fig|6666666.148656.peg.1 CDS NC_015571.1 1 1422 1 + 1422 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.148656.peg.2 CDS NC_015571.1 1435 2007 1 + 573 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.148656.peg.3 CDS NC_015571.1 2971 2009 -1 - 963 membrane protein, putative - none -
fig|6666666.148656.peg.4 CDS NC_015571.1 3108 3815 3 + 708 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.148656.peg.5 CDS NC_015571.1 5043 3889 -3 - 1155 FIG00935710: hypothetical protein - none -
fig|6666666.148656.peg.6 CDS NC_015571.1 6475 5096 -1 - 1380 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.148656.peg.7 CDS NC_015571.1 7402 9981 1 + 2580 ATP-dependent Clp protease ATP-binding subunit ClpA Proteolysis in bacteria, ATP-dependent;
Ribosome recycling related cluster
fig|6666666.148656.peg.8 CDS NC_015571.1 10121 13132 2 + 3012 Beta-N-acetylglucosaminidase - none -
fig|6666666.148656.peg.9 CDS NC_015571.1 13180 14208 1 + 1029 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.10 CDS NC_015571.1 14218 14988 1 + 771 FIG00936262: hypothetical protein - none -
fig|6666666.148656.peg.11 CDS NC_015571.1 15577 15425 -1 - 153 hypothetical protein - none -
fig|6666666.148656.peg.12 CDS NC_015571.1 15533 16882 2 + 1350 Two-component system response regulator - none -
fig|6666666.148656.peg.13 CDS NC_015571.1 16893 18230 3 + 1338 putative two-component system sensor histidine kinase - none -
fig|6666666.148656.peg.14 CDS NC_015571.1 18300 20480 3 + 2181 FIG00935570: hypothetical protein - none -
fig|6666666.148656.peg.15 CDS NC_015571.1 20565 21260 3 + 696 transcriptional regulator, MarR family - none -
fig|6666666.148656.peg.16 CDS NC_015571.1 22256 21255 -2 - 1002 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.148656.peg.17 CDS NC_015571.1 23929 22253 -1 - 1677 Sulfate permease - none -
fig|6666666.148656.peg.18 CDS NC_015571.1 25034 25570 2 + 537 Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) Oxidative stress
fig|6666666.148656.peg.19 CDS NC_015571.1 25639 26298 1 + 660 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.148656.peg.20 CDS NC_015571.1 26311 29787 1 + 3477 FIG00936082: hypothetical protein - none -
fig|6666666.148656.peg.21 CDS NC_015571.1 29863 31038 1 + 1176 FIG00897671: hypothetical protein - none -
fig|6666666.148656.peg.22 CDS NC_015571.1 31045 31533 1 + 489 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.148656.peg.23 CDS NC_015571.1 32178 31636 -3 - 543 TRNA/rRNA methyltransferase - none -
fig|6666666.148656.peg.24 CDS NC_015571.1 32942 33418 2 + 477 Cytidine deaminase (EC 3.5.4.5) pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.148656.peg.25 CDS NC_015571.1 34845 34048 -3 - 798 FIG00935720: hypothetical protein - none -
fig|6666666.148656.peg.26 CDS NC_015571.1 37439 34893 -2 - 2547 Beta-mannosidase (EC 3.2.1.25) Mannose Metabolism
fig|6666666.148656.peg.27 CDS NC_015571.1 38806 37508 -1 - 1299 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.148656.peg.28 CDS NC_015571.1 39841 39527 -1 - 315 Thioredoxin CBSS-315749.4.peg.3658
fig|6666666.148656.peg.29 CDS NC_015571.1 43576 39890 -1 - 3687 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.148656.peg.30 CDS NC_015571.1 43855 44220 1 + 366 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.148656.peg.31 CDS NC_015571.1 44975 45094 2 + 120 hypothetical protein - none -
fig|6666666.148656.peg.32 CDS NC_015571.1 45452 46732 2 + 1281 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine Biosynthesis
fig|6666666.148656.peg.33 CDS NC_015571.1 46889 49222 2 + 2334 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.148656.peg.34 CDS NC_015571.1 49886 51940 2 + 2055 Chaperone protein HtpG Protein chaperones
fig|6666666.148656.peg.35 CDS NC_015571.1 52977 52123 -3 - 855 Phosphatidate cytidylyltransferase (EC 2.7.7.41) - none -
fig|6666666.148656.peg.36 CDS NC_015571.1 55027 53006 -1 - 2022 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.148656.peg.37 CDS NC_015571.1 56328 55231 -3 - 1098 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.148656.peg.38 CDS NC_015571.1 57828 56815 -3 - 1014 Peptidase, M23/M37 family - none -
fig|6666666.148656.peg.39 CDS NC_015571.1 58222 58962 1 + 741 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.148656.peg.40 CDS NC_015571.1 58980 60320 3 + 1341 Aspartokinase (EC 2.7.2.4) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.148656.peg.41 CDS NC_015571.1 60304 61497 1 + 1194 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.148656.peg.42 CDS NC_015571.1 61532 62374 2 + 843 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.148656.peg.43 CDS NC_015571.1 62466 62846 3 + 381 Transcriptional regulator, MecI family - none -
fig|6666666.148656.peg.44 CDS NC_015571.1 62881 64197 1 + 1317 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.148656.peg.45 CDS NC_015571.1 65204 64302 -2 - 903 Mobile element protein - none -
fig|6666666.148656.peg.46 CDS NC_015571.1 66594 65509 -3 - 1086 Mobile element protein - none -
fig|6666666.148656.peg.47 CDS NC_015571.1 73464 66991 -3 - 6474 hemagglutinin, putative - none -
fig|6666666.148656.peg.48 CDS NC_015571.1 75176 73854 -2 - 1323 Nucleoside permease NupG - none -
fig|6666666.148656.peg.49 CDS NC_015571.1 76526 75192 -2 - 1335 hypothetical protein - none -
fig|6666666.148656.peg.50 CDS NC_015571.1 77479 76664 -1 - 816 Similar to glycogen synthase (EC 2.4.1.21) - none -
fig|6666666.148656.peg.51 CDS NC_015571.1 77447 77698 2 + 252 FIG00936086: hypothetical protein - none -
fig|6666666.148656.peg.52 CDS NC_015571.1 77818 77961 1 + 144 hypothetical protein - none -
fig|6666666.148656.peg.53 CDS NC_015571.1 78107 80230 2 + 2124 ATP-dependent DNA helicase, RecQ family - none -
fig|6666666.148656.peg.54 CDS NC_015571.1 80696 80553 -2 - 144 hypothetical protein - none -
fig|6666666.148656.peg.55 CDS NC_015571.1 80718 82391 3 + 1674 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.148656.peg.56 CDS NC_015571.1 82562 82774 2 + 213 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148656.peg.57 CDS NC_015571.1 83494 82991 -1 - 504 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.148656.peg.58 CDS NC_015571.1 83631 84050 3 + 420 FIG00936527: hypothetical protein - none -
fig|6666666.148656.peg.59 CDS NC_015571.1 84266 85543 2 + 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis
fig|6666666.148656.peg.60 CDS NC_015571.1 86289 85675 -3 - 615 FIG00936526: hypothetical protein - none -
fig|6666666.148656.peg.61 CDS NC_015571.1 87522 87785 3 + 264 Cytochrome c nitrite reductase, small subunit NrfH Nitrate and nitrite ammonification
fig|6666666.148656.peg.62 CDS NC_015571.1 87807 89303 3 + 1497 Cytochrome c552 precursor (EC 1.7.2.2) Nitrate and nitrite ammonification;
Soluble cytochromes and functionally related electron carriers
fig|6666666.148656.peg.63 CDS NC_015571.1 89374 90669 1 + 1296 FIG00935607: hypothetical protein - none -
fig|6666666.148656.peg.64 CDS NC_015571.1 90662 91477 2 + 816 Cytochrome c biogenesis protein CcsA - none -
fig|6666666.148656.peg.65 CDS NC_015571.1 91746 92267 3 + 522 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.148656.peg.66 CDS NC_015571.1 92264 93028 2 + 765 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis
fig|6666666.148656.peg.67 CDS NC_015571.1 93070 95091 1 + 2022 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.148656.peg.68 CDS NC_015571.1 95323 95550 1 + 228 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) - none -
fig|6666666.148656.peg.69 CDS NC_015571.1 95569 96651 1 + 1083 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) - none -
fig|6666666.148656.peg.70 CDS NC_015571.1 96672 96851 3 + 180 FIG00936116: hypothetical protein - none -
fig|6666666.148656.peg.71 CDS NC_015571.1 96868 97632 1 + 765 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) - none -
fig|6666666.148656.peg.72 CDS NC_015571.1 97661 98206 2 + 546 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) - none -
fig|6666666.148656.peg.73 CDS NC_015571.1 98435 98286 -2 - 150 FIG00935756: hypothetical protein - none -
fig|6666666.148656.peg.74 CDS NC_015571.1 98457 100745 3 + 2289 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.148656.peg.75 CDS NC_015571.1 101585 101109 -2 - 477 V-type ATP synthase subunit K (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148656.peg.76 CDS NC_015571.1 103454 101640 -2 - 1815 V-type ATP synthase subunit I (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148656.peg.77 CDS NC_015571.1 104005 103451 -1 - 555 V-type ATP synthase subunit D (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148656.peg.78 CDS NC_015571.1 105400 104081 -1 - 1320 V-type ATP synthase subunit B (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148656.peg.79 CDS NC_015571.1 107166 105412 -3 - 1755 V-type ATP synthase subunit A (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148656.peg.80 CDS NC_015571.1 108114 107176 -3 - 939 V-type ATP synthase subunit C (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148656.peg.81 CDS NC_015571.1 108708 108118 -3 - 591 V-type ATP synthase subunit E (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148656.peg.82 CDS NC_015571.1 108888 108748 -3 - 141 hypothetical protein - none -
fig|6666666.148656.peg.83 CDS NC_015571.1 109437 110654 3 + 1218 immunoreactive 46 kDa antigen PG99 - none -
fig|6666666.148656.peg.84 CDS NC_015571.1 113619 110734 -3 - 2886 FIG00936088: hypothetical protein - none -
fig|6666666.148656.peg.85 CDS NC_015571.1 114277 115179 1 + 903 Mobile element protein - none -
fig|6666666.148656.peg.86 CDS NC_015571.1 115331 115176 -2 - 156 hypothetical protein - none -
fig|6666666.148656.peg.87 CDS NC_015571.1 118254 115474 -3 - 2781 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.148656.peg.88 CDS NC_015571.1 120311 118305 -2 - 2007 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism
fig|6666666.148656.peg.89 CDS NC_015571.1 122611 120308 -1 - 2304 sodium/hydrogen antiporter - none -
fig|6666666.148656.peg.90 CDS NC_015571.1 123074 123289 2 + 216 FIG00936536: hypothetical protein - none -
fig|6666666.148656.peg.91 CDS NC_015571.1 123361 124770 1 + 1410 FIG00936114: hypothetical protein - none -
fig|6666666.148656.peg.92 CDS NC_015571.1 124787 126823 2 + 2037 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.148656.peg.93 CDS NC_015571.1 128145 126943 -3 - 1203 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.148656.peg.94 CDS NC_015571.1 128853 128978 3 + 126 hypothetical protein - none -
fig|6666666.148656.peg.95 CDS NC_015571.1 129120 129257 3 + 138 hypothetical protein - none -
fig|6666666.148656.peg.96 CDS NC_015571.1 129640 129260 -1 - 381 Endoribonuclease L-PSP - none -
fig|6666666.148656.peg.97 CDS NC_015571.1 130415 129666 -2 - 750 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.148656.peg.98 CDS NC_015571.1 132067 130412 -1 - 1656 DNA repair protein RecN DNA repair, bacterial
fig|6666666.148656.peg.99 CDS NC_015571.1 132918 132082 -3 - 837 FIG00935642: hypothetical protein - none -
fig|6666666.148656.peg.100 CDS NC_015571.1 134201 132987 -2 - 1215 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.148656.peg.101 CDS NC_015571.1 135006 134227 -3 - 780 DNA Pol III Epsilon Chain - none -
fig|6666666.148656.peg.102 CDS NC_015571.1 136152 135019 -3 - 1134 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.148656.peg.103 CDS NC_015571.1 136452 137354 3 + 903 Mobile element protein - none -
fig|6666666.148656.peg.104 CDS NC_015571.1 137481 137618 3 + 138 hypothetical protein - none -
fig|6666666.148656.peg.105 CDS NC_015571.1 138099 137590 -3 - 510 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.148656.peg.106 CDS NC_015571.1 139741 138107 -1 - 1635 carboxy-terminal processing protease precursor - none -
fig|6666666.148656.peg.107 CDS NC_015571.1 140198 139749 -2 - 450 dCMP deaminase (EC 3.5.4.12) - none -
fig|6666666.148656.peg.108 CDS NC_015571.1 140638 140285 -1 - 354 hypothetical protein - none -
fig|6666666.148656.peg.109 CDS NC_015571.1 141300 140803 -3 - 498 Flavodoxin 1 Flavodoxin
fig|6666666.148656.peg.110 CDS NC_015571.1 142599 141439 -3 - 1161 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycine and Serine Utilization
fig|6666666.148656.peg.111 CDS NC_015571.1 144023 142839 -2 - 1185 FIG00935464: hypothetical protein - none -
fig|6666666.148656.peg.112 CDS NC_015571.1 144322 144152 -1 - 171 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycine and Serine Utilization
fig|6666666.148656.peg.113 CDS NC_015571.1 144781 144335 -1 - 447 hypothetical protein - none -
fig|6666666.148656.peg.114 CDS NC_015571.1 148928 144774 -2 - 4155 Leucine-rich repeat containing protein - none -
fig|6666666.148656.peg.115 CDS NC_015571.1 149194 149421 1 + 228 hypothetical protein - none -
fig|6666666.148656.peg.116 CDS NC_015571.1 150340 149819 -1 - 522 membrane protein, putative - none -
fig|6666666.148656.peg.117 CDS NC_015571.1 150544 150377 -1 - 168 FIG00936346: hypothetical protein - none -
fig|6666666.148656.peg.118 CDS NC_015571.1 151255 150590 -1 - 666 methlytransferase, UbiE/COQ5 family - none -
fig|6666666.148656.peg.119 CDS NC_015571.1 151413 151291 -3 - 123 hypothetical protein - none -
fig|6666666.148656.peg.120 CDS NC_015571.1 153633 151654 -3 - 1980 Urocanate hydratase (EC 4.2.1.49) Histidine Degradation
fig|6666666.148656.peg.121 CDS NC_015571.1 154381 153974 -1 - 408 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.148656.peg.122 CDS NC_015571.1 155342 154368 -2 - 975 hemolysin - none -
fig|6666666.148656.peg.123 CDS NC_015571.1 156181 155354 -1 - 828 Hemolysin A - none -
fig|6666666.148656.peg.124 CDS NC_015571.1 157598 156210 -2 - 1389 Na+/H+ antiporter NhaA type NhaA, NhaD and Sodium-dependent phosphate transporters
fig|6666666.148656.peg.125 CDS NC_015571.1 157699 159171 1 + 1473 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.148656.peg.126 CDS NC_015571.1 159222 160241 3 + 1020 FIG00936465: hypothetical protein - none -
fig|6666666.148656.peg.127 CDS NC_015571.1 160252 161268 1 + 1017 Glycosyltransferase - none -
fig|6666666.148656.peg.128 CDS NC_015571.1 161301 162743 3 + 1443 FIG00936489: hypothetical protein - none -
fig|6666666.148656.peg.129 CDS NC_015571.1 162920 162798 -2 - 123 hypothetical protein - none -
fig|6666666.148656.peg.130 CDS NC_015571.1 165072 162976 -3 - 2097 Alpha-L-fucosidase (EC 3.2.1.51) - none -
fig|6666666.148656.peg.131 CDS NC_015571.1 167154 165073 -3 - 2082 Polyphosphate kinase (EC 2.7.4.1) Phosphate metabolism;
Polyphosphate;
Purine conversions
fig|6666666.148656.peg.132 CDS NC_015571.1 168538 167318 -1 - 1221 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.148656.peg.133 CDS NC_015571.1 168617 169651 2 + 1035 Selenophosphate-dependent tRNA 2-selenouridine synthase Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.148656.peg.134 CDS NC_015571.1 169648 170262 1 + 615 Hypothetical protein Cj1505c - none -
fig|6666666.148656.peg.135 CDS NC_015571.1 170403 171065 3 + 663 FIG00936641: hypothetical protein - none -
fig|6666666.148656.peg.136 CDS NC_015571.1 171504 171328 -3 - 177 hypothetical protein - none -
fig|6666666.148656.peg.137 CDS NC_015571.1 171654 172091 3 + 438 lipoprotein, putative - none -
fig|6666666.148656.peg.138 CDS NC_015571.1 172127 178450 2 + 6324 FIG00936030: hypothetical protein - none -
fig|6666666.148656.peg.139 CDS NC_015571.1 179499 179942 3 + 444 hypothetical protein - none -
fig|6666666.148656.peg.140 CDS NC_015571.1 179990 181390 2 + 1401 FIG00936030: hypothetical protein - none -
fig|6666666.148656.peg.141 CDS NC_015571.1 183193 183360 1 + 168 hypothetical protein - none -
fig|6666666.148656.peg.142 CDS NC_015571.1 183367 183762 1 + 396 FIG00936030: hypothetical protein - none -
fig|6666666.148656.peg.143 CDS NC_015571.1 184098 184487 3 + 390 hypothetical protein - none -
fig|6666666.148656.peg.144 CDS NC_015571.1 185168 185857 2 + 690 FIG00936372: hypothetical protein - none -
fig|6666666.148656.peg.145 CDS NC_015571.1 185940 186482 3 + 543 FIG00936030: hypothetical protein - none -
fig|6666666.148656.peg.146 CDS NC_015571.1 187201 188490 1 + 1290 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Degradation
fig|6666666.148656.peg.147 CDS NC_015571.1 189296 188619 -2 - 678 Thiamin pyrophosphokinase (EC 2.7.6.2) Thiamin biosynthesis
fig|6666666.148656.peg.148 CDS NC_015571.1 189898 189293 -1 - 606 Predicted thiamin transporter PnuT Thiamin biosynthesis
fig|6666666.148656.peg.149 CDS NC_015571.1 192290 189906 -2 - 2385 Thiamin-regulated outer membrane receptor Omr1 Thiamin biosynthesis
fig|6666666.148656.peg.150 CDS NC_015571.1 193313 192366 -2 - 948 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.148656.peg.151 CDS NC_015571.1 193958 193398 -2 - 561 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.148656.peg.152 CDS NC_015571.1 194714 193995 -2 - 720 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.148656.peg.153 CDS NC_015571.1 196788 194797 -3 - 1992 FIG00898950: hypothetical protein - none -
fig|6666666.148656.peg.154 CDS NC_015571.1 197304 197020 -3 - 285 hypothetical protein - none -
fig|6666666.148656.peg.155 CDS NC_015571.1 198380 197478 -2 - 903 Mobile element protein - none -
fig|6666666.148656.peg.156 CDS NC_015571.1 199068 199913 3 + 846 hypothetical protein - none -
fig|6666666.148656.peg.157 CDS NC_015571.1 201298 200213 -1 - 1086 Mobile element protein - none -
fig|6666666.148656.peg.158 CDS NC_015571.1 201989 201510 -2 - 480 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.148656.peg.159 CDS NC_015571.1 202987 201995 -1 - 993 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.148656.peg.160 CDS NC_015571.1 203605 203000 -1 - 606 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.148656.peg.161 CDS NC_015571.1 204151 203765 -1 - 387 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.148656.peg.162 CDS NC_015571.1 204543 204163 -3 - 381 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.148656.peg.163 CDS NC_015571.1 204692 204576 -2 - 117 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.148656.peg.164 CDS NC_015571.1 204927 204709 -3 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.148656.peg.165 CDS NC_015571.1 205679 204930 -2 - 750 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.148656.peg.166 CDS NC_015571.1 207055 205715 -1 - 1341 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.148656.peg.167 CDS NC_015571.1 207266 207060 -2 - 207 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.148656.peg.168 CDS NC_015571.1 208201 207728 -1 - 474 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.148656.peg.169 CDS NC_015571.1 208596 208252 -3 - 345 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.148656.peg.170 CDS NC_015571.1 209022 208615 -3 - 408 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.148656.peg.171 CDS NC_015571.1 209532 209185 -3 - 348 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.148656.peg.172 CDS NC_015571.1 209900 209631 -2 - 270 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.148656.peg.173 CDS NC_015571.1 210462 209902 -3 - 561 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.148656.peg.174 CDS NC_015571.1 210833 210462 -2 - 372 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.148656.peg.175 CDS NC_015571.1 211170 210805 -3 - 366 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.148656.peg.176 CDS NC_015571.1 211375 211172 -1 - 204 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.148656.peg.177 CDS NC_015571.1 211634 211440 -2 - 195 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.148656.peg.178 CDS NC_015571.1 212074 211640 -1 - 435 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.148656.peg.179 CDS NC_015571.1 212835 212095 -3 - 741 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.148656.peg.180 CDS NC_015571.1 213246 212842 -3 - 405 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.148656.peg.181 CDS NC_015571.1 213570 213301 -3 - 270 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.148656.peg.182 CDS NC_015571.1 214273 213593 -1 - 681 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.148656.peg.183 CDS NC_015571.1 214717 214424 -1 - 294 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.148656.peg.184 CDS NC_015571.1 215361 214732 -3 - 630 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.148656.peg.185 CDS NC_015571.1 215978 215361 -2 - 618 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.148656.peg.186 CDS NC_015571.1 216306 216001 -3 - 306 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.148656.peg.187 CDS NC_015571.1 218445 216322 -3 - 2124 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.148656.peg.188 CDS NC_015571.1 218847 218458 -3 - 390 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.148656.peg.189 CDS NC_015571.1 219431 219171 -2 - 261 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.148656.peg.190 CDS NC_015571.1 221456 220170 -2 - 1287 FIG00935796: hypothetical protein - none -
fig|6666666.148656.peg.191 CDS NC_015571.1 221658 221491 -3 - 168 FIG00935518: hypothetical protein - none -
fig|6666666.148656.peg.192 CDS NC_015571.1 221614 222921 1 + 1308 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.148656.peg.193 CDS NC_015571.1 222943 223386 1 + 444 FIG00935916: hypothetical protein - none -
fig|6666666.148656.peg.194 CDS NC_015571.1 223379 224185 2 + 807 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.148656.peg.195 CDS NC_015571.1 224172 227660 3 + 3489 FIG00936378: hypothetical protein - none -
fig|6666666.148656.peg.196 CDS NC_015571.1 227856 229106 3 + 1251 hypothetical protein - none -
fig|6666666.148656.peg.197 CDS NC_015571.1 229114 229272 1 + 159 hypothetical protein - none -
fig|6666666.148656.peg.198 CDS NC_015571.1 230383 229379 -1 - 1005 Malate dehydrogenase (EC 1.1.1.37) TCA Cycle
fig|6666666.148656.peg.199 CDS NC_015571.1 230554 230832 1 + 279 hypothetical protein - none -
fig|6666666.148656.peg.200 CDS NC_015571.1 230845 232005 1 + 1161 Transporter - none -
fig|6666666.148656.peg.201 CDS NC_015571.1 232387 234087 1 + 1701 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.148656.peg.202 CDS NC_015571.1 234172 234762 1 + 591 Alkaline phosphatase like protein Phosphate metabolism
fig|6666666.148656.peg.203 CDS NC_015571.1 234823 235758 1 + 936 putative transporter - none -
fig|6666666.148656.peg.204 CDS NC_015571.1 235762 236781 1 + 1020 NAD-dependent epimerase/dehydratase family protein - none -
fig|6666666.148656.peg.205 CDS NC_015571.1 237279 237106 -3 - 174 hypothetical protein - none -
fig|6666666.148656.peg.206 CDS NC_015571.1 238865 237570 -2 - 1296 4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-) - none -
fig|6666666.148656.peg.207 CDS NC_015571.1 239085 238972 -3 - 114 hypothetical protein - none -
fig|6666666.148656.peg.208 CDS NC_015571.1 239552 239403 -2 - 150 hypothetical protein - none -
fig|6666666.148656.peg.209 CDS NC_015571.1 239759 239571 -2 - 189 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.148656.peg.210 CDS NC_015571.1 240018 239779 -3 - 240 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.148656.peg.211 CDS NC_015571.1 242508 240241 -3 - 2268 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.148656.peg.212 CDS NC_015571.1 243328 242705 -1 - 624 FIG00936044: hypothetical protein - none -
fig|6666666.148656.peg.213 CDS NC_015571.1 243290 243523 2 + 234 hypothetical protein - none -
fig|6666666.148656.peg.214 CDS NC_015571.1 243516 243635 3 + 120 hypothetical protein - none -
fig|6666666.148656.peg.215 CDS NC_015571.1 243740 244315 2 + 576 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.148656.peg.216 CDS NC_015571.1 244312 245718 1 + 1407 bacterial sugar transferase - none -
fig|6666666.148656.peg.217 CDS NC_015571.1 245715 247511 3 + 1797 Chloride channel protein - none -
fig|6666666.148656.peg.218 CDS NC_015571.1 248536 247472 -1 - 1065 FIG00936361: hypothetical protein - none -
fig|6666666.148656.peg.219 CDS NC_015571.1 248573 249460 2 + 888 TPR-repeat-containing protein - none -
fig|6666666.148656.peg.220 CDS NC_015571.1 249575 249805 2 + 231 hypothetical protein - none -
fig|6666666.148656.peg.221 CDS NC_015571.1 250956 249967 -3 - 990 hypothetical protein - none -
fig|6666666.148656.peg.222 CDS NC_015571.1 251475 252527 3 + 1053 FIG00936307: hypothetical protein - none -
fig|6666666.148656.peg.223 CDS NC_015571.1 254409 253318 -3 - 1092 FIG00935885: hypothetical protein - none -
fig|6666666.148656.peg.224 CDS NC_015571.1 254622 255674 3 + 1053 FIG00936307: hypothetical protein - none -
fig|6666666.148656.peg.225 CDS NC_015571.1 258038 256035 -2 - 2004 FIG00936766: hypothetical protein - none -
fig|6666666.148656.peg.226 CDS NC_015571.1 258658 258068 -1 - 591 hypothetical protein - none -
fig|6666666.148656.peg.227 CDS NC_015571.1 258667 258813 1 + 147 hypothetical protein - none -
fig|6666666.148656.peg.228 CDS NC_015571.1 260644 260354 -1 - 291 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.148656.peg.229 CDS NC_015571.1 263759 260664 -2 - 3096 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.148656.peg.230 CDS NC_015571.1 264594 263821 -3 - 774 CRISPR-associated RAMP Cmr6 CRISP Cmr Cluster
fig|6666666.148656.peg.231 CDS NC_015571.1 265028 264591 -2 - 438 CRISPR-associated RAMP Cmr5 CRISP Cmr Cluster
fig|6666666.148656.peg.232 CDS NC_015571.1 265708 265025 -1 - 684 CRISPR-associated RAMP Cmr4 CRISP Cmr Cluster
fig|6666666.148656.peg.233 CDS NC_015571.1 266951 265740 -2 - 1212 CRISPR-associated RAMP Cmr3 CRISP Cmr Cluster
fig|6666666.148656.peg.234 CDS NC_015571.1 268602 266953 -3 - 1650 CRISPR-associated RAMP Cmr2 CRISP Cmr Cluster
fig|6666666.148656.peg.235 CDS NC_015571.1 270046 268595 -1 - 1452 FIG00936276: hypothetical protein - none -
fig|6666666.148656.peg.236 CDS NC_015571.1 270304 270053 -1 - 252 FIG00935910: hypothetical protein - none -
fig|6666666.148656.peg.237 CDS NC_015571.1 271889 270306 -2 - 1584 FIG00935632: hypothetical protein - none -
fig|6666666.148656.peg.238 CDS NC_015571.1 272631 274508 3 + 1878 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.148656.peg.239 CDS NC_015571.1 274542 276341 3 + 1800 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.148656.peg.240 CDS NC_015571.1 276348 276800 3 + 453 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.148656.peg.241 CDS NC_015571.1 276895 277155 1 + 261 FIG00936480: hypothetical protein - none -
fig|6666666.148656.peg.242 CDS NC_015571.1 277163 278011 2 + 849 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.148656.peg.243 CDS NC_015571.1 278052 278213 3 + 162 FIG00935764: hypothetical protein - none -
fig|6666666.148656.peg.244 CDS NC_015571.1 279296 278322 -2 - 975 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.148656.peg.245 CDS NC_015571.1 279992 279354 -2 - 639 FIG00935689: hypothetical protein - none -
fig|6666666.148656.peg.246 CDS NC_015571.1 280639 280013 -1 - 627 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.148656.peg.247 CDS NC_015571.1 282026 280629 -2 - 1398 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.148656.peg.248 CDS NC_015571.1 282758 282042 -2 - 717 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.148656.peg.249 CDS NC_015571.1 284162 282819 -2 - 1344 dNTP triphosphohydrolase, broad substrate specificity, subgroup 3 Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.148656.peg.250 CDS NC_015571.1 285298 284306 -1 - 993 Putative membrane protein YeiH - none -
fig|6666666.148656.peg.251 CDS NC_015571.1 285808 286167 1 + 360 FIG00936356: hypothetical protein - none -
fig|6666666.148656.peg.252 CDS NC_015571.1 286474 288975 1 + 2502 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.148656.peg.253 CDS NC_015571.1 289545 290282 3 + 738 DNA recombination and repair protein RecO DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.148656.peg.254 CDS NC_015571.1 290355 292103 3 + 1749 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.148656.peg.255 CDS NC_015571.1 292337 292209 -2 - 129 hypothetical protein - none -
fig|6666666.148656.peg.256 CDS NC_015571.1 293447 292362 -2 - 1086 Mobile element protein - none -
fig|6666666.148656.peg.257 CDS NC_015571.1 295942 294857 -1 - 1086 Mobile element protein - none -
fig|6666666.148656.peg.258 CDS NC_015571.1 300190 299315 -1 - 876 hypothetical protein - none -
fig|6666666.148656.peg.259 CDS NC_015571.1 300811 300641 -1 - 171 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.148656.peg.260 CDS NC_015571.1 301920 300904 -3 - 1017 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.148656.peg.261 CDS NC_015571.1 302429 301917 -2 - 513 CRISPR-associated RecB family exonuclease Cas4a CRISPRs
fig|6666666.148656.peg.262 CDS NC_015571.1 304752 302449 -3 - 2304 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.148656.peg.263 CDS NC_015571.1 305758 304742 -1 - 1017 hypothetical protein - none -
fig|6666666.148656.peg.264 CDS NC_015571.1 307268 305769 -2 - 1500 hypothetical protein - none -
fig|6666666.148656.peg.265 CDS NC_015571.1 307996 307265 -1 - 732 hypothetical protein - none -
fig|6666666.148656.peg.266 CDS NC_015571.1 308670 308005 -3 - 666 CRISPR-associated protein, TM1814 family - none -
fig|6666666.148656.peg.267 CDS NC_015571.1 311248 309317 -1 - 1932 putative sulfatase - none -
fig|6666666.148656.peg.268 CDS NC_015571.1 313795 311252 -1 - 2544 FIG00935645: hypothetical protein - none -
fig|6666666.148656.peg.269 CDS NC_015571.1 313951 313823 -1 - 129 hypothetical protein - none -
fig|6666666.148656.peg.270 CDS NC_015571.1 314931 313960 -3 - 972 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.148656.peg.271 CDS NC_015571.1 320576 315477 -2 - 5100 hemagglutinin, putative - none -
fig|6666666.148656.peg.272 CDS NC_015571.1 320949 320764 -3 - 186 hypothetical protein - none -
fig|6666666.148656.peg.273 CDS NC_015571.1 321017 321163 2 + 147 hypothetical protein - none -
fig|6666666.148656.peg.274 CDS NC_015571.1 321281 321901 2 + 621 Alpha-ribazole-5@1-phosphate phosphatase (EC 3.1.3.73) Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Phosphoglycerate mutase protein family
fig|6666666.148656.peg.275 CDS NC_015571.1 322104 322454 3 + 351 FIG00935520: hypothetical protein - none -
fig|6666666.148656.peg.276 CDS NC_015571.1 322451 322972 2 + 522 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.148656.peg.277 CDS NC_015571.1 323006 325558 2 + 2553 FIG00935826: hypothetical protein - none -
fig|6666666.148656.peg.278 CDS NC_015571.1 326128 326763 1 + 636 FIG00936499: hypothetical protein - none -
fig|6666666.148656.peg.279 CDS NC_015571.1 326831 327226 2 + 396 FIG00935940: hypothetical protein - none -
fig|6666666.148656.peg.280 CDS NC_015571.1 329766 327253 -3 - 2514 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.148656.peg.281 CDS NC_015571.1 331272 329800 -3 - 1473 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.148656.peg.282 CDS NC_015571.1 332098 331295 -1 - 804 Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.148656.peg.283 CDS NC_015571.1 332287 332964 1 + 678 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.148656.peg.284 CDS NC_015571.1 332996 333907 2 + 912 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family Potassium homeostasis
fig|6666666.148656.peg.285 CDS NC_015571.1 334179 333976 -3 - 204 hypothetical protein - none -
fig|6666666.148656.peg.286 CDS NC_015571.1 334643 334194 -2 - 450 N-acetylmuramoyl-L-alanine amidase - none -
fig|6666666.148656.peg.287 CDS NC_015571.1 335259 334783 -3 - 477 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.288 CDS NC_015571.1 335383 335499 1 + 117 hypothetical protein - none -
fig|6666666.148656.peg.289 CDS NC_015571.1 336351 335620 -3 - 732 FIG00935880: hypothetical protein - none -
fig|6666666.148656.peg.290 CDS NC_015571.1 337094 338188 2 + 1095 UPF0135 protein Bsu YqfO @ Bsu YqfO NIF3/CutA domain - none -
fig|6666666.148656.peg.291 CDS NC_015571.1 338206 338961 1 + 756 FIG137478: Hypothetical protein tRNA modification Bacteria
fig|6666666.148656.peg.292 CDS NC_015571.1 339068 339208 2 + 141 hypothetical protein - none -
fig|6666666.148656.peg.293 CDS NC_015571.1 339224 340588 2 + 1365 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.148656.peg.294 CDS NC_015571.1 342868 340583 -1 - 2286 FIG00935898: hypothetical protein - none -
fig|6666666.148656.peg.295 CDS NC_015571.1 343339 342959 -1 - 381 FIG00936505: hypothetical protein - none -
fig|6666666.148656.peg.296 CDS NC_015571.1 343489 343352 -1 - 138 FIG00936046: hypothetical protein - none -
fig|6666666.148656.peg.297 CDS NC_015571.1 344262 343987 -3 - 276 hypothetical protein - none -
fig|6666666.148656.peg.298 CDS NC_015571.1 344514 345383 3 + 870 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.148656.peg.299 CDS NC_015571.1 345412 346065 1 + 654 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148656.peg.300 CDS NC_015571.1 346842 346171 -3 - 672 lipoprotein PG3 - none -
fig|6666666.148656.peg.301 CDS NC_015571.1 347888 346908 -2 - 981 putative dihydropyrimidine dehydrogenase [NADP+] precursor - none -
fig|6666666.148656.peg.302 CDS NC_015571.1 348984 348700 -3 - 285 Mobile element protein - none -
fig|6666666.148656.peg.303 CDS NC_015571.1 349674 349507 -3 - 168 hypothetical protein - none -
fig|6666666.148656.peg.304 CDS NC_015571.1 349834 349691 -1 - 144 hypothetical protein - none -
fig|6666666.148656.peg.305 CDS NC_015571.1 349931 351118 2 + 1188 sensor histidine kinase - none -
fig|6666666.148656.peg.306 CDS NC_015571.1 351576 353330 3 + 1755 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.148656.peg.307 CDS NC_015571.1 353345 354382 2 + 1038 FIG00936511: hypothetical protein - none -
fig|6666666.148656.peg.308 CDS NC_015571.1 354513 356213 3 + 1701 FIG00935736: hypothetical protein - none -
fig|6666666.148656.peg.309 CDS NC_015571.1 356246 357430 2 + 1185 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.148656.peg.310 CDS NC_015571.1 357430 358023 1 + 594 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.148656.peg.311 CDS NC_015571.1 358037 358420 2 + 384 hypothetical protein - none -
fig|6666666.148656.peg.312 CDS NC_015571.1 358427 358609 2 + 183 hypothetical protein - none -
fig|6666666.148656.peg.313 CDS NC_015571.1 358713 360194 3 + 1482 COG1649 predicted glycoside hydrolase - none -
fig|6666666.148656.peg.314 CDS NC_015571.1 360199 362241 1 + 2043 putative helicase - none -
fig|6666666.148656.peg.315 CDS NC_015571.1 363517 362339 -1 - 1179 FIG00936515: hypothetical protein - none -
fig|6666666.148656.peg.316 CDS NC_015571.1 366654 363535 -3 - 3120 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.148656.peg.317 CDS NC_015571.1 367852 366674 -1 - 1179 Cation efflux system protein - none -
fig|6666666.148656.peg.318 CDS NC_015571.1 368811 368392 -3 - 420 FIG00936254: hypothetical protein - none -
fig|6666666.148656.peg.319 CDS NC_015571.1 370397 368883 -2 - 1515 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.148656.peg.320 CDS NC_015571.1 371193 370402 -3 - 792 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.148656.peg.321 CDS NC_015571.1 372581 371193 -2 - 1389 N-acetylglucosamine deacetylase (EC 3.5.1.-) / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.148656.peg.322 CDS NC_015571.1 373609 372560 -1 - 1050 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.148656.peg.323 CDS NC_015571.1 374532 373702 -3 - 831 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.148656.peg.324 CDS NC_015571.1 375634 374549 -1 - 1086 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.148656.peg.325 CDS NC_015571.1 376825 375659 -1 - 1167 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.148656.peg.326 CDS NC_015571.1 377795 376854 -2 - 942 Hemagglutinin - none -
fig|6666666.148656.peg.327 CDS NC_015571.1 378073 377858 -1 - 216 FIG00936191: hypothetical protein - none -
fig|6666666.148656.peg.328 CDS NC_015571.1 378314 378075 -2 - 240 hypothetical protein - none -
fig|6666666.148656.peg.329 CDS NC_015571.1 378500 380515 2 + 2016 FIG00936482: hypothetical protein - none -
fig|6666666.148656.peg.330 CDS NC_015571.1 380577 381479 3 + 903 FIG00935759: hypothetical protein - none -
fig|6666666.148656.peg.331 CDS NC_015571.1 381485 382270 2 + 786 FIG00936274: hypothetical protein - none -
fig|6666666.148656.peg.332 CDS NC_015571.1 382365 383564 3 + 1200 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.148656.peg.333 CDS NC_015571.1 383564 385009 2 + 1446 Alpha-galactosidase (EC 3.2.1.22) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization
fig|6666666.148656.peg.334 CDS NC_015571.1 385672 385028 -1 - 645 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.148656.peg.335 CDS NC_015571.1 386868 385678 -3 - 1191 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.148656.peg.336 CDS NC_015571.1 387655 387014 -1 - 642 Arabinose 5-phosphate isomerase (EC 5.3.1.13) KDO2-Lipid A biosynthesis
fig|6666666.148656.peg.337 CDS NC_015571.1 387834 389051 3 + 1218 putative zinc protease ymxG - none -
fig|6666666.148656.peg.338 CDS NC_015571.1 389201 389356 2 + 156 hypothetical protein - none -
fig|6666666.148656.peg.339 CDS NC_015571.1 390083 390562 2 + 480 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.148656.peg.340 CDS NC_015571.1 391965 390691 -3 - 1275 ABC-type multidrug transport system, permease component - none -
fig|6666666.148656.peg.341 CDS NC_015571.1 391850 391990 2 + 141 hypothetical protein - none -
fig|6666666.148656.peg.342 CDS NC_015571.1 393133 391967 -1 - 1167 ABC-type multidrug transport system, permease component - none -
fig|6666666.148656.peg.343 CDS NC_015571.1 394146 393151 -3 - 996 Type I secretion system, membrane fusion protein LapC - none -
fig|6666666.148656.peg.344 CDS NC_015571.1 395701 394196 -1 - 1506 Type I secretion system, outer membrane component LapE - none -
fig|6666666.148656.peg.345 CDS NC_015571.1 396097 396216 1 + 120 hypothetical protein - none -
fig|6666666.148656.peg.346 CDS NC_015571.1 399295 396620 -1 - 2676 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.148656.peg.347 CDS NC_015571.1 400316 399588 -2 - 729 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.148656.peg.348 CDS NC_015571.1 403226 400359 -2 - 2868 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.148656.peg.349 CDS NC_015571.1 403880 403996 2 + 117 hypothetical protein - none -
fig|6666666.148656.peg.350 CDS NC_015571.1 404341 404228 -1 - 114 hypothetical protein - none -
fig|6666666.148656.peg.351 CDS NC_015571.1 405982 406143 1 + 162 hypothetical protein - none -
fig|6666666.148656.peg.352 CDS NC_015571.1 411049 410147 -1 - 903 Mobile element protein - none -
fig|6666666.148656.peg.353 CDS NC_015571.1 412247 411156 -2 - 1092 Mobile element protein - none -
fig|6666666.148656.peg.354 CDS NC_015571.1 412738 414765 1 + 2028 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.148656.peg.355 CDS NC_015571.1 415472 415350 -2 - 123 Mobile element protein - none -
fig|6666666.148656.peg.356 CDS NC_015571.1 416110 417246 1 + 1137 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.148656.peg.357 CDS NC_015571.1 417512 418702 2 + 1191 UDP-N-acetyl-D-mannosaminuronate dehydrogenase - none -
fig|6666666.148656.peg.358 CDS NC_015571.1 418885 418998 1 + 114 hypothetical protein - none -
fig|6666666.148656.peg.359 CDS NC_015571.1 418988 419974 2 + 987 probable glycosyltransferase - none -
fig|6666666.148656.peg.360 CDS NC_015571.1 419944 421149 1 + 1206 hypothetical protein - none -
fig|6666666.148656.peg.361 CDS NC_015571.1 421159 422217 1 + 1059 glycosyl transferase, group 1 family protein - none -
fig|6666666.148656.peg.362 CDS NC_015571.1 422302 423636 1 + 1335 capsular polysaccharide biosynthesis protein Rhamnose containing glycans
fig|6666666.148656.peg.363 CDS NC_015571.1 423931 424410 1 + 480 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.364 CDS NC_015571.1 424839 424717 -3 - 123 hypothetical protein - none -
fig|6666666.148656.peg.365 CDS NC_015571.1 425021 424896 -2 - 126 hypothetical protein - none -
fig|6666666.148656.peg.366 CDS NC_015571.1 425068 426153 1 + 1086 FIG00936240: hypothetical protein - none -
fig|6666666.148656.peg.367 CDS NC_015571.1 426123 427214 3 + 1092 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster - none -
fig|6666666.148656.peg.368 CDS NC_015571.1 427256 427954 2 + 699 Probable UDP-N-acetyl-D-mannosaminuronic acid transferase (EC 2.4.1.-) - none -
fig|6666666.148656.peg.369 CDS NC_015571.1 427960 429120 1 + 1161 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) - none -
fig|6666666.148656.peg.370 CDS NC_015571.1 429426 429692 3 + 267 DNA-binding protein HU-beta DNA structural proteins, bacterial
fig|6666666.148656.peg.371 CDS NC_015571.1 429887 430462 2 + 576 FIG00936171: hypothetical protein - none -
fig|6666666.148656.peg.372 CDS NC_015571.1 431142 430522 -3 - 621 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.148656.peg.373 CDS NC_015571.1 431694 431146 -3 - 549 FIG00935729: hypothetical protein - none -
fig|6666666.148656.peg.374 CDS NC_015571.1 433109 431691 -2 - 1419 Alkaline phosphodiesterase I (EC 3.1.4.1) / Nucleotide pyrophosphatase (EC 3.6.1.9) Purine conversions
fig|6666666.148656.peg.375 CDS NC_015571.1 433228 433061 -1 - 168 FIG00936565: hypothetical protein - none -
fig|6666666.148656.peg.376 CDS NC_015571.1 433467 434459 3 + 993 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.148656.peg.377 CDS NC_015571.1 434466 435440 3 + 975 FIG00936315: hypothetical protein - none -
fig|6666666.148656.peg.378 CDS NC_015571.1 435457 436605 1 + 1149 FIG00936601: hypothetical protein - none -
fig|6666666.148656.peg.379 CDS NC_015571.1 437490 436744 -3 - 747 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.148656.peg.380 CDS NC_015571.1 437539 437664 1 + 126 hypothetical protein - none -
fig|6666666.148656.peg.381 CDS NC_015571.1 439084 437774 -1 - 1311 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase - none -
fig|6666666.148656.peg.382 CDS NC_015571.1 440586 439081 -3 - 1506 FIG00935555: hypothetical protein - none -
fig|6666666.148656.peg.383 CDS NC_015571.1 441957 440605 -3 - 1353 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.148656.peg.384 CDS NC_015571.1 442765 441989 -1 - 777 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) ECSIG4-SIG7;
RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.148656.peg.385 CDS NC_015571.1 442896 443945 3 + 1050 putative dolichol-P-glucose synthetase - none -
fig|6666666.148656.peg.386 CDS NC_015571.1 443976 445430 3 + 1455 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.148656.peg.387 CDS NC_015571.1 445545 446426 3 + 882 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.148656.peg.388 CDS NC_015571.1 447962 446607 -2 - 1356 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.148656.peg.389 CDS NC_015571.1 448679 447972 -2 - 708 FIG00937393: hypothetical protein - none -
fig|6666666.148656.peg.390 CDS NC_015571.1 449568 448699 -3 - 870 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.148656.peg.391 CDS NC_015571.1 450352 449576 -1 - 777 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.148656.peg.392 CDS NC_015571.1 451446 450568 -3 - 879 N-carbamoylputrescine amidase (3.5.1.53) / Aliphatic amidase AmiE (EC 3.5.1.4) Polyamine Metabolism
fig|6666666.148656.peg.393 CDS NC_015571.1 452489 451464 -2 - 1026 Agmatine deiminase (EC 3.5.3.12) Polyamine Metabolism
fig|6666666.148656.peg.394 CDS NC_015571.1 453226 452840 -1 - 387 putative protein-export membrane protein - none -
fig|6666666.148656.peg.395 CDS NC_015571.1 453909 453229 -3 - 681 FIG00936113: hypothetical protein - none -
fig|6666666.148656.peg.396 CDS NC_015571.1 454488 453949 -3 - 540 FIG00936439: hypothetical protein - none -
fig|6666666.148656.peg.397 CDS NC_015571.1 455728 454475 -1 - 1254 Transcriptional regulator - none -
fig|6666666.148656.peg.398 CDS NC_015571.1 457024 455756 -1 - 1269 FIG00936180: hypothetical protein - none -
fig|6666666.148656.peg.399 CDS NC_015571.1 458365 457061 -1 - 1305 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.148656.peg.400 CDS NC_015571.1 459315 458362 -3 - 954 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.148656.peg.401 CDS NC_015571.1 460478 459342 -2 - 1137 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) Polyamine Metabolism
fig|6666666.148656.peg.402 CDS NC_015571.1 462251 460488 -2 - 1764 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.148656.peg.403 CDS NC_015571.1 462336 462449 3 + 114 hypothetical protein - none -
fig|6666666.148656.peg.404 CDS NC_015571.1 463674 462682 -3 - 993 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.148656.peg.405 CDS NC_015571.1 463699 464580 1 + 882 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.148656.peg.406 CDS NC_015571.1 464577 465065 3 + 489 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.148656.peg.407 CDS NC_015571.1 465049 465789 1 + 741 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148656.peg.408 CDS NC_015571.1 467934 465919 -3 - 2016 Endothelin-converting enzyme 1 precursor (EC 3.4.24.71) - none -
fig|6666666.148656.peg.409 CDS NC_015571.1 468909 468007 -3 - 903 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.148656.peg.410 CDS NC_015571.1 469136 469249 2 + 114 hypothetical protein - none -
fig|6666666.148656.peg.411 CDS NC_015571.1 469910 469329 -2 - 582 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.148656.peg.412 CDS NC_015571.1 471709 470060 -1 - 1650 Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90) Glycolysis and Gluconeogenesis
fig|6666666.148656.peg.413 CDS NC_015571.1 472207 471905 -1 - 303 FIG00936587: hypothetical protein - none -
fig|6666666.148656.peg.414 CDS NC_015571.1 472631 472194 -2 - 438 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.148656.peg.415 CDS NC_015571.1 473194 472637 -1 - 558 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Translation termination factors bacterial
fig|6666666.148656.peg.416 CDS NC_015571.1 473914 473336 -1 - 579 LSU ribosomal protein L25p Ribosome LSU bacterial
fig|6666666.148656.peg.417 CDS NC_015571.1 473994 474113 3 + 120 hypothetical protein - none -
fig|6666666.148656.peg.418 CDS NC_015571.1 474525 476567 3 + 2043 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.148656.peg.419 CDS NC_015571.1 476597 478369 2 + 1773 5@1-nucleotidase (EC 3.1.3.5); 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16); Putative UDP-sugar hydrolase (EC 3.6.1.45) CBSS-226186.1.peg.4416;
Purine conversions;
Purine conversions;
pyrimidine conversions;
pyrimidine conversions
fig|6666666.148656.peg.420 CDS NC_015571.1 478366 479148 1 + 783 exonuclease - none -
fig|6666666.148656.peg.421 CDS NC_015571.1 479590 479210 -1 - 381 transcriptional regulator, putative - none -
fig|6666666.148656.peg.422 CDS NC_015571.1 482312 479634 -2 - 2679 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.148656.peg.423 CDS NC_015571.1 483483 485180 3 + 1698 FIG00936212: hypothetical protein - none -
fig|6666666.148656.peg.424 CDS NC_015571.1 485277 486233 3 + 957 FIG00935585: hypothetical protein - none -
fig|6666666.148656.peg.425 CDS NC_015571.1 486533 487873 2 + 1341 lipoprotein, putative - none -
fig|6666666.148656.peg.426 CDS NC_015571.1 487882 488883 1 + 1002 immunoreactive 32 kDa antigen PG49 - none -
fig|6666666.148656.peg.427 CDS NC_015571.1 488941 492960 1 + 4020 FIG00935890: hypothetical protein - none -
fig|6666666.148656.peg.428 CDS NC_015571.1 493903 497013 1 + 3111 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.148656.peg.429 CDS NC_015571.1 497047 498558 1 + 1512 lipoprotein RagB - none -
fig|6666666.148656.peg.430 CDS NC_015571.1 498652 499608 1 + 957 hemagglutinin, putative - none -
fig|6666666.148656.peg.431 CDS NC_015571.1 499814 501184 2 + 1371 FIG00936185: hypothetical protein - none -
fig|6666666.148656.peg.432 CDS NC_015571.1 501324 501878 3 + 555 FIG00936563: hypothetical protein - none -
fig|6666666.148656.peg.433 CDS NC_015571.1 501956 502720 2 + 765 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.148656.peg.434 CDS NC_015571.1 502738 505413 1 + 2676 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.148656.peg.435 CDS NC_015571.1 505470 505994 3 + 525 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.148656.peg.436 CDS NC_015571.1 506029 506520 1 + 492 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.148656.peg.437 CDS NC_015571.1 506853 507431 3 + 579 Rubrerythrin Oxidative stress;
Rubrerythrin
fig|6666666.148656.peg.438 CDS NC_015571.1 507709 510534 1 + 2826 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.148656.peg.439 CDS NC_015571.1 511275 511472 3 + 198 Mobile element protein - none -
fig|6666666.148656.peg.440 CDS NC_015571.1 511800 512339 3 + 540 FIG00936229: hypothetical protein - none -
fig|6666666.148656.peg.441 CDS NC_015571.1 512960 512292 -2 - 669 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.148656.peg.442 CDS NC_015571.1 513219 512989 -3 - 231 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.148656.peg.443 CDS NC_015571.1 513638 513225 -2 - 414 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.148656.peg.444 CDS NC_015571.1 514381 513635 -1 - 747 uroporphyrinogen-III synthase HemD, putative - none -
fig|6666666.148656.peg.445 CDS NC_015571.1 515133 514372 -3 - 762 FIG00935602: hypothetical protein - none -
fig|6666666.148656.peg.446 CDS NC_015571.1 515348 515130 -2 - 219 FIG00936334: hypothetical protein - none -
fig|6666666.148656.peg.447 CDS NC_015571.1 516961 515381 -1 - 1581 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.148656.peg.448 CDS NC_015571.1 517941 518726 3 + 786 Formate efflux transporter (TC 2.A.44 family) - none -
fig|6666666.148656.peg.449 CDS NC_015571.1 520629 518821 -3 - 1809 Cobalt-precorrin-6x reductase (EC 1.3.1.54) / Cobalt-precorrin-6 synthase, anaerobic Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.450 CDS NC_015571.1 522470 520626 -2 - 1845 Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.451 CDS NC_015571.1 522789 522475 -3 - 315 hypothetical protein - none -
fig|6666666.148656.peg.452 CDS NC_015571.1 523339 523121 -1 - 219 hypothetical protein - none -
fig|6666666.148656.peg.453 CDS NC_015571.1 524577 523336 -3 - 1242 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.454 CDS NC_015571.1 526090 524570 -1 - 1521 Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.455 CDS NC_015571.1 526525 527025 1 + 501 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.148656.peg.456 CDS NC_015571.1 527022 527510 3 + 489 FIG00936592: hypothetical protein - none -
fig|6666666.148656.peg.457 CDS NC_015571.1 527566 528018 1 + 453 FIG00935934: hypothetical protein - none -
fig|6666666.148656.peg.458 CDS NC_015571.1 528052 528945 1 + 894 FIG00936442: hypothetical protein - none -
fig|6666666.148656.peg.459 CDS NC_015571.1 528959 529816 2 + 858 FIG00935824: hypothetical protein - none -
fig|6666666.148656.peg.460 CDS NC_015571.1 530399 530280 -2 - 120 hypothetical protein - none -
fig|6666666.148656.peg.461 CDS NC_015571.1 531074 530526 -2 - 549 hypothetical protein - none -
fig|6666666.148656.peg.462 CDS NC_015571.1 531350 531129 -2 - 222 hypothetical protein - none -
fig|6666666.148656.peg.463 CDS NC_015571.1 531896 531429 -2 - 468 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.464 CDS NC_015571.1 532078 533163 1 + 1086 Mobile element protein - none -
fig|6666666.148656.peg.465 CDS NC_015571.1 533854 533582 -1 - 273 FIG00936583: hypothetical protein - none -
fig|6666666.148656.peg.466 CDS NC_015571.1 534351 533860 -3 - 492 putative DNA polymerase III epsilon chain - none -
fig|6666666.148656.peg.467 CDS NC_015571.1 534993 534355 -3 - 639 Multiple antibiotic resistance protein marC - none -
fig|6666666.148656.peg.468 CDS NC_015571.1 537868 535175 -1 - 2694 FIG00935601: hypothetical protein - none -
fig|6666666.148656.peg.469 CDS NC_015571.1 539315 537930 -2 - 1386 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.148656.peg.470 CDS NC_015571.1 540286 539363 -1 - 924 NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18) Dimethylarginine metabolism
fig|6666666.148656.peg.471 CDS NC_015571.1 540762 541424 3 + 663 Transaldolase (EC 2.2.1.2) Pentose phosphate pathway
fig|6666666.148656.peg.472 CDS NC_015571.1 541604 542719 2 + 1116 alternate gene name: yzbB - none -
fig|6666666.148656.peg.473 CDS NC_015571.1 545263 542798 -1 - 2466 zinc carboxypeptidase, putative - none -
fig|6666666.148656.peg.474 CDS NC_015571.1 545470 545586 1 + 117 hypothetical protein - none -
fig|6666666.148656.peg.475 CDS NC_015571.1 546663 546040 -3 - 624 immunoreactive 23 kDa antigen PG66 - none -
fig|6666666.148656.peg.476 CDS NC_015571.1 546880 548481 1 + 1602 carboxyl-terminal protease - none -
fig|6666666.148656.peg.477 CDS NC_015571.1 548553 550073 3 + 1521 FIG00936169: hypothetical protein - none -
fig|6666666.148656.peg.478 CDS NC_015571.1 550107 550775 3 + 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.148656.peg.479 CDS NC_015571.1 551423 551250 -2 - 174 hypothetical protein - none -
fig|6666666.148656.peg.480 CDS NC_015571.1 552533 551718 -2 - 816 5@1-nucleotidase YjjG (EC 3.1.3.5) Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.148656.peg.481 CDS NC_015571.1 553537 552683 -1 - 855 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148656.peg.482 CDS NC_015571.1 554283 553582 -3 - 702 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.148656.peg.483 CDS NC_015571.1 554775 554299 -3 - 477 hypothetical protein - none -
fig|6666666.148656.peg.484 CDS NC_015571.1 556208 555096 -2 - 1113 UspA - none -
fig|6666666.148656.peg.485 CDS NC_015571.1 556627 556373 -1 - 255 FIG00935945: hypothetical protein - none -
fig|6666666.148656.peg.486 CDS NC_015571.1 557135 556833 -2 - 303 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.148656.peg.487 CDS NC_015571.1 559121 557262 -2 - 1860 Pyruvate carboxylase (EC 6.4.1.1) / Biotin carboxyl carrier protein Fatty Acid Biosynthesis FASII
fig|6666666.148656.peg.488 CDS NC_015571.1 559404 559228 -3 - 177 hypothetical protein - none -
fig|6666666.148656.peg.489 CDS NC_015571.1 559550 559401 -2 - 150 hypothetical protein - none -
fig|6666666.148656.peg.490 CDS NC_015571.1 559758 559612 -3 - 147 hypothetical protein - none -
fig|6666666.148656.peg.491 CDS NC_015571.1 559921 561006 1 + 1086 Mobile element protein - none -
fig|6666666.148656.peg.492 CDS NC_015571.1 561324 561782 3 + 459 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.148656.peg.493 CDS NC_015571.1 561829 563163 1 + 1335 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.148656.peg.494 CDS NC_015571.1 563256 566195 3 + 2940 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.148656.peg.495 CDS NC_015571.1 566224 566715 1 + 492 FIG00935510: hypothetical protein - none -
fig|6666666.148656.peg.496 CDS NC_015571.1 566749 568200 1 + 1452 Iron-sulfur cluster assembly protein SufB Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.148656.peg.497 CDS NC_015571.1 568240 568992 1 + 753 Iron-sulfur cluster assembly ATPase protein SufC Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.148656.peg.498 CDS NC_015571.1 568999 570342 1 + 1344 Iron-sulfur cluster assembly protein SufD Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.148656.peg.499 CDS NC_015571.1 570351 570524 3 + 174 hypothetical protein - none -
fig|6666666.148656.peg.500 CDS NC_015571.1 571286 572578 2 + 1293 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.148656.peg.501 CDS NC_015571.1 572598 573665 3 + 1068 Glycosyl transferase, group 2 family protein - none -
fig|6666666.148656.peg.502 CDS NC_015571.1 574596 574396 -3 - 201 transposase in ISPg1 - none -
fig|6666666.148656.peg.503 CDS NC_015571.1 574768 576561 1 + 1794 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.148656.peg.504 CDS NC_015571.1 576566 577651 2 + 1086 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.148656.peg.505 CDS NC_015571.1 577708 578472 1 + 765 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.148656.peg.506 CDS NC_015571.1 578545 579471 1 + 927 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.148656.peg.507 CDS NC_015571.1 579522 579992 3 + 471 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.148656.peg.508 CDS NC_015571.1 580010 581338 2 + 1329 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.148656.peg.509 CDS NC_015571.1 581374 581970 1 + 597 FIG00936244: hypothetical protein - none -
fig|6666666.148656.peg.510 CDS NC_015571.1 583093 582584 -1 - 510 Thioredoxin CBSS-315749.4.peg.3658
fig|6666666.148656.peg.511 CDS NC_015571.1 584358 583231 -3 - 1128 FIG00935709: hypothetical protein - none -
fig|6666666.148656.peg.512 CDS NC_015571.1 584449 586113 1 + 1665 Uridine kinase (EC 2.7.1.48) pyrimidine conversions
fig|6666666.148656.peg.513 CDS NC_015571.1 587157 588017 3 + 861 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation;
KDO2-Lipid A biosynthesis
fig|6666666.148656.peg.514 CDS NC_015571.1 588264 589691 3 + 1428 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.148656.peg.515 CDS NC_015571.1 589831 589697 -1 - 135 hypothetical protein - none -
fig|6666666.148656.peg.516 CDS NC_015571.1 589838 590746 2 + 909 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.148656.peg.517 CDS NC_015571.1 590743 591777 1 + 1035 FIG00936071: hypothetical protein - none -
fig|6666666.148656.peg.518 CDS NC_015571.1 591844 592803 1 + 960 Glucokinase (EC 2.7.1.2) Glycolysis and Gluconeogenesis
fig|6666666.148656.peg.519 CDS NC_015571.1 592971 593342 3 + 372 MutT/nudix family protein - none -
fig|6666666.148656.peg.520 CDS NC_015571.1 593339 594250 2 + 912 FIG00936023: hypothetical protein - none -
fig|6666666.148656.peg.521 CDS NC_015571.1 594247 594684 1 + 438 FIG00936714: hypothetical protein - none -
fig|6666666.148656.peg.522 CDS NC_015571.1 595650 594724 -3 - 927 integrase/recombinase XerD - none -
fig|6666666.148656.peg.523 CDS NC_015571.1 595767 596192 3 + 426 3-dehydroquinate dehydratase II (EC 4.2.1.10) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.148656.peg.524 CDS NC_015571.1 596299 596943 1 + 645 O-methyltransferase - none -
fig|6666666.148656.peg.525 CDS NC_015571.1 597025 597528 1 + 504 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.148656.peg.526 CDS NC_015571.1 598215 597724 -3 - 492 cytidine/deoxycytidylate deaminase family protein( EC:3.5.4.3 ) - none -
fig|6666666.148656.peg.527 CDS NC_015571.1 599111 598248 -2 - 864 FIG00935924: hypothetical protein - none -
fig|6666666.148656.peg.528 CDS NC_015571.1 600539 599121 -2 - 1419 PDZ domain protein - none -
fig|6666666.148656.peg.529 CDS NC_015571.1 601055 600573 -2 - 483 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS DNA repair system including RecA, MutS and a hypothetical protein;
NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.148656.peg.530 CDS NC_015571.1 602104 601055 -1 - 1050 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.148656.peg.531 CDS NC_015571.1 602752 602498 -1 - 255 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.148656.peg.532 CDS NC_015571.1 602933 603064 2 + 132 hypothetical protein - none -
fig|6666666.148656.peg.533 CDS NC_015571.1 603148 604173 1 + 1026 Mobile element protein - none -
fig|6666666.148656.peg.534 CDS NC_015571.1 605433 605564 3 + 132 hypothetical protein - none -
fig|6666666.148656.peg.535 CDS NC_015571.1 605648 606733 2 + 1086 Mobile element protein - none -
fig|6666666.148656.peg.536 CDS NC_015571.1 609467 607272 -2 - 2196 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.148656.peg.537 CDS NC_015571.1 611032 609521 -1 - 1512 putative auxin-regulated protein - none -
fig|6666666.148656.peg.538 CDS NC_015571.1 612916 611066 -1 - 1851 ABC transporter, ATP-binding protein, MsbA family - none -
fig|6666666.148656.peg.539 CDS NC_015571.1 613572 616322 3 + 2751 FIG00935738: hypothetical protein - none -
fig|6666666.148656.peg.540 CDS NC_015571.1 616899 617075 3 + 177 hypothetical protein - none -
fig|6666666.148656.peg.541 CDS NC_015571.1 617385 617167 -3 - 219 hypothetical protein - none -
fig|6666666.148656.peg.542 CDS NC_015571.1 617418 618062 3 + 645 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.148656.peg.543 CDS NC_015571.1 618099 618503 3 + 405 Rhodanese-like domain protein - none -
fig|6666666.148656.peg.544 CDS NC_015571.1 618644 620938 2 + 2295 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.148656.peg.545 CDS NC_015571.1 620963 623266 2 + 2304 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.148656.peg.546 CDS NC_015571.1 623651 623424 -2 - 228 hypothetical protein - none -
fig|6666666.148656.peg.547 CDS NC_015571.1 623818 624171 1 + 354 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.148656.peg.548 CDS NC_015571.1 624192 624554 3 + 363 FIG00936163: hypothetical protein - none -
fig|6666666.148656.peg.549 CDS NC_015571.1 624726 624595 -3 - 132 FIG00936092: hypothetical protein - none -
fig|6666666.148656.peg.550 CDS NC_015571.1 624712 625548 1 + 837 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.148656.peg.551 CDS NC_015571.1 625584 627632 3 + 2049 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.148656.peg.552 CDS NC_015571.1 627650 628435 2 + 786 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.148656.peg.553 CDS NC_015571.1 628493 630457 2 + 1965 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.148656.peg.554 CDS NC_015571.1 630450 632258 3 + 1809 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.148656.peg.555 CDS NC_015571.1 637252 633278 -1 - 3975 Type II restriction endonuclease - none -
fig|6666666.148656.peg.556 CDS NC_015571.1 638275 637262 -1 - 1014 type II DNA modification methyltransferase, putative - none -
fig|6666666.148656.peg.557 CDS NC_015571.1 638736 638521 -3 - 216 hypothetical protein - none -
fig|6666666.148656.peg.558 CDS NC_015571.1 639329 640429 2 + 1101 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.148656.peg.559 CDS NC_015571.1 640453 641175 1 + 723 Molybdopterin biosynthesis protein MoeB - none -
fig|6666666.148656.peg.560 CDS NC_015571.1 641172 641831 3 + 660 Lipoprotein releasing system ATP-binding protein LolD Lipoprotein sorting system
fig|6666666.148656.peg.561 CDS NC_015571.1 641861 642565 2 + 705 Conserved domain protein - none -
fig|6666666.148656.peg.562 CDS NC_015571.1 642572 643174 2 + 603 Hypothetical YciO protein, TsaC/YrdC paralog - none -
fig|6666666.148656.peg.563 CDS NC_015571.1 643655 644125 2 + 471 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.148656.peg.564 CDS NC_015571.1 644140 644529 1 + 390 HIT family protein - none -
fig|6666666.148656.peg.565 CDS NC_015571.1 645637 645161 -1 - 477 hypothetical protein - none -
fig|6666666.148656.peg.566 CDS NC_015571.1 646920 645634 -3 - 1287 Alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.148656.peg.567 CDS NC_015571.1 648188 646917 -2 - 1272 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.148656.peg.568 CDS NC_015571.1 650152 648176 -1 - 1977 Putative glycogen debranching enzyme, archaeal type, TIGR01561 Glycogen metabolism
fig|6666666.148656.peg.569 CDS NC_015571.1 650428 650282 -1 - 147 hypothetical protein - none -
fig|6666666.148656.peg.570 CDS NC_015571.1 650504 650677 2 + 174 hypothetical protein - none -
fig|6666666.148656.peg.571 CDS NC_015571.1 651340 650639 -1 - 702 ATP-binding protein - none -
fig|6666666.148656.peg.572 CDS NC_015571.1 652655 651375 -2 - 1281 FIG00936249: hypothetical protein - none -
fig|6666666.148656.peg.573 CDS NC_015571.1 652659 652832 3 + 174 FIG00935774: hypothetical protein - none -
fig|6666666.148656.peg.574 CDS NC_015571.1 654279 652966 -3 - 1314 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.148656.peg.575 CDS NC_015571.1 654518 656125 2 + 1608 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.148656.peg.576 CDS NC_015571.1 656537 656325 -2 - 213 hemagglutinin-related protein - none -
fig|6666666.148656.peg.577 CDS NC_015571.1 656899 656537 -1 - 363 hemagglutinin-related protein - none -
fig|6666666.148656.peg.578 CDS NC_015571.1 657494 657123 -2 - 372 hypothetical protein - none -
fig|6666666.148656.peg.579 CDS NC_015571.1 657724 657611 -1 - 114 hypothetical protein - none -
fig|6666666.148656.peg.580 CDS NC_015571.1 659366 659527 2 + 162 hypothetical protein - none -
fig|6666666.148656.peg.581 CDS NC_015571.1 663493 663317 -1 - 177 hypothetical protein - none -
fig|6666666.148656.peg.582 CDS NC_015571.1 663617 663790 2 + 174 hypothetical protein - none -
fig|6666666.148656.peg.583 CDS NC_015571.1 665607 664240 -3 - 1368 Outer membrane efflux protein - none -
fig|6666666.148656.peg.584 CDS NC_015571.1 666710 665604 -2 - 1107 Membrane fusion efflux protein - none -
fig|6666666.148656.peg.585 CDS NC_015571.1 668042 666780 -2 - 1263 ABC transporter permease protein - none -
fig|6666666.148656.peg.586 CDS NC_015571.1 669339 668065 -3 - 1275 ABC transporter permease protein - none -
fig|6666666.148656.peg.587 CDS NC_015571.1 670023 669364 -3 - 660 ABC transporter ATP-binding protein YvcR - none -
fig|6666666.148656.peg.588 CDS NC_015571.1 670449 670042 -3 - 408 FIG00936421: hypothetical protein - none -
fig|6666666.148656.peg.589 CDS NC_015571.1 670509 670664 3 + 156 hypothetical protein - none -
fig|6666666.148656.peg.590 CDS NC_015571.1 670932 671456 3 + 525 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.148656.peg.591 CDS NC_015571.1 671453 671845 2 + 393 hypothetical protein - none -
fig|6666666.148656.peg.592 CDS NC_015571.1 672297 672043 -3 - 255 partial transposase Orf1 in ISPg5 - none -
fig|6666666.148656.peg.593 CDS NC_015571.1 674847 672700 -3 - 2148 Methylmalonyl-CoA mutase (EC 5.4.99.2) Propionyl-CoA to Succinyl-CoA Module
fig|6666666.148656.peg.594 CDS NC_015571.1 676732 674876 -1 - 1857 Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2) - none -
fig|6666666.148656.peg.595 CDS NC_015571.1 677028 678500 3 + 1473 hypothetical protein - none -
fig|6666666.148656.peg.596 CDS NC_015571.1 679113 678943 -3 - 171 hypothetical protein - none -
fig|6666666.148656.peg.597 CDS NC_015571.1 679419 679886 3 + 468 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.598 CDS NC_015571.1 680263 680394 1 + 132 hypothetical protein - none -
fig|6666666.148656.peg.599 CDS NC_015571.1 681696 681025 -3 - 672 D-alanyl-D-alanine dipeptidase (EC 3.4.13.22) - none -
fig|6666666.148656.peg.600 CDS NC_015571.1 682951 681728 -1 - 1224 FIG00935655: hypothetical protein - none -
fig|6666666.148656.peg.601 CDS NC_015571.1 684745 682976 -1 - 1770 FIG00935583: hypothetical protein - none -
fig|6666666.148656.peg.602 CDS NC_015571.1 687780 684793 -3 - 2988 FIG00935997: hypothetical protein - none -
fig|6666666.148656.peg.603 CDS NC_015571.1 690278 688038 -2 - 2241 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I Stringent Response, (p)ppGpp metabolism
fig|6666666.148656.peg.604 CDS NC_015571.1 691740 690346 -3 - 1395 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis
fig|6666666.148656.peg.605 CDS NC_015571.1 692232 692918 3 + 687 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148656.peg.606 CDS NC_015571.1 692897 693664 2 + 768 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148656.peg.607 CDS NC_015571.1 694770 693694 -3 - 1077 carboxyl-terminal protease-related protein - none -
fig|6666666.148656.peg.608 CDS NC_015571.1 695710 694763 -1 - 948 FIG00936187: hypothetical protein - none -
fig|6666666.148656.peg.609 CDS NC_015571.1 698393 695697 -2 - 2697 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.148656.peg.610 CDS NC_015571.1 699644 698454 -2 - 1191 membrane bound regulatory protein, putative - none -
fig|6666666.148656.peg.611 CDS NC_015571.1 699837 700004 3 + 168 FIG00935788: hypothetical protein - none -
fig|6666666.148656.peg.612 CDS NC_015571.1 700078 700371 1 + 294 FIG00935788: hypothetical protein - none -
fig|6666666.148656.peg.613 CDS NC_015571.1 700427 701623 2 + 1197 Vitellogenin II precursor - none -
fig|6666666.148656.peg.614 CDS NC_015571.1 701728 703392 1 + 1665 putative hemin receptor - none -
fig|6666666.148656.peg.615 CDS NC_015571.1 703842 703687 -3 - 156 Mobile element protein - none -
fig|6666666.148656.peg.616 CDS NC_015571.1 704617 704504 -1 - 114 hypothetical protein - none -
fig|6666666.148656.peg.617 CDS NC_015571.1 704986 704792 -1 - 195 Mobile element protein - none -
fig|6666666.148656.peg.618 CDS NC_015571.1 705077 705214 2 + 138 hypothetical protein - none -
fig|6666666.148656.peg.619 CDS NC_015571.1 705307 706575 1 + 1269 hypothetical protein - none -
fig|6666666.148656.peg.620 CDS NC_015571.1 706600 707229 1 + 630 immunoreactive 23 kDa antigen PG66 - none -
fig|6666666.148656.peg.621 CDS NC_015571.1 707436 708503 3 + 1068 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.148656.peg.622 CDS NC_015571.1 708553 709707 1 + 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.148656.peg.623 CDS NC_015571.1 709807 709679 -1 - 129 hypothetical protein - none -
fig|6666666.148656.peg.624 CDS NC_015571.1 710266 709841 -1 - 426 FIG00935531: hypothetical protein - none -
fig|6666666.148656.peg.625 CDS NC_015571.1 710979 710332 -3 - 648 FIG00936164: hypothetical protein - none -
fig|6666666.148656.peg.626 CDS NC_015571.1 713473 710993 -1 - 2481 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.148656.peg.627 CDS NC_015571.1 714897 713782 -3 - 1116 Thiol:disulfide interchange protein - none -
fig|6666666.148656.peg.628 CDS NC_015571.1 715037 714894 -2 - 144 hypothetical protein - none -
fig|6666666.148656.peg.629 CDS NC_015571.1 716387 715053 -2 - 1335 DNA-damage-inducible protein F - none -
fig|6666666.148656.peg.630 CDS NC_015571.1 716881 716378 -1 - 504 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster
fig|6666666.148656.peg.631 CDS NC_015571.1 719096 716889 -2 - 2208 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.148656.peg.632 CDS NC_015571.1 719393 719130 -2 - 264 FIG00936285: hypothetical protein - none -
fig|6666666.148656.peg.633 CDS NC_015571.1 719648 719502 -2 - 147 hypothetical protein - none -
fig|6666666.148656.peg.634 CDS NC_015571.1 720120 720812 3 + 693 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.148656.peg.635 CDS NC_015571.1 720843 722786 3 + 1944 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.148656.peg.636 CDS NC_015571.1 722815 723570 1 + 756 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.148656.peg.637 CDS NC_015571.1 723803 724207 2 + 405 Methylmalonyl-CoA epimerase (EC 5.1.99.1) Propionyl-CoA to Succinyl-CoA Module
fig|6666666.148656.peg.638 CDS NC_015571.1 724306 725859 1 + 1554 Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module
fig|6666666.148656.peg.639 CDS NC_015571.1 725884 726825 1 + 942 Membrane protein associated with methylmalonyl-CoA decarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.148656.peg.640 CDS NC_015571.1 726822 727058 3 + 237 hypothetical protein - none -
fig|6666666.148656.peg.641 CDS NC_015571.1 727096 727530 1 + 435 Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.148656.peg.642 CDS NC_015571.1 727535 728686 2 + 1152 Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module
fig|6666666.148656.peg.643 CDS NC_015571.1 728934 728782 -3 - 153 Mobile element protein - none -
fig|6666666.148656.peg.644 CDS NC_015571.1 730559 733297 2 + 2739 Putative dNTP triphosphohydrolase, Archaeal subgroup Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.148656.peg.645 CDS NC_015571.1 735241 733838 -1 - 1404 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.148656.peg.646 CDS NC_015571.1 737599 735293 -1 - 2307 FIG00935792: hypothetical protein - none -
fig|6666666.148656.peg.647 CDS NC_015571.1 738195 737611 -3 - 585 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.148656.peg.648 CDS NC_015571.1 738266 738646 2 + 381 FIG00936585: hypothetical protein - none -
fig|6666666.148656.peg.649 CDS NC_015571.1 738618 739391 3 + 774 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.148656.peg.650 CDS NC_015571.1 739426 740451 1 + 1026 FIG00936504: hypothetical protein - none -
fig|6666666.148656.peg.651 CDS NC_015571.1 741273 740485 -3 - 789 FIG00935612: hypothetical protein - none -
fig|6666666.148656.peg.652 CDS NC_015571.1 741950 741270 -2 - 681 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.148656.peg.653 CDS NC_015571.1 742334 741954 -2 - 381 DnaK suppressor protein, putative - none -
fig|6666666.148656.peg.654 CDS NC_015571.1 745817 742404 -2 - 3414 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.148656.peg.655 CDS NC_015571.1 746159 746815 2 + 657 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.148656.peg.656 CDS NC_015571.1 746873 748357 2 + 1485 FIG00936522: hypothetical protein - none -
fig|6666666.148656.peg.657 CDS NC_015571.1 750988 748904 -1 - 2085 Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog CBSS-56780.10.peg.1536
fig|6666666.148656.peg.658 CDS NC_015571.1 751275 751430 3 + 156 hypothetical protein - none -
fig|6666666.148656.peg.659 CDS NC_015571.1 751755 752630 3 + 876 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.148656.peg.660 CDS NC_015571.1 752691 753458 3 + 768 Diadenylate cyclase spyDAC; Bacterial checkpoint controller DisA with nucleotide-binding domain Bacterial checkpoint-control-related cluster;
Bacterial checkpoint-control-related cluster
fig|6666666.148656.peg.661 CDS NC_015571.1 754190 753474 -2 - 717 putative membrane-associated phospholipid phosphatase - none -
fig|6666666.148656.peg.662 CDS NC_015571.1 755053 754211 -1 - 843 BatE Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148656.peg.663 CDS NC_015571.1 756798 755116 -3 - 1683 BatD Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148656.peg.664 CDS NC_015571.1 757842 757099 -3 - 744 BatC Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148656.peg.665 CDS NC_015571.1 758858 757839 -2 - 1020 BatB Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148656.peg.666 CDS NC_015571.1 759852 758869 -3 - 984 BatA (Bacteroides aerotolerance operon) Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148656.peg.667 CDS NC_015571.1 760805 759849 -2 - 957 FIG00936810: hypothetical protein - none -
fig|6666666.148656.peg.668 CDS NC_015571.1 761674 760802 -1 - 873 hypothetical protein PA3071 Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148656.peg.669 CDS NC_015571.1 762680 761685 -2 - 996 MoxR-like ATPase in aerotolerance operon Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148656.peg.670 CDS NC_015571.1 763706 762780 -2 - 927 Quinolinate synthetase (EC 2.5.1.72) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.148656.peg.671 CDS NC_015571.1 764568 763726 -3 - 843 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.148656.peg.672 CDS NC_015571.1 766156 764600 -1 - 1557 L-aspartate oxidase (EC 1.4.3.16) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.148656.peg.673 CDS NC_015571.1 767162 767905 2 + 744 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.148656.peg.674 CDS NC_015571.1 767970 768776 3 + 807 FIG00936034: hypothetical protein - none -
fig|6666666.148656.peg.675 CDS NC_015571.1 768869 770284 2 + 1416 Metallo-beta-lactamase family protein - none -
fig|6666666.148656.peg.676 CDS NC_015571.1 770257 770640 1 + 384 rhodanese-like domain protein - none -
fig|6666666.148656.peg.677 CDS NC_015571.1 770637 770768 3 + 132 hypothetical protein - none -
fig|6666666.148656.peg.678 CDS NC_015571.1 771704 770802 -2 - 903 Mobile element protein - none -
fig|6666666.148656.peg.679 CDS NC_015571.1 772534 772286 -1 - 249 Mobile element protein - none -
fig|6666666.148656.peg.680 CDS NC_015571.1 772676 774391 2 + 1716 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.148656.peg.681 CDS NC_015571.1 774416 775654 2 + 1239 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) KDO2-Lipid A biosynthesis
fig|6666666.148656.peg.682 CDS NC_015571.1 775796 777694 2 + 1899 FIG00935687: hypothetical protein - none -
fig|6666666.148656.peg.683 CDS NC_015571.1 777809 778678 2 + 870 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.148656.peg.684 CDS NC_015571.1 778693 779283 1 + 591 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.148656.peg.685 CDS NC_015571.1 779280 780137 3 + 858 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.148656.peg.686 CDS NC_015571.1 780144 781208 3 + 1065 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.148656.peg.687 CDS NC_015571.1 781283 782371 2 + 1089 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.148656.peg.688 CDS NC_015571.1 782568 782729 3 + 162 hypothetical protein - none -
fig|6666666.148656.peg.689 CDS NC_015571.1 783598 783272 -1 - 327 FIG00935708: hypothetical protein - none -
fig|6666666.148656.peg.690 CDS NC_015571.1 784182 783604 -3 - 579 hypothetical transporter PduT for various metalloporphyrins - none -
fig|6666666.148656.peg.691 CDS NC_015571.1 784924 784238 -1 - 687 FIG00935937: hypothetical protein - none -
fig|6666666.148656.peg.692 CDS NC_015571.1 789330 784921 -3 - 4410 CobN/magnesium chelatase family protein - none -
fig|6666666.148656.peg.693 CDS NC_015571.1 791307 789367 -3 - 1941 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.148656.peg.694 CDS NC_015571.1 791972 791322 -2 - 651 hmuY protein - none -
fig|6666666.148656.peg.695 CDS NC_015571.1 792291 792431 3 + 141 hypothetical protein - none -
fig|6666666.148656.peg.696 CDS NC_015571.1 792673 792870 1 + 198 hypothetical protein - none -
fig|6666666.148656.peg.697 CDS NC_015571.1 795278 792822 -2 - 2457 FIG00935712: hypothetical protein - none -
fig|6666666.148656.peg.698 CDS NC_015571.1 795923 795570 -2 - 354 hypothetical protein - none -
fig|6666666.148656.peg.699 CDS NC_015571.1 796015 795896 -1 - 120 hypothetical protein - none -
fig|6666666.148656.peg.700 CDS NC_015571.1 796687 796112 -1 - 576 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.148656.peg.701 CDS NC_015571.1 797596 796826 -1 - 771 UPF0246 protein YaaA - none -
fig|6666666.148656.peg.702 CDS NC_015571.1 798100 797681 -1 - 420 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.148656.peg.703 CDS NC_015571.1 799409 798156 -2 - 1254 Collagenase precursor (EC 3.4.-.-) - none -
fig|6666666.148656.peg.704 CDS NC_015571.1 799856 799413 -2 - 444 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.148656.peg.705 CDS NC_015571.1 800911 799859 -1 - 1053 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148656.peg.706 CDS NC_015571.1 801705 800929 -3 - 777 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.148656.peg.707 CDS NC_015571.1 802557 801715 -3 - 843 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.148656.peg.708 CDS NC_015571.1 802892 802665 -2 - 228 FIG00935882: hypothetical protein - none -
fig|6666666.148656.peg.709 CDS NC_015571.1 803766 802939 -3 - 828 Cell division protein FtsX Bacterial Cell Division
fig|6666666.148656.peg.710 CDS NC_015571.1 803768 803893 2 + 126 hypothetical protein - none -
fig|6666666.148656.peg.711 CDS NC_015571.1 805881 806090 3 + 210 transcriptional regulator, putative - none -
fig|6666666.148656.peg.712 CDS NC_015571.1 806093 806482 2 + 390 conserved domain protein - none -
fig|6666666.148656.peg.713 CDS NC_015571.1 806479 808527 1 + 2049 Toprim domain protein CBSS-315749.4.peg.3658
fig|6666666.148656.peg.714 CDS NC_015571.1 808542 808718 3 + 177 hypothetical protein - none -
fig|6666666.148656.peg.715 CDS NC_015571.1 809695 809573 -1 - 123 transposase - none -
fig|6666666.148656.peg.716 CDS NC_015571.1 810114 810001 -3 - 114 transposase - none -
fig|6666666.148656.peg.717 CDS NC_015571.1 811027 810137 -1 - 891 conserved domain protein - none -
fig|6666666.148656.peg.718 CDS NC_015571.1 813162 811024 -3 - 2139 hypothetical protein - none -
fig|6666666.148656.peg.719 CDS NC_015571.1 814614 813289 -3 - 1326 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.148656.peg.720 CDS NC_015571.1 814768 814595 -1 - 174 hypothetical protein - none -
fig|6666666.148656.peg.721 CDS NC_015571.1 815068 816519 1 + 1452 ATP-dependent DNA helicase - none -
fig|6666666.148656.peg.722 CDS NC_015571.1 816554 817705 2 + 1152 Isochorismate synthase (EC 5.4.4.2) @ Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.148656.peg.723 CDS NC_015571.1 817705 819438 1 + 1734 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.148656.peg.724 CDS NC_015571.1 819463 820281 1 + 819 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.148656.peg.725 CDS NC_015571.1 820374 821351 3 + 978 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.148656.peg.726 CDS NC_015571.1 821375 822457 2 + 1083 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.148656.peg.727 CDS NC_015571.1 822643 822801 1 + 159 hypothetical protein - none -
fig|6666666.148656.peg.728 CDS NC_015571.1 823603 822935 -1 - 669 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein - none -
fig|6666666.148656.peg.729 CDS NC_015571.1 824234 823686 -2 - 549 hypothetical protein - none -
fig|6666666.148656.peg.730 CDS NC_015571.1 826674 824245 -3 - 2430 hypothetical protein - none -
fig|6666666.148656.peg.731 CDS NC_015571.1 827154 826729 -3 - 426 hypothetical protein - none -
fig|6666666.148656.peg.732 CDS NC_015571.1 827180 827362 2 + 183 hypothetical protein - none -
fig|6666666.148656.peg.733 CDS NC_015571.1 827750 828832 2 + 1083 Mobile element protein - none -
fig|6666666.148656.peg.734 CDS NC_015571.1 829090 828908 -1 - 183 hypothetical protein - none -
fig|6666666.148656.peg.735 CDS NC_015571.1 830018 829590 -2 - 429 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.736 CDS NC_015571.1 830761 831177 1 + 417 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.737 CDS NC_015571.1 831601 831266 -1 - 336 tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.148656.peg.738 CDS NC_015571.1 833200 831884 -1 - 1317 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.148656.peg.739 CDS NC_015571.1 834181 833333 -1 - 849 transcriptional regulator, AraC family - none -
fig|6666666.148656.peg.740 CDS NC_015571.1 835935 834865 -3 - 1071 IS1478 transposase - none -
fig|6666666.148656.peg.741 CDS NC_015571.1 836786 836007 -2 - 780 mobilizable transposon, int protein - none -
fig|6666666.148656.peg.742 CDS NC_015571.1 837776 836874 -2 - 903 mobilizable transposon, tnpA protein - none -
fig|6666666.148656.peg.743 CDS NC_015571.1 839457 838033 -3 - 1425 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.148656.peg.744 CDS NC_015571.1 840511 839621 -1 - 891 GldB - none -
fig|6666666.148656.peg.745 CDS NC_015571.1 840822 841724 3 + 903 Mobile element protein - none -
fig|6666666.148656.peg.746 CDS NC_015571.1 842311 841781 -1 - 531 Mobile element protein - none -
fig|6666666.148656.peg.747 CDS NC_015571.1 842484 842939 3 + 456 Thiol peroxidase, Bcp-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.148656.peg.748 CDS NC_015571.1 842960 843982 2 + 1023 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.148656.peg.749 CDS NC_015571.1 844056 845021 3 + 966 FIG00936209: hypothetical protein - none -
fig|6666666.148656.peg.750 CDS NC_015571.1 845018 846379 2 + 1362 FIG00935947: hypothetical protein - none -
fig|6666666.148656.peg.751 CDS NC_015571.1 846376 847626 1 + 1251 FIG00936153: hypothetical protein - none -
fig|6666666.148656.peg.752 CDS NC_015571.1 847642 848742 1 + 1101 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) / Chorismate mutase I (EC 5.4.99.5) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.148656.peg.753 CDS NC_015571.1 848739 849503 3 + 765 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.148656.peg.754 CDS NC_015571.1 849812 849618 -2 - 195 hypothetical protein - none -
fig|6666666.148656.peg.755 CDS NC_015571.1 849997 851193 1 + 1197 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.148656.peg.756 CDS NC_015571.1 851229 852920 3 + 1692 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.148656.peg.757 CDS NC_015571.1 853192 853338 1 + 147 hypothetical protein - none -
fig|6666666.148656.peg.758 CDS NC_015571.1 853638 853489 -3 - 150 hypothetical protein - none -
fig|6666666.148656.peg.759 CDS NC_015571.1 855702 854050 -3 - 1653 Hydroxylamine reductase (EC 1.7.-.-) Nitrosative stress
fig|6666666.148656.peg.760 CDS NC_015571.1 856619 855927 -2 - 693 DNA repair protein RadC Bacterial cell division cluster;
DNA repair, bacterial
fig|6666666.148656.peg.761 CDS NC_015571.1 857624 860830 2 + 3207 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.148656.peg.762 CDS NC_015571.1 863040 861346 -3 - 1695 Alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.148656.peg.763 CDS NC_015571.1 863828 863037 -2 - 792 FIG00936064: hypothetical protein - none -
fig|6666666.148656.peg.764 CDS NC_015571.1 865138 863975 -1 - 1164 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.148656.peg.765 CDS NC_015571.1 866713 865184 -1 - 1530 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.148656.peg.766 CDS NC_015571.1 867041 866793 -2 - 249 FIG00936158: hypothetical protein - none -
fig|6666666.148656.peg.767 CDS NC_015571.1 869446 867221 -1 - 2226 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.148656.peg.768 CDS NC_015571.1 870012 869566 -3 - 447 Pyruvoyl-dependent arginine decarboxylase 1 (EC 4.1.1.19) - none -
fig|6666666.148656.peg.769 CDS NC_015571.1 870013 870258 1 + 246 hypothetical protein - none -
fig|6666666.148656.peg.770 CDS NC_015571.1 871075 870767 -1 - 309 hypothetical protein - none -
fig|6666666.148656.peg.771 CDS NC_015571.1 871136 871588 2 + 453 lipoprotein, putative - none -
fig|6666666.148656.peg.772 CDS NC_015571.1 872191 871700 -1 - 492 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.148656.peg.773 CDS NC_015571.1 873509 872208 -2 - 1302 Putative inner membrane protein - none -
fig|6666666.148656.peg.774 CDS NC_015571.1 874136 873564 -2 - 573 FHA domain protein - none -
fig|6666666.148656.peg.775 CDS NC_015571.1 875826 874261 -3 - 1566 O-antigen flippase Wzx KDO2-Lipid A biosynthesis
fig|6666666.148656.peg.776 CDS NC_015571.1 876887 876174 -2 - 714 hypothetical protein - none -
fig|6666666.148656.peg.777 CDS NC_015571.1 877105 877584 1 + 480 hypothetical protein - none -
fig|6666666.148656.peg.778 CDS NC_015571.1 878823 877921 -3 - 903 Mobile element protein - none -
fig|6666666.148656.peg.779 CDS NC_015571.1 879090 878977 -3 - 114 hypothetical protein - none -
fig|6666666.148656.peg.780 CDS NC_015571.1 879644 879249 -2 - 396 GtrA family protein - none -
fig|6666666.148656.peg.781 CDS NC_015571.1 880365 879610 -3 - 756 hypothetical protein - none -
fig|6666666.148656.peg.782 CDS NC_015571.1 881881 880532 -1 - 1350 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.148656.peg.783 CDS NC_015571.1 882629 881892 -2 - 738 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.148656.peg.784 CDS NC_015571.1 883998 882775 -3 - 1224 Lipoprotein releasing system transmembrane protein LolC Lipoprotein sorting system
fig|6666666.148656.peg.785 CDS NC_015571.1 884361 884026 -3 - 336 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.148656.peg.786 CDS NC_015571.1 885215 884400 -2 - 816 Acid phosphatase (EC 3.1.3.2) - none -
fig|6666666.148656.peg.787 CDS NC_015571.1 885826 885212 -1 - 615 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.148656.peg.788 CDS NC_015571.1 886181 885954 -2 - 228 FIG00936027: hypothetical protein - none -
fig|6666666.148656.peg.789 CDS NC_015571.1 886597 886181 -1 - 417 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA YjeE
fig|6666666.148656.peg.790 CDS NC_015571.1 888165 886609 -3 - 1557 Response regulator - none -
fig|6666666.148656.peg.791 CDS NC_015571.1 889421 888255 -2 - 1167 AAA+ superfamily protein - none -
fig|6666666.148656.peg.792 CDS NC_015571.1 889796 889473 -2 - 324 FIG00935959: hypothetical protein - none -
fig|6666666.148656.peg.793 CDS NC_015571.1 890511 889870 -3 - 642 FIG00936453: hypothetical protein - none -
fig|6666666.148656.peg.794 CDS NC_015571.1 890976 892121 3 + 1146 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.148656.peg.795 CDS NC_015571.1 892366 894525 1 + 2160 Translation elongation factor G-related protein Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.148656.peg.796 CDS NC_015571.1 896586 894733 -3 - 1854 putative Fe-S oxidoreductase - none -
fig|6666666.148656.peg.797 CDS NC_015571.1 897440 896616 -2 - 825 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.148656.peg.798 CDS NC_015571.1 898770 897469 -3 - 1302 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.148656.peg.799 CDS NC_015571.1 899512 898790 -1 - 723 FIG00935511: hypothetical protein - none -
fig|6666666.148656.peg.800 CDS NC_015571.1 902337 899512 -3 - 2826 Calcium-transporting ATPase - none -
fig|6666666.148656.peg.801 CDS NC_015571.1 902379 902534 3 + 156 hypothetical protein - none -
fig|6666666.148656.peg.802 CDS NC_015571.1 903290 902598 -2 - 693 Mobile element protein - none -
fig|6666666.148656.peg.803 CDS NC_015571.1 903921 904823 3 + 903 Mobile element protein - none -
fig|6666666.148656.peg.804 CDS NC_015571.1 905011 905169 1 + 159 hypothetical protein - none -
fig|6666666.148656.peg.805 CDS NC_015571.1 906452 905160 -2 - 1293 ABC transporter, permease protein, putative - none -
fig|6666666.148656.peg.806 CDS NC_015571.1 907452 906475 -3 - 978 ABC transporter, ATP-binding protein - none -
fig|6666666.148656.peg.807 CDS NC_015571.1 907928 907455 -2 - 474 FIG00936304: hypothetical protein - none -
fig|6666666.148656.peg.808 CDS NC_015571.1 907997 908773 2 + 777 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.148656.peg.809 CDS NC_015571.1 908792 909799 2 + 1008 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.148656.peg.810 CDS NC_015571.1 909967 910347 1 + 381 Glycine cleavage system H protein CBSS-315749.4.peg.3658;
Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.148656.peg.811 CDS NC_015571.1 910348 910854 1 + 507 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.148656.peg.812 CDS NC_015571.1 911028 912773 3 + 1746 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.148656.peg.813 CDS NC_015571.1 912830 913264 2 + 435 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.148656.peg.814 CDS NC_015571.1 913292 915031 2 + 1740 FIG00898077: hypothetical protein - none -
fig|6666666.148656.peg.815 CDS NC_015571.1 915028 915891 1 + 864 FIG00935705: hypothetical protein - none -
fig|6666666.148656.peg.816 CDS NC_015571.1 915903 917198 3 + 1296 peptidase, M23/M37 family, putative - none -
fig|6666666.148656.peg.817 CDS NC_015571.1 917186 918157 2 + 972 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.148656.peg.818 CDS NC_015571.1 919582 918191 -1 - 1392 Inner membrane protein YihY, formerly thought to be RNase BN LMPTP YfkJ cluster;
Riboflavin synthesis cluster
fig|6666666.148656.peg.819 CDS NC_015571.1 919718 919587 -2 - 132 hypothetical protein - none -
fig|6666666.148656.peg.820 CDS NC_015571.1 921197 920079 -2 - 1119 Septum site-determining protein MinD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
Septum site-determining cluster Min
fig|6666666.148656.peg.821 CDS NC_015571.1 921990 921217 -3 - 774 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation;
tRNA modification Bacteria
fig|6666666.148656.peg.822 CDS NC_015571.1 922328 921999 -2 - 330 FIG00897068: hypothetical protein - none -
fig|6666666.148656.peg.823 CDS NC_015571.1 923864 922383 -2 - 1482 Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type tRNA aminoacylation, Pro
fig|6666666.148656.peg.824 CDS NC_015571.1 923884 924003 1 + 120 hypothetical protein - none -
fig|6666666.148656.peg.825 CDS NC_015571.1 924390 924145 -3 - 246 FIG00936628: hypothetical protein - none -
fig|6666666.148656.peg.826 CDS NC_015571.1 925167 924457 -3 - 711 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) - none -
fig|6666666.148656.peg.827 CDS NC_015571.1 925834 925169 -1 - 666 Phosphatidylserine decarboxylase (EC 4.1.1.65) - none -
fig|6666666.148656.peg.828 CDS NC_015571.1 926174 926299 2 + 126 hypothetical protein - none -
fig|6666666.148656.peg.829 CDS NC_015571.1 926935 927852 1 + 918 Mrr restriction system protein - none -
fig|6666666.148656.peg.830 CDS NC_015571.1 929475 928258 -3 - 1218 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148656.peg.831 CDS NC_015571.1 929614 931929 1 + 2316 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.148656.peg.832 CDS NC_015571.1 932770 933762 1 + 993 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.148656.peg.833 CDS NC_015571.1 933812 934753 2 + 942 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.148656.peg.834 CDS NC_015571.1 934785 935522 3 + 738 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.148656.peg.835 CDS NC_015571.1 935519 936268 2 + 750 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.148656.peg.836 CDS NC_015571.1 936296 938620 2 + 2325 FIG00936690: hypothetical protein - none -
fig|6666666.148656.peg.837 CDS NC_015571.1 939600 940178 3 + 579 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.148656.peg.838 CDS NC_015571.1 940171 940728 1 + 558 FIG00935713: hypothetical protein - none -
fig|6666666.148656.peg.839 CDS NC_015571.1 940744 941520 1 + 777 FIG00936351: hypothetical protein - none -
fig|6666666.148656.peg.840 CDS NC_015571.1 942273 941848 -3 - 426 Mobile element protein - none -
fig|6666666.148656.peg.841 CDS NC_015571.1 942931 942362 -1 - 570 Mobile element protein - none -
fig|6666666.148656.peg.842 CDS NC_015571.1 943617 943396 -3 - 222 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.148656.peg.843 CDS NC_015571.1 944052 943855 -3 - 198 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.148656.peg.844 CDS NC_015571.1 944735 944130 -2 - 606 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.148656.peg.845 CDS NC_015571.1 946800 944839 -3 - 1962 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.148656.peg.846 CDS NC_015571.1 948287 948171 -2 - 117 hypothetical protein - none -
fig|6666666.148656.peg.847 CDS NC_015571.1 948332 949252 2 + 921 Cell division inhibitor Persister Cells
fig|6666666.148656.peg.848 CDS NC_015571.1 949384 950469 1 + 1086 Mobile element protein - none -
fig|6666666.148656.peg.849 CDS NC_015571.1 950710 950994 1 + 285 transcriptional regulator, putative - none -
fig|6666666.148656.peg.850 CDS NC_015571.1 951689 952321 2 + 633 hypothetical protein - none -
fig|6666666.148656.peg.851 CDS NC_015571.1 952325 952861 2 + 537 hypothetical protein - none -
fig|6666666.148656.peg.852 CDS NC_015571.1 952878 953030 3 + 153 hypothetical protein - none -
fig|6666666.148656.peg.853 CDS NC_015571.1 953034 953285 3 + 252 Transcriptional regulator, TetR family - none -
fig|6666666.148656.peg.854 CDS NC_015571.1 953796 953542 -3 - 255 hypothetical protein - none -
fig|6666666.148656.peg.855 CDS NC_015571.1 953773 954351 1 + 579 Bll2647 protein - none -
fig|6666666.148656.peg.856 CDS NC_015571.1 956738 954510 -2 - 2229 prolyl oligopeptidase family protein - none -
fig|6666666.148656.peg.857 CDS NC_015571.1 957841 957101 -1 - 741 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148656.peg.858 CDS NC_015571.1 960374 957870 -2 - 2505 putative TonB-dependent receptor - none -
fig|6666666.148656.peg.859 CDS NC_015571.1 960965 960594 -2 - 372 Transcriptional regulator, GntR family - none -
fig|6666666.148656.peg.860 CDS NC_015571.1 961720 960962 -1 - 759 FIG00936228: hypothetical protein - none -
fig|6666666.148656.peg.861 CDS NC_015571.1 962571 961717 -3 - 855 FIG00936394: hypothetical protein - none -
fig|6666666.148656.peg.862 CDS NC_015571.1 963412 962585 -1 - 828 ABC transporter, ATP-binding protein - none -
fig|6666666.148656.peg.863 CDS NC_015571.1 965712 964315 -3 - 1398 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.148656.peg.864 CDS NC_015571.1 966016 967512 1 + 1497 acetyl-CoA hydrolase/transferase family protein - none -
fig|6666666.148656.peg.865 CDS NC_015571.1 968092 970050 1 + 1959 TPR domain protein - none -
fig|6666666.148656.peg.866 CDS NC_015571.1 970248 970105 -3 - 144 hypothetical protein - none -
fig|6666666.148656.peg.867 CDS NC_015571.1 970416 973142 3 + 2727 Pyruvate,phosphate dikinase (EC 2.7.9.1) Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.148656.peg.868 CDS NC_015571.1 973474 973361 -1 - 114 hypothetical protein - none -
fig|6666666.148656.peg.869 CDS NC_015571.1 973493 974674 2 + 1182 FIG00936332: hypothetical protein - none -
fig|6666666.148656.peg.870 CDS NC_015571.1 974848 977658 1 + 2811 putative outer membrane receptor - none -
fig|6666666.148656.peg.871 CDS NC_015571.1 977655 979298 3 + 1644 FIG00935530: hypothetical protein - none -
fig|6666666.148656.peg.872 CDS NC_015571.1 979940 979341 -2 - 600 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.148656.peg.873 CDS NC_015571.1 980960 979947 -2 - 1014 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.148656.peg.874 CDS NC_015571.1 981119 981006 -2 - 114 hypothetical protein - none -
fig|6666666.148656.peg.875 CDS NC_015571.1 981531 982268 3 + 738 branched-chain amino acid ABC transporter, ATP-binding protein - none -
fig|6666666.148656.peg.876 CDS NC_015571.1 982265 982972 2 + 708 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) - none -
fig|6666666.148656.peg.877 CDS NC_015571.1 982969 984123 1 + 1155 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) - none -
fig|6666666.148656.peg.878 CDS NC_015571.1 984120 985406 3 + 1287 hypothetical protein - none -
fig|6666666.148656.peg.879 CDS NC_015571.1 985403 986248 2 + 846 oxidoreductase - none -
fig|6666666.148656.peg.880 CDS NC_015571.1 986255 987142 2 + 888 Nucleoside ABC transporter, permease protein 1 - none -
fig|6666666.148656.peg.881 CDS NC_015571.1 987142 988044 1 + 903 Nucleoside ABC transporter, permease protein 1 - none -
fig|6666666.148656.peg.882 CDS NC_015571.1 988060 988182 1 + 123 hypothetical protein - none -
fig|6666666.148656.peg.883 CDS NC_015571.1 988238 989935 2 + 1698 Immunoreactive 53 kDa antigen PG123 - none -
fig|6666666.148656.peg.884 CDS NC_015571.1 989999 990175 2 + 177 hypothetical protein - none -
fig|6666666.148656.peg.885 CDS NC_015571.1 990319 991659 1 + 1341 hypothetical protein - none -
fig|6666666.148656.peg.886 CDS NC_015571.1 991896 992642 3 + 747 ABC-type transport system involved in resistance to organic solvents, permease component - none -
fig|6666666.148656.peg.887 CDS NC_015571.1 992661 993395 3 + 735 ABC transporter, ATP-binding protein - none -
fig|6666666.148656.peg.888 CDS NC_015571.1 993490 994863 1 + 1374 FIG00935900: hypothetical protein - none -
fig|6666666.148656.peg.889 CDS NC_015571.1 994934 997837 2 + 2904 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.148656.peg.890 CDS NC_015571.1 997863 999242 3 + 1380 FIG00935576: hypothetical protein - none -
fig|6666666.148656.peg.891 CDS NC_015571.1 999242 1001539 2 + 2298 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.148656.peg.892 CDS NC_015571.1 1001582 1001704 2 + 123 hypothetical protein - none -
fig|6666666.148656.peg.893 CDS NC_015571.1 1003500 1001773 -3 - 1728 Dca - none -
fig|6666666.148656.peg.894 CDS NC_015571.1 1004397 1003933 -3 - 465 Arginine pathway regulatory protein ArgR, repressor of arg regulon - none -
fig|6666666.148656.peg.895 CDS NC_015571.1 1005371 1004418 -2 - 954 K+-dependent Na+/Ca+ exchanger related-protein - none -
fig|6666666.148656.peg.896 CDS NC_015571.1 1007086 1005440 -1 - 1647 Glycogen - none -
fig|6666666.148656.peg.897 CDS NC_015571.1 1009297 1007123 -1 - 2175 Ferrous iron transport protein B - none -
fig|6666666.148656.peg.898 CDS NC_015571.1 1010266 1009334 -1 - 933 iron dependent repressor, putative - none -
fig|6666666.148656.peg.899 CDS NC_015571.1 1011611 1012801 2 + 1191 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.148656.peg.900 CDS NC_015571.1 1012842 1013720 3 + 879 Mce4/Rv3499c/MTV023.06c protein - none -
fig|6666666.148656.peg.901 CDS NC_015571.1 1013766 1014623 3 + 858 FIG00936664: hypothetical protein - none -
fig|6666666.148656.peg.902 CDS NC_015571.1 1014665 1016080 2 + 1416 FIG00935626: hypothetical protein - none -
fig|6666666.148656.peg.903 CDS NC_015571.1 1016145 1016501 3 + 357 transcriptional regulator, putative - none -
fig|6666666.148656.peg.904 CDS NC_015571.1 1016518 1017204 1 + 687 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.148656.peg.905 CDS NC_015571.1 1018345 1017548 -1 - 798 thiol protease - none -
fig|6666666.148656.peg.906 CDS NC_015571.1 1018992 1018411 -3 - 582 thiol protease - none -
fig|6666666.148656.peg.907 CDS NC_015571.1 1019375 1019794 2 + 420 Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148656.peg.908 CDS NC_015571.1 1019814 1020407 3 + 594 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148656.peg.909 CDS NC_015571.1 1020429 1022447 3 + 2019 Outer membrane lipoprotein omp16 precursor Ton and Tol transport systems
fig|6666666.148656.peg.910 CDS NC_015571.1 1023376 1023849 1 + 474 thioesterase family protein - none -
fig|6666666.148656.peg.911 CDS NC_015571.1 1024544 1023960 -2 - 585 Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518 Lactate utilization
fig|6666666.148656.peg.912 CDS NC_015571.1 1025917 1024550 -1 - 1368 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.148656.peg.913 CDS NC_015571.1 1026654 1025914 -3 - 741 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.148656.peg.914 CDS NC_015571.1 1026823 1026978 1 + 156 FIG00935936: hypothetical protein - none -
fig|6666666.148656.peg.915 CDS NC_015571.1 1027450 1028499 1 + 1050 Integrase - none -
fig|6666666.148656.peg.916 CDS NC_015571.1 1028517 1028879 3 + 363 FIG00936719: hypothetical protein - none -
fig|6666666.148656.peg.917 CDS NC_015571.1 1029231 1028929 -3 - 303 FIG00936566: hypothetical protein - none -
fig|6666666.148656.peg.918 CDS NC_015571.1 1029546 1029268 -3 - 279 FIG00938698: hypothetical protein - none -
fig|6666666.148656.peg.919 CDS NC_015571.1 1029768 1030121 3 + 354 FIG00936922: hypothetical protein - none -
fig|6666666.148656.peg.920 CDS NC_015571.1 1030105 1030422 1 + 318 FIG00938987: hypothetical protein - none -
fig|6666666.148656.peg.921 CDS NC_015571.1 1036019 1030527 -2 - 5493 putative DNA methylase - none -
fig|6666666.148656.peg.922 CDS NC_015571.1 1036437 1036006 -3 - 432 hypothetical protein - none -
fig|6666666.148656.peg.923 CDS NC_015571.1 1038841 1036712 -1 - 2130 DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2) DNA topoisomerases, Type I, ATP-independent
fig|6666666.148656.peg.924 CDS NC_015571.1 1040270 1038876 -2 - 1395 FIG00936597: hypothetical protein - none -
fig|6666666.148656.peg.925 CDS NC_015571.1 1040523 1041101 3 + 579 Transcriptional regulator, TetR family - none -
fig|6666666.148656.peg.926 CDS NC_015571.1 1041114 1042271 3 + 1158 Biotin synthesis protein BioZ Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148656.peg.927 CDS NC_015571.1 1042742 1044076 2 + 1335 Arylsulfatase regulator (Fe-S oxidoreductase) - none -
fig|6666666.148656.peg.928 CDS NC_015571.1 1044073 1046358 1 + 2286 TonB-dependent receptor, putative - none -
fig|6666666.148656.peg.929 CDS NC_015571.1 1046968 1048698 1 + 1731 ABC transporter ATP-binding protein - none -
fig|6666666.148656.peg.930 CDS NC_015571.1 1048909 1048781 -1 - 129 hypothetical protein - none -
fig|6666666.148656.peg.931 CDS NC_015571.1 1049485 1049844 1 + 360 tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.148656.peg.932 CDS NC_015571.1 1050104 1049901 -2 - 204 hypothetical protein - none -
fig|6666666.148656.peg.933 CDS NC_015571.1 1052422 1050410 -1 - 2013 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.934 CDS NC_015571.1 1053667 1052438 -1 - 1230 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.935 CDS NC_015571.1 1054050 1053652 -3 - 399 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.936 CDS NC_015571.1 1054084 1054212 1 + 129 hypothetical protein - none -
fig|6666666.148656.peg.937 CDS NC_015571.1 1054860 1055642 3 + 783 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.938 CDS NC_015571.1 1055626 1056054 1 + 429 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.939 CDS NC_015571.1 1056361 1056122 -1 - 240 hypothetical protein - none -
fig|6666666.148656.peg.940 CDS NC_015571.1 1056430 1057023 1 + 594 FIG00936139: hypothetical protein - none -
fig|6666666.148656.peg.941 CDS NC_015571.1 1057053 1057793 3 + 741 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.942 CDS NC_015571.1 1057781 1058368 2 + 588 Conjugative transposon protein TraD Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.943 CDS NC_015571.1 1058544 1058843 3 + 300 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.944 CDS NC_015571.1 1058848 1059225 1 + 378 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.945 CDS NC_015571.1 1059222 1061708 3 + 2487 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.946 CDS NC_015571.1 1061760 1062371 3 + 612 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.947 CDS NC_015571.1 1062374 1063465 2 + 1092 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.948 CDS NC_015571.1 1063472 1064095 2 + 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.949 CDS NC_015571.1 1064200 1064424 1 + 225 Conjugative transposon protein TraL Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.950 CDS NC_015571.1 1064375 1065736 2 + 1362 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.951 CDS NC_015571.1 1065775 1066695 1 + 921 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.952 CDS NC_015571.1 1066697 1067281 2 + 585 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.953 CDS NC_015571.1 1067281 1068126 1 + 846 Conjugative transposon primase TraP @ DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Conjugative transposon, Bacteroidales;
Macromolecular synthesis operon
fig|6666666.148656.peg.954 CDS NC_015571.1 1068154 1068615 1 + 462 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.955 CDS NC_015571.1 1068647 1069114 2 + 468 lysozyme-related protein - none -
fig|6666666.148656.peg.956 CDS NC_015571.1 1069501 1069617 1 + 117 hypothetical protein - none -
fig|6666666.148656.peg.957 CDS NC_015571.1 1070196 1069966 -3 - 231 FIG00935811: hypothetical protein - none -
fig|6666666.148656.peg.958 CDS NC_015571.1 1071486 1070212 -3 - 1275 FIG00937820: hypothetical protein - none -
fig|6666666.148656.peg.959 CDS NC_015571.1 1072034 1071504 -2 - 531 Antirestriction protein ArdA - none -
fig|6666666.148656.peg.960 CDS NC_015571.1 1072466 1072053 -2 - 414 FIG00937340: hypothetical protein - none -
fig|6666666.148656.peg.961 CDS NC_015571.1 1072945 1072484 -1 - 462 hypothetical protein - none -
fig|6666666.148656.peg.962 CDS NC_015571.1 1073377 1073087 -1 - 291 FIG00935685: hypothetical protein - none -
fig|6666666.148656.peg.963 CDS NC_015571.1 1073529 1073380 -3 - 150 hypothetical protein - none -
fig|6666666.148656.peg.964 CDS NC_015571.1 1073794 1073489 -1 - 306 hypothetical protein - none -
fig|6666666.148656.peg.965 CDS NC_015571.1 1075378 1074533 -1 - 846 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.148656.peg.966 CDS NC_015571.1 1076721 1075621 -3 - 1101 hypothetical protein - none -
fig|6666666.148656.peg.967 CDS NC_015571.1 1078069 1077251 -1 - 819 hypothetical protein - none -
fig|6666666.148656.peg.968 CDS NC_015571.1 1078250 1078116 -2 - 135 hypothetical protein - none -
fig|6666666.148656.peg.969 CDS NC_015571.1 1078824 1078243 -3 - 582 hypothetical protein - none -
fig|6666666.148656.peg.970 CDS NC_015571.1 1079717 1079848 2 + 132 FIG00935522: hypothetical protein - none -
fig|6666666.148656.peg.971 CDS NC_015571.1 1081012 1081713 1 + 702 hypothetical protein - none -
fig|6666666.148656.peg.972 CDS NC_015571.1 1081726 1083042 1 + 1317 hypothetical protein - none -
fig|6666666.148656.peg.973 CDS NC_015571.1 1083042 1084337 3 + 1296 S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase - none -
fig|6666666.148656.peg.974 CDS NC_015571.1 1084849 1084992 1 + 144 hypothetical protein - none -
fig|6666666.148656.peg.975 CDS NC_015571.1 1085249 1086568 2 + 1320 Cobyrinic acid A,C-diamide synthase Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.976 CDS NC_015571.1 1086591 1087157 3 + 567 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) - none -
fig|6666666.148656.peg.977 CDS NC_015571.1 1087154 1088650 2 + 1497 Cobyric acid synthase (EC 6.3.5.10) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.978 CDS NC_015571.1 1088643 1089650 3 + 1008 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.979 CDS NC_015571.1 1089625 1090674 1 + 1050 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.980 CDS NC_015571.1 1091330 1091455 2 + 126 hypothetical protein - none -
fig|6666666.148656.peg.981 CDS NC_015571.1 1091508 1091726 3 + 219 hypothetical protein - none -
fig|6666666.148656.peg.982 CDS NC_015571.1 1091886 1092974 3 + 1089 putative glycosyltransferase - none -
fig|6666666.148656.peg.983 CDS NC_015571.1 1093355 1094503 2 + 1149 Hypothetical oxidoreductase YqhD (EC 1.1.-.-) - none -
fig|6666666.148656.peg.984 CDS NC_015571.1 1094670 1095059 3 + 390 hypothetical protein - none -
fig|6666666.148656.peg.985 CDS NC_015571.1 1095220 1095825 1 + 606 hypothetical protein - none -
fig|6666666.148656.peg.986 CDS NC_015571.1 1096012 1095860 -1 - 153 hypothetical protein - none -
fig|6666666.148656.peg.987 CDS NC_015571.1 1096074 1096964 3 + 891 ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.148656.peg.988 CDS NC_015571.1 1096948 1097400 1 + 453 FIG00936131: hypothetical protein - none -
fig|6666666.148656.peg.989 CDS NC_015571.1 1097783 1097652 -2 - 132 hypothetical protein - none -
fig|6666666.148656.peg.990 CDS NC_015571.1 1098038 1099864 2 + 1827 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.148656.peg.991 CDS NC_015571.1 1100144 1101103 2 + 960 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.148656.peg.992 CDS NC_015571.1 1101134 1101271 2 + 138 hypothetical protein - none -
fig|6666666.148656.peg.993 CDS NC_015571.1 1101147 1102715 3 + 1569 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.148656.peg.994 CDS NC_015571.1 1102731 1103774 3 + 1044 capsular polysaccharide biosynthesis protein Rhamnose containing glycans
fig|6666666.148656.peg.995 CDS NC_015571.1 1104153 1105304 3 + 1152 glycosyl transferase, group 1 family protein - none -
fig|6666666.148656.peg.996 CDS NC_015571.1 1105301 1106170 2 + 870 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster - none -
fig|6666666.148656.peg.997 CDS NC_015571.1 1106290 1107417 1 + 1128 FIG00935582: hypothetical protein - none -
fig|6666666.148656.peg.998 CDS NC_015571.1 1107627 1108751 3 + 1125 pigmentation and extracellular proteinase regulator - none -
fig|6666666.148656.peg.999 CDS NC_015571.1 1108748 1110055 2 + 1308 O-antigen flippase Wzx KDO2-Lipid A biosynthesis
fig|6666666.148656.peg.1000 CDS NC_015571.1 1110018 1111646 3 + 1629 predicted protein - none -
fig|6666666.148656.peg.1001 CDS NC_015571.1 1112435 1111821 -2 - 615 bacterial sugar transferase - none -
fig|6666666.148656.peg.1002 CDS NC_015571.1 1113941 1113000 -2 - 942 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.148656.peg.1003 CDS NC_015571.1 1114720 1114268 -1 - 453 FIG00935954: hypothetical protein - none -
fig|6666666.148656.peg.1004 CDS NC_015571.1 1117379 1114749 -2 - 2631 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.148656.peg.1005 CDS NC_015571.1 1117404 1117583 3 + 180 hypothetical protein - none -
fig|6666666.148656.peg.1006 CDS NC_015571.1 1118164 1118030 -1 - 135 hypothetical protein - none -
fig|6666666.148656.peg.1007 CDS NC_015571.1 1120413 1118239 -3 - 2175 FIG00936306: hypothetical protein - none -
fig|6666666.148656.peg.1008 CDS NC_015571.1 1123164 1120612 -3 - 2553 Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.148656.peg.1009 CDS NC_015571.1 1124821 1123439 -1 - 1383 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.148656.peg.1010 CDS NC_015571.1 1125335 1124868 -2 - 468 Transcriptional regulator, AsnC family - none -
fig|6666666.148656.peg.1011 CDS NC_015571.1 1125675 1126862 3 + 1188 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.148656.peg.1012 CDS NC_015571.1 1126887 1127537 3 + 651 FIG00936419: hypothetical protein - none -
fig|6666666.148656.peg.1013 CDS NC_015571.1 1127560 1128123 1 + 564 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) - none -
fig|6666666.148656.peg.1014 CDS NC_015571.1 1128258 1129601 3 + 1344 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.148656.peg.1015 CDS NC_015571.1 1129702 1131021 1 + 1320 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.148656.peg.1016 CDS NC_015571.1 1131053 1132462 2 + 1410 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.148656.peg.1017 CDS NC_015571.1 1133303 1132743 -2 - 561 Flavodoxin Flavodoxin
fig|6666666.148656.peg.1018 CDS NC_015571.1 1133522 1136113 2 + 2592 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.148656.peg.1019 CDS NC_015571.1 1138239 1136893 -3 - 1347 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog Multidrug Resistance Efflux Pumps
fig|6666666.148656.peg.1020 CDS NC_015571.1 1139423 1138533 -2 - 891 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines
fig|6666666.148656.peg.1021 CDS NC_015571.1 1140881 1139544 -2 - 1338 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.148656.peg.1022 CDS NC_015571.1 1141326 1140958 -3 - 369 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.148656.peg.1023 CDS NC_015571.1 1141419 1142828 3 + 1410 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.148656.peg.1024 CDS NC_015571.1 1142822 1144279 2 + 1458 RNA polymerase sigma-54 factor RpoN Transcription initiation, bacterial sigma factors
fig|6666666.148656.peg.1025 CDS NC_015571.1 1145010 1144243 -3 - 768 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.148656.peg.1026 CDS NC_015571.1 1146325 1145036 -1 - 1290 ATPase, AAA family - none -
fig|6666666.148656.peg.1027 CDS NC_015571.1 1146882 1146424 -3 - 459 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.1028 CDS NC_015571.1 1147231 1148691 1 + 1461 sodium/iodide co-transporter - none -
fig|6666666.148656.peg.1029 CDS NC_015571.1 1148688 1149539 3 + 852 FIG00935814: hypothetical protein - none -
fig|6666666.148656.peg.1030 CDS NC_015571.1 1149532 1150356 1 + 825 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.148656.peg.1031 CDS NC_015571.1 1150693 1151916 1 + 1224 FIG00936368: hypothetical protein - none -
fig|6666666.148656.peg.1032 CDS NC_015571.1 1154695 1152224 -1 - 2472 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) / Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
Pyruvate Alanine Serine Interconversions
fig|6666666.148656.peg.1033 CDS NC_015571.1 1155837 1154731 -3 - 1107 FIG00936670: hypothetical protein - none -
fig|6666666.148656.peg.1034 CDS NC_015571.1 1156523 1155975 -2 - 549 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.1035 CDS NC_015571.1 1158176 1156740 -2 - 1437 RNA methyltransferase, TrmA family - none -
fig|6666666.148656.peg.1036 CDS NC_015571.1 1159609 1158221 -1 - 1389 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucosamine mutase (EC 5.4.2.10) Bacterial checkpoint-control-related cluster;
Mannose Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.148656.peg.1037 CDS NC_015571.1 1160259 1159663 -3 - 597 FIG00936234: hypothetical protein - none -
fig|6666666.148656.peg.1038 CDS NC_015571.1 1161345 1160350 -3 - 996 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.148656.peg.1039 CDS NC_015571.1 1161583 1161347 -1 - 237 hypothetical protein - none -
fig|6666666.148656.peg.1040 CDS NC_015571.1 1162152 1162889 3 + 738 Transcriptional regulatory protein rprY - none -
fig|6666666.148656.peg.1041 CDS NC_015571.1 1163006 1163569 2 + 564 acetyltransferase, GNAT family - none -
fig|6666666.148656.peg.1042 CDS NC_015571.1 1164556 1163621 -1 - 936 COG1242: Predicted Fe-S oxidoreductase - none -
fig|6666666.148656.peg.1043 CDS NC_015571.1 1164721 1164584 -1 - 138 hypothetical protein - none -
fig|6666666.148656.peg.1044 CDS NC_015571.1 1164791 1164913 2 + 123 hypothetical protein - none -
fig|6666666.148656.peg.1045 CDS NC_015571.1 1165158 1164910 -3 - 249 hypothetical protein - none -
fig|6666666.148656.peg.1046 CDS NC_015571.1 1165425 1166528 3 + 1104 thioredoxin family protein - none -
fig|6666666.148656.peg.1047 CDS NC_015571.1 1166531 1167523 2 + 993 FIG00936374: hypothetical protein - none -
fig|6666666.148656.peg.1048 CDS NC_015571.1 1167544 1167660 1 + 117 Phosphate acetyltransferase (EC 2.3.1.8) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.148656.peg.1049 CDS NC_015571.1 1167733 1168743 1 + 1011 Phosphate acetyltransferase (EC 2.3.1.8) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.148656.peg.1050 CDS NC_015571.1 1168789 1169988 1 + 1200 Acetate kinase (EC 2.7.2.1) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.148656.peg.1051 CDS NC_015571.1 1171003 1170158 -1 - 846 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Lysine fermentation;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.148656.peg.1052 CDS NC_015571.1 1171820 1171050 -2 - 771 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) Acetyl-CoA fermentation to Butyrate;
Lysine fermentation;
Polyhydroxybutyrate metabolism
fig|6666666.148656.peg.1053 CDS NC_015571.1 1172931 1171924 -3 - 1008 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate;
Lysine fermentation
fig|6666666.148656.peg.1054 CDS NC_015571.1 1173730 1172945 -1 - 786 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate;
Lysine fermentation
fig|6666666.148656.peg.1055 CDS NC_015571.1 1174842 1173745 -3 - 1098 Butyryl-CoA dehydrogenase (EC 1.3.8.1) 5-FCL-like protein;
Acetyl-CoA fermentation to Butyrate;
Anaerobic respiratory reductases;
Lysine fermentation
fig|6666666.148656.peg.1056 CDS NC_015571.1 1175592 1174930 -3 - 663 Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) Acetyl-CoA fermentation to Butyrate;
Lysine fermentation;
Polyhydroxybutyrate metabolism
fig|6666666.148656.peg.1057 CDS NC_015571.1 1176406 1175615 -1 - 792 L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3) Lysine degradation;
Lysine fermentation
fig|6666666.148656.peg.1058 CDS NC_015571.1 1177974 1176403 -3 - 1572 L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3) Lysine degradation;
Lysine fermentation
fig|6666666.148656.peg.1059 CDS NC_015571.1 1179302 1178004 -2 - 1299 MutS domain protein, family 2 DNA repair, bacterial MutL-MutS system
fig|6666666.148656.peg.1060 CDS NC_015571.1 1180492 1179395 -1 - 1098 hypothetical protein clustered with lysine fermentation genes - none -
fig|6666666.148656.peg.1061 CDS NC_015571.1 1181743 1180493 -1 - 1251 Lysine 2,3-aminomutase (EC 5.4.3.2) Lysine degradation;
Lysine fermentation
fig|6666666.148656.peg.1062 CDS NC_015571.1 1182873 1181830 -3 - 1044 3,5-diaminohexanoate dehydrogenase (EC 1.4.1.11) Lysine fermentation
fig|6666666.148656.peg.1063 CDS NC_015571.1 1183736 1182915 -2 - 822 3-keto-5-aminohexanoate cleavage enzyme Lysine fermentation
fig|6666666.148656.peg.1064 CDS NC_015571.1 1184071 1183763 -1 - 309 3-aminobutyryl-CoA ammonia-lyase (EC 4.3.1.14) Lysine fermentation
fig|6666666.148656.peg.1065 CDS NC_015571.1 1184790 1184206 -3 - 585 Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) Acetyl-CoA fermentation to Butyrate;
Lysine fermentation;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.148656.peg.1066 CDS NC_015571.1 1185990 1185121 -3 - 870 Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.148656.peg.1067 CDS NC_015571.1 1186823 1186026 -2 - 798 Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.148656.peg.1068 CDS NC_015571.1 1187315 1186875 -2 - 441 transcriptional regulator, putative - none -
fig|6666666.148656.peg.1069 CDS NC_015571.1 1188373 1188525 1 + 153 hypothetical protein - none -
fig|6666666.148656.peg.1070 CDS NC_015571.1 1188889 1189848 1 + 960 ISPg6, transposase - none -
fig|6666666.148656.peg.1071 CDS NC_015571.1 1189921 1190043 1 + 123 IS1478 transposase - none -
fig|6666666.148656.peg.1072 CDS NC_015571.1 1191870 1190161 -3 - 1710 Putative carboxy-terminal processing protease (EC 3.4.21.102) - none -
fig|6666666.148656.peg.1073 CDS NC_015571.1 1192234 1192034 -1 - 201 FIG00936236: hypothetical protein - none -
fig|6666666.148656.peg.1074 CDS NC_015571.1 1192346 1192501 2 + 156 Mobile element protein - none -
fig|6666666.148656.peg.1075 CDS NC_015571.1 1194377 1192671 -2 - 1707 ABC transporter, ATP-binding protein, putative - none -
fig|6666666.148656.peg.1076 CDS NC_015571.1 1196178 1194424 -3 - 1755 ABC transporter ATP-binding protein - none -
fig|6666666.148656.peg.1077 CDS NC_015571.1 1197495 1196218 -3 - 1278 FIG00936125: hypothetical protein - none -
fig|6666666.148656.peg.1078 CDS NC_015571.1 1198290 1197499 -3 - 792 FIG00935715: hypothetical protein - none -
fig|6666666.148656.peg.1079 CDS NC_015571.1 1200774 1198369 -3 - 2406 Predicted exporter of the RND superfamily - none -
fig|6666666.148656.peg.1080 CDS NC_015571.1 1201414 1200815 -1 - 600 Transcriptional regulator, TetR family - none -
fig|6666666.148656.peg.1081 CDS NC_015571.1 1204046 1202511 -2 - 1536 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) - none -
fig|6666666.148656.peg.1082 CDS NC_015571.1 1204874 1204068 -2 - 807 FIG00936316: hypothetical protein - none -
fig|6666666.148656.peg.1083 CDS NC_015571.1 1206270 1204879 -3 - 1392 FIG00936287: hypothetical protein - none -
fig|6666666.148656.peg.1084 CDS NC_015571.1 1206965 1206717 -2 - 249 Mobile element protein - none -
fig|6666666.148656.peg.1085 CDS NC_015571.1 1207193 1209073 2 + 1881 ATPase involved in DNA repair - none -
fig|6666666.148656.peg.1086 CDS NC_015571.1 1209313 1210266 1 + 954 glycerate dehydrogenase - none -
fig|6666666.148656.peg.1087 CDS NC_015571.1 1210652 1211800 2 + 1149 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148656.peg.1088 CDS NC_015571.1 1211800 1212219 1 + 420 hypothetical protein - none -
fig|6666666.148656.peg.1089 CDS NC_015571.1 1212400 1212648 1 + 249 hypothetical protein - none -
fig|6666666.148656.peg.1090 CDS NC_015571.1 1215793 1213472 -1 - 2322 hypothetical protein - none -
fig|6666666.148656.peg.1091 CDS NC_015571.1 1216874 1215981 -2 - 894 Filamentation induced by cAMP protein Fic - none -
fig|6666666.148656.peg.1092 CDS NC_015571.1 1217080 1216886 -1 - 195 transcriptional regulator, putative - none -
fig|6666666.148656.peg.1093 CDS NC_015571.1 1217661 1218107 3 + 447 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.1094 CDS NC_015571.1 1218315 1218193 -3 - 123 hypothetical protein - none -
fig|6666666.148656.peg.1095 CDS NC_015571.1 1220549 1218627 -2 - 1923 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.148656.peg.1096 CDS NC_015571.1 1221116 1222663 2 + 1548 Ribosylnicotinamide kinase (EC 2.7.1.22) homolog / Unknown conserved in Flavobacteria - none -
fig|6666666.148656.peg.1097 CDS NC_015571.1 1222712 1224499 2 + 1788 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.148656.peg.1098 CDS NC_015571.1 1224601 1225047 1 + 447 carbonic anhydrase, family 3 - none -
fig|6666666.148656.peg.1099 CDS NC_015571.1 1225195 1226073 1 + 879 TPR domain protein - none -
fig|6666666.148656.peg.1100 CDS NC_015571.1 1226101 1226751 1 + 651 Ribonuclease HI-related protein 3 Ribonuclease H
fig|6666666.148656.peg.1101 CDS NC_015571.1 1226766 1227938 3 + 1173 FIG00935887: hypothetical protein - none -
fig|6666666.148656.peg.1102 CDS NC_015571.1 1228298 1229110 2 + 813 lipoprotein protein, putative - none -
fig|6666666.148656.peg.1103 CDS NC_015571.1 1229252 1229584 2 + 333 FIG00936941: hypothetical protein - none -
fig|6666666.148656.peg.1104 CDS NC_015571.1 1229614 1230072 1 + 459 FIG00897728: hypothetical protein - none -
fig|6666666.148656.peg.1105 CDS NC_015571.1 1230348 1230659 3 + 312 hypothetical protein - none -
fig|6666666.148656.peg.1106 CDS NC_015571.1 1230663 1231796 3 + 1134 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.148656.peg.1107 CDS NC_015571.1 1231806 1232531 3 + 726 Oxidoreductase, short chain dehydrogenase/reductase family - none -
fig|6666666.148656.peg.1108 CDS NC_015571.1 1233533 1233411 -2 - 123 FIG00936693: hypothetical protein - none -
fig|6666666.148656.peg.1109 CDS NC_015571.1 1233544 1235037 1 + 1494 transglycosylase - none -
fig|6666666.148656.peg.1110 CDS NC_015571.1 1235063 1236934 2 + 1872 COG0488: ATPase components of ABC transporters with duplicated ATPase domains - none -
fig|6666666.148656.peg.1111 CDS NC_015571.1 1236942 1237646 3 + 705 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.148656.peg.1112 CDS NC_015571.1 1237979 1237791 -2 - 189 FIG00936565: hypothetical protein - none -
fig|6666666.148656.peg.1113 CDS NC_015571.1 1240357 1238249 -1 - 2109 hypothetical protein - none -
fig|6666666.148656.peg.1114 CDS NC_015571.1 1241877 1240564 -3 - 1314 NAD-specific glutamate dehydrogenase (EC 1.4.1.2) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.148656.peg.1115 CDS NC_015571.1 1242453 1242581 3 + 129 hypothetical protein - none -
fig|6666666.148656.peg.1116 CDS NC_015571.1 1243547 1242591 -2 - 957 L-threonine 3-dehydrogenase (EC 1.1.1.103) Glycine Biosynthesis;
Threonine degradation
fig|6666666.148656.peg.1117 CDS NC_015571.1 1243861 1244571 1 + 711 FIG00936194: hypothetical protein - none -
fig|6666666.148656.peg.1118 CDS NC_015571.1 1244568 1245167 3 + 600 transcriptional regulator, LuxR family - none -
fig|6666666.148656.peg.1119 CDS NC_015571.1 1245868 1245185 -1 - 684 Similar to tRNA pseudouridine synthase C, group TruC1 RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.148656.peg.1120 CDS NC_015571.1 1246658 1245912 -2 - 747 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.148656.peg.1121 CDS NC_015571.1 1247377 1246742 -1 - 636 Transcriptional regulator, TetR family - none -
fig|6666666.148656.peg.1122 CDS NC_015571.1 1247956 1249743 1 + 1788 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.148656.peg.1123 CDS NC_015571.1 1249778 1251364 2 + 1587 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.148656.peg.1124 CDS NC_015571.1 1251878 1252963 2 + 1086 Mobile element protein - none -
fig|6666666.148656.peg.1125 CDS NC_015571.1 1253902 1253756 -1 - 147 hypothetical protein - none -
fig|6666666.148656.peg.1126 CDS NC_015571.1 1254132 1256774 3 + 2643 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.148656.peg.1127 CDS NC_015571.1 1256789 1257850 2 + 1062 3-dehydroquinate synthase (EC 4.2.3.4) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.148656.peg.1128 CDS NC_015571.1 1258827 1258096 -3 - 732 probable DNA alkylation repair enzyme - none -
fig|6666666.148656.peg.1129 CDS NC_015571.1 1259456 1258842 -2 - 615 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) - none -
fig|6666666.148656.peg.1130 CDS NC_015571.1 1260153 1259479 -3 - 675 FIG00936236: hypothetical protein - none -
fig|6666666.148656.peg.1131 CDS NC_015571.1 1260136 1260411 1 + 276 Mobile element protein - none -
fig|6666666.148656.peg.1132 CDS NC_015571.1 1261957 1260722 -1 - 1236 FIG00935867: hypothetical protein - none -
fig|6666666.148656.peg.1133 CDS NC_015571.1 1263979 1261970 -1 - 2010 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.148656.peg.1134 CDS NC_015571.1 1264494 1263967 -3 - 528 acetyltransferase, GNAT family - none -
fig|6666666.148656.peg.1135 CDS NC_015571.1 1265124 1264501 -3 - 624 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.148656.peg.1136 CDS NC_015571.1 1266635 1265121 -2 - 1515 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.148656.peg.1137 CDS NC_015571.1 1267151 1266957 -2 - 195 Integration host factor alpha/beta DNA structural proteins, bacterial
fig|6666666.148656.peg.1138 CDS NC_015571.1 1267673 1267347 -2 - 327 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.148656.peg.1139 CDS NC_015571.1 1270267 1267871 -1 - 2397 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.148656.peg.1140 CDS NC_015571.1 1271798 1270665 -2 - 1134 Mobile element protein - none -
fig|6666666.148656.peg.1141 CDS NC_015571.1 1272912 1272010 -3 - 903 Mobile element protein - none -
fig|6666666.148656.peg.1142 CDS NC_015571.1 1277452 1277291 -1 - 162 hypothetical protein - none -
fig|6666666.148656.peg.1143 CDS NC_015571.1 1279377 1279075 -3 - 303 hypothetical protein - none -
fig|6666666.148656.peg.1144 CDS NC_015571.1 1279376 1279702 2 + 327 hypothetical protein - none -
fig|6666666.148656.peg.1145 CDS NC_015571.1 1280136 1279771 -3 - 366 FIG00936319: hypothetical protein - none -
fig|6666666.148656.peg.1146 CDS NC_015571.1 1281245 1280214 -2 - 1032 FIG00935838: hypothetical protein - none -
fig|6666666.148656.peg.1147 CDS NC_015571.1 1281222 1281443 3 + 222 hypothetical protein - none -
fig|6666666.148656.peg.1148 CDS NC_015571.1 1281851 1283206 2 + 1356 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148656.peg.1149 CDS NC_015571.1 1283408 1284436 2 + 1029 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148656.peg.1150 CDS NC_015571.1 1284460 1285194 1 + 735 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148656.peg.1151 CDS NC_015571.1 1285200 1285829 3 + 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148656.peg.1152 CDS NC_015571.1 1285869 1286483 3 + 615 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148656.peg.1153 CDS NC_015571.1 1286502 1287740 3 + 1239 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148656.peg.1154 CDS NC_015571.1 1288671 1289153 3 + 483 FIG00936159: hypothetical protein - none -
fig|6666666.148656.peg.1155 CDS NC_015571.1 1289212 1290957 1 + 1746 FIG00936390: hypothetical protein - none -
fig|6666666.148656.peg.1156 CDS NC_015571.1 1290977 1291849 2 + 873 outer membrane lipoprotein Omp28 - none -
fig|6666666.148656.peg.1157 CDS NC_015571.1 1291849 1292595 1 + 747 FIG00936543: hypothetical protein - none -
fig|6666666.148656.peg.1158 CDS NC_015571.1 1292814 1293773 3 + 960 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.148656.peg.1159 CDS NC_015571.1 1293812 1294387 2 + 576 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.148656.peg.1160 CDS NC_015571.1 1294363 1295100 1 + 738 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.148656.peg.1161 CDS NC_015571.1 1295374 1295643 1 + 270 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.1162 CDS NC_015571.1 1296020 1296613 2 + 594 hypothetical protein - none -
fig|6666666.148656.peg.1163 CDS NC_015571.1 1296628 1298097 1 + 1470 FIG00935587: hypothetical protein - none -
fig|6666666.148656.peg.1164 CDS NC_015571.1 1298354 1298232 -2 - 123 hypothetical protein - none -
fig|6666666.148656.peg.1165 CDS NC_015571.1 1298557 1300104 1 + 1548 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.148656.peg.1166 CDS NC_015571.1 1300101 1300658 3 + 558 peptidyl-prolyl cis-trans isomerase, FKBP-type - none -
fig|6666666.148656.peg.1167 CDS NC_015571.1 1300655 1301425 2 + 771 5-nucleotidase SurE (EC 3.1.3.5) Housecleaning nucleoside triphosphate pyrophosphatases;
Stationary phase repair cluster
fig|6666666.148656.peg.1168 CDS NC_015571.1 1301462 1302613 2 + 1152 Lipid-A-disaccharide synthase (EC 2.4.1.182) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.148656.peg.1169 CDS NC_015571.1 1302610 1303509 1 + 900 Transcriptional regulator, AraC family - none -
fig|6666666.148656.peg.1170 CDS NC_015571.1 1305761 1304364 -2 - 1398 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.148656.peg.1171 CDS NC_015571.1 1306190 1305765 -2 - 426 Sulfur acceptor protein SufE for iron-sulfur cluster assembly Iron-sulfur cluster assembly
fig|6666666.148656.peg.1172 CDS NC_015571.1 1307215 1306214 -1 - 1002 leucine aminopeptidase precursor - none -
fig|6666666.148656.peg.1173 CDS NC_015571.1 1307563 1308309 1 + 747 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.148656.peg.1174 CDS NC_015571.1 1308346 1309245 1 + 900 FIG00936165: hypothetical protein - none -
fig|6666666.148656.peg.1175 CDS NC_015571.1 1309272 1309457 3 + 186 FIG00935778: hypothetical protein - none -
fig|6666666.148656.peg.1176 CDS NC_015571.1 1310932 1312437 1 + 1506 FIG00936147: hypothetical protein - none -
fig|6666666.148656.peg.1177 CDS NC_015571.1 1312497 1313168 3 + 672 FIG00935770: hypothetical protein - none -
fig|6666666.148656.peg.1178 CDS NC_015571.1 1313331 1314668 3 + 1338 Xanthine permease Purine Utilization;
Xanthine Metabolism in Bacteria
fig|6666666.148656.peg.1179 CDS NC_015571.1 1314729 1315286 3 + 558 Xanthine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions;
Xanthine Metabolism in Bacteria
fig|6666666.148656.peg.1180 CDS NC_015571.1 1316171 1315485 -2 - 687 putative peptidase - none -
fig|6666666.148656.peg.1181 CDS NC_015571.1 1316844 1316197 -3 - 648 Polysaccharide deacetylase - none -
fig|6666666.148656.peg.1182 CDS NC_015571.1 1320144 1316845 -3 - 3300 membrane protein, putative - none -
fig|6666666.148656.peg.1183 CDS NC_015571.1 1321508 1320195 -2 - 1314 GTP-binding protein EngA Universal GTPases
fig|6666666.148656.peg.1184 CDS NC_015571.1 1322475 1321576 -3 - 900 GTP-binding protein Era Bacterial Cell Division;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.148656.peg.1185 CDS NC_015571.1 1323561 1322554 -3 - 1008 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.148656.peg.1186 CDS NC_015571.1 1323857 1323741 -2 - 117 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.148656.peg.1187 CDS NC_015571.1 1324484 1323933 -2 - 552 COG1399 protein in cluster with ribosomal protein L32p, Bacteroidetes/Chlorobi subfamily - none -
fig|6666666.148656.peg.1188 CDS NC_015571.1 1324450 1324605 1 + 156 hypothetical protein - none -
fig|6666666.148656.peg.1189 CDS NC_015571.1 1324982 1324728 -2 - 255 hypothetical protein - none -
fig|6666666.148656.peg.1190 CDS NC_015571.1 1326669 1325017 -3 - 1653 FIG00936358: hypothetical protein - none -
fig|6666666.148656.peg.1191 CDS NC_015571.1 1328669 1326666 -2 - 2004 FIG00935539: hypothetical protein - none -
fig|6666666.148656.peg.1192 CDS NC_015571.1 1330057 1328684 -1 - 1374 lipoprotein, putative - none -
fig|6666666.148656.peg.1193 CDS NC_015571.1 1330982 1330071 -2 - 912 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148656.peg.1194 CDS NC_015571.1 1332290 1331121 -2 - 1170 similar to GB:M15518, GB:D01096, GB:A01465, GB:A04051, GB:A07197, GB:V00570, GB:K03021, GB:L00153, GB:L00141, GB:L00142, GB:L00143, GB:L00144, GB:L00145, GB:L00146, GB:L00147, GB:L00148, GB:L00149, GB:L00150, GB:L00151, GB:L00152, GB:S77144, SP:P00750, PID:190032, PID:2285954, PID:339818, PID:339834, PID:339839, PID:340177, PID:345129, PID:37244, PID:412165, PID:441174, and PID:575655; identified by sequence similarity; putative - none -
fig|6666666.148656.peg.1195 CDS NC_015571.1 1333818 1332346 -3 - 1473 60 kDa protein - none -
fig|6666666.148656.peg.1196 CDS NC_015571.1 1334425 1333844 -1 - 582 FIG00936405: hypothetical protein - none -
fig|6666666.148656.peg.1197 CDS NC_015571.1 1334975 1335418 2 + 444 hypothetical protein - none -
fig|6666666.148656.peg.1198 CDS NC_015571.1 1335415 1336089 1 + 675 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC - none -
fig|6666666.148656.peg.1199 CDS NC_015571.1 1336098 1336229 3 + 132 hypothetical protein - none -
fig|6666666.148656.peg.1200 CDS NC_015571.1 1336210 1337148 1 + 939 transcriptional regulator, AraC family - none -
fig|6666666.148656.peg.1201 CDS NC_015571.1 1338298 1337288 -1 - 1011 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.148656.peg.1202 CDS NC_015571.1 1338506 1338309 -2 - 198 hypothetical protein - none -
fig|6666666.148656.peg.1203 CDS NC_015571.1 1338599 1338886 2 + 288 Mobile element protein - none -
fig|6666666.148656.peg.1204 CDS NC_015571.1 1338964 1339977 1 + 1014 L-asparaginase I, cytoplasmic (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.148656.peg.1205 CDS NC_015571.1 1340030 1340839 2 + 810 metallo-beta-lactamase family protein - none -
fig|6666666.148656.peg.1206 CDS NC_015571.1 1341927 1340956 -3 - 972 oxidoreductase, Gfo/Idh/MocA family - none -
fig|6666666.148656.peg.1207 CDS NC_015571.1 1342712 1343290 2 + 579 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.148656.peg.1208 CDS NC_015571.1 1343570 1343442 -2 - 129 hypothetical protein - none -
fig|6666666.148656.peg.1209 CDS NC_015571.1 1343804 1343661 -2 - 144 hypothetical protein - none -
fig|6666666.148656.peg.1210 CDS NC_015571.1 1344295 1344420 1 + 126 hypothetical protein - none -
fig|6666666.148656.peg.1211 CDS NC_015571.1 1344911 1344405 -2 - 507 hypothetical protein - none -
fig|6666666.148656.peg.1212 CDS NC_015571.1 1344963 1345097 3 + 135 hypothetical protein - none -
fig|6666666.148656.peg.1213 CDS NC_015571.1 1345235 1345089 -2 - 147 hypothetical protein - none -
fig|6666666.148656.peg.1214 CDS NC_015571.1 1346427 1345657 -3 - 771 FIG00935635: hypothetical protein - none -
fig|6666666.148656.peg.1215 CDS NC_015571.1 1346795 1346995 2 + 201 Sulfur carrier protein ThiS Thiamin biosynthesis
fig|6666666.148656.peg.1216 CDS NC_015571.1 1347065 1348828 2 + 1764 Thiamin biosynthesis protein ThiC Thiamin biosynthesis
fig|6666666.148656.peg.1217 CDS NC_015571.1 1348825 1350768 1 + 1944 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.148656.peg.1218 CDS NC_015571.1 1350827 1351606 2 + 780 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.148656.peg.1219 CDS NC_015571.1 1351619 1352731 2 + 1113 2-iminoacetate synthase (ThiH) (EC 4.1.99.19) - none -
fig|6666666.148656.peg.1220 CDS NC_015571.1 1353525 1352848 -3 - 678 FIG00935760: hypothetical protein - none -
fig|6666666.148656.peg.1221 CDS NC_015571.1 1354286 1353726 -2 - 561 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148656.peg.1222 CDS NC_015571.1 1354913 1355134 2 + 222 Iron-sulfur cluster assembly ATPase protein SufC Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.148656.peg.1223 CDS NC_015571.1 1355243 1356832 2 + 1590 FIG00936385: hypothetical protein - none -
fig|6666666.148656.peg.1224 CDS NC_015571.1 1357268 1357423 2 + 156 hypothetical protein - none -
fig|6666666.148656.peg.1225 CDS NC_015571.1 1357603 1359225 1 + 1623 FIG00936385: hypothetical protein - none -
fig|6666666.148656.peg.1226 CDS NC_015571.1 1359400 1360374 1 + 975 FIG00935807: hypothetical protein - none -
fig|6666666.148656.peg.1227 CDS NC_015571.1 1360975 1362258 1 + 1284 ATP-dependent RNA helicase - none -
fig|6666666.148656.peg.1228 CDS NC_015571.1 1362445 1363386 1 + 942 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway
fig|6666666.148656.peg.1229 CDS NC_015571.1 1363492 1368282 1 + 4791 FIG00935594: hypothetical protein - none -
fig|6666666.148656.peg.1230 CDS NC_015571.1 1368290 1370617 2 + 2328 FIG00935923: hypothetical protein - none -
fig|6666666.148656.peg.1231 CDS NC_015571.1 1371065 1375585 2 + 4521 FIG00935920: hypothetical protein - none -
fig|6666666.148656.peg.1232 CDS NC_015571.1 1376628 1377686 3 + 1059 FIG00935540: hypothetical protein - none -
fig|6666666.148656.peg.1233 CDS NC_015571.1 1378110 1377757 -3 - 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.148656.peg.1234 CDS NC_015571.1 1378980 1378153 -3 - 828 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.148656.peg.1235 CDS NC_015571.1 1380661 1379477 -1 - 1185 FIG00406664: hypothetical protein - none -
fig|6666666.148656.peg.1236 CDS NC_015571.1 1381776 1380718 -3 - 1059 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase
fig|6666666.148656.peg.1237 CDS NC_015571.1 1382311 1381838 -1 - 474 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.148656.peg.1238 CDS NC_015571.1 1382730 1382311 -3 - 420 hypothetical protein - none -
fig|6666666.148656.peg.1239 CDS NC_015571.1 1383768 1382785 -3 - 984 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.148656.peg.1240 CDS NC_015571.1 1383724 1383837 1 + 114 hypothetical protein - none -
fig|6666666.148656.peg.1241 CDS NC_015571.1 1384726 1384601 -1 - 126 hypothetical protein - none -
fig|6666666.148656.peg.1242 CDS NC_015571.1 1384851 1385942 3 + 1092 FIG00936535: hypothetical protein - none -
fig|6666666.148656.peg.1243 CDS NC_015571.1 1385968 1387500 1 + 1533 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.148656.peg.1244 CDS NC_015571.1 1387681 1388673 1 + 993 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148656.peg.1245 CDS NC_015571.1 1388663 1389964 2 + 1302 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148656.peg.1246 CDS NC_015571.1 1389976 1390452 1 + 477 FIG00935874: hypothetical protein - none -
fig|6666666.148656.peg.1247 CDS NC_015571.1 1390647 1390480 -3 - 168 Mobile element protein - none -
fig|6666666.148656.peg.1248 CDS NC_015571.1 1390833 1391018 3 + 186 ISPg6, transposase - none -
fig|6666666.148656.peg.1249 CDS NC_015571.1 1391363 1391169 -2 - 195 hypothetical protein - none -
fig|6666666.148656.peg.1250 CDS NC_015571.1 1392139 1391339 -1 - 801 Mobile element protein - none -
fig|6666666.148656.peg.1251 CDS NC_015571.1 1394110 1393025 -1 - 1086 Mobile element protein - none -
fig|6666666.148656.peg.1252 CDS NC_015571.1 1394249 1394491 2 + 243 Mobile element protein - none -
fig|6666666.148656.peg.1253 CDS NC_015571.1 1395654 1394770 -3 - 885 FIG00936395: hypothetical protein - none -
fig|6666666.148656.peg.1254 CDS NC_015571.1 1396255 1396419 1 + 165 Mobile element protein - none -
fig|6666666.148656.peg.1255 CDS NC_015571.1 1397437 1396652 -1 - 786 putative polysaccharide deacetylase - none -
fig|6666666.148656.peg.1256 CDS NC_015571.1 1398129 1397434 -3 - 696 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster - none -
fig|6666666.148656.peg.1257 CDS NC_015571.1 1399318 1398131 -1 - 1188 FIG00936205: hypothetical protein - none -
fig|6666666.148656.peg.1258 CDS NC_015571.1 1399989 1399360 -3 - 630 Uridine kinase (EC 2.7.1.48) pyrimidine conversions
fig|6666666.148656.peg.1259 CDS NC_015571.1 1401226 1400039 -1 - 1188 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148656.peg.1260 CDS NC_015571.1 1402064 1401570 -2 - 495 COG2110, Macro domain, possibly ADP-ribose binding module - none -
fig|6666666.148656.peg.1261 CDS NC_015571.1 1402934 1402146 -2 - 789 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.148656.peg.1262 CDS NC_015571.1 1403280 1402963 -3 - 318 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.148656.peg.1263 CDS NC_015571.1 1404517 1403366 -1 - 1152 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.148656.peg.1264 CDS NC_015571.1 1405145 1404561 -2 - 585 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.148656.peg.1265 CDS NC_015571.1 1405492 1408860 1 + 3369 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.148656.peg.1266 CDS NC_015571.1 1410174 1408837 -3 - 1338 PAP2 superfamily protein - none -
fig|6666666.148656.peg.1267 CDS NC_015571.1 1410910 1410236 -1 - 675 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.148656.peg.1268 CDS NC_015571.1 1411951 1410929 -1 - 1023 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.148656.peg.1269 CDS NC_015571.1 1412177 1412028 -2 - 150 hypothetical protein - none -
fig|6666666.148656.peg.1270 CDS NC_015571.1 1412163 1412669 3 + 507 hypothetical protein - none -
fig|6666666.148656.peg.1271 CDS NC_015571.1 1413382 1413059 -1 - 324 FIG00935993: hypothetical protein - none -
fig|6666666.148656.peg.1272 CDS NC_015571.1 1414928 1413387 -2 - 1542 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.148656.peg.1273 CDS NC_015571.1 1415976 1414957 -3 - 1020 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148656.peg.1274 CDS NC_015571.1 1416485 1415991 -2 - 495 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.148656.peg.1275 CDS NC_015571.1 1416741 1416977 3 + 237 Acyl carrier protein Fatty Acid Biosynthesis FASII
fig|6666666.148656.peg.1276 CDS NC_015571.1 1416987 1418243 3 + 1257 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.148656.peg.1277 CDS NC_015571.1 1418327 1419040 2 + 714 Ribonuclease III (EC 3.1.26.3) RNA processing and degradation, bacterial
fig|6666666.148656.peg.1278 CDS NC_015571.1 1422114 1419169 -3 - 2946 Protein-export membrane protein SecD (TC 3.A.5.1.1) / Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832;
CBSS-211586.1.peg.2832
fig|6666666.148656.peg.1279 CDS NC_015571.1 1422778 1422353 -1 - 426 acetyltransferase, GNAT family - none -
fig|6666666.148656.peg.1280 CDS NC_015571.1 1423469 1422855 -2 - 615 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.148656.peg.1281 CDS NC_015571.1 1424316 1423474 -3 - 843 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.148656.peg.1282 CDS NC_015571.1 1424333 1424521 2 + 189 hypothetical protein - none -
fig|6666666.148656.peg.1283 CDS NC_015571.1 1424806 1424537 -1 - 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.148656.peg.1284 CDS NC_015571.1 1425079 1426110 1 + 1032 FIG00935720: hypothetical protein - none -
fig|6666666.148656.peg.1285 CDS NC_015571.1 1426763 1427644 2 + 882 Fructose-bisphosphate aldolase class I (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.148656.peg.1286 CDS NC_015571.1 1430294 1427787 -2 - 2508 ApeH acylamino-acid-releasing enzyme (EC 3.4.19.1) - none -
fig|6666666.148656.peg.1287 CDS NC_015571.1 1431376 1430330 -1 - 1047 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.148656.peg.1288 CDS NC_015571.1 1431597 1431373 -3 - 225 FIG00936261: hypothetical protein - none -
fig|6666666.148656.peg.1289 CDS NC_015571.1 1432711 1431581 -1 - 1131 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.148656.peg.1290 CDS NC_015571.1 1434668 1432848 -2 - 1821 glycosyl hydrolase family 29 (alpha-L-fucosidase) - none -
fig|6666666.148656.peg.1291 CDS NC_015571.1 1435112 1437139 2 + 2028 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.148656.peg.1292 CDS NC_015571.1 1437226 1437663 1 + 438 Ribose 5-phosphate isomerase B (EC 5.3.1.6) Pentose phosphate pathway
fig|6666666.148656.peg.1293 CDS NC_015571.1 1437698 1438135 2 + 438 FIG00936006: hypothetical protein - none -
fig|6666666.148656.peg.1294 CDS NC_015571.1 1440978 1438363 -3 - 2616 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.148656.peg.1295 CDS NC_015571.1 1442313 1440985 -3 - 1329 ABC transporter permease - none -
fig|6666666.148656.peg.1296 CDS NC_015571.1 1443711 1442335 -3 - 1377 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.148656.peg.1297 CDS NC_015571.1 1444534 1443863 -1 - 672 ABC transporter ATP-binding protein - none -
fig|6666666.148656.peg.1298 CDS NC_015571.1 1445864 1444614 -2 - 1251 ABC transporter permease - none -
fig|6666666.148656.peg.1299 CDS NC_015571.1 1445961 1445827 -3 - 135 hypothetical protein - none -
fig|6666666.148656.peg.1300 CDS NC_015571.1 1445922 1446074 3 + 153 hypothetical protein - none -
fig|6666666.148656.peg.1301 CDS NC_015571.1 1446128 1447633 2 + 1506 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.148656.peg.1302 CDS NC_015571.1 1447822 1448043 1 + 222 FIG00935798: hypothetical protein - none -
fig|6666666.148656.peg.1303 CDS NC_015571.1 1448126 1449067 2 + 942 FIG00936640: hypothetical protein - none -
fig|6666666.148656.peg.1304 CDS NC_015571.1 1449124 1450599 1 + 1476 GldJ - none -
fig|6666666.148656.peg.1305 CDS NC_015571.1 1450640 1451569 2 + 930 FIG00936075: hypothetical protein - none -
fig|6666666.148656.peg.1306 CDS NC_015571.1 1451573 1453123 2 + 1551 FIG00935779: hypothetical protein - none -
fig|6666666.148656.peg.1307 CDS NC_015571.1 1453132 1454211 1 + 1080 FIG00936301: hypothetical protein - none -
fig|6666666.148656.peg.1308 CDS NC_015571.1 1454372 1454962 2 + 591 Chromate transport protein - none -
fig|6666666.148656.peg.1309 CDS NC_015571.1 1454984 1455574 2 + 591 Chromate transport protein - none -
fig|6666666.148656.peg.1310 CDS NC_015571.1 1456290 1455712 -3 - 579 secretion activator protein, putative - none -
fig|6666666.148656.peg.1311 CDS NC_015571.1 1457781 1456891 -3 - 891 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster - none -
fig|6666666.148656.peg.1312 CDS NC_015571.1 1458921 1457797 -3 - 1125 Smf protein DNA processing chain A - none -
fig|6666666.148656.peg.1313 CDS NC_015571.1 1462618 1458914 -1 - 3705 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.148656.peg.1314 CDS NC_015571.1 1463494 1464579 1 + 1086 Mobile element protein - none -
fig|6666666.148656.peg.1315 CDS NC_015571.1 1465834 1464815 -1 - 1020 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.148656.peg.1316 CDS NC_015571.1 1466738 1465815 -2 - 924 FIG00936386: hypothetical protein - none -
fig|6666666.148656.peg.1317 CDS NC_015571.1 1466946 1466833 -3 - 114 hypothetical protein - none -
fig|6666666.148656.peg.1318 CDS NC_015571.1 1467284 1467165 -2 - 120 hypothetical protein - none -
fig|6666666.148656.peg.1319 CDS NC_015571.1 1472217 1467394 -3 - 4824 hemagglutinin, putative - none -
fig|6666666.148656.peg.1320 CDS NC_015571.1 1472227 1472394 1 + 168 hypothetical protein - none -
fig|6666666.148656.peg.1321 CDS NC_015571.1 1473061 1474146 1 + 1086 Mobile element protein - none -
fig|6666666.148656.peg.1322 CDS NC_015571.1 1474639 1474508 -1 - 132 ISPg3, transposase - none -
fig|6666666.148656.peg.1323 CDS NC_015571.1 1474855 1476147 1 + 1293 TPR domain protein - none -
fig|6666666.148656.peg.1324 CDS NC_015571.1 1476503 1476925 2 + 423 FIG00936370: hypothetical protein - none -
fig|6666666.148656.peg.1325 CDS NC_015571.1 1476935 1477807 2 + 873 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148656.peg.1326 CDS NC_015571.1 1477843 1479174 1 + 1332 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148656.peg.1327 CDS NC_015571.1 1479190 1480173 1 + 984 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148656.peg.1328 CDS NC_015571.1 1480200 1480847 3 + 648 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148656.peg.1329 CDS NC_015571.1 1480844 1481434 2 + 591 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148656.peg.1330 CDS NC_015571.1 1481507 1482031 2 + 525 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148656.peg.1331 CDS NC_015571.1 1483223 1482246 -2 - 978 Thiamin biosynthesis lipoprotein ApbE Iron-sulfur cluster assembly
fig|6666666.148656.peg.1332 CDS NC_015571.1 1483795 1483256 -1 - 540 Nitroreductase family protein - none -
fig|6666666.148656.peg.1333 CDS NC_015571.1 1484748 1483795 -3 - 954 Glycosyl transferase, family 2 - none -
fig|6666666.148656.peg.1334 CDS NC_015571.1 1485284 1484745 -2 - 540 FIG00936112: hypothetical protein - none -
fig|6666666.148656.peg.1335 CDS NC_015571.1 1485722 1485952 2 + 231 hypothetical protein - none -
fig|6666666.148656.peg.1336 CDS NC_015571.1 1486013 1486330 2 + 318 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.148656.peg.1337 CDS NC_015571.1 1486358 1486615 2 + 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.148656.peg.1338 CDS NC_015571.1 1486715 1487986 2 + 1272 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.148656.peg.1339 CDS NC_015571.1 1490659 1487999 -1 - 2661 Dipeptidyl-peptidase III (EC 3.4.14.4) - none -
fig|6666666.148656.peg.1340 CDS NC_015571.1 1490846 1490679 -2 - 168 hypothetical protein - none -
fig|6666666.148656.peg.1341 CDS NC_015571.1 1491207 1490920 -3 - 288 FIG00935683: hypothetical protein - none -
fig|6666666.148656.peg.1342 CDS NC_015571.1 1491271 1491654 1 + 384 FIG00936528: hypothetical protein - none -
fig|6666666.148656.peg.1343 CDS NC_015571.1 1491686 1492774 2 + 1089 FIG00936423: hypothetical protein - none -
fig|6666666.148656.peg.1344 CDS NC_015571.1 1492850 1493956 2 + 1107 putative periplasmic protein kinase ArgK and related GTPases of G3E family - none -
fig|6666666.148656.peg.1345 CDS NC_015571.1 1493985 1495163 3 + 1179 Na+/H+-dicarboxylate symporter - none -
fig|6666666.148656.peg.1346 CDS NC_015571.1 1495615 1495286 -1 - 330 hypothetical protein - none -
fig|6666666.148656.peg.1347 CDS NC_015571.1 1495781 1495644 -2 - 138 hypothetical protein - none -
fig|6666666.148656.peg.1348 CDS NC_015571.1 1497373 1495880 -1 - 1494 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.148656.peg.1349 CDS NC_015571.1 1498005 1497376 -3 - 630 Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.148656.peg.1350 CDS NC_015571.1 1499178 1498030 -3 - 1149 FIG00935951: hypothetical protein - none -
fig|6666666.148656.peg.1351 CDS NC_015571.1 1500416 1499262 -2 - 1155 FIG01176605: hypothetical protein - none -
fig|6666666.148656.peg.1352 CDS NC_015571.1 1501760 1500510 -2 - 1251 Imidazolonepropionase (EC 3.5.2.7) Histidine Degradation
fig|6666666.148656.peg.1353 CDS NC_015571.1 1502766 1501882 -3 - 885 Glutamate formiminotransferase (EC 2.1.2.5) @ Glutamate formyltransferase 5-FCL-like protein;
Histidine Degradation
fig|6666666.148656.peg.1354 CDS NC_015571.1 1503733 1502825 -1 - 909 hypothetical protein - none -
fig|6666666.148656.peg.1355 CDS NC_015571.1 1504371 1503853 -3 - 519 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.1356 CDS NC_015571.1 1505047 1507023 1 + 1977 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.148656.peg.1357 CDS NC_015571.1 1507251 1508159 3 + 909 FIG00935861: hypothetical protein - none -
fig|6666666.148656.peg.1358 CDS NC_015571.1 1509129 1508170 -3 - 960 Glycosyltransferase - none -
fig|6666666.148656.peg.1359 CDS NC_015571.1 1510084 1509182 -1 - 903 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.148656.peg.1360 CDS NC_015571.1 1510670 1510101 -2 - 570 FIG00936108: hypothetical protein - none -
fig|6666666.148656.peg.1361 CDS NC_015571.1 1510907 1510755 -2 - 153 hypothetical protein - none -
fig|6666666.148656.peg.1362 CDS NC_015571.1 1510958 1514317 2 + 3360 FIG00935998: hypothetical protein - none -
fig|6666666.148656.peg.1363 CDS NC_015571.1 1514331 1514867 3 + 537 FIG00936084: hypothetical protein - none -
fig|6666666.148656.peg.1364 CDS NC_015571.1 1515352 1515477 1 + 126 hypothetical protein - none -
fig|6666666.148656.peg.1365 CDS NC_015571.1 1515482 1515604 2 + 123 hypothetical protein - none -
fig|6666666.148656.peg.1366 CDS NC_015571.1 1517328 1516129 -3 - 1200 Methionine gamma-lyase (EC 4.4.1.11) Methionine Degradation
fig|6666666.148656.peg.1367 CDS NC_015571.1 1518960 1517491 -3 - 1470 FIG00936367: hypothetical protein - none -
fig|6666666.148656.peg.1368 CDS NC_015571.1 1519556 1518963 -2 - 594 FIG00935819: hypothetical protein - none -
fig|6666666.148656.peg.1369 CDS NC_015571.1 1519657 1520262 1 + 606 GTP-binding protein EngB Universal GTPases
fig|6666666.148656.peg.1370 CDS NC_015571.1 1520272 1521300 1 + 1029 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.148656.peg.1371 CDS NC_015571.1 1521343 1523439 1 + 2097 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.148656.peg.1372 CDS NC_015571.1 1523457 1524209 3 + 753 putative beta-phosphoglucomutase - none -
fig|6666666.148656.peg.1373 CDS NC_015571.1 1525761 1524304 -3 - 1458 FIG00936311: hypothetical protein - none -
fig|6666666.148656.peg.1374 CDS NC_015571.1 1526290 1527768 1 + 1479 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism
fig|6666666.148656.peg.1375 CDS NC_015571.1 1528019 1527834 -2 - 186 hypothetical protein - none -
fig|6666666.148656.peg.1376 CDS NC_015571.1 1528162 1528311 1 + 150 hypothetical protein - none -
fig|6666666.148656.peg.1377 CDS NC_015571.1 1528750 1529628 1 + 879 FIG00935706: hypothetical protein - none -
fig|6666666.148656.peg.1378 CDS NC_015571.1 1529654 1530394 2 + 741 FIG00936115: hypothetical protein - none -
fig|6666666.148656.peg.1379 CDS NC_015571.1 1530441 1531355 3 + 915 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.148656.peg.1380 CDS NC_015571.1 1531368 1531823 3 + 456 Aspartate carbamoyltransferase regulatory chain (PyrI) De Novo Pyrimidine Synthesis
fig|6666666.148656.peg.1381 CDS NC_015571.1 1531852 1532439 1 + 588 Flavoredoxin - none -
fig|6666666.148656.peg.1382 CDS NC_015571.1 1532477 1533073 2 + 597 LemA family protein - none -
fig|6666666.148656.peg.1383 CDS NC_015571.1 1533134 1534402 2 + 1269 Beta-propeller domains of methanol dehydrogenase type - none -
fig|6666666.148656.peg.1384 CDS NC_015571.1 1534449 1536470 3 + 2022 FIG00935733: hypothetical protein - none -
fig|6666666.148656.peg.1385 CDS NC_015571.1 1536471 1537298 3 + 828 probable glutamine ABC transporter - none -
fig|6666666.148656.peg.1386 CDS NC_015571.1 1538566 1537361 -1 - 1206 LSU m5C1962 methyltransferase RlmI RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.148656.peg.1387 CDS NC_015571.1 1539165 1538563 -3 - 603 3@1-5@1 exonuclease domain protein - none -
fig|6666666.148656.peg.1388 CDS NC_015571.1 1539766 1539206 -1 - 561 FIG00935795: hypothetical protein - none -
fig|6666666.148656.peg.1389 CDS NC_015571.1 1539945 1539814 -3 - 132 hypothetical protein - none -
fig|6666666.148656.peg.1390 CDS NC_015571.1 1540244 1542178 2 + 1935 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.148656.peg.1391 CDS NC_015571.1 1542209 1542670 2 + 462 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.148656.peg.1392 CDS NC_015571.1 1542934 1542809 -1 - 126 hypothetical protein - none -
fig|6666666.148656.peg.1393 CDS NC_015571.1 1543490 1543359 -2 - 132 hypothetical protein - none -
fig|6666666.148656.peg.1394 CDS NC_015571.1 1544116 1544373 1 + 258 hypothetical protein - none -
fig|6666666.148656.peg.1395 CDS NC_015571.1 1545031 1545390 1 + 360 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.148656.peg.1396 CDS NC_015571.1 1545400 1545786 1 + 387 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.148656.peg.1397 CDS NC_015571.1 1545921 1546766 3 + 846 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.148656.peg.1398 CDS NC_015571.1 1546905 1547729 3 + 825 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.148656.peg.1399 CDS NC_015571.1 1548049 1547894 -1 - 156 FIG00936565: hypothetical protein - none -
fig|6666666.148656.peg.1400 CDS NC_015571.1 1548082 1550118 1 + 2037 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.148656.peg.1401 CDS NC_015571.1 1551635 1550115 -2 - 1521 Na+/H+ antiporter - none -
fig|6666666.148656.peg.1402 CDS NC_015571.1 1551836 1551961 2 + 126 hypothetical protein - none -
fig|6666666.148656.peg.1403 CDS NC_015571.1 1552114 1553433 1 + 1320 Membrane-associated zinc metalloprotease - none -
fig|6666666.148656.peg.1404 CDS NC_015571.1 1553443 1555965 1 + 2523 Recombination inhibitory protein MutS2 DNA repair, bacterial MutL-MutS system
fig|6666666.148656.peg.1405 CDS NC_015571.1 1556129 1556320 2 + 192 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.148656.peg.1406 CDS NC_015571.1 1556397 1557599 3 + 1203 site-specific recombinase, phage integrase family / Ribosome hibernation protein YhbH Ribosome activity modulation
fig|6666666.148656.peg.1407 CDS NC_015571.1 1558349 1558188 -2 - 162 hypothetical protein - none -
fig|6666666.148656.peg.1408 CDS NC_015571.1 1558410 1559180 3 + 771 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.148656.peg.1409 CDS NC_015571.1 1559339 1559542 2 + 204 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.148656.peg.1410 CDS NC_015571.1 1559564 1560103 2 + 540 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.148656.peg.1411 CDS NC_015571.1 1560277 1560609 1 + 333 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.148656.peg.1412 CDS NC_015571.1 1560630 1561328 3 + 699 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.148656.peg.1413 CDS NC_015571.1 1561344 1561868 3 + 525 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.148656.peg.1414 CDS NC_015571.1 1561949 1562287 2 + 339 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.148656.peg.1415 CDS NC_015571.1 1562399 1566208 2 + 3810 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.148656.peg.1416 CDS NC_015571.1 1566274 1570575 1 + 4302 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.148656.peg.1417 CDS NC_015571.1 1570725 1570844 3 + 120 hypothetical protein - none -
fig|6666666.148656.peg.1418 CDS NC_015571.1 1570864 1571562 1 + 699 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.148656.peg.1419 CDS NC_015571.1 1571901 1571611 -3 - 291 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.148656.peg.1420 CDS NC_015571.1 1573009 1571915 -1 - 1095 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.148656.peg.1421 CDS NC_015571.1 1573536 1573006 -3 - 531 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148656.peg.1422 CDS NC_015571.1 1574956 1573544 -1 - 1413 Tpl protein - none -
fig|6666666.148656.peg.1423 CDS NC_015571.1 1576605 1575064 -3 - 1542 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) CBSS-226186.1.peg.4416;
Purine conversions;
pyrimidine conversions
fig|6666666.148656.peg.1424 CDS NC_015571.1 1577060 1576752 -2 - 309 Cell division ZapA family protein CBSS-226186.1.peg.4416
fig|6666666.148656.peg.1425 CDS NC_015571.1 1577363 1577067 -2 - 297 FIG034863: hypothetical protein CBSS-226186.1.peg.4416
fig|6666666.148656.peg.1426 CDS NC_015571.1 1578441 1578752 3 + 312 FIG00935648: hypothetical protein - none -
fig|6666666.148656.peg.1427 CDS NC_015571.1 1578801 1579622 3 + 822 FIG00935780: hypothetical protein - none -
fig|6666666.148656.peg.1428 CDS NC_015571.1 1579981 1582758 1 + 2778 FIG00935571: hypothetical protein - none -
fig|6666666.148656.peg.1429 CDS NC_015571.1 1582851 1583003 3 + 153 hypothetical protein - none -
fig|6666666.148656.peg.1430 CDS NC_015571.1 1584872 1583016 -2 - 1857 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.148656.peg.1431 CDS NC_015571.1 1585213 1584869 -1 - 345 hypothetical protein - none -
fig|6666666.148656.peg.1432 CDS NC_015571.1 1587084 1585204 -3 - 1881 FIG00937328: hypothetical protein - none -
fig|6666666.148656.peg.1433 CDS NC_015571.1 1588513 1587146 -1 - 1368 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) ECSIG4-SIG7;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.148656.peg.1434 CDS NC_015571.1 1590742 1588565 -1 - 2178 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.148656.peg.1435 CDS NC_015571.1 1592056 1590821 -1 - 1236 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.148656.peg.1436 CDS NC_015571.1 1592779 1592093 -1 - 687 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent
fig|6666666.148656.peg.1437 CDS NC_015571.1 1593994 1593134 -1 - 861 FIG00936717: hypothetical protein - none -
fig|6666666.148656.peg.1438 CDS NC_015571.1 1594189 1594052 -1 - 138 hypothetical protein - none -
fig|6666666.148656.peg.1439 CDS NC_015571.1 1595126 1594269 -2 - 858 FIG00936250: hypothetical protein - none -
fig|6666666.148656.peg.1440 CDS NC_015571.1 1595213 1595380 2 + 168 hypothetical protein - none -
fig|6666666.148656.peg.1441 CDS NC_015571.1 1595451 1595570 3 + 120 hypothetical protein - none -
fig|6666666.148656.peg.1442 CDS NC_015571.1 1595633 1595977 2 + 345 FIG00935574: hypothetical protein - none -
fig|6666666.148656.peg.1443 CDS NC_015571.1 1595958 1596617 3 + 660 FIG00935644: hypothetical protein - none -
fig|6666666.148656.peg.1444 CDS NC_015571.1 1597492 1596653 -1 - 840 esterase, putative - none -
fig|6666666.148656.peg.1445 CDS NC_015571.1 1597614 1597489 -3 - 126 hypothetical protein - none -
fig|6666666.148656.peg.1446 CDS NC_015571.1 1600992 1597825 -3 - 3168 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.148656.peg.1447 CDS NC_015571.1 1602243 1601032 -3 - 1212 outer membrane protein TolC, putative - none -
fig|6666666.148656.peg.1448 CDS NC_015571.1 1605532 1602500 -1 - 3033 putative cation efflux system - none -
fig|6666666.148656.peg.1449 CDS NC_015571.1 1606706 1605606 -2 - 1101 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.148656.peg.1450 CDS NC_015571.1 1607792 1606725 -2 - 1068 hypothetical protein - none -
fig|6666666.148656.peg.1451 CDS NC_015571.1 1608971 1607919 -2 - 1053 hypothetical protein - none -
fig|6666666.148656.peg.1452 CDS NC_015571.1 1610127 1609060 -3 - 1068 hypothetical protein - none -
fig|6666666.148656.peg.1453 CDS NC_015571.1 1610429 1611157 2 + 729 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.148656.peg.1454 CDS NC_015571.1 1611536 1611339 -2 - 198 hypothetical protein - none -
fig|6666666.148656.peg.1455 CDS NC_015571.1 1611791 1611660 -2 - 132 hypothetical protein - none -
fig|6666666.148656.peg.1456 CDS NC_015571.1 1611766 1611909 1 + 144 hypothetical protein - none -
fig|6666666.148656.peg.1457 CDS NC_015571.1 1612057 1613916 1 + 1860 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) - none -
fig|6666666.148656.peg.1458 CDS NC_015571.1 1613943 1614950 3 + 1008 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) - none -
fig|6666666.148656.peg.1459 CDS NC_015571.1 1616584 1615178 -1 - 1407 NOL1/NOP2/sun family protein - none -
fig|6666666.148656.peg.1460 CDS NC_015571.1 1617301 1616588 -1 - 714 Tetrapyrrole methylase family protein - none -
fig|6666666.148656.peg.1461 CDS NC_015571.1 1618454 1617339 -2 - 1116 FIG00935748: hypothetical protein - none -
fig|6666666.148656.peg.1462 CDS NC_015571.1 1619356 1618613 -1 - 744 capsular polysaccharide biosythesis protein, putative - none -
fig|6666666.148656.peg.1463 CDS NC_015571.1 1621831 1619366 -1 - 2466 Tyrosine-protein kinase Wzc (EC 2.7.10.2) - none -
fig|6666666.148656.peg.1464 CDS NC_015571.1 1622644 1621838 -1 - 807 Polysaccharide export outer membrane protein - none -
fig|6666666.148656.peg.1465 CDS NC_015571.1 1622877 1622761 -3 - 117 hypothetical protein - none -
fig|6666666.148656.peg.1466 CDS NC_015571.1 1622896 1623768 1 + 873 FIG00936242: hypothetical protein - none -
fig|6666666.148656.peg.1467 CDS NC_015571.1 1623804 1624664 3 + 861 FIG00936461: hypothetical protein - none -
fig|6666666.148656.peg.1468 CDS NC_015571.1 1624761 1627301 3 + 2541 FIG00935563: hypothetical protein - none -
fig|6666666.148656.peg.1469 CDS NC_015571.1 1627413 1627673 3 + 261 hypothetical protein - none -
fig|6666666.148656.peg.1470 CDS NC_015571.1 1627982 1629001 2 + 1020 hemagglutinin-related protein - none -
fig|6666666.148656.peg.1471 CDS NC_015571.1 1629190 1631169 1 + 1980 Oligopeptide transporter, OPT family - none -
fig|6666666.148656.peg.1472 CDS NC_015571.1 1631186 1632403 2 + 1218 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.148656.peg.1473 CDS NC_015571.1 1632491 1633240 2 + 750 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.148656.peg.1474 CDS NC_015571.1 1633296 1634030 3 + 735 Pantothenate kinase type III, CoaX-like (EC 2.7.1.33) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.148656.peg.1475 CDS NC_015571.1 1634023 1635327 1 + 1305 putative outer membrane protein - none -
fig|6666666.148656.peg.1476 CDS NC_015571.1 1635339 1636721 3 + 1383 TPR domain protein - none -
fig|6666666.148656.peg.1477 CDS NC_015571.1 1636818 1637456 3 + 639 FIG00935793: hypothetical protein - none -
fig|6666666.148656.peg.1478 CDS NC_015571.1 1637453 1638706 2 + 1254 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.148656.peg.1479 CDS NC_015571.1 1638813 1640960 3 + 2148 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.148656.peg.1480 CDS NC_015571.1 1641249 1642523 3 + 1275 FIG00935917: hypothetical protein - none -
fig|6666666.148656.peg.1481 CDS NC_015571.1 1643319 1643432 3 + 114 hypothetical protein - none -
fig|6666666.148656.peg.1482 CDS NC_015571.1 1643977 1644885 1 + 909 DNA methylase N-4/N-6 domain protein - none -
fig|6666666.148656.peg.1483 CDS NC_015571.1 1645237 1645908 1 + 672 hypothetical protein - none -
fig|6666666.148656.peg.1484 CDS NC_015571.1 1647882 1646545 -3 - 1338 transporter, putative - none -
fig|6666666.148656.peg.1485 CDS NC_015571.1 1649274 1647985 -3 - 1290 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.148656.peg.1486 CDS NC_015571.1 1650542 1649271 -2 - 1272 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.148656.peg.1487 CDS NC_015571.1 1651173 1650571 -3 - 603 ferric uptake transcriptional regulator - none -
fig|6666666.148656.peg.1488 CDS NC_015571.1 1652029 1651157 -1 - 873 FIG00936211: hypothetical protein - none -
fig|6666666.148656.peg.1489 CDS NC_015571.1 1653052 1652042 -1 - 1011 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.148656.peg.1490 CDS NC_015571.1 1653326 1653075 -2 - 252 FIG00935839: hypothetical protein - none -
fig|6666666.148656.peg.1491 CDS NC_015571.1 1653536 1653405 -2 - 132 hypothetical protein - none -
fig|6666666.148656.peg.1492 CDS NC_015571.1 1654012 1655070 1 + 1059 FIG00935853: hypothetical protein - none -
fig|6666666.148656.peg.1493 CDS NC_015571.1 1655081 1656052 2 + 972 Epoxyqueuosine (oQ) reductase QueG Queuosine-Archaeosine Biosynthesis
fig|6666666.148656.peg.1494 CDS NC_015571.1 1656292 1656176 -1 - 117 FIG00935665: hypothetical protein - none -
fig|6666666.148656.peg.1495 CDS NC_015571.1 1656395 1656583 2 + 189 hypothetical protein - none -
fig|6666666.148656.peg.1496 CDS NC_015571.1 1657716 1656679 -3 - 1038 Low-specificity L-threonine aldolase (EC 4.1.2.48) - none -
fig|6666666.148656.peg.1497 CDS NC_015571.1 1658886 1657756 -3 - 1131 Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis
fig|6666666.148656.peg.1498 CDS NC_015571.1 1660430 1658883 -2 - 1548 COG1649 predicted glycoside hydrolase - none -
fig|6666666.148656.peg.1499 CDS NC_015571.1 1661265 1660420 -3 - 846 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.148656.peg.1500 CDS NC_015571.1 1661426 1662184 2 + 759 FIG00935545: hypothetical protein - none -
fig|6666666.148656.peg.1501 CDS NC_015571.1 1662988 1662275 -1 - 714 Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.1502 CDS NC_015571.1 1664291 1663101 -2 - 1191 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Glycine Biosynthesis;
Glycine and Serine Utilization
fig|6666666.148656.peg.1503 CDS NC_015571.1 1664798 1664367 -2 - 432 FIG00937286: hypothetical protein - none -
fig|6666666.148656.peg.1504 CDS NC_015571.1 1665513 1664905 -3 - 609 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.148656.peg.1505 CDS NC_015571.1 1666527 1665520 -3 - 1008 FIG00935560: hypothetical protein - none -
fig|6666666.148656.peg.1506 CDS NC_015571.1 1666993 1666655 -1 - 339 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.148656.peg.1507 CDS NC_015571.1 1667843 1667076 -2 - 768 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.148656.peg.1508 CDS NC_015571.1 1667999 1667868 -2 - 132 hypothetical protein - none -
fig|6666666.148656.peg.1509 CDS NC_015571.1 1668458 1668300 -2 - 159 hypothetical protein - none -
fig|6666666.148656.peg.1510 CDS NC_015571.1 1668468 1669520 3 + 1053 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.148656.peg.1511 CDS NC_015571.1 1669567 1671048 1 + 1482 Polysaccharide biosynthesis protein - none -
fig|6666666.148656.peg.1512 CDS NC_015571.1 1671070 1672488 1 + 1419 FIG00761799: membrane protein - none -
fig|6666666.148656.peg.1513 CDS NC_015571.1 1672510 1674642 1 + 2133 FIG00936757: hypothetical protein - none -
fig|6666666.148656.peg.1514 CDS NC_015571.1 1674863 1674976 2 + 114 hypothetical protein - none -
fig|6666666.148656.peg.1515 CDS NC_015571.1 1675170 1675012 -3 - 159 hypothetical protein - none -
fig|6666666.148656.peg.1516 CDS NC_015571.1 1675474 1675587 1 + 114 hypothetical protein - none -
fig|6666666.148656.peg.1517 CDS NC_015571.1 1675806 1677200 3 + 1395 FIG00935678: hypothetical protein - none -
fig|6666666.148656.peg.1518 CDS NC_015571.1 1677602 1678288 2 + 687 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.148656.peg.1519 CDS NC_015571.1 1678307 1678792 2 + 486 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Methionine Degradation
fig|6666666.148656.peg.1520 CDS NC_015571.1 1679232 1679351 3 + 120 Mobile element protein - none -
fig|6666666.148656.peg.1521 CDS NC_015571.1 1679608 1680738 1 + 1131 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148656.peg.1522 CDS NC_015571.1 1680785 1681837 2 + 1053 membrane protein, putative - none -
fig|6666666.148656.peg.1523 CDS NC_015571.1 1681870 1682331 1 + 462 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.148656.peg.1524 CDS NC_015571.1 1682371 1684542 1 + 2172 Dipeptidyl peptidase IV - none -
fig|6666666.148656.peg.1525 CDS NC_015571.1 1684996 1684595 -1 - 402 hypothetical protein - none -
fig|6666666.148656.peg.1526 CDS NC_015571.1 1685249 1685494 2 + 246 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.148656.peg.1527 CDS NC_015571.1 1685607 1685729 3 + 123 hypothetical protein - none -
fig|6666666.148656.peg.1528 CDS NC_015571.1 1685747 1687957 2 + 2211 hemagglutinin, putative - none -
fig|6666666.148656.peg.1529 CDS NC_015571.1 1689140 1688538 -2 - 603 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.148656.peg.1530 CDS NC_015571.1 1689990 1689130 -3 - 861 FIG00935598: hypothetical protein - none -
fig|6666666.148656.peg.1531 CDS NC_015571.1 1690462 1690007 -1 - 456 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.148656.peg.1532 CDS NC_015571.1 1691730 1690498 -3 - 1233 Spore maturation protein A-like protein Spore Core Dehydration
fig|6666666.148656.peg.1533 CDS NC_015571.1 1692316 1691750 -1 - 567 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.148656.peg.1534 CDS NC_015571.1 1693239 1692349 -3 - 891 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.148656.peg.1535 CDS NC_015571.1 1696672 1693331 -1 - 3342 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.148656.peg.1536 CDS NC_015571.1 1698343 1696766 -1 - 1578 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.148656.peg.1537 CDS NC_015571.1 1699587 1698340 -3 - 1248 FIG00935721: hypothetical protein - none -
fig|6666666.148656.peg.1538 CDS NC_015571.1 1702641 1699618 -3 - 3024 FIG00936431: hypothetical protein - none -
fig|6666666.148656.peg.1539 CDS NC_015571.1 1703342 1702617 -2 - 726 metal-dependent membrane protease - none -
fig|6666666.148656.peg.1540 CDS NC_015571.1 1705658 1704021 -2 - 1638 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.148656.peg.1541 CDS NC_015571.1 1705966 1705697 -1 - 270 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.148656.peg.1542 CDS NC_015571.1 1707091 1706183 -1 - 909 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.148656.peg.1543 CDS NC_015571.1 1708584 1707088 -3 - 1497 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.148656.peg.1544 CDS NC_015571.1 1708753 1708899 1 + 147 hypothetical protein - none -
fig|6666666.148656.peg.1545 CDS NC_015571.1 1709239 1710858 1 + 1620 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.148656.peg.1546 CDS NC_015571.1 1710985 1712868 1 + 1884 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.148656.peg.1547 CDS NC_015571.1 1712959 1714842 1 + 1884 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.148656.peg.1548 CDS NC_015571.1 1714876 1715949 1 + 1074 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.148656.peg.1549 CDS NC_015571.1 1715968 1719195 1 + 3228 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.148656.peg.1550 CDS NC_015571.1 1721318 1719390 -2 - 1929 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.148656.peg.1551 CDS NC_015571.1 1722291 1721443 -3 - 849 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.148656.peg.1552 CDS NC_015571.1 1723340 1723149 -2 - 192 hypothetical protein - none -
fig|6666666.148656.peg.1553 CDS NC_015571.1 1723486 1725969 1 + 2484 putative ferric aerobactin receptor - none -
fig|6666666.148656.peg.1554 CDS NC_015571.1 1726004 1726123 2 + 120 hypothetical protein - none -
fig|6666666.148656.peg.1555 CDS NC_015571.1 1726770 1726150 -3 - 621 FIG00936056: hypothetical protein - none -
fig|6666666.148656.peg.1556 CDS NC_015571.1 1727018 1726803 -2 - 216 hypothetical protein - none -
fig|6666666.148656.peg.1557 CDS NC_015571.1 1727099 1728559 2 + 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.148656.peg.1558 CDS NC_015571.1 1729476 1730864 3 + 1389 Outer membrane efflux protein precursor - none -
fig|6666666.148656.peg.1559 CDS NC_015571.1 1730899 1731960 1 + 1062 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.148656.peg.1560 CDS NC_015571.1 1731957 1735106 3 + 3150 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.148656.peg.1561 CDS NC_015571.1 1735091 1735390 2 + 300 FIG00936253: hypothetical protein - none -
fig|6666666.148656.peg.1562 CDS NC_015571.1 1736907 1735822 -3 - 1086 Mobile element protein - none -
fig|6666666.148656.peg.1563 CDS NC_015571.1 1737403 1736972 -1 - 432 FIG00935678: hypothetical protein - none -
fig|6666666.148656.peg.1564 CDS NC_015571.1 1737735 1737622 -3 - 114 hypothetical protein - none -
fig|6666666.148656.peg.1565 CDS NC_015571.1 1738117 1738281 1 + 165 hypothetical protein - none -
fig|6666666.148656.peg.1566 CDS NC_015571.1 1739429 1738344 -2 - 1086 Mobile element protein - none -
fig|6666666.148656.peg.1567 CDS NC_015571.1 1739672 1739559 -2 - 114 hypothetical protein - none -
fig|6666666.148656.peg.1568 CDS NC_015571.1 1739671 1740345 1 + 675 Integrase - none -
fig|6666666.148656.peg.1569 CDS NC_015571.1 1741095 1740460 -3 - 636 hypothetical protein - none -
fig|6666666.148656.peg.1570 CDS NC_015571.1 1741597 1741154 -1 - 444 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.1571 CDS NC_015571.1 1742115 1741864 -3 - 252 FIG00938293: hypothetical protein - none -
fig|6666666.148656.peg.1572 CDS NC_015571.1 1742449 1743630 1 + 1182 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.148656.peg.1573 CDS NC_015571.1 1743882 1747400 3 + 3519 Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) Methionine Degradation;
Pyruvate:ferredoxin oxidoreductase
fig|6666666.148656.peg.1574 CDS NC_015571.1 1748330 1748121 -2 - 210 hypothetical protein - none -
fig|6666666.148656.peg.1575 CDS NC_015571.1 1751279 1748409 -2 - 2871 Lysyl endopeptidase (EC 3.4.21.50) Serine endopeptidase (EC 3.4.21.-)
fig|6666666.148656.peg.1576 CDS NC_015571.1 1752275 1751757 -2 - 519 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.1577 CDS NC_015571.1 1752966 1754279 3 + 1314 hypothetical protein - none -
fig|6666666.148656.peg.1578 CDS NC_015571.1 1754352 1755026 3 + 675 FIG00935768: hypothetical protein - none -
fig|6666666.148656.peg.1579 CDS NC_015571.1 1756380 1755559 -3 - 822 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.148656.peg.1580 CDS NC_015571.1 1757674 1756400 -1 - 1275 S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase - none -
fig|6666666.148656.peg.1581 CDS NC_015571.1 1759104 1757749 -3 - 1356 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.148656.peg.1582 CDS NC_015571.1 1759321 1760997 1 + 1677 putative membrane protein - none -
fig|6666666.148656.peg.1583 CDS NC_015571.1 1763271 1762729 -3 - 543 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.1584 CDS NC_015571.1 1764373 1763807 -1 - 567 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.148656.peg.1585 CDS NC_015571.1 1766060 1764504 -2 - 1557 FIG00935524: hypothetical protein - none -
fig|6666666.148656.peg.1586 CDS NC_015571.1 1766256 1767269 3 + 1014 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.148656.peg.1587 CDS NC_015571.1 1767941 1768876 2 + 936 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.148656.peg.1588 CDS NC_015571.1 1768876 1769349 1 + 474 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.148656.peg.1589 CDS NC_015571.1 1769359 1771560 1 + 2202 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.148656.peg.1590 CDS NC_015571.1 1771571 1773034 2 + 1464 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.148656.peg.1591 CDS NC_015571.1 1773049 1774308 1 + 1260 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.148656.peg.1592 CDS NC_015571.1 1774332 1775684 3 + 1353 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.148656.peg.1593 CDS NC_015571.1 1775696 1776952 2 + 1257 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.148656.peg.1594 CDS NC_015571.1 1776949 1778088 1 + 1140 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.148656.peg.1595 CDS NC_015571.1 1778088 1779458 3 + 1371 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.148656.peg.1596 CDS NC_015571.1 1779452 1780228 2 + 777 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.148656.peg.1597 CDS NC_015571.1 1780337 1781716 2 + 1380 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.148656.peg.1598 CDS NC_015571.1 1781719 1783092 1 + 1374 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.148656.peg.1599 CDS NC_015571.1 1783124 1783573 2 + 450 Transamidase GatB domain protein Macromolecular synthesis operon
fig|6666666.148656.peg.1600 CDS NC_015571.1 1785026 1784394 -2 - 633 FIG00896360: hypothetical protein - none -
fig|6666666.148656.peg.1601 CDS NC_015571.1 1785899 1785078 -2 - 822 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.148656.peg.1602 CDS NC_015571.1 1787490 1785970 -3 - 1521 hypothetical protein - none -
fig|6666666.148656.peg.1603 CDS NC_015571.1 1788208 1788465 1 + 258 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.148656.peg.1604 CDS NC_015571.1 1788682 1790178 1 + 1497 HtrA protease/chaperone protein Periplasmic Stress Response
fig|6666666.148656.peg.1605 CDS NC_015571.1 1790368 1791231 1 + 864 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.148656.peg.1606 CDS NC_015571.1 1791328 1791681 1 + 354 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.148656.peg.1607 CDS NC_015571.1 1791685 1791957 1 + 273 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.148656.peg.1608 CDS NC_015571.1 1791982 1792521 1 + 540 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.148656.peg.1609 CDS NC_015571.1 1792797 1794752 3 + 1956 membrane protein, putative - none -
fig|6666666.148656.peg.1610 CDS NC_015571.1 1794755 1795972 2 + 1218 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.148656.peg.1611 CDS NC_015571.1 1796318 1796202 -2 - 117 hypothetical protein - none -
fig|6666666.148656.peg.1612 CDS NC_015571.1 1796944 1797984 1 + 1041 low affinity penicillin binding protein - none -
fig|6666666.148656.peg.1613 CDS NC_015571.1 1798014 1798709 3 + 696 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.148656.peg.1614 CDS NC_015571.1 1798706 1799575 2 + 870 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.148656.peg.1615 CDS NC_015571.1 1800602 1799559 -2 - 1044 FIG00935961: hypothetical protein - none -
fig|6666666.148656.peg.1616 CDS NC_015571.1 1800864 1801358 3 + 495 FIG00935532: hypothetical protein - none -
fig|6666666.148656.peg.1617 CDS NC_015571.1 1801827 1801973 3 + 147 hypothetical protein - none -
fig|6666666.148656.peg.1618 CDS NC_015571.1 1801970 1802089 2 + 120 hypothetical protein - none -
fig|6666666.148656.peg.1619 CDS NC_015571.1 1802104 1802256 1 + 153 hypothetical protein - none -
fig|6666666.148656.peg.1620 CDS NC_015571.1 1802447 1803400 2 + 954 FIG00936069: hypothetical protein - none -
fig|6666666.148656.peg.1621 CDS NC_015571.1 1803397 1806087 1 + 2691 Protease - none -
fig|6666666.148656.peg.1622 CDS NC_015571.1 1806150 1806848 3 + 699 FIG00935784: hypothetical protein - none -
fig|6666666.148656.peg.1623 CDS NC_015571.1 1807045 1807785 1 + 741 FIG00936619: hypothetical protein - none -
fig|6666666.148656.peg.1624 CDS NC_015571.1 1807991 1809790 2 + 1800 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.148656.peg.1625 CDS NC_015571.1 1809805 1809930 1 + 126 hypothetical protein - none -
fig|6666666.148656.peg.1626 CDS NC_015571.1 1809893 1810927 2 + 1035 FIG00936297: hypothetical protein - none -
fig|6666666.148656.peg.1627 CDS NC_015571.1 1811331 1811897 3 + 567 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.148656.peg.1628 CDS NC_015571.1 1812063 1813610 3 + 1548 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.148656.peg.1629 CDS NC_015571.1 1813816 1816353 1 + 2538 ATP-dependent protease La (EC 3.4.21.53) Type I Proteolysis in bacteria, ATP-dependent
fig|6666666.148656.peg.1630 CDS NC_015571.1 1816350 1816898 3 + 549 FIG00935813: hypothetical protein - none -
fig|6666666.148656.peg.1631 CDS NC_015571.1 1816895 1818187 2 + 1293 FIG00694335: hypothetical protein - none -
fig|6666666.148656.peg.1632 CDS NC_015571.1 1818219 1818974 3 + 756 Triosephosphate isomerase (EC 5.3.1.1) Glycolysis and Gluconeogenesis
fig|6666666.148656.peg.1633 CDS NC_015571.1 1819036 1819542 1 + 507 FIG00935559: hypothetical protein - none -
fig|6666666.148656.peg.1634 CDS NC_015571.1 1819546 1820127 1 + 582 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148656.peg.1635 CDS NC_015571.1 1821489 1821196 -3 - 294 RNA-binding protein - none -
fig|6666666.148656.peg.1636 CDS NC_015571.1 1822476 1821739 -3 - 738 Lipopolysaccharide ABC transporter, ATP-binding protein LptB KDO2-Lipid A biosynthesis
fig|6666666.148656.peg.1637 CDS NC_015571.1 1823419 1822553 -1 - 867 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.148656.peg.1638 CDS NC_015571.1 1823497 1824213 1 + 717 Pyridoxine 5@1-phosphate synthase (EC 2.6.99.2) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.148656.peg.1639 CDS NC_015571.1 1824251 1824985 2 + 735 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.148656.peg.1640 CDS NC_015571.1 1825024 1825401 1 + 378 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.148656.peg.1641 CDS NC_015571.1 1825406 1826233 2 + 828 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.148656.peg.1642 CDS NC_015571.1 1826248 1826793 1 + 546 DJ-1/YajL/PfpI superfamily, includes chaperone protein YajL (former ThiJ), parkinsonism-associated protein DJ-1, peptidases PfpI, Hsp31 - none -
fig|6666666.148656.peg.1643 CDS NC_015571.1 1827765 1826893 -3 - 873 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.148656.peg.1644 CDS NC_015571.1 1829126 1827762 -2 - 1365 FIG00936724: hypothetical protein - none -
fig|6666666.148656.peg.1645 CDS NC_015571.1 1830159 1829119 -3 - 1041 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.148656.peg.1646 CDS NC_015571.1 1831238 1830165 -2 - 1074 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis
fig|6666666.148656.peg.1647 CDS NC_015571.1 1833055 1831268 -1 - 1788 signal peptide peptidase SppA, 67K type - none -
fig|6666666.148656.peg.1648 CDS NC_015571.1 1834141 1834019 -1 - 123 hypothetical protein - none -
fig|6666666.148656.peg.1649 CDS NC_015571.1 1834209 1834349 3 + 141 hypothetical protein - none -
fig|6666666.148656.peg.1650 CDS NC_015571.1 1836466 1834346 -1 - 2121 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.148656.peg.1651 CDS NC_015571.1 1837643 1836480 -2 - 1164 Adenosylcobinamide amidohydrolase (EC 3.5.1.90) Coenzyme B12 biosynthesis
fig|6666666.148656.peg.1652 CDS NC_015571.1 1838668 1837667 -1 - 1002 iron compound ABC transporter, ATP-binding protein - none -
fig|6666666.148656.peg.1653 CDS NC_015571.1 1839710 1838676 -2 - 1035 Vitamin B12 ABC transporter, permease component BtuC Coenzyme B12 biosynthesis
fig|6666666.148656.peg.1654 CDS NC_015571.1 1840882 1839707 -1 - 1176 iron compound ABC transporter, periplasmic iron compound-binding protein, putative - none -
fig|6666666.148656.peg.1655 CDS NC_015571.1 1841219 1841380 2 + 162 hypothetical protein - none -
fig|6666666.148656.peg.1656 CDS NC_015571.1 1841464 1842048 1 + 585 FIG00936574: hypothetical protein - none -
fig|6666666.148656.peg.1657 CDS NC_015571.1 1842556 1842173 -1 - 384 FIG00936509: hypothetical protein - none -
fig|6666666.148656.peg.1658 CDS NC_015571.1 1843214 1842663 -2 - 552 HDIG domain protein - none -
fig|6666666.148656.peg.1659 CDS NC_015571.1 1843775 1843491 -2 - 285 Stress responsive alpha-beta barrel domain protein Dabb - none -
fig|6666666.148656.peg.1660 CDS NC_015571.1 1845046 1843805 -1 - 1242 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.148656.peg.1661 CDS NC_015571.1 1846277 1845105 -2 - 1173 immunoreactive 46 kDa antigen PG99 - none -
fig|6666666.148656.peg.1662 CDS NC_015571.1 1846682 1846530 -2 - 153 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.148656.peg.1663 CDS NC_015571.1 1847343 1846744 -3 - 600 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.148656.peg.1664 CDS NC_015571.1 1847904 1847383 -3 - 522 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) KDO2-Lipid A biosynthesis
fig|6666666.148656.peg.1665 CDS NC_015571.1 1848733 1847921 -1 - 813 FIG137884: hypothetical protein Coenzyme A Biosynthesis cluster
fig|6666666.148656.peg.1666 CDS NC_015571.1 1849298 1848726 -2 - 573 Nitroreductase family protein - none -
fig|6666666.148656.peg.1667 CDS NC_015571.1 1849438 1849277 -1 - 162 hypothetical protein - none -
fig|6666666.148656.peg.1668 CDS NC_015571.1 1849671 1849540 -3 - 132 hypothetical protein - none -
fig|6666666.148656.peg.1669 CDS NC_015571.1 1850022 1849867 -3 - 156 hypothetical protein - none -
fig|6666666.148656.peg.1670 CDS NC_015571.1 1850012 1851418 2 + 1407 Oxidoreductase, Gfo/Idh/MocA family - none -
fig|6666666.148656.peg.1671 CDS NC_015571.1 1851432 1854803 3 + 3372 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.148656.peg.1672 CDS NC_015571.1 1854886 1855974 1 + 1089 MdsC protein - none -
fig|6666666.148656.peg.1673 CDS NC_015571.1 1856892 1857092 3 + 201 hypothetical protein - none -
fig|6666666.148656.peg.1674 CDS NC_015571.1 1857094 1859271 1 + 2178 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.148656.peg.1675 CDS NC_015571.1 1859300 1860181 2 + 882 Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.1676 CDS NC_015571.1 1860602 1861438 2 + 837 Vitamin B12 ABC transporter, B12-binding component BtuF Coenzyme B12 biosynthesis
fig|6666666.148656.peg.1677 CDS NC_015571.1 1861435 1862505 1 + 1071 Vitamin B12 ABC transporter, permease component BtuC Coenzyme B12 biosynthesis
fig|6666666.148656.peg.1678 CDS NC_015571.1 1862549 1863307 2 + 759 FIG00936204: hypothetical protein - none -
fig|6666666.148656.peg.1679 CDS NC_015571.1 1864294 1863701 -1 - 594 Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8) Aromatic amino acid interconversions with aryl acids;
Indole-pyruvate oxidoreductase complex
fig|6666666.148656.peg.1680 CDS NC_015571.1 1865928 1864321 -3 - 1608 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) Aromatic amino acid interconversions with aryl acids;
Indole-pyruvate oxidoreductase complex
fig|6666666.148656.peg.1681 CDS NC_015571.1 1866767 1866006 -2 - 762 FIG00935512: hypothetical protein - none -
fig|6666666.148656.peg.1682 CDS NC_015571.1 1867012 1866878 -1 - 135 hypothetical protein - none -
fig|6666666.148656.peg.1683 CDS NC_015571.1 1867047 1867169 3 + 123 hypothetical protein - none -
fig|6666666.148656.peg.1684 CDS NC_015571.1 1867195 1868388 1 + 1194 Carboxynorspermidine dehydrogenase - none -
fig|6666666.148656.peg.1685 CDS NC_015571.1 1868501 1868385 -2 - 117 hypothetical protein - none -
fig|6666666.148656.peg.1686 CDS NC_015571.1 1868425 1868937 1 + 513 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.148656.peg.1687 CDS NC_015571.1 1869140 1870474 2 + 1335 Type I secretion system, outer membrane component LapE - none -
fig|6666666.148656.peg.1688 CDS NC_015571.1 1870514 1871767 2 + 1254 ABC transporter permease - none -
fig|6666666.148656.peg.1689 CDS NC_015571.1 1872417 1874768 3 + 2352 ABC transporter, permease protein, putative - none -
fig|6666666.148656.peg.1690 CDS NC_015571.1 1874801 1877170 2 + 2370 putative FtsX-related transmembrane transport protein - none -
fig|6666666.148656.peg.1691 CDS NC_015571.1 1877197 1879572 1 + 2376 FIG00898232: hypothetical protein - none -
fig|6666666.148656.peg.1692 CDS NC_015571.1 1879665 1880324 3 + 660 ABC transporter ATP-binding protein - none -
fig|6666666.148656.peg.1693 CDS NC_015571.1 1882160 1880607 -2 - 1554 FIG00936050: hypothetical protein - none -
fig|6666666.148656.peg.1694 CDS NC_015571.1 1883999 1882644 -2 - 1356 Succinate-semialdehyde dehydrogenase, CoA-dependent - none -
fig|6666666.148656.peg.1695 CDS NC_015571.1 1884046 1884198 1 + 153 hypothetical protein - none -
fig|6666666.148656.peg.1696 CDS NC_015571.1 1885310 1884195 -2 - 1116 NAD-dependent 4-hydroxybutyrate dehydrogenase (EC 1.1.1.61) - none -
fig|6666666.148656.peg.1697 CDS NC_015571.1 1886656 1885361 -1 - 1296 4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-) - none -
fig|6666666.148656.peg.1698 CDS NC_015571.1 1886946 1886662 -3 - 285 NifU-related protein - none -
fig|6666666.148656.peg.1699 CDS NC_015571.1 1888479 1887019 -3 - 1461 4-hydroxybutanoyl-CoA dehydratase (EC 4.2.1.-) / Vinylacetyl-CoA Delta-isomerase (EC 5.3.3.3) - none -
fig|6666666.148656.peg.1700 CDS NC_015571.1 1890322 1889180 -1 - 1143 immunoreactive 42 kDa antigen PG33 - none -
fig|6666666.148656.peg.1701 CDS NC_015571.1 1891541 1890369 -2 - 1173 immunoreactive 43 kDa antigen PG32 - none -
fig|6666666.148656.peg.1702 CDS NC_015571.1 1892822 1891851 -2 - 972 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148656.peg.1703 CDS NC_015571.1 1895436 1892866 -3 - 2571 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.148656.peg.1704 CDS NC_015571.1 1895446 1895871 1 + 426 hypothetical protein - none -
fig|6666666.148656.peg.1705 CDS NC_015571.1 1896040 1896576 1 + 537 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.1706 CDS NC_015571.1 1896629 1897666 2 + 1038 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.1707 CDS NC_015571.1 1897673 1898455 2 + 783 Cobalamin synthase (EC 2.7.8.26) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148656.peg.1708 CDS NC_015571.1 1898457 1898996 3 + 540 Alpha-ribazole-5@1-phosphate phosphatase (EC 3.1.3.73) Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Phosphoglycerate mutase protein family
fig|6666666.148656.peg.1709 CDS NC_015571.1 1899058 1899882 1 + 825 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.148656.peg.1710 CDS NC_015571.1 1899900 1900331 3 + 432 FIG00935976: hypothetical protein - none -
fig|6666666.148656.peg.1711 CDS NC_015571.1 1900366 1900503 1 + 138 hypothetical protein - none -
fig|6666666.148656.peg.1712 CDS NC_015571.1 1903111 1900565 -1 - 2547 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.148656.peg.1713 CDS NC_015571.1 1904107 1903277 -1 - 831 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.148656.peg.1714 CDS NC_015571.1 1904908 1904135 -1 - 774 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.148656.peg.1715 CDS NC_015571.1 1905513 1904926 -3 - 588 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.148656.peg.1716 CDS NC_015571.1 1905599 1905730 2 + 132 hypothetical protein - none -
fig|6666666.148656.peg.1717 CDS NC_015571.1 1906266 1906150 -3 - 117 hypothetical protein - none -
fig|6666666.148656.peg.1718 CDS NC_015571.1 1906610 1906263 -2 - 348 hypothetical protein - none -
fig|6666666.148656.peg.1719 CDS NC_015571.1 1907228 1906632 -2 - 597 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.148656.peg.1720 CDS NC_015571.1 1908144 1907404 -3 - 741 Cytoplasmic copper homeostasis protein CutC Copper homeostasis: copper tolerance
fig|6666666.148656.peg.1721 CDS NC_015571.1 1909075 1908155 -1 - 921 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.148656.peg.1722 CDS NC_015571.1 1909109 1909498 2 + 390 FIG00935949: hypothetical protein - none -
fig|6666666.148656.peg.1723 CDS NC_015571.1 1910777 1909470 -2 - 1308 hypothetical protein - none -
fig|6666666.148656.peg.1724 CDS NC_015571.1 1911256 1910819 -1 - 438 putative periplasmic protein - none -
fig|6666666.148656.peg.1725 CDS NC_015571.1 1912662 1911379 -3 - 1284 sensor histidine kinase - none -
fig|6666666.148656.peg.1726 CDS NC_015571.1 1913348 1912659 -2 - 690 DNA-binding response regulator - none -
fig|6666666.148656.peg.1727 CDS NC_015571.1 1913580 1914188 3 + 609 NLP/P60 family protein - none -
fig|6666666.148656.peg.1728 CDS NC_015571.1 1914344 1914195 -2 - 150 hypothetical protein - none -
fig|6666666.148656.peg.1729 CDS NC_015571.1 1914574 1914422 -1 - 153 hypothetical protein - none -
fig|6666666.148656.peg.1730 CDS NC_015571.1 1914852 1916906 3 + 2055 prolyl oligopeptidase family protein - none -
fig|6666666.148656.peg.1731 CDS NC_015571.1 1916991 1917617 3 + 627 hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.148656.peg.1732 CDS NC_015571.1 1918073 1917684 -2 - 390 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148656.peg.1733 CDS NC_015571.1 1918264 1918070 -1 - 195 hypothetical protein - none -
fig|6666666.148656.peg.1734 CDS NC_015571.1 1919482 1918322 -1 - 1161 FIG00938859: hypothetical protein - none -
fig|6666666.148656.peg.1735 CDS NC_015571.1 1920499 1919507 -1 - 993 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.148656.peg.1736 CDS NC_015571.1 1921687 1920566 -1 - 1122 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.148656.peg.1737 CDS NC_015571.1 1922357 1921701 -2 - 657 FIG00938099: hypothetical protein - none -
fig|6666666.148656.peg.1738 CDS NC_015571.1 1922543 1922656 2 + 114 hypothetical protein - none -
fig|6666666.148656.peg.1739 CDS NC_015571.1 1922934 1923536 3 + 603 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.148656.peg.1740 CDS NC_015571.1 1923533 1924084 2 + 552 Nitroreductase family protein - none -
fig|6666666.148656.peg.1741 CDS NC_015571.1 1924143 1925357 3 + 1215 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.148656.peg.1742 CDS NC_015571.1 1925368 1925973 1 + 606 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.148656.peg.1743 CDS NC_015571.1 1926041 1926226 2 + 186 FIG00936045: hypothetical protein - none -
fig|6666666.148656.peg.1744 CDS NC_015571.1 1926223 1926675 1 + 453 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing
fig|6666666.148656.peg.1745 CDS NC_015571.1 1926708 1927622 3 + 915 Ribonuclease Z (EC 3.1.26.11) tRNA processing
fig|6666666.148656.peg.1746 CDS NC_015571.1 1927645 1928166 1 + 522 NLP/P60 family protein - none -
fig|6666666.148656.peg.1747 CDS NC_015571.1 1929799 1929035 -1 - 765 tRNA (guanosine(18)-2@1-O)-methyltransferase (EC 2.1.1.34) RNA methylation;
tRNA modification Bacteria
fig|6666666.148656.peg.1748 CDS NC_015571.1 1930282 1929884 -1 - 399 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions
fig|6666666.148656.peg.1749 CDS NC_015571.1 1931775 1930438 -3 - 1338 sensor histidine kinase - none -
fig|6666666.148656.peg.1750 CDS NC_015571.1 1933195 1931801 -1 - 1395 Two-component system response regulator - none -
fig|6666666.148656.peg.1751 CDS NC_015571.1 1933555 1933439 -1 - 117 hypothetical protein - none -
fig|6666666.148656.peg.1752 CDS NC_015571.1 1934602 1933847 -1 - 756 Glycosyl transferase, group 2 family protein - none -
fig|6666666.148656.peg.1753 CDS NC_015571.1 1934562 1934687 3 + 126 hypothetical protein - none -
fig|6666666.148656.peg.1754 CDS NC_015571.1 1935479 1934745 -2 - 735 PorT protein - none -
fig|6666666.148656.peg.1755 CDS NC_015571.1 1935669 1936268 3 + 600 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.148656.peg.1756 CDS NC_015571.1 1936252 1938159 1 + 1908 putative collagenase - none -
fig|6666666.148656.peg.1757 CDS NC_015571.1 1938799 1941261 1 + 2463 DNA topoisomerase I (EC 5.99.1.2) Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.148656.peg.1758 CDS NC_015571.1 1941265 1942023 1 + 759 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.148656.peg.1759 CDS NC_015571.1 1942623 1943105 3 + 483 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.1760 CDS NC_015571.1 1943162 1944574 2 + 1413 hypothetical protein - none -
fig|6666666.148656.peg.1761 CDS NC_015571.1 1945011 1945142 3 + 132 hypothetical protein - none -
fig|6666666.148656.peg.1762 CDS NC_015571.1 1946609 1945257 -2 - 1353 FIG00936650: hypothetical protein - none -
fig|6666666.148656.peg.1763 CDS NC_015571.1 1947306 1946659 -3 - 648 hypothetical protein - none -
fig|6666666.148656.peg.1764 CDS NC_015571.1 1949496 1947403 -3 - 2094 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.148656.peg.1765 CDS NC_015571.1 1951706 1949568 -2 - 2139 FIG00935638: hypothetical protein - none -
fig|6666666.148656.peg.1766 CDS NC_015571.1 1952246 1953742 2 + 1497 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.148656.peg.1767 CDS NC_015571.1 1956625 1954394 -1 - 2232 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.148656.peg.1768 CDS NC_015571.1 1959470 1956777 -2 - 2694 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.148656.peg.1769 CDS NC_015571.1 1960601 1959495 -2 - 1107 FIG00935657: hypothetical protein - none -
fig|6666666.148656.peg.1770 CDS NC_015571.1 1962890 1960773 -2 - 2118 fibronectin type III domain protein - none -
fig|6666666.148656.peg.1771 CDS NC_015571.1 1963345 1963467 1 + 123 hypothetical protein - none -
fig|6666666.148656.peg.1772 CDS NC_015571.1 1963666 1963800 1 + 135 hypothetical protein - none -
fig|6666666.148656.peg.1773 CDS NC_015571.1 1965089 1963845 -2 - 1245 FIG00936174: hypothetical protein - none -
fig|6666666.148656.peg.1774 CDS NC_015571.1 1965293 1965153 -2 - 141 hypothetical protein - none -
fig|6666666.148656.peg.1775 CDS NC_015571.1 1967308 1965587 -1 - 1722 Acyl-CoA dehydrogenase (EC 1.3.8.7) - none -
fig|6666666.148656.peg.1776 CDS NC_015571.1 1968339 1967320 -3 - 1020 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate;
Lysine fermentation
fig|6666666.148656.peg.1777 CDS NC_015571.1 1969214 1968348 -2 - 867 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate;
Lysine fermentation
fig|6666666.148656.peg.1778 CDS NC_015571.1 1970024 1969305 -2 - 720 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.148656.peg.1779 CDS NC_015571.1 1970728 1970255 -1 - 474 FIG00935740: hypothetical protein - none -
fig|6666666.148656.peg.1780 CDS NC_015571.1 1971358 1970744 -1 - 615 Biopolymer transport exbD protein. - none -
fig|6666666.148656.peg.1781 CDS NC_015571.1 1971864 1971394 -3 - 471 FIG00936036: hypothetical protein - none -
fig|6666666.148656.peg.1782 CDS NC_015571.1 1972685 1971873 -2 - 813 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.148656.peg.1783 CDS NC_015571.1 1973836 1973033 -1 - 804 Putative deoxyribonuclease YcfH YcfH
fig|6666666.148656.peg.1784 CDS NC_015571.1 1974884 1973907 -2 - 978 Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.148656.peg.1785 CDS NC_015571.1 1975748 1975056 -2 - 693 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.148656.peg.1786 CDS NC_015571.1 1975848 1975726 -3 - 123 hypothetical protein - none -
fig|6666666.148656.peg.1787 CDS NC_015571.1 1975985 1976101 2 + 117 FIG00935549: hypothetical protein - none -
fig|6666666.148656.peg.1788 CDS NC_015571.1 1978795 1976177 -1 - 2619 FIG00936488: hypothetical protein - none -
fig|6666666.148656.peg.1789 CDS NC_015571.1 1979552 1978836 -2 - 717 FIG00935912: hypothetical protein - none -
fig|6666666.148656.peg.1790 CDS NC_015571.1 1980717 1979533 -3 - 1185 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.148656.peg.1791 CDS NC_015571.1 1981311 1980727 -3 - 585 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.148656.peg.1792 CDS NC_015571.1 1981848 1981312 -3 - 537 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.148656.peg.1793 CDS NC_015571.1 1982442 1984439 3 + 1998 Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.148656.peg.1794 CDS NC_015571.1 1984595 1986949 2 + 2355 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.148656.peg.1795 CDS NC_015571.1 1986997 1987707 1 + 711 FIG005935: membrane protein - none -
fig|6666666.148656.peg.1796 CDS NC_015571.1 1990584 1987807 -3 - 2778 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.148656.peg.1797 CDS NC_015571.1 1990681 1990845 1 + 165 hypothetical protein - none -
fig|6666666.148656.peg.1798 CDS NC_015571.1 1993450 1991891 -1 - 1560 NAD-utilizing dehydrogenases - none -
fig|6666666.148656.peg.1799 CDS NC_015571.1 1994886 1993435 -3 - 1452 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.148656.peg.1800 CDS NC_015571.1 1995315 1995163 -3 - 153 Mobile element protein - none -
fig|6666666.148656.peg.1801 CDS NC_015571.1 1996941 1995592 -3 - 1350 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.148656.peg.1802 CDS NC_015571.1 1997737 1996946 -1 - 792 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) - none -
fig|6666666.148656.peg.1803 CDS NC_015571.1 1998987 1997776 -3 - 1212 Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26) - none -
fig|6666666.148656.peg.1804 CDS NC_015571.1 1999869 1999018 -3 - 852 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.148656.peg.1805 CDS NC_015571.1 2000811 1999906 -3 - 906 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.148656.peg.1806 CDS NC_015571.1 2001895 2000849 -1 - 1047 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.148656.peg.1807 CDS NC_015571.1 2001917 2002045 2 + 129 hypothetical protein - none -
fig|6666666.148656.peg.1808 CDS NC_015571.1 2009988 2002489 -3 - 7500 FIG00935527: hypothetical protein - none -
fig|6666666.148656.peg.1809 CDS NC_015571.1 2010636 2010028 -3 - 609 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.148656.peg.1810 CDS NC_015571.1 2011768 2011076 -1 - 693 Mobile element protein - none -
fig|6666666.148656.peg.1811 CDS NC_015571.1 2012309 2012896 2 + 588 Mobile element protein - none -
fig|6666666.148656.peg.1812 CDS NC_015571.1 2014111 2013026 -1 - 1086 Mobile element protein - none -
fig|6666666.148656.peg.1813 CDS NC_015571.1 2014468 2014752 1 + 285 Mobile element protein - none -
fig|6666666.148656.peg.1814 CDS NC_015571.1 2017365 2015029 -3 - 2337 Translation-disabling ACNase RloC - none -
fig|6666666.148656.peg.1815 CDS NC_015571.1 2018882 2017440 -2 - 1443 DNA METHYLASE-TYPE I RESTRICTION-MODIFICATION SYSTEM - none -
fig|6666666.148656.peg.1816 CDS NC_015571.1 2020405 2018876 -1 - 1530 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.148656.peg.1817 CDS NC_015571.1 2021430 2021702 3 + 273 FIG00938167: hypothetical protein - none -
fig|6666666.148656.peg.1818 CDS NC_015571.1 2021747 2022763 2 + 1017 FIG00938084: hypothetical protein - none -
fig|6666666.148656.peg.1819 CDS NC_015571.1 2022906 2023853 3 + 948 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.148656.peg.1820 CDS NC_015571.1 2023956 2024303 3 + 348 mobilization protein - none -
fig|6666666.148656.peg.1821 CDS NC_015571.1 2024300 2025226 2 + 927 mobilization protein - none -
fig|6666666.148656.peg.1822 CDS NC_015571.1 2025248 2025907 2 + 660 FIG00938846: hypothetical protein - none -
fig|6666666.148656.peg.1823 CDS NC_015571.1 2027154 2026045 -3 - 1110 hypothetical protein - none -
fig|6666666.148656.peg.1824 CDS NC_015571.1 2028499 2027231 -1 - 1269 FIG00937377: hypothetical protein - none -
fig|6666666.148656.peg.1825 CDS NC_015571.1 2029809 2028511 -3 - 1299 Integrase - none -
fig|6666666.148656.peg.1826 CDS NC_015571.1 2030290 2031582 1 + 1293 Transposase - none -
fig|6666666.148656.peg.1827 CDS NC_015571.1 2031579 2032034 3 + 456 FIG00938091: hypothetical protein - none -
fig|6666666.148656.peg.1828 CDS NC_015571.1 2032745 2033014 2 + 270 FIG00939304: hypothetical protein - none -
fig|6666666.148656.peg.1829 CDS NC_015571.1 2033035 2033340 1 + 306 excisionase family DNA binding protein - none -
fig|6666666.148656.peg.1830 CDS NC_015571.1 2033337 2033813 3 + 477 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1831 CDS NC_015571.1 2034005 2034430 2 + 426 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1832 CDS NC_015571.1 2035184 2034420 -2 - 765 Integrase/recombinase (XerC/CodV family) - none -
fig|6666666.148656.peg.1833 CDS NC_015571.1 2035156 2036586 1 + 1431 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.148656.peg.1834 CDS NC_015571.1 2038143 2036581 -3 - 1563 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.148656.peg.1835 CDS NC_015571.1 2038619 2038140 -2 - 480 death-on-curing family protein - none -
fig|6666666.148656.peg.1836 CDS NC_015571.1 2039628 2038612 -3 - 1017 CiaB PROTEIN - none -
fig|6666666.148656.peg.1837 CDS NC_015571.1 2041148 2039640 -2 - 1509 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.148656.peg.1838 CDS NC_015571.1 2043539 2041152 -2 - 2388 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.148656.peg.1839 CDS NC_015571.1 2043812 2043609 -2 - 204 transcriptional regulator, XRE family - none -
fig|6666666.148656.peg.1840 CDS NC_015571.1 2047485 2044072 -3 - 3414 putative DNA methylase - none -
fig|6666666.148656.peg.1841 CDS NC_015571.1 2049764 2047485 -2 - 2280 putative DNA methylase - none -
fig|6666666.148656.peg.1842 CDS NC_015571.1 2051863 2049770 -1 - 2094 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.148656.peg.1843 CDS NC_015571.1 2053361 2051952 -2 - 1410 FIG00936597: hypothetical protein - none -
fig|6666666.148656.peg.1844 CDS NC_015571.1 2054215 2055225 1 + 1011 Integrase - none -
fig|6666666.148656.peg.1845 CDS NC_015571.1 2055210 2056538 3 + 1329 hypothetical protein - none -
fig|6666666.148656.peg.1846 CDS NC_015571.1 2056551 2058896 3 + 2346 putative TonB-dependent receptor - none -
fig|6666666.148656.peg.1847 CDS NC_015571.1 2058954 2061140 3 + 2187 ABC transporter ATP-binding protein - none -
fig|6666666.148656.peg.1848 CDS NC_015571.1 2064149 2062680 -2 - 1470 putative TonB-dependent receptor - none -
fig|6666666.148656.peg.1849 CDS NC_015571.1 2065582 2064182 -1 - 1401 Arylsulfatase regulator (Fe-S oxidoreductase) - none -
fig|6666666.148656.peg.1850 CDS NC_015571.1 2066507 2066650 2 + 144 ISPg6, transposase - none -
fig|6666666.148656.peg.1851 CDS NC_015571.1 2067041 2067304 2 + 264 ISPg6, transposase - none -
fig|6666666.148656.peg.1852 CDS NC_015571.1 2067328 2067528 1 + 201 ISPg6, transposase - none -
fig|6666666.148656.peg.1853 CDS NC_015571.1 2069577 2067592 -3 - 1986 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1854 CDS NC_015571.1 2070820 2069579 -1 - 1242 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1855 CDS NC_015571.1 2071245 2070844 -3 - 402 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1856 CDS NC_015571.1 2071876 2072685 1 + 810 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1857 CDS NC_015571.1 2072672 2073058 2 + 387 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1858 CDS NC_015571.1 2073063 2073767 3 + 705 hypothetical protein - none -
fig|6666666.148656.peg.1859 CDS NC_015571.1 2073974 2074258 2 + 285 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1860 CDS NC_015571.1 2074262 2074597 2 + 336 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1861 CDS NC_015571.1 2074594 2077119 1 + 2526 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1862 CDS NC_015571.1 2077147 2077776 1 + 630 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1863 CDS NC_015571.1 2077899 2078939 3 + 1041 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1864 CDS NC_015571.1 2078951 2079574 2 + 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1865 CDS NC_015571.1 2079571 2079858 1 + 288 FIG00935654: hypothetical protein - none -
fig|6666666.148656.peg.1866 CDS NC_015571.1 2079848 2081209 2 + 1362 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1867 CDS NC_015571.1 2081232 2082257 3 + 1026 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1868 CDS NC_015571.1 2082257 2082829 2 + 573 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1869 CDS NC_015571.1 2082839 2083306 2 + 468 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1870 CDS NC_015571.1 2083583 2083801 2 + 219 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.148656.peg.1871 CDS NC_015571.1 2083823 2084908 2 + 1086 Mobile element protein - none -
fig|6666666.148656.peg.1872 CDS NC_015571.1 2085082 2085459 1 + 378 Integrase - none -
fig|6666666.148656.peg.1873 CDS NC_015571.1 2086245 2088257 3 + 2013 hypothetical protein - none -
fig|6666666.148656.peg.1874 CDS NC_015571.1 2088845 2089963 2 + 1119 hypothetical protein - none -
fig|6666666.148656.peg.1875 CDS NC_015571.1 2089964 2091268 2 + 1305 modification methylase, putative - none -
fig|6666666.148656.peg.1876 CDS NC_015571.1 2091770 2092849 2 + 1080 Mobile element protein - none -
fig|6666666.148656.peg.1877 CDS NC_015571.1 2092863 2093474 3 + 612 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.148656.peg.1878 CDS NC_015571.1 2094152 2093505 -2 - 648 FIG00936531: hypothetical protein - none -
fig|6666666.148656.peg.1879 CDS NC_015571.1 2094654 2094187 -3 - 468 Membrane-flanked domain - none -
fig|6666666.148656.peg.1880 CDS NC_015571.1 2096111 2094759 -2 - 1353 IS1478 transposase - none -
fig|6666666.148656.peg.1881 CDS NC_015571.1 2096773 2096225 -1 - 549 Putative membrane protein - none -
fig|6666666.148656.peg.1882 CDS NC_015571.1 2097392 2096778 -2 - 615 methlytransferase, UbiE/COQ5 family - none -
fig|6666666.148656.peg.1883 CDS NC_015571.1 2097979 2097407 -1 - 573 FIG00939884: hypothetical protein - none -
fig|6666666.148656.peg.1884 CDS NC_015571.1 2098620 2097976 -3 - 645 hypothetical protein - none -
fig|6666666.148656.peg.1885 CDS NC_015571.1 2099219 2099061 -2 - 159 hypothetical protein - none -
fig|6666666.148656.peg.1886 CDS NC_015571.1 2099513 2099232 -2 - 282 FIG00935685: hypothetical protein - none -
fig|6666666.148656.peg.1887 CDS NC_015571.1 2099763 2099536 -3 - 228 hypothetical protein - none -
fig|6666666.148656.peg.1888 CDS NC_015571.1 2100297 2099776 -3 - 522 FIG00936328: hypothetical protein - none -
fig|6666666.148656.peg.1889 CDS NC_015571.1 2100576 2100304 -3 - 273 FIG00935850: hypothetical protein - none -
fig|6666666.148656.peg.1890 CDS NC_015571.1 2100773 2100916 2 + 144 hypothetical protein - none -
fig|6666666.148656.peg.1891 CDS NC_015571.1 2100904 2101041 1 + 138 hypothetical protein - none -
fig|6666666.148656.peg.1892 CDS NC_015571.1 2101479 2101021 -3 - 459 FIG00935622: hypothetical protein - none -
fig|6666666.148656.peg.1893 CDS NC_015571.1 2102039 2101506 -2 - 534 FIG00936134: hypothetical protein - none -
fig|6666666.148656.peg.1894 CDS NC_015571.1 2103307 2102075 -1 - 1233 transposase - none -
fig|6666666.148656.peg.1895 CDS NC_015571.1 2104588 2103920 -1 - 669 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.148656.peg.1896 CDS NC_015571.1 2104779 2104585 -3 - 195 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.148656.peg.1897 CDS NC_015571.1 2105168 2106976 2 + 1809 sensor histidine kinase - none -
fig|6666666.148656.peg.1898 CDS NC_015571.1 2106989 2107672 2 + 684 DNA-binding response regulator, LuxR family - none -
fig|6666666.148656.peg.1899 CDS NC_015571.1 2107858 2108544 1 + 687 FIG00936184: hypothetical protein - none -
fig|6666666.148656.peg.1900 CDS NC_015571.1 2108636 2109121 2 + 486 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.148656.peg.1901 CDS NC_015571.1 2109262 2111793 1 + 2532 FIG00935743: hypothetical protein - none -
fig|6666666.148656.peg.1902 CDS NC_015571.1 2112919 2114589 1 + 1671 Peptidylarginine deiminase precursor (EC 3.5.3.-) - none -
fig|6666666.148656.peg.1903 CDS NC_015571.1 2114814 2116346 3 + 1533 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.148656.peg.1904 CDS NC_015571.1 2116731 2116868 3 + 138 hypothetical protein - none -
fig|6666666.148656.peg.1905 CDS NC_015571.1 2119097 2117289 -2 - 1809 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.148656.peg.1906 CDS NC_015571.1 2120827 2119220 -1 - 1608 Fumarate hydratase class I (EC 4.2.1.2) TCA Cycle
fig|6666666.148656.peg.1907 CDS NC_015571.1 2121010 2121153 1 + 144 hypothetical protein - none -
fig|6666666.148656.peg.1908 CDS NC_015571.1 2122103 2121162 -2 - 942 Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.148656.peg.1909 CDS NC_015571.1 2125139 2122536 -2 - 2604 Thiamin-regulated outer membrane receptor Omr1 Thiamin biosynthesis
fig|6666666.148656.peg.1910 CDS NC_015571.1 2127046 2128731 1 + 1686 Predicted cobalt transporter in Bacteroides_Porphyromonas Coenzyme B12 biosynthesis
fig|6666666.148656.peg.1911 CDS NC_015571.1 2128821 2129339 3 + 519 FIG00935651: hypothetical protein - none -
fig|6666666.148656.peg.1912 CDS NC_015571.1 2130301 2129336 -1 - 966 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.148656.peg.1913 CDS NC_015571.1 2130459 2131100 3 + 642 nitroimidazole resistance protein, putative - none -
fig|6666666.148656.peg.1914 CDS NC_015571.1 2131238 2131402 2 + 165 hypothetical protein - none -
fig|6666666.148656.peg.1915 CDS NC_015571.1 2131411 2131548 1 + 138 Mobile element protein - none -
fig|6666666.148656.peg.1916 CDS NC_015571.1 2131799 2134420 2 + 2622 Organic solvent tolerance protein precursor ECSIG4-SIG7
fig|6666666.148656.peg.1917 CDS NC_015571.1 2134447 2135169 1 + 723 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.148656.peg.1918 CDS NC_015571.1 2135153 2136067 2 + 915 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.148656.peg.1919 CDS NC_015571.1 2136064 2137209 1 + 1146 AP endonuclease domain protein - none -
fig|6666666.148656.peg.1920 CDS NC_015571.1 2137462 2138841 1 + 1380 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.148656.peg.1921 CDS NC_015571.1 2139275 2139096 -2 - 180 Mobile element protein - none -
fig|6666666.148656.peg.1922 CDS NC_015571.1 2139920 2141005 2 + 1086 Mobile element protein - none -
fig|6666666.148656.peg.1923 CDS NC_015571.1 2141919 2143445 3 + 1527 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.148656.peg.1924 CDS NC_015571.1 2143548 2144567 3 + 1020 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster
fig|6666666.148656.peg.1925 CDS NC_015571.1 2144604 2145491 3 + 888 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.148656.peg.1926 CDS NC_015571.1 2145491 2146009 2 + 519 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.148656.peg.1927 CDS NC_015571.1 2146002 2147867 3 + 1866 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
Bacterial cell division cluster;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.148656.peg.1928 CDS NC_015571.1 2147857 2149314 1 + 1458 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Bacterial cell division cluster;
Peptidoglycan Biosynthesis
fig|6666666.148656.peg.1929 CDS NC_015571.1 2150553 2149342 -3 - 1212 FIG00936610: hypothetical protein - none -
fig|6666666.148656.peg.1930 CDS NC_015571.1 2150878 2150994 1 + 117 hypothetical protein - none -
fig|6666666.148656.peg.1931 CDS NC_015571.1 2151006 2151449 3 + 444 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.1932 CDS NC_015571.1 2151514 2152224 1 + 711 FIG00936004: hypothetical protein - none -
fig|6666666.148656.peg.1933 CDS NC_015571.1 2152261 2153187 1 + 927 Chromosome segregation ATPases - none -
fig|6666666.148656.peg.1934 CDS NC_015571.1 2153420 2155951 2 + 2532 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.148656.peg.1935 CDS NC_015571.1 2155985 2157187 2 + 1203 FIG00935679: hypothetical protein - none -
fig|6666666.148656.peg.1936 CDS NC_015571.1 2157914 2160676 2 + 2763 helicase (Snf2/Rad54 family) - none -
fig|6666666.148656.peg.1937 CDS NC_015571.1 2160691 2162418 1 + 1728 ATP-dependent DNA helicase - none -
fig|6666666.148656.peg.1938 CDS NC_015571.1 2162408 2162860 2 + 453 hypothetical protein - none -
fig|6666666.148656.peg.1939 CDS NC_015571.1 2162935 2164647 1 + 1713 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.148656.peg.1940 CDS NC_015571.1 2164640 2167381 2 + 2742 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.148656.peg.1941 CDS NC_015571.1 2168111 2167458 -2 - 654 amino acid exporter, putative - none -
fig|6666666.148656.peg.1942 CDS NC_015571.1 2169434 2168295 -2 - 1140 FIG00935497: hypothetical protein - none -
fig|6666666.148656.peg.1943 CDS NC_015571.1 2170143 2169394 -3 - 750 ABC transporter, permease protein - none -
fig|6666666.148656.peg.1944 CDS NC_015571.1 2170838 2170140 -2 - 699 Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB Alkanesulfonates Utilization
fig|6666666.148656.peg.1945 CDS NC_015571.1 2171828 2170890 -2 - 939 thiamine biosynthesis protein, putative - none -
fig|6666666.148656.peg.1946 CDS NC_015571.1 2171955 2173100 3 + 1146 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.148656.peg.1947 CDS NC_015571.1 2173142 2173261 2 + 120 hypothetical protein - none -
fig|6666666.148656.peg.1948 CDS NC_015571.1 2174278 2175564 1 + 1287 surface antigen, putative - none -
fig|6666666.148656.peg.1949 CDS NC_015571.1 2176102 2175911 -1 - 192 hypothetical protein - none -
fig|6666666.148656.peg.1950 CDS NC_015571.1 2176089 2177507 3 + 1419 FIG00935908: hypothetical protein - none -
fig|6666666.148656.peg.1951 CDS NC_015571.1 2177578 2178456 1 + 879 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.148656.peg.1952 CDS NC_015571.1 2178579 2180315 3 + 1737 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.148656.peg.1953 CDS NC_015571.1 2180401 2181405 1 + 1005 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) - none -
fig|6666666.148656.peg.1954 CDS NC_015571.1 2181438 2182775 3 + 1338 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.148656.peg.1955 CDS NC_015571.1 2182795 2183397 1 + 603 FIG00936255: hypothetical protein - none -
fig|6666666.148656.peg.1956 CDS NC_015571.1 2183428 2184732 1 + 1305 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.148656.peg.1957 CDS NC_015571.1 2184739 2185266 1 + 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.148656.peg.1958 CDS NC_015571.1 2185263 2186420 3 + 1158 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.148656.peg.1959 CDS NC_015571.1 2186840 2186433 -2 - 408 Mobile element protein - none -
fig|6666666.148656.peg.1960 CDS NC_015571.1 2187130 2188560 1 + 1431 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.148656.peg.1961 CDS NC_015571.1 2188592 2190790 2 + 2199 Dipeptidyl peptidase IV - none -
fig|6666666.148656.peg.1962 CDS NC_015571.1 2190787 2192082 1 + 1296 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.148656.peg.1963 CDS NC_015571.1 2192148 2193056 3 + 909 FIG00936584: hypothetical protein - none -
fig|6666666.148656.peg.1964 CDS NC_015571.1 2194241 2194363 2 + 123 hypothetical protein - none -
fig|6666666.148656.peg.1965 CDS NC_015571.1 2194522 2194665 1 + 144 hypothetical protein - none -
fig|6666666.148656.peg.1966 CDS NC_015571.1 2194916 2195317 2 + 402 FIG00935521: hypothetical protein - none -
fig|6666666.148656.peg.1967 CDS NC_015571.1 2195450 2195322 -2 - 129 hypothetical protein - none -
fig|6666666.148656.peg.1968 CDS NC_015571.1 2195455 2195916 1 + 462 Acyltransferase family protein - none -
fig|6666666.148656.peg.1969 CDS NC_015571.1 2195913 2196734 3 + 822 FIG003879: Predicted amidohydrolase CBSS-354.1.peg.2917
fig|6666666.148656.peg.1970 CDS NC_015571.1 2196845 2197477 2 + 633 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.148656.peg.1971 CDS NC_015571.1 2197528 2197941 1 + 414 hypothetical protein - none -
fig|6666666.148656.peg.1972 CDS NC_015571.1 2197976 2198440 2 + 465 FIG00935776: hypothetical protein - none -
fig|6666666.148656.peg.1973 CDS NC_015571.1 2198686 2198847 1 + 162 Mobile element protein - none -
fig|6666666.148656.peg.1974 CDS NC_015571.1 2199709 2198813 -1 - 897 Transcription regulator [contains diacylglycerol kinase catalytic domain] - none -
fig|6666666.148656.peg.1975 CDS NC_015571.1 2200201 2199737 -1 - 465 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.148656.peg.1976 CDS NC_015571.1 2201609 2200338 -2 - 1272 Glycosyl transferase, group 1 family protein - none -
fig|6666666.148656.peg.1977 CDS NC_015571.1 2202727 2201606 -1 - 1122 glycosyl transferase, group 1 family protein - none -
fig|6666666.148656.peg.1978 CDS NC_015571.1 2202920 2203057 2 + 138 Conjugative transposon protein TraP @ DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.148656.peg.1979 CDS NC_015571.1 2204688 2203210 -3 - 1479 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.148656.peg.1980 CDS NC_015571.1 2205732 2204716 -3 - 1017 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.148656.peg.1981 CDS NC_015571.1 2206286 2205732 -2 - 555 FIG00935832: hypothetical protein - none -
fig|6666666.148656.peg.1982 CDS NC_015571.1 2206519 2208069 1 + 1551 L-lactate permease Lactate utilization
fig|6666666.148656.peg.1983 CDS NC_015571.1 2209948 2208650 -1 - 1299 Error-prone, lesion bypass DNA polymerase V (UmuC) - none -
fig|6666666.148656.peg.1984 CDS NC_015571.1 2210381 2209956 -2 - 426 Error-prone repair protein UmuD - none -
fig|6666666.148656.peg.1985 CDS NC_015571.1 2210876 2210694 -2 - 183 FIG00936059: hypothetical protein - none -
fig|6666666.148656.peg.1986 CDS NC_015571.1 2210850 2210975 3 + 126 hypothetical protein - none -
fig|6666666.148656.peg.1987 CDS NC_015571.1 2211373 2211813 1 + 441 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.148656.peg.1988 CDS NC_015571.1 2211841 2212821 1 + 981 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.148656.peg.1989 CDS NC_015571.1 2212818 2214017 3 + 1200 FIG00935909: hypothetical protein - none -
fig|6666666.148656.peg.1990 CDS NC_015571.1 2216151 2214163 -3 - 1989 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.148656.peg.1991 CDS NC_015571.1 2216462 2216148 -2 - 315 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.148656.peg.1992 CDS NC_015571.1 2217733 2216576 -1 - 1158 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.148656.peg.1993 CDS NC_015571.1 2218531 2218112 -1 - 420 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.148656.peg.1994 CDS NC_015571.1 2219488 2221644 1 + 2157 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.148656.peg.1995 CDS NC_015571.1 2221687 2222997 1 + 1311 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.148656.peg.1996 CDS NC_015571.1 2223099 2223659 3 + 561 FIG00935611: hypothetical protein - none -
fig|6666666.148656.peg.1997 CDS NC_015571.1 2223667 2224236 1 + 570 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.148656.peg.1998 CDS NC_015571.1 2225618 2224284 -2 - 1335 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.148656.peg.1999 CDS NC_015571.1 2225775 2227442 3 + 1668 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.148656.peg.2000 CDS NC_015571.1 2228297 2227722 -2 - 576 Mobile element protein - none -
fig|6666666.148656.peg.2001 CDS NC_015571.1 2229332 2229898 2 + 567 RNA polymerase ECF-type sigma factor - none -
fig|6666666.148656.peg.2002 CDS NC_015571.1 2229946 2230356 1 + 411 FIG00935919: hypothetical protein - none -
fig|6666666.148656.peg.2003 CDS NC_015571.1 2230353 2230859 3 + 507 hypothetical protein - none -
fig|6666666.148656.peg.2004 CDS NC_015571.1 2230934 2231482 2 + 549 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.148656.peg.2005 CDS NC_015571.1 2231632 2232738 1 + 1107 Chorismate synthase (EC 4.2.3.5) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.148656.peg.2006 CDS NC_015571.1 2234781 2233111 -3 - 1671 Probable dipeptidase (EC 3.4.-.-) - none -
fig|6666666.148656.peg.2007 CDS NC_015571.1 2235528 2235674 3 + 147 hypothetical protein - none -
fig|6666666.148656.peg.2008 CDS NC_015571.1 2236864 2235734 -1 - 1131 capA protein, putative - none -
fig|6666666.148656.peg.2009 CDS NC_015571.1 2237369 2236875 -2 - 495 FIG00936260: hypothetical protein - none -
fig|6666666.148656.peg.2010 CDS NC_015571.1 2238075 2237404 -3 - 672 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148656.peg.2011 CDS NC_015571.1 2238502 2239317 1 + 816 FIG00936355: hypothetical protein - none -
fig|6666666.148656.peg.2012 CDS NC_015571.1 2239342 2240016 1 + 675 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.148656.peg.2013 CDS NC_015571.1 2240013 2240657 3 + 645 Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis Glutathione: Non-redox reactions
fig|6666666.148656.peg.2014 CDS NC_015571.1 2240662 2243529 1 + 2868 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.148656.peg.2015 CDS NC_015571.1 2243726 2245066 2 + 1341 FIG00935697: hypothetical protein - none -
fig|6666666.148656.peg.2016 CDS NC_015571.1 2246498 2245083 -2 - 1416 RecD-like DNA helicase Atu2026 - none -
fig|6666666.148656.peg.2017 CDS NC_015571.1 2246630 2247262 2 + 633 FIG036016: hypothetical protein CBSS-226186.1.peg.3978
fig|6666666.148656.peg.2018 CDS NC_015571.1 2247280 2248095 1 + 816 FIG032012: hypothetical protein CBSS-226186.1.peg.3978
fig|6666666.148656.peg.2019 CDS NC_015571.1 2248132 2248671 1 + 540 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) ## SSU rRNA m(2)G966 CBSS-226186.1.peg.3978;
CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.148656.peg.2020 CDS NC_015571.1 2248868 2249017 2 + 150 hypothetical protein - none -
fig|6666666.148656.peg.2021 CDS NC_015571.1 2249314 2249168 -1 - 147 hypothetical protein - none -
fig|6666666.148656.peg.2022 CDS NC_015571.1 2251320 2249521 -3 - 1800 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.148656.peg.2023 CDS NC_015571.1 2252263 2251916 -1 - 348 FIG00936104: hypothetical protein - none -
fig|6666666.148656.peg.2024 CDS NC_015571.1 2252564 2252379 -2 - 186 hypothetical protein - none -
fig|6666666.148656.peg.2025 CDS NC_015571.1 2255031 2252584 -3 - 2448 Ferrous iron transport protein B - none -
fig|6666666.148656.peg.2026 CDS NC_015571.1 2255869 2257590 1 + 1722 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes - none -
fig|6666666.148656.peg.2027 CDS NC_015571.1 2258737 2257718 -1 - 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.148656.peg.2028 CDS NC_015571.1 2259949 2258876 -1 - 1074 GDP-L-fucose synthetase (EC 1.1.1.271) - none -
fig|6666666.148656.peg.2029 CDS NC_015571.1 2261039 2259942 -2 - 1098 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) - none -
fig|6666666.148656.peg.2030 CDS NC_015571.1 2261539 2262021 1 + 483 Ferritin-like protein 2 Iron-sulfur cluster assembly
fig|6666666.148656.peg.2031 CDS NC_015571.1 2264117 2262129 -2 - 1989 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) - none -
fig|6666666.148656.peg.2032 CDS NC_015571.1 2264095 2264238 1 + 144 hypothetical protein - none -
fig|6666666.148656.peg.2033 CDS NC_015571.1 2266437 2264275 -3 - 2163 FIG00936660: hypothetical protein - none -
fig|6666666.148656.peg.2034 CDS NC_015571.1 2266955 2266500 -2 - 456 FIG00936338: hypothetical protein - none -
fig|6666666.148656.peg.2035 CDS NC_015571.1 2268103 2266979 -1 - 1125 FIG00936554: hypothetical protein - none -
fig|6666666.148656.peg.2036 CDS NC_015571.1 2269516 2268269 -1 - 1248 FIG008208: hypothetical protein - none -
fig|6666666.148656.peg.2037 CDS NC_015571.1 2270455 2269535 -1 - 921 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.148656.peg.2038 CDS NC_015571.1 2271638 2270556 -2 - 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.148656.peg.2039 CDS NC_015571.1 2273312 2271972 -2 - 1341 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.148656.peg.2040 CDS NC_015571.1 2274045 2273503 -3 - 543 DNA-binding protein, histone-like family - none -
fig|6666666.148656.peg.2041 CDS NC_015571.1 2275147 2274581 -1 - 567 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.148656.peg.2042 CDS NC_015571.1 2275203 2275358 3 + 156 FIG00936161: hypothetical protein - none -
fig|6666666.148656.peg.2043 CDS NC_015571.1 2275597 2276826 1 + 1230 Ornithine aminotransferase (EC 2.6.1.13) Dimethylarginine metabolism
fig|6666666.148656.peg.2044 CDS NC_015571.1 2276833 2277762 1 + 930 FIG00936429: hypothetical protein - none -
fig|6666666.148656.peg.2045 CDS NC_015571.1 2277839 2279470 2 + 1632 Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) - none -
fig|6666666.148656.peg.2046 CDS NC_015571.1 2279987 2279697 -2 - 291 hypothetical protein - none -
fig|6666666.148656.peg.2047 CDS NC_015571.1 2280217 2280104 -1 - 114 hypothetical protein - none -
fig|6666666.148656.peg.2048 CDS NC_015571.1 2281858 2282019 1 + 162 hypothetical protein - none -
fig|6666666.148656.peg.2049 CDS NC_015571.1 2289092 2285868 -2 - 3225 UvrD/REP helicase domain protein - none -
fig|6666666.148656.peg.2050 CDS NC_015571.1 2289949 2289089 -1 - 861 Putative hemolysin - none -
fig|6666666.148656.peg.2051 CDS NC_015571.1 2290920 2289994 -3 - 927 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.148656.peg.2052 CDS NC_015571.1 2291663 2290932 -2 - 732 oxidoreductase, short chain dehydrogenase/reductase family - none -
fig|6666666.148656.peg.2053 CDS NC_015571.1 2292127 2291669 -1 - 459 Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39) Rhamnose containing glycans
fig|6666666.148656.peg.2054 CDS NC_015571.1 2293246 2292149 -1 - 1098 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) ECSIG4-SIG7;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.148656.peg.2055 CDS NC_015571.1 2294345 2293290 -2 - 1056 FIG00936241: hypothetical protein - none -
fig|6666666.148656.peg.2056 CDS NC_015571.1 2295494 2294436 -2 - 1059 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.148656.peg.2057 CDS NC_015571.1 2295686 2295507 -2 - 180 FIG00935767: hypothetical protein - none -
fig|6666666.148656.peg.2058 CDS NC_015571.1 2297489 2296125 -2 - 1365 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.148656.peg.2059 CDS NC_015571.1 2298038 2297550 -2 - 489 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.148656.peg.2060 CDS NC_015571.1 2298887 2298084 -2 - 804 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.148656.peg.2061 CDS NC_015571.1 2299111 2299908 1 + 798 Zn-dependent protease with chaperone function PA4632 - none -
fig|6666666.148656.peg.2062 CDS NC_015571.1 2300119 2301000 1 + 882 FIG00936452: hypothetical protein - none -
fig|6666666.148656.peg.2063 CDS NC_015571.1 2303179 2301242 -1 - 1938 ABC transporter ATP-binding protein - none -
fig|6666666.148656.peg.2064 CDS NC_015571.1 2305263 2303176 -3 - 2088 TPR repeat precursor - none -
fig|6666666.148656.peg.2065 CDS NC_015571.1 2305976 2305299 -2 - 678 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.148656.peg.2066 CDS NC_015571.1 2306611 2305973 -1 - 639 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.148656.peg.2067 CDS NC_015571.1 2306682 2306813 3 + 132 hypothetical protein - none -
fig|6666666.148656.peg.2068 CDS NC_015571.1 2306887 2312613 1 + 5727 FIG00936309: hypothetical protein - none -
fig|6666666.148656.peg.2069 CDS NC_015571.1 2312567 2313571 2 + 1005 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.148656.peg.2070 CDS NC_015571.1 2315323 2313707 -1 - 1617 ABC transporter, ATP-binding protein - none -
fig|6666666.148656.peg.2071 CDS NC_015571.1 2316618 2315599 -3 - 1020 FIG00936097: hypothetical protein - none -
fig|6666666.148656.peg.2072 CDS NC_015571.1 2316953 2316789 -2 - 165 Integral membrane protein - none -
fig|6666666.148656.peg.2073 CDS NC_015571.1 2317386 2317132 -3 - 255 Transglycosylase-associated protein - none -
fig|6666666.148656.peg.2074 CDS NC_015571.1 2320268 2317410 -2 - 2859 Excinuclease ABC subunit A paralog in greater Bacteroides group DNA repair, UvrABC system
fig|6666666.148656.peg.2075 CDS NC_015571.1 2321490 2321308 -3 - 183 nitrite reductase-related protein - none -
fig|6666666.148656.peg.2076 CDS NC_015571.1 2322933 2321761 -3 - 1173 FIG00936138: hypothetical protein - none -
fig|6666666.148656.peg.2077 CDS NC_015571.1 2324155 2323070 -1 - 1086 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) Mannose Metabolism
fig|6666666.148656.peg.2078 CDS NC_015571.1 2324520 2325947 3 + 1428 FIG00936576: hypothetical protein - none -
fig|6666666.148656.peg.2079 CDS NC_015571.1 2326138 2325944 -1 - 195 hypothetical protein - none -
fig|6666666.148656.peg.2080 CDS NC_015571.1 2326120 2328024 1 + 1905 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.148656.peg.2081 CDS NC_015571.1 2328078 2329418 3 + 1341 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.148656.peg.2082 CDS NC_015571.1 2329445 2330908 2 + 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.148656.peg.2083 CDS NC_015571.1 2331439 2331729 1 + 291 Mobile element protein - none -
fig|6666666.148656.peg.2084 CDS NC_015571.1 2331977 2333320 2 + 1344 tRNA-t(6)A37 methylthiotransferase Heat shock dnaK gene cluster extended;
Methylthiotransferases
fig|6666666.148656.peg.2085 CDS NC_015571.1 2333317 2334234 1 + 918 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.148656.peg.2086 CDS NC_015571.1 2334231 2335241 3 + 1011 Glycosyltransferase - none -
fig|6666666.148656.peg.2087 CDS NC_015571.1 2335303 2335980 1 + 678 FIG00936093: hypothetical protein - none -
fig|6666666.148656.peg.2088 CDS NC_015571.1 2335973 2336269 2 + 297 FIG00935478: hypothetical protein - none -
fig|6666666.148656.peg.2089 CDS NC_015571.1 2336406 2338571 3 + 2166 FIG00935975: hypothetical protein - none -
fig|6666666.148656.peg.2090 CDS NC_015571.1 2338568 2339224 2 + 657 FIG00935981: hypothetical protein - none -
fig|6666666.148656.rna.1 RNA NC_015571.1 6679 6606 -1 - 74 tRNA-Asn-GTT - none -
fig|6666666.148656.rna.2 RNA NC_015571.1 6775 6702 -1 - 74 tRNA-Asn-GTT - none -
fig|6666666.148656.rna.3 RNA NC_015571.1 32605 32675 1 + 71 tRNA-Gln-TTG - none -
fig|6666666.148656.rna.4 RNA NC_015571.1 86534 86606 2 + 73 tRNA-Lys-TTT - none -
fig|6666666.148656.rna.5 RNA NC_015571.1 315231 315158 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.148656.rna.6 RNA NC_015571.1 349135 349063 -1 - 73 tRNA-Lys-CTT - none -
fig|6666666.148656.rna.7 RNA NC_015571.1 404399 405873 2 + 1475 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.148656.rna.8 RNA NC_015571.1 406427 406500 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.148656.rna.9 RNA NC_015571.1 406502 406575 2 + 74 tRNA-Ala-TGC - none -
fig|6666666.148656.rna.10 RNA NC_015571.1 406693 409531 1 + 2839 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.148656.rna.11 RNA NC_015571.1 409675 409785 1 + 111 5S RNA - none -
fig|6666666.148656.rna.12 RNA NC_015571.1 602433 602362 -3 - 72 tRNA-Glu-TTC - none -
fig|6666666.148656.rna.13 RNA NC_015571.1 602853 602782 -3 - 72 tRNA-Glu-TTC - none -
fig|6666666.148656.rna.14 RNA NC_015571.1 657782 659256 2 + 1475 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.148656.rna.15 RNA NC_015571.1 659811 659884 3 + 74 tRNA-Ile-GAT - none -
fig|6666666.148656.rna.16 RNA NC_015571.1 659886 659959 3 + 74 tRNA-Ala-TGC - none -
fig|6666666.148656.rna.17 RNA NC_015571.1 660077 662915 2 + 2839 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.148656.rna.18 RNA NC_015571.1 663059 663169 2 + 111 5S RNA - none -
fig|6666666.148656.rna.19 RNA NC_015571.1 751266 751195 -3 - 72 tRNA-His-GTG - none -
fig|6666666.148656.rna.20 RNA NC_015571.1 795565 795492 -1 - 74 tRNA-Arg-TCT - none -
fig|6666666.148656.rna.21 RNA NC_015571.1 856792 856865 1 + 74 tRNA-Met-CAT - none -
fig|6666666.148656.rna.22 RNA NC_015571.1 879193 879120 -1 - 74 tRNA-Ala-GGC tRNAs
fig|6666666.148656.rna.23 RNA NC_015571.1 927991 928072 1 + 82 tRNA-Leu-TAG - none -
fig|6666666.148656.rna.24 RNA NC_015571.1 939283 939355 1 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.148656.rna.25 RNA NC_015571.1 1011342 1011415 3 + 74 tRNA-Thr-TGT - none -
fig|6666666.148656.rna.26 RNA NC_015571.1 1114207 1114135 -1 - 73 tRNA-Thr-CGT - none -
fig|6666666.148656.rna.27 RNA NC_015571.1 1150451 1150524 2 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.148656.rna.28 RNA NC_015571.1 1150560 1150633 3 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.148656.rna.29 RNA NC_015571.1 1247678 1247608 -2 - 71 tRNA-Gln-CTG - none -
fig|6666666.148656.rna.30 RNA NC_015571.1 1257886 1257960 1 + 75 tRNA-Pro-GGG tRNAs
fig|6666666.148656.rna.31 RNA NC_015571.1 1273759 1273649 -1 - 111 5S RNA - none -
fig|6666666.148656.rna.32 RNA NC_015571.1 1276741 1273903 -1 - 2839 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.148656.rna.33 RNA NC_015571.1 1276932 1276859 -3 - 74 tRNA-Ala-TGC - none -
fig|6666666.148656.rna.34 RNA NC_015571.1 1277007 1276934 -3 - 74 tRNA-Ile-GAT - none -
fig|6666666.148656.rna.35 RNA NC_015571.1 1279038 1277562 -3 - 1477 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.148656.rna.36 RNA NC_015571.1 1288146 1288075 -3 - 72 tRNA-Met-CAT - none -
fig|6666666.148656.rna.37 RNA NC_015571.1 1309651 1309579 -1 - 73 tRNA-Pro-CGG tRNAs
fig|6666666.148656.rna.38 RNA NC_015571.1 1354583 1354510 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.148656.rna.39 RNA NC_015571.1 1395808 1395734 -1 - 75 tRNA-Val-TAC - none -
fig|6666666.148656.rna.40 RNA NC_015571.1 1395925 1395851 -1 - 75 tRNA-Val-TAC - none -
fig|6666666.148656.rna.41 RNA NC_015571.1 1557739 1557821 1 + 83 tRNA-Tyr-GTA - none -
fig|6666666.148656.rna.42 RNA NC_015571.1 1557854 1557925 2 + 72 tRNA-Thr-GGT - none -
fig|6666666.148656.rna.43 RNA NC_015571.1 1559251 1559323 1 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.148656.rna.44 RNA NC_015571.1 1703636 1703550 -2 - 87 tRNA-Pseudo-GCT - none -
fig|6666666.148656.rna.45 RNA NC_015571.1 1722660 1722742 3 + 83 tRNA-Tyr-GTA - none -
fig|6666666.148656.rna.46 RNA NC_015571.1 1722776 1722848 2 + 73 tRNA-Gly-TCC - none -
fig|6666666.148656.rna.47 RNA NC_015571.1 1722865 1722949 1 + 85 tRNA-Leu-TAA - none -
fig|6666666.148656.rna.48 RNA NC_015571.1 1722998 1723070 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.148656.rna.49 RNA NC_015571.1 1843324 1843241 -1 - 84 tRNA-Leu-CAA tRNAs
fig|6666666.148656.rna.50 RNA NC_015571.1 1933786 1933713 -1 - 74 tRNA-Arg-CCG tRNAs
fig|6666666.148656.rna.51 RNA NC_015571.1 1965359 1965433 2 + 75 tRNA-Pro-TGG - none -
fig|6666666.148656.rna.52 RNA NC_015571.1 1972840 1972753 -1 - 88 tRNA-Ser-GGA tRNAs
fig|6666666.148656.rna.53 RNA NC_015571.1 1991825 1991753 -2 - 73 tRNA-Gly-CCC tRNAs
fig|6666666.148656.rna.54 RNA NC_015571.1 2014854 2014938 3 + 85 tRNA-Ser-TGA - none -
fig|6666666.148656.rna.55 RNA NC_015571.1 2103691 2103618 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.148656.rna.56 RNA NC_015571.1 2233038 2232967 -3 - 72 tRNA-Arg-CCT - none -
fig|6666666.148656.rna.57 RNA NC_015571.1 2280275 2281749 2 + 1475 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.148656.rna.58 RNA NC_015571.1 2282303 2282376 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.148656.rna.59 RNA NC_015571.1 2282378 2282451 2 + 74 tRNA-Ala-TGC - none -
fig|6666666.148656.rna.60 RNA NC_015571.1 2282569 2285407 1 + 2839 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.148656.rna.61 RNA NC_015571.1 2285551 2285661 1 + 111 5S RNA - none -
fig|6666666.148656.rna.62 RNA NC_015571.1 2320476 2320393 -3 - 84 tRNA-Leu-GAG tRNAs
fig|6666666.148656.rna.63 RNA NC_015571.1 2320593 2320511 -3 - 83 tRNA-Leu-CAG tRNAs
fig|6666666.148656.rna.64 RNA NC_015571.1 2320755 2320683 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.148656.rna.65 RNA NC_015571.1 2331170 2331100 -2 - 71 tRNA-Cys-GCA tRNAs