_Utilization	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)	fig|6666666.229926.peg.1151
Maltose_and_Maltodextrin_Utilization	Maltose operon periplasmic protein MalM	fig|6666666.229926.peg.1150
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.229926.peg.1154
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.229926.peg.1155
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229926.peg.1153
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19)	fig|6666666.229926.peg.1152
Maltose_and_Maltodextrin_Utilization	Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon	fig|6666666.229926.peg.923
Maltose_and_Maltodextrin_Utilization	Periplasmic alpha-amylase (EC 3.2.1.1)	fig|6666666.229926.peg.376
Maltose_and_Maltodextrin_Utilization	Transcriptional activator of maltose regulon, MalT	fig|6666666.229926.peg.743
Maltose_utilization_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229926.peg.741
Maltose_utilization_cluster	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229926.peg.816
Maltose_utilization_cluster	Maltodextrin phosphorylase (EC 2.4.1.1)	fig|6666666.229926.peg.742
Maltose_utilization_cluster	Transcriptional activator of maltose regulon, MalT	fig|6666666.229926.peg.743
Mannitol_Utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.229926.peg.710
Mannitol_Utilization	Mannitol operon repressor	fig|6666666.229926.peg.1324
Mannitol_Utilization	Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)	fig|6666666.229926.peg.1323
Mannitol_Utilization	PTS system, mannitol-specific IIA component (EC 2.7.1.69)	fig|6666666.229926.peg.1322
Mannitol_Utilization	PTS system, mannitol-specific IIB component (EC 2.7.1.69)	fig|6666666.229926.peg.1322
Mannitol_Utilization	PTS system, mannitol-specific IIC component (EC 2.7.1.69)	fig|6666666.229926.peg.1322
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229926.peg.332
Mannitol_Utilization	Phosphotransferase system, phosphocarrier protein HPr	fig|6666666.229926.peg.331
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.229926.peg.679
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.229926.peg.1246
Mannose_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229926.peg.1504
Mannose_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229926.peg.1969
Mannose_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229926.peg.1968
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.229926.peg.2083
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229926.peg.1765
Menaquinone_and_Phylloquinone_Biosynthesis	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.229926.peg.1685
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.229926.peg.1724
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	fig|6666666.229926.peg.1723
Menaquinone_and_Phylloquinone_Biosynthesis	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.229926.peg.1725
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.229926.peg.1650
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229926.peg.1653
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.229926.peg.652
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229926.peg.1765
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.229926.peg.1685
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.229926.peg.1724
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)	fig|6666666.229926.peg.1723
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.229926.peg.1725
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.229926.peg.1650
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229926.peg.1653
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.229926.peg.652
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229926.peg.1599
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229926.peg.1820
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229926.peg.1821
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229926.peg.1198
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229926.peg.1197
Methicillin_resistance_in_Staphylococci	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229926.peg.1898
Methionine_Biosynthesis	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229926.peg.989
Methionine_Biosynthesis	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)	fig|6666666.229926.peg.631
Methionine_Biosynthesis	Cystathionine beta-lyase (EC 4.4.1.8)	fig|6666666.229926.peg.192
Methionine_Biosynthesis	Cystathionine gamma-synthase (EC 2.5.1.48)	fig|6666666.229926.peg.1938
Methionine_Biosynthesis	Cysteine synthase (EC 2.5.1.47)	fig|6666666.229926.peg.1101
Methionine_Biosynthesis	Homoserine O-acetyltransferase (EC 2.3.1.31)	fig|6666666.229926.peg.758
Methionine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.229926.peg.411
Methionine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229926.peg.410
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.229926.peg.1320
Methionine_Biosynthesis	Methionine ABC transporter ATP-binding protein	fig|6666666.229926.peg.2013
Methionine_Biosynthesis	Methionine ABC transporter permease protein	fig|6666666.229926.peg.2012
Methionine_Biosynthesis	Methionine ABC transporter substrate-binding protein	fig|6666666.229926.peg.2011
Methionine_Biosynthesis	Methionine repressor MetJ	fig|6666666.229926.peg.2081
Methionine_Biosynthesis	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229926.peg.978
Methionine_Biosynthesis	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229926.peg.1721
Methionine_Biosynthesis	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229926.peg.1255
Methionine_Biosynthesis	Serine acetyltransferase (EC 2.3.1.30)	fig|6666666.229926.peg.1474
Methionine_Biosynthesis	Transcriptional activator MetR	fig|6666666.229926.peg.633
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229926.peg.1320
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229926.peg.2013
Methionine_Degradation	Methionine ABC transporter permease protein	fig|6666666.229926.peg.2012
Methionine_Degradation	Methionine ABC transporter substrate-binding protein	fig|6666666.229926.peg.2011
Methionine_Degradation	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229926.peg.745
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229926.peg.978
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229926.peg.1721
Methionine_Degradation	S-ribosylhomocysteine lyase (EC 4.4.1.21)	fig|6666666.229926.peg.1255
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229926.peg.978
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229926.peg.683
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229926.peg.1275
Methylglyoxal_Metabolism	Methylglyoxal synthase (EC 4.2.3.3)	fig|6666666.229926.peg.609
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229926.peg.470
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229926.peg.1964
Molybdenum_cofactor_biosynthesis	DNA-binding domain of ModE	fig|6666666.229926.peg.996
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229926.peg.1819
Molybdenum_cofactor_biosynthesis	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229926.peg.560
Molybdenum_cofactor_biosynthesis	Molybdate-binding domain of ModE	fig|6666666.229926.peg.862
Molybdenum_cofactor_biosynthesis	Molybdate-binding domain of ModE	fig|6666666.229926.peg.996
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.229926.peg.995
Molybdenum_cofactor_biosynthesis	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	fig|6666666.229926.peg.1836
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.229926.peg.931
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.229926.peg.930
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.229926.peg.929
Molybdenum_cofactor_biosynthesis	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.229926.peg.928
Molybdenum_cofactor_biosynthesis	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	fig|6666666.229926.peg.993
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.229926.peg.994
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.229926.peg.1837
Molybdenum_cofactor_biosynthesis	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	fig|6666666.229926.peg.1838
Molybdenum_cofactor_biosynthesis	Molybdenum transport system protein ModD	fig|6666666.229926.peg.1840
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis molybdochelatase MogA	fig|6666666.229926.peg.151
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeA	fig|6666666.229926.peg.1818
Molybdenum_cofactor_biosynthesis	Molybdopterin biosynthesis protein MoeB	fig|6666666.229926.peg.1817
Molybdenum_cofactor_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.229926.peg.1544
Molybdenum_cofactor_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobB	fig|6666666.229926.peg.1419
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229926.peg.1653
MukBEF_Chromosome_Condensation	Chromosome partition protein MukB	fig|6666666.229926.peg.831
MukBEF_Chromosome_Condensation	Chromosome partition protein MukE	fig|6666666.229926.peg.830
MukBEF_Chromosome_Condensation	Chromosome partition protein MukF	fig|6666666.229926.peg.828
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Inner membrane component of tripartite multidrug resistance system	fig|6666666.229926.peg.1874
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Membrane fusion component of tripartite multidrug resistance system	fig|6666666.229926.peg.1875
Multidrug_Resistance,_Tripartite_Systems_Found_in_Gram_Negative_Bacteria	Outer membrane component of tripartite multidrug resistance system	fig|6666666.229926.peg.858
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.229926.peg.110
Multidrug_Resistance_Efflux_Pumps	Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-)	fig|6666666.229926.peg.810
Multidrug_Resistance_Efflux_Pumps	Macrolide-specific efflux protein MacA	fig|6666666.229926.peg.811
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229926.peg.1827
Multidrug_Resistance_Efflux_Pumps	RND efflux system, outer membrane lipoprotein CmeC	fig|6666666.229926.peg.809
Multidrug_efflux_pump_in_Campylobacter_jejuni_(CmeABC_operon)	RND efflux system, outer membrane lipoprotein CmeC	fig|6666666.229926.peg.809
Murein_Hydrolases	Beta N-acetyl-glucosaminidase (EC 3.2.1.52)	fig|6666666.229926.peg.1787
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229926.peg.1599
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229926.peg.1820
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229926.peg.1821
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-)	fig|6666666.229926.peg.1926
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)	fig|6666666.229926.peg.546
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-)	fig|6666666.229926.peg.2059
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229926.peg.322
Murein_Hydrolases	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	fig|6666666.229926.peg.1156
Murein_hydrolase_regulation_and_cell_death	Antiholin-like protein LrgA	fig|6666666.229926.peg.593
Murein_hydrolase_regulation_and_cell_death	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229926.peg.1393
Murein_hydrolase_regulation_and_cell_death	LrgA-associated membrane protein LrgB	fig|6666666.229926.peg.594
Murein_hydrolase_regulation_and_cell_death	LysR family regulatory protein CidR	fig|6666666.229926.peg.1538
Murein_hydrolase_regulation_and_cell_death	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229926.peg.1161
Murein_hydrolase_regulation_and_cell_death	tRNA-dihydrouridine synthase C (EC 1.-.-.-)	fig|6666666.229926.peg.2051
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229926.peg.1528
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229926.peg.1527
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229926.peg.114
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229926.peg.113
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229926.peg.112
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229926.peg.1515
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229926.peg.1785
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229926.peg.157
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Tagatose 1,6-bisphosphate aldolase (EC 4.1.2.40)	fig|6666666.229926.peg.785
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229926.peg.690
NADPH:quinone_oxidoreductase_2	NADPH:quinone oxidoreductase 2	fig|6666666.229926.peg.1481
NADPH:quinone_oxidoreductase_2	Redox-sensing transcriptional regulator QorR	fig|6666666.229926.peg.1482
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229926.peg.1181
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229926.peg.2161
NAD_and_NADP_cofactor_biosynthesis_global	NMN 5'-nucleotidase, extracellular (EC 3.1.3.5)	fig|6666666.229926.peg.1923
NAD_and_NADP_cofactor_biosynthesis_global	NMN phosphatase (EC 3.1.3.5)	fig|6666666.229926.peg.1979
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamide phosphoribosyltransferase (EC 2.4.2.12)	fig|6666666.229926.peg.413
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1)	fig|6666666.229926.peg.1512
NAD_and_NADP_cofactor_biosynthesis_global	Ribosyl nicotinamide transporter, PnuC-like	fig|6666666.229926.peg.1258
NAD_and_NADP_cofactor_biosynthesis_global	Ribosylnicotinamide kinase (EC 2.7.1.22)	fig|6666666.229926.peg.1512
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.229926.peg.1010
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229926.peg.1011
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.229926.peg.1012
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229926.peg.1013
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.229926.peg.1015
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.229926.peg.1014
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229926.peg.2065
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229926.peg.2066
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229926.peg.2067
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229926.peg.2068
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229926.peg.2069
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.229926.peg.2070
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Probable exported or periplasmic protein in ApbE locus	fig|6666666.229926.peg.2073
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	fig|6666666.229926.peg.902
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.229926.peg.903
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)	fig|6666666.229926.peg.901
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Na+/H+ antiporter NhaA type	fig|6666666.229926.peg.1159
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HybG	fig|6666666.229926.peg.898
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypD	fig|6666666.229926.peg.985
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypE	fig|6666666.229926.peg.986
NiFe_hydrogenase_maturation	[NiFe] hydrogenase metallocenter assembly protein HypF	fig|6666666.229926.peg.523
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HybF	fig|6666666.229926.peg.689
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229926.peg.984
Nitric_oxide_synthase	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229926.peg.1737
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229926.peg.135
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229926.peg.793
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229926.peg.1712
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229926.peg.254
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229926.peg.253
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229926.peg.1378
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229926.peg.1061
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229926.peg.2087
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP compounds hydrolase NudE (EC 3.6.1.-)	fig|6666666.229926.peg.12
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229926.peg.1181
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229926.peg.1640
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229926.peg.93
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)	fig|6666666.229926.peg.68
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	NADH pyrophosphatase (EC 3.6.1.22)	fig|6666666.229926.peg.2117
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229926.peg.702
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229926.peg.705
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229926.peg.703
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229926.peg.704
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229926.peg.989
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229926.peg.294
One-carbon_metabolism_by_tetrahydropterines	Formyltetrahydrofolate deformylase (EC 3.5.1.10)	fig|6666666.229926.peg.970
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229926.peg.2030
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229926.peg.2030
Orphan_regulatory_proteins	Copper sensory histidine kinase CpxA	fig|6666666.229926.peg.2094
Orphan_regulatory_proteins	Copper-sensing two-component system response regulator CpxR	fig|6666666.229926.peg.2093
Orphan_regulatory_proteins	DNA transformation protein TfoX	fig|6666666.229926.peg.1227
Orphan_regulatory_proteins	Glycine cleavage system transcriptional activator GcvA	fig|6666666.229926.peg.1004
Orphan_regulatory_proteins	Sensory histidine kinase QseC	fig|6666666.229926.peg.1029
Orphan_regulatory_proteins	Two-component system response regulator QseB	fig|6666666.229926.peg.1028
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229926.peg.675
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229926.peg.777
Osmoregulation	Outer membrane protein A precursor	fig|6666666.229926.peg.1904
Osmotic_stress_cluster	Heat shock (predicted periplasmic) protein YciM, precursor	fig|6666666.229926.peg.643
Osmotic_stress_cluster	Osmotically inducible lipoprotein B precursor	fig|6666666.229926.peg.220
Osmotic_stress_cluster	Phosphatidylglycerophosphatase B (EC 3.1.3.27)	fig|6666666.229926.peg.561
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.229926.peg.1263
Oxidative_stress	Catalase (EC 1.11.1.6)	fig|6666666.229926.peg.1622
Oxidative_stress	Ferric uptake regulation protein FUR	fig|6666666.229926.peg.648
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.229926.peg.1876
Oxidative_stress	Fumarate and nitrate reduction regulatory protein	fig|6666666.229926.peg.837
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.229926.peg.1466
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.229926.peg.1876
Oxidative_stress	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229926.peg.1737
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.229926.peg.1876
Oxidative_stress	Paraquat-inducible protein A	fig|6666666.229926.peg.1400
Oxidative_stress	Paraquat-inducible protein B	fig|6666666.229926.peg.1399
Oxidative_stress	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.229926.peg.1764
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.229926.peg.1
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.229926.peg.5
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.229926.peg.6
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229926.peg.1070
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229926.peg.1377
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229926.peg.251
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.229926.peg.245
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.229926.peg.243
Pentose_phosphate_pathway	Transketolase, C-terminal section (EC 2.2.1.1)	fig|6666666.229926.peg.604
Pentose_phosphate_pathway	Transketolase, N-terminal section (EC 2.2.1.1)	fig|6666666.229926.peg.603
Peptide_methionine_sulfoxide_reductase	Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase	fig|6666666.229926.peg.765
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229926.peg.766
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229926.peg.766
Peptide_methionine_sulfoxide_reductase	Thiol:disulfide oxidoreductase associated with MetSO reductase	fig|6666666.229926.peg.764
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229926.peg.1199
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229926.peg.1191
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229926.peg.1599
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229926.peg.1820
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229926.peg.1821
Peptidoglycan_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229926.peg.1451
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229926.peg.460
Peptidoglycan_Biosynthesis	Glutamine synthetase type I (EC 6.3.1.2)	fig|6666666.229926.peg.422
Peptidoglycan_Biosynthesis	Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)	fig|6666666.229926.peg.546
Peptidoglycan_Biosynthesis	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.229926.peg.1158
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229926.peg.87
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229926.peg.1845
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229926.peg.1892
Peptidoglycan_Biosynthesis	Murein-DD-endopeptidase (EC 3.4.99.-)	fig|6666666.229926.peg.827
Peptidoglycan_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229926.peg.1451
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229926.peg.1596
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.229926.peg.1196
Peptidoglycan_Biosynthesis	Rare lipoprotein A precursor	fig|6666666.229926.peg.1598
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.229926.peg.1597
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229926.peg.1230
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229926.peg.429
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229926.peg.1193
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229926.peg.1192
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229926.peg.1195
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229926.peg.1198
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229926.peg.1197
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229926.peg.1191
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229926.peg.1192
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)	fig|6666666.229926.peg.1928
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229926.peg.1195
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229926.peg.1198
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229926.peg.1197
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.229926.peg.1918
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.229926.peg.1575
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229926.peg.1463
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229926.peg.467
Peptidyl-prolyl_cis-trans_isomerase	Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8)	fig|6666666.229926.peg.1604
Peptidyl-prolyl_cis-trans_isomerase	Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)	fig|6666666.229926.peg.1704
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229926.peg.58
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229926.peg.140
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegQ, serine protease	fig|6666666.229926.peg.676
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegS	fig|6666666.229926.peg.999
Periplasmic_Stress_Response	Sigma factor RpoE negative regulatory protein RseA	fig|6666666.229926.peg.1447
Periplasmic_Stress_Response	Sigma factor RpoE negative regulatory protein RseB precursor	fig|6666666.229926.peg.1448
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229926.peg.58
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase	fig|6666666.229926.peg.1748
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.229926.peg.1945
Periplasmic_disulfide_interchange	Periplasmic thiol:disulfide interchange protein DsbA	fig|6666666.229926.peg.1546
Periplasmic_disulfide_interchange	Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation	fig|6666666.229926.peg.1729
Periplasmic_disulfide_interchange	Thiol:disulfide interchange protein DsbC	fig|6666666.229926.peg.975
Persister_Cells	Cell division inhibitor	fig|6666666.229926.peg.1009
Persister_Cells	HipA protein	fig|6666666.229926.peg.1869
Persister_Cells	HipA protein	fig|6666666.229926.peg.1870
Persister_Cells	HipA protein	fig|6666666.229926.peg.1871
Persister_Cells	HipB protein	fig|6666666.229926.peg.1873
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229926.peg.1303
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.229926.peg.1370
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)	fig|6666666.229926.peg.1371
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229926.peg.750
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229926.peg.1186
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229926.peg.750
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57)	fig|6666666.229926.peg.1366
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.229926.peg.1186
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Transcriptional repressor protein TyrR	fig|6666666.229926.peg.317
Phosphate_metabolism	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229926.peg.2120
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.229926.peg.1976
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229926.peg.713
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.229926.peg.714
Phosphate_metabolism	Phosphate transport regulator (distant homolog of PhoU)	fig|6666666.229926.peg.1383
Phosphate_metabolism	Probable low-affinity inorganic phosphate transporter	fig|6666666.229926.peg.1382
Phosphoglycerate_mutase_protein_family	Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)	fig|6666666.229926.peg.1640
Phosphoglycerate_mutase_protein_family	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229926.peg.1988
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229926.peg.1985
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229926.peg.1986
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229926.peg.2137
Phosphoglycerate_mutase_protein_family	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229926.peg.1989
Phosphoglycerate_transport_system	Phosphoglycerate transport regulatory protein PgtC	fig|6666666.229926.peg.962
Phosphoglycerate_transport_system	Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-)	fig|6666666.229926.peg.961
Phosphoglycerate_transport_system	Phosphoglycerate transport system transcriptional regulatory protein PgtA	fig|6666666.229926.peg.960
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60)	fig|6666666.229926.peg.1147
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] reductase (EC 1.1.1.100)	fig|6666666.229926.peg.1148
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] synthase	fig|6666666.229926.peg.1132
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like	fig|6666666.229926.peg.1146
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Acyl carrier protein (ACP1)	fig|6666666.229926.peg.1134
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Acyl carrier protein (ACP2)	fig|6666666.229926.peg.1135
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein	fig|6666666.229926.peg.1142
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG017861: hypothetical protein	fig|6666666.229926.peg.1137
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase	fig|6666666.229926.peg.1133
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG021862: membrane protein, exporter	fig|6666666.229926.peg.1144
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG027190: Putative transmembrane protein	fig|6666666.229926.peg.1143
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG085779: Lipoprotein	fig|6666666.229926.peg.1145
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41)	fig|6666666.229926.peg.1149
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIG143263: Glycosyl transferase	fig|6666666.229926.peg.1139
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase	fig|6666666.229926.peg.1136
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase	fig|6666666.229926.peg.1138
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Lysophospholipid acyltransferase	fig|6666666.229926.peg.1140
Phospholipid_and_Fatty_acid_biosynthesis_related_cluster	Lysophospholipid acyltransferase	fig|6666666.229926.peg.1141
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229926.peg.310
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229926.peg.1997
Poly-gamma-glutamate_biosynthesis	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229926.peg.1030
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229926.peg.460
Polyadenylation_bacterial	Poly(A) polymerase (EC 2.7.7.19)	fig|6666666.229926.peg.732
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229926.peg.1678
Polyadenylation_bacterial	RNA-binding protein Hfq	fig|6666666.229926.peg.319
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229926.peg.1380
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229926.peg.978
Polyamine_Metabolism	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	fig|6666666.229926.peg.1394
Polyamine_Metabolism	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	fig|6666666.229926.peg.1493
Polyamine_Metabolism	Arginine/ornithine antiporter ArcD	fig|6666666.229926.peg.484
Polyamine_Metabolism	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229926.peg.483
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229926.peg.1397
Polyamine_Metabolism	Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)	fig|6666666.229926.peg.1396
Polyamine_Metabolism	Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)	fig|6666666.229926.peg.1395
Polyhydroxybutyrate_metabolism	D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)	fig|6666666.229926.peg.1560
Polyphosphate	Exopolyphosphatase (EC 3.6.1.11)	fig|6666666.229926.peg.2120
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229926.peg.794
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229926.peg.1962
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229926.peg.794
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229926.peg.1962
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229926.peg.136
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229926.peg.1463
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229926.peg.467
Potassium_homeostasis	Glutathione-regulated potassium-efflux system ATP-binding protein	fig|6666666.229926.peg.238
Potassium_homeostasis	Glutathione-regulated potassium-efflux system ATP-binding protein	fig|6666666.229926.peg.239
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.229926.peg.464
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229926.peg.653
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229926.peg.1508
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229926.peg.1508
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229926.peg.463
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229926.peg.463
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	LSU ribosomal protein L9p	fig|6666666.229926.peg.274
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	Primosomal replication protein N	fig|6666666.229926.peg.272
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	SSU ribosomal protein S18p	fig|6666666.229926.peg.273
Primosomal_replication_protein_N_clusters_with_ribosomal_proteins	SSU ribosomal protein S6p	fig|6666666.229926.peg.271
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229926.peg.973
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229926.peg.973
Proline,_4-hydroxyproline_uptake_and_utilization	ProQ: influences osmotic activation of compatible solute ProP	fig|6666666.229926.peg.1401
Proline,_4-hydroxyproline_uptake_and_utilization	Proline/sodium symporter PutP (TC 2.A.21.2.1)	fig|6666666.229926.peg.186
Proline_Synthesis	Gamma-glutamyl phosphate reductase (EC 1.2.1.41)	fig|6666666.229926.peg.1933
Proline_Synthesis	Glutamate 5-kinase (EC 2.7.2.11)	fig|6666666.229926.peg.1574
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229926.peg.1623
Proline_Synthesis	Pyrroline-5-carboxylate reductase (EC 1.5.1.2)	fig|6666666.229926.peg.1808
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229926.peg.736
Proteasome_bacterial	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229926.peg.1698
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229926.peg.1699
Proteasome_bacterial	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229926.peg.1981
Proteasome_bacterial	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229926.peg.1980
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229926.peg.1090
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229926.peg.952
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.229926.peg.1263
Protection_from_Reactive_Oxygen_Species	Catalase (EC 1.11.1.6)	fig|6666666.229926.peg.1622
Protection_from_Reactive_Oxygen_Species	Cytochrome c551 peroxidase (EC 1.11.1.5)	fig|6666666.229926.peg.580
Protection_from_Reactive_Oxygen_Species	Manganese superoxide dismutase (EC 1.15.1.1)	fig|6666666.229926.peg.1737
Protection_from_Reactive_Oxygen_Species	Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)	fig|6666666.229926.peg.1764
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229926.peg.199
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229926.peg.200
Protein_chaperones	Chaperone protein HscA	fig|6666666.229926.peg.163
Protein_chaperones	Chaperone protein HscB	fig|6666666.229926.peg.164
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229926.peg.1185
Protein_chaperones	ClpB protein	fig|6666666.229926.peg.77
Protein_chaperones	ClpB protein	fig|6666666.229926.peg.1122
Protein_chaperones	ClpB protein	fig|6666666.229926.peg.1123
Protein_chaperones	DnaJ-class molecular chaperone CbpA	fig|6666666.229926.peg.181
Protein_chaperones	DnaJ-class molecular chaperone CbpA	fig|6666666.229926.peg.182
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229926.peg.2159
Protein_deglycation	Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48)	fig|6666666.229926.peg.469
Protein_deglycation	Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation	fig|6666666.229926.peg.778
Protein_degradation	Oligopeptidase A (EC 3.4.24.70)	fig|6666666.229926.peg.334
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229926.peg.1698
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229926.peg.1699
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229926.peg.1981
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229926.peg.1980
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229926.peg.1090
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229926.peg.952
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229926.peg.77
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229926.peg.1122
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229926.peg.1123
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229926.peg.1385
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegQ, serine protease	fig|6666666.229926.peg.676
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegS	fig|6666666.229926.peg.999
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229926.peg.794
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229926.peg.1962
Protocatechuate_branch_of_beta-ketoadipate_pathway	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.229926.peg.53
Purine_Utilization	Guanine-hypoxanthine permease	fig|6666666.229926.peg.692
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229926.peg.1025
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229926.peg.1244
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229926.peg.658
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229926.peg.686
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229926.peg.54
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.229926.peg.184
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.229926.peg.697
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.229926.peg.455
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229926.peg.1681
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229926.peg.218
Purine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229926.peg.156
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229926.peg.1272
Purine_conversions	Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)	fig|6666666.229926.peg.1422
Purine_nucleotide_synthesis_regulator	Purine nucleotide synthesis repressor	fig|6666666.229926.peg.757
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229926.peg.448
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229926.peg.795
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229926.peg.218
Putative_TldE-TldD_proteolytic_complex	FIG138315: Putative alpha helix protein	fig|6666666.229926.peg.1683
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229926.peg.1841
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229926.peg.1682
Putative_sugar_ABC_transporter_(ytf_cluster)	Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11)	fig|6666666.229926.peg.1929
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229926.peg.766
Putative_sugar_ABC_transporter_(ytf_cluster)	Uncharacterized protein YtfM precursor	fig|6666666.229926.peg.2122
Putative_sugar_ABC_transporter_(ytf_cluster)	Uncharacterized protein YtfN	fig|6666666.229926.peg.2121
Pyrene_degradation	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)	fig|6666666.229926.peg.53
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229926.peg.793
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229926.peg.1071
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229926.peg.454
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229926.peg.1372
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxal kinase (EC 2.7.1.35)	fig|6666666.229926.peg.694
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)	fig|6666666.229926.peg.1265
Pyrimidine_utilization	Uracil permease	fig|6666666.229926.peg.1706
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase, biosynthetic (EC 5.1.1.1)	fig|6666666.229926.peg.348
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229926.peg.1005
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.229926.peg.1718
Pyruvate_Alanine_Serine_Interconversions	Serine transporter	fig|6666666.229926.peg.1719
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229926.peg.1738
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229926.peg.1739
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	fig|6666666.229926.peg.902
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase beta chain (EC 4.1.1.3)	fig|6666666.229926.peg.903
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)	fig|6666666.229926.peg.901
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229926.peg.2119
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229926.peg.912
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetaldehyde dehydrogenase (EC 1.2.1.10)	fig|6666666.229926.peg.1339
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229926.peg.737
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.229926.peg.611
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)	fig|6666666.229926.peg.746
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	fig|6666666.229926.peg.747
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229926.peg.189
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229926.peg.736
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Pyruvate dehydrogenase E1 component (EC 1.2.4.1)	fig|6666666.229926.peg.745
Queuosine-Archaeosine_Biosynthesis	Dihydroneopterin triphosphate pyrophosphohydolase type 2	fig|6666666.229926.peg.1284
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229926.peg.1819
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8)	fig|6666666.229926.peg.1604
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229926.peg.806
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229926.peg.1086
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229926.peg.1794
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229926.peg.1958
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229926.peg.1959
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229926.peg.2129
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.229926.peg.1176
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.229926.peg.1881
Queuosine-Archaeosine_Biosynthesis	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229926.peg.1882
Queuosine-Archaeosine_Biosynthesis	Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	fig|6666666.229926.peg.1069
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229926.peg.1365
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229926.peg.1368
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229926.peg.1654
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229926.peg.1970
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)	fig|6666666.229926.peg.2041
RNA_methylation	23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-)	fig|6666666.229926.peg.1786
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)	fig|6666666.229926.peg.1172
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229926.peg.281
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229926.peg.1595
RNA_methylation	LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM	fig|6666666.229926.peg.1003
RNA_methylation	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229926.peg.969
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229926.peg.1715
RNA_methylation	Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52)	fig|6666666.229926.peg.1314
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229926.peg.2080
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229926.peg.59
RNA_methylation	hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]	fig|6666666.229926.peg.1525
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229926.peg.1483
RNA_methylation	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229926.peg.2157
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229926.peg.287
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.229926.peg.1260
RNA_methylation	tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)	fig|6666666.229926.peg.2009
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229926.peg.2056
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229926.peg.2074
RNA_methylation	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229926.peg.169
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229926.peg.310
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229926.peg.1997
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229926.peg.1774
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229926.peg.1483
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229926.peg.1480
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229926.peg.1774
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229926.peg.1772
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229926.peg.1769
RNA_modification_cluster	Protein YidD	fig|6666666.229926.peg.1771
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229926.peg.1770
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229926.peg.512
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229926.peg.1528
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229926.peg.1527
RNA_polymerase_bacterial	DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)	fig|6666666.229926.peg.456
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.229926.peg.282
RNA_processing_and_degradation,_bacterial	3'-to-5' oligoribonuclease (orn)	fig|6666666.229926.peg.329
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229926.peg.187
RNA_processing_and_degradation,_bacterial	Exoribonuclease II (EC 3.1.13.1)	fig|6666666.229926.peg.1877
RNA_processing_and_degradation,_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.229926.peg.1943
RNA_processing_and_degradation,_bacterial	Ribonuclease E inhibitor RraA	fig|6666666.229926.peg.1684
RNA_processing_and_degradation,_bacterial	Ribonuclease E inhibitor RraB	fig|6666666.229926.peg.465
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229926.peg.1776
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.805
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.1257
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229926.peg.752
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229926.peg.1941
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229926.peg.296
RNA_pseudouridine_syntheses	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.1740
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.943
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.1436
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229926.peg.706
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229926.peg.956
Rcs_phosphorelay_signal_transduction_pathway	DnaJ-like protein DjlA	fig|6666666.229926.peg.2050
RecA_and_RecX	RecA protein	fig|6666666.229926.peg.240
RecA_and_RecX	Regulatory protein RecX	fig|6666666.229926.peg.241
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229926.peg.1421
Recycling_of_Peptidoglycan_Amino_Acids	AmpG permease	fig|6666666.229926.peg.688
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229926.peg.322
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD	fig|6666666.229926.peg.1676
Recycling_of_Peptidoglycan_Amino_Acids	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)	fig|6666666.229926.peg.1928
Recycling_of_Peptidoglycan_Amino_Sugars	Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-)	fig|6666666.229926.peg.1452
Recycling_of_Peptidoglycan_Amino_Sugars	Beta N-acetyl-glucosaminidase (EC 3.2.1.52)	fig|6666666.229926.peg.1787
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229926.peg.647
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229926.peg.1431
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229926.peg.667
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229926.peg.669
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229926.peg.773
Respiratory_dehydrogenases_1	L-lactate dehydrogenase (EC 1.1.2.3)	fig|6666666.229926.peg.1375
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229926.peg.774
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229926.peg.365
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229926.peg.368
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229926.peg.933
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.369
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.370
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.371
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.1499
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.1500
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.1501
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.1691
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.362
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.363
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.364
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.1495
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.1496
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.1497
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.1688
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.1689
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229926.peg.62
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229926.peg.367
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229926.peg.1498
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229926.peg.1690
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229926.peg.624
Rhamnose_containing_glycans	DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase	fig|6666666.229926.peg.542
Rhamnose_containing_glycans	DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase	fig|6666666.229926.peg.557
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229926.peg.548
Rhamnose_containing_glycans	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229926.peg.552
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229926.peg.690
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229926.peg.550
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.229926.peg.549
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229926.peg.547
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229926.peg.558
Riboflavin,_FMN_and_FAD_metabolism	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229926.peg.1973
Riboflavin,_FMN_and_FAD_metabolism	5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase	fig|6666666.229926.peg.1129
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229926.peg.1000
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229926.peg.352
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229926.peg.1000
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229926.peg.1917
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229926.peg.560
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229926.peg.1917
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229926.peg.1826
Riboflavin,_FMN_and_FAD_metabolism_in_plants	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229926.peg.1973
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase	fig|6666666.229926.peg.1129
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229926.peg.1000
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229926.peg.352
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229926.peg.1000
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229926.peg.1285
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229926.peg.1917
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229926.peg.560
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229926.peg.1827
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229926.peg.1917
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229926.peg.1826
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229926.peg.2157
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229926.peg.706
Riboflavin_synthesis_cluster	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229926.peg.1973
Riboflavin_synthesis_cluster	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229926.peg.1000
Riboflavin_synthesis_cluster	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229926.peg.352
Riboflavin_synthesis_cluster	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.229926.peg.1106
Riboflavin_synthesis_cluster	ATP phosphoribosyltransferase (EC 2.4.2.17)	fig|6666666.229926.peg.1107
Riboflavin_synthesis_cluster	Diacylglycerol kinase (EC 2.7.1.107)	fig|6666666.229926.peg.2039
Riboflavin_synthesis_cluster	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229926.peg.1000
Riboflavin_synthesis_cluster	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229926.peg.560
Riboflavin_synthesis_cluster	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229926.peg.774
Riboflavin_synthesis_cluster	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229926.peg.644
Riboflavin_synthesis_cluster	Phosphatidylglycerophosphatase A (EC 3.1.3.27)	fig|6666666.229926.peg.355
Riboflavin_synthesis_cluster	Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)	fig|6666666.229926.peg.1116
Riboflavin_synthesis_cluster	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229926.peg.1826
Riboflavin_synthesis_cluster	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229926.peg.251
Riboflavin_synthesis_cluster	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229926.peg.354
Riboflavin_synthesis_cluster	Transcription termination protein NusB	fig|6666666.229926.peg.353
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229926.peg.1346
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229926.peg.146
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229926.peg.146
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229926.peg.76
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229926.peg.1608
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229926.peg.1611
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229926.peg.361
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229926.peg.910
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229926.peg.360
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229926.peg.911
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.229926.peg.1001
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229926.peg.470
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229926.peg.114
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229926.peg.505
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.229926.peg.1530
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.229926.peg.1532
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.229926.peg.945
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.229926.peg.498
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.229926.peg.506
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.229926.peg.494
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.229926.peg.513
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.229926.peg.504
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.229926.peg.286
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229926.peg.1531
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.229926.peg.783
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.229926.peg.1961
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.229926.peg.492
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.229926.peg.489
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.229926.peg.499
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.229926.peg.824
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.229926.peg.1960
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.229926.peg.96
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.229926.peg.495
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.229926.peg.490
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.229926.peg.102
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.229926.peg.1947
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-dependent	fig|6666666.229926.peg.102
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-independent	fig|6666666.229926.peg.1947
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.229926.peg.1584
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.229926.peg.97
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.229926.peg.97
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.229926.peg.1769
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.229926.peg.508
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.229926.peg.487
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.229926.peg.488
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.229926.peg.500
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.229926.peg.503
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229926.peg.1529
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.229926.peg.274
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.229926.peg.486
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.229926.peg.510
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.229926.peg.114
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.229926.peg.509
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.229926.peg.501
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.229926.peg.501
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.229926.peg.1722
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.229926.peg.289
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.229926.peg.496
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.229926.peg.273
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-independent	fig|6666666.229926.peg.273
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.229926.peg.491
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.229926.peg.640
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.229926.peg.1919
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.229926.peg.1093
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.229926.peg.2044
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.229926.peg.493
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.229926.peg.511
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.229926.peg.505
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.229926.peg.271
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.229926.peg.113
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.229926.peg.502
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.229926.peg.944
Ribosome_activity_modulation	Ribosome hibernation protein YfiA	fig|6666666.229926.peg.1667
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229926.peg.288
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229926.peg.1595
Ribosome_biogenesis_bacterial	Ribonuclease E (EC 3.1.26.12)	fig|6666666.229926.peg.1943
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.805
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.1257
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229926.peg.1941
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229926.peg.296
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.229926.peg.1663
Ribosome_biogenesis_bacterial	Ribosomal protein S6 glutaminyl transferase	fig|6666666.229926.peg.1857
Ribosome_biogenesis_bacterial	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229926.peg.1312
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229926.peg.59
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229926.peg.575
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229926.peg.287
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229926.peg.134
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229926.peg.2044
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229926.peg.2043
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229926.peg.132
Rrf2_family_transcriptional_regulators	Iron-sulfur cluster regulator IscR	fig|6666666.229926.peg.168
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.229926.peg.1287
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229926.peg.1285
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229926.peg.1288
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229926.peg.1289
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	HflC protein	fig|6666666.229926.peg.405
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	HflK protein	fig|6666666.229926.peg.406
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229926.peg.160
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229926.peg.1365
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like	fig|6666666.229926.peg.159
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229926.peg.323
Scaffold_proteins_for_[4Fe-4S]_cluster_assembly_(MRP_family)	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229926.peg.1368
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.229926.peg.1440
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229926.peg.718
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.229926.peg.1439
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229926.peg.1413
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229926.peg.1415
Septum_site-determining_cluster_Min	Septum site-determining protein MinC	fig|6666666.229926.peg.210
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229926.peg.1071
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229926.peg.1372
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229926.peg.1921
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229926.peg.1921
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229926.peg.1317
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229926.peg.1062
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229926.peg.336
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229926.peg.1954
Sialic_Acid_Metabolism	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229926.peg.2112
Sialic_Acid_Metabolism	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229926.peg.1451
Sialic_Acid_Metabolism	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229926.peg.1059
Sialic_Acid_Metabolism	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229926.peg.1451
Sialic_Acid_Metabolism	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.229926.peg.1060
Sialic_Acid_Metabolism	N-acetylmannosamine kinase (EC 2.7.1.60)	fig|6666666.229926.peg.1056
Sialic_Acid_Metabolism	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)	fig|6666666.229926.peg.1055
Sialic_Acid_Metabolism	N-acetylneuraminate lyase (EC 4.1.3.3)	fig|6666666.229926.peg.1058
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229926.peg.681
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)	fig|6666666.229926.peg.1051
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229926.peg.681
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69)	fig|6666666.229926.peg.1051
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229926.peg.681
Sialic_Acid_Metabolism	PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)	fig|6666666.229926.peg.1051
Sialic_Acid_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229926.peg.1504
Sialic_Acid_Metabolism	PTS system, mannose-specific IIB component (EC 2.7.1.69)	fig|6666666.229926.peg.1969
Sialic_Acid_Metabolism	PTS system, mannose-specific IIC component (EC 2.7.1.69)	fig|6666666.229926.peg.1968
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229926.peg.213
Sialic_Acid_Metabolism	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229926.peg.1987
Sialic_Acid_Metabolism	Putative sugar isomerase involved in processing of exogenous sialic acid	fig|6666666.229926.peg.1677
Sialic_Acid_Metabolism	Sialic acid utilization regulator, RpiR family	fig|6666666.229926.peg.1057
Sialic_Acid_Metabolism	Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase	fig|6666666.229926.peg.1052
Sialic_Acid_Metabolism	TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter	fig|6666666.229926.peg.1053
Sialic_Acid_Metabolism	TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein	fig|6666666.229926.peg.1054
Sialic_Acid_Metabolism	TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter	fig|6666666.229926.peg.1053
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229926.peg.1062
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229926.peg.1777
Single-Rhodanese-domain_proteins	Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1)	fig|6666666.229926.peg.125
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome C553 (soluble cytochrome f)	fig|6666666.229926.peg.1884
Soluble_cytochromes_and_functionally_related_electron_carriers	Cytochrome c552 precursor (EC 1.7.2.2)	fig|6666666.229926.peg.1753
Soluble_cytochromes_and_functionally_related_electron_carriers	Ferredoxin	fig|6666666.229926.peg.359
Soluble_cytochromes_and_functionally_related_electron_carriers	Ferredoxin, 2Fe-2S	fig|6666666.229926.peg.162
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229926.peg.1105
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.229926.peg.697
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229926.peg.2031
Staphylococcal_pathogenicity_islands_SaPI	Methionine ABC transporter substrate-binding protein	fig|6666666.229926.peg.2011
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229926.peg.273
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229926.peg.1955
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229926.peg.254
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229926.peg.253
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.229926.peg.256
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229926.peg.252
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229926.peg.1200
Stationary_phase_repair_cluster	FIG139438: lipoprotein B	fig|6666666.229926.peg.257
Stationary_phase_repair_cluster	Lipoprotein NlpD	fig|6666666.229926.peg.259
Stationary_phase_repair_cluster	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229926.peg.255
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.229926.peg.2040
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II	fig|6666666.229926.peg.457
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.229926.peg.457
Succinate_dehydrogenase	Fumarate reductase subunit C	fig|6666666.229926.peg.1170
Succinate_dehydrogenase	Fumarate reductase subunit D	fig|6666666.229926.peg.1171
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229926.peg.1168
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229926.peg.1169
Sucrose_utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.229926.peg.710
Sulfate_reduction-associated_complexes	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229926.peg.616
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-)	fig|6666666.229926.peg.616
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229926.peg.1459
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229926.peg.1460
Sulfite_reduction-associated_complex_DsrMKJOP_and_co-clustering_genes	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229926.peg.1461
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229926.peg.298
TCA_Cycle	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	fig|6666666.229926.peg.1408
TCA_Cycle	Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	fig|6666666.229926.peg.228
TCA_Cycle	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229926.peg.747
TCA_Cycle	Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	fig|6666666.229926.peg.747
TCA_Cycle	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	fig|6666666.229926.peg.1409
TCA_Cycle	Fumarate hydratase class II (EC 4.2.1.2)	fig|6666666.229926.peg.1860
TCA_Cycle	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229926.peg.1007
TCA_Cycle	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229926.peg.1168
TCA_Cycle	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229926.peg.1169
TCA_Cycle	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	fig|6666666.229926.peg.1412
TCA_Cycle	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	fig|6666666.229926.peg.1411
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, large permease component	fig|6666666.229926.peg.1080
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, periplasmic component	fig|6666666.229926.peg.1079
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229926.peg.253
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229926.peg.552
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid translocation permease protein TagG	fig|6666666.229926.peg.551
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229926.peg.1898
Tellurite_resistance:_Chromosomal_determinants	Tellurite resistance protein TehB	fig|6666666.229926.peg.744
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.229926.peg.1291
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229926.peg.1292
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229926.peg.568
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229926.peg.569
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229926.peg.1469
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.229926.peg.1291
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229926.peg.1292
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229926.peg.568
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229926.peg.569
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229926.peg.1469
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229926.peg.112
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229926.peg.112
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229926.peg.793
Thiamin_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229926.peg.167
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229926.peg.964
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229926.peg.1046
Thiamin_biosynthesis	Thiamin ABC transporter, substrate-binding component	fig|6666666.229926.peg.1044
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229926.peg.1045
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229926.peg.354
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.229926.peg.1466
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229926.peg.419
Thioredoxin-disulfide_reductase	Thiol peroxidase, Tpx-type (EC 1.11.1.15)	fig|6666666.229926.peg.1900
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229926.peg.570
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229926.peg.737
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229926.peg.736
Threonine_anaerobic_catabolism_gene_cluster	Serine transporter	fig|6666666.229926.peg.1719
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.846
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.1726
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.2017
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229926.peg.2027
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229926.peg.1120
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229926.peg.1831
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.229926.peg.411
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.229926.peg.411
Threonine_and_Homoserine_Biosynthesis	Homoserine kinase (EC 2.7.1.39)	fig|6666666.229926.peg.410
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229926.peg.408
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.229926.peg.1294
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.229926.peg.42
Ton_and_Tol_transport_systems	Ferric siderophore transport system, biopolymer transport protein ExbB	fig|6666666.229926.peg.43
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229926.peg.41
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.229926.peg.1295
Ton_and_Tol_transport_systems	Peptidoglycan-associated lipoprotein precursor	fig|6666666.229926.peg.1299
Ton_and_Tol_transport_systems	Tol biopolymer transport system, TolR protein	fig|6666666.229926.peg.1296
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229926.peg.1297
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229926.peg.863
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229926.peg.869
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229926.peg.870
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229926.peg.871
Ton_and_Tol_transport_systems	tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins	fig|6666666.229926.peg.1298
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229926.peg.699
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229926.peg.814
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229926.peg.889
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229926.peg.1036
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229926.peg.813
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229926.peg.888
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229926.peg.1037
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229926.peg.941
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229926.peg.1348
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229926.peg.698
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229926.peg.538
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229926.peg.537
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229926.peg.702
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229926.peg.2134
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229926.peg.2135
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229926.peg.2140
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229926.peg.1533
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229926.peg.1822
Transcription_factors_bacterial	Transcription elongation factor GreB	fig|6666666.229926.peg.2133
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229926.peg.1592
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229926.peg.703
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229926.peg.353
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229926.peg.1209
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229926.peg.1091
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoE	fig|6666666.229926.peg.1446
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoH	fig|6666666.229926.peg.1228
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE negative regulatory protein RseA	fig|6666666.229926.peg.1447
Transcription_initiation,_bacterial_sigma_factors	Sigma factor RpoE negative regulatory protein RseB precursor	fig|6666666.229926.peg.1448
Transcription_repair_cluster	Arsenate reductase (EC 1.20.4.1)	fig|6666666.229926.peg.474
Transcription_repair_cluster	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229926.peg.1451
Transcription_repair_cluster	LSU ribosomal protein L25p	fig|6666666.229926.peg.824
Transcription_repair_cluster	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229926.peg.1451
Transcription_repair_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229926.peg.1105
Transcription_repair_cluster	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229926.peg.1377
Transcription_repair_cluster	Transcription-repair coupling factor	fig|6666666.229926.peg.1209
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229926.peg.112
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.229926.peg.1802
Translation_elongation_factor_P_lysylation	Translation elongation factor P Lys34:lysine transferase	fig|6666666.229926.peg.1167
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229926.peg.112
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.229926.peg.1778
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.229926.peg.1802
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.229926.peg.2043
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229926.peg.1515
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229926.peg.461
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229926.peg.705
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229926.peg.153
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229926.peg.704
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229926.peg.781
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.229926.peg.645
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229926.peg.1895
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229926.peg.205
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229926.peg.973
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.229926.peg.1035
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229926.peg.2014
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229926.peg.1105
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229926.peg.206
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229926.peg.134
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229926.peg.1955
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229926.peg.983
Transport_of_Nickel_and_Cobalt	Additional component NikL of nickel ECF transporter	fig|6666666.229926.peg.980
Transport_of_Nickel_and_Cobalt	Additional periplasmic component NikK of nickel ECF transporter	fig|6666666.229926.peg.979
Transport_of_Nickel_and_Cobalt	Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)	fig|6666666.229926.peg.1982
Transport_of_Nickel_and_Cobalt	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229926.peg.981
Transport_of_Nickel_and_Cobalt	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229926.peg.982
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229926.peg.817
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229926.peg.818
Trehalose_Uptake_and_Utilization	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)	fig|6666666.229926.peg.1151
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229926.peg.1553
Triacylglycerol_metabolism	Lysophospholipase L2 (EC 3.1.1.5)	fig|6666666.229926.peg.1518
Triacylglycerol_metabolism	Putative lipase in cluster with Phosphatidate cytidylyltransferase	fig|6666666.229926.peg.1577
Triacylglycerol_metabolism	Putative lipase in cluster with Phosphatidate cytidylyltransferase	fig|6666666.229926.peg.1578
Tryptophan_synthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229926.peg.337
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229926.peg.886
Tryptophan_synthesis	Anthranilate phosphoribosyltransferase (EC 2.4.2.18)	fig|6666666.229926.peg.887
Tryptophan_synthesis	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.229926.peg.884
Tryptophan_synthesis	Anthranilate synthase, aminase component (EC 4.1.3.27)	fig|6666666.229926.peg.883
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229926.peg.890
Tryptophan_synthesis	Indole-3-glycerol phosphate synthase (EC 4.1.1.48)	fig|6666666.229926.peg.891
Tryptophan_synthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229926.peg.339
Tryptophan_synthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229926.peg.338
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229926.peg.890
Tryptophan_synthesis	Phosphoribosylanthranilate isomerase (EC 5.3.1.24)	fig|6666666.229926.peg.891
Tryptophan_synthesis	Transcriptional repressor protein TrpR	fig|6666666.229926.peg.1157
Tryptophan_synthesis	Tryptophan synthase alpha chain (EC 4.2.1.20)	fig|6666666.229926.peg.909
Tryptophan_synthesis	Tryptophan synthase beta chain (EC 4.2.1.20)	fig|6666666.229926.peg.908
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.229926.peg.17
Twin-arginine_translocation_system	Twin-arginine translocation protein TatB	fig|6666666.229926.peg.18
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.229926.peg.19
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.229926.peg.1203
Type_IV_pilus	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229926.peg.80
Type_IV_pilus	Leader peptidase (Prepilin peptidase) (EC 3.4.23.43)	fig|6666666.229926.peg.1672
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229926.peg.87
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229926.peg.1845
Type_IV_pilus	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229926.peg.1892
Type_IV_pilus	N-methyltransferase (EC 2.1.1.-)	fig|6666666.229926.peg.1672
Type_IV_pilus	Type IV fimbrial assembly protein PilC	fig|6666666.229926.peg.1673
Type_IV_pilus	Type IV fimbrial assembly, ATPase PilB	fig|6666666.229926.peg.1674
Type_IV_pilus	Type IV pilin PilA	fig|6666666.229926.peg.1675
Type_IV_pilus	Type IV pilus biogenesis protein PilM	fig|6666666.229926.peg.86
Type_IV_pilus	Type IV pilus biogenesis protein PilN	fig|6666666.229926.peg.85
Type_IV_pilus	Type IV pilus biogenesis protein PilQ	fig|6666666.229926.peg.82
Type_IV_pilus	Type IV pilus biogenesis protein PilQ	fig|6666666.229926.peg.83
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.369
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.370
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.371
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.1499
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.1500
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.1501
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229926.peg.1691
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.362
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.363
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.364
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.1495
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.1496
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.1497
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.1688
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229926.peg.1689
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229926.peg.62
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229926.peg.367
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229926.peg.1498
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229926.peg.1690
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	fig|6666666.229926.peg.2112
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)	fig|6666666.229926.peg.1451
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23)	fig|6666666.229926.peg.1451
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229926.peg.213
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229926.peg.1987
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229926.peg.1230
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229926.peg.429
USS-DB-7	ClpB protein	fig|6666666.229926.peg.77
USS-DB-7	ClpB protein	fig|6666666.229926.peg.1122
USS-DB-7	ClpB protein	fig|6666666.229926.peg.1123
USS-DB-7	VgrG protein	fig|6666666.229926.peg.2000
Ubiquinone_Biosynthesis	Chorismate--pyruvate lyase (EC 4.1.3.40)	fig|6666666.229926.peg.459
Ubiquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229926.peg.1765
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229926.peg.1104
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229926.peg.180
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229926.peg.2006
Universal_GTPases	GTP-binding protein Era	fig|6666666.229926.peg.1775
Universal_GTPases	GTP-binding protein HflX	fig|6666666.229926.peg.318
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229926.peg.1957
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.229926.peg.421
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229926.peg.1774
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229926.peg.330
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229926.peg.420
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229926.peg.1971
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229926.peg.46
Universal_GTPases	Translation elongation factor G	fig|6666666.229926.peg.112
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229926.peg.1778
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229926.peg.1515
Universal_GTPases	Translation initiation factor 2	fig|6666666.229926.peg.704
Universal_stress_protein_family	Universal stress protein A	fig|6666666.229926.peg.2086
Universal_stress_protein_family	Universal stress protein E	fig|6666666.229926.peg.838
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229926.peg.766
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.229926.peg.1387
Uptake_of_selenate_and_selenite	DedA protein	fig|6666666.229926.peg.823
Uptake_of_selenate_and_selenite	Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)	fig|6666666.229926.peg.375
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.229926.peg.1781
Utilization_of_glutathione_as_a_sulphur_source	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229926.peg.1030
VC0266	Hypothetical protein VC0266 (sugar utilization related?)	fig|6666666.229926.peg.1103
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229926.peg.1005
Widespread_colonization_island	Flp pilus assembly membrane protein TadE	fig|6666666.229926.peg.1223
Widespread_colonization_island	Flp pilus assembly protein RcpB	fig|6666666.229926.peg.1217
Widespread_colonization_island	Flp pilus assembly protein RcpC/CpaB	fig|6666666.229926.peg.1215
Widespread_colonization_island	Flp pilus assembly protein TadB	fig|6666666.229926.peg.1220
Widespread_colonization_island	Flp pilus assembly protein TadD, contains TPR repeat	fig|6666666.229926.peg.1222
Widespread_colonization_island	Protein TadG, associated with Flp pilus assembly	fig|6666666.229926.peg.1224
Widespread_colonization_island	Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily	fig|6666666.229926.peg.1219
Widespread_colonization_island	Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly	fig|6666666.229926.peg.1218
Widespread_colonization_island	Type II/IV secretion system protein TadC, associated with Flp pilus assembly	fig|6666666.229926.peg.1221
Widespread_colonization_island	Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly	fig|6666666.229926.peg.1216
Widespread_colonization_island	Type IV prepilin peptidase TadV/CpaA	fig|6666666.229926.peg.1214
Xylose_utilization	D-xylose transport ATP-binding protein XylG	fig|6666666.229926.peg.2024
Xylose_utilization	D-xylose transport ATP-binding protein XylG	fig|6666666.229926.peg.2025
Xylose_utilization	Xylose ABC transporter, periplasmic xylose-binding protein XylF	fig|6666666.229926.peg.2023
Xylose_utilization	Xylose ABC transporter, permease protein XylH	fig|6666666.229926.peg.2026
Xylose_utilization	Xylose isomerase (EC 5.3.1.5)	fig|6666666.229926.peg.2022
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229926.peg.2021
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229926.peg.1566
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.229926.peg.1607
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229926.peg.575
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229926.peg.1095
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229926.peg.575
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229926.peg.323
YrdC-YciO-Sua5_protein_family	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229926.peg.842
YrdC-YciO-Sua5_protein_family	Hypothetical YciO protein, TsaC/YrdC paralog	fig|6666666.229926.peg.751
YrdC-YciO-Sua5_protein_family	Peptide chain release factor 1	fig|6666666.229926.peg.205
YrdC-YciO-Sua5_protein_family	Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p	fig|6666666.229926.peg.605
YrdC-YciO-Sua5_protein_family	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229926.peg.206
YrdC-YciO-Sua5_protein_family	Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	fig|6666666.229926.peg.1312
YrdC-YciO-Sua5_protein_family	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229926.peg.275
YrdC-YciO-Sua5_protein_family	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229926.peg.276
YrdC-YciO-Sua5_protein_family	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229926.peg.1317
YrdC-YciO-Sua5_protein_family	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229926.peg.575
YrdC-YciO-Sua5_protein_family	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229926.peg.1095
YrdC-YciO-Sua5_protein_family	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229926.peg.323
Zinc_regulated_enzymes	C4-type zinc finger protein, DksA/TraR family	fig|6666666.229926.peg.731
Zinc_regulated_enzymes	Carbonic anhydrase (EC 4.2.1.1)	fig|6666666.229926.peg.767
Zinc_regulated_enzymes	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229926.peg.1603
Zinc_regulated_enzymes	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229926.peg.1819
Zinc_regulated_enzymes	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229926.peg.322
Zinc_regulated_enzymes	Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)	fig|6666666.229926.peg.1116
Zinc_regulated_enzymes	Porphobilinogen synthase (EC 4.2.1.24)	fig|6666666.229926.peg.20
Zinc_regulated_enzymes	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229926.peg.1882
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaA	fig|6666666.229926.peg.931
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaC	fig|6666666.229926.peg.930
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaD	fig|6666666.229926.peg.929
ar-104-EC_Molybdenum_cofactor_biosynthesis_moaABCDE	Molybdenum cofactor biosynthesis protein MoaE	fig|6666666.229926.peg.928
ar-431-EC_Molybdopterin-guanine_dinucleotide_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobA	fig|6666666.229926.peg.1544
ar-431-EC_Molybdopterin-guanine_dinucleotide_biosynthesis	Molybdopterin-guanine dinucleotide biosynthesis protein MobB	fig|6666666.229926.peg.1419
cAMP_signaling_in_bacteria	3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)	fig|6666666.229926.peg.1180
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229926.peg.1699
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229926.peg.658
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229926.peg.1384
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229926.peg.2124
cAMP_signaling_in_bacteria	Cyclic AMP receptor protein	fig|6666666.229926.peg.90
cAMP_signaling_in_bacteria	bifunctional hemolysin-adenylate cyclase precursor	fig|6666666.229926.peg.1319
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229926.peg.1189
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229926.peg.1190
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229926.peg.1194
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229926.peg.1188
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229926.peg.1191
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229926.peg.1192
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229926.peg.1189
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229926.peg.1190
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229926.peg.1188
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229926.peg.1193
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229926.peg.548
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229926.peg.550
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.229926.peg.549
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229926.peg.547
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229926.peg.558
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229926.peg.167
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA	fig|6666666.229926.peg.591
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229926.peg.1774
mnm5U34_biosynthesis_bacteria	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229926.peg.2157
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusA	fig|6666666.229926.peg.1511
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229926.peg.1459
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229926.peg.1460
mnm5U34_biosynthesis_bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229926.peg.1461
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229926.peg.1480
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229926.peg.577
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229926.peg.578
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229926.peg.1615
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229926.peg.1025
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229926.peg.1244
pyrimidine_conversions	Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)	fig|6666666.229926.peg.1789
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.229926.peg.1916
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229926.peg.1393
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229926.peg.639
pyrimidine_conversions	Cytosine deaminase (EC 3.5.4.1)	fig|6666666.229926.peg.2088
pyrimidine_conversions	Deoxycytidine triphosphate deaminase (EC 3.5.4.13)	fig|6666666.229926.peg.177
pyrimidine_conversions	Nucleoside diphosphate kinase (EC 2.7.4.6)	fig|6666666.229926.peg.156
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229926.peg.1272
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229926.peg.570
pyrimidine_conversions	Thymidine kinase (EC 2.7.1.21)	fig|6666666.229926.peg.1097
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229926.peg.1564
pyrimidine_conversions	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.229926.peg.1643
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229926.peg.57
pyrimidine_conversions	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229926.peg.1705
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48) [C1]	fig|6666666.229926.peg.176
pyrimidine_conversions	Uridine phosphorylase (EC 2.4.2.3)	fig|6666666.229926.peg.477
riboflavin_to_FAD	3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	fig|6666666.229926.peg.1973
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229926.peg.1917
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229926.peg.1917
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229926.peg.1826
tRNA-methylthiotransferase_containing_cluster	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229926.peg.152
tRNA-methylthiotransferase_containing_cluster	Copper homeostasis protein CutE	fig|6666666.229926.peg.152
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.44
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.231
tRNA-methylthiotransferase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229926.peg.1569
tRNA-methylthiotransferase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229926.peg.1213
tRNA-methylthiotransferase_containing_cluster	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229926.peg.1964
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229926.peg.2085
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229926.peg.202
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229926.peg.924
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229926.peg.1281
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229926.peg.1603
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.229926.peg.812
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229926.peg.1626
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)	fig|6666666.229926.peg.27
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)	fig|6666666.229926.peg.21
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229926.peg.1711
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229926.peg.1063
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229926.peg.64
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.229926.peg.1883
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229926.peg.160
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229926.peg.877
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229926.peg.876
tRNA_aminoacylation,_Pro	Cys-tRNA(Pro) deacylase YbaK	fig|6666666.229926.peg.1830
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.229926.peg.1442
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229926.peg.1392
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229926.peg.779
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229926.peg.1972
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229926.peg.711
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229926.peg.1866
tRNA_modification_Bacteria	Believed to be involved in assembly of Fe-S clusters	fig|6666666.229926.peg.161
tRNA_modification_Bacteria	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229926.peg.842
tRNA_modification_Bacteria	COG1720: Uncharacterized conserved protein	fig|6666666.229926.peg.1687
tRNA_modification_Bacteria	Chaperone protein HscA	fig|6666666.229926.peg.163
tRNA_modification_Bacteria	Chaperone protein HscB	fig|6666666.229926.peg.164
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	fig|6666666.229926.peg.167
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229926.peg.1393
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229926.peg.1563
tRNA_modification_Bacteria	Ferredoxin, 2Fe-2S	fig|6666666.229926.peg.162
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229926.peg.1819
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229926.peg.1774
tRNA_modification_Bacteria	Iron binding protein IscA for iron-sulfur cluster assembly	fig|6666666.229926.peg.165
tRNA_modification_Bacteria	Iron-sulfur cluster assembly scaffold protein IscU	fig|6666666.229926.peg.166
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229926.peg.1595
tRNA_modification_Bacteria	Predicted P-loop ATPase fused to an acetyltransferase COG1444	fig|6666666.229926.peg.1211
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.229926.peg.1176
tRNA_modification_Bacteria	Queuosine Biosynthesis QueE Radical SAM	fig|6666666.229926.peg.1881
tRNA_modification_Bacteria	Queuosine biosynthesis QueD, PTPS-I	fig|6666666.229926.peg.1882
tRNA_modification_Bacteria	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.805
tRNA_modification_Bacteria	Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.1257
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229926.peg.1365
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229926.peg.718
tRNA_modification_Bacteria	hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]	fig|6666666.229926.peg.1525
tRNA_modification_Bacteria	tRNA (5-methoxyuridine) 34 synthase	fig|6666666.229926.peg.185
tRNA_modification_Bacteria	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229926.peg.2157
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229926.peg.287
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229926.peg.2056
tRNA_modification_Bacteria	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	fig|6666666.229926.peg.1279
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusA	fig|6666666.229926.peg.1511
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	fig|6666666.229926.peg.1459
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusC	fig|6666666.229926.peg.1460
tRNA_modification_Bacteria	tRNA 5-methylaminomethyl-2-thiouridine synthase TusD	fig|6666666.229926.peg.1461
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229926.peg.1664
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229926.peg.320
tRNA_modification_Bacteria	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229926.peg.255
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.943
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.1436
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229926.peg.706
tRNA_modification_Bacteria	tRNA pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229926.peg.956
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229926.peg.1480
tRNA_modification_Bacteria	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229926.peg.873
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229926.peg.693
tRNA_modification_Bacteria	tRNA-dihydrouridine synthase C (EC 1.-.-.-)	fig|6666666.229926.peg.2051
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229926.peg.1368
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229926.peg.1964
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229926.peg.1644
tRNA_modification_Bacteria	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229926.peg.169
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229926.peg.1380
tRNA_processing	Ribonuclease D (EC 3.1.26.3)	fig|6666666.229926.peg.579
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229926.peg.1770
tRNA_processing	Ribonuclease PH (EC 2.7.7.56)	fig|6666666.229926.peg.2048
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229926.peg.320
tRNA_processing	tRNA pseudouridine 13 synthase (EC 4.2.1.-)	fig|6666666.229926.peg.255
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.943
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229926.peg.1436
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229926.peg.706
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229926.peg.693
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229926.peg.1964
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229926.peg.1644
tRNAmodification_position_34	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229926.peg.1774
tRNAmodification_position_34	Predicted P-loop ATPase fused to an acetyltransferase COG1444	fig|6666666.229926.peg.1211
tRNAmodification_position_34	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229926.peg.1365
tRNAmodification_position_34	tRNA (5-methoxyuridine) 34 synthase	fig|6666666.229926.peg.185
tRNAmodification_position_34	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)	fig|6666666.229926.peg.2157
tRNAmodification_position_34	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	fig|6666666.229926.peg.1279
tRNAmodification_position_34	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229926.peg.1480
tRNAmodification_position_34	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229926.peg.693
tRNAmodification_position_34	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229926.peg.1368
tRNAmodification_position_34	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229926.peg.1644
tRNAs	tRNA-Ala-GGC	fig|6666666.229926.rna.38
tRNAs	tRNA-Arg-ACG	fig|6666666.229926.rna.20
tRNAs	tRNA-Arg-ACG	fig|6666666.229926.rna.21
tRNAs	tRNA-Arg-CCG	fig|6666666.229926.rna.39
tRNAs	tRNA-Cys-GCA	fig|6666666.229926.rna.43
tRNAs	tRNA-Gly-GCC	fig|6666666.229926.rna.3
tRNAs	tRNA-Gly-GCC	fig|6666666.229926.rna.5
tRNAs	tRNA-Gly-GCC	fig|6666666.229926.rna.44
tRNAs	tRNA-Leu-CAA	fig|6666666.229926.rna.6
tRNAs	tRNA-Leu-CAG	fig|6666666.229926.rna.4
tRNAs	tRNA-Leu-GAG	fig|6666666.229926.rna.17
tRNAs	tRNA-Phe-GAA	fig|6666666.229926.rna.49
tRNAs	tRNA-Ser-GGA	fig|6666666.229926.rna.14
tRNAs	tRNA-Trp-CCA	fig|6666666.229926.rna.15
tRNAs	tRNA-Val-GAC	fig|6666666.229926.rna.13
