16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229869.peg.458
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229869.peg.624
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.229869.peg.626
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229869.peg.423
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229869.peg.625
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229869.peg.1568
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229869.peg.1827
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229869.peg.780
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229869.peg.1693
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229869.peg.1717
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229869.peg.164
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229869.peg.1749
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229869.peg.1721
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229869.peg.1460
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229869.peg.1755
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229869.peg.2593
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229869.peg.2592
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229869.peg.1874
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)	fig|6666666.229869.peg.844
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)	fig|6666666.229869.peg.846
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1)	fig|6666666.229869.peg.845
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.229869.peg.419
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)	fig|6666666.229869.peg.2169
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)	fig|6666666.229869.peg.1552
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)	fig|6666666.229869.peg.2167
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)	fig|6666666.229869.peg.2166
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)	fig|6666666.229869.peg.2165
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)	fig|6666666.229869.peg.2164
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229869.peg.17
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229869.peg.1908
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)	fig|6666666.229869.peg.705
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229869.peg.19
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229869.peg.1910
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229869.peg.41
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229869.peg.506
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229869.peg.785
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229869.peg.791
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.229869.peg.2107
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.34
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.39
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.507
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.710
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.1795
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.1911
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.2451
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229869.peg.508
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229869.peg.713
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229869.peg.789
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229869.peg.1226
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229869.peg.16
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229869.peg.38
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229869.peg.43
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229869.peg.509
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229869.peg.714
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229869.peg.788
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229869.peg.1001
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229869.peg.1227
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229869.peg.2106
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229869.peg.35
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229869.peg.37
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229869.peg.40
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229869.peg.42
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229869.peg.505
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229869.peg.708
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229869.peg.711
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229869.peg.786
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229869.peg.792
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229869.peg.1224
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229869.peg.2104
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229869.peg.36
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229869.peg.712
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229869.peg.1225
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229869.peg.1909
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229869.peg.2105
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229869.peg.438
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229869.peg.2034
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229869.peg.2035
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229869.peg.1820
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229869.peg.1662
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229869.peg.1425
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229869.peg.1662
Adhesion_of_Campylobacter	Fibronectin/fibrinogen-binding protein	fig|6666666.229869.peg.209
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.229869.peg.578
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.229869.peg.577
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.229869.peg.1252
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.229869.peg.580
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.229869.peg.687
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.1125
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.1664
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.2066
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229869.peg.2449
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.229869.peg.1894
Allantoin_Utilization	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229869.peg.772
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.70
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.349
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.457
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.837
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1367
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1560
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1669
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1995
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2043
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2302
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2672
Aminoglycoside_adenylyltransferases	Aminoglycoside N6'-acetyltransferase (EC 2.3.1.82)	fig|6666666.229869.peg.2354
Aminopeptidases_(EC_3.4.11.-)	Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.24)	fig|6666666.229869.peg.2192
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229869.peg.1459
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229869.peg.296
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229869.peg.1284
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229869.peg.2060
Ammonia_assimilation	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229869.peg.8
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.229869.peg.1249
Anaerobic_respiratory_reductases	Flavodoxin reductases (ferredoxin-NADPH reductases) family 1	fig|6666666.229869.peg.2748
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229869.peg.251
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229869.peg.251
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229869.peg.843
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229869.peg.843
Arginine_Deiminase_Pathway	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229869.peg.1435
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229869.peg.2047
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229869.peg.843
Arginine_and_Ornithine_Degradation	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229869.peg.672
Arginine_and_Ornithine_Degradation	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229869.peg.1435
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229869.peg.2047
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229869.peg.775
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229869.peg.843
Arginine_and_Ornithine_Degradation	Ornithine cyclodeaminase (EC 4.3.1.12)	fig|6666666.229869.peg.1796
Arginine_and_Ornithine_Degradation	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229869.peg.672
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229869.peg.663
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229869.peg.1500
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229869.peg.315
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229869.peg.620
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229869.peg.446
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229869.peg.1417
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229869.peg.458
Bacterial_Cell_Division	Cell division protein FtsJ	fig|6666666.229869.peg.2528
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229869.peg.1596
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229869.peg.1927
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229869.peg.624
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229869.peg.621
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229869.peg.622
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229869.peg.265
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229869.peg.2249
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229869.peg.619
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.229869.peg.626
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229869.peg.122
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229869.peg.1146
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229869.peg.1280
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229869.peg.2594
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229869.peg.426
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229869.peg.425
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229869.peg.424
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.229869.peg.2182
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229869.peg.2458
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229869.peg.625
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229869.peg.315
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229869.peg.620
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229869.peg.458
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229869.peg.1596
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229869.peg.1927
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229869.peg.624
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229869.peg.621
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229869.peg.622
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229869.peg.619
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.229869.peg.626
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229869.peg.1146
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229869.peg.1280
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229869.peg.1281
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229869.peg.2331
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229869.peg.426
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229869.peg.425
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229869.peg.424
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229869.peg.422
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.229869.peg.2182
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229869.peg.1596
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229869.peg.1927
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229869.peg.337
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229869.peg.147
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229869.peg.738
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1258
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1462
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1679
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229869.peg.308
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229869.peg.2022
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.229869.peg.801
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229869.peg.423
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.229869.peg.426
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.229869.peg.425
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.229869.peg.424
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.229869.peg.422
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.229869.peg.2182
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.229869.peg.2584
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.229869.peg.2584
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229869.peg.908
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229869.peg.1780
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229869.peg.2585
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229869.peg.1639
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229869.peg.1817
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229869.peg.1818
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229869.peg.2427
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229869.peg.2458
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229869.peg.2414
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229869.peg.2077
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.229869.peg.2408
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily I	fig|6666666.229869.peg.247
Bile_hydrolysis	Choloylglycine hydrolase (EC 3.5.1.24)	fig|6666666.229869.peg.1386
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.229869.peg.1857
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229869.peg.143
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229869.peg.460
Biotin_biosynthesis	Biotin operon repressor	fig|6666666.229869.peg.1726
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229869.peg.1726
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229869.peg.829
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229869.peg.2732
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229869.peg.142
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229869.peg.144
Biotin_biosynthesis	predicted biotin regulatory protein BioR (GntR family)	fig|6666666.229869.peg.1634
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229869.peg.802
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229869.peg.1907
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229869.peg.2624
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229869.peg.299
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229869.peg.677
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229869.peg.676
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229869.peg.678
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229869.peg.2431
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229869.peg.2685
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229869.peg.2682
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229869.peg.2684
CBSS-176299.4.peg.1996A	Endoribonuclease L-PSP	fig|6666666.229869.peg.2433
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229869.peg.817
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229869.peg.1013
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229869.peg.1122
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229869.peg.1123
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229869.peg.1124
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229869.peg.2073
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229869.peg.1449
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229869.peg.2034
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229869.peg.2035
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229869.peg.452
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229869.peg.761
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229869.peg.1287
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229869.peg.838
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.229869.peg.918
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.229869.peg.1164
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.229869.peg.1538
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229869.peg.2605
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229869.peg.403
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229869.peg.2605
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229869.peg.403
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229869.peg.615
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229869.peg.616
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229869.peg.1683
CBSS-292415.3.peg.2341	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229869.peg.2131
CBSS-296591.1.peg.2330	UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-)	fig|6666666.229869.peg.359
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229869.peg.342
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229869.peg.2681
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229869.peg.340
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229869.peg.2740
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229869.peg.2183
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229869.peg.2184
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229869.peg.2418
CBSS-314276.3.peg.1499	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229869.peg.1920
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229869.peg.896
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.229869.peg.898
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.229869.peg.897
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.229869.peg.167
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229869.peg.1076
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229869.peg.1527
CBSS-316057.3.peg.1308	RNA polymerase sigma-54 factor RpoN	fig|6666666.229869.peg.2130
CBSS-316273.3.peg.227	Alpha-2-macroglobulin	fig|6666666.229869.peg.2374
CBSS-316273.3.peg.227	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229869.peg.2371
CBSS-316407.3.peg.2816	Protein of unknown function DUF541	fig|6666666.229869.peg.205
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229869.peg.1662
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229869.peg.1662
CBSS-323098.3.peg.2823	Flagellar motor rotation protein MotB	fig|6666666.229869.peg.1786
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229869.peg.587
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229869.peg.589
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229869.peg.2131
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229869.peg.2365
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229869.peg.1967
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229869.peg.1758
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229869.peg.2276
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229869.peg.430
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229869.peg.429
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229869.peg.834
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229869.peg.1698
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229869.peg.425
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229869.peg.424
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.229869.peg.2182
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229869.peg.463
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229869.peg.480
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229869.peg.481
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229869.peg.1923
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229869.peg.1681
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229869.peg.2194
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229869.peg.250
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229869.peg.1550
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.1125
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.1664
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.2066
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229869.peg.2549
CBSS-393130.3.peg.794	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229869.peg.1969
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229869.peg.1938
CBSS-469378.4.peg.430	FIG002344: Hydrolase (HAD superfamily)	fig|6666666.229869.peg.1529
CBSS-469378.4.peg.430	RecA protein	fig|6666666.229869.peg.899
CBSS-521098.4.peg.1460	FIG001614: Membrane protein	fig|6666666.229869.peg.1592
CBSS-521098.4.peg.1460	FIG015373: Membrane protein	fig|6666666.229869.peg.1591
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229869.peg.583
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229869.peg.1250
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229869.peg.1251
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.229869.peg.585
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229869.peg.584
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229869.peg.586
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229869.peg.586
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229869.peg.2212
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229869.peg.2188
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229869.peg.517
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229869.peg.458
CBSS-83331.1.peg.3039	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229869.peg.2189
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229869.peg.423
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229869.peg.2186
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.1125
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.1664
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.2066
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229869.peg.796
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229869.peg.1230
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229869.peg.166
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229869.peg.296
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229869.peg.148
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229869.peg.147
CMP-N-acetylneuraminate_Biosynthesis	N-acetylneuraminate synthase (EC 2.5.1.56)	fig|6666666.229869.peg.814
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.229869.peg.357
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229869.peg.1243
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229869.peg.1242
CRISPRs	CRISPR-associated protein, Csn1 family	fig|6666666.229869.peg.1244
CRISPRs	CRISPR-associated protein, Csn2 family	fig|6666666.229869.peg.1241
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229869.peg.1851
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229869.peg.345
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229869.peg.2137
Cadmium_resistance	Cadmium efflux system accessory protein	fig|6666666.229869.peg.397
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229869.peg.86
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229869.peg.290
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229869.peg.2759
Calvin-Benson_cycle	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229869.peg.151
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229869.peg.75
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229869.peg.1940
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.229869.peg.466
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229869.peg.589
Carbon_Starvation	Carbon starvation protein A	fig|6666666.229869.peg.1756
Carbon_Starvation	Carbon storage regulator	fig|6666666.229869.peg.2175
Carbon_storage_regulator	Carbon storage regulator	fig|6666666.229869.peg.2175
Carbon_storage_regulator	Flagellar assembly factor FliW	fig|6666666.229869.peg.2176
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229869.peg.1768
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229869.peg.1146
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229869.peg.1280
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229869.peg.1281
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229869.peg.2331
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229869.peg.1461
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229869.peg.1767
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229869.peg.1535
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229869.peg.1536
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229869.peg.2338
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229869.peg.345
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229869.peg.2137
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229869.peg.2134
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229869.peg.2136
Cell_Division_Subsystem_including_YidCD	RNA-binding protein Jag	fig|6666666.229869.peg.2138
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229869.peg.2135
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229869.peg.2014
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229869.peg.990
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229869.peg.315
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229869.peg.446
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229869.peg.1417
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229869.peg.243
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229869.peg.1220
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229869.peg.2422
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229869.peg.761
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229869.peg.491
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229869.peg.435
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily S (as in PMID19099556)	fig|6666666.229869.peg.2687
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Betaine aldehyde dehydrogenase (EC 1.2.1.8)	fig|6666666.229869.peg.1686
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.229869.peg.1517
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Sarcosine oxidase alpha subunit (EC 1.5.3.1)	fig|6666666.229869.peg.1632
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Sarcosine oxidase alpha subunit (EC 1.5.3.1)	fig|6666666.229869.peg.1896
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229869.peg.1968
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229869.peg.152
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229869.peg.153
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229869.peg.1663
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229869.peg.107
Chorismate_Synthesis	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229869.peg.276
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229869.peg.650
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229869.peg.152
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229869.peg.153
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229869.peg.2077
Citrate_Metabolism,_Transport,_and_Regulation	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)	fig|6666666.229869.peg.256
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase alpha chain (EC 4.1.3.6)	fig|6666666.229869.peg.163
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.229869.peg.162
Citrate_Metabolism,_Transport,_and_Regulation	[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	fig|6666666.229869.peg.257
ClpAS_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229869.peg.2385
ClpAS_cluster	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229869.peg.2386
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229869.peg.134
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229869.peg.245
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229869.peg.152
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229869.peg.153
CoA_disulfide_thiol-disulfide_redox_system	CoA-disulfide reductase (EC 1.8.1.14)	fig|6666666.229869.peg.1617
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.229869.peg.2149
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.229869.peg.2142
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229869.peg.2147
Cobalamin_synthesis	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	fig|6666666.229869.peg.1558
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229869.peg.1276
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.229869.peg.1883
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.229869.peg.1271
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.229869.peg.1277
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.229869.peg.192
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.229869.peg.1270
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.229869.peg.1981
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.229869.peg.2201
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.229869.peg.1882
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.229869.peg.1853
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.229869.peg.893
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.229869.peg.1884
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229869.peg.1229
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229869.peg.2248
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229869.peg.1684
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.229869.peg.73
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229869.peg.154
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229869.peg.403
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229869.peg.124
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229869.peg.2121
Colicin_V_and_Bacteriocin_Production_Cluster	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229869.peg.1294
Colicin_V_and_Bacteriocin_Production_Cluster	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229869.peg.2125
Colicin_V_and_Bacteriocin_Production_Cluster	Colicin V production protein	fig|6666666.229869.peg.2524
Colicin_V_and_Bacteriocin_Production_Cluster	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229869.peg.698
Colicin_V_and_Bacteriocin_Production_Cluster	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229869.peg.698
Colicin_V_and_Bacteriocin_Production_Cluster	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229869.peg.2257
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229869.peg.1968
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229869.peg.152
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229869.peg.153
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229869.peg.1663
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229869.peg.107
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229869.peg.650
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229869.peg.152
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229869.peg.153
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229869.peg.2077
Conjugative_transfer	Conjugative transfer protein TrbB	fig|6666666.229869.peg.1191
Conjugative_transfer	Conjugative transfer protein TrbE	fig|6666666.229869.peg.1186
Conjugative_transfer	Conjugative transfer protein TrbF	fig|6666666.229869.peg.1183
Conjugative_transfer	Conjugative transfer protein TrbG	fig|6666666.229869.peg.1182
Conjugative_transfer	Conjugative transfer protein TrbI	fig|6666666.229869.peg.1181
Conjugative_transfer	Conjugative transfer protein TrbL	fig|6666666.229869.peg.1184
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229869.peg.615
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229869.peg.2033
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229869.peg.148
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229869.peg.147
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229869.peg.241
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229869.peg.2428
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229869.peg.1940
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229869.peg.616
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Serine/threonine protein kinase PrkC, regulator of stationary phase	fig|6666666.229869.peg.149
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1258
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1462
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1679
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229869.peg.308
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229869.peg.2022
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229869.peg.1674
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229869.peg.2000
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229869.peg.2001
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229869.peg.394
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229869.peg.1414
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229869.peg.1761
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229869.peg.394
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229869.peg.1414
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229869.peg.1761
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.229869.peg.2278
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229869.peg.583
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229869.peg.1250
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229869.peg.1251
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229869.peg.1612
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229869.peg.1612
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229869.peg.772
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	D-glycerate transporter (predicted)	fig|6666666.229869.peg.1561
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.70
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.349
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.457
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.837
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1367
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1560
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1669
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1995
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2043
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2302
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2672
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229869.peg.772
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	D-glycerate transporter (predicted)	fig|6666666.229869.peg.1561
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.70
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.349
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.457
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.837
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1367
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1560
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1669
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1995
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2043
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2302
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2672
D-ribose_utilization	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229869.peg.151
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229869.peg.75
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229869.peg.250
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229869.peg.155
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229869.peg.2000
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229869.peg.2001
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229869.peg.2328
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229869.peg.1461
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229869.peg.1767
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229869.peg.1951
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229869.peg.1195
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.229869.peg.240
DNA_processing_cluster	Protein involved in catabolism of external DNA	fig|6666666.229869.peg.1464
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229869.peg.239
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229869.peg.763
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229869.peg.408
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229869.peg.2044
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229869.peg.811
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229869.peg.2011
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229869.peg.801
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229869.peg.472
DNA_repair,_bacterial	DNA-cytosine methyltransferase (EC 2.1.1.37)	fig|6666666.229869.peg.1159
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229869.peg.159
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229869.peg.1198
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229869.peg.1377
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229869.peg.1457
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.229869.peg.2739
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229869.peg.756
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229869.peg.2436
DNA_repair,_bacterial	Exonuclease SbcC	fig|6666666.229869.peg.1598
DNA_repair,_bacterial	Exonuclease SbcD	fig|6666666.229869.peg.1599
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229869.peg.180
DNA_repair,_bacterial	Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	fig|6666666.229869.peg.512
DNA_repair,_bacterial	Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	fig|6666666.229869.peg.570
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229869.peg.1550
DNA_repair,_bacterial	RecA protein	fig|6666666.229869.peg.899
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229869.peg.116
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229869.peg.915
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229869.peg.1120
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229869.peg.1163
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229869.peg.2506
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229869.peg.2435
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229869.peg.1934
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.229869.peg.331
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229869.peg.1245
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.229869.peg.1452
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229869.peg.1536
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229869.peg.1451
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.229869.peg.899
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229869.peg.239
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229869.peg.116
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229869.peg.915
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229869.peg.1120
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229869.peg.1163
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229869.peg.2328
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.229869.peg.899
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase Rep	fig|6666666.229869.peg.867
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229869.peg.1681
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229869.peg.2194
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229869.peg.1934
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.229869.peg.899
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229869.peg.241
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229869.peg.1768
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229869.peg.1461
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229869.peg.1767
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229869.peg.1535
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229869.peg.1536
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.229869.peg.282
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.229869.peg.2277
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.229869.peg.2765
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229869.peg.615
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229869.peg.1195
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229869.peg.1461
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229869.peg.1767
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229869.peg.2393
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229869.peg.2276
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229869.peg.279
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229869.peg.2125
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.229869.peg.2593
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.229869.peg.515
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.229869.peg.1117
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.229869.peg.1118
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229869.peg.2593
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.229869.peg.516
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.229869.peg.375
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.229869.peg.502
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229869.peg.2592
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229869.peg.1820
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.229869.peg.1638
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.229869.peg.1638
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.229869.peg.2404
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.229869.peg.793
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.229869.peg.793
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229869.peg.771
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229869.peg.2401
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229869.peg.2270
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229869.peg.1438
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229869.peg.1425
Deoxyribose_and_Deoxynucleoside_Catabolism	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229869.peg.2327
Dihydroxyacetone_kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), ADP-binding subunit	fig|6666666.229869.peg.2171
Dihydroxyacetone_kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), dihydroxyacetone binding subunit	fig|6666666.229869.peg.2170
Dipeptidases_(EC_3.4.13.-)	Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21)	fig|6666666.229869.peg.74
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229869.peg.2293
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229869.peg.143
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229869.peg.460
ECF_class_transporters	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229869.peg.2377
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.191
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.864
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.870
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.1473
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.1495
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.1518
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.1917
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.2356
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229869.peg.189
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229869.peg.863
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229869.peg.872
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229869.peg.1471
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229869.peg.1493
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229869.peg.1516
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229869.peg.1520
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229869.peg.1524
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229869.peg.1915
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229869.peg.2355
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229869.peg.142
ECF_class_transporters	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229869.peg.2378
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.190
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.865
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.871
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.1472
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.1494
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.1515
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.1519
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.1916
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.2067
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229869.peg.2357
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229869.peg.144
ECF_class_transporters	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229869.peg.2376
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229869.peg.1612
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229869.peg.1612
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229869.peg.825
Entner-Doudoroff_Pathway	Hexokinase (EC 2.7.1.1)	fig|6666666.229869.peg.2058
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229869.peg.290
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229869.peg.2759
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229869.peg.98
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229869.peg.1932
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229869.peg.1999
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229869.peg.838
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229869.peg.1725
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229869.peg.996
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229869.peg.1287
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.229869.peg.1285
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.229869.peg.1295
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229869.peg.1294
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.229869.peg.748
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229869.peg.1292
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229869.peg.1293
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.229869.peg.2586
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.229869.peg.1286
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229869.peg.838
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229869.peg.76
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229869.peg.1725
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229869.peg.838
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229869.peg.1693
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229869.peg.1717
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.229869.peg.774
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229869.peg.76
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229869.peg.1725
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229869.peg.284
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229869.peg.2526
Flagellar_motility	Flagellar basal-body rod modification protein FlgD	fig|6666666.229869.peg.1782
Flagellar_motility	Flagellar biosynthesis protein FlhA	fig|6666666.229869.peg.1713
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229869.peg.1714
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229869.peg.2227
Flagellar_motility	Flagellar biosynthesis protein FlhF	fig|6666666.229869.peg.1854
Flagellar_motility	Flagellar biosynthesis protein FliR	fig|6666666.229869.peg.1715
Flagellar_motility	Flagellar motor rotation protein MotA	fig|6666666.229869.peg.1785
Flagellar_motility	Flagellar motor rotation protein MotB	fig|6666666.229869.peg.1786
Flagellar_motility	Flagellar motor switch protein FliM	fig|6666666.229869.peg.1788
Flagellar_motility	Flagellar motor switch protein FliN	fig|6666666.229869.peg.1789
Flagellar_motility	Flagellar synthesis regulator FleN	fig|6666666.229869.peg.1855
Flagellar_motility	Flagellum-specific ATP synthase FliI	fig|6666666.229869.peg.605
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.229869.peg.2130
Flagellar_motility	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229869.peg.287
Flagellum	Flagellar M-ring protein FliF	fig|6666666.229869.peg.608
Flagellum	Flagellar assembly protein FliH	fig|6666666.229869.peg.606
Flagellum	Flagellar basal-body rod modification protein FlgD	fig|6666666.229869.peg.1782
Flagellum	Flagellar basal-body rod protein FlgB	fig|6666666.229869.peg.611
Flagellum	Flagellar basal-body rod protein FlgC	fig|6666666.229869.peg.610
Flagellum	Flagellar basal-body rod protein FlgF	fig|6666666.229869.peg.767
Flagellum	Flagellar basal-body rod protein FlgG	fig|6666666.229869.peg.766
Flagellum	Flagellar biosynthesis protein FlhA	fig|6666666.229869.peg.1713
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229869.peg.1714
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229869.peg.2227
Flagellum	Flagellar biosynthesis protein FlhF	fig|6666666.229869.peg.1854
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229869.peg.1787
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229869.peg.2205
Flagellum	Flagellar biosynthesis protein FliP	fig|6666666.229869.peg.1791
Flagellum	Flagellar biosynthesis protein FliQ	fig|6666666.229869.peg.1716
Flagellum	Flagellar biosynthesis protein FliR	fig|6666666.229869.peg.1715
Flagellum	Flagellar biosynthesis protein FliS	fig|6666666.229869.peg.1648
Flagellum	Flagellar biosynthesis protein FliZ	fig|6666666.229869.peg.1790
Flagellum	Flagellar hook protein FlgE	fig|6666666.229869.peg.1783
Flagellum	Flagellar hook-associated protein FlgK	fig|6666666.229869.peg.2178
Flagellum	Flagellar hook-associated protein FlgL	fig|6666666.229869.peg.2177
Flagellum	Flagellar hook-associated protein FliD	fig|6666666.229869.peg.304
Flagellum	Flagellar hook-basal body complex protein FliE	fig|6666666.229869.peg.609
Flagellum	Flagellar hook-length control protein FliK	fig|6666666.229869.peg.1781
Flagellum	Flagellar motor rotation protein MotA	fig|6666666.229869.peg.1785
Flagellum	Flagellar motor rotation protein MotB	fig|6666666.229869.peg.1786
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229869.peg.493
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229869.peg.607
Flagellum	Flagellar motor switch protein FliM	fig|6666666.229869.peg.1788
Flagellum	Flagellar motor switch protein FliN	fig|6666666.229869.peg.1789
Flagellum	Flagellar protein FlbB	fig|6666666.229869.peg.441
Flagellum	Flagellar protein FlbD	fig|6666666.229869.peg.1784
Flagellum	Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)	fig|6666666.229869.peg.765
Flagellum	Flagellar protein FliJ	fig|6666666.229869.peg.604
Flagellum	Flagellar synthesis regulator FleN	fig|6666666.229869.peg.1855
Flagellum	Flagellin protein FlaA	fig|6666666.229869.peg.301
Flagellum	Flagellin protein FlaA	fig|6666666.229869.peg.302
Flagellum	Flagellin protein FlaA	fig|6666666.229869.peg.769
Flagellum	Flagellin protein FlaG	fig|6666666.229869.peg.303
Flagellum	Flagellum-specific ATP synthase FliI	fig|6666666.229869.peg.605
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229869.peg.429
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229869.peg.834
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229869.peg.1698
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.229869.peg.2130
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229869.peg.458
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgB	fig|6666666.229869.peg.611
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgC	fig|6666666.229869.peg.610
Flagellum_in_Campylobacter	Flagellar hook-basal body complex protein FliE	fig|6666666.229869.peg.609
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229869.peg.301
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229869.peg.302
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229869.peg.769
Flavodoxin	Flavodoxin	fig|6666666.229869.peg.646
Flavodoxin	Flavodoxin	fig|6666666.229869.peg.1364
Flavodoxin	Flavodoxin	fig|6666666.229869.peg.1489
Flavodoxin	Flavodoxin	fig|6666666.229869.peg.1606
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229869.peg.780
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229869.peg.698
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229869.peg.698
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229869.peg.1442
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.229869.peg.1261
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229869.peg.446
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229869.peg.1417
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229869.peg.243
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229869.peg.435
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229869.peg.193
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229869.peg.2348
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229869.peg.328
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229869.peg.1682
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229869.peg.2569
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229869.peg.2349
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229869.peg.2350
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229869.peg.2756
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229869.peg.2756
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229869.peg.328
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229869.peg.2604
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229869.peg.2743
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.229869.peg.1416
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229869.peg.775
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229869.peg.775
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229869.peg.124
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229869.peg.2121
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229869.peg.2502
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229869.peg.333
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229869.peg.1284
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229869.peg.2060
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229869.peg.8
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229869.peg.775
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229869.peg.775
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229869.peg.2131
Glutathione:_Non-redox_reactions	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229869.peg.1497
Glutathione:_Redox_cycle	Glutathione peroxidase (EC 1.11.1.9)	fig|6666666.229869.peg.2744
Glycerate_metabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229869.peg.772
Glycerate_metabolism	D-glycerate transporter (predicted)	fig|6666666.229869.peg.1561
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.70
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.349
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.457
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.837
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1367
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1560
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1669
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1995
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2043
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2302
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2672
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229869.peg.1999
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229869.peg.2578
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.229869.peg.28
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.229869.peg.2426
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229869.peg.1633
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229869.peg.1897
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229869.peg.2413
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229869.peg.817
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229869.peg.1013
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	NADH peroxidase (EC 1.11.1.1)	fig|6666666.229869.peg.1671
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Probable glycerol transport protein	fig|6666666.229869.peg.1014
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229869.peg.748
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229869.peg.1693
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229869.peg.1717
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229869.peg.2015
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229869.peg.411
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229869.peg.1873
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229869.peg.1965
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.70
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.349
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.457
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.837
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1367
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1560
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1669
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1995
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2043
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2302
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2672
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229869.peg.2578
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229869.peg.1633
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229869.peg.1897
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229869.peg.2413
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229869.peg.2187
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229869.peg.2324
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229869.peg.2133
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229869.peg.1874
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229869.peg.2324
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229869.peg.166
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229869.peg.174
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.70
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.349
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.457
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.837
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1367
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1560
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1669
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1995
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2043
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2302
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2672
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.229869.peg.167
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229869.peg.168
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229869.peg.169
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229869.peg.272
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229869.peg.271
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229869.peg.2521
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229869.peg.1874
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229869.peg.2222
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229869.peg.166
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229869.peg.164
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.229869.peg.167
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229869.peg.168
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229869.peg.169
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B alpha subunit (EC 1.21.4.4)	fig|6666666.229869.peg.1691
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229869.peg.1688
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229869.peg.1689
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Betaine reductase component B beta subunit (EC 1.21.4.4)	fig|6666666.229869.peg.1690
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B alpha subunit (EC 1.21.4.2)	fig|6666666.229869.peg.2389
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B beta subunit (EC 1.21.4.2)	fig|6666666.229869.peg.2389
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229869.peg.2390
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229869.peg.2391
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229869.peg.2392
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 1	fig|6666666.229869.peg.1525
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 2	fig|6666666.229869.peg.1526
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229869.peg.1073
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229869.peg.1074
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229869.peg.1075
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229869.peg.1076
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229869.peg.1527
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229869.peg.1077
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229869.peg.2144
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229869.peg.2466
Glycogen_metabolism	Glycogen branching enzyme, GH-57-type, archaeal (EC 2.4.1.18)	fig|6666666.229869.peg.688
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229869.peg.1666
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229869.peg.2117
Glycogen_metabolism	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229869.peg.206
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229869.peg.1827
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229869.peg.825
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229869.peg.86
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229869.peg.1963
Glycolysis_and_Gluconeogenesis	Hexokinase (EC 2.7.1.1)	fig|6666666.229869.peg.2058
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229869.peg.290
Glycolysis_and_Gluconeogenesis	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229869.peg.78
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229869.peg.2759
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229869.peg.98
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229869.peg.1932
Glycolysis_and_Gluconeogenesis	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit (EC 2.7.1.90)	fig|6666666.229869.peg.1704
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.229869.peg.238
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229869.peg.1999
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229869.peg.277
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229869.peg.975
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229869.peg.589
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229869.peg.1451
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229869.peg.2594
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229869.peg.1748
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229869.peg.583
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229869.peg.1250
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229869.peg.1251
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229869.peg.584
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229869.peg.586
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229869.peg.1234
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229869.peg.2417
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229869.peg.1235
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229869.peg.648
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229869.peg.836
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229869.peg.1236
HPr_catabolite_repression_system	Catabolite repression HPr-like protein Crh	fig|6666666.229869.peg.479
HPr_catabolite_repression_system	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229869.peg.478
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229869.peg.1234
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229869.peg.2417
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229869.peg.1235
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229869.peg.1236
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.229869.peg.310
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.229869.peg.647
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229869.peg.2260
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229869.peg.2610
Heat_shock_dnaK_gene_cluster_extended	Signal peptidase-like protein	fig|6666666.229869.peg.1654
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229869.peg.2596
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229869.peg.1568
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229869.peg.2601
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229869.peg.312
Heme_biosynthesis_orphans	Radical SAM domain heme biosynthesis protein	fig|6666666.229869.peg.485
Hfl_operon	GTP-binding protein HflX	fig|6666666.229869.peg.1800
Hfl_operon	HflC protein	fig|6666666.229869.peg.442
Hfl_operon	HflK protein	fig|6666666.229869.peg.443
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229869.peg.1460
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.229869.peg.1296
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.229869.peg.1720
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.229869.peg.1931
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229869.peg.737
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229869.peg.2260
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229869.peg.1259
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229869.peg.1260
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229869.peg.1678
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1258
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1462
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1679
Hypothetical_protein_HNE_2485	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229869.peg.1983
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229869.peg.1073
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229869.peg.1075
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229869.peg.1688
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229869.peg.1690
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229869.peg.2065
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229869.peg.2390
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229869.peg.2392
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.229869.peg.2738
Integrons	Integron integrase IntIPac	fig|6666666.229869.peg.2639
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229869.peg.1770
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229869.peg.615
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229869.peg.586
Inteins	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229869.peg.78
Inteins	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229869.peg.1008
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229869.peg.444
Inteins	Translation initiation factor 2	fig|6666666.229869.peg.676
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, ATP-binding subunit	fig|6666666.229869.peg.263
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, permease protein 2	fig|6666666.229869.peg.264
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, substrate binding protein	fig|6666666.229869.peg.266
Iron_transport_system_including_ABC_transporter	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229869.peg.268
Iron_transport_system_including_ABC_transporter	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229869.peg.267
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229869.peg.251
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229869.peg.2188
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229869.peg.2583
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229869.peg.517
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229869.peg.2237
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229869.peg.2238
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229869.peg.438
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229869.peg.686
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229869.peg.251
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229869.peg.2186
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229869.peg.251
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229869.peg.251
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229869.peg.251
Isoprenoinds_for_Quinones	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229869.peg.2568
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229869.peg.2186
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229869.peg.890
KH_domain_RNA_binding_protein_YlqC	KH domain RNA binding protein YlqC	fig|6666666.229869.peg.891
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229869.peg.892
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.229869.peg.1407
LOS_core_oligosaccharide_biosynthesis	Beta-1,3-glucosyltransferase	fig|6666666.229869.peg.352
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229869.peg.2100
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229869.peg.2098
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229869.peg.2099
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229869.peg.2101
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229869.peg.2096
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229869.peg.1093
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229869.peg.2097
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229869.peg.342
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229869.peg.2681
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229869.peg.418
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229869.peg.328
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229869.peg.2604
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229869.peg.2743
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229869.peg.1432
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229869.peg.2230
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229869.peg.2308
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229869.peg.2304
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	fig|6666666.229869.peg.2305
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229869.peg.342
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229869.peg.2681
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229869.peg.2604
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229869.peg.2743
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.229869.peg.357
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-)	fig|6666666.229869.peg.359
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229869.peg.164
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-)	fig|6666666.229869.peg.1086
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229869.peg.214
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229869.peg.237
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229869.peg.1893
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229869.peg.2229
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229869.peg.2766
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229869.peg.1923
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229869.peg.380
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229869.peg.1737
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229869.peg.2461
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229869.peg.2460
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229869.peg.2462
LysR-family_proteins_in_Escherichia_coli	Chromosome initiation inhibitor	fig|6666666.229869.peg.13
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229869.peg.1209
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229869.peg.1623
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.229869.peg.1699
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229869.peg.430
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229869.peg.429
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229869.peg.834
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229869.peg.1698
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229869.peg.2050
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229869.peg.2022
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229869.peg.583
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229869.peg.1250
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229869.peg.1251
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229869.peg.742
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229869.peg.909
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.229869.peg.1825
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229869.peg.2144
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229869.peg.418
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229869.peg.2117
Maltose_and_Maltodextrin_Utilization	Oligo-1,6-glucosidase (EC 3.2.1.10)	fig|6666666.229869.peg.1660
Mannitol_Utilization	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229869.peg.478
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229869.peg.1682
MazEF_toxin-antitoxing_(programmed_cell_death)_system	Programmed cell death antitoxin MazE	fig|6666666.229869.peg.1573
MazEF_toxin-antitoxing_(programmed_cell_death)_system	Programmed cell death antitoxin YdcD	fig|6666666.229869.peg.1974
MazEF_toxin-antitoxing_(programmed_cell_death)_system	Programmed cell death toxin MazF	fig|6666666.229869.peg.1574
MazEF_toxin-antitoxing_(programmed_cell_death)_system	Programmed cell death toxin YdcE	fig|6666666.229869.peg.1973
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229869.peg.796
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229869.peg.1230
Methanogenesis_strays	Ni2+-binding GTPase involved in regulation of expression and maturation of hydrogenase	fig|6666666.229869.peg.1411
Methanogenesis_strays	Uncharacterized ABC transporter ATP-binding protein MJ0121	fig|6666666.229869.peg.1412
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229869.peg.1113
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229869.peg.1513
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.229869.peg.2319
Methionine_Degradation	Methionine transporter MetT	fig|6666666.229869.peg.2317
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229869.peg.1145
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229869.peg.2321
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229869.peg.1662
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229869.peg.2057
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229869.peg.1662
Methionine_Salvage	5-methylthioribose kinase (EC 2.7.1.100)	fig|6666666.229869.peg.1115
Methionine_Salvage	Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)	fig|6666666.229869.peg.127
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229869.peg.2015
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229869.peg.2015
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229869.peg.2131
Methylglyoxal_Metabolism	Lactoylglutathione lyase (EC 4.4.1.5)	fig|6666666.229869.peg.1497
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229869.peg.1928
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229869.peg.213
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229869.peg.2601
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32)	fig|6666666.229869.peg.259
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32)	fig|6666666.229869.peg.258
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.77
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.93
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.186
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.723
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.1002
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.1274
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.1463
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229869.peg.1834
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229869.peg.2048
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229869.peg.796
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229869.peg.1230
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229869.peg.2365
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229869.peg.1399
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229869.peg.2760
Murein_Hydrolases	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	fig|6666666.229869.peg.2252
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229869.peg.2102
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229869.peg.2103
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229869.peg.345
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229869.peg.2137
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Protein YidD	fig|6666666.229869.peg.2136
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	RNA-binding protein Jag	fig|6666666.229869.peg.2138
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.229869.peg.2360
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.229869.peg.2359
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.229869.peg.2358
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229869.peg.731
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229869.peg.730
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229869.peg.729
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229869.peg.1470
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229869.peg.1046
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229869.peg.602
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229869.peg.1744
N-linked_Glycosylation_in_Bacteria	Phospholipid-lipopolysaccharide ABC transporter	fig|6666666.229869.peg.2092
N-linked_Glycosylation_in_Bacteria	UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-)	fig|6666666.229869.peg.359
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229869.peg.342
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229869.peg.2681
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229869.peg.1758
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.229869.peg.379
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229869.peg.196
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.229869.peg.379
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229869.peg.1595
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.229869.peg.2686
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229869.peg.2595
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.229869.peg.389
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229869.peg.388
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229869.peg.981
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229869.peg.982
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229869.peg.983
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229869.peg.984
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229869.peg.985
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Sodium-dependent phosphate transporter	fig|6666666.229869.peg.2532
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229869.peg.2349
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229869.peg.2350
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.229869.peg.1409
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.229869.peg.1408
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229869.peg.2188
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229869.peg.2583
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229869.peg.517
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229869.peg.2237
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229869.peg.2238
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229869.peg.438
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229869.peg.686
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229869.peg.2243
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229869.peg.1758
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229869.peg.737
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229869.peg.674
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229869.peg.677
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229869.peg.675
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229869.peg.676
Omega_peptidases_(EC_3.4.19.-)	Acylamino-acid-releasing enzyme (EC 3.4.19.1)	fig|6666666.229869.peg.1667
Omega_peptidases_(EC_3.4.19.-)	Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	fig|6666666.229869.peg.1593
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229869.peg.780
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229869.peg.1749
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229869.peg.1721
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229869.peg.1755
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229869.peg.1755
Oxidative_stress	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229869.peg.1757
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.229869.peg.2582
Oxidative_stress	Rubrerythrin	fig|6666666.229869.peg.1453
Oxidative_stress	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229869.peg.2680
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.229869.peg.1922
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229869.peg.151
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229869.peg.75
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229869.peg.1820
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229869.peg.1940
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.229869.peg.466
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229869.peg.1096
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229869.peg.1096
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229869.peg.458
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229869.peg.2146
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229869.peg.796
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229869.peg.1230
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229869.peg.333
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229869.peg.2733
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229869.peg.423
Peptidoglycan_Biosynthesis	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229869.peg.2371
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.229869.peg.2272
Peptidoglycan_Biosynthesis	Rare lipoprotein A precursor	fig|6666666.229869.peg.2470
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.229869.peg.422
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229869.peg.1673
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229869.peg.1222
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229869.peg.2523
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229869.peg.697
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229869.peg.61
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229869.peg.623
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229869.peg.2146
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229869.peg.697
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229869.peg.61
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--L-ornithine ligase	fig|6666666.229869.peg.994
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229869.peg.623
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.229869.peg.84
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229869.peg.2242
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229869.peg.2569
Periplasmic_Stress_Response	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229869.peg.2189
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229869.peg.1935
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegS	fig|6666666.229869.peg.2228
Phage_capsid_proteins	Phage head maturation protease	fig|6666666.229869.peg.2713
Phage_capsid_proteins	Phage minor capsid protein	fig|6666666.229869.peg.931
Phage_capsid_proteins	Phage minor capsid protein	fig|6666666.229869.peg.939
Phage_packaging_machinery	Phage portal protein	fig|6666666.229869.peg.2712
Phage_packaging_machinery	Phage terminase large subunit	fig|6666666.229869.peg.2711
Phage_packaging_machinery	Phage terminase, large subunit	fig|6666666.229869.peg.936
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229869.peg.1770
Phage_replication	DNA transposition protein	fig|6666666.229869.peg.541
Phage_replication	Phage replication initiation protein	fig|6666666.229869.peg.1165
Phage_replication	Phage replication initiation protein	fig|6666666.229869.peg.2705
Phage_tail_fiber_proteins	Phage tail fiber protein	fig|6666666.229869.peg.949
Phage_tail_fiber_proteins	Phage tail fiber protein	fig|6666666.229869.peg.2722
Phage_tail_proteins	Phage tail length tape-measure protein	fig|6666666.229869.peg.565
Phage_tail_proteins_2	Phage tail length tape-measure protein	fig|6666666.229869.peg.565
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229869.peg.160
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229869.peg.2274
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229869.peg.2641
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229869.peg.2275
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death antitoxin YdcD	fig|6666666.229869.peg.1974
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Programmed cell death toxin YdcE	fig|6666666.229869.peg.1973
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229869.peg.276
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.229869.peg.770
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229869.peg.632
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229869.peg.633
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.229869.peg.634
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229869.peg.586
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229869.peg.586
Phosphate_metabolism	Pyrophosphate-energized proton pump (EC 3.6.1.1)	fig|6666666.229869.peg.1212
Phosphate_metabolism	Sodium-dependent phosphate transporter	fig|6666666.229869.peg.2532
Phosphoenolpyruvate_phosphomutase	2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)	fig|6666666.229869.peg.364
Phosphoenolpyruvate_phosphomutase	Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)	fig|6666666.229869.peg.366
Phosphoenolpyruvate_phosphomutase	Phosphonopyruvate decarboxylase (EC 4.1.1.82)	fig|6666666.229869.peg.365
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229869.peg.2147
Phosphoglycerate_mutase_protein_family	Carboxyl-terminal protease (EC 3.4.21.102)	fig|6666666.229869.peg.2609
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229869.peg.98
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229869.peg.1932
Phosphoglycerate_mutase_protein_family	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229869.peg.2023
Photorespiration_(oxidative_C2_cycle)	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229869.peg.772
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229869.peg.166
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229869.peg.164
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.70
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.349
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.457
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.837
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1367
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1560
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1669
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1995
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2043
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2302
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2672
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.229869.peg.167
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229869.peg.168
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229869.peg.169
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229869.peg.1827
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229869.peg.1874
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229869.peg.1146
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229869.peg.1280
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229869.peg.1281
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229869.peg.2331
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229869.peg.333
Polyadenylation_bacterial	Poly(A) polymerase (EC 2.7.7.19)	fig|6666666.229869.peg.2752
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229869.peg.738
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229869.peg.743
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229869.peg.1662
Polyamine_Metabolism	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229869.peg.672
Polyamine_Metabolism	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229869.peg.2047
Polyamine_Metabolism	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229869.peg.672
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229869.peg.31
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229869.peg.321
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229869.peg.1587
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229869.peg.251
Polyprenyl_Diphosphate_Biosynthesis	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229869.peg.2568
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229869.peg.2186
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229869.peg.2242
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229869.peg.2569
Potassium_homeostasis	Glutathione-regulated potassium-efflux system ancillary protein KefG	fig|6666666.229869.peg.72
Potassium_homeostasis	Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase)	fig|6666666.229869.peg.1741
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229869.peg.2234
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229869.peg.1259
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229869.peg.1260
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229869.peg.1678
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229869.peg.1259
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229869.peg.1260
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229869.peg.1678
Potassium_homeostasis	Potassium voltage-gated channel subfamily KQT	fig|6666666.229869.peg.2084
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1258
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1462
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1679
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1258
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1462
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229869.peg.1679
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229869.peg.2455
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229869.peg.2455
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.229869.peg.1779
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229869.peg.775
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229869.peg.1725
Proteasome_bacterial	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229869.peg.120
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229869.peg.121
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229869.peg.2143
Proteasome_bacterial	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229869.peg.612
Proteasome_bacterial	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229869.peg.613
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229869.peg.1140
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229869.peg.757
Proteasome_bacterial	Site-specific tyrosine recombinase	fig|6666666.229869.peg.614
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229869.peg.1234
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229869.peg.2417
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229869.peg.1235
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229869.peg.2042
Protein_chaperones	ClpB protein	fig|6666666.229869.peg.2200
Protein_chaperones	ClpB protein	fig|6666666.229869.peg.2465
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229869.peg.1236
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229869.peg.1751
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229869.peg.2083
Protein_degradation	Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)	fig|6666666.229869.peg.2384
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229869.peg.2385
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229869.peg.120
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229869.peg.2386
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229869.peg.121
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229869.peg.2143
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229869.peg.612
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229869.peg.613
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229869.peg.1140
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229869.peg.757
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229869.peg.2200
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229869.peg.2465
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229869.peg.2011
Proteolysis_in_bacteria,_ATP-dependent	Nucleotide excision repair protein, with UvrB/UvrC motif	fig|6666666.229869.peg.2463
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegS	fig|6666666.229869.peg.2228
Purine_Utilization	Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4)	fig|6666666.229869.peg.1084
Purine_Utilization	Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)	fig|6666666.229869.peg.1083
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.229869.peg.416
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229869.peg.901
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229869.peg.2265
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229869.peg.109
Purine_conversions	Adenosine deaminase (EC 3.5.4.4)	fig|6666666.229869.peg.1581
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229869.peg.669
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229869.peg.279
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229869.peg.2756
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229869.peg.2756
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229869.peg.243
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229869.peg.1876
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229869.peg.1425
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229869.peg.756
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229869.peg.2436
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229869.peg.2756
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229869.peg.2756
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229869.peg.1876
Putative_TldE-TldD_proteolytic_complex	TldD family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229869.peg.2128
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229869.peg.463
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229869.peg.480
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229869.peg.481
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229869.peg.462
Putative_TldE-TldD_proteolytic_complex	TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229869.peg.2129
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229869.peg.1096
Pyrimidine_utilization	Uracil permease	fig|6666666.229869.peg.2270
Pyrroloquinoline_Quinone_biosynthesis	Microsomal dipeptidase (EC 3.4.13.19)	fig|6666666.229869.peg.2118
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229869.peg.1145
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229869.peg.2321
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.229869.peg.687
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229869.peg.272
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229869.peg.271
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Malate Na(+) symporter	fig|6666666.229869.peg.1843
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229869.peg.2078
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229869.peg.78
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229869.peg.1999
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229869.peg.277
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229869.peg.975
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229869.peg.838
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.229869.peg.1015
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229869.peg.2015
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229869.peg.1129
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229869.peg.2255
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229869.peg.1725
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.229869.peg.2140
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229869.peg.1133
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229869.peg.1579
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229869.peg.2051
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229869.peg.2318
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229869.peg.2603
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229869.peg.971
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229869.peg.2073
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229869.peg.1449
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229869.peg.152
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229869.peg.153
RNA_3'-terminal_phosphate_cyclase	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229869.peg.1008
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229869.peg.2605
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)	fig|6666666.229869.peg.2581
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229869.peg.338
RNA_methylation	LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM	fig|6666666.229869.peg.1992
RNA_methylation	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229869.peg.2528
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229869.peg.2428
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229869.peg.2610
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229869.peg.701
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229869.peg.2014
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229869.peg.889
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229869.peg.651
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229869.peg.1718
RNA_methylation	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229869.peg.1919
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229869.peg.1114
RNA_methylation	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229869.peg.2419
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229869.peg.1146
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229869.peg.1280
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229869.peg.1281
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229869.peg.2331
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229869.peg.2338
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229869.peg.2014
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229869.peg.990
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229869.peg.2338
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229869.peg.345
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229869.peg.2137
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229869.peg.2134
RNA_modification_cluster	Protein YidD	fig|6666666.229869.peg.2136
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229869.peg.2135
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229869.peg.1021
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229869.peg.2102
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229869.peg.2103
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229869.peg.299
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229869.peg.747
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229869.peg.896
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229869.peg.392
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229869.peg.699
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229869.peg.1960
RNA_pseudouridine_syntheses	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229869.peg.960
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229869.peg.2323
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229869.peg.2257
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229869.peg.678
Rad50-Mre11_DNA_repair_cluster	Bipolar DNA helicase HerA	fig|6666666.229869.peg.853
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcC	fig|6666666.229869.peg.1598
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcD	fig|6666666.229869.peg.1599
Rad50-Mre11_DNA_repair_cluster	FIG036446: hypothetical protein	fig|6666666.229869.peg.854
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229869.peg.2293
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229869.peg.1399
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229869.peg.2760
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229869.peg.290
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229869.peg.1129
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229869.peg.2255
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229869.peg.1595
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229869.peg.1461
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229869.peg.1767
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229869.peg.2393
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229869.peg.2276
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229869.peg.1633
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229869.peg.1897
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229869.peg.856
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229869.peg.1066
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229869.peg.1805
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229869.peg.1056
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229869.peg.1804
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1060
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1061
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1062
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1065
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1807
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1808
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1810
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229869.peg.1668
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229869.peg.341
Rhamnose_containing_glycans	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229869.peg.362
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229869.peg.342
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229869.peg.2681
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.229869.peg.1092
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.229869.peg.358
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229869.peg.340
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229869.peg.740
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229869.peg.1695
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229869.peg.740
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229869.peg.1695
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229869.peg.291
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229869.peg.740
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229869.peg.1695
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.77
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.93
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.186
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.723
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.1002
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.1274
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229869.peg.1463
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229869.peg.740
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229869.peg.1695
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229869.peg.678
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229869.peg.1967
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229869.peg.241
Ribonucleases_in_Bacillus	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229869.peg.337
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229869.peg.241
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229869.peg.2626
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229869.peg.444
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229869.peg.85
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229869.peg.91
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.229869.peg.445
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229869.peg.1928
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229869.peg.731
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229869.peg.1027
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.229869.peg.1045
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.229869.peg.1022
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.229869.peg.731
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.229869.peg.1023
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.229869.peg.1031
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-dependent	fig|6666666.229869.peg.1031
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.229869.peg.739
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.229869.peg.892
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.229869.peg.1035
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.229869.peg.117
Ribosome_SSU_bacterial	SSU ribosomal protein S18p, zinc-dependent	fig|6666666.229869.peg.117
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.229869.peg.1040
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.229869.peg.2422
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.229869.peg.2764
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.229869.peg.2050
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.229869.peg.2183
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.229869.peg.1038
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.229869.peg.2549
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.229869.peg.1027
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.229869.peg.115
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.229869.peg.730
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.229869.peg.1030
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.229869.peg.967
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229869.peg.890
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229869.peg.392
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229869.peg.699
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229869.peg.1960
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229869.peg.701
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229869.peg.2323
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229869.peg.308
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229869.peg.889
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229869.peg.2385
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229869.peg.2185
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229869.peg.2183
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229869.peg.2184
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229869.peg.2418
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229869.peg.1011
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229869.peg.1128
Rubrerythrin	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229869.peg.1757
Rubrerythrin	Rubredoxin	fig|6666666.229869.peg.726
Rubrerythrin	Rubrerythrin	fig|6666666.229869.peg.1453
Rubrerythrin	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229869.peg.2680
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.229869.peg.2618
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229869.peg.291
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229869.peg.2619
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229869.peg.2580
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.229869.peg.2045
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229869.peg.2064
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229869.peg.2065
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.229869.peg.2533
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229869.peg.1073
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229869.peg.1075
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229869.peg.1688
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229869.peg.1690
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229869.peg.2065
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229869.peg.2390
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229869.peg.2392
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229869.peg.780
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.229869.peg.825
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229869.peg.1749
Serine-glyoxylate_cycle	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229869.peg.1721
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229869.peg.258
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229869.peg.259
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.70
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.349
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.457
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.837
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1367
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1560
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1669
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.1995
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2043
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2302
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229869.peg.2672
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229869.peg.1755
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229869.peg.1755
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229869.peg.1874
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229869.peg.174
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229869.peg.2521
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229869.peg.2521
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229869.peg.1874
Serine_endopeptidase_(EC_3.4.21.-)	Prolyl endopeptidase (EC 3.4.21.26)	fig|6666666.229869.peg.628
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229869.peg.2568
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Hypothetical similar to thiamin biosynthesis lipoprotein ApbE	fig|6666666.229869.peg.1924
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229869.peg.1923
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.34
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.39
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.507
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.710
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.1795
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.1911
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229869.peg.2451
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229869.peg.659
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229869.peg.1231
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229869.peg.2420
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.229869.peg.1857
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229869.peg.658
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229869.peg.1232
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229869.peg.1233
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229869.peg.658
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229869.peg.660
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229869.peg.1923
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229869.peg.311
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229869.peg.459
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229869.peg.2301
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229869.peg.1220
Sporulation-associated_proteins_with_broader_functions	Protein of unknown function identified by role in sporulation (SpoVG)	fig|6666666.229869.peg.437
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229869.peg.648
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229869.peg.117
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229869.peg.312
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.229869.peg.1143
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229869.peg.2237
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229869.peg.2238
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229869.peg.315
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229869.peg.624
Stationary_phase_repair_cluster	FIG139438: lipoprotein B	fig|6666666.229869.peg.378
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229869.peg.1646
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, periplasmic component	fig|6666666.229869.peg.753
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229869.peg.2238
Teichoic_and_lipoteichoic_acids_biosynthesis	N-acetylmannosaminyltransferase (EC 2.4.1.187)	fig|6666666.229869.peg.2611
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229869.peg.362
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid translocation permease protein TagG	fig|6666666.229869.peg.363
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229869.peg.1872
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1483
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1505
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1507
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1532
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1553
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1740
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1914
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.2490
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229869.peg.461
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229869.peg.1571
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229869.peg.1913
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229869.peg.2491
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1483
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1505
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1507
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1532
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1553
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1740
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.1914
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229869.peg.2490
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229869.peg.461
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229869.peg.1571
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229869.peg.1913
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229869.peg.2491
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229869.peg.729
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229869.peg.1470
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229869.peg.729
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229869.peg.1470
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229869.peg.2583
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229869.peg.1624
Thiamin_biosynthesis	Thiamin ABC transporter, substrate-binding component	fig|6666666.229869.peg.1626
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229869.peg.877
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229869.peg.879
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229869.peg.1625
Thiamin_biosynthesis	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229869.peg.1969
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229869.peg.1077
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229869.peg.838
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229869.peg.1725
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229869.peg.124
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229869.peg.2121
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229869.peg.1866
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229869.peg.2326
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229869.peg.2133
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.229869.peg.2296
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229869.peg.106
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229869.peg.252
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229869.peg.1555
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229869.peg.1724
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229869.peg.1844
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229869.peg.159
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229869.peg.1198
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229869.peg.1377
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229869.peg.1457
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229869.peg.145
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229869.peg.1544
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229869.peg.1687
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229869.peg.2079
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229869.peg.1543
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229869.peg.2517
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229869.peg.2559
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229869.peg.2518
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229869.peg.2560
Toxin-antitoxin_replicon_stabilization_systems	VapB protein (antitoxin to VapC)	fig|6666666.229869.peg.2383
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229869.peg.1201
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229869.peg.2382
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229869.peg.1378
Toxin-antitoxin_replicon_stabilization_systems	YafQ toxin protein	fig|6666666.229869.peg.1456
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229869.peg.1961
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229869.peg.2538
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229869.peg.1199
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229869.peg.674
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229869.peg.761
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229869.peg.1093
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229869.peg.2097
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229869.peg.1848
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229869.peg.275
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229869.peg.675
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229869.peg.136
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229869.peg.491
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229869.peg.429
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229869.peg.834
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229869.peg.1698
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoE	fig|6666666.229869.peg.1675
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.229869.peg.1857
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.229869.peg.2130
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229869.peg.729
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229869.peg.1470
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.229869.peg.826
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.229869.peg.806
Translation_elongation_factor_P_lysylation	Translation elongation factor P Lys34:lysine transferase	fig|6666666.229869.peg.2250
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229869.peg.729
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229869.peg.1470
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.229869.peg.826
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.229869.peg.2596
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.229869.peg.806
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.229869.peg.2184
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229869.peg.1046
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229869.peg.148
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229869.peg.677
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229869.peg.2416
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229869.peg.676
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229869.peg.2358
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229869.peg.2740
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229869.peg.2034
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229869.peg.2455
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229869.peg.147
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229869.peg.1220
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229869.peg.2035
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229869.peg.2185
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229869.peg.312
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229869.peg.2377
Transport_of_Nickel_and_Cobalt	Additional component NikL of nickel ECF transporter	fig|6666666.229869.peg.2379
Transport_of_Nickel_and_Cobalt	Additional periplasmic component NikK of nickel ECF transporter	fig|6666666.229869.peg.2441
Transport_of_Nickel_and_Cobalt	Predicted cobalt ABC transporter periplasmic component	fig|6666666.229869.peg.2443
Transport_of_Nickel_and_Cobalt	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229869.peg.2378
Transport_of_Nickel_and_Cobalt	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229869.peg.2376
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229869.peg.452
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229869.peg.1259
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229869.peg.1260
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229869.peg.1678
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229869.peg.1666
Trehalose_Uptake_and_Utilization	Trehalase (EC 3.2.1.28)	fig|6666666.229869.peg.776
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229869.peg.60
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229869.peg.2368
Triacylglycerol_metabolism	Lysophospholipase L2 (EC 3.1.1.5)	fig|6666666.229869.peg.68
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229869.peg.60
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229869.peg.2368
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229869.peg.284
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229869.peg.2526
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229869.peg.198
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229869.peg.286
Two-component_regulatory_systems_in_Campylobacter	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229869.peg.287
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.229869.peg.1756
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229869.peg.856
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229869.peg.1066
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229869.peg.1805
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229869.peg.1056
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229869.peg.1804
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1060
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1061
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1062
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1065
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1807
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1808
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229869.peg.1810
Type_VI_secretion_systems	ClpB protein	fig|6666666.229869.peg.2200
Type_VI_secretion_systems	ClpB protein	fig|6666666.229869.peg.2465
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229869.peg.908
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229869.peg.1673
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229869.peg.1222
USS-DB-7	ClpB protein	fig|6666666.229869.peg.2200
USS-DB-7	ClpB protein	fig|6666666.229869.peg.2465
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229869.peg.1266
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229869.peg.1683
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229869.peg.1962
Universal_GTPases	GTP-binding protein Era	fig|6666666.229869.peg.2594
Universal_GTPases	GTP-binding protein HflX	fig|6666666.229869.peg.1800
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229869.peg.2431
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229869.peg.2685
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229869.peg.2338
Universal_GTPases	Probable GTPase related to EngC	fig|6666666.229869.peg.1816
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229869.peg.332
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229869.peg.2458
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229869.peg.2414
Universal_GTPases	Translation elongation factor G	fig|6666666.229869.peg.729
Universal_GTPases	Translation elongation factor G	fig|6666666.229869.peg.1470
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229869.peg.2596
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229869.peg.1046
Universal_GTPases	Translation initiation factor 2	fig|6666666.229869.peg.676
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229869.peg.1096
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229869.peg.86
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229869.peg.180
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 4	fig|6666666.229869.peg.2032
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229869.peg.1821
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229869.peg.808
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229869.peg.1814
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229869.peg.2471
Yfa_cluster	Competence/damage-inducible protein CinA	fig|6666666.229869.peg.2768
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229869.peg.308
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229869.peg.2022
YjeE	NAD(P)HX dehydratase	fig|6666666.229869.peg.407
YjeE	NAD(P)HX epimerase	fig|6666666.229869.peg.407
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229869.peg.308
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229869.peg.307
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229869.peg.1944
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229869.peg.2423
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229869.peg.2527
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229869.peg.121
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229869.peg.2143
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229869.peg.109
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229869.peg.4
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229869.peg.12
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229869.peg.839
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229869.peg.1563
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229869.peg.1616
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229869.peg.2511
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.229869.peg.292
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229869.peg.620
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229869.peg.621
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229869.peg.622
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229869.peg.619
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229869.peg.2146
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229869.peg.697
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229869.peg.620
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229869.peg.621
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229869.peg.619
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229869.peg.2523
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229869.peg.341
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.229869.peg.358
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229869.peg.340
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.1125
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.1664
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.2066
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229869.peg.2449
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229869.peg.2338
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229869.peg.990
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229869.peg.829
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229869.peg.2732
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229869.peg.901
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229869.peg.2265
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.229869.peg.1851
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229869.peg.2563
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229869.peg.695
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229869.peg.2422
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229869.peg.1425
pyrimidine_conversions	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229869.peg.2327
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229869.peg.1077
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229869.peg.1938
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.229869.peg.2240
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229869.peg.740
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229869.peg.1695
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229869.peg.740
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229869.peg.1695
tRNA-dependent_amino_acid_transfers	tRNA-dependent lipid II--amino acid ligase	fig|6666666.229869.peg.2735
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229869.peg.134
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229869.peg.803
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229869.peg.795
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229869.peg.201
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.229869.peg.1305
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.229869.peg.1306
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.229869.peg.1304
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229869.peg.1674
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229869.peg.1564
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.229869.peg.1305
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.229869.peg.1306
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.229869.peg.1304
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.229869.peg.1564
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229869.peg.1748
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229869.peg.339
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229869.peg.1877
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229869.peg.2191
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229869.peg.1983
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229869.peg.718
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229869.peg.1658
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229869.peg.2567
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.229869.peg.2300
tRNA_aminoacylation,_Pro	tRNA proofreading protein STM4549	fig|6666666.229869.peg.2162
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229869.peg.2222
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229869.peg.692
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229869.peg.200
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229869.peg.959
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229869.peg.413
tRNA_modification_Bacteria	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229869.peg.1920
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.1125
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.1664
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229869.peg.2066
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229869.peg.2449
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229869.peg.2563
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229869.peg.245
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.229869.peg.428
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.229869.peg.1137
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229869.peg.2338
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.229869.peg.1144
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.229869.peg.1143
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.229869.peg.1142
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229869.peg.2073
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229869.peg.2064
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229869.peg.2065
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229869.peg.889
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229869.peg.651
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229869.peg.1718
tRNA_modification_Bacteria	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229869.peg.1919
tRNA_modification_Bacteria	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229869.peg.1969
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229869.peg.1645
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229869.peg.1813
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229869.peg.334
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229869.peg.1711
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229869.peg.2257
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229869.peg.678
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229869.peg.990
tRNA_modification_Bacteria	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229869.peg.1433
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229869.peg.435
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229869.peg.1449
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229869.peg.213
tRNA_modification_Bacteria	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229869.peg.2419
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229869.peg.743
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229869.peg.2135
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.229869.peg.2541
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229869.peg.334
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229869.peg.1711
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229869.peg.2257
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229869.peg.678
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229869.peg.435
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229869.peg.213
tRNA_splicing	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229869.peg.1008
tRNAs	tRNA-Ala-CGC	fig|6666666.229869.rna.16
tRNAs	tRNA-Ala-GGC	fig|6666666.229869.rna.28
tRNAs	tRNA-Arg-GCG	fig|6666666.229869.rna.22
tRNAs	tRNA-Cys-GCA	fig|6666666.229869.rna.25
tRNAs	tRNA-Gly-GCC	fig|6666666.229869.rna.1
tRNAs	tRNA-Leu-CAA	fig|6666666.229869.rna.30
tRNAs	tRNA-Leu-CAG	fig|6666666.229869.rna.15
tRNAs	tRNA-Leu-GAG	fig|6666666.229869.rna.47
tRNAs	tRNA-Phe-GAA	fig|6666666.229869.rna.48
tRNAs	tRNA-Pro-CGG	fig|6666666.229869.rna.32
tRNAs	tRNA-Pro-GGG	fig|6666666.229869.rna.46
tRNAs	tRNA-Ser-GGA	fig|6666666.229869.rna.24
tRNAs	tRNA-Trp-CCA	fig|6666666.229869.rna.35
tRNAs	tRNA-Val-GAC	fig|6666666.229869.rna.45
