16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229871.peg.303
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229871.peg.2674
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein MraZ	fig|6666666.229871.peg.2672
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229871.peg.340
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229871.peg.2673
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229871.peg.1739
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229871.peg.1466
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229871.peg.2480
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229871.peg.1601
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229871.peg.57
5-FCL-like_protein	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229871.peg.1556
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229871.peg.1597
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229871.peg.1842
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229871.peg.1550
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229871.peg.625
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229871.peg.626
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229871.peg.1420
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)	fig|6666666.229871.peg.2418
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)	fig|6666666.229871.peg.2416
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1)	fig|6666666.229871.peg.2417
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.229871.peg.344
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)	fig|6666666.229871.peg.1119
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)	fig|6666666.229871.peg.1121
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)	fig|6666666.229871.peg.1122
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)	fig|6666666.229871.peg.1123
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)	fig|6666666.229871.peg.1648
ABC_transporter_branched-chain_amino_acid_(TC_3.A.1.4.1)	High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)	fig|6666666.229871.peg.1124
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	fig|6666666.229871.peg.1936
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)	fig|6666666.229871.peg.2593
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	fig|6666666.229871.peg.1934
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229871.peg.251
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	fig|6666666.229871.peg.2471
ABC_transporter_dipeptide_(TC_3.A.1.5.2)	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.229871.peg.1178
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229871.peg.250
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229871.peg.770
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229871.peg.1496
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229871.peg.2588
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229871.peg.249
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	fig|6666666.229871.peg.2585
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229871.peg.248
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229871.peg.1179
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229871.peg.1937
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229871.peg.2154
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229871.peg.2314
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229871.peg.2475
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	fig|6666666.229871.peg.2584
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229871.peg.252
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229871.peg.1181
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229871.peg.2155
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229871.peg.2157
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229871.peg.2470
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229871.peg.2474
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229871.peg.2587
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	fig|6666666.229871.peg.2590
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229871.peg.1180
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229871.peg.2156
ABC_transporter_oligopeptide_(TC_3.A.1.5.1)	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	fig|6666666.229871.peg.2586
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229871.peg.326
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229871.peg.1245
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229871.peg.1244
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229871.peg.1472
Adenosyl_nucleosidases	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229871.peg.1645
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229871.peg.1987
Adenosyl_nucleosidases	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229871.peg.1645
Adhesion_of_Campylobacter	Fibronectin/fibrinogen-binding protein	fig|6666666.229871.peg.18
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.229871.peg.228
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.229871.peg.229
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.229871.peg.1862
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.229871.peg.226
Alanine_biosynthesis	Alanine racemase (EC 5.1.1.1)	fig|6666666.229871.peg.2613
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.1216
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.1643
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.2204
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229871.peg.827
Alkanesulfonates_Utilization	Alkanesulfonates ABC transporter ATP-binding protein	fig|6666666.229871.peg.1395
Allantoin_Utilization	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229871.peg.2487
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.194
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.304
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.429
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.984
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1235
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1294
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1638
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1747
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2000
Allantoin_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2052
Alpha-Amylase_locus_in_Streptocococcus	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229871.peg.1777
Aminoglycoside_adenylyltransferases	Aminoglycoside N6'-acetyltransferase (EC 2.3.1.82)	fig|6666666.229871.peg.932
Aminopeptidases_(EC_3.4.11.-)	Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.24)	fig|6666666.229871.peg.1095
Aminopeptidases_(EC_3.4.11.-)	Cytosol aminopeptidase PepA (EC 3.4.11.1)	fig|6666666.229871.peg.1843
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229871.peg.482
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229871.peg.1222
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229871.peg.2127
Ammonia_assimilation	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229871.peg.1946
Ammonia_assimilation	Nitrogen regulatory protein P-II	fig|6666666.229871.peg.1865
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229871.peg.527
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229871.peg.527
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229871.peg.2419
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229871.peg.2419
Arginine_Deiminase_Pathway	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229871.peg.1976
Arginine_Deiminase_Pathway	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229871.peg.1230
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229871.peg.2419
Arginine_and_Ornithine_Degradation	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229871.peg.2628
Arginine_and_Ornithine_Degradation	Arginine deiminase (EC 3.5.3.6)	fig|6666666.229871.peg.1976
Arginine_and_Ornithine_Degradation	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229871.peg.1230
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229871.peg.2485
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229871.peg.2419
Arginine_and_Ornithine_Degradation	Ornithine cyclodeaminase (EC 4.3.1.12)	fig|6666666.229871.peg.1495
Arginine_and_Ornithine_Degradation	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229871.peg.2628
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229871.peg.1806
Aromatic_amino_acid_degradation	Tryptophanase (EC 4.1.99.1)	fig|6666666.229871.peg.2636
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229871.peg.463
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229871.peg.2678
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229871.peg.317
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229871.peg.1802
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229871.peg.1993
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229871.peg.303
Bacterial_Cell_Division	Cell division protein FtsJ	fig|6666666.229871.peg.693
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229871.peg.1360
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229871.peg.1714
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229871.peg.2674
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229871.peg.2677
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229871.peg.2676
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229871.peg.513
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229871.peg.1039
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229871.peg.2679
Bacterial_Cell_Division	Cell division protein MraZ	fig|6666666.229871.peg.2672
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229871.peg.105
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229871.peg.813
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229871.peg.2131
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229871.peg.624
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229871.peg.337
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229871.peg.338
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229871.peg.339
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.229871.peg.1106
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229871.peg.763
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229871.peg.2673
Bacterial_Chemotaxis	Chemotaxis protein CheX	fig|6666666.229871.peg.493
Bacterial_Chemotaxis	Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)	fig|6666666.229871.peg.2165
Bacterial_Chemotaxis	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229871.peg.494
Bacterial_Chemotaxis	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229871.peg.695
Bacterial_Chemotaxis	Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61)	fig|6666666.229871.peg.2166
Bacterial_Chemotaxis	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	fig|6666666.229871.peg.1178
Bacterial_Chemotaxis	Flagellar motor switch protein FliG	fig|6666666.229871.peg.269
Bacterial_Chemotaxis	Flagellar motor switch protein FliG	fig|6666666.229871.peg.2691
Bacterial_Chemotaxis	Flagellar motor switch protein FliM	fig|6666666.229871.peg.1512
Bacterial_Chemotaxis	Flagellar motor switch protein FliN	fig|6666666.229871.peg.1511
Bacterial_Chemotaxis	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229871.peg.1777
Bacterial_Chemotaxis	Positive regulator of CheA protein activity (CheW)	fig|6666666.229871.peg.26
Bacterial_Chemotaxis	Positive regulator of CheA protein activity (CheW)	fig|6666666.229871.peg.492
Bacterial_Chemotaxis	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229871.peg.491
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229871.peg.463
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229871.peg.2678
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229871.peg.303
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229871.peg.1360
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229871.peg.1714
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229871.peg.2674
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229871.peg.2677
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229871.peg.2676
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229871.peg.2679
Bacterial_Cytoskeleton	Cell division protein MraZ	fig|6666666.229871.peg.2672
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229871.peg.813
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229871.peg.2131
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229871.peg.812
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229871.peg.953
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229871.peg.2130
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229871.peg.337
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229871.peg.338
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229871.peg.339
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229871.peg.341
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.229871.peg.1106
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229871.peg.1360
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229871.peg.1714
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229871.peg.446
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229871.peg.80
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229871.peg.2526
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1630
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1840
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1854
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229871.peg.470
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229871.peg.1263
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.229871.peg.2465
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229871.peg.340
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.229871.peg.337
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.229871.peg.338
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.229871.peg.339
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.229871.peg.341
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.229871.peg.1106
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.229871.peg.635
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.229871.peg.635
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229871.peg.2359
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229871.peg.634
Bacterial_checkpoint-control-related_cluster	Uncharacterized secreted protein associated with spyDAC	fig|6666666.229871.peg.1524
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229871.peg.849
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229871.peg.1334
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229871.peg.1474
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229871.peg.1475
Bacterial_hemoglobins	diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	fig|6666666.229871.peg.1673
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229871.peg.763
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229871.peg.862
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229871.peg.1205
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.229871.peg.868
Beta-lactamase	Metal-dependent hydrolases of the beta-lactamase superfamily I	fig|6666666.229871.peg.531
Bile_hydrolysis	Choloylglycine hydrolase (EC 3.5.1.24)	fig|6666666.229871.peg.2033
Biofilm_formation_in_Staphylococcus	RNA polymerase sigma factor SigB	fig|6666666.229871.peg.1437
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229871.peg.84
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229871.peg.301
Biotin_biosynthesis	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229871.peg.1476
Biotin_biosynthesis	Biotin operon repressor	fig|6666666.229871.peg.1580
Biotin_biosynthesis	Biotin synthesis protein BioC	fig|6666666.229871.peg.407
Biotin_biosynthesis	Biotin-protein ligase (EC 6.3.4.15)	fig|6666666.229871.peg.1580
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229871.peg.175
Biotin_biosynthesis	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229871.peg.2430
Biotin_biosynthesis	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229871.peg.85
Biotin_biosynthesis	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229871.peg.83
Biotin_biosynthesis	predicted biotin regulatory protein BioR (GntR family)	fig|6666666.229871.peg.1678
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.229871.peg.407
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229871.peg.2464
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229871.peg.591
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229871.peg.2520
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229871.peg.479
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229871.peg.2623
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229871.peg.2624
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229871.peg.2622
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229871.peg.181
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229871.peg.845
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229871.peg.184
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229871.peg.182
CBSS-176299.4.peg.1996A	Endoribonuclease L-PSP	fig|6666666.229871.peg.843
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229871.peg.2302
CBSS-176299.4.peg.1996A	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229871.peg.2448
CBSS-196620.1.peg.2477	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229871.peg.371
CBSS-196620.1.peg.2477	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229871.peg.1544
CBSS-196620.1.peg.2477	Ferrous iron transport protein B	fig|6666666.229871.peg.837
CBSS-196620.1.peg.2477	Maltose O-acetyltransferase (EC 2.3.1.79)	fig|6666666.229871.peg.416
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229871.peg.2207
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229871.peg.2206
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229871.peg.2205
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229871.peg.1209
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229871.peg.1962
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229871.peg.1245
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229871.peg.1244
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229871.peg.309
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229871.peg.311
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229871.peg.2499
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229871.peg.2122
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229871.peg.2422
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.229871.peg.773
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.229871.peg.1907
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.229871.peg.1908
CBSS-258594.1.peg.3339	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.229871.peg.486
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229871.peg.613
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229871.peg.362
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229871.peg.613
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229871.peg.362
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229871.peg.2683
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229871.peg.2682
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229871.peg.1625
CBSS-292415.3.peg.2341	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229871.peg.1158
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.185
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.415
CBSS-296591.1.peg.2330	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.441
CBSS-296591.1.peg.2330	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229871.peg.443
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229871.peg.166
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229871.peg.1105
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229871.peg.1104
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229871.peg.858
CBSS-314276.3.peg.1499	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229871.peg.1367
CBSS-314276.3.peg.1499	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229871.peg.2370
CBSS-314276.3.peg.1499	Segregation and condensation protein A	fig|6666666.229871.peg.2368
CBSS-314276.3.peg.1499	Segregation and condensation protein B	fig|6666666.229871.peg.2369
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.229871.peg.54
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229871.peg.1782
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229871.peg.2256
CBSS-316057.3.peg.1308	RNA polymerase sigma-54 factor RpoN	fig|6666666.229871.peg.1159
CBSS-316273.3.peg.227	Alpha-2-macroglobulin	fig|6666666.229871.peg.911
CBSS-316273.3.peg.227	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229871.peg.915
CBSS-316407.3.peg.2816	Protein of unknown function DUF541	fig|6666666.229871.peg.22
CBSS-320388.3.peg.3759	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229871.peg.1645
CBSS-320388.3.peg.3759	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229871.peg.1645
CBSS-323098.3.peg.2823	Flagellar motor rotation protein MotB	fig|6666666.229871.peg.1514
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229871.peg.1063
CBSS-326442.4.peg.1852	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229871.peg.1979
CBSS-331978.3.peg.2915	Preprotein translocase subunit SecG (TC 3.A.5.1.1)	fig|6666666.229871.peg.2713
CBSS-331978.3.peg.2915	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229871.peg.2711
CBSS-342610.3.peg.1536	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229871.peg.1158
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229871.peg.921
CBSS-342610.3.peg.1536	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229871.peg.1321
CBSS-342610.3.peg.1794	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229871.peg.1547
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229871.peg.1010
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229871.peg.333
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229871.peg.334
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229871.peg.1620
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229871.peg.2425
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229871.peg.338
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229871.peg.339
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.229871.peg.1106
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229871.peg.282
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229871.peg.298
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229871.peg.1364
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229871.peg.1093
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229871.peg.1628
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229871.peg.528
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229871.peg.1757
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.1216
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.1643
CBSS-393130.3.peg.794	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.2204
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229871.peg.667
CBSS-393130.3.peg.794	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229871.peg.1319
CBSS-393133.3.peg.2787	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229871.peg.1349
CBSS-469378.4.peg.430	FIG002344: Hydrolase (HAD superfamily)	fig|6666666.229871.peg.1776
CBSS-469378.4.peg.430	RecA protein	fig|6666666.229871.peg.2367
CBSS-521098.4.peg.1460	FIG001614: Membrane protein	fig|6666666.229871.peg.1717
CBSS-521098.4.peg.1460	FIG015373: Membrane protein	fig|6666666.229871.peg.1718
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229871.peg.1863
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229871.peg.1864
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229871.peg.2717
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.229871.peg.2715
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229871.peg.2716
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229871.peg.2714
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229871.peg.2714
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229871.peg.1071
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229871.peg.1100
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229871.peg.242
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229871.peg.303
CBSS-83331.1.peg.3039	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229871.peg.1099
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229871.peg.340
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229871.peg.1102
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.1216
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.1643
CBSS-84588.1.peg.1247	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.2204
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229871.peg.2151
CBSS-84588.1.peg.1247	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229871.peg.2466
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229871.peg.55
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229871.peg.482
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229871.peg.79
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229871.peg.80
CMP-N-acetylneuraminate_Biosynthesis	N-acetylneuraminate synthase (EC 2.5.1.56)	fig|6666666.229871.peg.2451
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.229871.peg.408
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229871.peg.1871
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229871.peg.1872
CRISPRs	CRISPR-associated protein, Csn1 family	fig|6666666.229871.peg.1870
CRISPRs	CRISPR-associated protein, Csn2 family	fig|6666666.229871.peg.1873
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229871.peg.1443
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.432
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.433
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.435
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.438
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.1152
Cadmium_resistance	Cadmium efflux system accessory protein	fig|6666666.229871.peg.370
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229871.peg.414
Carbon_Starvation	Carbon starvation protein A	fig|6666666.229871.peg.1549
Carbon_Starvation	Carbon storage regulator	fig|6666666.229871.peg.1113
Carbon_storage_regulator	Carbon storage regulator	fig|6666666.229871.peg.1113
Carbon_storage_regulator	Flagellar assembly factor FliW	fig|6666666.229871.peg.1112
Carotenoids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229871.peg.527
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229871.peg.1536
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229871.peg.813
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229871.peg.2131
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229871.peg.812
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229871.peg.953
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229871.peg.2130
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229871.peg.1841
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229871.peg.1537
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229871.peg.1770
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229871.peg.1769
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229871.peg.946
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.432
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.433
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.435
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.438
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.1152
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229871.peg.1155
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229871.peg.1153
Cell_Division_Subsystem_including_YidCD	RNA-binding protein Jag	fig|6666666.229871.peg.1151
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229871.peg.1154
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229871.peg.1270
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229871.peg.2323
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229871.peg.463
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229871.peg.317
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229871.peg.1802
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229871.peg.1993
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229871.peg.535
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229871.peg.2161
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229871.peg.555
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229871.peg.854
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229871.peg.2499
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229871.peg.271
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229871.peg.329
Cell_envelope-associated_LytR-CpsA-Psr_transcriptional_attenuators	Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily S (as in PMID19099556)	fig|6666666.229871.peg.179
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229871.peg.1561
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229871.peg.2696
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229871.peg.1880
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)	fig|6666666.229871.peg.1792
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Sarcosine oxidase alpha subunit (EC 1.5.3.1)	fig|6666666.229871.peg.1393
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Sarcosine oxidase alpha subunit (EC 1.5.3.1)	fig|6666666.229871.peg.1680
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229871.peg.1320
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229871.peg.74
Chorismate_Synthesis	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229871.peg.75
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229871.peg.1644
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229871.peg.120
Chorismate_Synthesis	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229871.peg.502
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229871.peg.2650
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229871.peg.74
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229871.peg.75
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229871.peg.1205
Citrate_Metabolism,_Transport,_and_Regulation	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)	fig|6666666.229871.peg.522
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase alpha chain (EC 4.1.3.6)	fig|6666666.229871.peg.65
Citrate_Metabolism,_Transport,_and_Regulation	Citrate lyase beta chain (EC 4.1.3.6)	fig|6666666.229871.peg.66
Citrate_Metabolism,_Transport,_and_Regulation	[Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)	fig|6666666.229871.peg.521
ClpAS_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229871.peg.899
ClpAS_cluster	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229871.peg.898
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229871.peg.93
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229871.peg.533
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229871.peg.74
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229871.peg.75
CoA_disulfide_thiol-disulfide_redox_system	CoA-disulfide reductase (EC 1.8.1.14)	fig|6666666.229871.peg.1695
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.229871.peg.1140
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.229871.peg.1147
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229871.peg.1142
Cobalamin_synthesis	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)	fig|6666666.229871.peg.1749
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229871.peg.2135
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229871.peg.2668
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.229871.peg.1411
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.229871.peg.2140
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.229871.peg.2134
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.229871.peg.32
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.229871.peg.2141
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.229871.peg.1306
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.229871.peg.1082
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.229871.peg.1412
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.229871.peg.1441
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.229871.peg.2375
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.229871.peg.1410
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229871.peg.2152
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229871.peg.1040
Cobalt-zinc-cadmium_resistance	Transcriptional regulator, MerR family	fig|6666666.229871.peg.1624
Coenzyme_A_Biosynthesis	2-dehydropantoate 2-reductase (EC 1.1.1.169)	fig|6666666.229871.peg.1895
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229871.peg.73
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229871.peg.362
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229871.peg.103
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229871.peg.1166
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229871.peg.2540
Colicin_V_and_Bacteriocin_Production_Cluster	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229871.peg.2114
Colicin_V_and_Bacteriocin_Production_Cluster	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229871.peg.1162
Colicin_V_and_Bacteriocin_Production_Cluster	Colicin V production protein	fig|6666666.229871.peg.697
Colicin_V_and_Bacteriocin_Production_Cluster	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229871.peg.2601
Colicin_V_and_Bacteriocin_Production_Cluster	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229871.peg.2601
Colicin_V_and_Bacteriocin_Production_Cluster	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229871.peg.1032
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)	fig|6666666.229871.peg.1320
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229871.peg.74
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229871.peg.75
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229871.peg.1644
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229871.peg.120
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229871.peg.2650
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229871.peg.74
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229871.peg.75
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229871.peg.1205
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229871.peg.2683
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229871.peg.1252
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229871.peg.79
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229871.peg.80
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229871.peg.537
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229871.peg.848
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229871.peg.1347
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229871.peg.2682
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Serine/threonine protein kinase PrkC, regulator of stationary phase	fig|6666666.229871.peg.78
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1630
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1840
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1854
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229871.peg.470
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229871.peg.1263
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229871.peg.1635
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229871.peg.1289
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229871.peg.371
Copper_Transport_System	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229871.peg.1544
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229871.peg.371
Copper_homeostasis	Copper-translocating P-type ATPase (EC 3.6.3.4)	fig|6666666.229871.peg.1544
Copper_homeostasis:_copper_tolerance	Cytoplasmic copper homeostasis protein CutC	fig|6666666.229871.peg.1008
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229871.peg.1863
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229871.peg.1864
Copper_homeostasis:_copper_tolerance	Magnesium and cobalt efflux protein CorC	fig|6666666.229871.peg.2717
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229871.peg.1699
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229871.peg.1699
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229871.peg.2487
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	D-glycerate transporter (predicted)	fig|6666666.229871.peg.1746
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.194
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.304
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.429
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.984
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1235
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1294
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1638
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1747
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2000
D-galactarate,_D-glucarate_and_D-glycerate_catabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2052
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229871.peg.2487
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	D-glycerate transporter (predicted)	fig|6666666.229871.peg.1746
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.194
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.304
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.429
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.984
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1235
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1294
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1638
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1747
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2000
D-galactarate,_D-glucarate_and_D-glycerate_catabolism_-_gjo	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2052
D-ribose_utilization	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229871.peg.76
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229871.peg.1892
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229871.peg.1649
D-ribose_utilization	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)	fig|6666666.229871.peg.1925
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229871.peg.528
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229871.peg.72
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229871.peg.1289
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229871.peg.956
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229871.peg.1841
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229871.peg.1537
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229871.peg.1338
DNA_processing_cluster	FIG000557: hypothetical protein co-occurring with RecR	fig|6666666.229871.peg.538
DNA_processing_cluster	Protein involved in catabolism of external DNA	fig|6666666.229871.peg.1838
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229871.peg.539
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229871.peg.2497
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229871.peg.357
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229871.peg.1233
DNA_repair,_bacterial	DNA polymerase IV (EC 2.7.7.7)	fig|6666666.229871.peg.2454
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229871.peg.1275
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229871.peg.2465
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229871.peg.290
DNA_repair,_bacterial	DNA-cytosine methyltransferase (EC 2.1.1.37)	fig|6666666.229871.peg.808
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229871.peg.10
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229871.peg.69
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229871.peg.1274
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229871.peg.2002
DNA_repair,_bacterial	DNA-damage-inducible protein J	fig|6666666.229871.peg.2038
DNA_repair,_bacterial	Exodeoxyribonuclease III (EC 3.1.11.2)	fig|6666666.229871.peg.167
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229871.peg.2504
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229871.peg.840
DNA_repair,_bacterial	Exonuclease SbcC	fig|6666666.229871.peg.1712
DNA_repair,_bacterial	Exonuclease SbcD	fig|6666666.229871.peg.1711
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229871.peg.46
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229871.peg.1757
DNA_repair,_bacterial	RecA protein	fig|6666666.229871.peg.2367
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229871.peg.111
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229871.peg.814
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229871.peg.2209
DNA_repair,_bacterial_DinG_and_relatives	DinG family ATP-dependent helicase YoaA	fig|6666666.229871.peg.714
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229871.peg.841
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229871.peg.1353
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.229871.peg.452
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229871.peg.1869
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecS (RecQ family)	fig|6666666.229871.peg.1959
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229871.peg.1769
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229871.peg.1960
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.229871.peg.2367
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229871.peg.539
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229871.peg.111
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229871.peg.814
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229871.peg.2209
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229871.peg.956
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.229871.peg.2367
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase Rep	fig|6666666.229871.peg.2399
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229871.peg.1093
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229871.peg.1628
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229871.peg.1353
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.229871.peg.2367
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229871.peg.537
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229871.peg.1536
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229871.peg.1841
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229871.peg.1537
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229871.peg.1770
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229871.peg.1769
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.229871.peg.496
DNA_structural_proteins,_bacterial	Chromosome partition protein smc	fig|6666666.229871.peg.1009
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.229871.peg.145
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229871.peg.2683
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229871.peg.1841
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229871.peg.1537
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229871.peg.891
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229871.peg.1010
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229871.peg.499
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229871.peg.1162
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.229871.peg.625
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.229871.peg.244
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.229871.peg.2212
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.229871.peg.2211
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229871.peg.625
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.229871.peg.243
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.229871.peg.390
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.229871.peg.259
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229871.peg.626
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229871.peg.1472
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.229871.peg.1674
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.229871.peg.1674
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.229871.peg.880
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.229871.peg.2469
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.229871.peg.2469
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229871.peg.2488
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229871.peg.883
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229871.peg.1016
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229871.peg.1973
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229871.peg.1987
Deoxyribose_and_Deoxynucleoside_Catabolism	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229871.peg.957
Dihydroxyacetone_kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), ADP-binding subunit	fig|6666666.229871.peg.1117
Dihydroxyacetone_kinases	Putative dihydroxyacetone kinase (EC 2.7.1.29), dihydroxyacetone binding subunit	fig|6666666.229871.peg.1118
Dipeptidases_(EC_3.4.13.-)	Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21)	fig|6666666.229871.peg.1894
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229871.peg.992
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229871.peg.84
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229871.peg.301
ECF_class_transporters	ATPase component BioM of energizing module of biotin ECF transporter	fig|6666666.229871.peg.1476
ECF_class_transporters	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229871.peg.907
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.33
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.930
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.1377
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.1791
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.1795
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.1811
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.1829
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.2396
ECF_class_transporters	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.2401
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229871.peg.35
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229871.peg.931
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229871.peg.1379
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229871.peg.1785
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229871.peg.1789
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229871.peg.1793
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229871.peg.1813
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229871.peg.1831
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229871.peg.2394
ECF_class_transporters	Substrate-specific component BL0695 of predicted ECF transporter	fig|6666666.229871.peg.2402
ECF_class_transporters	Substrate-specific component BioY of biotin ECF transporter	fig|6666666.229871.peg.85
ECF_class_transporters	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229871.peg.906
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.34
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.260
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.929
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.1215
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.1378
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.1790
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.1794
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.1812
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.1830
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.2395
ECF_class_transporters	Transmembrane component BL0694 of energizing module of predicted ECF transporter	fig|6666666.229871.peg.2400
ECF_class_transporters	Transmembrane component BioN of energizing module of biotin ECF transporter	fig|6666666.229871.peg.83
ECF_class_transporters	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229871.peg.908
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229871.peg.1699
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229871.peg.1699
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229871.peg.2439
Entner-Doudoroff_Pathway	Hexokinase (EC 2.7.1.1)	fig|6666666.229871.peg.1224
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229871.peg.488
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229871.peg.151
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229871.peg.130
Entner-Doudoroff_Pathway	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229871.peg.1355
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229871.peg.1290
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229871.peg.2422
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229871.peg.1581
Extracellular_Polysaccharide_Biosynthesis_of_Streptococci	Polysaccharide biosynthesis protein CpsM(V)	fig|6666666.229871.peg.439
Fatty_Acid_Biosynthesis_FASII	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229871.peg.2320
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229871.peg.2122
Fatty_Acid_Biosynthesis_FASII	3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41)	fig|6666666.229871.peg.2126
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2)	fig|6666666.229871.peg.2113
Fatty_Acid_Biosynthesis_FASII	Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2)	fig|6666666.229871.peg.2114
Fatty_Acid_Biosynthesis_FASII	Acyl carrier protein	fig|6666666.229871.peg.2513
Fatty_Acid_Biosynthesis_FASII	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	fig|6666666.229871.peg.2116
Fatty_Acid_Biosynthesis_FASII	Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)	fig|6666666.229871.peg.2115
Fatty_Acid_Biosynthesis_FASII	Holo-[acyl-carrier protein] synthase (EC 2.7.8.7)	fig|6666666.229871.peg.633
Fatty_Acid_Biosynthesis_FASII	Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)	fig|6666666.229871.peg.2125
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229871.peg.2422
Fermentations:_Lactate	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229871.peg.1891
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229871.peg.1581
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229871.peg.2422
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229871.peg.1601
Fermentations:_Mixed_acid	Formate efflux transporter (TC 2.A.44 family)	fig|6666666.229871.peg.2486
Fermentations:_Mixed_acid	L-lactate dehydrogenase (EC 1.1.1.27)	fig|6666666.229871.peg.1891
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229871.peg.1581
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229871.peg.494
Flagellar_motility	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229871.peg.695
Flagellar_motility	Flagellar basal-body rod modification protein FlgD	fig|6666666.229871.peg.1518
Flagellar_motility	Flagellar biosynthesis protein FlhA	fig|6666666.229871.peg.1605
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229871.peg.1058
Flagellar_motility	Flagellar biosynthesis protein FlhB	fig|6666666.229871.peg.1604
Flagellar_motility	Flagellar biosynthesis protein FlhF	fig|6666666.229871.peg.1440
Flagellar_motility	Flagellar biosynthesis protein FliR	fig|6666666.229871.peg.1603
Flagellar_motility	Flagellar motor rotation protein MotA	fig|6666666.229871.peg.1515
Flagellar_motility	Flagellar motor rotation protein MotB	fig|6666666.229871.peg.1514
Flagellar_motility	Flagellar motor switch protein FliM	fig|6666666.229871.peg.1512
Flagellar_motility	Flagellar motor switch protein FliN	fig|6666666.229871.peg.1511
Flagellar_motility	Flagellar synthesis regulator FleN	fig|6666666.229871.peg.1439
Flagellar_motility	Flagellum-specific ATP synthase FliI	fig|6666666.229871.peg.2693
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.229871.peg.1159
Flagellar_motility	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229871.peg.491
Flagellum	Flagellar M-ring protein FliF	fig|6666666.229871.peg.2690
Flagellum	Flagellar assembly protein FliH	fig|6666666.229871.peg.2692
Flagellum	Flagellar basal-body rod modification protein FlgD	fig|6666666.229871.peg.1518
Flagellum	Flagellar basal-body rod protein FlgB	fig|6666666.229871.peg.2687
Flagellum	Flagellar basal-body rod protein FlgC	fig|6666666.229871.peg.2688
Flagellum	Flagellar basal-body rod protein FlgF	fig|6666666.229871.peg.2493
Flagellum	Flagellar basal-body rod protein FlgG	fig|6666666.229871.peg.2494
Flagellum	Flagellar biosynthesis protein FlhA	fig|6666666.229871.peg.1605
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229871.peg.1058
Flagellum	Flagellar biosynthesis protein FlhB	fig|6666666.229871.peg.1604
Flagellum	Flagellar biosynthesis protein FlhF	fig|6666666.229871.peg.1440
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229871.peg.1078
Flagellum	Flagellar biosynthesis protein FliL	fig|6666666.229871.peg.1513
Flagellum	Flagellar biosynthesis protein FliP	fig|6666666.229871.peg.1509
Flagellum	Flagellar biosynthesis protein FliQ	fig|6666666.229871.peg.1602
Flagellum	Flagellar biosynthesis protein FliR	fig|6666666.229871.peg.1603
Flagellum	Flagellar biosynthesis protein FliS	fig|6666666.229871.peg.1664
Flagellum	Flagellar biosynthesis protein FliZ	fig|6666666.229871.peg.1510
Flagellum	Flagellar hook protein FlgE	fig|6666666.229871.peg.1517
Flagellum	Flagellar hook-associated protein FlgK	fig|6666666.229871.peg.1110
Flagellum	Flagellar hook-associated protein FlgL	fig|6666666.229871.peg.1111
Flagellum	Flagellar hook-associated protein FliD	fig|6666666.229871.peg.474
Flagellum	Flagellar hook-basal body complex protein FliE	fig|6666666.229871.peg.2689
Flagellum	Flagellar hook-length control protein FliK	fig|6666666.229871.peg.1519
Flagellum	Flagellar motor rotation protein MotA	fig|6666666.229871.peg.1515
Flagellum	Flagellar motor rotation protein MotB	fig|6666666.229871.peg.1514
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229871.peg.269
Flagellum	Flagellar motor switch protein FliG	fig|6666666.229871.peg.2691
Flagellum	Flagellar motor switch protein FliM	fig|6666666.229871.peg.1512
Flagellum	Flagellar motor switch protein FliN	fig|6666666.229871.peg.1511
Flagellum	Flagellar protein FlbB	fig|6666666.229871.peg.322
Flagellum	Flagellar protein FlbD	fig|6666666.229871.peg.1516
Flagellum	Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)	fig|6666666.229871.peg.2495
Flagellum	Flagellar protein FliJ	fig|6666666.229871.peg.2694
Flagellum	Flagellar synthesis regulator FleN	fig|6666666.229871.peg.1439
Flagellum	Flagellin protein FlaA	fig|6666666.229871.peg.476
Flagellum	Flagellin protein FlaA	fig|6666666.229871.peg.477
Flagellum	Flagellin protein FlaA	fig|6666666.229871.peg.2491
Flagellum	Flagellin protein FlaG	fig|6666666.229871.peg.475
Flagellum	Flagellum-specific ATP synthase FliI	fig|6666666.229871.peg.2693
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229871.peg.334
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229871.peg.1620
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229871.peg.2425
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.229871.peg.1159
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229871.peg.303
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgB	fig|6666666.229871.peg.2687
Flagellum_in_Campylobacter	Flagellar basal-body rod protein FlgC	fig|6666666.229871.peg.2688
Flagellum_in_Campylobacter	Flagellar hook-basal body complex protein FliE	fig|6666666.229871.peg.2689
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229871.peg.476
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229871.peg.477
Flagellum_in_Campylobacter	Flagellin protein FlaA	fig|6666666.229871.peg.2491
Flavodoxin	Flavodoxin	fig|6666666.229871.peg.1704
Flavodoxin	Flavodoxin	fig|6666666.229871.peg.1817
Flavodoxin	Flavodoxin	fig|6666666.229871.peg.2654
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229871.peg.2480
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229871.peg.2601
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229871.peg.2601
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229871.peg.1968
Folate_Biosynthesis	Thymidylate synthase thyX (EC 2.1.1.-)	fig|6666666.229871.peg.1852
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229871.peg.317
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229871.peg.1802
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229871.peg.1993
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229871.peg.535
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229871.peg.329
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229871.peg.31
Formate_hydrogenase	Formate dehydrogenase-O, major subunit (EC 1.2.1.2)	fig|6666666.229871.peg.938
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229871.peg.455
Fructose_utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229871.peg.1626
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229871.peg.649
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229871.peg.937
G3E_family_of_P-loop_GTPases_(metallocenter_biosynthesis)	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229871.peg.936
GMP_synthase	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229871.peg.154
GMP_synthase	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229871.peg.154
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229871.peg.455
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229871.peg.163
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229871.peg.614
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.229871.peg.1994
Glutamate_dehydrogenases	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229871.peg.2485
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229871.peg.2485
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229871.peg.103
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229871.peg.1166
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229871.peg.2540
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229871.peg.717
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229871.peg.450
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229871.peg.1222
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229871.peg.2127
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229871.peg.1946
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NAD-specific glutamate dehydrogenase (EC 1.4.1.2)	fig|6666666.229871.peg.2485
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229871.peg.2485
Glutathione:_Non-redox_reactions	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229871.peg.1158
Glutathione:_Redox_cycle	Glutathione peroxidase (EC 1.11.1.9)	fig|6666666.229871.peg.162
Glycerate_metabolism	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229871.peg.2487
Glycerate_metabolism	D-glycerate transporter (predicted)	fig|6666666.229871.peg.1746
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.194
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.304
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.429
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.984
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1235
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1294
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1638
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1747
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2000
Glycerate_metabolism	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2052
Glycerate_metabolism	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229871.peg.1290
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229871.peg.60
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229871.peg.641
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3)	fig|6666666.229871.peg.1780
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)	fig|6666666.229871.peg.850
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229871.peg.1392
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229871.peg.1679
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229871.peg.863
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229871.peg.2302
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)	fig|6666666.229871.peg.2448
Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization	Probable glycerol transport protein	fig|6666666.229871.peg.2301
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229871.peg.2513
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229871.peg.1601
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229871.peg.1269
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229871.peg.354
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229871.peg.1323
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229871.peg.1421
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.194
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.304
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.429
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.984
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1235
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1294
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1638
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1747
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2000
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2052
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229871.peg.60
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol kinase (EC 2.7.1.30)	fig|6666666.229871.peg.641
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229871.peg.1392
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229871.peg.1679
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229871.peg.863
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229871.peg.1101
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229871.peg.960
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229871.peg.1156
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229871.peg.1420
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229871.peg.960
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229871.peg.55
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229871.peg.51
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229871.peg.63
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.194
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.304
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.429
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.984
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1235
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1294
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1638
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1747
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2000
Glycine_and_Serine_Utilization	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2052
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.229871.peg.54
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229871.peg.53
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229871.peg.52
Glycine_and_Serine_Utilization	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229871.peg.506
Glycine_and_Serine_Utilization	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229871.peg.507
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229871.peg.699
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229871.peg.1420
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229871.peg.1063
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229871.peg.55
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229871.peg.57
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.229871.peg.54
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229871.peg.53
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229871.peg.52
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B alpha subunit (EC 1.21.4.2)	fig|6666666.229871.peg.895
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B beta subunit (EC 1.21.4.2)	fig|6666666.229871.peg.895
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229871.peg.892
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229871.peg.893
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine reductase component B gamma subunit (EC 1.21.4.2)	fig|6666666.229871.peg.894
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 1	fig|6666666.229871.peg.1784
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase component C chain 2	fig|6666666.229871.peg.1783
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229871.peg.2257
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229871.peg.2258
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Glycine/sarcosine/betaine reductase protein A	fig|6666666.229871.peg.2259
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229871.peg.1782
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229871.peg.2256
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229871.peg.2255
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229871.peg.1145
Glycogen_metabolism	Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)	fig|6666666.229871.peg.755
Glycogen_metabolism	Glycogen branching enzyme, GH-57-type, archaeal (EC 2.4.1.18)	fig|6666666.229871.peg.2612
Glycogen_metabolism	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229871.peg.1641
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229871.peg.1170
Glycogen_metabolism	Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)	fig|6666666.229871.peg.21
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229871.peg.1466
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229871.peg.2439
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229871.peg.1883
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.229871.peg.59
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229871.peg.1326
Glycolysis_and_Gluconeogenesis	Hexokinase (EC 2.7.1.1)	fig|6666666.229871.peg.1224
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229871.peg.488
Glycolysis_and_Gluconeogenesis	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229871.peg.1889
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229871.peg.151
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229871.peg.130
Glycolysis_and_Gluconeogenesis	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229871.peg.1355
Glycolysis_and_Gluconeogenesis	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit (EC 2.7.1.90)	fig|6666666.229871.peg.1614
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.229871.peg.540
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229871.peg.1290
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229871.peg.501
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229871.peg.2338
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229871.peg.2711
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229871.peg.1960
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229871.peg.624
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229871.peg.1557
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229871.peg.1863
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229871.peg.1864
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229871.peg.2717
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229871.peg.2716
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229871.peg.2714
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229871.peg.859
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229871.peg.2147
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229871.peg.2146
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229871.peg.2652
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229871.peg.2423
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229871.peg.2145
Group_II_intron-associated_genes	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	fig|6666666.229871.peg.1024
HPr_catabolite_repression_system	Catabolite repression HPr-like protein Crh	fig|6666666.229871.peg.283
HPr_catabolite_repression_system	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229871.peg.284
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229871.peg.859
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229871.peg.2147
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229871.peg.2146
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229871.peg.2145
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type	fig|6666666.229871.peg.468
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.229871.peg.2653
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229871.peg.1029
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229871.peg.608
Heat_shock_dnaK_gene_cluster_extended	Signal peptidase-like protein	fig|6666666.229871.peg.1658
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229871.peg.622
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229871.peg.1739
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229871.peg.617
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229871.peg.466
Hfl_operon	GTP-binding protein HflX	fig|6666666.229871.peg.1491
Hfl_operon	HflC protein	fig|6666666.229871.peg.321
Hfl_operon	HflK protein	fig|6666666.229871.peg.320
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229871.peg.1842
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.229871.peg.2112
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.229871.peg.1598
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.229871.peg.1356
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229871.peg.2527
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229871.peg.1029
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229871.peg.1631
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229871.peg.1853
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1630
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1840
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1854
Hypothetical_protein_HNE_2485	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229871.peg.1304
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229871.peg.892
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229871.peg.894
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229871.peg.1217
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229871.peg.2257
Hypothetical_protein_HNE_2485	selenocysteine-containing	fig|6666666.229871.peg.2259
Inorganic_Sulfur_Assimilation	4Fe-4S ferredoxin, iron-sulfur binding	fig|6666666.229871.peg.169
Integrons	Integron integrase IntIPac	fig|6666666.229871.peg.576
Inteins	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229871.peg.1534
Inteins	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229871.peg.2683
Inteins	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229871.peg.2714
Inteins	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229871.peg.1889
Inteins	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229871.peg.2307
Inteins	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229871.peg.319
Inteins	Translation initiation factor 2	fig|6666666.229871.peg.2624
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, ATP-binding subunit	fig|6666666.229871.peg.515
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, permease protein 2	fig|6666666.229871.peg.514
Iron_transport_system_including_ABC_transporter	Fe2+ ABC transporter, substrate binding protein	fig|6666666.229871.peg.512
Iron_transport_system_including_ABC_transporter	High-affinity Fe2+/Pb2+ permease precursor	fig|6666666.229871.peg.510
Iron_transport_system_including_ABC_transporter	Periplasmic protein p19 involved in high-affinity Fe2+ transport	fig|6666666.229871.peg.511
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229871.peg.527
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229871.peg.1100
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229871.peg.636
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229871.peg.242
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229871.peg.1048
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229871.peg.1047
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229871.peg.326
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229871.peg.2614
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229871.peg.527
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229871.peg.1102
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229871.peg.527
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229871.peg.527
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229871.peg.527
Isoprenoinds_for_Quinones	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229871.peg.650
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229871.peg.1102
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229871.peg.2378
KH_domain_RNA_binding_protein_YlqC	KH domain RNA binding protein YlqC	fig|6666666.229871.peg.2377
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229871.peg.2376
L-fucose_utilization	Alpha-L-fucosidase (EC 3.2.1.51)	fig|6666666.229871.peg.2013
LOS_core_oligosaccharide_biosynthesis	Beta-1,4-galactosyltransferase	fig|6666666.229871.peg.428
LOS_core_oligosaccharide_biosynthesis	Beta-1,4-galactosyltransferase	fig|6666666.229871.peg.431
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229871.peg.1185
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229871.peg.1187
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229871.peg.1186
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229871.peg.1184
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229871.peg.1189
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229871.peg.1188
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229871.peg.2237
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.185
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.415
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.441
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229871.peg.345
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229871.peg.455
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229871.peg.163
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229871.peg.614
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229871.peg.976
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229871.peg.1054
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229871.peg.1980
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)	fig|6666666.229871.peg.980
Lactose_and_Galactose_Uptake_and_Utilization	Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)	fig|6666666.229871.peg.979
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.185
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.415
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.441
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229871.peg.163
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229871.peg.614
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.229871.peg.408
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229871.peg.57
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-)	fig|6666666.229871.peg.2246
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229871.peg.12
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229871.peg.541
Lipoic_acid_metabolism	Lipoate-protein ligase A	fig|6666666.229871.peg.1401
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229871.peg.144
Lipoprotein_Biosynthesis	Apolipoprotein N-acyltransferase (EC 2.3.1.-)	fig|6666666.229871.peg.1055
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229871.peg.1364
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229871.peg.385
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229871.peg.1567
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229871.peg.760
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229871.peg.761
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolE	fig|6666666.229871.peg.759
LysR-family_proteins_in_Escherichia_coli	Chromosome initiation inhibitor	fig|6666666.229871.peg.1940
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229871.peg.1689
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229871.peg.2172
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)	fig|6666666.229871.peg.2542
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.229871.peg.1619
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229871.peg.333
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229871.peg.334
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229871.peg.1620
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229871.peg.2425
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229871.peg.1227
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229871.peg.1263
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229871.peg.1863
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229871.peg.1864
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229871.peg.2717
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229871.peg.2519
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229871.peg.2358
Magnesium_transport	Mg/Co/Ni transporter MgtE	fig|6666666.229871.peg.1468
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229871.peg.1145
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229871.peg.345
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229871.peg.1170
Maltose_and_Maltodextrin_Utilization	Maltose O-acetyltransferase (EC 2.3.1.79)	fig|6666666.229871.peg.416
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalF	fig|6666666.229871.peg.1778
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, permease protein MalG	fig|6666666.229871.peg.1779
Maltose_and_Maltodextrin_Utilization	Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE	fig|6666666.229871.peg.1777
Maltose_and_Maltodextrin_Utilization	Oligo-1,6-glucosidase (EC 3.2.1.10)	fig|6666666.229871.peg.1652
Mannitol_Utilization	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	fig|6666666.229871.peg.284
Mannitol_Utilization	Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	fig|6666666.229871.peg.1626
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229871.peg.2151
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229871.peg.2466
Methanogenesis_strays	Ni2+-binding GTPase involved in regulation of expression and maturation of hydrogenase	fig|6666666.229871.peg.2009
Methanogenesis_strays	Uncharacterized ABC transporter ATP-binding protein MJ0121	fig|6666666.229871.peg.2008
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229871.peg.2216
Methionine_Degradation	Methionine gamma-lyase (EC 4.4.1.11)	fig|6666666.229871.peg.965
Methionine_Degradation	Methionine transporter MetT	fig|6666666.229871.peg.967
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229871.peg.963
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229871.peg.2183
Methionine_Degradation	S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)	fig|6666666.229871.peg.1645
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229871.peg.1225
Methionine_Salvage	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229871.peg.1645
Methionine_Salvage	5-methylthioribose kinase (EC 2.7.1.100)	fig|6666666.229871.peg.2214
Methionine_Salvage	Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)	fig|6666666.229871.peg.100
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229871.peg.1269
Methylglyoxal_Metabolism	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229871.peg.1269
Methylglyoxal_Metabolism	Hydroxyacylglutathione hydrolase (EC 3.1.2.6)	fig|6666666.229871.peg.1158
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229871.peg.1359
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229871.peg.13
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229871.peg.617
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32)	fig|6666666.229871.peg.519
Muconate_lactonizing_enzyme_family	L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32)	fig|6666666.229871.peg.520
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.39
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.1839
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.1875
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.1890
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.2137
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.2313
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.2546
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229871.peg.1229
Multidrug_Resistance_Efflux_Pumps	Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog	fig|6666666.229871.peg.1462
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229871.peg.2151
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229871.peg.2466
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229871.peg.921
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229871.peg.150
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229871.peg.2022
Murein_Hydrolases	Soluble lytic murein transglycosylase precursor (EC 3.2.1.-)	fig|6666666.229871.peg.1036
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229871.peg.1183
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229871.peg.1182
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.432
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.433
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.435
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.438
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.1152
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	Protein YidD	fig|6666666.229871.peg.1153
Mycobacterium_virulence_operon_involved_in_an_unknown_function_with_a_Jag_Protein_and_YidC_and_YidD	RNA-binding protein Jag	fig|6666666.229871.peg.1151
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.229871.peg.926
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.229871.peg.927
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.229871.peg.928
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229871.peg.2532
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229871.peg.2533
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229871.peg.1832
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229871.peg.2534
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229871.peg.2270
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229871.peg.1561
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229871.peg.2696
N-linked_Glycosylation_in_Bacteria	Phospholipid-lipopolysaccharide ABC transporter	fig|6666666.229871.peg.1193
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.185
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.415
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.441
NAD_and_NADP_cofactor_biosynthesis_global	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229871.peg.1547
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.229871.peg.386
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229871.peg.28
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.229871.peg.386
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229871.peg.1715
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.229871.peg.180
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229871.peg.623
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.229871.peg.376
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229871.peg.377
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229871.peg.2332
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229871.peg.2331
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229871.peg.2330
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229871.peg.2329
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229871.peg.2328
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Sodium-dependent phosphate transporter	fig|6666666.229871.peg.689
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation protein HypA	fig|6666666.229871.peg.937
NiFe_hydrogenase_maturation	[NiFe] hydrogenase nickel incorporation-associated protein HypB	fig|6666666.229871.peg.936
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.229871.peg.2011
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.229871.peg.2012
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229871.peg.1100
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229871.peg.636
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229871.peg.242
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229871.peg.1048
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229871.peg.1047
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229871.peg.326
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229871.peg.2614
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229871.peg.1042
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	ADP-ribose pyrophosphatase (EC 3.6.1.13)	fig|6666666.229871.peg.1547
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229871.peg.2527
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229871.peg.2626
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229871.peg.2623
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229871.peg.2625
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229871.peg.2624
Omega_peptidases_(EC_3.4.19.-)	Acylamino-acid-releasing enzyme (EC 3.4.19.1)	fig|6666666.229871.peg.1640
Omega_peptidases_(EC_3.4.19.-)	Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	fig|6666666.229871.peg.1716
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229871.peg.2480
One-carbon_metabolism_by_tetrahydropterines	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229871.peg.1556
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229871.peg.1597
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229871.peg.1550
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229871.peg.1550
Oxidative_stress	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229871.peg.1548
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.229871.peg.637
Oxidative_stress	Rubrerythrin	fig|6666666.229871.peg.1958
Oxidative_stress	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229871.peg.186
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.229871.peg.1365
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase A (EC 5.3.1.6)	fig|6666666.229871.peg.76
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229871.peg.1892
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229871.peg.1472
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229871.peg.1347
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.229871.peg.297
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229871.peg.2234
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229871.peg.2234
Peptidoglycan_Biosynthesis	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229871.peg.303
Peptidoglycan_Biosynthesis	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229871.peg.1143
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229871.peg.2151
Peptidoglycan_Biosynthesis	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229871.peg.2466
Peptidoglycan_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229871.peg.450
Peptidoglycan_Biosynthesis	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	fig|6666666.229871.peg.174
Peptidoglycan_Biosynthesis	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229871.peg.340
Peptidoglycan_Biosynthesis	Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C	fig|6666666.229871.peg.915
Peptidoglycan_Biosynthesis	Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13)	fig|6666666.229871.peg.1014
Peptidoglycan_Biosynthesis	Rare lipoprotein A precursor	fig|6666666.229871.peg.751
Peptidoglycan_Biosynthesis	Rod shape-determining protein RodA	fig|6666666.229871.peg.341
Peptidoglycan_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229871.peg.1636
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229871.peg.2159
Peptidoglycan_Biosynthesis	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229871.peg.698
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229871.peg.2602
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229871.peg.1909
Peptidoglycan_Biosynthesis	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229871.peg.2675
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229871.peg.1143
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229871.peg.2602
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229871.peg.1909
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--L-ornithine ligase	fig|6666666.229871.peg.2322
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229871.peg.2675
Peptidoglycan_lipid_II_flippase	Proposed peptidoglycan lipid II flippase MurJ	fig|6666666.229871.peg.1885
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229871.peg.1043
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229871.peg.649
Periplasmic_Stress_Response	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	fig|6666666.229871.peg.1099
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229871.peg.1352
Periplasmic_Stress_Response	Outer membrane stress sensor protease DegS	fig|6666666.229871.peg.1057
Persister_Cells	HipA protein	fig|6666666.229871.peg.2027
Phage_packaging_machinery	Phage portal protein	fig|6666666.229871.peg.776
Phage_packaging_machinery	Phage portal protein	fig|6666666.229871.peg.2563
Phage_packaging_machinery	Phage terminase, large subunit	fig|6666666.229871.peg.774
Phage_packaging_machinery	Phage terminase, large subunit	fig|6666666.229871.peg.2564
Phage_replication	DNA polymerase III alpha subunit (EC 2.7.7.7)	fig|6666666.229871.peg.1534
Phage_replication	DNA primase/helicase, phage-associated	fig|6666666.229871.peg.807
Phage_tail_proteins	Phage tail length tape-measure protein	fig|6666666.229871.peg.796
Phage_tail_proteins_2	Phage tail length tape-measure protein	fig|6666666.229871.peg.796
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229871.peg.68
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229871.peg.201
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229871.peg.205
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229871.peg.219
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229871.peg.562
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229871.peg.1012
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229871.peg.1502
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Death on curing protein, Doc toxin	fig|6666666.229871.peg.2123
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229871.peg.563
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229871.peg.1011
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229871.peg.1505
Phd-Doc,_YdcE-YdcD_toxin-antitoxin_(programmed_cell_death)_systems	Prevent host death protein, Phd antitoxin	fig|6666666.229871.peg.2124
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase II (EC 5.4.99.5)	fig|6666666.229871.peg.502
Phosphate_metabolism	Alkaline phosphatase like protein	fig|6666666.229871.peg.2489
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229871.peg.2663
Phosphate_metabolism	NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2)	fig|6666666.229871.peg.2664
Phosphate_metabolism	NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)	fig|6666666.229871.peg.2662
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229871.peg.2714
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229871.peg.2714
Phosphate_metabolism	Pyrophosphate-energized proton pump (EC 3.6.1.1)	fig|6666666.229871.peg.2169
Phosphate_metabolism	Sodium-dependent phosphate transporter	fig|6666666.229871.peg.689
Phosphoenolpyruvate_phosphomutase	2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)	fig|6666666.229871.peg.401
Phosphoenolpyruvate_phosphomutase	Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)	fig|6666666.229871.peg.399
Phosphoenolpyruvate_phosphomutase	Phosphonopyruvate decarboxylase (EC 4.1.1.82)	fig|6666666.229871.peg.400
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229871.peg.1142
Phosphoglycerate_mutase_protein_family	Carboxyl-terminal protease (EC 3.4.21.102)	fig|6666666.229871.peg.609
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229871.peg.130
Phosphoglycerate_mutase_protein_family	Phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229871.peg.1355
Phosphoglycerate_mutase_protein_family	Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase	fig|6666666.229871.peg.1262
Photorespiration_(oxidative_C2_cycle)	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)	fig|6666666.229871.peg.2487
Photorespiration_(oxidative_C2_cycle)	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229871.peg.55
Photorespiration_(oxidative_C2_cycle)	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229871.peg.57
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.194
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.304
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.429
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.984
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1235
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1294
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1638
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1747
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2000
Photorespiration_(oxidative_C2_cycle)	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2052
Photorespiration_(oxidative_C2_cycle)	Glycine cleavage system H protein	fig|6666666.229871.peg.54
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)	fig|6666666.229871.peg.53
Photorespiration_(oxidative_C2_cycle)	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)	fig|6666666.229871.peg.52
Photorespiration_(oxidative_C2_cycle)	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229871.peg.1466
Photorespiration_(oxidative_C2_cycle)	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229871.peg.1420
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229871.peg.813
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229871.peg.2131
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229871.peg.812
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229871.peg.953
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229871.peg.2130
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229871.peg.450
Polyadenylation_bacterial	Poly(A) polymerase (EC 2.7.7.19)	fig|6666666.229871.peg.158
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229871.peg.2526
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229871.peg.2518
Polyamine_Metabolism	5'-methylthioadenosine nucleosidase (EC 3.2.2.16)	fig|6666666.229871.peg.1645
Polyamine_Metabolism	Arginine decarboxylase (EC 4.1.1.19)	fig|6666666.229871.peg.2628
Polyamine_Metabolism	Carbamate kinase (EC 2.7.2.2)	fig|6666666.229871.peg.1230
Polyamine_Metabolism	Ornithine decarboxylase (EC 4.1.1.17)	fig|6666666.229871.peg.2628
Polyamine_Metabolism	Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)	fig|6666666.229871.peg.1722
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229871.peg.527
Polyprenyl_Diphosphate_Biosynthesis	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229871.peg.650
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229871.peg.1102
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)	fig|6666666.229871.peg.1043
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229871.peg.649
Potassium_homeostasis	Glutathione-regulated potassium-efflux system ancillary protein KefG	fig|6666666.229871.peg.1896
Potassium_homeostasis	Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase)	fig|6666666.229871.peg.1564
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229871.peg.1051
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229871.peg.1631
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229871.peg.1853
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229871.peg.1631
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229871.peg.1853
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1630
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1840
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1854
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1630
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1840
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229871.peg.1854
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229871.peg.766
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229871.peg.766
Proline,_4-hydroxyproline_uptake_and_utilization	Proline iminopeptidase (EC 3.4.11.5)	fig|6666666.229871.peg.1525
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229871.peg.2485
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229871.peg.1581
Proteasome_bacterial	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229871.peg.107
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229871.peg.106
Proteasome_bacterial	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229871.peg.1146
Proteasome_bacterial	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229871.peg.2686
Proteasome_bacterial	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229871.peg.2685
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229871.peg.2194
Proteasome_bacterial	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229871.peg.2503
Proteasome_bacterial	Site-specific tyrosine recombinase	fig|6666666.229871.peg.2684
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229871.peg.859
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229871.peg.2147
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229871.peg.2146
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229871.peg.1236
Protein_chaperones	ClpB protein	fig|6666666.229871.peg.756
Protein_chaperones	ClpB protein	fig|6666666.229871.peg.1083
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229871.peg.2145
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229871.peg.1203
Protein_degradation	Deblocking aminopeptidase (EC 3.4.11.-)	fig|6666666.229871.peg.1554
Protein_degradation	Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)	fig|6666666.229871.peg.900
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229871.peg.899
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229871.peg.107
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease adaptor protein ClpS	fig|6666666.229871.peg.898
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229871.peg.106
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229871.peg.1146
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent hsl protease ATP-binding subunit HslU	fig|6666666.229871.peg.2686
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease HslV (EC 3.4.25.-)	fig|6666666.229871.peg.2685
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229871.peg.2194
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type II	fig|6666666.229871.peg.2503
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229871.peg.756
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229871.peg.1083
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229871.peg.1275
Proteolysis_in_bacteria,_ATP-dependent	Nucleotide excision repair protein, with UvrB/UvrC motif	fig|6666666.229871.peg.758
Proteolysis_in_bacteria,_ATP-dependent	Outer membrane stress sensor protease DegS	fig|6666666.229871.peg.1057
Purine_Utilization	Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4)	fig|6666666.229871.peg.2248
Purine_Utilization	Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)	fig|6666666.229871.peg.2249
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.229871.peg.347
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229871.peg.2365
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229871.peg.1019
Purine_conversions	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229871.peg.118
Purine_conversions	Adenosine deaminase (EC 3.5.4.4)	fig|6666666.229871.peg.1728
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229871.peg.2631
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229871.peg.499
Purine_conversions	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229871.peg.154
Purine_conversions	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229871.peg.154
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229871.peg.535
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229871.peg.1418
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229871.peg.1987
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229871.peg.2504
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229871.peg.840
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2)	fig|6666666.229871.peg.154
Purine_salvage_cluster	GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2)	fig|6666666.229871.peg.154
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229871.peg.1418
Putative_TldE-TldD_proteolytic_complex	TldD family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229871.peg.1161
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229871.peg.282
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229871.peg.298
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229871.peg.281
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229871.peg.299
Putative_TldE-TldD_proteolytic_complex	TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup	fig|6666666.229871.peg.1160
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229871.peg.2234
Pyrimidine_utilization	Uracil permease	fig|6666666.229871.peg.1016
Pyrroloquinoline_Quinone_biosynthesis	Microsomal dipeptidase (EC 3.4.13.19)	fig|6666666.229871.peg.1169
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229871.peg.963
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229871.peg.2183
Pyruvate_Alanine_Serine_Interconversions	Alanine racemase (EC 5.1.1.1)	fig|6666666.229871.peg.2613
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, alpha subunit (EC 4.3.1.17)	fig|6666666.229871.peg.506
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase, beta subunit (EC 4.3.1.17)	fig|6666666.229871.peg.507
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Malate Na(+) symporter	fig|6666666.229871.peg.1451
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Malate Na(+) symporter	fig|6666666.229871.peg.1452
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	NADP-dependent malic enzyme (EC 1.1.1.40)	fig|6666666.229871.peg.1204
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate synthase (EC 2.7.9.2)	fig|6666666.229871.peg.1889
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229871.peg.1290
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229871.peg.501
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229871.peg.2338
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229871.peg.2422
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acylphosphate phosphohydrolase (EC 3.6.1.7), putative	fig|6666666.229871.peg.2300
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Aldehyde dehydrogenase (EC 1.2.1.3)	fig|6666666.229871.peg.1269
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229871.peg.1034
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229871.peg.2200
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229871.peg.1581
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.229871.peg.1149
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229871.peg.615
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229871.peg.966
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229871.peg.1226
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229871.peg.1730
Queuosine-Archaeosine_Biosynthesis	Permease of the drug/metabolite transporter (DMT) superfamily	fig|6666666.229871.peg.2198
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229871.peg.2342
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229871.peg.1209
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229871.peg.1962
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229871.peg.74
Quinate_degradation	3-dehydroquinate dehydratase I (EC 4.2.1.10)	fig|6666666.229871.peg.75
RNA_3'-terminal_phosphate_cyclase	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229871.peg.2307
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229871.peg.613
RNA_methylation	23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)	fig|6666666.229871.peg.638
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229871.peg.445
RNA_methylation	LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM	fig|6666666.229871.peg.1296
RNA_methylation	Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229871.peg.693
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229871.peg.848
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229871.peg.608
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229871.peg.2598
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229871.peg.1270
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229871.peg.2379
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229871.peg.2648
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229871.peg.1600
RNA_methylation	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229871.peg.1368
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229871.peg.2215
RNA_methylation	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229871.peg.857
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229871.peg.813
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229871.peg.2131
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229871.peg.812
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229871.peg.953
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229871.peg.2130
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229871.peg.946
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229871.peg.1270
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229871.peg.2323
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229871.peg.946
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.432
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.433
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.435
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.438
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229871.peg.1152
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229871.peg.1155
RNA_modification_cluster	Protein YidD	fig|6666666.229871.peg.1153
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229871.peg.1154
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229871.peg.2294
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229871.peg.1183
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229871.peg.1182
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229871.peg.479
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229871.peg.2514
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229871.peg.2370
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229871.peg.373
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229871.peg.1329
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229871.peg.2600
RNA_pseudouridine_syntheses	Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229871.peg.2353
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229871.peg.961
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229871.peg.1032
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229871.peg.2622
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcC	fig|6666666.229871.peg.1712
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcD	fig|6666666.229871.peg.1711
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229871.peg.992
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229871.peg.150
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229871.peg.2022
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229871.peg.488
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229871.peg.1034
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229871.peg.2200
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229871.peg.1715
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229871.peg.1841
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229871.peg.1537
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229871.peg.891
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229871.peg.1010
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229871.peg.1392
Respiratory_dehydrogenases_1	Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)	fig|6666666.229871.peg.1679
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229871.peg.2120
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229871.peg.1486
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229871.peg.1487
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229871.peg.1482
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229871.peg.1483
Restriction-Modification_System	Type III restriction-modification system methylation subunit (EC 2.1.1.72)	fig|6666666.229871.peg.1639
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229871.peg.442
Rhamnose_containing_glycans	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229871.peg.403
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.185
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.415
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229871.peg.441
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.229871.peg.2238
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229871.peg.414
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229871.peg.443
Rhamnose_containing_glycans	putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide	fig|6666666.229871.peg.420
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229871.peg.2524
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229871.peg.2524
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229871.peg.487
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229871.peg.2524
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.39
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.1839
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.1875
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.1890
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.2137
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.2313
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229871.peg.2546
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229871.peg.2524
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229871.peg.2622
Ribonuclease_H	Ribonuclease HI (EC 3.1.26.4)	fig|6666666.229871.peg.1321
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229871.peg.537
Ribonucleases_in_Bacillus	Metallo-beta-lactamase family protein, RNA-specific	fig|6666666.229871.peg.446
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229871.peg.537
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229871.peg.590
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229871.peg.319
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229871.peg.1884
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229871.peg.1878
Ribonucleotide_reduction	Ribonucleotide reductase transcriptional regulator NrdR	fig|6666666.229871.peg.318
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229871.peg.1359
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229871.peg.2532
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229871.peg.2288
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.229871.peg.1185
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.229871.peg.1187
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.229871.peg.2345
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.229871.peg.2282
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.229871.peg.2290
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.229871.peg.2279
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.229871.peg.2295
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.229871.peg.2287
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.229871.peg.2380
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229871.peg.1186
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.229871.peg.926
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.229871.peg.184
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.229871.peg.2277
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.229871.peg.2274
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.229871.peg.2283
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.229871.peg.328
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.229871.peg.182
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.229871.peg.2479
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.229871.peg.2280
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.229871.peg.2275
Ribosome_LSU_bacterial	LSU ribosomal protein L30p (L7e)	fig|6666666.229871.peg.2289
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.229871.peg.504
Ribosome_LSU_bacterial	LSU ribosomal protein L31p, zinc-dependent	fig|6666666.229871.peg.504
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.229871.peg.2512
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.229871.peg.1190
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-dependent	fig|6666666.229871.peg.1190
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.229871.peg.1155
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.229871.peg.927
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.229871.peg.2272
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.229871.peg.2273
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.229871.peg.2284
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.229871.peg.2286
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229871.peg.1184
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.229871.peg.109
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229871.peg.2378
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)	fig|6666666.229871.peg.373
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229871.peg.1329
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229871.peg.2600
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229871.peg.2598
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229871.peg.961
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229871.peg.470
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229871.peg.2379
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229871.peg.899
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229871.peg.1103
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229871.peg.1105
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229871.peg.1104
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229871.peg.858
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229871.peg.2201
Rrf2_family_transcriptional_regulators	Rrf2 family transcriptional regulator, group III	fig|6666666.229871.peg.2304
Rubrerythrin	Probable peroxiredoxin (EC 1.11.1.15)	fig|6666666.229871.peg.1548
Rubrerythrin	Rubredoxin	fig|6666666.229871.peg.2537
Rubrerythrin	Rubrerythrin	fig|6666666.229871.peg.1958
Rubrerythrin	Superoxide reductase (EC 1.15.1.2)	fig|6666666.229871.peg.186
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.229871.peg.598
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229871.peg.487
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229871.peg.597
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229871.peg.639
Selenocysteine_metabolism	L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	fig|6666666.229871.peg.1232
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229871.peg.1217
Selenocysteine_metabolism	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229871.peg.1218
Selenocysteine_metabolism	Selenocysteine-specific translation elongation factor	fig|6666666.229871.peg.688
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229871.peg.892
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229871.peg.894
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229871.peg.1217
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229871.peg.2257
Selenocysteine_metabolism	selenocysteine-containing	fig|6666666.229871.peg.2259
Serine-glyoxylate_cycle	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229871.peg.2480
Serine-glyoxylate_cycle	Enolase (EC 4.2.1.11)	fig|6666666.229871.peg.2439
Serine-glyoxylate_cycle	Formate--tetrahydrofolate ligase (EC 6.3.4.3)	fig|6666666.229871.peg.1556
Serine-glyoxylate_cycle	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229871.peg.1597
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229871.peg.519
Serine-glyoxylate_cycle	Fumarate hydratase class I, aerobic (EC 4.2.1.2)	fig|6666666.229871.peg.520
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.194
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.304
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.429
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.984
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1235
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1294
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1638
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.1747
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2000
Serine-glyoxylate_cycle	Glycerate kinase (EC 2.7.1.31)	fig|6666666.229871.peg.2052
Serine-glyoxylate_cycle	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229871.peg.1550
Serine-glyoxylate_cycle	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229871.peg.1550
Serine-glyoxylate_cycle	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229871.peg.1420
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229871.peg.51
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229871.peg.63
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229871.peg.699
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229871.peg.699
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229871.peg.1420
Serine_endopeptidase_(EC_3.4.21.-)	Prolyl endopeptidase (EC 3.4.21.26)	fig|6666666.229871.peg.2670
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Heptaprenyl diphosphate synthase component I (EC 2.5.1.30)	fig|6666666.229871.peg.650
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Hypothetical similar to thiamin biosynthesis lipoprotein ApbE	fig|6666666.229871.peg.1363
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229871.peg.1364
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229871.peg.250
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229871.peg.770
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229871.peg.1496
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	fig|6666666.229871.peg.2588
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229871.peg.856
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229871.peg.2150
SigmaB_stress_responce_regulation	Anti-sigma B factor antagonist RsbV	fig|6666666.229871.peg.2640
SigmaB_stress_responce_regulation	RNA polymerase sigma factor SigB	fig|6666666.229871.peg.1437
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229871.peg.2148
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229871.peg.2149
SigmaB_stress_responce_regulation	Serine phosphatase RsbU, regulator of sigma subunit	fig|6666666.229871.peg.2641
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229871.peg.2639
SigmaB_stress_responce_regulation	Serine-protein kinase RsbW (EC 2.7.11.1)	fig|6666666.229871.peg.2641
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229871.peg.1364
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229871.peg.302
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229871.peg.467
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229871.peg.985
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229871.peg.2161
Sporulation-associated_proteins_with_broader_functions	Protein of unknown function identified by role in sporulation (SpoVG)	fig|6666666.229871.peg.327
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229871.peg.2652
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229871.peg.110
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229871.peg.466
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.229871.peg.2185
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229871.peg.1048
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229871.peg.1047
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229871.peg.463
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229871.peg.2674
Stationary_phase_repair_cluster	FIG139438: lipoprotein B	fig|6666666.229871.peg.387
Synthesis_of_osmoregulated_periplasmic_glucans	Phosphoglycerol transferase I (EC 2.7.8.20)	fig|6666666.229871.peg.1666
TRAP_Transporter_collection	TRAP-type C4-dicarboxylate transport system, periplasmic component	fig|6666666.229871.peg.2507
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229871.peg.1047
Teichoic_and_lipoteichoic_acids_biosynthesis	N-acetylmannosaminyltransferase (EC 2.4.1.187)	fig|6666666.229871.peg.607
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)	fig|6666666.229871.peg.403
Teichoic_and_lipoteichoic_acids_biosynthesis	Teichoic acid translocation permease protein TagG	fig|6666666.229871.peg.402
Teichoic_and_lipoteichoic_acids_biosynthesis	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)	fig|6666666.229871.peg.1422
Teichoic_and_lipoteichoic_acids_biosynthesis	diglucosyldiacylglycerol synthase (LTA membrane anchor synthesis)	fig|6666666.229871.peg.2708
Teichuronic_acid_biosynthesis	Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase	fig|6666666.229871.peg.423
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229871.peg.729
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229871.peg.1380
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229871.peg.1565
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229871.peg.1773
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229871.peg.1797
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydC	fig|6666666.229871.peg.1823
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229871.peg.300
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229871.peg.728
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229871.peg.1310
Terminal_cytochrome_d_ubiquinol_oxidases	Transport ATP-binding protein CydD	fig|6666666.229871.peg.1381
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229871.peg.729
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229871.peg.1380
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229871.peg.1565
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229871.peg.1773
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229871.peg.1797
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydC	fig|6666666.229871.peg.1823
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229871.peg.300
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229871.peg.728
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229871.peg.1310
Terminal_cytochrome_oxidases	Transport ATP-binding protein CydD	fig|6666666.229871.peg.1381
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229871.peg.1832
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229871.peg.2534
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229871.peg.1832
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229871.peg.2534
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229871.peg.636
Thiamin_biosynthesis	Thiamin ABC transporter, ATPase component	fig|6666666.229871.peg.1688
Thiamin_biosynthesis	Thiamin ABC transporter, substrate-binding component	fig|6666666.229871.peg.1686
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229871.peg.1687
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229871.peg.2387
Thiamin_biosynthesis	Thiamin ABC transporter, transmembrane component	fig|6666666.229871.peg.2389
Thiamin_biosynthesis	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229871.peg.1319
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229871.peg.2255
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229871.peg.2422
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229871.peg.1581
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229871.peg.103
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229871.peg.1166
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229871.peg.2540
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229871.peg.958
Threonine_and_Homoserine_Biosynthesis	Threonine synthase (EC 4.2.3.1)	fig|6666666.229871.peg.1428
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229871.peg.1156
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.229871.peg.989
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229871.peg.121
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229871.peg.526
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229871.peg.1582
Ton_and_Tol_transport_systems	TPR domain protein, putative component of TonB system	fig|6666666.229871.peg.1752
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229871.peg.1450
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229871.peg.10
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229871.peg.69
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229871.peg.1274
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229871.peg.2002
Toxin-antitoxin_replicon_stabilization_systems	DNA-damage-inducible protein J	fig|6666666.229871.peg.2038
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229871.peg.45
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229871.peg.82
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229871.peg.1964
Toxin-antitoxin_replicon_stabilization_systems	HigA protein (antitoxin to HigB)	fig|6666666.229871.peg.2196
Toxin-antitoxin_replicon_stabilization_systems	HigB toxin protein	fig|6666666.229871.peg.2195
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229871.peg.701
Toxin-antitoxin_replicon_stabilization_systems	RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)	fig|6666666.229871.peg.2006
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229871.peg.700
Toxin-antitoxin_replicon_stabilization_systems	RelE/StbE replicon stabilization toxin	fig|6666666.229871.peg.2007
Toxin-antitoxin_replicon_stabilization_systems	VapB protein (antitoxin to VapC)	fig|6666666.229871.peg.901
Toxin-antitoxin_replicon_stabilization_systems	VapB protein (antitoxin to VapC)	fig|6666666.229871.peg.1857
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229871.peg.902
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229871.peg.1856
Toxin-antitoxin_replicon_stabilization_systems	VapC toxin protein	fig|6666666.229871.peg.2180
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229871.peg.678
Toxin-antitoxin_replicon_stabilization_systems	YefM protein (antitoxin to YoeB)	fig|6666666.229871.peg.1328
Toxin-antitoxin_replicon_stabilization_systems	YoeB toxin protein	fig|6666666.229871.peg.2003
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229871.peg.2626
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229871.peg.2499
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229871.peg.1188
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229871.peg.2237
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229871.peg.1446
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229871.peg.503
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229871.peg.2625
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229871.peg.91
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229871.peg.271
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229871.peg.334
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229871.peg.1620
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229871.peg.2425
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoE	fig|6666666.229871.peg.1634
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigB	fig|6666666.229871.peg.1437
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.229871.peg.1159
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229871.peg.1832
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229871.peg.2534
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.229871.peg.2434
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.229871.peg.2459
Translation_elongation_factor_P_lysylation	Translation elongation factor P Lys34:lysine transferase	fig|6666666.229871.peg.1038
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229871.peg.1832
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229871.peg.2534
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.229871.peg.2434
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.229871.peg.622
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.229871.peg.2459
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.229871.peg.1104
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229871.peg.2270
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229871.peg.79
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229871.peg.2623
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229871.peg.860
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229871.peg.2624
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229871.peg.928
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229871.peg.166
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229871.peg.1245
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229871.peg.766
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229871.peg.80
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229871.peg.2161
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229871.peg.1244
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229871.peg.1103
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229871.peg.466
Transport_of_Nickel_and_Cobalt	ATPase component NikO of energizing module of nickel ECF transporter	fig|6666666.229871.peg.907
Transport_of_Nickel_and_Cobalt	Additional component NikL of nickel ECF transporter	fig|6666666.229871.peg.905
Transport_of_Nickel_and_Cobalt	Additional periplasmic component NikK of nickel ECF transporter	fig|6666666.229871.peg.835
Transport_of_Nickel_and_Cobalt	Predicted cobalt ABC transporter periplasmic component	fig|6666666.229871.peg.833
Transport_of_Nickel_and_Cobalt	Substrate-specific component NikM of nickel ECF transporter	fig|6666666.229871.peg.906
Transport_of_Nickel_and_Cobalt	Transmembrane component NikQ of energizing module of nickel ECF transporter	fig|6666666.229871.peg.908
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229871.peg.309
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229871.peg.311
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229871.peg.1631
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229871.peg.1853
Trehalose_Biosynthesis	Glycogen debranching enzyme (EC 3.2.1.-)	fig|6666666.229871.peg.1641
Trehalose_Uptake_and_Utilization	Trehalase (EC 3.2.1.28)	fig|6666666.229871.peg.2484
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229871.peg.918
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229871.peg.1910
Triacylglycerol_metabolism	Lysophospholipase L2 (EC 3.1.1.5)	fig|6666666.229871.peg.1898
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229871.peg.918
Triacylglycerol_metabolism	Monoglyceride lipase (EC 3.1.1.23)	fig|6666666.229871.peg.1910
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229871.peg.494
Two-component_regulatory_systems_in_Campylobacter	Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY	fig|6666666.229871.peg.695
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229871.peg.26
Two-component_regulatory_systems_in_Campylobacter	Positive regulator of CheA protein activity (CheW)	fig|6666666.229871.peg.492
Two-component_regulatory_systems_in_Campylobacter	Signal transduction histidine kinase CheA (EC 2.7.3.-)	fig|6666666.229871.peg.491
Two-component_sensor_regulator_linked_to_Carbon_Starvation_Protein_A	Carbon starvation protein A	fig|6666666.229871.peg.1549
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229871.peg.1486
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229871.peg.1487
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229871.peg.1482
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229871.peg.1483
Type_VI_secretion_systems	ClpB protein	fig|6666666.229871.peg.756
Type_VI_secretion_systems	ClpB protein	fig|6666666.229871.peg.1083
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229871.peg.2359
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)	fig|6666666.229871.peg.1636
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7)	fig|6666666.229871.peg.2159
USS-DB-7	ClpB protein	fig|6666666.229871.peg.756
USS-DB-7	ClpB protein	fig|6666666.229871.peg.1083
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229871.peg.1847
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229871.peg.1625
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229871.peg.1327
Universal_GTPases	GTP-binding protein Era	fig|6666666.229871.peg.624
Universal_GTPases	GTP-binding protein HflX	fig|6666666.229871.peg.1491
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229871.peg.181
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229871.peg.845
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229871.peg.946
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229871.peg.451
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229871.peg.763
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229871.peg.862
Universal_GTPases	Translation elongation factor G	fig|6666666.229871.peg.1832
Universal_GTPases	Translation elongation factor G	fig|6666666.229871.peg.2534
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229871.peg.622
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229871.peg.2270
Universal_GTPases	Translation initiation factor 2	fig|6666666.229871.peg.2624
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229871.peg.2234
Unknown_carbohydrate_utilization_(_cluster_Yeg_)	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)	fig|6666666.229871.peg.1883
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229871.peg.46
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 4	fig|6666666.229871.peg.1253
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229871.peg.1471
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229871.peg.750
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229871.peg.1478
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229871.peg.2457
Yfa_cluster	Competence/damage-inducible protein CinA	fig|6666666.229871.peg.142
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229871.peg.470
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229871.peg.1263
YjeE	NAD(P)HX dehydratase	fig|6666666.229871.peg.358
YjeE	NAD(P)HX epimerase	fig|6666666.229871.peg.358
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229871.peg.470
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229871.peg.471
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229871.peg.694
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229871.peg.853
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229871.peg.1343
Zinc_resistance	Response regulator of zinc sigma-54-dependent two-component system	fig|6666666.229871.peg.2539
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229871.peg.106
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229871.peg.1146
cAMP_signaling_in_bacteria	Adenine phosphoribosyltransferase (EC 2.4.2.7)	fig|6666666.229871.peg.118
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229871.peg.710
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229871.peg.1696
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229871.peg.1744
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229871.peg.1941
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229871.peg.1950
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229871.peg.2421
cAMP_signaling_in_bacteria	Prophage Clp protease-like protein	fig|6666666.229871.peg.786
cAMP_signaling_in_bacteria	cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases	fig|6666666.229871.peg.486
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229871.peg.2678
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229871.peg.2677
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229871.peg.2676
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229871.peg.2679
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229871.peg.1143
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229871.peg.2602
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229871.peg.2678
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229871.peg.2677
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229871.peg.2679
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229871.peg.698
dTDP-rhamnose_synthesis	Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33)	fig|6666666.229871.peg.411
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229871.peg.442
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229871.peg.414
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229871.peg.443
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.1216
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.1643
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.2204
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229871.peg.827
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229871.peg.946
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229871.peg.2323
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229871.peg.175
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229871.peg.2430
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229871.peg.2683
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229871.peg.111
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229871.peg.814
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229871.peg.2209
pyrimidine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229871.peg.2365
pyrimidine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229871.peg.1019
pyrimidine_conversions	CTP synthase (EC 6.3.4.2)	fig|6666666.229871.peg.1443
pyrimidine_conversions	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229871.peg.656
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229871.peg.854
pyrimidine_conversions	Cytidylate kinase (EC 2.7.4.25)	fig|6666666.229871.peg.2604
pyrimidine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229871.peg.1987
pyrimidine_conversions	Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2)	fig|6666666.229871.peg.957
pyrimidine_conversions	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229871.peg.2255
pyrimidine_conversions	Thymidylate kinase (EC 2.7.4.9)	fig|6666666.229871.peg.1349
pyrimidine_conversions	Uridine kinase (EC 2.7.1.48)	fig|6666666.229871.peg.1045
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229871.peg.2524
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229871.peg.2524
tRNA-dependent_amino_acid_transfers	tRNA-dependent lipid II--amino acid ligase	fig|6666666.229871.peg.172
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229871.peg.93
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229871.peg.2463
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229871.peg.2467
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229871.peg.24
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6)	fig|6666666.229871.peg.2103
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6)	fig|6666666.229871.peg.2102
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6)	fig|6666666.229871.peg.2104
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229871.peg.1635
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229871.peg.1743
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	fig|6666666.229871.peg.2103
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	fig|6666666.229871.peg.2102
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	fig|6666666.229871.peg.2104
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24)	fig|6666666.229871.peg.1743
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229871.peg.1557
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229871.peg.444
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229871.peg.1417
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229871.peg.1097
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class I) (EC 6.1.1.6)	fig|6666666.229871.peg.1304
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229871.peg.2580
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229871.peg.1654
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229871.peg.652
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type	fig|6666666.229871.peg.986
tRNA_aminoacylation,_Pro	tRNA proofreading protein STM4549	fig|6666666.229871.peg.1126
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229871.peg.1063
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229871.peg.2607
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229871.peg.25
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229871.peg.2354
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229871.peg.352
tRNA_modification_Bacteria	COG0613, Predicted metal-dependent phosphoesterases (PHP family)	fig|6666666.229871.peg.1367
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.1216
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.1643
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7)	fig|6666666.229871.peg.2204
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229871.peg.827
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229871.peg.656
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229871.peg.533
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.229871.peg.335
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229871.peg.946
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.229871.peg.2184
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.229871.peg.2185
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.229871.peg.2186
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229871.peg.1209
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229871.peg.1217
tRNA_modification_Bacteria	Selenide,water dikinase (EC 2.7.9.3)	fig|6666666.229871.peg.1218
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229871.peg.2379
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229871.peg.2648
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229871.peg.1600
tRNA_modification_Bacteria	tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35)	fig|6666666.229871.peg.1368
tRNA_modification_Bacteria	tRNA S(4)U 4-thiouridine synthase (former ThiI)	fig|6666666.229871.peg.1319
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229871.peg.1479
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229871.peg.1667
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229871.peg.449
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229871.peg.1607
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229871.peg.1032
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229871.peg.2622
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229871.peg.2323
tRNA_modification_Bacteria	tRNA(Cytosine32)-2-thiocytidine synthetase	fig|6666666.229871.peg.1979
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229871.peg.329
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229871.peg.1962
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229871.peg.13
tRNA_modification_Bacteria	tRNA:Cm32/Um32 methyltransferase	fig|6666666.229871.peg.857
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229871.peg.2518
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229871.peg.1154
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.229871.peg.675
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229871.peg.449
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229871.peg.1607
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229871.peg.1032
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229871.peg.2622
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229871.peg.329
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229871.peg.13
tRNA_splicing	RNA-2',3'-PO4:RNA-5'-OH ligase	fig|6666666.229871.peg.2307
tRNAs	tRNA-Ala-CGC	fig|6666666.229871.rna.41
tRNAs	tRNA-Ala-GGC	fig|6666666.229871.rna.29
tRNAs	tRNA-Arg-GCG	fig|6666666.229871.rna.35
tRNAs	tRNA-Cys-GCA	fig|6666666.229871.rna.32
tRNAs	tRNA-Gly-GCC	fig|6666666.229871.rna.3
tRNAs	tRNA-Leu-CAA	fig|6666666.229871.rna.27
tRNAs	tRNA-Leu-CAG	fig|6666666.229871.rna.42
tRNAs	tRNA-Leu-GAG	fig|6666666.229871.rna.5
tRNAs	tRNA-Phe-GAA	fig|6666666.229871.rna.4
tRNAs	tRNA-Pro-CGG	fig|6666666.229871.rna.25
tRNAs	tRNA-Pro-GGG	fig|6666666.229871.rna.6
tRNAs	tRNA-Ser-GGA	fig|6666666.229871.rna.33
tRNAs	tRNA-Trp-CCA	fig|6666666.229871.rna.22
tRNAs	tRNA-Val-GAC	fig|6666666.229871.rna.7
