16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229940.peg.2269
16S_rRNA_modification_within_P_site_of_ribosome	Cell division protein FtsL	fig|6666666.229940.peg.2270
16S_rRNA_modification_within_P_site_of_ribosome	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229940.peg.1629
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase H	fig|6666666.229940.peg.2271
16S_rRNA_modification_within_P_site_of_ribosome	rRNA small subunit methyltransferase I	fig|6666666.229940.peg.832
2-phosphoglycolate_salvage	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229940.peg.2277
5-FCL-like_protein	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229940.peg.2324
5-FCL-like_protein	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229940.peg.1189
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229940.peg.358
5-FCL-like_protein	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229940.peg.2659
5-FCL-like_protein	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.229940.peg.301
5-FCL-like_protein	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229940.peg.2357
5-FCL-like_protein	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229940.peg.1731
5-FCL-like_protein	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229940.peg.1728
5-FCL-like_protein	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229940.peg.2353
5-FCL-like_protein	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229940.peg.1625
5-FCL-like_protein	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229940.peg.220
5-FCL-like_protein	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229940.peg.901
5-FCL-like_protein	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229940.peg.657
5-FCL-like_protein	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229940.peg.1432
ABC_transporter_alkylphosphonate_(TC_3.A.1.9.1)	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	fig|6666666.229940.peg.409
A_Gammaproteobacteria_Cluster_Relating_to_Translation	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55)	fig|6666666.229940.peg.2147
A_Gammaproteobacteria_Cluster_Relating_to_Translation	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229940.peg.1418
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Peptide chain release factor 1	fig|6666666.229940.peg.2036
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229940.peg.1978
A_Gammaproteobacteria_Cluster_Relating_to_Translation	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229940.peg.612
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229940.peg.2045
Adenosyl_nucleosidases	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229940.peg.2180
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatA (Bacteroides aerotolerance operon)	fig|6666666.229940.peg.1465
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatB	fig|6666666.229940.peg.1464
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatC	fig|6666666.229940.peg.1463
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatD	fig|6666666.229940.peg.1462
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	BatE	fig|6666666.229940.peg.1461
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	MoxR-like ATPase in aerotolerance operon	fig|6666666.229940.peg.1468
Aerotolerance_operon_in_Bacteroides_and_potentially_orthologous_operons_in_other_organisms	hypothetical protein PA3071	fig|6666666.229940.peg.1467
Alanine_biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229940.peg.1547
Alanine_biosynthesis	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229940.peg.699
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229940.peg.17
Aminopeptidases_(EC_3.4.11.-)	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229940.peg.2577
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229940.peg.540
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229940.peg.861
Ammonia_assimilation	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229940.peg.1998
Ammonia_assimilation	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229940.peg.328
Ammonia_assimilation	Glutamine synthetase type III, GlnN (EC 6.3.1.2)	fig|6666666.229940.peg.1038
Ammonia_assimilation	Glutamine synthetase type III, GlnN (EC 6.3.1.2)	fig|6666666.229940.peg.2097
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229940.peg.295
Archaeal_lipids	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229940.peg.2511
Archaeal_lipids	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229940.peg.2242
Archaeal_lipids	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229940.peg.2244
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229940.peg.295
Archaeal_lipids	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229940.peg.2511
Archaeal_lipids	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.229940.peg.674
Arginine_Biosynthesis_--_gjo	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.229940.peg.1416
Arginine_Biosynthesis_--_gjo	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.229940.peg.809
Arginine_Biosynthesis_--_gjo	Acetylornithine deacetylase (EC 3.5.1.16)	fig|6666666.229940.peg.649
Arginine_Biosynthesis_--_gjo	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229940.peg.813
Arginine_Biosynthesis_--_gjo	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.229940.peg.1075
Arginine_Biosynthesis_--_gjo	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.229940.peg.811
Arginine_Biosynthesis_--_gjo	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.229940.peg.810
Arginine_Biosynthesis_--_gjo	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.229940.peg.909
Arginine_Biosynthesis_--_gjo	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229940.peg.1396
Arginine_Biosynthesis_extended	Acetylglutamate kinase (EC 2.7.2.8)	fig|6666666.229940.peg.1416
Arginine_Biosynthesis_extended	Acetylornithine aminotransferase (EC 2.6.1.11)	fig|6666666.229940.peg.809
Arginine_Biosynthesis_extended	Acetylornithine deacetylase (EC 3.5.1.16)	fig|6666666.229940.peg.649
Arginine_Biosynthesis_extended	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229940.peg.813
Arginine_Biosynthesis_extended	Argininosuccinate lyase (EC 4.3.2.1)	fig|6666666.229940.peg.1075
Arginine_Biosynthesis_extended	Argininosuccinate synthase (EC 6.3.4.5)	fig|6666666.229940.peg.811
Arginine_Biosynthesis_extended	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	fig|6666666.229940.peg.810
Arginine_Biosynthesis_extended	N-acetylglutamate synthase (EC 2.3.1.1)	fig|6666666.229940.peg.909
Arginine_Biosynthesis_extended	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229940.peg.1396
Arginine_Deiminase_Pathway	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229940.peg.813
Arginine_Deiminase_Pathway	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229940.peg.1396
Arginine_and_Ornithine_Degradation	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.229940.peg.1034
Arginine_and_Ornithine_Degradation	Arginine pathway regulatory protein ArgR, repressor of arg regulon	fig|6666666.229940.peg.813
Arginine_and_Ornithine_Degradation	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.229940.peg.1033
Arginine_and_Ornithine_Degradation	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229940.peg.1203
Arginine_and_Ornithine_Degradation	Ornithine carbamoyltransferase (EC 2.1.3.3)	fig|6666666.229940.peg.1396
Aromatic_amino_acid_interconversions_with_aryl_acids	Amino acid-binding ACT	fig|6666666.229940.peg.1326
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.229940.peg.11
Aromatic_amino_acid_interconversions_with_aryl_acids	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.229940.peg.10
Aromatic_amino_acid_interconversions_with_aryl_acids	Phenylacetate-coenzyme A ligase (EC 6.2.1.30)	fig|6666666.229940.peg.6
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229940.peg.1238
Bacterial_Cell_Division	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229940.peg.1496
Bacterial_Cell_Division	Cell division protein FtsA	fig|6666666.229940.peg.2261
Bacterial_Cell_Division	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229940.peg.2113
Bacterial_Cell_Division	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229940.peg.2269
Bacterial_Cell_Division	Cell division protein FtsK	fig|6666666.229940.peg.1305
Bacterial_Cell_Division	Cell division protein FtsL	fig|6666666.229940.peg.2270
Bacterial_Cell_Division	Cell division protein FtsQ	fig|6666666.229940.peg.2262
Bacterial_Cell_Division	Cell division protein FtsW	fig|6666666.229940.peg.2265
Bacterial_Cell_Division	Cell division protein FtsX	fig|6666666.229940.peg.761
Bacterial_Cell_Division	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229940.peg.2260
Bacterial_Cell_Division	Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)	fig|6666666.229940.peg.1477
Bacterial_Cell_Division	Cell division trigger factor (EC 5.2.1.8)	fig|6666666.229940.peg.2641
Bacterial_Cell_Division	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229940.peg.1707
Bacterial_Cell_Division	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229940.peg.2534
Bacterial_Cell_Division	GTP-binding protein Era	fig|6666666.229940.peg.1085
Bacterial_Cell_Division	Rod shape-determining protein MreB	fig|6666666.229940.peg.1626
Bacterial_Cell_Division	Rod shape-determining protein MreC	fig|6666666.229940.peg.1627
Bacterial_Cell_Division	Rod shape-determining protein MreD	fig|6666666.229940.peg.1628
Bacterial_Cell_Division	Septum formation protein Maf	fig|6666666.229940.peg.1504
Bacterial_Cell_Division	Septum site-determining protein MinD	fig|6666666.229940.peg.2627
Bacterial_Cell_Division	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229940.peg.1472
Bacterial_Cell_Division	rRNA small subunit methyltransferase H	fig|6666666.229940.peg.2271
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229940.peg.1238
Bacterial_Cytoskeleton	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229940.peg.1496
Bacterial_Cytoskeleton	Cell division protein FtsA	fig|6666666.229940.peg.2261
Bacterial_Cytoskeleton	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229940.peg.2269
Bacterial_Cytoskeleton	Cell division protein FtsK	fig|6666666.229940.peg.1305
Bacterial_Cytoskeleton	Cell division protein FtsL	fig|6666666.229940.peg.2270
Bacterial_Cytoskeleton	Cell division protein FtsQ	fig|6666666.229940.peg.2262
Bacterial_Cytoskeleton	Cell division protein FtsW	fig|6666666.229940.peg.2265
Bacterial_Cytoskeleton	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229940.peg.2260
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229940.peg.1707
Bacterial_Cytoskeleton	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229940.peg.1708
Bacterial_Cytoskeleton	Rod shape-determining protein MreB	fig|6666666.229940.peg.1626
Bacterial_Cytoskeleton	Rod shape-determining protein MreC	fig|6666666.229940.peg.1627
Bacterial_Cytoskeleton	Rod shape-determining protein MreD	fig|6666666.229940.peg.1628
Bacterial_Cytoskeleton	Rod shape-determining protein RodA	fig|6666666.229940.peg.1630
Bacterial_Cytoskeleton	Septum formation protein Maf	fig|6666666.229940.peg.1504
Bacterial_Cytoskeleton	Septum site-determining protein MinD	fig|6666666.229940.peg.2627
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cell division protein FtsK	fig|6666666.229940.peg.1305
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229940.peg.787
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229940.peg.1942
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229940.peg.258
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	Trk system potassium uptake protein TrkA	fig|6666666.229940.peg.1115
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229940.peg.93
Bacterial_RNA-metabolizing_Zn-dependent_hydrolases	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229940.peg.2428
Bacterial_cell_division_cluster	DNA repair protein RadC	fig|6666666.229940.peg.1987
Bacterial_cell_division_cluster	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229940.peg.1629
Bacterial_cell_division_cluster	Rod shape-determining protein MreB	fig|6666666.229940.peg.1626
Bacterial_cell_division_cluster	Rod shape-determining protein MreC	fig|6666666.229940.peg.1627
Bacterial_cell_division_cluster	Rod shape-determining protein MreD	fig|6666666.229940.peg.1628
Bacterial_cell_division_cluster	Rod shape-determining protein RodA	fig|6666666.229940.peg.1630
Bacterial_cell_division_cluster	Septum formation protein Maf	fig|6666666.229940.peg.1504
Bacterial_cell_division_cluster	Septum site-determining protein MinD	fig|6666666.229940.peg.2627
Bacterial_checkpoint-control-related_cluster	Bacterial checkpoint controller DisA with nucleotide-binding domain	fig|6666666.229940.peg.1250
Bacterial_checkpoint-control-related_cluster	Diadenylate cyclase spyDAC	fig|6666666.229940.peg.1250
Bacterial_checkpoint-control-related_cluster	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229940.peg.865
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229940.peg.1472
Bacterial_signal_recognition_particle_(SRP)	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229940.peg.2352
Benzoate_transport_and_degradation_cluster	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229940.peg.758
Beta-Glucoside_Metabolism	Beta-glucanase precursor (EC 3.2.1.73)	fig|6666666.229940.peg.1852
Beta-Glucoside_Metabolism	Beta-glucosidase (EC 3.2.1.21)	fig|6666666.229940.peg.587
Beta-Glucoside_Metabolism	Beta-glucosidase (EC 3.2.1.21)	fig|6666666.229940.peg.588
Beta-Glucoside_Metabolism	Periplasmic beta-glucosidase (EC 3.2.1.21)	fig|6666666.229940.peg.97
Beta-lactamase	Beta-lactamase class C and other penicillin binding proteins	fig|6666666.229940.peg.104
Biogenesis_of_c-type_cytochromes	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.229940.peg.2031
Biogenesis_of_c-type_cytochromes	Putative cytochrome C-type biogenesis protein	fig|6666666.229940.peg.2194
Biotin_biosynthesis_Experimental	8-amino-7-oxononanoate synthase (EC 2.3.1.47)	fig|6666666.229940.peg.1334
Biotin_biosynthesis_Experimental	Biotin synthesis protein BioC	fig|6666666.229940.peg.451
Biotin_biosynthesis_Experimental	Competence protein F homolog, phosphoribosyltransferase domain	fig|6666666.229940.peg.1980
Branched-Chain_Amino_Acid_Biosynthesis	(R)-citramalate synthase (EC 2.3.1.182)	fig|6666666.229940.peg.1779
Branched-Chain_Amino_Acid_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.229940.peg.1775
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.229940.peg.1776
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.229940.peg.1778
Branched-Chain_Amino_Acid_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.229940.peg.1780
Branched-Chain_Amino_Acid_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229940.peg.1547
Branched-Chain_Amino_Acid_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.229940.peg.1656
Broadly_distributed_proteins_not_in_subsystems	UPF0028 protein YchK	fig|6666666.229940.peg.610
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229940.peg.2242
Butanol_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229940.peg.2244
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229940.peg.358
Butanol_Biosynthesis	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229940.peg.2659
Butanol_Biosynthesis	NADH-dependent butanol dehydrogenase A (EC 1.1.1.-)	fig|6666666.229940.peg.2315
Butanol_Biosynthesis	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229940.peg.335
CBSS-1352.1.peg.856	Transcriptional regulator, PadR family	fig|6666666.229940.peg.541
CBSS-138119.3.peg.2719	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229940.peg.1513
CBSS-138119.3.peg.2719	Ribosome-binding factor A	fig|6666666.229940.peg.1965
CBSS-138119.3.peg.2719	Translation initiation factor 2	fig|6666666.229940.peg.685
CBSS-138119.3.peg.2719	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229940.peg.764
CBSS-176279.3.peg.868	GTP-binding protein Obg	fig|6666666.229940.peg.125
CBSS-176279.3.peg.868	LSU ribosomal protein L21p	fig|6666666.229940.peg.866
CBSS-176279.3.peg.868	LSU ribosomal protein L27p	fig|6666666.229940.peg.867
CBSS-176280.1.peg.1561	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.229940.peg.2536
CBSS-176280.1.peg.1561	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.229940.peg.1330
CBSS-176280.1.peg.1561	Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)	fig|6666666.229940.peg.1620
CBSS-196164.1.peg.461	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)	fig|6666666.229940.peg.238
CBSS-211586.1.peg.2832	Preprotein translocase subunit YajC (TC 3.A.5.1.1)	fig|6666666.229940.peg.1856
CBSS-211586.1.peg.2832	Protein-export membrane protein SecD (TC 3.A.5.1.1)	fig|6666666.229940.peg.1539
CBSS-211586.1.peg.2832	Protein-export membrane protein SecF (TC 3.A.5.1.1)	fig|6666666.229940.peg.1539
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229940.peg.443
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229940.peg.765
CBSS-211586.1.peg.2832	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229940.peg.1222
CBSS-211586.1.peg.2832	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229940.peg.2704
CBSS-216600.3.peg.802	Peptide chain release factor 1	fig|6666666.229940.peg.2036
CBSS-216600.3.peg.802	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229940.peg.1978
CBSS-224308.1.peg.3555	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229940.peg.20
CBSS-224911.1.peg.435	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229940.peg.2072
CBSS-226186.1.peg.3978	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229940.peg.826
CBSS-226186.1.peg.3978	FIG032012: hypothetical protein	fig|6666666.229940.peg.827
CBSS-226186.1.peg.3978	FIG036016: hypothetical protein	fig|6666666.229940.peg.828
CBSS-226186.1.peg.3994	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229940.peg.1341
CBSS-226186.1.peg.3994	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229940.peg.1342
CBSS-226186.1.peg.3994	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229940.peg.1718
CBSS-226186.1.peg.3994	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229940.peg.2763
CBSS-226186.1.peg.3994	Peptidase, family M23 (EC 3.4.24.-)	fig|6666666.229940.peg.1717
CBSS-226186.1.peg.4253	DNA recombination and repair protein RecF	fig|6666666.229940.peg.1187
CBSS-226186.1.peg.4253	FIG170660: TPR domain protein	fig|6666666.229940.peg.1186
CBSS-226186.1.peg.4416	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229940.peg.150
CBSS-226186.1.peg.4416	Cell division ZapA family protein	fig|6666666.229940.peg.151
CBSS-226186.1.peg.4416	FIG034863: hypothetical protein	fig|6666666.229940.peg.152
CBSS-228410.1.peg.134	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.229940.peg.73
CBSS-228410.1.peg.134	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229940.peg.23
CBSS-228410.1.peg.134	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229940.peg.1710
CBSS-243265.1.peg.198	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229940.peg.994
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229940.peg.103
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229940.peg.448
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229940.peg.455
CBSS-246196.1.peg.364	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	fig|6666666.229940.peg.1211
CBSS-257314.1.peg.752	Acetate kinase (EC 2.7.2.1)	fig|6666666.229940.peg.1248
CBSS-257314.1.peg.752	Adenine-specific methyltransferase (EC 2.1.1.72)	fig|6666666.229940.peg.141
CBSS-266117.6.peg.1260	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229940.peg.826
CBSS-266117.6.peg.1260	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229940.peg.227
CBSS-269801.1.peg.1715	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229940.peg.826
CBSS-269801.1.peg.1715	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229940.peg.227
CBSS-272943.3.peg.1367	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229940.peg.659
CBSS-272943.3.peg.1367	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229940.peg.1757
CBSS-290633.1.peg.1906	GTP-binding protein EngA	fig|6666666.229940.peg.1084
CBSS-312309.3.peg.1965	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229940.peg.2385
CBSS-312309.3.peg.1965	SSU ribosomal protein S2p (SAe)	fig|6666666.229940.peg.174
CBSS-312309.3.peg.1965	Translation elongation factor Ts	fig|6666666.229940.peg.173
CBSS-312309.3.peg.1965	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229940.peg.2523
CBSS-315749.4.peg.3658	Glycine cleavage system H protein	fig|6666666.229940.peg.1196
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229940.peg.725
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229940.peg.732
CBSS-315749.4.peg.3658	Thioredoxin	fig|6666666.229940.peg.753
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.229940.peg.1594
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.229940.peg.2048
CBSS-315749.4.peg.3658	Toprim domain protein	fig|6666666.229940.peg.2677
CBSS-323097.3.peg.2594	FIG004453: protein YceG like	fig|6666666.229940.peg.12
CBSS-323097.3.peg.2594	Guanylate kinase (EC 2.7.4.8)	fig|6666666.229940.peg.1193
CBSS-323097.3.peg.2594	Protein YicC	fig|6666666.229940.peg.1194
CBSS-323850.3.peg.3269	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229940.peg.1479
CBSS-326442.4.peg.1852	LSU m5C1962 methyltransferase RlmI	fig|6666666.229940.peg.1614
CBSS-326442.4.peg.1852	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229940.peg.869
CBSS-342610.3.peg.1536	DNA polymerase III epsilon subunit (EC 2.7.7.7)	fig|6666666.229940.peg.73
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229940.peg.23
CBSS-342610.3.peg.1536	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229940.peg.1710
CBSS-342610.3.peg.1794	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229940.peg.226
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229940.peg.574
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229940.peg.2080
CBSS-349161.4.peg.2417	DNA primase (EC 2.7.7.-)	fig|6666666.229940.peg.2363
CBSS-349161.4.peg.2417	RNA polymerase sigma factor RpoD	fig|6666666.229940.peg.2290
CBSS-354.1.peg.2917	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229940.peg.2534
CBSS-354.1.peg.2917	Rod shape-determining protein MreC	fig|6666666.229940.peg.1627
CBSS-354.1.peg.2917	Rod shape-determining protein MreD	fig|6666666.229940.peg.1628
CBSS-354.1.peg.2917	Septum formation protein Maf	fig|6666666.229940.peg.1504
CBSS-354.1.peg.2917	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229940.peg.391
CBSS-36873.1.peg.4752	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.229940.peg.646
CBSS-36873.1.peg.4752	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229940.peg.2559
CBSS-393011.11.peg.386	Heat shock protein HtpX (EC 3.4.24.-)	fig|6666666.229940.peg.1809
CBSS-393011.11.peg.386	LemA protein	fig|6666666.229940.peg.890
CBSS-393011.11.peg.386	LemA protein	fig|6666666.229940.peg.1810
CBSS-393121.3.peg.1913	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229940.peg.2121
CBSS-393121.3.peg.1913	DNA ligase (EC 6.5.1.2)	fig|6666666.229940.peg.1823
CBSS-393124.3.peg.2657	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229940.peg.310
CBSS-393130.3.peg.794	Free methionine-(R)-sulfoxide reductase, contains GAF domain	fig|6666666.229940.peg.1952
CBSS-393130.3.peg.794	SSU ribosomal protein S4p (S9e)	fig|6666666.229940.peg.2380
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229940.peg.742
CBSS-56780.10.peg.1536	Magnesium and cobalt efflux protein CorC	fig|6666666.229940.peg.2538
CBSS-56780.10.peg.1536	Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog	fig|6666666.229940.peg.2742
CBSS-56780.10.peg.1536	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229940.peg.2498
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229940.peg.2575
CBSS-56780.10.peg.1536	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229940.peg.2575
CBSS-630.2.peg.3360	Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	fig|6666666.229940.peg.2137
CBSS-83331.1.peg.3039	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229940.peg.988
CBSS-83331.1.peg.3039	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229940.peg.1198
CBSS-83331.1.peg.3039	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229940.peg.2269
CBSS-83331.1.peg.3039	Penicillin-binding protein 2 (PBP-2)	fig|6666666.229940.peg.1629
CBSS-83331.1.peg.3039	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229940.peg.1974
CBSS-87626.3.peg.3639	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229940.peg.2555
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229940.peg.17
CBSS-87626.3.peg.3639	Xaa-Pro aminopeptidase (EC 3.4.11.9)	fig|6666666.229940.peg.2577
CBSS-89187.3.peg.2957	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229940.peg.738
CBSS-89187.3.peg.2957	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229940.peg.1942
CMP-N-acetylneuraminate_Biosynthesis	N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43)	fig|6666666.229940.peg.243
CMP-N-acetylneuraminate_Biosynthesis	N-acetylneuraminate synthase (EC 2.5.1.56)	fig|6666666.229940.peg.244
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.229940.peg.252
CMP-N-acetylneuraminate_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.229940.peg.2332
CRISPR-associated_cluster	CRISPR repeat RNA endoribonuclease Cas6	fig|6666666.229940.peg.1031
CRISPR-associated_cluster	CRISPR-associated RAMP Csm3	fig|6666666.229940.peg.1020
CRISPR-associated_cluster	CRISPR-associated RAMP protein, Csm4 family	fig|6666666.229940.peg.1019
CRISPR-associated_cluster	CRISPR-associated protein, Csm1 family	fig|6666666.229940.peg.1022
CRISPR-associated_cluster	CRISPR-associated protein, Csm2 family	fig|6666666.229940.peg.1021
CRISPR-associated_cluster	CRISPR-associated protein, Csm5 family	fig|6666666.229940.peg.1018
CRISPR-associated_cluster	DUF324 domain-containing protein	fig|6666666.229940.peg.1831
CRISPR-associated_cluster	DUF324 domain-containing protein	fig|6666666.229940.peg.1833
CRISPR-associated_cluster	DUF324 domain-containing protein	fig|6666666.229940.peg.1835
CRISPRs	CRISPR repeat RNA endoribonuclease Cas6	fig|6666666.229940.peg.1031
CRISPRs	CRISPR-associated RAMP Csm3	fig|6666666.229940.peg.1020
CRISPRs	CRISPR-associated RAMP protein, Csm4 family	fig|6666666.229940.peg.1019
CRISPRs	CRISPR-associated RecB family exonuclease Cas4a	fig|6666666.229940.peg.1023
CRISPRs	CRISPR-associated helicase Cas3	fig|6666666.229940.peg.1026
CRISPRs	CRISPR-associated protein Cas1	fig|6666666.229940.peg.1016
CRISPRs	CRISPR-associated protein Cas2	fig|6666666.229940.peg.1015
CRISPRs	CRISPR-associated protein, Csm1 family	fig|6666666.229940.peg.1022
CRISPRs	CRISPR-associated protein, Csm2 family	fig|6666666.229940.peg.1021
CRISPRs	CRISPR-associated protein, Csm5 family	fig|6666666.229940.peg.1018
CRISP_Cmr_Cluster	CRISPR-associated protein TM1812	fig|6666666.229940.peg.1017
CRISP_Cmr_Cluster	CRISPR-associated protein TM1812	fig|6666666.229940.peg.1829
CTP_synthase_(EC_6.3.4.2)_cluster	CTP synthase (EC 6.3.4.2)	fig|6666666.229940.peg.1356
CTP_synthase_(EC_6.3.4.2)_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229940.peg.1355
Calvin-Benson_cycle	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.229940.peg.1606
Calvin-Benson_cycle	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229940.peg.2152
Calvin-Benson_cycle	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229940.peg.1807
Calvin-Benson_cycle	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229940.peg.2274
Calvin-Benson_cycle	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229940.peg.2288
Calvin-Benson_cycle	Transketolase (EC 2.2.1.1)	fig|6666666.229940.peg.2275
Calvin-Benson_cycle	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229940.peg.59
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229940.peg.1533
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229940.peg.2217
Campylobacter_Iron_Metabolism	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229940.peg.2510
Campylobacter_Iron_Metabolism	Ferrous iron transport protein B	fig|6666666.229940.peg.1003
Campylobacter_Iron_Metabolism	Magnesium and cobalt transport protein CorA	fig|6666666.229940.peg.2019
Capsular_Polysaccharides_Biosynthesis_and_Assembly	Oligosaccharide repeat unit polymerase Wzy	fig|6666666.229940.peg.1135
Capsular_Polysaccharides_Biosynthesis_and_Assembly	Oligosaccharide repeat unit polymerase Wzy	fig|6666666.229940.peg.1136
Capsular_Polysaccharides_Biosynthesis_and_Assembly	Tyrosine-protein kinase Wzc (EC 2.7.10.2)	fig|6666666.229940.peg.1144
Capsular_heptose_biosynthesis	GDP-L-fucose synthetase (EC 1.1.1.271)	fig|6666666.229940.peg.1505
Capsular_heptose_biosynthesis	GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	fig|6666666.229940.peg.1506
Capsular_heptose_biosynthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229940.peg.147
Cardiolipin_synthesis	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.229940.peg.825
Cell_Division_Subsystem_including_YidCD	Chromosomal replication initiator protein DnaA	fig|6666666.229940.peg.1641
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229940.peg.1707
Cell_Division_Subsystem_including_YidCD	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229940.peg.1708
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229940.peg.1456
Cell_Division_Subsystem_including_YidCD	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229940.peg.706
Cell_Division_Subsystem_including_YidCD	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229940.peg.2300
Cell_Division_Subsystem_including_YidCD	DNA recombination and repair protein RecF	fig|6666666.229940.peg.1187
Cell_Division_Subsystem_including_YidCD	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229940.peg.1127
Cell_Division_Subsystem_including_YidCD	Inner membrane protein translocase component YidC, long form	fig|6666666.229940.peg.1355
Cell_Division_Subsystem_including_YidCD	LSU ribosomal protein L34p	fig|6666666.229940.peg.511
Cell_Division_Subsystem_including_YidCD	Protein YidD	fig|6666666.229940.peg.1167
Cell_Division_Subsystem_including_YidCD	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229940.peg.1168
Cell_Division_Subsystem_including_YidCD	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229940.peg.1453
Cell_Division_Subsystem_including_YidCD	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229940.peg.1799
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229940.peg.1238
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229940.peg.1496
Cell_division-ribosomal_stress_proteins_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229940.peg.2113
Cell_division-ribosomal_stress_proteins_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229940.peg.123
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229940.peg.1508
Cell_division-ribosomal_stress_proteins_cluster	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229940.peg.2103
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229940.peg.1509
Cell_division-ribosomal_stress_proteins_cluster	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229940.peg.2104
Cell_division-ribosomal_stress_proteins_cluster	SSU ribosomal protein S1p	fig|6666666.229940.peg.778
Cell_division-ribosomal_stress_proteins_cluster	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229940.peg.994
Cell_division-ribosomal_stress_proteins_cluster	Transcription-repair coupling factor	fig|6666666.229940.peg.2143
Cell_division-ribosomal_stress_proteins_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229940.peg.1309
Cellulosome	1,4-alpha-glucan branching enzyme (EC 2.4.1.18)	fig|6666666.229940.peg.946
Cellulosome	1,4-alpha-glucan branching enzyme (EC 2.4.1.18)	fig|6666666.229940.peg.1448
Cellulosome	Alpha-glucosidase SusB (EC 3.2.1.20)	fig|6666666.229940.peg.2706
Cellulosome	Outer membrane protein SusF	fig|6666666.229940.peg.2709
Cellulosome	Regulatory protein SusR	fig|6666666.229940.peg.856
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.38
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.163
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.721
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.973
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.1175
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.1246
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.1347
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.1398
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.1672
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.2005
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.2013
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.2257
Cellulosome	SusC, outer membrane protein involved in starch binding	fig|6666666.229940.peg.2707
Cellulosome	SusD, outer membrane protein	fig|6666666.229940.peg.1348
Cellulosome	SusD, outer membrane protein	fig|6666666.229940.peg.2708
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229940.peg.900
Chitin_and_N-acetylglucosamine_utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229940.peg.2755
Chitin_and_N-acetylglucosamine_utilization	Chitin binding protein	fig|6666666.229940.peg.1161
Chitin_and_N-acetylglucosamine_utilization	Chitin binding protein	fig|6666666.229940.peg.1444
Chitin_and_N-acetylglucosamine_utilization	Chitin binding protein	fig|6666666.229940.peg.1787
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229940.peg.804
Chitin_and_N-acetylglucosamine_utilization	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	fig|6666666.229940.peg.1572
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine related transporter, NagX	fig|6666666.229940.peg.1680
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine related transporter, NagX	fig|6666666.229940.peg.2016
Chitin_and_N-acetylglucosamine_utilization	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)	fig|6666666.229940.peg.2314
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Choline-sulfatase (EC 3.1.6.6)	fig|6666666.229940.peg.1485
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Choline-sulfatase (EC 3.1.6.6)	fig|6666666.229940.peg.1721
Choline_and_Betaine_Uptake_and_Betaine_Biosynthesis	Choline-sulfatase (EC 3.1.6.6)	fig|6666666.229940.peg.2687
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229940.peg.336
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Anthranilate synthase, amidotransferase component (EC 4.1.3.27)	fig|6666666.229940.peg.338
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Isochorismate synthase (EC 5.4.4.2)	fig|6666666.229940.peg.924
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229940.peg.338
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229940.peg.337
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain like (EC 4.2.1.20)	fig|6666666.229940.peg.1760
Chorismate:_Intermediate_for_synthesis_of_Tryptophan,_PAPA_antibiotics,_PABA,_3-hydroxyanthranilate_and_more.	Tryptophan synthase beta chain like (EC 4.2.1.20)	fig|6666666.229940.peg.2321
Chorismate_Synthesis	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)	fig|6666666.229940.peg.693
Chorismate_Synthesis	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229940.peg.1957
Chorismate_Synthesis	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229940.peg.1719
Chorismate_Synthesis	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229940.peg.2492
Chorismate_Synthesis	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229940.peg.693
Chorismate_Synthesis	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229940.peg.983
Chorismate_Synthesis	Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229940.peg.692
Chorismate_Synthesis	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.229940.peg.695
Chorismate_Synthesis	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229940.peg.2572
Chorismate_Synthesis	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229940.peg.758
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatA	fig|6666666.229940.peg.1618
Cluster-based_Subsystem_Grouping_Hypotheticals_-_perhaps_Proteosome_Related	Twin-arginine translocation protein TatC	fig|6666666.229940.peg.1619
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229940.peg.1341
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229940.peg.1342
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229940.peg.1718
Cluster_containing_Alanyl-tRNA_synthetase	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229940.peg.2763
Cluster_containing_Alanyl-tRNA_synthetase	FIG004453: protein YceG like	fig|6666666.229940.peg.12
Cluster_containing_Alanyl-tRNA_synthetase	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229940.peg.2572
Cobalamin_synthesis	Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	fig|6666666.229940.peg.1082
Cobalamin_synthesis	Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)	fig|6666666.229940.peg.838
Cobalamin_synthesis	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229940.peg.2458
Cobalamin_synthesis	Cobalamin biosynthesis protein CbiG	fig|6666666.229940.peg.1382
Cobalamin_synthesis	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)	fig|6666666.229940.peg.2017
Cobalamin_synthesis	Cobalt-precorrin-3b C17-methyltransferase	fig|6666666.229940.peg.1380
Cobalamin_synthesis	Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	fig|6666666.229940.peg.1382
Cobalamin_synthesis	Cobalt-precorrin-6 synthase, anaerobic	fig|6666666.229940.peg.1383
Cobalamin_synthesis	Cobalt-precorrin-6x reductase (EC 1.3.1.54)	fig|6666666.229940.peg.1383
Cobalamin_synthesis	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)	fig|6666666.229940.peg.1380
Cobalamin_synthesis	Cobyric acid synthase (EC 6.3.5.10)	fig|6666666.229940.peg.837
Cobalamin_synthesis	Cobyrinic acid A,C-diamide synthase	fig|6666666.229940.peg.1666
Cobalamin_synthesis	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)	fig|6666666.229940.peg.839
Cobalamin_synthesis	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)	fig|6666666.229940.peg.2460
Cobalamin_synthesis	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)	fig|6666666.229940.peg.2749
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.229940.peg.1388
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.229940.peg.1559
Cobalt-zinc-cadmium_resistance	Cation efflux system protein CusA	fig|6666666.229940.peg.2247
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein	fig|6666666.229940.peg.2093
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.229940.peg.1388
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.229940.peg.1559
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcA	fig|6666666.229940.peg.2247
Cobalt-zinc-cadmium_resistance	Cobalt-zinc-cadmium resistance protein CzcD	fig|6666666.229940.peg.646
Cobalt-zinc-cadmium_resistance	Heavy metal RND efflux outer membrane protein, CzcC family	fig|6666666.229940.peg.1560
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229940.peg.1389
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229940.peg.1768
Cobalt-zinc-cadmium_resistance	Probable Co/Zn/Cd efflux system membrane fusion protein	fig|6666666.229940.peg.2240
Coenzyme_A_Biosynthesis	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.229940.peg.1813
Coenzyme_A_Biosynthesis	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.229940.peg.2200
Coenzyme_A_Biosynthesis	Dephospho-CoA kinase (EC 2.7.1.24)	fig|6666666.229940.peg.1858
Coenzyme_A_Biosynthesis	Ketol-acid reductoisomerase (EC 1.1.1.86)	fig|6666666.229940.peg.1656
Coenzyme_A_Biosynthesis	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.229940.peg.2201
Coenzyme_A_Biosynthesis	Pantothenate kinase (EC 2.7.1.33)	fig|6666666.229940.peg.2719
Coenzyme_A_Biosynthesis	Phosphopantetheine adenylyltransferase (EC 2.7.7.3)	fig|6666666.229940.peg.227
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)	fig|6666666.229940.peg.2302
Coenzyme_A_Biosynthesis	Phosphopantothenoylcysteine synthetase (EC 6.3.2.5)	fig|6666666.229940.peg.2302
Coenzyme_A_Biosynthesis_cluster	3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)	fig|6666666.229940.peg.1813
Coenzyme_A_Biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.229940.peg.2200
Coenzyme_A_Biosynthesis_cluster	FIG137884: hypothetical protein	fig|6666666.229940.peg.1602
Coenzyme_A_Biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.229940.peg.2201
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229940.peg.679
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229940.peg.694
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229940.peg.2355
Coenzyme_M_biosynthesis_--_gjo	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229940.peg.2358
Colanic_acid_biosynthesis	GDP-L-fucose synthetase (EC 1.1.1.271)	fig|6666666.229940.peg.1505
Colanic_acid_biosynthesis	GDP-mannose 4,6-dehydratase (EC 4.2.1.47)	fig|6666666.229940.peg.1506
Colanic_acid_biosynthesis	Lipopolysaccharide biosynthesis protein WzxC	fig|6666666.229940.peg.233
Colanic_acid_biosynthesis	Tyrosine-protein kinase Wzc (EC 2.7.10.2)	fig|6666666.229940.peg.1144
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)	fig|6666666.229940.peg.693
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229940.peg.1957
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	3-dehydroquinate synthase (EC 4.2.3.4)	fig|6666666.229940.peg.1719
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)	fig|6666666.229940.peg.2492
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Chorismate synthase (EC 4.2.3.5)	fig|6666666.229940.peg.983
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)	fig|6666666.229940.peg.2572
Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)	Shikimate kinase I (EC 2.7.1.71)	fig|6666666.229940.peg.758
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraA	fig|6666666.229940.peg.1278
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraB	fig|6666666.229940.peg.526
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraD	fig|6666666.229940.peg.1276
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraE	fig|6666666.229940.peg.1275
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraF	fig|6666666.229940.peg.1274
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraG	fig|6666666.229940.peg.1273
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraI	fig|6666666.229940.peg.1272
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraJ	fig|6666666.229940.peg.1271
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraK	fig|6666666.229940.peg.1270
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraM	fig|6666666.229940.peg.1268
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraN	fig|6666666.229940.peg.1267
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraO	fig|6666666.229940.peg.1266
Conjugative_transposon,_Bacteroidales	Conjugative transposon protein TraQ	fig|6666666.229940.peg.1265
Conjugative_transposon,_Bacteroidales	Putative conjugative transposon mobilization protein BF0132	fig|6666666.229940.peg.1280
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.229940.peg.1281
Conjugative_transposon,_Bacteroidales	Putative mobilization protein BF0133	fig|6666666.229940.peg.2672
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.229940.peg.189
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.229940.peg.528
Conjugative_transposon,_Bacteroidales	hypothetical protein clusted with conjugative transposons, BF0131	fig|6666666.229940.peg.1279
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229940.peg.787
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229940.peg.659
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Helicase PriA essential for oriC/DnaA-independent DNA replication	fig|6666666.229940.peg.1574
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229940.peg.738
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229940.peg.1942
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Protein serine/threonine phosphatase PrpC, regulation of stationary phase	fig|6666666.229940.peg.2603
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229940.peg.702
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229940.peg.1932
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229940.peg.2288
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake	fig|6666666.229940.peg.1757
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	Trk system potassium uptake protein TrkA	fig|6666666.229940.peg.1115
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229940.peg.93
Conserved_gene_cluster_associated_with_Met-tRNA_formyltransferase	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229940.peg.2428
Conserved_gene_cluster_possibly_involved_in_RNA_metabolism	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229940.peg.447
Control_of_cell_elongation_-_division_cycle_in_Bacilli	Endonuclease III (EC 4.2.99.18)	fig|6666666.229940.peg.745
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229940.peg.490
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229940.peg.2685
D-Galacturonate_and_D-Glucuronate_Utilization	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229940.peg.2683
D-Galacturonate_and_D-Glucuronate_Utilization	2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	fig|6666666.229940.peg.2684
D-Galacturonate_and_D-Glucuronate_Utilization	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)	fig|6666666.229940.peg.2689
D-Galacturonate_and_D-Glucuronate_Utilization	D-mannonate oxidoreductase (EC 1.1.1.57)	fig|6666666.229940.peg.491
D-Galacturonate_and_D-Glucuronate_Utilization	Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	fig|6666666.229940.peg.2007
D-Galacturonate_and_D-Glucuronate_Utilization	Hexuronate transporter	fig|6666666.229940.peg.2682
D-Galacturonate_and_D-Glucuronate_Utilization	Polygalacturonase (EC 3.2.1.15)	fig|6666666.229940.peg.1090
D-Galacturonate_and_D-Glucuronate_Utilization	Uronate isomerase (EC 5.3.1.12)	fig|6666666.229940.peg.1229
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229940.peg.215
D-Tagatose_and_Galactitol_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229940.peg.1230
D-gluconate_and_ketogluconates_metabolism	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229940.peg.490
D-gluconate_and_ketogluconates_metabolism	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229940.peg.2685
D-gluconate_and_ketogluconates_metabolism	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.229940.peg.385
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.229940.peg.2630
D-ribose_utilization	Ribokinase (EC 2.7.1.15)	fig|6666666.229940.peg.2724
D-ribose_utilization	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229940.peg.2274
DNA_Repair_Base_Excision	DNA ligase (EC 6.5.1.2)	fig|6666666.229940.peg.1823
DNA_Repair_Base_Excision	DNA polymerase I (EC 2.7.7.7)	fig|6666666.229940.peg.296
DNA_Repair_Base_Excision	Endonuclease III (EC 4.2.99.18)	fig|6666666.229940.peg.745
DNA_Repair_Base_Excision	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229940.peg.735
DNA_Repair_Base_Excision	Uracil-DNA glycosylase, family 1	fig|6666666.229940.peg.140
DNA_gyrase_subunits	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229940.peg.1456
DNA_gyrase_subunits	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229940.peg.706
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229940.peg.1497
DNA_processing_cluster	DNA polymerase III subunits gamma and tau (EC 2.7.7.7)	fig|6666666.229940.peg.1499
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229940.peg.1288
DNA_processing_cluster	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229940.peg.2416
DNA_processing_cluster	Recombination protein RecR	fig|6666666.229940.peg.145
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A	fig|6666666.229940.peg.22
DNA_repair,_UvrABC_system	Excinuclease ABC subunit A paralog in greater Bacteroides group	fig|6666666.229940.peg.261
DNA_repair,_UvrABC_system	Excinuclease ABC subunit B	fig|6666666.229940.peg.1129
DNA_repair,_UvrABC_system	Excinuclease ABC subunit C	fig|6666666.229940.peg.1798
DNA_repair,_bacterial	A/G-specific adenine glycosylase (EC 3.2.2.-)	fig|6666666.229940.peg.2536
DNA_repair,_bacterial	DNA repair protein RadA	fig|6666666.229940.peg.1607
DNA_repair,_bacterial	DNA repair protein RadC	fig|6666666.229940.peg.1987
DNA_repair,_bacterial	DNA repair protein RecN	fig|6666666.229940.peg.2304
DNA_repair,_bacterial	Endonuclease IV (EC 3.1.21.2)	fig|6666666.229940.peg.941
DNA_repair,_bacterial	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229940.peg.1041
DNA_repair,_bacterial	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229940.peg.1042
DNA_repair,_bacterial	Exonuclease SbcC	fig|6666666.229940.peg.1068
DNA_repair,_bacterial	Exonuclease SbcD	fig|6666666.229940.peg.1067
DNA_repair,_bacterial	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229940.peg.1345
DNA_repair,_bacterial	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	fig|6666666.229940.peg.310
DNA_repair,_bacterial	RecA protein	fig|6666666.229940.peg.2335
DNA_repair,_bacterial	Single-stranded DNA-binding protein	fig|6666666.229940.peg.2537
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutL	fig|6666666.229940.peg.2650
DNA_repair,_bacterial_MutL-MutS_system	DNA mismatch repair protein MutS	fig|6666666.229940.peg.595
DNA_repair,_bacterial_MutL-MutS_system	MutS-related protein, family 1	fig|6666666.229940.peg.1357
DNA_repair,_bacterial_MutL-MutS_system	Recombination inhibitory protein MutS2	fig|6666666.229940.peg.2135
DNA_repair,_bacterial_RecBCD_pathway	RecD-like DNA helicase Atu2026	fig|6666666.229940.peg.829
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229940.peg.158
DNA_repair,_bacterial_RecFOR_pathway	ATP-dependent DNA helicase RecQ	fig|6666666.229940.peg.2644
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecF	fig|6666666.229940.peg.1187
DNA_repair,_bacterial_RecFOR_pathway	DNA recombination and repair protein RecO	fig|6666666.229940.peg.903
DNA_repair,_bacterial_RecFOR_pathway	RecA protein	fig|6666666.229940.peg.2335
DNA_repair,_bacterial_RecFOR_pathway	Recombination protein RecR	fig|6666666.229940.peg.145
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded DNA-binding protein	fig|6666666.229940.peg.2537
DNA_repair,_bacterial_RecFOR_pathway	Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)	fig|6666666.229940.peg.735
DNA_repair,_bacterial_UmuCD_system	RecA protein	fig|6666666.229940.peg.2335
DNA_repair,_bacterial_UvrD_and_related_helicases	ATP-dependent DNA helicase UvrD/PcrA	fig|6666666.229940.peg.2121
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	DNA mismatch repair protein MutS	fig|6666666.229940.peg.595
DNA_repair_system_including_RecA,_MutS_and_a_hypothetical_protein	RecA protein	fig|6666666.229940.peg.2335
DNA_replication,_archaeal	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229940.peg.702
DNA_replication_cluster_1	Chromosomal replication initiator protein DnaA	fig|6666666.229940.peg.1641
DNA_replication_cluster_1	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229940.peg.1456
DNA_replication_cluster_1	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229940.peg.706
DNA_replication_cluster_1	DNA polymerase III beta subunit (EC 2.7.7.7)	fig|6666666.229940.peg.2300
DNA_replication_cluster_1	DNA recombination and repair protein RecF	fig|6666666.229940.peg.1187
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229940.peg.1509
DNA_replication_cluster_1	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229940.peg.2104
DNA_replication_cluster_1	Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives	fig|6666666.229940.peg.1188
DNA_structural_proteins,_bacterial	DNA-binding protein HU	fig|6666666.229940.peg.2535
DNA_structural_proteins,_bacterial	DNA-binding protein HU-beta	fig|6666666.229940.peg.2120
DNA_structural_proteins,_bacterial	Integration host factor alpha/beta	fig|6666666.229940.peg.1470
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229940.peg.659
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229940.peg.1288
DNA_topoisomerases,_Type_I,_ATP-independent	DNA topoisomerase III (EC 5.99.1.2)	fig|6666666.229940.peg.2416
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229940.peg.1456
DNA_topoisomerases,_Type_II,_ATP-dependent	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229940.peg.706
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229940.peg.1704
DNA_topoisomerases,_Type_II,_ATP-dependent	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229940.peg.226
De_Novo_Purine_Biosynthesis	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229940.peg.346
De_Novo_Purine_Biosynthesis	Amidophosphoribosyltransferase (EC 2.4.2.14)	fig|6666666.229940.peg.1384
De_Novo_Purine_Biosynthesis	IMP cyclohydrolase (EC 3.5.4.10)	fig|6666666.229940.peg.1625
De_Novo_Purine_Biosynthesis	Phosphoribosylamine--glycine ligase (EC 6.3.4.13)	fig|6666666.229940.peg.1900
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)	fig|6666666.229940.peg.1197
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	fig|6666666.229940.peg.2574
De_Novo_Purine_Biosynthesis	Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)	fig|6666666.229940.peg.1625
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)	fig|6666666.229940.peg.2035
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	fig|6666666.229940.peg.965
De_Novo_Purine_Biosynthesis	Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3)	fig|6666666.229940.peg.965
De_Novo_Purine_Biosynthesis	Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)	fig|6666666.229940.peg.220
De_Novo_Purine_Biosynthesis	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229940.peg.612
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase (EC 2.1.3.2)	fig|6666666.229940.peg.2433
De_Novo_Pyrimidine_Synthesis	Aspartate carbamoyltransferase regulatory chain (PyrI)	fig|6666666.229940.peg.2432
De_Novo_Pyrimidine_Synthesis	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.229940.peg.160
De_Novo_Pyrimidine_Synthesis	Dihydroorotase (EC 3.5.2.3)	fig|6666666.229940.peg.32
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)	fig|6666666.229940.peg.1658
De_Novo_Pyrimidine_Synthesis	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)	fig|6666666.229940.peg.1659
De_Novo_Pyrimidine_Synthesis	Orotate phosphoribosyltransferase (EC 2.4.2.10)	fig|6666666.229940.peg.1073
De_Novo_Pyrimidine_Synthesis	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	fig|6666666.229940.peg.2037
De_Novo_Pyrimidine_Synthesis	Uracil permease	fig|6666666.229940.peg.298
De_Novo_Pyrimidine_Synthesis	Uracil phosphoribosyltransferase (EC 2.4.2.9)	fig|6666666.229940.peg.297
Deoxyribose_and_Deoxynucleoside_Catabolism	Deoxyribose-phosphate aldolase (EC 4.1.2.4)	fig|6666666.229940.peg.1226
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229940.peg.2045
Deoxyribose_and_Deoxynucleoside_Catabolism	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229940.peg.2180
Deoxyribose_and_Deoxynucleoside_Catabolism	Putative deoxyribonuclease YjjV	fig|6666666.229940.peg.1166
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.229940.peg.2630
Deoxyribose_and_Deoxynucleoside_Catabolism	Ribokinase (EC 2.7.1.15)	fig|6666666.229940.peg.2724
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229940.peg.260
Dipeptidases_(EC_3.4.13.-)	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229940.peg.2311
ECSIG4-SIG7	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.229940.peg.1930
ECSIG4-SIG7	Organic solvent tolerance protein precursor	fig|6666666.229940.peg.139
ECSIG4-SIG7	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229940.peg.2020
ECSIG4-SIG7	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229940.peg.2645
ECSIG4-SIG7	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229940.peg.2647
Entner-Doudoroff_Pathway	2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229940.peg.599
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229940.peg.490
Entner-Doudoroff_Pathway	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	fig|6666666.229940.peg.2685
Entner-Doudoroff_Pathway	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	fig|6666666.229940.peg.2683
Entner-Doudoroff_Pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.229940.peg.399
Entner-Doudoroff_Pathway	Enolase (EC 4.2.1.11)	fig|6666666.229940.peg.1908
Entner-Doudoroff_Pathway	Glucokinase (EC 2.7.1.2)	fig|6666666.229940.peg.305
Entner-Doudoroff_Pathway	Gluconolactonase (EC 3.1.1.17)	fig|6666666.229940.peg.596
Entner-Doudoroff_Pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.229940.peg.400
Entner-Doudoroff_Pathway	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229940.peg.2152
Entner-Doudoroff_Pathway	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229940.peg.1807
Entner-Doudoroff_Pathway	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229940.peg.1958
Ethanolamine_utilization	Acetate kinase (EC 2.7.2.1)	fig|6666666.229940.peg.1248
Ethanolamine_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229940.peg.1249
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229940.peg.2242
Ethylmalonyl-CoA_pathway_of_C2_assimilation,_GJO	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229940.peg.2244
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 1 family protein	fig|6666666.229940.peg.255
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.229940.peg.144
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.229940.peg.256
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.229940.peg.943
Exopolysaccharide_Biosynthesis	Glycosyl transferase, group 2 family protein	fig|6666666.229940.peg.2010
Extracellular_Polysaccharide_Biosynthesis_of_Streptococci	Polysaccharide biosynthesis protein CpsM(V)	fig|6666666.229940.peg.1142
Fermentations:_Lactate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229940.peg.1248
Fermentations:_Lactate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229940.peg.1249
Fermentations:_Mixed_acid	Acetate kinase (EC 2.7.2.1)	fig|6666666.229940.peg.1248
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229940.peg.358
Fermentations:_Mixed_acid	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229940.peg.2659
Fermentations:_Mixed_acid	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229940.peg.1249
Fermentations:_Mixed_acid	Pyruvate formate-lyase (EC 2.3.1.54)	fig|6666666.229940.peg.335
Fermentations:_Mixed_acid	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)	fig|6666666.229940.peg.332
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.229940.peg.1195
Flagellar_motility	RNA polymerase sigma-54 factor RpoN	fig|6666666.229940.peg.2129
Flagellum	RNA polymerase sigma factor RpoD	fig|6666666.229940.peg.2290
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.229940.peg.1195
Flagellum	RNA polymerase sigma-54 factor RpoN	fig|6666666.229940.peg.2129
Flagellum_in_Campylobacter	Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)	fig|6666666.229940.peg.2269
Flavodoxin	Flavodoxin	fig|6666666.229940.peg.2739
Flavodoxin	Flavodoxin 1	fig|6666666.229940.peg.1910
Folate_Biosynthesis	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.229940.peg.766
Folate_Biosynthesis	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229940.peg.1189
Folate_Biosynthesis	Aminodeoxychorismate lyase (EC 4.1.3.38)	fig|6666666.229940.peg.336
Folate_Biosynthesis	Dihydrofolate reductase (EC 1.5.1.3)	fig|6666666.229940.peg.301
Folate_Biosynthesis	Dihydrofolate synthase (EC 6.3.2.12)	fig|6666666.229940.peg.2091
Folate_Biosynthesis	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.229940.peg.2119
Folate_Biosynthesis	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.229940.peg.1251
Folate_Biosynthesis	Folylpolyglutamate synthase (EC 6.3.2.17)	fig|6666666.229940.peg.2091
Folate_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229940.peg.57
Folate_Biosynthesis	Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)	fig|6666666.229940.peg.338
Folate_Biosynthesis	Para-aminobenzoate synthase, aminase component (EC 2.6.1.85)	fig|6666666.229940.peg.337
Folate_Biosynthesis	Thymidylate synthase (EC 2.1.1.45)	fig|6666666.229940.peg.300
Folate_biosynthesis_cluster	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3)	fig|6666666.229940.peg.766
Folate_biosynthesis_cluster	Aspartate 1-decarboxylase (EC 4.1.1.11)	fig|6666666.229940.peg.2200
Folate_biosynthesis_cluster	Cell division protein FtsH (EC 3.4.24.-)	fig|6666666.229940.peg.2113
Folate_biosynthesis_cluster	Dihydroneopterin aldolase (EC 4.1.2.25)	fig|6666666.229940.peg.2119
Folate_biosynthesis_cluster	Dihydropteroate synthase (EC 2.5.1.15)	fig|6666666.229940.peg.1251
Folate_biosynthesis_cluster	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229940.peg.57
Folate_biosynthesis_cluster	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229940.peg.123
Folate_biosynthesis_cluster	Pantoate--beta-alanine ligase (EC 6.3.2.1)	fig|6666666.229940.peg.2201
Folate_biosynthesis_cluster	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229940.peg.1309
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229940.peg.2023
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Beta-glucosidase (EC 3.2.1.21)	fig|6666666.229940.peg.587
Fructooligosaccharides(FOS)_and_Raffinose_Utilization	Beta-glucosidase (EC 3.2.1.21)	fig|6666666.229940.peg.588
Fructose_utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.229940.peg.262
Fructose_utilization	Transaldolase (EC 2.2.1.2)	fig|6666666.229940.peg.1104
Galactosylceramide_and_Sulfatide_metabolism	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229940.peg.2023
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.393
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.500
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.2029
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.2184
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.2319
Galactosylceramide_and_Sulfatide_metabolism	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.2589
Galactosylceramide_and_Sulfatide_metabolism	Neuraminidase NanP	fig|6666666.229940.peg.1177
Galactosylceramide_and_Sulfatide_metabolism	Sialidase (EC 3.2.1.18)	fig|6666666.229940.peg.2756
Galactosylceramide_and_Sulfatide_metabolism	probable beta-D-galactosidase	fig|6666666.229940.peg.388
Gentisate_degradation	Fumarylacetoacetate hydrolase family protein	fig|6666666.229940.peg.505
Glutamate_and_Aspartate_uptake_in_Bacteria	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.229940.peg.247
Glutamate_dehydrogenases	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229940.peg.1203
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)	fig|6666666.229940.peg.247
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229940.peg.679
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229940.peg.694
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229940.peg.2355
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229940.peg.2358
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate ammonia-lyase (EC 4.3.1.1)	fig|6666666.229940.peg.767
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Aspartate--ammonia ligase (EC 6.3.1.1)	fig|6666666.229940.peg.1039
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229940.peg.1970
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229940.peg.540
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229940.peg.861
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	fig|6666666.229940.peg.1998
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	fig|6666666.229940.peg.328
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutaminase (EC 3.5.1.2)	fig|6666666.229940.peg.644
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type III, GlnN (EC 6.3.1.2)	fig|6666666.229940.peg.1038
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	Glutamine synthetase type III, GlnN (EC 6.3.1.2)	fig|6666666.229940.peg.2097
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	L-asparaginase (EC 3.5.1.1)	fig|6666666.229940.peg.1854
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229940.peg.1203
Glutamine_synthetases	Glutamine synthetase type III, GlnN (EC 6.3.1.2)	fig|6666666.229940.peg.1038
Glutamine_synthetases	Glutamine synthetase type III, GlnN (EC 6.3.1.2)	fig|6666666.229940.peg.2097
Glutaredoxins	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229940.peg.2072
Glutathione:_Biosynthesis_and_gamma-glutamyl_cycle	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229940.peg.479
Glutathione:_Non-redox_reactions	Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis	fig|6666666.229940.peg.1452
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)	fig|6666666.229940.peg.1646
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229940.peg.219
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein	fig|6666666.229940.peg.449
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Acyl carrier protein (ACP1)	fig|6666666.229940.peg.456
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229940.peg.358
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Alcohol dehydrogenase (EC 1.1.1.1)	fig|6666666.229940.peg.2659
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)	fig|6666666.229940.peg.2564
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8)	fig|6666666.229940.peg.881
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Cardiolipin synthetase (EC 2.7.8.-)	fig|6666666.229940.peg.825
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Diacylglycerol kinase (EC 2.7.1.107)	fig|6666666.229940.peg.2694
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)	fig|6666666.229940.peg.1632
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidate cytidylyltransferase (EC 2.7.7.41)	fig|6666666.229940.peg.2114
Glycerolipid_and_Glycerophospholipid_Metabolism_in_Bacteria	Phosphatidylserine decarboxylase (EC 4.1.1.65)	fig|6666666.229940.peg.880
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229940.peg.207
Glycine_Biosynthesis	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229940.peg.2611
Glycine_Biosynthesis	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229940.peg.2547
Glycine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229940.peg.901
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229940.peg.207
Glycine_and_Serine_Utilization	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	fig|6666666.229940.peg.2611
Glycine_and_Serine_Utilization	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229940.peg.2555
Glycine_and_Serine_Utilization	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229940.peg.1843
Glycine_and_Serine_Utilization	Glycine cleavage system H protein	fig|6666666.229940.peg.1196
Glycine_and_Serine_Utilization	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.229940.peg.1451
Glycine_and_Serine_Utilization	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.229940.peg.743
Glycine_and_Serine_Utilization	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229940.peg.1845
Glycine_and_Serine_Utilization	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229940.peg.2470
Glycine_and_Serine_Utilization	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229940.peg.901
Glycine_and_Serine_Utilization	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229940.peg.869
Glycine_cleavage_system	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)	fig|6666666.229940.peg.2555
Glycine_cleavage_system	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229940.peg.2357
Glycine_cleavage_system	Glycine cleavage system H protein	fig|6666666.229940.peg.1196
Glycine_cleavage_system	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)	fig|6666666.229940.peg.1451
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229940.peg.725
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229940.peg.732
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin	fig|6666666.229940.peg.753
Glycine_reductase,_sarcosine_reductase_and_betaine_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229940.peg.1303
Glycogen_metabolism	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229940.peg.1773
Glycogen_metabolism	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229940.peg.2117
Glycogen_metabolism	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229940.peg.493
Glycogen_metabolism	Putative glycogen debranching enzyme, archaeal type, TIGR01561	fig|6666666.229940.peg.1864
Glycolate,_glyoxylate_interconversions	Glyoxylate reductase (EC 1.1.1.26)	fig|6666666.229940.peg.2496
Glycolate,_glyoxylate_interconversions	Glyoxylate reductase (EC 1.1.1.79)	fig|6666666.229940.peg.2496
Glycolate,_glyoxylate_interconversions	Hydroxypyruvate reductase (EC 1.1.1.81)	fig|6666666.229940.peg.2496
Glycolate,_glyoxylate_interconversions	Phosphoglycolate phosphatase (EC 3.1.3.18)	fig|6666666.229940.peg.2277
Glycolysis_and_Gluconeogenesis	2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229940.peg.599
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229940.peg.215
Glycolysis_and_Gluconeogenesis	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229940.peg.1230
Glycolysis_and_Gluconeogenesis	Enolase (EC 4.2.1.11)	fig|6666666.229940.peg.1908
Glycolysis_and_Gluconeogenesis	Fructose-bisphosphate aldolase class II (EC 4.1.2.13)	fig|6666666.229940.peg.1606
Glycolysis_and_Gluconeogenesis	Glucokinase (EC 2.7.1.2)	fig|6666666.229940.peg.305
Glycolysis_and_Gluconeogenesis	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229940.peg.1633
Glycolysis_and_Gluconeogenesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229940.peg.2152
Glycolysis_and_Gluconeogenesis	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229940.peg.1807
Glycolysis_and_Gluconeogenesis	Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)	fig|6666666.229940.peg.1804
Glycolysis_and_Gluconeogenesis	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229940.peg.1958
Glycolysis_and_Gluconeogenesis	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229940.peg.2597
Glycolysis_and_Gluconeogenesis	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229940.peg.59
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229940.peg.599
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229940.peg.215
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229940.peg.1230
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Enolase (EC 4.2.1.11)	fig|6666666.229940.peg.1908
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Glucose-6-phosphate isomerase (EC 5.3.1.9)	fig|6666666.229940.peg.1633
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Phosphoglycerate kinase (EC 2.7.2.3)	fig|6666666.229940.peg.1807
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229940.peg.1958
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229940.peg.2597
Glycolysis_and_Gluconeogenesis,_including_Archaeal_enzymes	Triosephosphate isomerase (EC 5.3.1.1)	fig|6666666.229940.peg.59
Glycyl-tRNA_synthetase_containing_cluster	DNA recombination and repair protein RecO	fig|6666666.229940.peg.903
Glycyl-tRNA_synthetase_containing_cluster	GTP-binding protein Era	fig|6666666.229940.peg.1085
Glycyl-tRNA_synthetase_containing_cluster	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229940.peg.419
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229940.peg.742
Glycyl-tRNA_synthetase_containing_cluster	Magnesium and cobalt efflux protein CorC	fig|6666666.229940.peg.2538
Glycyl-tRNA_synthetase_containing_cluster	Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly	fig|6666666.229940.peg.2498
Glycyl-tRNA_synthetase_containing_cluster	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229940.peg.2575
Glyoxylate_bypass	Malate dehydrogenase (EC 1.1.1.37)	fig|6666666.229940.peg.1112
GroEL_GroES	Chaperone protein DnaJ	fig|6666666.229940.peg.2132
GroEL_GroES	Chaperone protein DnaK	fig|6666666.229940.peg.568
GroEL_GroES	Heat shock protein 60 family chaperone GroEL	fig|6666666.229940.peg.1981
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229940.peg.330
GroEL_GroES	Heat shock protein 60 family co-chaperone GroES	fig|6666666.229940.peg.1982
GroEL_GroES	Heat shock protein GrpE	fig|6666666.229940.peg.2133
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaJ	fig|6666666.229940.peg.2132
Heat_shock_dnaK_gene_cluster_extended	Chaperone protein DnaK	fig|6666666.229940.peg.568
Heat_shock_dnaK_gene_cluster_extended	Heat shock protein GrpE	fig|6666666.229940.peg.2133
Heat_shock_dnaK_gene_cluster_extended	Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	fig|6666666.229940.peg.2372
Heat_shock_dnaK_gene_cluster_extended	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229940.peg.2502
Heat_shock_dnaK_gene_cluster_extended	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229940.peg.1566
Heat_shock_dnaK_gene_cluster_extended	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.229940.peg.2157
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229940.peg.1509
Heat_shock_dnaK_gene_cluster_extended	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	fig|6666666.229940.peg.2104
Heat_shock_dnaK_gene_cluster_extended	Signal peptidase-like protein	fig|6666666.229940.peg.1333
Heat_shock_dnaK_gene_cluster_extended	Translation elongation factor LepA	fig|6666666.229940.peg.2591
Heat_shock_dnaK_gene_cluster_extended	rRNA small subunit methyltransferase I	fig|6666666.229940.peg.832
Heat_shock_dnaK_gene_cluster_extended	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229940.peg.536
Heat_shock_dnaK_gene_cluster_extended	tmRNA-binding protein SmpB	fig|6666666.229940.peg.2616
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.229940.peg.2146
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Electron transfer flavoprotein, beta subunit	fig|6666666.229940.peg.2656
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229940.peg.1533
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229940.peg.2217
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229940.peg.2510
Heme,_hemin_uptake_and_utilization_systems_in_GramNegatives	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229940.peg.1219
Heme,_hemin_uptake_and_utilization_systems_in_GramPositives	FIG039061: hypothetical protein related to heme utilization	fig|6666666.229940.peg.1581
Heme_biosynthesis_orphans	Radical SAM domain heme biosynthesis protein	fig|6666666.229940.peg.1138
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229940.peg.1533
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229940.peg.2217
Hemin_transport_system	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229940.peg.2510
Hemin_transport_system	Outer membrane receptor proteins, mostly Fe transport	fig|6666666.229940.peg.1219
Hfl_operon	GTP-binding protein HflX	fig|6666666.229940.peg.883
Histidine_Degradation	Glutamate formiminotransferase (EC 2.1.2.5)	fig|6666666.229940.peg.1728
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.229940.peg.4
Histidine_Degradation	Histidine ammonia-lyase (EC 4.3.1.3)	fig|6666666.229940.peg.1732
Histidine_Degradation	Imidazolonepropionase (EC 3.5.2.7)	fig|6666666.229940.peg.1729
Histidine_Degradation	Urocanate hydratase (EC 4.2.1.49)	fig|6666666.229940.peg.1724
Housecleaning_nucleoside_triphosphate_pyrophosphatases	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.229940.peg.824
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229940.peg.2069
Housecleaning_nucleoside_triphosphate_pyrophosphatases	Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	fig|6666666.229940.peg.2502
Hyperosmotic_potassium_uptake	Potassium uptake protein TrkH	fig|6666666.229940.peg.1116
Hyperosmotic_potassium_uptake	Trk system potassium uptake protein TrkA	fig|6666666.229940.peg.1115
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)	fig|6666666.229940.peg.11
Indole-pyruvate_oxidoreductase_complex	Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)	fig|6666666.229940.peg.10
Iron-sulfur_cluster_assembly	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229940.peg.699
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.229940.peg.688
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufB	fig|6666666.229940.peg.687
Iron-sulfur_cluster_assembly	Iron-sulfur cluster assembly protein SufD	fig|6666666.229940.peg.689
Iron-sulfur_cluster_assembly	Nitric oxide-dependent regulator DnrN or NorA	fig|6666666.229940.peg.413
Iron-sulfur_cluster_assembly	PaaD-like protein (DUF59) involved in Fe-S cluster assembly	fig|6666666.229940.peg.1988
Iron-sulfur_cluster_assembly	Sulfur acceptor protein SufE for iron-sulfur cluster assembly	fig|6666666.229940.peg.703
Iron-sulfur_cluster_assembly	Thiamin biosynthesis lipoprotein ApbE	fig|6666666.229940.peg.2745
Isoleucine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229940.peg.1547
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229940.peg.295
Isoprenoid_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229940.peg.2511
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229940.peg.988
Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229940.peg.1114
Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229940.peg.1198
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229940.peg.843
Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229940.peg.1043
Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229940.peg.1418
Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229940.peg.2507
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229940.peg.2242
Isoprenoid_Biosynthesis	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229940.peg.2244
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229940.peg.295
Isoprenoid_Biosynthesis	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229940.peg.2511
Isoprenoid_Biosynthesis	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.229940.peg.674
Isoprenoid_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229940.peg.1974
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229940.peg.295
Isoprenoid_Biosynthesis:_Interconversions	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229940.peg.2511
Isoprenoid_Biosynthesis:_Interconversions	Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)	fig|6666666.229940.peg.674
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229940.peg.295
Isoprenoinds_for_Quinones	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229940.peg.2511
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229940.peg.295
Isoprenoinds_for_Quinones	Dimethylallyltransferase (EC 2.5.1.1)	fig|6666666.229940.peg.2511
Isoprenoinds_for_Quinones	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229940.peg.295
Isoprenoinds_for_Quinones	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229940.peg.1974
KH_domain_RNA_binding_protein_YlqC	16S rRNA processing protein RimM	fig|6666666.229940.peg.990
KH_domain_RNA_binding_protein_YlqC	SSU ribosomal protein S16p	fig|6666666.229940.peg.731
L-Arabinose_utilization	Alpha-N-arabinofuranosidase (EC 3.2.1.55)	fig|6666666.229940.peg.1529
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L10p (P0)	fig|6666666.229940.peg.918
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L11p (L12e)	fig|6666666.229940.peg.916
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229940.peg.917
LSU_ribosomal_proteins_cluster	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229940.peg.919
LSU_ribosomal_proteins_cluster	Preprotein translocase subunit SecE (TC 3.A.5.1.1)	fig|6666666.229940.peg.914
LSU_ribosomal_proteins_cluster	Transcription antitermination protein NusG	fig|6666666.229940.peg.915
Lactate_utilization	L-lactate permease	fig|6666666.229940.peg.1320
Lactate_utilization	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE	fig|6666666.229940.peg.1323
Lactate_utilization	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF	fig|6666666.229940.peg.1322
Lactate_utilization	Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518	fig|6666666.229940.peg.1321
Lacto-N-Biose_I_and_Galacto-N-Biose_Metabolic_Pathway	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229940.peg.2174
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229940.peg.997
Lactose_and_Galactose_Uptake_and_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229940.peg.1745
Lactose_and_Galactose_Uptake_and_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229940.peg.2023
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.393
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.500
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.2029
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.2184
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.2319
Lactose_and_Galactose_Uptake_and_Utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.2589
Lactose_and_Galactose_Uptake_and_Utilization	Galactokinase (EC 2.7.1.6)	fig|6666666.229940.peg.999
Lactose_and_Galactose_Uptake_and_Utilization	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229940.peg.2174
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.393
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.500
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.2029
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.2184
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.2319
Lactose_utilization	Beta-galactosidase (EC 3.2.1.23)	fig|6666666.229940.peg.2589
Lanthionine_Synthetases	Lanthionine biosynthesis cyclase LanC	fig|6666666.229940.peg.78
Lanthionine_Synthetases	Lanthionine biosynthesis cyclase LanC	fig|6666666.229940.peg.360
Lanthionine_Synthetases	Lanthionine biosynthesis cyclase LanC	fig|6666666.229940.peg.1686
Lanthionine_Synthetases	Lanthionine biosynthesis protein LanB	fig|6666666.229940.peg.356
Lanthionine_Synthetases	Lanthionine biosynthesis protein LanB	fig|6666666.229940.peg.357
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.229940.peg.252
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14)	fig|6666666.229940.peg.2332
Legionaminic_Acid_Biosynthesis	UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-)	fig|6666666.229940.peg.234
Leucine_Biosynthesis	2-isopropylmalate synthase (EC 2.3.3.13)	fig|6666666.229940.peg.1775
Leucine_Biosynthesis	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	fig|6666666.229940.peg.1776
Leucine_Biosynthesis	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	fig|6666666.229940.peg.1778
Leucine_Biosynthesis	3-isopropylmalate dehydrogenase (EC 1.1.1.85)	fig|6666666.229940.peg.1780
Leucine_Biosynthesis	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229940.peg.1547
Leucine_Degradation_and_HMG-CoA_Metabolism	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229940.peg.1547
Leucine_Degradation_and_HMG-CoA_Metabolism	Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	fig|6666666.229940.peg.2357
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase	fig|6666666.229940.peg.2701
Lipid_A-Ara4N_pathway_(_Polymyxin_resistance_)	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-)	fig|6666666.229940.peg.235
Lipid_A_modifications	UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide	fig|6666666.229940.peg.1758
Lipoic_acid_metabolism	Lipoate synthase	fig|6666666.229940.peg.673
Lipoic_acid_metabolism	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.229940.peg.1331
Lipoic_acid_synthesis_cluster	Lipoate synthase	fig|6666666.229940.peg.673
Lipoic_acid_synthesis_cluster	Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase	fig|6666666.229940.peg.1331
Lipoprotein_Biosynthesis	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229940.peg.2559
Lipoprotein_Biosynthesis	Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)	fig|6666666.229940.peg.807
Lipoprotein_sorting_system	Lipoprotein releasing system ATP-binding protein LolD	fig|6666666.229940.peg.1743
Lipoprotein_sorting_system	Lipoprotein releasing system transmembrane protein LolC	fig|6666666.229940.peg.1966
Listeria_Pathogenicity_Island_LIPI-1_extended	Zinc metalloproteinase precursor (EC 3.4.24.29)	fig|6666666.229940.peg.594
Llipid_A_biosynthesis_cluster	3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59)	fig|6666666.229940.peg.2040
Llipid_A_biosynthesis_cluster	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129)	fig|6666666.229940.peg.2041
Llipid_A_biosynthesis_cluster	FIG053235: Diacylglucosamine hydrolase like	fig|6666666.229940.peg.1035
Llipid_A_biosynthesis_cluster	Lipid-A-disaccharide synthase (EC 2.4.1.182)	fig|6666666.229940.peg.823
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.229940.peg.1971
Llipid_A_biosynthesis_cluster	Outer membrane protein H precursor	fig|6666666.229940.peg.1972
Llipid_A_biosynthesis_cluster	Outer membrane protein assembly factor YaeT precursor	fig|6666666.229940.peg.1973
Llipid_A_biosynthesis_cluster	UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54)	fig|6666666.229940.peg.1989
LysR-family_proteins_in_Escherichia_coli	Hydrogen peroxide-inducible genes activator	fig|6666666.229940.peg.2698
LysR-family_proteins_in_Salmonella_enterica_Typhimurium	Hydrogen peroxide-inducible genes activator	fig|6666666.229940.peg.2698
Lysine_Biosynthesis_DAP_Pathway	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.229940.peg.958
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.229940.peg.469
Lysine_Biosynthesis_DAP_Pathway	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.229940.peg.1821
Lysine_Biosynthesis_DAP_Pathway	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229940.peg.1217
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.229940.peg.1478
Lysine_Biosynthesis_DAP_Pathway	Aspartokinase (EC 2.7.2.4)	fig|6666666.229940.peg.1569
Lysine_Biosynthesis_DAP_Pathway	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229940.peg.1479
Lysine_Biosynthesis_DAP_Pathway	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.229940.peg.808
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)	fig|6666666.229940.peg.958
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8)	fig|6666666.229940.peg.469
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)	fig|6666666.229940.peg.1821
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229940.peg.1217
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.229940.peg.1478
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Aspartokinase (EC 2.7.2.4)	fig|6666666.229940.peg.1569
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Diaminopimelate decarboxylase (EC 4.1.1.20)	fig|6666666.229940.peg.1479
Lysine_Biosynthesis_DAP_Pathway,_GJO_scratch	Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16)	fig|6666666.229940.peg.808
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229940.peg.2242
Lysine_fermentation	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229940.peg.2244
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.229940.peg.2145
Lysine_fermentation	Electron transfer flavoprotein, alpha subunit	fig|6666666.229940.peg.2655
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.229940.peg.2146
Lysine_fermentation	Electron transfer flavoprotein, beta subunit	fig|6666666.229940.peg.2656
Lysine_fermentation	Lysine 2,3-aminomutase (EC 5.4.3.2)	fig|6666666.229940.peg.784
Macromolecular_synthesis_operon	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	fig|6666666.229940.peg.160
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229940.peg.574
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229940.peg.2080
Macromolecular_synthesis_operon	DNA primase (EC 2.7.7.-)	fig|6666666.229940.peg.2363
Macromolecular_synthesis_operon	RNA polymerase sigma factor RpoD	fig|6666666.229940.peg.2290
Macromolecular_synthesis_operon	SSU ribosomal protein S21p	fig|6666666.229940.peg.910
Macromolecular_synthesis_operon	Transamidase GatB domain protein	fig|6666666.229940.peg.2259
Macromolecular_synthesis_operon	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229940.peg.2428
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229940.peg.742
Magnesium_transport	Magnesium and cobalt efflux protein CorC	fig|6666666.229940.peg.2538
Magnesium_transport	Magnesium and cobalt transport protein CorA	fig|6666666.229940.peg.2019
Magnesium_transport	Mg(2+) transport ATPase protein C	fig|6666666.229940.peg.1662
Maltose_and_Maltodextrin_Utilization	4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)	fig|6666666.229940.peg.2117
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229940.peg.997
Maltose_and_Maltodextrin_Utilization	Aldose 1-epimerase (EC 5.1.3.3)	fig|6666666.229940.peg.1745
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.229940.peg.611
Maltose_and_Maltodextrin_Utilization	Alpha-amylase (EC 3.2.1.1)	fig|6666666.229940.peg.1866
Maltose_and_Maltodextrin_Utilization	Beta-phosphoglucomutase (EC 5.4.2.6)	fig|6666666.229940.peg.2320
Maltose_and_Maltodextrin_Utilization	Glycogen phosphorylase (EC 2.4.1.1)	fig|6666666.229940.peg.493
Maltose_and_Maltodextrin_Utilization	Maltose O-acetyltransferase (EC 2.3.1.79)	fig|6666666.229940.peg.1613
Maltose_and_Maltodextrin_Utilization	Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon	fig|6666666.229940.peg.751
Maltose_and_Maltodextrin_Utilization	Neopullulanase (EC 3.2.1.135)	fig|6666666.229940.peg.407
Maltose_and_Maltodextrin_Utilization	Predicted glucose transporter in maltodextrin utilization gene cluster	fig|6666666.229940.peg.998
Maltose_and_Maltodextrin_Utilization	Sugar phosphate isomerases/epimerases family protein YcjR	fig|6666666.229940.peg.414
Mannitol_Utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.229940.peg.262
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.229940.peg.1089
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.229940.peg.2197
Mannose_Metabolism	Alpha-1,2-mannosidase	fig|6666666.229940.peg.2571
Mannose_Metabolism	Beta-mannosidase (EC 3.2.1.25)	fig|6666666.229940.peg.1299
Mannose_Metabolism	Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)	fig|6666666.229940.peg.2568
Mannose_Metabolism	Mannose-6-phosphate isomerase (EC 5.3.1.8)	fig|6666666.229940.peg.1772
Mannose_Metabolism	Phosphomannomutase (EC 5.4.2.8)	fig|6666666.229940.peg.865
Melibiose_Utilization	Alpha-galactosidase (EC 3.2.1.22)	fig|6666666.229940.peg.2023
Menaquinone_Biosynthesis_via_Futalosine	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229940.peg.2573
Menaquinone_and_Phylloquinone_Biosynthesis	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.229940.peg.1526
Menaquinone_and_Phylloquinone_Biosynthesis	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.229940.peg.925
Menaquinone_and_Phylloquinone_Biosynthesis	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.229940.peg.924
Menaquinone_and_Phylloquinone_Biosynthesis	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.229940.peg.926
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229940.peg.927
Menaquinone_and_Phylloquinone_Biosynthesis	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.229940.peg.928
Menaquinone_and_Phylloquinone_Biosynthesis	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	fig|6666666.229940.peg.2573
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)	fig|6666666.229940.peg.1526
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)	fig|6666666.229940.peg.925
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Menaquinone-specific isochorismate synthase (EC 5.4.4.2)	fig|6666666.229940.peg.924
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	Naphthoate synthase (EC 4.1.3.36)	fig|6666666.229940.peg.926
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229940.peg.927
Menaquinone_and_Phylloquinone_Biosynthesis_--_gjo	O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)	fig|6666666.229940.peg.928
Metallocarboxypeptidases_(EC_3.4.17.-)	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229940.peg.224
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229940.peg.2268
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229940.peg.64
Methicillin_resistance_in_Staphylococci	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229940.peg.1252
Methionine_Degradation	Adenosylhomocysteinase (EC 3.3.1.1)	fig|6666666.229940.peg.1209
Methionine_Degradation	Methionine ABC transporter ATP-binding protein	fig|6666666.229940.peg.2377
Methionine_Degradation	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229940.peg.1544
Methionine_Degradation	S-adenosylmethionine synthetase (EC 2.5.1.6)	fig|6666666.229940.peg.2413
Methylglyoxal_Metabolism	Methylglyoxal synthase (EC 4.2.3.3)	fig|6666666.229940.peg.729
Methylthiotransferases	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229940.peg.1471
Methylthiotransferases	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229940.peg.394
Methylthiotransferases	tRNA-t(6)A37 methylthiotransferase	fig|6666666.229940.peg.536
Muconate_lactonizing_enzyme_family	L-alanine-DL-glutamate epimerase	fig|6666666.229940.peg.283
Muconate_lactonizing_enzyme_family	O-succinylbenzoate synthase (EC 4.2.1.113)	fig|6666666.229940.peg.927
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.229940.peg.1767
Multidrug_Resistance_Efflux_Pumps	Acriflavin resistance protein	fig|6666666.229940.peg.2250
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229940.peg.192
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229940.peg.531
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229940.peg.1436
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229940.peg.1806
Multidrug_Resistance_Efflux_Pumps	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229940.peg.2326
Murein_Hydrolases	D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)	fig|6666666.229940.peg.224
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229940.peg.23
Murein_Hydrolases	Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)	fig|6666666.229940.peg.1710
Murein_Hydrolases	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229940.peg.1638
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229940.peg.920
Mycobacterium_virulence_operon_involved_in_DNA_transcription	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229940.peg.921
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L20p	fig|6666666.229940.peg.2306
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	LSU ribosomal protein L35p	fig|6666666.229940.peg.2307
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(LSU_ribosomal_proteins)	Translation initiation factor 3	fig|6666666.229940.peg.2308
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S12p (S23e)	fig|6666666.229940.peg.2411
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	SSU ribosomal protein S7p (S5e)	fig|6666666.229940.peg.2410
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor G	fig|6666666.229940.peg.2409
Mycobacterium_virulence_operon_involved_in_protein_synthesis_(SSU_ribosomal_proteins)	Translation elongation factor Tu	fig|6666666.229940.peg.913
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.229940.peg.1172
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.229940.peg.956
Mycobacterium_virulence_operon_possibly_involved_in_quinolinate_biosynthesis	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.229940.peg.1747
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229940.peg.215
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	6-phosphofructokinase (EC 2.7.1.11)	fig|6666666.229940.peg.1230
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229940.peg.900
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-hexosaminidase (EC 3.2.1.52)	fig|6666666.229940.peg.2755
N-Acetyl-Galactosamine_and_Galactosamine_Utilization	Beta-phosphoglucomutase (EC 5.4.2.6)	fig|6666666.229940.peg.2320
N-linked_Glycosylation_in_Bacteria	UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-)	fig|6666666.229940.peg.234
N-linked_Glycosylation_in_Bacteria	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229940.peg.2174
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.229940.peg.2427
NAD_and_NADP_cofactor_biosynthesis_global	C-terminal domain of CinA type S	fig|6666666.229940.peg.2427
NAD_and_NADP_cofactor_biosynthesis_global	Glutamine amidotransferase chain of NAD synthetase	fig|6666666.229940.peg.1037
NAD_and_NADP_cofactor_biosynthesis_global	L-aspartate oxidase (EC 1.4.3.16)	fig|6666666.229940.peg.1172
NAD_and_NADP_cofactor_biosynthesis_global	NAD kinase (EC 2.7.1.23)	fig|6666666.229940.peg.1538
NAD_and_NADP_cofactor_biosynthesis_global	NAD synthetase (EC 6.3.1.5)	fig|6666666.229940.peg.1037
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229940.peg.149
NAD_and_NADP_cofactor_biosynthesis_global	Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	fig|6666666.229940.peg.1192
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19)	fig|6666666.229940.peg.956
NAD_and_NADP_cofactor_biosynthesis_global	Quinolinate synthetase (EC 2.5.1.72)	fig|6666666.229940.peg.1747
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfA	fig|6666666.229940.peg.1366
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfB	fig|6666666.229940.peg.1360
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfC	fig|6666666.229940.peg.1361
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfD	fig|6666666.229940.peg.1362
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfE	fig|6666666.229940.peg.1365
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Electron transport complex protein RnfG	fig|6666666.229940.peg.1363
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)	fig|6666666.229940.peg.131
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)	fig|6666666.229940.peg.132
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)	fig|6666666.229940.peg.133
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)	fig|6666666.229940.peg.134
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)	fig|6666666.229940.peg.135
Na(+)-translocating_NADH-quinone_oxidoreductase_and_rnf-like_group_of_electron_transport_complexes	Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)	fig|6666666.229940.peg.136
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase	fig|6666666.229940.peg.2519
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Membrane protein associated with methylmalonyl-CoA decarboxylase	fig|6666666.229940.peg.2520
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.229940.peg.2521
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.229940.peg.2518
Na+_translocating_decarboxylases_and_related_biotin-dependent_enzymes	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	fig|6666666.229940.peg.1319
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Na+/H+ antiporter NhaA type	fig|6666666.229940.peg.323
NhaA,_NhaD_and_Sodium-dependent_phosphate_transporters	Sodium-dependent phosphate transporter	fig|6666666.229940.peg.1228
Nitrosative_stress	Hcp transcriptional regulator HcpR (Crp/Fnr family)	fig|6666666.229940.peg.786
Nitrosative_stress	Hydroxylamine reductase (EC 1.7.-.-)	fig|6666666.229940.peg.780
Nitrosative_stress	Nitric oxide-dependent regulator DnrN or NorA	fig|6666666.229940.peg.413
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267)	fig|6666666.229940.peg.988
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229940.peg.1114
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1)	fig|6666666.229940.peg.1198
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229940.peg.843
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229940.peg.1043
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)	fig|6666666.229940.peg.1418
Nonmevalonate_Branch_of_Isoprenoid_Biosynthesis	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	fig|6666666.229940.peg.2507
Nucleoside_triphosphate_pyrophosphohydrolase_MazG	Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)	fig|6666666.229940.peg.2030
Nudix_proteins_(nucleoside_triphosphate_hydrolases)	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	fig|6666666.229940.peg.2069
NusA-TFII_Cluster	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229940.peg.683
NusA-TFII_Cluster	Ribosome-binding factor A	fig|6666666.229940.peg.1965
NusA-TFII_Cluster	Transcription termination protein NusA	fig|6666666.229940.peg.684
NusA-TFII_Cluster	Translation initiation factor 2	fig|6666666.229940.peg.685
One-carbon_metabolism_by_tetrahydropterines	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	fig|6666666.229940.peg.2324
One-carbon_metabolism_by_tetrahydropterines	5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)	fig|6666666.229940.peg.1189
One-carbon_metabolism_by_tetrahydropterines	Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4)	fig|6666666.229940.peg.1731
One-carbon_metabolism_by_tetrahydropterines	Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)	fig|6666666.229940.peg.2353
One-carbon_metabolism_by_tetrahydropterines	Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5)	fig|6666666.229940.peg.2353
Oxidative_stress	Ferroxidase (EC 1.16.3.1)	fig|6666666.229940.peg.2697
Oxidative_stress	Hydrogen peroxide-inducible genes activator	fig|6666666.229940.peg.2698
Oxidative_stress	Iron-binding ferritin-like antioxidant protein	fig|6666666.229940.peg.2697
Oxidative_stress	Non-specific DNA-binding protein Dps	fig|6666666.229940.peg.2697
Oxidative_stress	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	fig|6666666.229940.peg.506
Oxidative_stress	Superoxide dismutase [Fe] (EC 1.15.1.1)	fig|6666666.229940.peg.902
Oxidative_stress	transcriptional regulator, Crp/Fnr family	fig|6666666.229940.peg.2316
Oxidative_stress	transcriptional regulator, Fur family	fig|6666666.229940.peg.724
Oxidative_stress	transcriptional regulator, Fur family	fig|6666666.229940.peg.2058
Pentose_phosphate_pathway	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)	fig|6666666.229940.peg.385
Pentose_phosphate_pathway	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type	fig|6666666.229940.peg.399
Pentose_phosphate_pathway	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	fig|6666666.229940.peg.400
Pentose_phosphate_pathway	Ribose 5-phosphate isomerase B (EC 5.3.1.6)	fig|6666666.229940.peg.2274
Pentose_phosphate_pathway	Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)	fig|6666666.229940.peg.612
Pentose_phosphate_pathway	Ribulose-phosphate 3-epimerase (EC 5.1.3.1)	fig|6666666.229940.peg.2288
Pentose_phosphate_pathway	Transaldolase (EC 2.2.1.2)	fig|6666666.229940.peg.1104
Pentose_phosphate_pathway	Transketolase (EC 2.2.1.1)	fig|6666666.229940.peg.2275
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229940.peg.1761
Peptide_methionine_sulfoxide_reductase	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229940.peg.1761
Peptidoglycan_biosynthesis--gjo	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229940.peg.508
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229940.peg.2263
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9)	fig|6666666.229940.peg.2266
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13)	fig|6666666.229940.peg.2268
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229940.peg.64
Peptidoglycan_biosynthesis--gjo	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10)	fig|6666666.229940.peg.1252
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.229940.peg.48
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)	fig|6666666.229940.peg.49
Peptidyl-prolyl_cis-trans_isomerase	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229940.peg.982
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229940.peg.2645
Peptidyl-prolyl_cis-trans_isomerase	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229940.peg.2647
Periplasmic_Stress_Response	HtrA protease/chaperone protein	fig|6666666.229940.peg.2291
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229940.peg.1971
Periplasmic_Stress_Response	Outer membrane protein H precursor	fig|6666666.229940.peg.1972
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229940.peg.2645
Periplasmic_Stress_Response	Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)	fig|6666666.229940.peg.2647
Periplasmic_disulfide_interchange	Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	fig|6666666.229940.peg.2031
Persister_Cells	HipA protein	fig|6666666.229940.peg.1126
Phage_tail_fiber_proteins	Phage tail fibers	fig|6666666.229940.peg.2447
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57)	fig|6666666.229940.peg.694
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Chorismate mutase I (EC 5.4.99.5)	fig|6666666.229940.peg.693
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43)	fig|6666666.229940.peg.692
Phenylalanine_and_Tyrosine_Branches_from_Chorismate	Prephenate dehydratase (EC 4.2.1.51)	fig|6666666.229940.peg.695
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.229940.peg.16
Phosphate_metabolism	Alkaline phosphatase (EC 3.1.3.1)	fig|6666666.229940.peg.1938
Phosphate_metabolism	Inorganic pyrophosphatase (EC 3.6.1.1)	fig|6666666.229940.peg.2620
Phosphate_metabolism	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)	fig|6666666.229940.peg.2720
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229940.peg.2575
Phosphate_metabolism	Phosphate starvation-inducible protein PhoH, predicted ATPase	fig|6666666.229940.peg.2575
Phosphate_metabolism	Phosphate-specific outer membrane porin OprP	fig|6666666.229940.peg.1740
Phosphate_metabolism	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.229940.peg.979
Phosphate_metabolism	Predicted ATPase related to phosphate starvation-inducible protein PhoH	fig|6666666.229940.peg.2092
Phosphate_metabolism	Pyrophosphate-energized proton pump (EC 3.6.1.1)	fig|6666666.229940.peg.2124
Phosphate_metabolism	Pyrophosphate-specific outer membrane porin OprO	fig|6666666.229940.peg.1740
Phosphate_metabolism	Sodium-dependent phosphate transporter	fig|6666666.229940.peg.1228
Phosphoglycerate_mutase_protein_family	2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)	fig|6666666.229940.peg.599
Phosphoglycerate_mutase_protein_family	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)	fig|6666666.229940.peg.2458
Phosphoglycerate_mutase_protein_family	Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP	fig|6666666.229940.peg.2072
Phosphorylcholine_incorporation_in_LPS	Lipopolysaccharide cholinephosphotransferase LicD1 (EC 2.7.8.-)	fig|6666666.229940.peg.1141
Plasmid_replication	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229940.peg.1707
Plasmid_replication	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229940.peg.1708
Poly-gamma-glutamate_biosynthesis	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229940.peg.479
Poly-gamma-glutamate_biosynthesis	Glutamate racemase (EC 5.1.1.3)	fig|6666666.229940.peg.1970
Polyadenylation_bacterial	Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)	fig|6666666.229940.peg.258
Polyadenylation_bacterial	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229940.peg.1951
Polyamine_Metabolism	Agmatine deiminase (EC 3.5.3.12)	fig|6666666.229940.peg.1034
Polyamine_Metabolism	Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-)	fig|6666666.229940.peg.2122
Polyamine_Metabolism	Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-)	fig|6666666.229940.peg.2337
Polyamine_Metabolism	N-carbamoylputrescine amidase (3.5.1.53)	fig|6666666.229940.peg.1033
Polyglycerolphosphate_lipoteichoic_acid_biosynthesis	Lipoteichoic acid synthase LtaS Type IVb	fig|6666666.229940.peg.981
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229940.peg.2242
Polyhydroxybutyrate_metabolism	Acetyl-CoA acetyltransferase (EC 2.3.1.9)	fig|6666666.229940.peg.2244
Polyphosphate	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.229940.peg.979
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229940.peg.295
Polyprenyl_Diphosphate_Biosynthesis	(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)	fig|6666666.229940.peg.2511
Polyprenyl_Diphosphate_Biosynthesis	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229940.peg.295
Polyprenyl_Diphosphate_Biosynthesis	Undecaprenyl diphosphate synthase (EC 2.5.1.31)	fig|6666666.229940.peg.1974
Potassium_homeostasis	FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)	fig|6666666.229940.peg.982
Potassium_homeostasis	Large-conductance mechanosensitive channel	fig|6666666.229940.peg.324
Potassium_homeostasis	Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)	fig|6666666.229940.peg.966
Potassium_homeostasis	POTASSIUM/PROTON ANTIPORTER ROSB	fig|6666666.229940.peg.156
Potassium_homeostasis	Potassium efflux system KefA protein	fig|6666666.229940.peg.2696
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229940.peg.1116
Potassium_homeostasis	Potassium uptake protein TrkH	fig|6666666.229940.peg.1116
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229940.peg.1115
Potassium_homeostasis	Trk system potassium uptake protein TrkA	fig|6666666.229940.peg.1115
Programmed_frameshift	Peptide chain release factor 2	fig|6666666.229940.peg.1181
Programmed_frameshift	programmed frameshift-containing	fig|6666666.229940.peg.1181
Proline_Synthesis	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)	fig|6666666.229940.peg.1203
Propanediol_utilization	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229940.peg.1249
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41)	fig|6666666.229940.peg.2521
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41)	fig|6666666.229940.peg.2518
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA epimerase (EC 5.1.99.1)	fig|6666666.229940.peg.2522
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.229940.peg.1350
Propionyl-CoA_to_Succinyl-CoA_Module	Methylmalonyl-CoA mutase (EC 5.4.99.2)	fig|6666666.229940.peg.1351
Protection_from_Reactive_Oxygen_Species	Superoxide dismutase [Fe] (EC 1.15.1.1)	fig|6666666.229940.peg.902
Protein_chaperones	Chaperone protein DnaJ	fig|6666666.229940.peg.2132
Protein_chaperones	Chaperone protein DnaK	fig|6666666.229940.peg.568
Protein_chaperones	Chaperone protein HtpG	fig|6666666.229940.peg.740
Protein_chaperones	ClpB protein	fig|6666666.229940.peg.94
Protein_chaperones	Heat shock protein GrpE	fig|6666666.229940.peg.2133
Protein_degradation	Aminopeptidase C (EC 3.4.22.40)	fig|6666666.229940.peg.2722
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229940.peg.741
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease ATP-binding subunit ClpX	fig|6666666.229940.peg.2643
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229940.peg.2642
Proteolysis_in_bacteria,_ATP-dependent	ATP-dependent protease La (EC 3.4.21.53) Type I	fig|6666666.229940.peg.1500
Proteolysis_in_bacteria,_ATP-dependent	ClpB protein	fig|6666666.229940.peg.94
Proteolysis_in_bacteria,_ATP-dependent	DNA repair protein RadA	fig|6666666.229940.peg.1607
Proteorhodopsin	Octaprenyl diphosphate synthase (EC 2.5.1.90)	fig|6666666.229940.peg.295
Proton-dependent_Peptide_Transporters	Di-/tripeptide transporter	fig|6666666.229940.peg.1393
Purine_Utilization	Xanthine/uracil/thiamine/ascorbate permease family protein	fig|6666666.229940.peg.1373
Purine_conversions	2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)	fig|6666666.229940.peg.150
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229940.peg.214
Purine_conversions	5'-nucleotidase (EC 3.1.3.5)	fig|6666666.229940.peg.893
Purine_conversions	AMP nucleosidase (EC 3.2.2.4)	fig|6666666.229940.peg.2531
Purine_conversions	Adenylate kinase (EC 2.7.4.3)	fig|6666666.229940.peg.124
Purine_conversions	Adenylosuccinate lyase (EC 4.3.2.2)	fig|6666666.229940.peg.346
Purine_conversions	Adenylosuccinate synthetase (EC 6.3.4.4)	fig|6666666.229940.peg.2057
Purine_conversions	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.229940.peg.2297
Purine_conversions	Guanylate kinase (EC 2.7.4.8)	fig|6666666.229940.peg.1193
Purine_conversions	Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)	fig|6666666.229940.peg.123
Purine_conversions	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229940.peg.1002
Purine_conversions	Polyphosphate kinase (EC 2.7.4.1)	fig|6666666.229940.peg.979
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229940.peg.2045
Purine_conversions	Purine nucleoside phosphorylase (EC 2.4.2.1)	fig|6666666.229940.peg.2180
Purine_salvage_cluster	Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	fig|6666666.229940.peg.1041
Purine_salvage_cluster	Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	fig|6666666.229940.peg.1042
Purine_salvage_cluster	Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)	fig|6666666.229940.peg.1002
Putative_TldE-TldD_proteolytic_complex	TldD protein, part of TldE/TldD proteolytic complex	fig|6666666.229940.peg.391
Putative_TldE-TldD_proteolytic_complex	TldE protein, part of TldE/TldD proteolytic complex	fig|6666666.229940.peg.390
Putative_sugar_ABC_transporter_(ytf_cluster)	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)	fig|6666666.229940.peg.1761
Pyridoxin_(Vitamin_B6)_Biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229940.peg.1114
Pyridoxin_(Vitamin_B6)_Biosynthesis	4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262)	fig|6666666.229940.peg.1930
Pyridoxin_(Vitamin_B6)_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229940.peg.1843
Pyridoxin_(Vitamin_B6)_Biosynthesis	Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290)	fig|6666666.229940.peg.387
Pyridoxin_(Vitamin_B6)_Biosynthesis	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229940.peg.2152
Pyridoxin_(Vitamin_B6)_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229940.peg.1845
Pyridoxin_(Vitamin_B6)_Biosynthesis	Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)	fig|6666666.229940.peg.1537
Pyrimidine_utilization	Uracil permease	fig|6666666.229940.peg.298
Pyruvate:ferredoxin_oxidoreductase	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)	fig|6666666.229940.peg.1544
Pyruvate_Alanine_Serine_Interconversions	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229940.peg.1547
Pyruvate_Alanine_Serine_Interconversions	L-serine dehydratase (EC 4.3.1.17)	fig|6666666.229940.peg.743
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)	fig|6666666.229940.peg.1319
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)	fig|6666666.229940.peg.2494
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate kinase (EC 2.7.1.40)	fig|6666666.229940.peg.1958
Pyruvate_metabolism_I:_anaplerotic_reactions,_PEP	Pyruvate,phosphate dikinase (EC 2.7.9.1)	fig|6666666.229940.peg.2597
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetate kinase (EC 2.7.2.1)	fig|6666666.229940.peg.1248
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative	fig|6666666.229940.peg.1066
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229940.peg.1580
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229940.peg.2464
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229940.peg.2473
Pyruvate_metabolism_II:_acetyl-CoA,_acetogenesis_from_pyruvate	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229940.peg.1249
Queuosine-Archaeosine_Biosynthesis	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229940.peg.57
Queuosine-Archaeosine_Biosynthesis	Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)	fig|6666666.229940.peg.862
Queuosine-Archaeosine_Biosynthesis	Putative preQ0 transporter	fig|6666666.229940.peg.2095
Queuosine-Archaeosine_Biosynthesis	Queuosine Biosynthesis QueC ATPase	fig|6666666.229940.peg.2094
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229940.peg.443
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229940.peg.765
Queuosine-Archaeosine_Biosynthesis	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229940.peg.1222
Queuosine-Archaeosine_Biosynthesis	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229940.peg.2704
Quinate_degradation	3-dehydroquinate dehydratase II (EC 4.2.1.10)	fig|6666666.229940.peg.1957
RNA_methylation	16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)	fig|6666666.229940.peg.826
RNA_methylation	23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)	fig|6666666.229940.peg.2305
RNA_methylation	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229940.peg.954
RNA_methylation	LSU m5C1962 methyltransferase RlmI	fig|6666666.229940.peg.1614
RNA_methylation	Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)	fig|6666666.229940.peg.1932
RNA_methylation	Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	fig|6666666.229940.peg.1566
RNA_methylation	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229940.peg.2020
RNA_methylation	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229940.peg.1453
RNA_methylation	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229940.peg.858
RNA_methylation	tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223)	fig|6666666.229940.peg.1335
RNA_methylation	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229940.peg.2626
RNA_methylation	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229940.peg.1783
RNA_methylation	tRNA-specific 2-thiouridylase MnmA	fig|6666666.229940.peg.614
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParA	fig|6666666.229940.peg.1707
RNA_modification_and_chromosome_partitioning_cluster	Chromosome (plasmid) partitioning protein ParB	fig|6666666.229940.peg.1708
RNA_modification_and_chromosome_partitioning_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229940.peg.1127
RNA_modification_and_chromosome_partitioning_cluster	rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	fig|6666666.229940.peg.1453
RNA_modification_and_chromosome_partitioning_cluster	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229940.peg.1799
RNA_modification_cluster	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229940.peg.1127
RNA_modification_cluster	Inner membrane protein translocase component YidC, long form	fig|6666666.229940.peg.1355
RNA_modification_cluster	LSU ribosomal protein L34p	fig|6666666.229940.peg.511
RNA_modification_cluster	Protein YidD	fig|6666666.229940.peg.1167
RNA_modification_cluster	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229940.peg.1168
RNA_polymerase_bacterial	DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)	fig|6666666.229940.peg.2379
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)	fig|6666666.229940.peg.920
RNA_polymerase_bacterial	DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)	fig|6666666.229940.peg.921
RNA_processing_and_degradation,_bacterial	3'-to-5' exoribonuclease RNase R	fig|6666666.229940.peg.597
RNA_processing_and_degradation,_bacterial	Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)	fig|6666666.229940.peg.2534
RNA_processing_and_degradation,_bacterial	FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type	fig|6666666.229940.peg.1513
RNA_processing_and_degradation,_bacterial	Ribonuclease III (EC 3.1.26.3)	fig|6666666.229940.peg.217
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229940.peg.347
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229940.peg.331
RNA_pseudouridine_syntheses	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229940.peg.509
RNA_pseudouridine_syntheses	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229940.peg.105
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229940.peg.1664
RNA_pseudouridine_syntheses	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229940.peg.764
Rad50-Mre11_DNA_repair_cluster	DNA double-strand break repair Rad50 ATPase	fig|6666666.229940.peg.518
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcC	fig|6666666.229940.peg.1068
Rad50-Mre11_DNA_repair_cluster	Exonuclease SbcD	fig|6666666.229940.peg.1067
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229940.peg.260
Recycling_of_Peptidoglycan_Amino_Acids	Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)	fig|6666666.229940.peg.2311
Recycling_of_Peptidoglycan_Amino_Acids	AmpG permease	fig|6666666.229940.peg.1678
Recycling_of_Peptidoglycan_Amino_Acids	L-alanine-DL-glutamate epimerase	fig|6666666.229940.peg.283
Recycling_of_Peptidoglycan_Amino_Acids	N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	fig|6666666.229940.peg.1638
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)	fig|6666666.229940.peg.2152
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229940.peg.1580
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229940.peg.2464
Redox-dependent_regulation_of_nucleus_processes	NAD-dependent protein deacetylase of SIR2 family	fig|6666666.229940.peg.2473
Redox-dependent_regulation_of_nucleus_processes	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	fig|6666666.229940.peg.149
Resistance_to_fluoroquinolones	DNA gyrase subunit A (EC 5.99.1.3)	fig|6666666.229940.peg.1456
Resistance_to_fluoroquinolones	DNA gyrase subunit B (EC 5.99.1.3)	fig|6666666.229940.peg.706
Resistance_to_fluoroquinolones	Topoisomerase IV subunit A (EC 5.99.1.-)	fig|6666666.229940.peg.1704
Resistance_to_fluoroquinolones	Topoisomerase IV subunit B (EC 5.99.1.-)	fig|6666666.229940.peg.226
Respiratory_dehydrogenases_1	NADH dehydrogenase (EC 1.6.99.3)	fig|6666666.229940.peg.755
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229940.peg.933
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229940.peg.2212
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229940.peg.2486
Restriction-Modification_System	Putative DNA-binding protein in cluster with Type I restriction-modification system	fig|6666666.229940.peg.2487
Restriction-Modification_System	Putative predicted metal-dependent hydrolase	fig|6666666.229940.peg.381
Restriction-Modification_System	Putative predicted metal-dependent hydrolase	fig|6666666.229940.peg.969
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229940.peg.379
Restriction-Modification_System	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229940.peg.932
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229940.peg.380
Restriction-Modification_System	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229940.peg.936
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229940.peg.377
Restriction-Modification_System	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229940.peg.934
Rhamnose_containing_glycans	Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase (EC 2.4.1.-)	fig|6666666.229940.peg.953
Rhamnose_containing_glycans	Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase (EC 2.4.1.-)	fig|6666666.229940.peg.1139
Rhamnose_containing_glycans	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229940.peg.2192
Rhamnose_containing_glycans	Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)	fig|6666666.229940.peg.1929
Rhamnose_containing_glycans	UDP-glucose 4-epimerase (EC 5.1.3.2)	fig|6666666.229940.peg.2174
Rhamnose_containing_glycans	capsular polysaccharide biosynthesis protein	fig|6666666.229940.peg.800
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229940.peg.147
Rhamnose_containing_glycans	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.229940.peg.560
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229940.peg.146
Rhamnose_containing_glycans	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229940.peg.2726
Rhamnose_containing_glycans	putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide	fig|6666666.229940.peg.1675
Rhamnose_containing_glycans	putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide	fig|6666666.229940.peg.1676
Riboflavin,_FMN_and_FAD_metabolism	5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase	fig|6666666.229940.peg.834
Riboflavin,_FMN_and_FAD_metabolism	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229940.peg.1977
Riboflavin,_FMN_and_FAD_metabolism	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229940.peg.1185
Riboflavin,_FMN_and_FAD_metabolism	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229940.peg.1977
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229940.peg.648
Riboflavin,_FMN_and_FAD_metabolism	FMN adenylyltransferase, type 3 archaeal (EC 2.7.7.2)	fig|6666666.229940.peg.2191
Riboflavin,_FMN_and_FAD_metabolism	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229940.peg.680
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229940.peg.648
Riboflavin,_FMN_and_FAD_metabolism	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229940.peg.1805
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase	fig|6666666.229940.peg.834
Riboflavin,_FMN_and_FAD_metabolism_in_plants	5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	fig|6666666.229940.peg.1977
Riboflavin,_FMN_and_FAD_metabolism_in_plants	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	fig|6666666.229940.peg.1185
Riboflavin,_FMN_and_FAD_metabolism_in_plants	C-terminal domain of CinA type S	fig|6666666.229940.peg.2427
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)	fig|6666666.229940.peg.1977
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FIG000859: hypothetical protein YebC	fig|6666666.229940.peg.860
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229940.peg.648
Riboflavin,_FMN_and_FAD_metabolism_in_plants	FMN adenylyltransferase, type 3 archaeal (EC 2.7.7.2)	fig|6666666.229940.peg.2191
Riboflavin,_FMN_and_FAD_metabolism_in_plants	GTP cyclohydrolase II (EC 3.5.4.25)	fig|6666666.229940.peg.680
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Molybdopterin binding motif, CinA N-terminal domain	fig|6666666.229940.peg.2427
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229940.peg.192
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229940.peg.531
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229940.peg.1436
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229940.peg.1806
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	fig|6666666.229940.peg.2326
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229940.peg.648
Riboflavin,_FMN_and_FAD_metabolism_in_plants	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229940.peg.1805
Riboflavin,_FMN_and_FAD_metabolism_in_plants	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229940.peg.764
Ribonuclease_H	Ribonuclease HI-related protein 3	fig|6666666.229940.peg.1078
Ribonuclease_H	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229940.peg.702
Ribonucleases_in_Bacillus	Ribonuclease HII (EC 3.1.26.4)	fig|6666666.229940.peg.702
Ribonucleotide_reduction	Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)	fig|6666666.229940.peg.2116
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)	fig|6666666.229940.peg.268
Ribonucleotide_reduction	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)	fig|6666666.229940.peg.267
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)	fig|6666666.229940.peg.1918
Ribonucleotide_reduction	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)	fig|6666666.229940.peg.1919
Ribosomal_protein_S12p_Asp_methylthiotransferase	Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase	fig|6666666.229940.peg.1471
Ribosomal_protein_S12p_Asp_methylthiotransferase	SSU ribosomal protein S12p (S23e)	fig|6666666.229940.peg.2411
Ribosomal_protein_S5p_acylation	SSU ribosomal protein S5p (S2e)	fig|6666666.229940.peg.2389
Ribosome_LSU_bacterial	LSU ribosomal protein L10p (P0)	fig|6666666.229940.peg.918
Ribosome_LSU_bacterial	LSU ribosomal protein L11p (L12e)	fig|6666666.229940.peg.916
Ribosome_LSU_bacterial	LSU ribosomal protein L13p (L13Ae)	fig|6666666.229940.peg.176
Ribosome_LSU_bacterial	LSU ribosomal protein L14p (L23e)	fig|6666666.229940.peg.2396
Ribosome_LSU_bacterial	LSU ribosomal protein L15p (L27Ae)	fig|6666666.229940.peg.2387
Ribosome_LSU_bacterial	LSU ribosomal protein L16p (L10e)	fig|6666666.229940.peg.2399
Ribosome_LSU_bacterial	LSU ribosomal protein L17p	fig|6666666.229940.peg.2378
Ribosome_LSU_bacterial	LSU ribosomal protein L18p (L5e)	fig|6666666.229940.peg.2390
Ribosome_LSU_bacterial	LSU ribosomal protein L19p	fig|6666666.229940.peg.1643
Ribosome_LSU_bacterial	LSU ribosomal protein L1p (L10Ae)	fig|6666666.229940.peg.917
Ribosome_LSU_bacterial	LSU ribosomal protein L20p	fig|6666666.229940.peg.2306
Ribosome_LSU_bacterial	LSU ribosomal protein L21p	fig|6666666.229940.peg.866
Ribosome_LSU_bacterial	LSU ribosomal protein L22p (L17e)	fig|6666666.229940.peg.2401
Ribosome_LSU_bacterial	LSU ribosomal protein L23p (L23Ae)	fig|6666666.229940.peg.2405
Ribosome_LSU_bacterial	LSU ribosomal protein L24p (L26e)	fig|6666666.229940.peg.2395
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.229940.peg.1507
Ribosome_LSU_bacterial	LSU ribosomal protein L25p	fig|6666666.229940.peg.2102
Ribosome_LSU_bacterial	LSU ribosomal protein L27p	fig|6666666.229940.peg.867
Ribosome_LSU_bacterial	LSU ribosomal protein L28p	fig|6666666.229940.peg.2177
Ribosome_LSU_bacterial	LSU ribosomal protein L29p (L35e)	fig|6666666.229940.peg.2398
Ribosome_LSU_bacterial	LSU ribosomal protein L2p (L8e)	fig|6666666.229940.peg.2404
Ribosome_LSU_bacterial	LSU ribosomal protein L30p (L7e)	fig|6666666.229940.peg.2388
Ribosome_LSU_bacterial	LSU ribosomal protein L31p	fig|6666666.229940.peg.1605
Ribosome_LSU_bacterial	LSU ribosomal protein L32p	fig|6666666.229940.peg.1087
Ribosome_LSU_bacterial	LSU ribosomal protein L33p	fig|6666666.229940.peg.2176
Ribosome_LSU_bacterial	LSU ribosomal protein L33p, zinc-independent	fig|6666666.229940.peg.2176
Ribosome_LSU_bacterial	LSU ribosomal protein L34p	fig|6666666.229940.peg.511
Ribosome_LSU_bacterial	LSU ribosomal protein L35p	fig|6666666.229940.peg.2307
Ribosome_LSU_bacterial	LSU ribosomal protein L36p	fig|6666666.229940.peg.2383
Ribosome_LSU_bacterial	LSU ribosomal protein L3p (L3e)	fig|6666666.229940.peg.2407
Ribosome_LSU_bacterial	LSU ribosomal protein L4p (L1e)	fig|6666666.229940.peg.2406
Ribosome_LSU_bacterial	LSU ribosomal protein L5p (L11e)	fig|6666666.229940.peg.2394
Ribosome_LSU_bacterial	LSU ribosomal protein L6p (L9e)	fig|6666666.229940.peg.2391
Ribosome_LSU_bacterial	LSU ribosomal protein L7/L12 (P1/P2)	fig|6666666.229940.peg.919
Ribosome_LSU_bacterial	LSU ribosomal protein L9p	fig|6666666.229940.peg.1637
Ribosome_SSU_bacterial	SSU ribosomal protein S10p (S20e)	fig|6666666.229940.peg.2408
Ribosome_SSU_bacterial	SSU ribosomal protein S11p (S14e)	fig|6666666.229940.peg.2381
Ribosome_SSU_bacterial	SSU ribosomal protein S12p (S23e)	fig|6666666.229940.peg.2411
Ribosome_SSU_bacterial	SSU ribosomal protein S13p (S18e)	fig|6666666.229940.peg.2382
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.229940.peg.1790
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e)	fig|6666666.229940.peg.2393
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.229940.peg.1790
Ribosome_SSU_bacterial	SSU ribosomal protein S14p (S29e), zinc-independent	fig|6666666.229940.peg.2393
Ribosome_SSU_bacterial	SSU ribosomal protein S15p (S13e)	fig|6666666.229940.peg.783
Ribosome_SSU_bacterial	SSU ribosomal protein S16p	fig|6666666.229940.peg.731
Ribosome_SSU_bacterial	SSU ribosomal protein S17p (S11e)	fig|6666666.229940.peg.2397
Ribosome_SSU_bacterial	SSU ribosomal protein S18p	fig|6666666.229940.peg.1636
Ribosome_SSU_bacterial	SSU ribosomal protein S19p (S15e)	fig|6666666.229940.peg.2403
Ribosome_SSU_bacterial	SSU ribosomal protein S1p	fig|6666666.229940.peg.778
Ribosome_SSU_bacterial	SSU ribosomal protein S20p	fig|6666666.229940.peg.717
Ribosome_SSU_bacterial	SSU ribosomal protein S21p	fig|6666666.229940.peg.910
Ribosome_SSU_bacterial	SSU ribosomal protein S2p (SAe)	fig|6666666.229940.peg.174
Ribosome_SSU_bacterial	SSU ribosomal protein S3p (S3e)	fig|6666666.229940.peg.2400
Ribosome_SSU_bacterial	SSU ribosomal protein S4p (S9e)	fig|6666666.229940.peg.2380
Ribosome_SSU_bacterial	SSU ribosomal protein S5p (S2e)	fig|6666666.229940.peg.2389
Ribosome_SSU_bacterial	SSU ribosomal protein S6p	fig|6666666.229940.peg.1635
Ribosome_SSU_bacterial	SSU ribosomal protein S7p (S5e)	fig|6666666.229940.peg.2410
Ribosome_SSU_bacterial	SSU ribosomal protein S8p (S15Ae)	fig|6666666.229940.peg.2392
Ribosome_SSU_bacterial	SSU ribosomal protein S9p (S16e)	fig|6666666.229940.peg.175
Ribosome_activity_modulation	Ribosome hibernation protein YhbH	fig|6666666.229940.peg.912
Ribosome_biogenesis_bacterial	16S rRNA processing protein RimM	fig|6666666.229940.peg.990
Ribosome_biogenesis_bacterial	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229940.peg.954
Ribosome_biogenesis_bacterial	LSU m5C1962 methyltransferase RlmI	fig|6666666.229940.peg.1614
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229940.peg.331
Ribosome_biogenesis_bacterial	Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)	fig|6666666.229940.peg.509
Ribosome_biogenesis_bacterial	Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	fig|6666666.229940.peg.2157
Ribosome_biogenesis_bacterial	Ribosomal-protein-L7p-serine acetyltransferase	fig|6666666.229940.peg.2139
Ribosome_biogenesis_bacterial	SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	fig|6666666.229940.peg.2020
Ribosome_biogenesis_bacterial	Similar to tRNA pseudouridine synthase C, group TruC1	fig|6666666.229940.peg.105
Ribosome_biogenesis_bacterial	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229940.peg.93
Ribosome_biogenesis_bacterial	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229940.peg.858
Ribosome_recycling_related_cluster	ATP-dependent Clp protease ATP-binding subunit ClpA	fig|6666666.229940.peg.741
Ribosome_recycling_related_cluster	Ribosome recycling factor	fig|6666666.229940.peg.1242
Ribosome_recycling_related_cluster	SSU ribosomal protein S2p (SAe)	fig|6666666.229940.peg.174
Ribosome_recycling_related_cluster	Translation elongation factor Ts	fig|6666666.229940.peg.173
Ribosome_recycling_related_cluster	Uridine monophosphate kinase (EC 2.7.4.22)	fig|6666666.229940.peg.2523
Rubrerythrin	Rubredoxin	fig|6666666.229940.peg.2699
RuvABC_plus_a_hypothetical	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)	fig|6666666.229940.peg.1202
RuvABC_plus_a_hypothetical	FIG000859: hypothetical protein YebC	fig|6666666.229940.peg.860
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvA	fig|6666666.229940.peg.877
RuvABC_plus_a_hypothetical	Holliday junction DNA helicase RuvB	fig|6666666.229940.peg.2239
Salicylate_and_gentisate_catabolism	Fumarylacetoacetate hydrolase family protein	fig|6666666.229940.peg.505
Septum_site-determining_cluster_Min	Septum site-determining protein MinD	fig|6666666.229940.peg.2627
Serine_Biosynthesis	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	fig|6666666.229940.peg.1843
Serine_Biosynthesis	Phosphoserine aminotransferase (EC 2.6.1.52)	fig|6666666.229940.peg.1845
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229940.peg.2470
Serine_Biosynthesis	Phosphoserine phosphatase (EC 3.1.3.3)	fig|6666666.229940.peg.2470
Serine_Biosynthesis	Serine hydroxymethyltransferase (EC 2.1.2.1)	fig|6666666.229940.peg.901
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.229940.peg.14
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.229940.peg.86
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.229940.peg.90
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.229940.peg.483
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.229940.peg.512
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.229940.peg.1239
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.229940.peg.1291
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.229940.peg.1296
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.229940.peg.1789
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.229940.peg.1795
Serine_endopeptidase_(EC_3.4.21.-)	Lysyl endopeptidase (EC 3.4.21.50)	fig|6666666.229940.peg.2076
Serine_endopeptidase_(EC_3.4.21.-)	Prolyl endopeptidase (EC 3.4.21.26)	fig|6666666.229940.peg.1439
Sex_pheromones_in_Enterococcus_faecalis_and_other_Firmicutes	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229940.peg.2559
Signal_peptidase	Lipoprotein signal peptidase (EC 3.4.23.36)	fig|6666666.229940.peg.2559
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229940.peg.467
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229940.peg.468
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229940.peg.1519
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229940.peg.2225
Signal_peptidase	Signal peptidase I (EC 3.4.21.89)	fig|6666666.229940.peg.2231
Spore_Core_Dehydration	Fused spore maturation proteins A and B	fig|6666666.229940.peg.2497
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229940.peg.1508
Sporulation-associated_proteins_with_broader_functions	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229940.peg.2103
Staphylococcal_pathogenicity_islands_SaPI	GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)	fig|6666666.229940.peg.2297
Staphylococcal_pathogenicity_islands_SaPI	Heat shock protein 60 family chaperone GroEL	fig|6666666.229940.peg.1981
Staphylococcal_pathogenicity_islands_SaPI	SSU ribosomal protein S18p	fig|6666666.229940.peg.1636
Staphylococcal_pathogenicity_islands_SaPI	tmRNA-binding protein SmpB	fig|6666666.229940.peg.2616
Staphylococcal_phi-Mu50B-like_prophages	Iron-sulfur cluster assembly protein SufB	fig|6666666.229940.peg.687
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)	fig|6666666.229940.peg.843
Stationary_phase_repair_cluster	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229940.peg.1043
Stationary_phase_repair_cluster	5-nucleotidase SurE (EC 3.1.3.5)	fig|6666666.229940.peg.824
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229940.peg.1238
Stationary_phase_repair_cluster	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	fig|6666666.229940.peg.1496
Stationary_phase_repair_cluster	Cell division protein FtsL	fig|6666666.229940.peg.2270
Stringent_Response,_(p)ppGpp_metabolism	GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I	fig|6666666.229940.peg.1950
Stringent_Response,_(p)ppGpp_metabolism	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)	fig|6666666.229940.peg.1711
Succinate_dehydrogenase	Succinate dehydrogenase cytochrome b subunit	fig|6666666.229940.peg.655
Succinate_dehydrogenase	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	fig|6666666.229940.peg.656
Succinate_dehydrogenase	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	fig|6666666.229940.peg.657
Sucrose_utilization	Fructokinase (EC 2.7.1.4)	fig|6666666.229940.peg.262
Teichoic_and_lipoteichoic_acids_biosynthesis	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)	fig|6666666.229940.peg.1043
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.229940.peg.788
Terminal_cytochrome_d_ubiquinol_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229940.peg.787
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)	fig|6666666.229940.peg.788
Terminal_cytochrome_oxidases	Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)	fig|6666666.229940.peg.787
Tetracycline_resistance,_ribosome_protection_type	Translation elongation factor G	fig|6666666.229940.peg.2409
Tetracycline_resistance,_ribosome_protection_type,_too	Translation elongation factor G	fig|6666666.229940.peg.2409
Thiamin_biosynthesis	1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7)	fig|6666666.229940.peg.1114
Thiamin_biosynthesis	Predicted thiamin transporter PnuT	fig|6666666.229940.peg.65
Thiamin_biosynthesis	Thiamin pyrophosphokinase (EC 2.7.6.2)	fig|6666666.229940.peg.651
Thiamin_biosynthesis	Thiamin-regulated outer membrane receptor Omr1	fig|6666666.229940.peg.66
Thiamin_biosynthesis	Thiamine-monophosphate kinase (EC 2.7.4.16)	fig|6666666.229940.peg.1432
Thioredoxin-disulfide_reductase	Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)	fig|6666666.229940.peg.1312
Thioredoxin-disulfide_reductase	Hydrogen peroxide-inducible genes activator	fig|6666666.229940.peg.2698
Thioredoxin-disulfide_reductase	Thiol peroxidase, Bcp-type (EC 1.11.1.15)	fig|6666666.229940.peg.2336
Thioredoxin-disulfide_reductase	Thioredoxin reductase (EC 1.8.1.9)	fig|6666666.229940.peg.1303
Threonine_anaerobic_catabolism_gene_cluster	Acetate kinase (EC 2.7.2.1)	fig|6666666.229940.peg.1248
Threonine_anaerobic_catabolism_gene_cluster	Phosphate acetyltransferase (EC 2.3.1.8)	fig|6666666.229940.peg.1249
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229940.peg.679
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229940.peg.694
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229940.peg.2355
Threonine_and_Homoserine_Biosynthesis	Aspartate aminotransferase (EC 2.6.1.1)	fig|6666666.229940.peg.2358
Threonine_and_Homoserine_Biosynthesis	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)	fig|6666666.229940.peg.1217
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.229940.peg.1478
Threonine_and_Homoserine_Biosynthesis	Aspartokinase (EC 2.7.2.4)	fig|6666666.229940.peg.1569
Threonine_and_Homoserine_Biosynthesis	Homoserine dehydrogenase (EC 1.1.1.3)	fig|6666666.229940.peg.1569
Threonine_and_Homoserine_Biosynthesis	Predicted functional analog of homoserine kinase (EC 2.7.1.-)	fig|6666666.229940.peg.1570
Threonine_degradation	L-threonine 3-dehydrogenase (EC 1.1.1.103)	fig|6666666.229940.peg.2547
Tolerance_to_colicin_E2	Inner membrane protein CreD-like protein	fig|6666666.229940.peg.113
Ton_and_Tol_transport_systems	4-hydroxybenzoyl-CoA thioesterase family active site	fig|6666666.229940.peg.1756
Ton_and_Tol_transport_systems	Biopolymer transport protein ExbD/TolR	fig|6666666.229940.peg.1534
Ton_and_Tol_transport_systems	Colicin I receptor precursor	fig|6666666.229940.peg.1915
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229940.peg.1533
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229940.peg.2217
Ton_and_Tol_transport_systems	Ferric siderophore transport system, periplasmic binding protein TonB	fig|6666666.229940.peg.2510
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.229940.peg.1536
Ton_and_Tol_transport_systems	MotA/TolQ/ExbB proton channel family protein	fig|6666666.229940.peg.2513
Ton_and_Tol_transport_systems	Outer membrane lipoprotein omp16 precursor	fig|6666666.229940.peg.442
Ton_and_Tol_transport_systems	TolA protein	fig|6666666.229940.peg.1905
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.34
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.51
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.71
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.343
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.485
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.617
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.792
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.929
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.1059
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.1407
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.1483
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.1527
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.1802
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.1886
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.1894
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.1916
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.1962
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.2028
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.2182
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.2280
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.2328
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.2526
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.2544
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.2592
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.2631
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.2691
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.2746
Ton_and_Tol_transport_systems	TonB-dependent receptor	fig|6666666.229940.peg.2758
Ton_and_Tol_transport_systems	tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins	fig|6666666.229940.peg.33
Ton_and_Tol_transport_systems	tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins	fig|6666666.229940.peg.68
Transcription_factors_bacterial	FIG000325: clustered with transcription termination protein NusA	fig|6666666.229940.peg.683
Transcription_factors_bacterial	Transcription accessory protein (S1 RNA-binding domain)	fig|6666666.229940.peg.994
Transcription_factors_bacterial	Transcription antitermination protein NusG	fig|6666666.229940.peg.915
Transcription_factors_bacterial	Transcription elongation factor GreA	fig|6666666.229940.peg.265
Transcription_factors_bacterial	Transcription termination factor Rho	fig|6666666.229940.peg.1310
Transcription_factors_bacterial	Transcription termination protein NusA	fig|6666666.229940.peg.684
Transcription_factors_bacterial	Transcription termination protein NusB	fig|6666666.229940.peg.1855
Transcription_factors_bacterial	Transcription-repair coupling factor	fig|6666666.229940.peg.2143
Transcription_factors_bacterial	Transcriptional activator RfaH	fig|6666666.229940.peg.1300
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor RpoD	fig|6666666.229940.peg.2290
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma factor SigW	fig|6666666.229940.peg.2440
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.229940.peg.1195
Transcription_initiation,_bacterial_sigma_factors	RNA polymerase sigma-54 factor RpoN	fig|6666666.229940.peg.2129
Translation_elongation_factor_G_family	Translation elongation factor G	fig|6666666.229940.peg.2409
Translation_elongation_factor_G_family	Translation elongation factor G-related protein	fig|6666666.229940.peg.2371
Translation_elongation_factor_P_lysylation	Translation elongation factor P	fig|6666666.229940.peg.1986
Translation_elongation_factors_bacterial	Translation elongation factor G	fig|6666666.229940.peg.2409
Translation_elongation_factors_bacterial	Translation elongation factor G-related protein	fig|6666666.229940.peg.2371
Translation_elongation_factors_bacterial	Translation elongation factor LepA	fig|6666666.229940.peg.2591
Translation_elongation_factors_bacterial	Translation elongation factor P	fig|6666666.229940.peg.1986
Translation_elongation_factors_bacterial	Translation elongation factor Ts	fig|6666666.229940.peg.173
Translation_elongation_factors_bacterial	Translation elongation factor Tu	fig|6666666.229940.peg.913
Translation_initiation_factors_bacterial	Methionyl-tRNA formyltransferase (EC 2.1.2.9)	fig|6666666.229940.peg.738
Translation_initiation_factors_bacterial	Ribosome-binding factor A	fig|6666666.229940.peg.1965
Translation_initiation_factors_bacterial	Translation initiation factor 1	fig|6666666.229940.peg.2384
Translation_initiation_factors_bacterial	Translation initiation factor 2	fig|6666666.229940.peg.685
Translation_initiation_factors_bacterial	Translation initiation factor 3	fig|6666666.229940.peg.2308
Translation_initiation_factors_bacterial	Translation initiation factor SUI1-related protein	fig|6666666.229940.peg.878
Translation_termination_factors_bacterial	Methionine aminopeptidase (EC 3.4.11.18)	fig|6666666.229940.peg.2385
Translation_termination_factors_bacterial	Peptide chain release factor 1	fig|6666666.229940.peg.2036
Translation_termination_factors_bacterial	Peptide chain release factor 2	fig|6666666.229940.peg.1181
Translation_termination_factors_bacterial	Peptide chain release factor 3	fig|6666666.229940.peg.559
Translation_termination_factors_bacterial	Peptide deformylase (EC 3.5.1.88)	fig|6666666.229940.peg.1942
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229940.peg.1508
Translation_termination_factors_bacterial	Peptidyl-tRNA hydrolase (EC 3.1.1.29)	fig|6666666.229940.peg.2103
Translation_termination_factors_bacterial	Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2	fig|6666666.229940.peg.1978
Translation_termination_factors_bacterial	Ribosome recycling factor	fig|6666666.229940.peg.1242
Translation_termination_factors_bacterial	tmRNA-binding protein SmpB	fig|6666666.229940.peg.2616
Transport_system_clustering_with_HemG	FIG000605: protein co-occurring with transport systems (COG1739)	fig|6666666.229940.peg.20
Transport_system_clustering_with_HemG	Potassium uptake protein TrkH	fig|6666666.229940.peg.1116
Trehalose_Biosynthesis	1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)	fig|6666666.229940.peg.1773
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.229940.peg.611
Trehalose_Biosynthesis	Alpha-amylase (EC 3.2.1.1)	fig|6666666.229940.peg.1866
Trehalose_Uptake_and_Utilization	Beta-phosphoglucomutase (EC 5.4.2.6)	fig|6666666.229940.peg.2320
Triacylglycerol_metabolism	Lysophospholipase (EC 3.1.1.5)	fig|6666666.229940.peg.1661
Triacylglycerol_metabolism	Phospholipase A1 precursor (EC 3.1.1.32, EC 3.1.1.4)	fig|6666666.229940.peg.92
Twin-arginine_translocation_system	Twin-arginine translocation protein TatA	fig|6666666.229940.peg.1618
Twin-arginine_translocation_system	Twin-arginine translocation protein TatC	fig|6666666.229940.peg.1619
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.229940.peg.312
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.229940.peg.322
Two-component_regulatory_systems_in_Campylobacter	Two-component system response regulator	fig|6666666.229940.peg.1006
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229940.peg.379
Type_I_Restriction-Modification	Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72)	fig|6666666.229940.peg.932
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229940.peg.380
Type_I_Restriction-Modification	Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)	fig|6666666.229940.peg.936
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229940.peg.377
Type_I_Restriction-Modification	Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)	fig|6666666.229940.peg.934
Type_VI_secretion_systems	ClpB protein	fig|6666666.229940.peg.94
UDP-N-acetylmuramate_from_Fructose-6-phosphate_Biosynthesis	Phosphoglucosamine mutase (EC 5.4.2.10)	fig|6666666.229940.peg.865
USS-DB-7	ClpB protein	fig|6666666.229940.peg.94
Universal_GTPases	GTP-binding and nucleic acid-binding protein YchF	fig|6666666.229940.peg.1999
Universal_GTPases	GTP-binding protein EngA	fig|6666666.229940.peg.1084
Universal_GTPases	GTP-binding protein EngB	fig|6666666.229940.peg.1105
Universal_GTPases	GTP-binding protein Era	fig|6666666.229940.peg.1085
Universal_GTPases	GTP-binding protein HflX	fig|6666666.229940.peg.883
Universal_GTPases	GTP-binding protein Obg	fig|6666666.229940.peg.125
Universal_GTPases	GTP-binding protein TypA/BipA	fig|6666666.229940.peg.782
Universal_GTPases	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229940.peg.1127
Universal_GTPases	Ribosome small subunit-stimulated GTPase EngC	fig|6666666.229940.peg.1243
Universal_GTPases	Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1)	fig|6666666.229940.peg.1472
Universal_GTPases	Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)	fig|6666666.229940.peg.2352
Universal_GTPases	Translation elongation factor G	fig|6666666.229940.peg.2409
Universal_GTPases	Translation elongation factor LepA	fig|6666666.229940.peg.2591
Universal_GTPases	Translation elongation factor Tu	fig|6666666.229940.peg.913
Universal_GTPases	Translation initiation factor 2	fig|6666666.229940.peg.685
Unknown_carbohydrate_utilization_(_cluster_Ydj_)	Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)	fig|6666666.229940.peg.1761
Unspecified_monosaccharide_transport_cluster	Cell division protein FtsK	fig|6666666.229940.peg.1305
Uracil-DNA_glycosylase	Domain often clustered or fused with uracil-DNA glycosylase	fig|6666666.229940.peg.1763
Uracil-DNA_glycosylase	G:T/U mismatch-specific uracil/thymine DNA-glycosylase	fig|6666666.229940.peg.1345
Uracil-DNA_glycosylase	Uracil-DNA glycosylase, family 1	fig|6666666.229940.peg.140
Utilization_of_glutathione_as_a_sulphur_source	Gamma-glutamyltranspeptidase (EC 2.3.2.2)	fig|6666666.229940.peg.479
V-Type_ATP_synthase	V-type ATP synthase subunit A (EC 3.6.3.14)	fig|6666666.229940.peg.1150
V-Type_ATP_synthase	V-type ATP synthase subunit B (EC 3.6.3.14)	fig|6666666.229940.peg.1149
V-Type_ATP_synthase	V-type ATP synthase subunit C (EC 3.6.3.14)	fig|6666666.229940.peg.1151
V-Type_ATP_synthase	V-type ATP synthase subunit D (EC 3.6.3.14)	fig|6666666.229940.peg.1148
V-Type_ATP_synthase	V-type ATP synthase subunit E (EC 3.6.3.14)	fig|6666666.229940.peg.1152
V-Type_ATP_synthase	V-type ATP synthase subunit I (EC 3.6.3.14)	fig|6666666.229940.peg.1147
V-Type_ATP_synthase	V-type ATP synthase subunit K (EC 3.6.3.14)	fig|6666666.229940.peg.1146
Valine_degradation	Branched-chain amino acid aminotransferase (EC 2.6.1.42)	fig|6666666.229940.peg.1547
Xylose_utilization	D-xylose proton-symporter XylE	fig|6666666.229940.peg.270
Xylose_utilization	D-xylose proton-symporter XylE	fig|6666666.229940.peg.1404
Xylose_utilization	Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8)	fig|6666666.229940.peg.2007
Xylose_utilization	Xylanase	fig|6666666.229940.peg.2533
Xylose_utilization	Xylose isomerase (EC 5.3.1.5)	fig|6666666.229940.peg.1403
Xylose_utilization	Xylulose kinase (EC 2.7.1.17)	fig|6666666.229940.peg.1402
YcfH	Putative deoxyribonuclease YcfH	fig|6666666.229940.peg.2512
YcfH	Putative deoxyribonuclease YjjV	fig|6666666.229940.peg.1166
YgjD_and_YeaZ	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229940.peg.93
YgjD_and_YeaZ	TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229940.peg.2428
YjeE	NAD(P)HX dehydratase	fig|6666666.229940.peg.154
YjeE	NAD(P)HX epimerase	fig|6666666.229940.peg.154
YjeE	TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	fig|6666666.229940.peg.93
YjeE	TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA	fig|6666666.229940.peg.2480
cAMP_signaling_in_bacteria	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)	fig|6666666.229940.peg.2642
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229940.peg.899
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229940.peg.1440
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229940.peg.2766
cAMP_signaling_in_bacteria	Adenylate cyclase (EC 4.6.1.1)	fig|6666666.229940.peg.2767
cell_division_cluster_containing_FtsQ	Cell division protein FtsA	fig|6666666.229940.peg.2261
cell_division_cluster_containing_FtsQ	Cell division protein FtsQ	fig|6666666.229940.peg.2262
cell_division_cluster_containing_FtsQ	Cell division protein FtsW	fig|6666666.229940.peg.2265
cell_division_cluster_containing_FtsQ	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229940.peg.2260
cell_division_cluster_containing_FtsQ	D-alanine--D-alanine ligase (EC 6.3.2.4)	fig|6666666.229940.peg.508
cell_division_cluster_containing_FtsQ	UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8)	fig|6666666.229940.peg.2263
cell_division_core_of_larger_cluster	Cell division protein FtsA	fig|6666666.229940.peg.2261
cell_division_core_of_larger_cluster	Cell division protein FtsQ	fig|6666666.229940.peg.2262
cell_division_core_of_larger_cluster	Cell division protein FtsZ (EC 3.4.24.-)	fig|6666666.229940.peg.2260
cell_division_core_of_larger_cluster	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)	fig|6666666.229940.peg.2264
dTDP-rhamnose_synthesis	Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	fig|6666666.229940.peg.2192
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)	fig|6666666.229940.peg.147
dTDP-rhamnose_synthesis	dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133)	fig|6666666.229940.peg.560
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229940.peg.146
dTDP-rhamnose_synthesis	dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)	fig|6666666.229940.peg.2726
mnm5U34_biosynthesis_bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229940.peg.699
mnm5U34_biosynthesis_bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229940.peg.1127
mnm5U34_biosynthesis_bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229940.peg.1799
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229940.peg.535
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229940.peg.1585
n-Phenylalkanoic_acid_degradation	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	fig|6666666.229940.peg.2505
pVir_Plasmid_of_Campylobacter	DNA topoisomerase I (EC 5.99.1.2)	fig|6666666.229940.peg.659
pVir_Plasmid_of_Campylobacter	Single-stranded DNA-binding protein	fig|6666666.229940.peg.2537
riboflavin_to_FAD	FMN adenylyltransferase (EC 2.7.7.2)	fig|6666666.229940.peg.648
riboflavin_to_FAD	Riboflavin kinase (EC 2.7.1.26)	fig|6666666.229940.peg.648
riboflavin_to_FAD	Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)	fig|6666666.229940.peg.1805
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229940.peg.1341
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229940.peg.1342
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229940.peg.1718
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase (EC 6.1.1.7)	fig|6666666.229940.peg.2763
tRNA_aminoacylation,_Ala	Alanyl-tRNA synthetase domain protein	fig|6666666.229940.peg.1808
tRNA_aminoacylation,_Arg	Arginyl-tRNA synthetase (EC 6.1.1.19)	fig|6666666.229940.peg.658
tRNA_aminoacylation,_Asp_and_Asn	Asparaginyl-tRNA synthetase (EC 6.1.1.22)	fig|6666666.229940.peg.348
tRNA_aminoacylation,_Asp_and_Asn	Aspartyl-tRNA synthetase (EC 6.1.1.12)	fig|6666666.229940.peg.1306
tRNA_aminoacylation,_Cys	Cysteinyl-tRNA synthetase (EC 6.1.1.16)	fig|6666666.229940.peg.447
tRNA_aminoacylation,_Glu_and_Gln	Glutaminyl-tRNA synthetase (EC 6.1.1.18)	fig|6666666.229940.peg.1431
tRNA_aminoacylation,_Glu_and_Gln	Glutamyl-tRNA synthetase (EC 6.1.1.17)	fig|6666666.229940.peg.906
tRNA_aminoacylation,_Gly	Glycyl-tRNA synthetase (EC 6.1.1.14)	fig|6666666.229940.peg.419
tRNA_aminoacylation,_His	Histidyl-tRNA synthetase (EC 6.1.1.21)	fig|6666666.229940.peg.2055
tRNA_aminoacylation,_Ile	Isoleucyl-tRNA synthetase (EC 6.1.1.5)	fig|6666666.229940.peg.2561
tRNA_aminoacylation,_Leu	Leucyl-tRNA synthetase (EC 6.1.1.4)	fig|6666666.229940.peg.2500
tRNA_aminoacylation,_Lys	Lysyl-tRNA synthetase (class II) (EC 6.1.1.6)	fig|6666666.229940.peg.1631
tRNA_aminoacylation,_Met	Methionyl-tRNA synthetase (EC 6.1.1.10)	fig|6666666.229940.peg.2482
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)	fig|6666666.229940.peg.744
tRNA_aminoacylation,_Phe	Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)	fig|6666666.229940.peg.859
tRNA_aminoacylation,_Pro	Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type	fig|6666666.229940.peg.1814
tRNA_aminoacylation,_Ser	Seryl-tRNA synthetase (EC 6.1.1.11)	fig|6666666.229940.peg.869
tRNA_aminoacylation,_Thr	Threonyl-tRNA synthetase (EC 6.1.1.3)	fig|6666666.229940.peg.2309
tRNA_aminoacylation,_Trp	Tryptophanyl-tRNA synthetase (EC 6.1.1.2)	fig|6666666.229940.peg.1109
tRNA_aminoacylation,_Tyr	Tyrosyl-tRNA synthetase (EC 6.1.1.1)	fig|6666666.229940.peg.1083
tRNA_aminoacylation,_Val	Valyl-tRNA synthetase (EC 6.1.1.9)	fig|6666666.229940.peg.661
tRNA_modification_Bacteria	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	fig|6666666.229940.peg.699
tRNA_modification_Bacteria	Cytidine deaminase (EC 3.5.4.5)	fig|6666666.229940.peg.2414
tRNA_modification_Bacteria	FIG004453: protein YceG like	fig|6666666.229940.peg.12
tRNA_modification_Bacteria	FIG137478: Hypothetical protein	fig|6666666.229940.peg.1308
tRNA_modification_Bacteria	GTP cyclohydrolase I (EC 3.5.4.16) type 1	fig|6666666.229940.peg.57
tRNA_modification_Bacteria	GTPase and tRNA-U34 5-formylation enzyme TrmE	fig|6666666.229940.peg.1127
tRNA_modification_Bacteria	Iron-sulfur cluster assembly ATPase protein SufC	fig|6666666.229940.peg.688
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufB	fig|6666666.229940.peg.687
tRNA_modification_Bacteria	Iron-sulfur cluster assembly protein SufD	fig|6666666.229940.peg.689
tRNA_modification_Bacteria	LSU m3Psi1915 methyltransferase RlmH	fig|6666666.229940.peg.954
tRNA_modification_Bacteria	Queuosine Biosynthesis QueC ATPase	fig|6666666.229940.peg.2094
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229940.peg.443
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229940.peg.765
tRNA_modification_Bacteria	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)	fig|6666666.229940.peg.1222
tRNA_modification_Bacteria	tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31)	fig|6666666.229940.peg.858
tRNA_modification_Bacteria	tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33)	fig|6666666.229940.peg.2626
tRNA_modification_Bacteria	tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)	fig|6666666.229940.peg.1783
tRNA_modification_Bacteria	tRNA dihydrouridine synthase B (EC 1.-.-.-)	fig|6666666.229940.peg.1214
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229940.peg.2043
tRNA_modification_Bacteria	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229940.peg.2148
tRNA_modification_Bacteria	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229940.peg.1664
tRNA_modification_Bacteria	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229940.peg.764
tRNA_modification_Bacteria	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	fig|6666666.229940.peg.1799
tRNA_modification_Bacteria	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229940.peg.1309
tRNA_modification_Bacteria	tRNA-guanine transglycosylase (EC 2.4.2.29)	fig|6666666.229940.peg.2704
tRNA_modification_Bacteria	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229940.peg.394
tRNA_modification_Bacteria	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229940.peg.855
tRNA_nucleotidyltransferase	tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25)	fig|6666666.229940.peg.1951
tRNA_processing	Ribonuclease P protein component (EC 3.1.26.5)	fig|6666666.229940.peg.1168
tRNA_processing	Ribonuclease Z (EC 3.1.26.11)	fig|6666666.229940.peg.2367
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229940.peg.2043
tRNA_processing	tRNA dimethylallyltransferase (EC 2.5.1.75)	fig|6666666.229940.peg.2148
tRNA_processing	tRNA pseudouridine synthase A (EC 4.2.1.70)	fig|6666666.229940.peg.1664
tRNA_processing	tRNA pseudouridine synthase B (EC 4.2.1.70)	fig|6666666.229940.peg.764
tRNA_processing	tRNA(Ile)-lysidine synthetase (EC 6.3.4.19)	fig|6666666.229940.peg.1309
tRNA_processing	tRNA-i(6)A37 methylthiotransferase	fig|6666666.229940.peg.394
tRNA_processing	tRNA-specific adenosine-34 deaminase (EC 3.5.4.-)	fig|6666666.229940.peg.855
tRNAs	tRNA-Ala-GGC	fig|6666666.229940.rna.29
tRNAs	tRNA-Arg-ACG	fig|6666666.229940.rna.23
tRNAs	tRNA-Arg-CCG	fig|6666666.229940.rna.3
tRNAs	tRNA-Cys-GCA	fig|6666666.229940.rna.4
tRNAs	tRNA-Gly-CCC	fig|6666666.229940.rna.33
tRNAs	tRNA-Gly-GCC	fig|6666666.229940.rna.39
tRNAs	tRNA-Gly-GCC	fig|6666666.229940.rna.43
tRNAs	tRNA-Leu-CAA	fig|6666666.229940.rna.21
tRNAs	tRNA-Leu-CAG	fig|6666666.229940.rna.42
tRNAs	tRNA-Leu-GAG	fig|6666666.229940.rna.41
tRNAs	tRNA-Phe-GAA	fig|6666666.229940.rna.6
tRNAs	tRNA-Pro-CGG	fig|6666666.229940.rna.45
tRNAs	tRNA-Pro-GGG	fig|6666666.229940.rna.50
tRNAs	tRNA-Ser-CGA	fig|6666666.229940.rna.46
tRNAs	tRNA-Ser-GGA	fig|6666666.229940.rna.47
tRNAs	tRNA-Trp-CCA	fig|6666666.229940.rna.20
