fig|6666666.148659.peg.1 CDS NC_002950.2 1 1422 1 + 1422 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.148659.peg.2 CDS NC_002950.2 1435 2007 1 + 573 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.148659.peg.3 CDS NC_002950.2 2971 2009 -1 - 963 membrane protein, putative - none -
fig|6666666.148659.peg.4 CDS NC_002950.2 2954 3085 2 + 132 hypothetical protein - none -
fig|6666666.148659.peg.5 CDS NC_002950.2 3108 3812 3 + 705 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.148659.peg.6 CDS NC_002950.2 5041 3887 -1 - 1155 FIG00935710: hypothetical protein - none -
fig|6666666.148659.peg.7 CDS NC_002950.2 6473 5094 -2 - 1380 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.148659.peg.8 CDS NC_002950.2 7963 7175 -1 - 789 Mobile element protein - none -
fig|6666666.148659.peg.9 CDS NC_002950.2 8364 8167 -3 - 198 ISPg5, transposase Orf1 - none -
fig|6666666.148659.peg.10 CDS NC_002950.2 8915 11494 2 + 2580 ATP-dependent Clp protease ATP-binding subunit ClpA Proteolysis in bacteria, ATP-dependent;
Ribosome recycling related cluster
fig|6666666.148659.peg.11 CDS NC_002950.2 11624 11511 -2 - 114 hypothetical protein - none -
fig|6666666.148659.peg.12 CDS NC_002950.2 11634 14645 3 + 3012 Beta-N-acetylglucosaminidase - none -
fig|6666666.148659.peg.13 CDS NC_002950.2 14693 15721 2 + 1029 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.14 CDS NC_002950.2 15731 16501 2 + 771 FIG00936262: hypothetical protein - none -
fig|6666666.148659.peg.15 CDS NC_002950.2 17131 16979 -1 - 153 hypothetical protein - none -
fig|6666666.148659.peg.16 CDS NC_002950.2 17087 18436 2 + 1350 Two-component system response regulator - none -
fig|6666666.148659.peg.17 CDS NC_002950.2 18447 19784 3 + 1338 putative two-component system sensor histidine kinase - none -
fig|6666666.148659.peg.18 CDS NC_002950.2 19854 22034 3 + 2181 FIG00935570: hypothetical protein - none -
fig|6666666.148659.peg.19 CDS NC_002950.2 22180 23337 1 + 1158 Mobile element protein - none -
fig|6666666.148659.peg.20 CDS NC_002950.2 23522 24226 2 + 705 transcriptional regulator, MarR family - none -
fig|6666666.148659.peg.21 CDS NC_002950.2 25213 24212 -1 - 1002 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.148659.peg.22 CDS NC_002950.2 26886 25210 -3 - 1677 Sulfate permease - none -
fig|6666666.148659.peg.23 CDS NC_002950.2 27992 28528 2 + 537 Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) Oxidative stress
fig|6666666.148659.peg.24 CDS NC_002950.2 28555 29256 1 + 702 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.148659.peg.25 CDS NC_002950.2 29269 32745 1 + 3477 FIG00936082: hypothetical protein - none -
fig|6666666.148659.peg.26 CDS NC_002950.2 32821 33996 1 + 1176 FIG00897671: hypothetical protein - none -
fig|6666666.148659.peg.27 CDS NC_002950.2 34003 34491 1 + 489 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.148659.peg.28 CDS NC_002950.2 35136 34594 -3 - 543 TRNA/rRNA methyltransferase - none -
fig|6666666.148659.peg.29 CDS NC_002950.2 35444 35289 -2 - 156 hypothetical protein - none -
fig|6666666.148659.peg.30 CDS NC_002950.2 35986 36462 1 + 477 Cytidine deaminase (EC 3.5.4.5) pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.148659.peg.31 CDS NC_002950.2 37669 36995 -1 - 675 FIG00936133: hypothetical protein - none -
fig|6666666.148659.peg.32 CDS NC_002950.2 40128 37717 -3 - 2412 Beta-mannosidase (EC 3.2.1.25) Mannose Metabolism
fig|6666666.148659.peg.33 CDS NC_002950.2 41672 40332 -2 - 1341 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.148659.peg.34 CDS NC_002950.2 41779 41895 1 + 117 transposase in ISPg1 - none -
fig|6666666.148659.peg.35 CDS NC_002950.2 42639 42325 -3 - 315 Thioredoxin CBSS-315749.4.peg.3658
fig|6666666.148659.peg.36 CDS NC_002950.2 46374 42688 -3 - 3687 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.148659.peg.37 CDS NC_002950.2 46659 47024 3 + 366 LSU ribosomal protein L19p - none -
fig|6666666.148659.peg.38 CDS NC_002950.2 47732 47896 2 + 165 hypothetical protein - none -
fig|6666666.148659.peg.39 CDS NC_002950.2 48266 48463 2 + 198 ISPg5, transposase Orf1 - none -
fig|6666666.148659.peg.40 CDS NC_002950.2 48667 49455 1 + 789 Mobile element protein - none -
fig|6666666.148659.peg.41 CDS NC_002950.2 49769 51049 2 + 1281 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine Biosynthesis
fig|6666666.148659.peg.42 CDS NC_002950.2 51281 53539 2 + 2259 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.148659.peg.43 CDS NC_002950.2 54174 54061 -3 - 114 hypothetical protein - none -
fig|6666666.148659.peg.44 CDS NC_002950.2 54199 56253 1 + 2055 Chaperone protein HtpG Protein chaperones
fig|6666666.148659.peg.45 CDS NC_002950.2 57290 56436 -2 - 855 Phosphatidate cytidylyltransferase (EC 2.7.7.41) - none -
fig|6666666.148659.peg.46 CDS NC_002950.2 59301 57319 -3 - 1983 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.148659.peg.47 CDS NC_002950.2 60647 59544 -2 - 1104 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.148659.peg.48 CDS NC_002950.2 61056 62213 3 + 1158 Mobile element protein - none -
fig|6666666.148659.peg.49 CDS NC_002950.2 62317 62556 1 + 240 Mobile element protein - none -
fig|6666666.148659.peg.50 CDS NC_002950.2 62571 63281 3 + 711 Mobile element protein - none -
fig|6666666.148659.peg.51 CDS NC_002950.2 63306 63434 3 + 129 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.52 CDS NC_002950.2 63559 64746 1 + 1188 sensor histidine kinase - none -
fig|6666666.148659.peg.53 CDS NC_002950.2 64935 65069 3 + 135 hypothetical protein - none -
fig|6666666.148659.peg.54 CDS NC_002950.2 65205 66959 3 + 1755 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.148659.peg.55 CDS NC_002950.2 66956 68011 2 + 1056 FIG00936511: hypothetical protein - none -
fig|6666666.148659.peg.56 CDS NC_002950.2 68142 69842 3 + 1701 FIG00935736: hypothetical protein - none -
fig|6666666.148659.peg.57 CDS NC_002950.2 69875 71059 2 + 1185 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.148659.peg.58 CDS NC_002950.2 71059 71652 1 + 594 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.148659.peg.59 CDS NC_002950.2 71666 72049 2 + 384 hypothetical protein - none -
fig|6666666.148659.peg.60 CDS NC_002950.2 72056 72238 2 + 183 hypothetical protein - none -
fig|6666666.148659.peg.61 CDS NC_002950.2 72342 73823 3 + 1482 COG1649 predicted glycoside hydrolase - none -
fig|6666666.148659.peg.62 CDS NC_002950.2 73828 75870 1 + 2043 putative helicase - none -
fig|6666666.148659.peg.63 CDS NC_002950.2 77146 75968 -1 - 1179 FIG00936515: hypothetical protein - none -
fig|6666666.148659.peg.64 CDS NC_002950.2 80283 77164 -3 - 3120 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.148659.peg.65 CDS NC_002950.2 81481 80303 -1 - 1179 Cation efflux system protein - none -
fig|6666666.148659.peg.66 CDS NC_002950.2 82346 82020 -2 - 327 FIG00936254: hypothetical protein - none -
fig|6666666.148659.peg.67 CDS NC_002950.2 84025 82511 -1 - 1515 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.148659.peg.68 CDS NC_002950.2 84821 84030 -2 - 792 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.148659.peg.69 CDS NC_002950.2 86209 84821 -1 - 1389 N-acetylglucosamine deacetylase (EC 3.5.1.-) / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.148659.peg.70 CDS NC_002950.2 87237 86188 -3 - 1050 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.148659.peg.71 CDS NC_002950.2 88160 87330 -2 - 831 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.148659.peg.72 CDS NC_002950.2 89262 88177 -3 - 1086 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.148659.peg.73 CDS NC_002950.2 90453 89287 -3 - 1167 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.148659.peg.74 CDS NC_002950.2 91423 90482 -1 - 942 Hemagglutinin - none -
fig|6666666.148659.peg.75 CDS NC_002950.2 92354 91656 -2 - 699 FIG00936191: hypothetical protein - none -
fig|6666666.148659.peg.76 CDS NC_002950.2 93628 92327 -1 - 1302 abortive infection protein, putative - none -
fig|6666666.148659.peg.77 CDS NC_002950.2 93945 96122 3 + 2178 FIG00936482: hypothetical protein - none -
fig|6666666.148659.peg.78 CDS NC_002950.2 96184 97086 1 + 903 FIG00935759: hypothetical protein - none -
fig|6666666.148659.peg.79 CDS NC_002950.2 97092 97877 3 + 786 FIG00936274: hypothetical protein - none -
fig|6666666.148659.peg.80 CDS NC_002950.2 97972 99171 1 + 1200 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.148659.peg.81 CDS NC_002950.2 99237 99124 -3 - 114 hypothetical protein - none -
fig|6666666.148659.peg.82 CDS NC_002950.2 99312 100616 3 + 1305 Alpha-galactosidase (EC 3.2.1.22) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization
fig|6666666.148659.peg.83 CDS NC_002950.2 102449 100635 -2 - 1815 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.148659.peg.84 CDS NC_002950.2 103215 102595 -3 - 621 Arabinose 5-phosphate isomerase (EC 5.3.1.13) KDO2-Lipid A biosynthesis
fig|6666666.148659.peg.85 CDS NC_002950.2 103415 104632 2 + 1218 putative zinc protease ymxG - none -
fig|6666666.148659.peg.86 CDS NC_002950.2 105664 106143 1 + 480 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.148659.peg.87 CDS NC_002950.2 107547 106273 -3 - 1275 ABC-type multidrug transport system, permease component - none -
fig|6666666.148659.peg.88 CDS NC_002950.2 108730 107549 -1 - 1182 ABC-type multidrug transport system, permease component - none -
fig|6666666.148659.peg.89 CDS NC_002950.2 109728 108733 -3 - 996 HlyD family secretion protein - none -
fig|6666666.148659.peg.90 CDS NC_002950.2 111283 109778 -1 - 1506 Type I secretion system, outer membrane component LapE - none -
fig|6666666.148659.peg.91 CDS NC_002950.2 111678 111797 3 + 120 hypothetical protein - none -
fig|6666666.148659.peg.92 CDS NC_002950.2 114853 112178 -1 - 2676 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.148659.peg.93 CDS NC_002950.2 115838 115146 -2 - 693 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.148659.peg.94 CDS NC_002950.2 118376 115917 -2 - 2460 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.148659.peg.95 CDS NC_002950.2 119272 118853 -1 - 420 hypothetical protein - none -
fig|6666666.148659.peg.96 CDS NC_002950.2 119390 119521 2 + 132 hypothetical protein - none -
fig|6666666.148659.peg.97 CDS NC_002950.2 121173 121301 3 + 129 hypothetical protein - none -
fig|6666666.148659.peg.98 CDS NC_002950.2 121384 121527 1 + 144 hypothetical protein - none -
fig|6666666.148659.peg.99 CDS NC_002950.2 125481 127508 3 + 2028 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.148659.peg.100 CDS NC_002950.2 128216 128061 -2 - 156 Mobile element protein - none -
fig|6666666.148659.peg.101 CDS NC_002950.2 128286 128528 3 + 243 FIG00936236: hypothetical protein - none -
fig|6666666.148659.peg.102 CDS NC_002950.2 128888 129994 2 + 1107 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.148659.peg.103 CDS NC_002950.2 130259 131449 2 + 1191 UDP-N-acetyl-D-mannosaminuronate dehydrogenase - none -
fig|6666666.148659.peg.104 CDS NC_002950.2 131471 132694 2 + 1224 hypothetical protein - none -
fig|6666666.148659.peg.105 CDS NC_002950.2 132731 133771 2 + 1041 glycosyl transferase, group 1 family protein - none -
fig|6666666.148659.peg.106 CDS NC_002950.2 133814 135088 2 + 1275 capsular polysacharride biosynthesis gene, putative - none -
fig|6666666.148659.peg.107 CDS NC_002950.2 135230 136030 2 + 801 hypothetical protein - none -
fig|6666666.148659.peg.108 CDS NC_002950.2 136089 136922 3 + 834 conserved domain protein - none -
fig|6666666.148659.peg.109 CDS NC_002950.2 136919 138058 2 + 1140 hypothetical protein - none -
fig|6666666.148659.peg.110 CDS NC_002950.2 138609 139832 3 + 1224 FIG00936240: hypothetical protein - none -
fig|6666666.148659.peg.111 CDS NC_002950.2 139807 141345 1 + 1539 O-antigen flippase Wzx KDO2-Lipid A biosynthesis
fig|6666666.148659.peg.112 CDS NC_002950.2 141349 142404 1 + 1056 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster - none -
fig|6666666.148659.peg.113 CDS NC_002950.2 142440 143138 3 + 699 Probable UDP-N-acetyl-D-mannosaminuronic acid transferase (EC 2.4.1.-) - none -
fig|6666666.148659.peg.114 CDS NC_002950.2 143144 144304 2 + 1161 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) - none -
fig|6666666.148659.peg.115 CDS NC_002950.2 144608 144874 2 + 267 DNA-binding protein HU-beta DNA structural proteins, bacterial
fig|6666666.148659.peg.116 CDS NC_002950.2 145070 145645 2 + 576 FIG00936171: hypothetical protein - none -
fig|6666666.148659.peg.117 CDS NC_002950.2 146324 145704 -2 - 621 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.148659.peg.118 CDS NC_002950.2 146876 146328 -2 - 549 FIG00935729: hypothetical protein - none -
fig|6666666.148659.peg.119 CDS NC_002950.2 147985 146873 -1 - 1113 Alkaline phosphodiesterase I (EC 3.1.4.1) / Nucleotide pyrophosphatase (EC 3.6.1.9) Purine conversions
fig|6666666.148659.peg.120 CDS NC_002950.2 148283 148017 -2 - 267 FIG00935494: hypothetical protein - none -
fig|6666666.148659.peg.121 CDS NC_002950.2 148571 148362 -2 - 210 hypothetical protein - none -
fig|6666666.148659.peg.122 CDS NC_002950.2 148441 149727 1 + 1287 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.148659.peg.123 CDS NC_002950.2 149734 150708 1 + 975 FIG00936315: hypothetical protein - none -
fig|6666666.148659.peg.124 CDS NC_002950.2 150725 151849 2 + 1125 FIG00936601: hypothetical protein - none -
fig|6666666.148659.peg.125 CDS NC_002950.2 151905 152030 3 + 126 hypothetical protein - none -
fig|6666666.148659.peg.126 CDS NC_002950.2 152743 152012 -1 - 732 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.148659.peg.127 CDS NC_002950.2 152807 152932 2 + 126 hypothetical protein - none -
fig|6666666.148659.peg.128 CDS NC_002950.2 154352 153042 -2 - 1311 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase - none -
fig|6666666.148659.peg.129 CDS NC_002950.2 155854 154349 -1 - 1506 FIG00935555: hypothetical protein - none -
fig|6666666.148659.peg.130 CDS NC_002950.2 157225 155873 -1 - 1353 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.148659.peg.131 CDS NC_002950.2 158033 157257 -2 - 777 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) ECSIG4-SIG7;
RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.148659.peg.132 CDS NC_002950.2 158164 159213 1 + 1050 putative dolichol-P-glucose synthetase - none -
fig|6666666.148659.peg.133 CDS NC_002950.2 159331 160698 1 + 1368 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.148659.peg.134 CDS NC_002950.2 160765 161694 1 + 930 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.148659.peg.135 CDS NC_002950.2 163231 161876 -1 - 1356 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.148659.peg.136 CDS NC_002950.2 163918 163241 -1 - 678 FIG00937393: hypothetical protein - none -
fig|6666666.148659.peg.137 CDS NC_002950.2 164837 163968 -2 - 870 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.148659.peg.138 CDS NC_002950.2 165621 164845 -3 - 777 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.148659.peg.139 CDS NC_002950.2 166715 165837 -2 - 879 N-carbamoylputrescine amidase (3.5.1.53) / Aliphatic amidase AmiE (EC 3.5.1.4) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.148659.peg.140 CDS NC_002950.2 167758 166733 -1 - 1026 Agmatine deiminase (EC 3.5.3.12) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.148659.peg.141 CDS NC_002950.2 168495 168109 -3 - 387 putative protein-export membrane protein - none -
fig|6666666.148659.peg.142 CDS NC_002950.2 169178 168498 -2 - 681 FIG00936113: hypothetical protein - none -
fig|6666666.148659.peg.143 CDS NC_002950.2 169757 169218 -2 - 540 FIG00936439: hypothetical protein - none -
fig|6666666.148659.peg.144 CDS NC_002950.2 170997 169744 -3 - 1254 Transcriptional regulator - none -
fig|6666666.148659.peg.145 CDS NC_002950.2 172293 171025 -3 - 1269 FIG00936180: hypothetical protein - none -
fig|6666666.148659.peg.146 CDS NC_002950.2 173634 172330 -3 - 1305 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.148659.peg.147 CDS NC_002950.2 174584 173631 -2 - 954 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.148659.peg.148 CDS NC_002950.2 175747 174611 -1 - 1137 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) Polyamine Metabolism
fig|6666666.148659.peg.149 CDS NC_002950.2 177520 175757 -1 - 1764 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.148659.peg.150 CDS NC_002950.2 177605 177718 2 + 114 hypothetical protein - none -
fig|6666666.148659.peg.151 CDS NC_002950.2 178943 177951 -2 - 993 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.148659.peg.152 CDS NC_002950.2 178968 179849 3 + 882 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.148659.peg.153 CDS NC_002950.2 179846 180331 2 + 486 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.148659.peg.154 CDS NC_002950.2 180315 181055 3 + 741 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148659.peg.155 CDS NC_002950.2 183254 181185 -2 - 2070 Endothelin-converting enzyme 1 precursor (EC 3.4.24.71) - none -
fig|6666666.148659.peg.156 CDS NC_002950.2 184175 183273 -2 - 903 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.148659.peg.157 CDS NC_002950.2 184491 184357 -3 - 135 hypothetical protein - none -
fig|6666666.148659.peg.158 CDS NC_002950.2 185176 184595 -1 - 582 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.148659.peg.159 CDS NC_002950.2 186927 185326 -3 - 1602 Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90) Glycolysis and Gluconeogenesis
fig|6666666.148659.peg.160 CDS NC_002950.2 187473 187171 -3 - 303 FIG00936587: hypothetical protein - none -
fig|6666666.148659.peg.161 CDS NC_002950.2 187897 187460 -1 - 438 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.148659.peg.162 CDS NC_002950.2 188460 187903 -3 - 558 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Translation termination factors bacterial
fig|6666666.148659.peg.163 CDS NC_002950.2 189180 188602 -3 - 579 LSU ribosomal protein L25p - none -
fig|6666666.148659.peg.164 CDS NC_002950.2 189324 189440 3 + 117 hypothetical protein - none -
fig|6666666.148659.peg.165 CDS NC_002950.2 189792 191834 3 + 2043 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.148659.peg.166 CDS NC_002950.2 191968 191822 -1 - 147 hypothetical protein - none -
fig|6666666.148659.peg.167 CDS NC_002950.2 192035 193636 2 + 1602 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.148659.peg.168 CDS NC_002950.2 193633 194415 1 + 783 exonuclease - none -
fig|6666666.148659.peg.169 CDS NC_002950.2 194373 194504 3 + 132 hypothetical protein - none -
fig|6666666.148659.peg.170 CDS NC_002950.2 194858 194478 -2 - 381 transcriptional regulator, putative - none -
fig|6666666.148659.peg.171 CDS NC_002950.2 197580 194902 -3 - 2679 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.148659.peg.172 CDS NC_002950.2 198748 199101 1 + 354 FIG00936212: hypothetical protein - none -
fig|6666666.148659.peg.173 CDS NC_002950.2 199227 200384 3 + 1158 Mobile element protein - none -
fig|6666666.148659.peg.174 CDS NC_002950.2 200458 201843 1 + 1386 FIG00936212: hypothetical protein - none -
fig|6666666.148659.peg.175 CDS NC_002950.2 201941 202897 2 + 957 FIG00935585: hypothetical protein - none -
fig|6666666.148659.peg.176 CDS NC_002950.2 203195 204535 2 + 1341 lipoprotein, putative - none -
fig|6666666.148659.peg.177 CDS NC_002950.2 204544 205545 1 + 1002 immunoreactive 32 kDa antigen PG49 - none -
fig|6666666.148659.peg.178 CDS NC_002950.2 205692 209372 3 + 3681 FIG00935890: hypothetical protein - none -
fig|6666666.148659.peg.179 CDS NC_002950.2 209569 216183 1 + 6615 FIG00935890: hypothetical protein - none -
fig|6666666.148659.peg.180 CDS NC_002950.2 216542 217627 2 + 1086 Mobile element protein - none -
fig|6666666.148659.peg.181 CDS NC_002950.2 217652 217942 2 + 291 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.182 CDS NC_002950.2 218469 221522 3 + 3054 SusC, outer membrane protein involved in starch binding - none -
fig|6666666.148659.peg.183 CDS NC_002950.2 221552 223057 2 + 1506 lipoprotein RagB - none -
fig|6666666.148659.peg.184 CDS NC_002950.2 223466 223284 -2 - 183 ISPg6, transposase - none -
fig|6666666.148659.peg.185 CDS NC_002950.2 223749 223576 -3 - 174 ISPg6, transposase - none -
fig|6666666.148659.peg.186 CDS NC_002950.2 224074 225444 1 + 1371 FIG00936185: hypothetical protein - none -
fig|6666666.148659.peg.187 CDS NC_002950.2 225431 226138 2 + 708 FIG00936563: hypothetical protein - none -
fig|6666666.148659.peg.188 CDS NC_002950.2 226216 226980 1 + 765 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.148659.peg.189 CDS NC_002950.2 226998 229673 3 + 2676 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.148659.peg.190 CDS NC_002950.2 229730 230254 2 + 525 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.148659.peg.191 CDS NC_002950.2 230307 230780 3 + 474 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.148659.peg.192 CDS NC_002950.2 231068 231970 2 + 903 Mobile element protein - none -
fig|6666666.148659.peg.193 CDS NC_002950.2 232186 232764 1 + 579 Rubrerythrin Oxidative stress;
Rubrerythrin
fig|6666666.148659.peg.194 CDS NC_002950.2 233043 235868 3 + 2826 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.148659.peg.195 CDS NC_002950.2 236866 237561 1 + 696 FIG00936229: hypothetical protein - none -
fig|6666666.148659.peg.196 CDS NC_002950.2 238227 237514 -3 - 714 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.148659.peg.197 CDS NC_002950.2 238441 238211 -1 - 231 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.148659.peg.198 CDS NC_002950.2 238860 238447 -3 - 414 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.148659.peg.199 CDS NC_002950.2 239603 238857 -2 - 747 uroporphyrinogen-III synthase HemD, putative - none -
fig|6666666.148659.peg.200 CDS NC_002950.2 240301 239594 -1 - 708 FIG00935602: hypothetical protein - none -
fig|6666666.148659.peg.201 CDS NC_002950.2 240570 240352 -3 - 219 FIG00936334: hypothetical protein - none -
fig|6666666.148659.peg.202 CDS NC_002950.2 242183 240603 -2 - 1581 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.148659.peg.203 CDS NC_002950.2 243044 243175 2 + 132 hypothetical protein - none -
fig|6666666.148659.peg.204 CDS NC_002950.2 243371 244156 2 + 786 Formate efflux transporter (TC 2.A.44 family) - none -
fig|6666666.148659.peg.205 CDS NC_002950.2 246059 244251 -2 - 1809 Cobalt-precorrin-6x reductase (EC 1.3.1.54) / Cobalt-precorrin-6 synthase, anaerobic Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.206 CDS NC_002950.2 247900 246056 -1 - 1845 Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.207 CDS NC_002950.2 249155 247914 -2 - 1242 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.208 CDS NC_002950.2 250668 249148 -3 - 1521 Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Cobalamin synthesis;
Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.209 CDS NC_002950.2 251103 251603 3 + 501 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.148659.peg.210 CDS NC_002950.2 251600 252088 2 + 489 FIG00936592: hypothetical protein - none -
fig|6666666.148659.peg.211 CDS NC_002950.2 252096 252596 3 + 501 FIG00935934: hypothetical protein - none -
fig|6666666.148659.peg.212 CDS NC_002950.2 252630 253523 3 + 894 FIG00936442: hypothetical protein - none -
fig|6666666.148659.peg.213 CDS NC_002950.2 253537 254394 1 + 858 FIG00935824: hypothetical protein - none -
fig|6666666.148659.peg.214 CDS NC_002950.2 255648 255100 -3 - 549 hypothetical protein - none -
fig|6666666.148659.peg.215 CDS NC_002950.2 255924 255703 -3 - 222 hypothetical protein - none -
fig|6666666.148659.peg.216 CDS NC_002950.2 256470 256003 -3 - 468 DNA-binding protein, histone-like family - none -
fig|6666666.148659.peg.217 CDS NC_002950.2 256712 256882 2 + 171 hypothetical protein - none -
fig|6666666.148659.peg.218 CDS NC_002950.2 256980 256867 -3 - 114 hypothetical protein - none -
fig|6666666.148659.peg.219 CDS NC_002950.2 257203 256937 -1 - 267 FIG00936583: hypothetical protein - none -
fig|6666666.148659.peg.220 CDS NC_002950.2 257700 257209 -3 - 492 putative DNA polymerase III epsilon chain - none -
fig|6666666.148659.peg.221 CDS NC_002950.2 258342 257704 -3 - 639 Multiple antibiotic resistance protein marC - none -
fig|6666666.148659.peg.222 CDS NC_002950.2 259732 258575 -1 - 1158 Mobile element protein - none -
fig|6666666.148659.peg.223 CDS NC_002950.2 262621 259928 -1 - 2694 FIG00935601: hypothetical protein - none -
fig|6666666.148659.peg.224 CDS NC_002950.2 264068 262683 -2 - 1386 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.148659.peg.225 CDS NC_002950.2 265040 264114 -2 - 927 NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18) Dimethylarginine metabolism
fig|6666666.148659.peg.226 CDS NC_002950.2 265512 266174 3 + 663 Transaldolase (EC 2.2.1.2) Pentose phosphate pathway
fig|6666666.148659.peg.227 CDS NC_002950.2 266171 267469 2 + 1299 alternate gene name: yzbB - none -
fig|6666666.148659.peg.228 CDS NC_002950.2 270013 267548 -1 - 2466 zinc carboxypeptidase, putative - none -
fig|6666666.148659.peg.229 CDS NC_002950.2 270244 270474 1 + 231 hypothetical protein - none -
fig|6666666.148659.peg.230 CDS NC_002950.2 271474 270851 -1 - 624 immunoreactive 23 kDa antigen PG66 - none -
fig|6666666.148659.peg.231 CDS NC_002950.2 271560 271673 3 + 114 hypothetical protein - none -
fig|6666666.148659.peg.232 CDS NC_002950.2 271691 273292 2 + 1602 carboxyl-terminal protease - none -
fig|6666666.148659.peg.233 CDS NC_002950.2 273364 274884 1 + 1521 FIG00936169: hypothetical protein - none -
fig|6666666.148659.peg.234 CDS NC_002950.2 274918 275586 1 + 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.148659.peg.235 CDS NC_002950.2 276023 276268 2 + 246 hypothetical protein - none -
fig|6666666.148659.peg.236 CDS NC_002950.2 277300 276485 -1 - 816 5@1-nucleotidase YjjG (EC 3.1.3.5) Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.148659.peg.237 CDS NC_002950.2 278304 277450 -3 - 855 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148659.peg.238 CDS NC_002950.2 279050 278349 -2 - 702 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.148659.peg.239 CDS NC_002950.2 279542 279066 -2 - 477 hypothetical protein - none -
fig|6666666.148659.peg.240 CDS NC_002950.2 280975 279863 -1 - 1113 UspA - none -
fig|6666666.148659.peg.241 CDS NC_002950.2 281394 281140 -3 - 255 FIG00935945: hypothetical protein - none -
fig|6666666.148659.peg.242 CDS NC_002950.2 281902 281600 -1 - 303 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.148659.peg.243 CDS NC_002950.2 283888 282029 -1 - 1860 Pyruvate carboxylase (EC 6.4.1.1) / Biotin carboxyl carrier protein Fatty Acid Biosynthesis FASII
fig|6666666.148659.peg.244 CDS NC_002950.2 284171 283995 -2 - 177 hypothetical protein - none -
fig|6666666.148659.peg.245 CDS NC_002950.2 284496 284335 -3 - 162 hypothetical protein - none -
fig|6666666.148659.peg.246 CDS NC_002950.2 284747 285205 2 + 459 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.148659.peg.247 CDS NC_002950.2 285252 286586 3 + 1335 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.148659.peg.248 CDS NC_002950.2 286682 289621 2 + 2940 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.148659.peg.249 CDS NC_002950.2 289649 290140 2 + 492 FIG00935510: hypothetical protein - none -
fig|6666666.148659.peg.250 CDS NC_002950.2 290174 291619 2 + 1446 Iron-sulfur cluster assembly protein SufB Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.148659.peg.251 CDS NC_002950.2 291659 292411 2 + 753 Iron-sulfur cluster assembly ATPase protein SufC Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.148659.peg.252 CDS NC_002950.2 292418 293761 2 + 1344 Iron-sulfur cluster assembly protein SufD Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.148659.peg.253 CDS NC_002950.2 294854 293952 -2 - 903 Mobile element protein - none -
fig|6666666.148659.peg.254 CDS NC_002950.2 295803 297095 3 + 1293 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.148659.peg.255 CDS NC_002950.2 297115 298182 1 + 1068 Glycosyl transferase, group 2 family protein - none -
fig|6666666.148659.peg.256 CDS NC_002950.2 299068 298868 -1 - 201 transposase in ISPg1 - none -
fig|6666666.148659.peg.257 CDS NC_002950.2 299240 301033 2 + 1794 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.148659.peg.258 CDS NC_002950.2 301038 302123 3 + 1086 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.148659.peg.259 CDS NC_002950.2 302168 302932 2 + 765 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.148659.peg.260 CDS NC_002950.2 303005 303931 2 + 927 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.148659.peg.261 CDS NC_002950.2 303982 304452 1 + 471 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.148659.peg.262 CDS NC_002950.2 304470 305798 3 + 1329 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.148659.peg.263 CDS NC_002950.2 305834 306430 2 + 597 FIG00936244: hypothetical protein - none -
fig|6666666.148659.peg.264 CDS NC_002950.2 307554 307045 -3 - 510 Thioredoxin CBSS-315749.4.peg.3658
fig|6666666.148659.peg.265 CDS NC_002950.2 308819 307692 -2 - 1128 FIG00935709: hypothetical protein - none -
fig|6666666.148659.peg.266 CDS NC_002950.2 308996 310126 2 + 1131 Mobile element protein - none -
fig|6666666.148659.peg.267 CDS NC_002950.2 310187 310537 2 + 351 FIG00936006: hypothetical protein - none -
fig|6666666.148659.peg.268 CDS NC_002950.2 313380 310765 -3 - 2616 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.148659.peg.269 CDS NC_002950.2 314715 313387 -3 - 1329 ABC transporter permease - none -
fig|6666666.148659.peg.270 CDS NC_002950.2 316113 314737 -3 - 1377 Macrolide-specific ABC-type efflux carrier (TC 3.A.1.122.1) - none -
fig|6666666.148659.peg.271 CDS NC_002950.2 317005 316334 -1 - 672 ABC transporter ATP-binding protein - none -
fig|6666666.148659.peg.272 CDS NC_002950.2 318335 317085 -2 - 1251 ABC transporter permease - none -
fig|6666666.148659.peg.273 CDS NC_002950.2 318334 318585 1 + 252 hypothetical protein - none -
fig|6666666.148659.peg.274 CDS NC_002950.2 318599 320104 2 + 1506 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.148659.peg.275 CDS NC_002950.2 320293 320514 1 + 222 FIG00935798: hypothetical protein - none -
fig|6666666.148659.peg.276 CDS NC_002950.2 320597 321538 2 + 942 FIG00936640: hypothetical protein - none -
fig|6666666.148659.peg.277 CDS NC_002950.2 321595 323070 1 + 1476 GldJ - none -
fig|6666666.148659.peg.278 CDS NC_002950.2 323164 323039 -1 - 126 hypothetical protein - none -
fig|6666666.148659.peg.279 CDS NC_002950.2 323297 324040 2 + 744 FIG00936075: hypothetical protein - none -
fig|6666666.148659.peg.280 CDS NC_002950.2 324044 325594 2 + 1551 FIG00935779: hypothetical protein - none -
fig|6666666.148659.peg.281 CDS NC_002950.2 325603 326682 1 + 1080 FIG00936301: hypothetical protein - none -
fig|6666666.148659.peg.282 CDS NC_002950.2 326852 327433 2 + 582 Chromate transport protein - none -
fig|6666666.148659.peg.283 CDS NC_002950.2 327452 328045 2 + 594 Chromate transport protein - none -
fig|6666666.148659.peg.284 CDS NC_002950.2 328761 328183 -3 - 579 secretion activator protein, putative - none -
fig|6666666.148659.peg.285 CDS NC_002950.2 330251 329361 -2 - 891 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster - none -
fig|6666666.148659.peg.286 CDS NC_002950.2 331390 330266 -1 - 1125 Smf protein DNA processing chain A - none -
fig|6666666.148659.peg.287 CDS NC_002950.2 334880 331383 -2 - 3498 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.148659.peg.288 CDS NC_002950.2 336494 336207 -2 - 288 ISPg3, transposase - none -
fig|6666666.148659.peg.289 CDS NC_002950.2 336710 338002 2 + 1293 TPR domain protein - none -
fig|6666666.148659.peg.290 CDS NC_002950.2 338359 338781 1 + 423 FIG00936370: hypothetical protein - none -
fig|6666666.148659.peg.291 CDS NC_002950.2 338791 339663 1 + 873 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148659.peg.292 CDS NC_002950.2 339699 341030 3 + 1332 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148659.peg.293 CDS NC_002950.2 341046 342029 3 + 984 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148659.peg.294 CDS NC_002950.2 342026 342703 2 + 678 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148659.peg.295 CDS NC_002950.2 342700 343290 1 + 591 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148659.peg.296 CDS NC_002950.2 343363 343887 1 + 525 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148659.peg.297 CDS NC_002950.2 345077 344100 -2 - 978 Thiamin biosynthesis lipoprotein ApbE Iron-sulfur cluster assembly
fig|6666666.148659.peg.298 CDS NC_002950.2 345649 345110 -1 - 540 Nitroreductase family protein - none -
fig|6666666.148659.peg.299 CDS NC_002950.2 346602 345649 -3 - 954 Glycosyl transferase, family 2 - none -
fig|6666666.148659.peg.300 CDS NC_002950.2 347138 346599 -2 - 540 FIG00936112: hypothetical protein - none -
fig|6666666.148659.peg.301 CDS NC_002950.2 347611 347814 1 + 204 hypothetical protein - none -
fig|6666666.148659.peg.302 CDS NC_002950.2 347875 348192 1 + 318 LSU ribosomal protein L21p CBSS-176279.3.peg.868
fig|6666666.148659.peg.303 CDS NC_002950.2 348220 348477 1 + 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868
fig|6666666.148659.peg.304 CDS NC_002950.2 348577 349848 1 + 1272 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.148659.peg.305 CDS NC_002950.2 352521 349861 -3 - 2661 Dipeptidyl-peptidase III (EC 3.4.14.4) - none -
fig|6666666.148659.peg.306 CDS NC_002950.2 352995 352783 -3 - 213 FIG00935683: hypothetical protein - none -
fig|6666666.148659.peg.307 CDS NC_002950.2 353134 353517 1 + 384 FIG00936528: hypothetical protein - none -
fig|6666666.148659.peg.308 CDS NC_002950.2 353549 354637 2 + 1089 FIG00936423: hypothetical protein - none -
fig|6666666.148659.peg.309 CDS NC_002950.2 354713 355819 2 + 1107 putative periplasmic protein kinase ArgK and related GTPases of G3E family - none -
fig|6666666.148659.peg.310 CDS NC_002950.2 355848 357026 3 + 1179 Na+/H+-dicarboxylate symporter - none -
fig|6666666.148659.peg.311 CDS NC_002950.2 357478 357149 -1 - 330 hypothetical protein - none -
fig|6666666.148659.peg.312 CDS NC_002950.2 359172 357679 -3 - 1494 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.148659.peg.313 CDS NC_002950.2 359804 359175 -2 - 630 Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.148659.peg.314 CDS NC_002950.2 360977 359829 -2 - 1149 FIG00935951: hypothetical protein - none -
fig|6666666.148659.peg.315 CDS NC_002950.2 362151 360997 -3 - 1155 FIG01176605: hypothetical protein - none -
fig|6666666.148659.peg.316 CDS NC_002950.2 363495 362245 -3 - 1251 Imidazolonepropionase (EC 3.5.2.7) Histidine Degradation
fig|6666666.148659.peg.317 CDS NC_002950.2 364519 363617 -1 - 903 Glutamate formiminotransferase (EC 2.1.2.5) @ Glutamate formyltransferase 5-FCL-like protein;
Histidine Degradation
fig|6666666.148659.peg.318 CDS NC_002950.2 365083 364568 -1 - 516 DNA-binding protein, histone-like family - none -
fig|6666666.148659.peg.319 CDS NC_002950.2 365759 367735 2 + 1977 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.148659.peg.320 CDS NC_002950.2 367798 368871 1 + 1074 FIG00935861: hypothetical protein - none -
fig|6666666.148659.peg.321 CDS NC_002950.2 369841 368882 -1 - 960 Glycosyltransferase - none -
fig|6666666.148659.peg.322 CDS NC_002950.2 370796 369894 -2 - 903 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.148659.peg.323 CDS NC_002950.2 371382 370813 -3 - 570 FIG00936108: hypothetical protein - none -
fig|6666666.148659.peg.324 CDS NC_002950.2 371610 371467 -3 - 144 hypothetical protein - none -
fig|6666666.148659.peg.325 CDS NC_002950.2 371670 375197 3 + 3528 FIG00935998: hypothetical protein - none -
fig|6666666.148659.peg.326 CDS NC_002950.2 375211 375747 1 + 537 FIG00936084: hypothetical protein - none -
fig|6666666.148659.peg.327 CDS NC_002950.2 375947 376063 2 + 117 hypothetical protein - none -
fig|6666666.148659.peg.328 CDS NC_002950.2 376466 376606 2 + 141 hypothetical protein - none -
fig|6666666.148659.peg.329 CDS NC_002950.2 376944 377057 3 + 114 hypothetical protein - none -
fig|6666666.148659.peg.330 CDS NC_002950.2 378452 377271 -2 - 1182 Methionine gamma-lyase (EC 4.4.1.11) Methionine Degradation
fig|6666666.148659.peg.331 CDS NC_002950.2 380102 378633 -2 - 1470 FIG00936367: hypothetical protein - none -
fig|6666666.148659.peg.332 CDS NC_002950.2 380698 380105 -1 - 594 FIG00935819: hypothetical protein - none -
fig|6666666.148659.peg.333 CDS NC_002950.2 380799 381404 3 + 606 GTP-binding protein EngB Universal GTPases
fig|6666666.148659.peg.334 CDS NC_002950.2 381414 382442 3 + 1029 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.148659.peg.335 CDS NC_002950.2 382485 384581 3 + 2097 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.148659.peg.336 CDS NC_002950.2 384599 385351 2 + 753 putative beta-phosphoglucomutase - none -
fig|6666666.148659.peg.337 CDS NC_002950.2 386900 385446 -2 - 1455 FIG00936311: hypothetical protein - none -
fig|6666666.148659.peg.338 CDS NC_002950.2 387480 388907 3 + 1428 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism
fig|6666666.148659.peg.339 CDS NC_002950.2 389301 389450 3 + 150 hypothetical protein - none -
fig|6666666.148659.peg.340 CDS NC_002950.2 390011 389823 -2 - 189 hypothetical protein - none -
fig|6666666.148659.peg.341 CDS NC_002950.2 389976 390767 3 + 792 FIG00935706: hypothetical protein - none -
fig|6666666.148659.peg.342 CDS NC_002950.2 390796 391533 1 + 738 FIG00936115: hypothetical protein - none -
fig|6666666.148659.peg.343 CDS NC_002950.2 391580 392494 2 + 915 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.148659.peg.344 CDS NC_002950.2 392507 392962 2 + 456 Aspartate carbamoyltransferase regulatory chain (PyrI) De Novo Pyrimidine Synthesis
fig|6666666.148659.peg.345 CDS NC_002950.2 392991 393578 3 + 588 Flavoredoxin - none -
fig|6666666.148659.peg.346 CDS NC_002950.2 393622 394212 1 + 591 LemA family protein - none -
fig|6666666.148659.peg.347 CDS NC_002950.2 394393 395541 1 + 1149 Beta-propeller domains of methanol dehydrogenase type - none -
fig|6666666.148659.peg.348 CDS NC_002950.2 395588 397609 2 + 2022 FIG00935733: hypothetical protein - none -
fig|6666666.148659.peg.349 CDS NC_002950.2 397610 398437 2 + 828 probable glutamine ABC transporter - none -
fig|6666666.148659.peg.350 CDS NC_002950.2 399705 398500 -3 - 1206 LSU m5C1962 methyltransferase RlmI RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.148659.peg.351 CDS NC_002950.2 400304 399702 -2 - 603 3@1-5@1 exonuclease domain protein - none -
fig|6666666.148659.peg.352 CDS NC_002950.2 400866 400345 -3 - 522 FIG00935795: hypothetical protein - none -
fig|6666666.148659.peg.353 CDS NC_002950.2 401385 403319 3 + 1935 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.148659.peg.354 CDS NC_002950.2 403350 403811 3 + 462 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.148659.peg.355 CDS NC_002950.2 404631 404497 -3 - 135 hypothetical protein - none -
fig|6666666.148659.peg.356 CDS NC_002950.2 405654 405538 -3 - 117 hypothetical protein - none -
fig|6666666.148659.peg.357 CDS NC_002950.2 406045 405851 -1 - 195 hypothetical protein - none -
fig|6666666.148659.peg.358 CDS NC_002950.2 406170 406529 3 + 360 LSU ribosomal protein L13p (L13Ae) - none -
fig|6666666.148659.peg.359 CDS NC_002950.2 406539 406925 3 + 387 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.148659.peg.360 CDS NC_002950.2 407060 407905 2 + 846 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.148659.peg.361 CDS NC_002950.2 408044 408868 2 + 825 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.148659.peg.362 CDS NC_002950.2 409209 409081 -3 - 129 FIG00936565: hypothetical protein - none -
fig|6666666.148659.peg.363 CDS NC_002950.2 409242 411278 3 + 2037 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.148659.peg.364 CDS NC_002950.2 412795 411275 -1 - 1521 Na+/H+ antiporter - none -
fig|6666666.148659.peg.365 CDS NC_002950.2 413331 414803 3 + 1473 miscellaneous; hypothetical/partial homology - none -
fig|6666666.148659.peg.366 CDS NC_002950.2 414906 416225 3 + 1320 Membrane-associated zinc metalloprotease - none -
fig|6666666.148659.peg.367 CDS NC_002950.2 416235 418757 3 + 2523 Recombination inhibitory protein MutS2 DNA repair, bacterial MutL-MutS system
fig|6666666.148659.peg.368 CDS NC_002950.2 418919 419110 2 + 192 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.148659.peg.369 CDS NC_002950.2 419187 420389 3 + 1203 site-specific recombinase, phage integrase family / Ribosome hibernation protein YhbH Ribosome activity modulation
fig|6666666.148659.peg.370 CDS NC_002950.2 421139 420978 -2 - 162 hypothetical protein - none -
fig|6666666.148659.peg.371 CDS NC_002950.2 421119 421970 3 + 852 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.148659.peg.372 CDS NC_002950.2 422129 422332 2 + 204 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.148659.peg.373 CDS NC_002950.2 422354 422893 2 + 540 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.148659.peg.374 CDS NC_002950.2 423067 423399 1 + 333 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster
fig|6666666.148659.peg.375 CDS NC_002950.2 423420 424118 3 + 699 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster
fig|6666666.148659.peg.376 CDS NC_002950.2 424134 424658 3 + 525 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster
fig|6666666.148659.peg.377 CDS NC_002950.2 424739 425077 2 + 339 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster
fig|6666666.148659.peg.378 CDS NC_002950.2 425189 428998 2 + 3810 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.148659.peg.379 CDS NC_002950.2 429064 433365 1 + 4302 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.148659.peg.380 CDS NC_002950.2 433653 434351 3 + 699 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.148659.peg.381 CDS NC_002950.2 434692 434402 -1 - 291 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.148659.peg.382 CDS NC_002950.2 435800 434706 -2 - 1095 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.148659.peg.383 CDS NC_002950.2 436177 435797 -1 - 381 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148659.peg.384 CDS NC_002950.2 437747 436335 -2 - 1413 Tpl protein - none -
fig|6666666.148659.peg.385 CDS NC_002950.2 439396 437855 -1 - 1542 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) CBSS-226186.1.peg.4416;
Purine conversions;
pyrimidine conversions
fig|6666666.148659.peg.386 CDS NC_002950.2 439851 439543 -3 - 309 Cell division ZapA family protein CBSS-226186.1.peg.4416
fig|6666666.148659.peg.387 CDS NC_002950.2 440154 439858 -3 - 297 FIG034863: hypothetical protein CBSS-226186.1.peg.4416
fig|6666666.148659.peg.388 CDS NC_002950.2 440366 440205 -2 - 162 hypothetical protein - none -
fig|6666666.148659.peg.389 CDS NC_002950.2 440376 440504 3 + 129 hypothetical protein - none -
fig|6666666.148659.peg.390 CDS NC_002950.2 441231 441545 3 + 315 FIG00935648: hypothetical protein - none -
fig|6666666.148659.peg.391 CDS NC_002950.2 441589 442410 1 + 822 FIG00935780: hypothetical protein - none -
fig|6666666.148659.peg.392 CDS NC_002950.2 442793 446641 2 + 3849 arginine-specific cysteine proteinase (Arg-gingipain) - none -
fig|6666666.148659.peg.393 CDS NC_002950.2 446641 449418 1 + 2778 FIG00935571: hypothetical protein - none -
fig|6666666.148659.peg.394 CDS NC_002950.2 451530 449674 -3 - 1857 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.148659.peg.395 CDS NC_002950.2 451871 451527 -2 - 345 hypothetical protein - none -
fig|6666666.148659.peg.396 CDS NC_002950.2 453742 451862 -1 - 1881 FIG00937328: hypothetical protein - none -
fig|6666666.148659.peg.397 CDS NC_002950.2 455171 453804 -2 - 1368 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) ECSIG4-SIG7;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.148659.peg.398 CDS NC_002950.2 457400 455223 -2 - 2178 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.148659.peg.399 CDS NC_002950.2 458648 457479 -2 - 1170 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.148659.peg.400 CDS NC_002950.2 459419 458751 -2 - 669 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent
fig|6666666.148659.peg.401 CDS NC_002950.2 460652 459792 -2 - 861 FIG00936717: hypothetical protein - none -
fig|6666666.148659.peg.402 CDS NC_002950.2 461783 460926 -2 - 858 FIG00936250: hypothetical protein - none -
fig|6666666.148659.peg.403 CDS NC_002950.2 461993 461874 -2 - 120 hypothetical protein - none -
fig|6666666.148659.peg.404 CDS NC_002950.2 462289 462633 1 + 345 FIG00935574: hypothetical protein - none -
fig|6666666.148659.peg.405 CDS NC_002950.2 462614 463273 2 + 660 FIG00935644: hypothetical protein - none -
fig|6666666.148659.peg.406 CDS NC_002950.2 464049 463309 -3 - 741 esterase, putative - none -
fig|6666666.148659.peg.407 CDS NC_002950.2 465038 464250 -2 - 789 Mobile element protein - none -
fig|6666666.148659.peg.408 CDS NC_002950.2 465439 465242 -1 - 198 ISPg5, transposase Orf1 - none -
fig|6666666.148659.peg.409 CDS NC_002950.2 465974 465843 -2 - 132 hypothetical protein - none -
fig|6666666.148659.peg.410 CDS NC_002950.2 465949 466125 1 + 177 hypothetical protein - none -
fig|6666666.148659.peg.411 CDS NC_002950.2 466240 468099 1 + 1860 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) - none -
fig|6666666.148659.peg.412 CDS NC_002950.2 468126 469133 3 + 1008 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) - none -
fig|6666666.148659.peg.413 CDS NC_002950.2 470736 469363 -3 - 1374 NOL1/NOP2/sun family protein - none -
fig|6666666.148659.peg.414 CDS NC_002950.2 471486 470773 -3 - 714 Tetrapyrrole methylase family protein - none -
fig|6666666.148659.peg.415 CDS NC_002950.2 472639 471524 -1 - 1116 FIG00935748: hypothetical protein - none -
fig|6666666.148659.peg.416 CDS NC_002950.2 473541 472798 -3 - 744 capsular polysaccharide biosythesis protein, putative - none -
fig|6666666.148659.peg.417 CDS NC_002950.2 476013 473551 -3 - 2463 Tyrosine-protein kinase Wzc (EC 2.7.10.2) - none -
fig|6666666.148659.peg.418 CDS NC_002950.2 476847 476044 -3 - 804 Polysaccharide export outer membrane protein - none -
fig|6666666.148659.peg.419 CDS NC_002950.2 477099 477974 3 + 876 FIG00936242: hypothetical protein - none -
fig|6666666.148659.peg.420 CDS NC_002950.2 477971 478870 2 + 900 FIG00936461: hypothetical protein - none -
fig|6666666.148659.peg.421 CDS NC_002950.2 478874 481507 2 + 2634 FIG00935563: hypothetical protein - none -
fig|6666666.148659.peg.422 CDS NC_002950.2 482188 483207 1 + 1020 hemagglutinin-related protein - none -
fig|6666666.148659.peg.423 CDS NC_002950.2 483396 485375 3 + 1980 Oligopeptide transporter, OPT family - none -
fig|6666666.148659.peg.424 CDS NC_002950.2 485365 486609 1 + 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.148659.peg.425 CDS NC_002950.2 486739 487446 1 + 708 Sulfur carrier protein adenylyltransferase ThiF Thiamin biosynthesis
fig|6666666.148659.peg.426 CDS NC_002950.2 487502 488236 2 + 735 Pantothenate kinase type III, CoaX-like (EC 2.7.1.33) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.148659.peg.427 CDS NC_002950.2 488229 489533 3 + 1305 putative outer membrane protein - none -
fig|6666666.148659.peg.428 CDS NC_002950.2 489545 490927 2 + 1383 TPR domain protein - none -
fig|6666666.148659.peg.429 CDS NC_002950.2 491024 491662 2 + 639 FIG00935793: hypothetical protein - none -
fig|6666666.148659.peg.430 CDS NC_002950.2 491659 492912 1 + 1254 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.148659.peg.431 CDS NC_002950.2 493019 495166 2 + 2148 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.148659.peg.432 CDS NC_002950.2 495456 496730 3 + 1275 FIG00935917: hypothetical protein - none -
fig|6666666.148659.peg.433 CDS NC_002950.2 497397 497570 3 + 174 hypothetical protein - none -
fig|6666666.148659.peg.434 CDS NC_002950.2 497870 499894 2 + 2025 PHP N-terminal domain protein - none -
fig|6666666.148659.peg.435 CDS NC_002950.2 499875 500168 3 + 294 hypothetical protein - none -
fig|6666666.148659.peg.436 CDS NC_002950.2 501403 500615 -1 - 789 Mobile element protein - none -
fig|6666666.148659.peg.437 CDS NC_002950.2 501969 501607 -3 - 363 ISPg5, transposase Orf1 - none -
fig|6666666.148659.peg.438 CDS NC_002950.2 502077 503162 3 + 1086 Mobile element protein - none -
fig|6666666.148659.peg.439 CDS NC_002950.2 503187 503399 3 + 213 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.440 CDS NC_002950.2 504785 503529 -2 - 1257 IS1478 transposase - none -
fig|6666666.148659.peg.441 CDS NC_002950.2 506303 504966 -2 - 1338 transporter, putative - none -
fig|6666666.148659.peg.442 CDS NC_002950.2 507693 506407 -3 - 1287 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.148659.peg.443 CDS NC_002950.2 508964 507693 -2 - 1272 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.148659.peg.444 CDS NC_002950.2 509508 508993 -3 - 516 ferric uptake transcriptional regulator - none -
fig|6666666.148659.peg.445 CDS NC_002950.2 510451 509579 -1 - 873 FIG00936211: hypothetical protein - none -
fig|6666666.148659.peg.446 CDS NC_002950.2 511474 510464 -1 - 1011 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.148659.peg.447 CDS NC_002950.2 511748 511497 -2 - 252 FIG00935839: hypothetical protein - none -
fig|6666666.148659.peg.448 CDS NC_002950.2 511958 511827 -2 - 132 hypothetical protein - none -
fig|6666666.148659.peg.449 CDS NC_002950.2 512434 513492 1 + 1059 FIG00935853: hypothetical protein - none -
fig|6666666.148659.peg.450 CDS NC_002950.2 513479 514474 2 + 996 Epoxyqueuosine (oQ) reductase QueG Queuosine-Archaeosine Biosynthesis
fig|6666666.148659.peg.451 CDS NC_002950.2 514446 514559 3 + 114 hypothetical protein - none -
fig|6666666.148659.peg.452 CDS NC_002950.2 514711 514598 -1 - 114 FIG00935665: hypothetical protein - none -
fig|6666666.148659.peg.453 CDS NC_002950.2 516138 515101 -3 - 1038 Low-specificity L-threonine aldolase (EC 4.1.2.5) Glycine Biosynthesis;
Threonine degradation
fig|6666666.148659.peg.454 CDS NC_002950.2 517308 516178 -3 - 1131 Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis
fig|6666666.148659.peg.455 CDS NC_002950.2 518852 517305 -2 - 1548 COG1649 predicted glycoside hydrolase - none -
fig|6666666.148659.peg.456 CDS NC_002950.2 519687 518842 -3 - 846 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.148659.peg.457 CDS NC_002950.2 519826 520605 1 + 780 FIG00935545: hypothetical protein - none -
fig|6666666.148659.peg.458 CDS NC_002950.2 521409 520696 -3 - 714 Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.459 CDS NC_002950.2 522712 521522 -1 - 1191 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Glycine Biosynthesis;
Glycine and Serine Utilization
fig|6666666.148659.peg.460 CDS NC_002950.2 523219 522788 -1 - 432 FIG00937286: hypothetical protein - none -
fig|6666666.148659.peg.461 CDS NC_002950.2 523934 523326 -2 - 609 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.148659.peg.462 CDS NC_002950.2 524948 523941 -2 - 1008 FIG00935560: hypothetical protein - none -
fig|6666666.148659.peg.463 CDS NC_002950.2 525414 525076 -3 - 339 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.148659.peg.464 CDS NC_002950.2 526009 525497 -1 - 513 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.148659.peg.465 CDS NC_002950.2 527523 526366 -3 - 1158 Mobile element protein - none -
fig|6666666.148659.peg.466 CDS NC_002950.2 527824 527693 -1 - 132 hypothetical protein - none -
fig|6666666.148659.peg.467 CDS NC_002950.2 528200 528054 -2 - 147 hypothetical protein - none -
fig|6666666.148659.peg.468 CDS NC_002950.2 528288 529340 3 + 1053 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.148659.peg.469 CDS NC_002950.2 529387 530868 1 + 1482 Polysaccharide biosynthesis protein - none -
fig|6666666.148659.peg.470 CDS NC_002950.2 530890 532308 1 + 1419 FIG00761799: membrane protein - none -
fig|6666666.148659.peg.471 CDS NC_002950.2 532324 534462 1 + 2139 FIG00936757: hypothetical protein - none -
fig|6666666.148659.peg.472 CDS NC_002950.2 534758 534498 -2 - 261 hypothetical protein - none -
fig|6666666.148659.peg.473 CDS NC_002950.2 534990 534832 -3 - 159 hypothetical protein - none -
fig|6666666.148659.peg.474 CDS NC_002950.2 535338 535207 -3 - 132 transposase in ISPg1 - none -
fig|6666666.148659.peg.475 CDS NC_002950.2 535587 536996 3 + 1410 FIG00935678: hypothetical protein - none -
fig|6666666.148659.peg.476 CDS NC_002950.2 537397 538083 1 + 687 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.148659.peg.477 CDS NC_002950.2 538102 538587 1 + 486 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Methionine Degradation
fig|6666666.148659.peg.478 CDS NC_002950.2 538915 539202 1 + 288 Mobile element protein - none -
fig|6666666.148659.peg.479 CDS NC_002950.2 539337 540467 3 + 1131 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148659.peg.480 CDS NC_002950.2 540514 541566 1 + 1053 membrane protein, putative - none -
fig|6666666.148659.peg.481 CDS NC_002950.2 541599 542060 3 + 462 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.148659.peg.482 CDS NC_002950.2 542142 544271 3 + 2130 Dipeptidyl peptidase IV - none -
fig|6666666.148659.peg.483 CDS NC_002950.2 544670 544323 -2 - 348 hypothetical protein - none -
fig|6666666.148659.peg.484 CDS NC_002950.2 544656 545222 3 + 567 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.148659.peg.485 CDS NC_002950.2 545335 545457 1 + 123 hypothetical protein - none -
fig|6666666.148659.peg.486 CDS NC_002950.2 545475 547685 3 + 2211 hemagglutinin, putative - none -
fig|6666666.148659.peg.487 CDS NC_002950.2 548828 548226 -2 - 603 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.148659.peg.488 CDS NC_002950.2 549678 548818 -3 - 861 FIG00935598: hypothetical protein - none -
fig|6666666.148659.peg.489 CDS NC_002950.2 550150 549695 -1 - 456 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.148659.peg.490 CDS NC_002950.2 551418 550186 -3 - 1233 Spore maturation protein A-like protein Spore Core Dehydration
fig|6666666.148659.peg.491 CDS NC_002950.2 552004 551438 -1 - 567 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.148659.peg.492 CDS NC_002950.2 552927 552037 -3 - 891 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.148659.peg.493 CDS NC_002950.2 556360 553019 -1 - 3342 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.148659.peg.494 CDS NC_002950.2 558030 556453 -3 - 1578 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.148659.peg.495 CDS NC_002950.2 559274 558027 -2 - 1248 FIG00935721: hypothetical protein - none -
fig|6666666.148659.peg.496 CDS NC_002950.2 562328 559305 -2 - 3024 FIG00936431: hypothetical protein - none -
fig|6666666.148659.peg.497 CDS NC_002950.2 563029 562304 -1 - 726 metal-dependent membrane protease - none -
fig|6666666.148659.peg.498 CDS NC_002950.2 565345 563708 -1 - 1638 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.148659.peg.499 CDS NC_002950.2 565474 565361 -1 - 114 hypothetical protein - none -
fig|6666666.148659.peg.500 CDS NC_002950.2 565867 565598 -1 - 270 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.148659.peg.501 CDS NC_002950.2 566877 566083 -3 - 795 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.148659.peg.502 CDS NC_002950.2 568484 566988 -2 - 1497 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.148659.peg.503 CDS NC_002950.2 568980 570758 3 + 1779 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.148659.peg.504 CDS NC_002950.2 570886 572769 1 + 1884 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.148659.peg.505 CDS NC_002950.2 572860 574743 1 + 1884 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.148659.peg.506 CDS NC_002950.2 574801 575850 1 + 1050 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.148659.peg.507 CDS NC_002950.2 575869 579096 1 + 3228 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.148659.peg.508 CDS NC_002950.2 581214 579286 -3 - 1929 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.148659.peg.509 CDS NC_002950.2 582187 581339 -1 - 849 Vancomycin B-type resistance protein VanW Resistance to Vancomycin
fig|6666666.148659.peg.510 CDS NC_002950.2 583233 583045 -3 - 189 hypothetical protein - none -
fig|6666666.148659.peg.511 CDS NC_002950.2 583382 585865 2 + 2484 putative ferric aerobactin receptor - none -
fig|6666666.148659.peg.512 CDS NC_002950.2 585900 586019 3 + 120 hypothetical protein - none -
fig|6666666.148659.peg.513 CDS NC_002950.2 586666 586046 -1 - 621 FIG00936056: hypothetical protein - none -
fig|6666666.148659.peg.514 CDS NC_002950.2 586913 586698 -2 - 216 hypothetical protein - none -
fig|6666666.148659.peg.515 CDS NC_002950.2 586994 588454 2 + 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.148659.peg.516 CDS NC_002950.2 589357 590670 1 + 1314 Outer membrane efflux protein precursor - none -
fig|6666666.148659.peg.517 CDS NC_002950.2 590705 591766 2 + 1062 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.148659.peg.518 CDS NC_002950.2 591763 594912 1 + 3150 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.148659.peg.519 CDS NC_002950.2 594897 595196 3 + 300 FIG00936253: hypothetical protein - none -
fig|6666666.148659.peg.520 CDS NC_002950.2 595639 595499 -1 - 141 hypothetical protein - none -
fig|6666666.148659.peg.521 CDS NC_002950.2 595878 596000 3 + 123 transcriptional regulator, putative - none -
fig|6666666.148659.peg.522 CDS NC_002950.2 596000 598138 2 + 2139 Type I restriction-modification enzyme M subunit - none -
fig|6666666.148659.peg.523 CDS NC_002950.2 598618 600288 1 + 1671 DNA METHYLASE-TYPE I RESTRICTION-MODIFICATION SYSTEM - none -
fig|6666666.148659.peg.524 CDS NC_002950.2 600481 600269 -1 - 213 FIG00938293: hypothetical protein - none -
fig|6666666.148659.peg.525 CDS NC_002950.2 600868 602049 1 + 1182 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.148659.peg.526 CDS NC_002950.2 602301 605819 3 + 3519 Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) Methionine Degradation;
Pyruvate:ferredoxin oxidoreductase
fig|6666666.148659.peg.527 CDS NC_002950.2 606052 605924 -1 - 129 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.528 CDS NC_002950.2 607162 606077 -1 - 1086 Mobile element protein - none -
fig|6666666.148659.peg.529 CDS NC_002950.2 607681 607547 -1 - 135 hypothetical protein - none -
fig|6666666.148659.peg.530 CDS NC_002950.2 608047 607904 -1 - 144 hypothetical protein - none -
fig|6666666.148659.peg.531 CDS NC_002950.2 611327 608457 -2 - 2871 Lysyl endopeptidase (EC 3.4.21.50) Serine endopeptidase (EC 3.4.21.-)
fig|6666666.148659.peg.532 CDS NC_002950.2 612270 611806 -3 - 465 DNA-binding protein, histone-like family - none -
fig|6666666.148659.peg.533 CDS NC_002950.2 613421 614320 2 + 900 hypothetical protein - none -
fig|6666666.148659.peg.534 CDS NC_002950.2 614393 615067 2 + 675 FIG00935768: hypothetical protein - none -
fig|6666666.148659.peg.535 CDS NC_002950.2 616421 615600 -2 - 822 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.148659.peg.536 CDS NC_002950.2 617586 616441 -3 - 1146 S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase - none -
fig|6666666.148659.peg.537 CDS NC_002950.2 619145 617790 -2 - 1356 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.148659.peg.538 CDS NC_002950.2 619362 621038 3 + 1677 putative membrane protein - none -
fig|6666666.148659.peg.539 CDS NC_002950.2 621525 621025 -3 - 501 FIG00936531: hypothetical protein - none -
fig|6666666.148659.peg.540 CDS NC_002950.2 621700 621506 -1 - 195 FIG00936531: hypothetical protein - none -
fig|6666666.148659.peg.541 CDS NC_002950.2 622691 621861 -2 - 831 hypothetical protein - none -
fig|6666666.148659.peg.542 CDS NC_002950.2 623531 623025 -2 - 507 DNA-binding protein, histone-like family - none -
fig|6666666.148659.peg.543 CDS NC_002950.2 624655 624089 -1 - 567 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.148659.peg.544 CDS NC_002950.2 626343 624787 -3 - 1557 FIG00935524: hypothetical protein - none -
fig|6666666.148659.peg.545 CDS NC_002950.2 626539 627552 1 + 1014 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.148659.peg.546 CDS NC_002950.2 627661 627524 -1 - 138 hypothetical protein - none -
fig|6666666.148659.peg.547 CDS NC_002950.2 628223 629158 2 + 936 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.148659.peg.548 CDS NC_002950.2 629158 629631 1 + 474 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.148659.peg.549 CDS NC_002950.2 629641 631842 1 + 2202 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.148659.peg.550 CDS NC_002950.2 631853 633322 2 + 1470 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.148659.peg.551 CDS NC_002950.2 633337 634596 1 + 1260 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.148659.peg.552 CDS NC_002950.2 634620 635972 3 + 1353 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.148659.peg.553 CDS NC_002950.2 635984 637240 2 + 1257 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.148659.peg.554 CDS NC_002950.2 637237 638376 1 + 1140 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.148659.peg.555 CDS NC_002950.2 638415 639746 3 + 1332 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.148659.peg.556 CDS NC_002950.2 639740 640516 2 + 777 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.148659.peg.557 CDS NC_002950.2 640574 642004 2 + 1431 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.148659.peg.558 CDS NC_002950.2 642007 643380 1 + 1374 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.148659.peg.559 CDS NC_002950.2 643454 643861 2 + 408 Transamidase GatB domain protein Macromolecular synthesis operon
fig|6666666.148659.peg.560 CDS NC_002950.2 645334 644702 -1 - 633 FIG00896360: hypothetical protein - none -
fig|6666666.148659.peg.561 CDS NC_002950.2 646207 645386 -1 - 822 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.148659.peg.562 CDS NC_002950.2 647798 646278 -2 - 1521 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2) / GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2) GMP synthase;
GMP synthase;
Purine conversions;
Purine conversions;
Purine salvage cluster;
Purine salvage cluster
fig|6666666.148659.peg.563 CDS NC_002950.2 648373 648570 1 + 198 ISPg5, transposase Orf1 - none -
fig|6666666.148659.peg.564 CDS NC_002950.2 648774 649562 3 + 789 Mobile element protein - none -
fig|6666666.148659.peg.565 CDS NC_002950.2 650028 650285 3 + 258 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent - none -
fig|6666666.148659.peg.566 CDS NC_002950.2 650502 651998 3 + 1497 HtrA protease/chaperone protein Periplasmic Stress Response
fig|6666666.148659.peg.567 CDS NC_002950.2 652188 653051 3 + 864 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.148659.peg.568 CDS NC_002950.2 653148 653501 3 + 354 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.148659.peg.569 CDS NC_002950.2 653505 653777 3 + 273 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.148659.peg.570 CDS NC_002950.2 653802 654341 3 + 540 LSU ribosomal protein L9p - none -
fig|6666666.148659.peg.571 CDS NC_002950.2 654617 656572 2 + 1956 membrane protein, putative - none -
fig|6666666.148659.peg.572 CDS NC_002950.2 656572 657792 1 + 1221 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.148659.peg.573 CDS NC_002950.2 658186 658329 1 + 144 hypothetical protein - none -
fig|6666666.148659.peg.574 CDS NC_002950.2 658615 658463 -1 - 153 hypothetical protein - none -
fig|6666666.148659.peg.575 CDS NC_002950.2 658688 659680 2 + 993 low affinity penicillin binding protein - none -
fig|6666666.148659.peg.576 CDS NC_002950.2 659710 660405 1 + 696 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.148659.peg.577 CDS NC_002950.2 660402 661271 3 + 870 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.148659.peg.578 CDS NC_002950.2 662496 661255 -3 - 1242 FIG00935961: hypothetical protein - none -
fig|6666666.148659.peg.579 CDS NC_002950.2 662560 663054 1 + 495 FIG00935532: hypothetical protein - none -
fig|6666666.148659.peg.580 CDS NC_002950.2 663085 663219 1 + 135 hypothetical protein - none -
fig|6666666.148659.peg.581 CDS NC_002950.2 663975 663694 -3 - 282 hypothetical protein - none -
fig|6666666.148659.peg.582 CDS NC_002950.2 664170 665102 3 + 933 FIG00936069: hypothetical protein - none -
fig|6666666.148659.peg.583 CDS NC_002950.2 665491 666015 1 + 525 FIG00935784: hypothetical protein - none -
fig|6666666.148659.peg.584 CDS NC_002950.2 666218 666967 2 + 750 FIG00936619: hypothetical protein - none -
fig|6666666.148659.peg.585 CDS NC_002950.2 667083 668972 3 + 1890 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.148659.peg.586 CDS NC_002950.2 668987 669112 2 + 126 hypothetical protein - none -
fig|6666666.148659.peg.587 CDS NC_002950.2 669075 670109 3 + 1035 FIG00936297: hypothetical protein - none -
fig|6666666.148659.peg.588 CDS NC_002950.2 670512 671078 3 + 567 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.148659.peg.589 CDS NC_002950.2 671244 672791 3 + 1548 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.148659.peg.590 CDS NC_002950.2 672998 675535 2 + 2538 ATP-dependent protease La (EC 3.4.21.53) Type I Proteolysis in bacteria, ATP-dependent
fig|6666666.148659.peg.591 CDS NC_002950.2 675532 676080 1 + 549 FIG00935813: hypothetical protein - none -
fig|6666666.148659.peg.592 CDS NC_002950.2 676077 677369 3 + 1293 FIG00694335: hypothetical protein - none -
fig|6666666.148659.peg.593 CDS NC_002950.2 677401 678156 1 + 756 Triosephosphate isomerase (EC 5.3.1.1) Glycolysis and Gluconeogenesis
fig|6666666.148659.peg.594 CDS NC_002950.2 678218 678724 2 + 507 FIG00935559: hypothetical protein - none -
fig|6666666.148659.peg.595 CDS NC_002950.2 678728 679309 2 + 582 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148659.peg.596 CDS NC_002950.2 679759 680406 1 + 648 hypothetical protein - none -
fig|6666666.148659.peg.597 CDS NC_002950.2 680487 680603 3 + 117 hypothetical protein - none -
fig|6666666.148659.peg.598 CDS NC_002950.2 680942 681061 2 + 120 hypothetical protein - none -
fig|6666666.148659.peg.599 CDS NC_002950.2 681525 681232 -3 - 294 RNA-binding protein - none -
fig|6666666.148659.peg.600 CDS NC_002950.2 682529 681774 -2 - 756 Lipopolysaccharide ABC transporter, ATP-binding protein LptB KDO2-Lipid A biosynthesis
fig|6666666.148659.peg.601 CDS NC_002950.2 683454 682588 -3 - 867 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.148659.peg.602 CDS NC_002950.2 683532 684248 3 + 717 Pyridoxine 5@1-phosphate synthase (EC 2.6.99.2) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.148659.peg.603 CDS NC_002950.2 684286 685020 1 + 735 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.148659.peg.604 CDS NC_002950.2 685059 685436 3 + 378 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.148659.peg.605 CDS NC_002950.2 685441 686268 1 + 828 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.148659.peg.606 CDS NC_002950.2 686283 686828 3 + 546 DJ-1/YajL/PfpI superfamily, includes chaperone protein YajL (former ThiJ), parkinsonism-associated protein DJ-1, peptidases PfpI, Hsp31 - none -
fig|6666666.148659.peg.607 CDS NC_002950.2 687800 686928 -2 - 873 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.148659.peg.608 CDS NC_002950.2 689161 687797 -1 - 1365 FIG00936724: hypothetical protein - none -
fig|6666666.148659.peg.609 CDS NC_002950.2 690194 689154 -2 - 1041 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.148659.peg.610 CDS NC_002950.2 691273 690200 -1 - 1074 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis
fig|6666666.148659.peg.611 CDS NC_002950.2 693072 691303 -3 - 1770 signal peptide peptidase SppA, 67K type - none -
fig|6666666.148659.peg.612 CDS NC_002950.2 694623 694504 -3 - 120 hypothetical protein - none -
fig|6666666.148659.peg.613 CDS NC_002950.2 695728 694832 -1 - 897 Outer membrane vitamin B12 receptor BtuB Coenzyme B12 biosynthesis
fig|6666666.148659.peg.614 CDS NC_002950.2 696959 695718 -2 - 1242 Outer membrane vitamin B12 receptor BtuB Coenzyme B12 biosynthesis
fig|6666666.148659.peg.615 CDS NC_002950.2 698136 696973 -3 - 1164 Adenosylcobinamide amidohydrolase (EC 3.5.1.90) Coenzyme B12 biosynthesis
fig|6666666.148659.peg.616 CDS NC_002950.2 699161 698160 -2 - 1002 iron compound ABC transporter, ATP-binding protein - none -
fig|6666666.148659.peg.617 CDS NC_002950.2 700203 699169 -3 - 1035 Vitamin B12 ABC transporter, permease component BtuC Coenzyme B12 biosynthesis
fig|6666666.148659.peg.618 CDS NC_002950.2 701375 700200 -2 - 1176 iron compound ABC transporter, periplasmic iron compound-binding protein, putative - none -
fig|6666666.148659.peg.619 CDS NC_002950.2 701960 702544 2 + 585 FIG00936574: hypothetical protein - none -
fig|6666666.148659.peg.620 CDS NC_002950.2 703054 702671 -1 - 384 FIG00936509: hypothetical protein - none -
fig|6666666.148659.peg.621 CDS NC_002950.2 703712 703161 -2 - 552 HDIG domain protein - none -
fig|6666666.148659.peg.622 CDS NC_002950.2 704273 703989 -2 - 285 Stress responsive alpha-beta barrel domain protein Dabb - none -
fig|6666666.148659.peg.623 CDS NC_002950.2 705544 704303 -1 - 1242 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.148659.peg.624 CDS NC_002950.2 706775 705603 -2 - 1173 immunoreactive 46 kDa antigen PG99 - none -
fig|6666666.148659.peg.625 CDS NC_002950.2 707187 707035 -3 - 153 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.148659.peg.626 CDS NC_002950.2 707848 707249 -1 - 600 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.148659.peg.627 CDS NC_002950.2 708409 707888 -1 - 522 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) KDO2-Lipid A biosynthesis
fig|6666666.148659.peg.628 CDS NC_002950.2 709238 708426 -2 - 813 FIG137884: hypothetical protein Coenzyme A Biosynthesis cluster
fig|6666666.148659.peg.629 CDS NC_002950.2 709785 709231 -3 - 555 Nitroreductase family protein - none -
fig|6666666.148659.peg.630 CDS NC_002950.2 709943 709782 -2 - 162 hypothetical protein - none -
fig|6666666.148659.peg.631 CDS NC_002950.2 710176 710045 -1 - 132 hypothetical protein - none -
fig|6666666.148659.peg.632 CDS NC_002950.2 710514 711920 3 + 1407 Oxidoreductase, Gfo/Idh/MocA family - none -
fig|6666666.148659.peg.633 CDS NC_002950.2 711934 715305 1 + 3372 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.148659.peg.634 CDS NC_002950.2 715388 715894 2 + 507 MdsC protein - none -
fig|6666666.148659.peg.635 CDS NC_002950.2 715906 716475 1 + 570 MdsC protein - none -
fig|6666666.148659.peg.636 CDS NC_002950.2 717485 717685 2 + 201 hypothetical protein - none -
fig|6666666.148659.peg.637 CDS NC_002950.2 717687 719864 3 + 2178 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.148659.peg.638 CDS NC_002950.2 719893 720774 1 + 882 Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.639 CDS NC_002950.2 721098 720826 -3 - 273 hypothetical protein - none -
fig|6666666.148659.peg.640 CDS NC_002950.2 721117 722031 1 + 915 Vitamin B12 ABC transporter, B12-binding component BtuF Coenzyme B12 biosynthesis
fig|6666666.148659.peg.641 CDS NC_002950.2 722028 723098 3 + 1071 Vitamin B12 ABC transporter, permease component BtuC Coenzyme B12 biosynthesis
fig|6666666.148659.peg.642 CDS NC_002950.2 723142 723900 1 + 759 FIG00936204: hypothetical protein - none -
fig|6666666.148659.peg.643 CDS NC_002950.2 724892 724299 -2 - 594 Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8) Aromatic amino acid interconversions with aryl acids;
Indole-pyruvate oxidoreductase complex
fig|6666666.148659.peg.644 CDS NC_002950.2 726526 724919 -1 - 1608 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) Aromatic amino acid interconversions with aryl acids;
Indole-pyruvate oxidoreductase complex
fig|6666666.148659.peg.645 CDS NC_002950.2 727365 726604 -3 - 762 FIG00935512: hypothetical protein - none -
fig|6666666.148659.peg.646 CDS NC_002950.2 727645 727767 1 + 123 hypothetical protein - none -
fig|6666666.148659.peg.647 CDS NC_002950.2 727793 728986 2 + 1194 Carboxynorspermidine dehydrogenase - none -
fig|6666666.148659.peg.648 CDS NC_002950.2 729019 729531 1 + 513 Nicotinamidase (EC 3.5.1.19) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.148659.peg.649 CDS NC_002950.2 729734 731068 2 + 1335 Type I secretion system, outer membrane component LapE - none -
fig|6666666.148659.peg.650 CDS NC_002950.2 731108 732361 2 + 1254 ABC transporter permease - none -
fig|6666666.148659.peg.651 CDS NC_002950.2 732698 732501 -2 - 198 hypothetical protein - none -
fig|6666666.148659.peg.652 CDS NC_002950.2 733011 735362 3 + 2352 ABC transporter, permease protein, putative - none -
fig|6666666.148659.peg.653 CDS NC_002950.2 735395 737761 2 + 2367 putative FtsX-related transmembrane transport protein - none -
fig|6666666.148659.peg.654 CDS NC_002950.2 737788 740163 1 + 2376 FIG00898232: hypothetical protein - none -
fig|6666666.148659.peg.655 CDS NC_002950.2 740256 740915 3 + 660 ABC transporter ATP-binding protein - none -
fig|6666666.148659.peg.656 CDS NC_002950.2 742774 741221 -1 - 1554 FIG00936050: hypothetical protein - none -
fig|6666666.148659.peg.657 CDS NC_002950.2 744613 743258 -1 - 1356 Succinate-semialdehyde dehydrogenase, CoA-dependent - none -
fig|6666666.148659.peg.658 CDS NC_002950.2 745923 744808 -3 - 1116 NAD-dependent 4-hydroxybutyrate dehydrogenase (EC 1.1.1.61) - none -
fig|6666666.148659.peg.659 CDS NC_002950.2 747269 745974 -2 - 1296 4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-) - none -
fig|6666666.148659.peg.660 CDS NC_002950.2 747559 747275 -1 - 285 hypothetical protein - none -
fig|6666666.148659.peg.661 CDS NC_002950.2 749089 747632 -1 - 1458 4-hydroxybutanoyl-CoA dehydratase (EC 4.2.1.-) / Vinylacetyl-CoA Delta-isomerase (EC 5.3.3.3) - none -
fig|6666666.148659.peg.662 CDS NC_002950.2 750842 749793 -2 - 1050 immunoreactive 42 kDa antigen PG33 - none -
fig|6666666.148659.peg.663 CDS NC_002950.2 752157 750982 -3 - 1176 immunoreactive 43 kDa antigen PG32 - none -
fig|6666666.148659.peg.664 CDS NC_002950.2 752441 752316 -2 - 126 hypothetical protein - none -
fig|6666666.148659.peg.665 CDS NC_002950.2 753416 752463 -2 - 954 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148659.peg.666 CDS NC_002950.2 756048 753478 -3 - 2571 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.148659.peg.667 CDS NC_002950.2 756058 756189 1 + 132 hypothetical protein - none -
fig|6666666.148659.peg.668 CDS NC_002950.2 756651 757187 3 + 537 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.669 CDS NC_002950.2 757240 758277 1 + 1038 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.670 CDS NC_002950.2 758284 759066 1 + 783 Cobalamin synthase (EC 2.7.8.26) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.671 CDS NC_002950.2 759068 759607 2 + 540 Alpha-ribazole-5@1-phosphate phosphatase (EC 3.1.3.73) Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Phosphoglycerate mutase protein family
fig|6666666.148659.peg.672 CDS NC_002950.2 759669 760493 3 + 825 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.148659.peg.673 CDS NC_002950.2 760511 760942 2 + 432 FIG00935976: hypothetical protein - none -
fig|6666666.148659.peg.674 CDS NC_002950.2 763722 761176 -3 - 2547 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.148659.peg.675 CDS NC_002950.2 764718 763888 -3 - 831 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.148659.peg.676 CDS NC_002950.2 765519 764746 -3 - 774 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.148659.peg.677 CDS NC_002950.2 766124 765537 -2 - 588 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.148659.peg.678 CDS NC_002950.2 766210 766341 1 + 132 hypothetical protein - none -
fig|6666666.148659.peg.679 CDS NC_002950.2 767221 766874 -1 - 348 hypothetical protein - none -
fig|6666666.148659.peg.680 CDS NC_002950.2 767839 767243 -1 - 597 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.148659.peg.681 CDS NC_002950.2 767814 767945 3 + 132 hypothetical protein - none -
fig|6666666.148659.peg.682 CDS NC_002950.2 768755 768015 -2 - 741 Cytoplasmic copper homeostasis protein CutC Copper homeostasis: copper tolerance
fig|6666666.148659.peg.683 CDS NC_002950.2 769686 768766 -3 - 921 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.148659.peg.684 CDS NC_002950.2 769720 770109 1 + 390 FIG00935949: hypothetical protein - none -
fig|6666666.148659.peg.685 CDS NC_002950.2 771184 770081 -1 - 1104 hypothetical protein - none -
fig|6666666.148659.peg.686 CDS NC_002950.2 771663 771226 -3 - 438 putative periplasmic protein - none -
fig|6666666.148659.peg.687 CDS NC_002950.2 773039 771786 -2 - 1254 sensor histidine kinase - none -
fig|6666666.148659.peg.688 CDS NC_002950.2 773755 773066 -1 - 690 DNA-binding response regulator - none -
fig|6666666.148659.peg.689 CDS NC_002950.2 773987 774595 2 + 609 NLP/P60 family protein - none -
fig|6666666.148659.peg.690 CDS NC_002950.2 774751 774602 -1 - 150 hypothetical protein - none -
fig|6666666.148659.peg.691 CDS NC_002950.2 774981 774829 -3 - 153 hypothetical protein - none -
fig|6666666.148659.peg.692 CDS NC_002950.2 775282 777315 1 + 2034 prolyl oligopeptidase family protein - none -
fig|6666666.148659.peg.693 CDS NC_002950.2 777400 778026 1 + 627 hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.148659.peg.694 CDS NC_002950.2 778512 778093 -3 - 420 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148659.peg.695 CDS NC_002950.2 779891 778731 -2 - 1161 FIG00938859: hypothetical protein - none -
fig|6666666.148659.peg.696 CDS NC_002950.2 780908 779916 -2 - 993 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.148659.peg.697 CDS NC_002950.2 782096 780975 -2 - 1122 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.148659.peg.698 CDS NC_002950.2 782766 782110 -3 - 657 FIG00938099: hypothetical protein - none -
fig|6666666.148659.peg.699 CDS NC_002950.2 782941 783078 1 + 138 hypothetical protein - none -
fig|6666666.148659.peg.700 CDS NC_002950.2 783314 783916 2 + 603 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.148659.peg.701 CDS NC_002950.2 783913 784464 1 + 552 Nitroreductase family protein - none -
fig|6666666.148659.peg.702 CDS NC_002950.2 784523 785737 2 + 1215 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.148659.peg.703 CDS NC_002950.2 785748 786353 3 + 606 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.148659.peg.704 CDS NC_002950.2 786421 786606 1 + 186 FIG00936045: hypothetical protein - none -
fig|6666666.148659.peg.705 CDS NC_002950.2 786603 787055 3 + 453 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing
fig|6666666.148659.peg.706 CDS NC_002950.2 787078 788001 1 + 924 Ribonuclease Z (EC 3.1.26.11) tRNA processing
fig|6666666.148659.peg.707 CDS NC_002950.2 788024 788545 2 + 522 NLP/P60 family protein - none -
fig|6666666.148659.peg.708 CDS NC_002950.2 788953 788807 -1 - 147 hypothetical protein - none -
fig|6666666.148659.peg.709 CDS NC_002950.2 790727 789390 -2 - 1338 ATP binding protein - none -
fig|6666666.148659.peg.710 CDS NC_002950.2 791987 791223 -2 - 765 tRNA (guanosine(18)-2@1-O)-methyltransferase (EC 2.1.1.34) RNA methylation;
tRNA modification Bacteria
fig|6666666.148659.peg.711 CDS NC_002950.2 792470 792072 -2 - 399 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions
fig|6666666.148659.peg.712 CDS NC_002950.2 793963 792626 -1 - 1338 sensor histidine kinase - none -
fig|6666666.148659.peg.713 CDS NC_002950.2 795384 793990 -3 - 1395 Two-component system response regulator - none -
fig|6666666.148659.peg.714 CDS NC_002950.2 795744 795628 -3 - 117 hypothetical protein - none -
fig|6666666.148659.peg.715 CDS NC_002950.2 796782 796036 -3 - 747 Glycosyl transferase, group 2 family protein - none -
fig|6666666.148659.peg.716 CDS NC_002950.2 797668 796934 -1 - 735 PorT protein - none -
fig|6666666.148659.peg.717 CDS NC_002950.2 797807 798457 2 + 651 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.148659.peg.718 CDS NC_002950.2 798441 800348 3 + 1908 putative collagenase - none -
fig|6666666.148659.peg.719 CDS NC_002950.2 800616 800473 -3 - 144 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.720 CDS NC_002950.2 801083 803449 2 + 2367 DNA topoisomerase I (EC 5.99.1.2) Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.148659.peg.721 CDS NC_002950.2 803453 804211 2 + 759 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.148659.peg.722 CDS NC_002950.2 805763 804411 -2 - 1353 FIG00936650: hypothetical protein - none -
fig|6666666.148659.peg.723 CDS NC_002950.2 806460 805813 -3 - 648 hypothetical protein - none -
fig|6666666.148659.peg.724 CDS NC_002950.2 808683 806557 -3 - 2127 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.148659.peg.725 CDS NC_002950.2 810860 808722 -2 - 2139 FIG00935638: hypothetical protein - none -
fig|6666666.148659.peg.726 CDS NC_002950.2 811769 811059 -2 - 711 Mobile element protein - none -
fig|6666666.148659.peg.727 CDS NC_002950.2 812140 811784 -1 - 357 Mobile element protein - none -
fig|6666666.148659.peg.728 CDS NC_002950.2 812899 814275 1 + 1377 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.148659.peg.729 CDS NC_002950.2 814830 815186 3 + 357 Mobile element protein - none -
fig|6666666.148659.peg.730 CDS NC_002950.2 815201 815911 2 + 711 Mobile element protein - none -
fig|6666666.148659.peg.731 CDS NC_002950.2 815936 816157 2 + 222 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.732 CDS NC_002950.2 818495 816264 -2 - 2232 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.148659.peg.733 CDS NC_002950.2 821340 818647 -3 - 2694 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.148659.peg.734 CDS NC_002950.2 822471 821365 -3 - 1107 FIG00935657: hypothetical protein - none -
fig|6666666.148659.peg.735 CDS NC_002950.2 824252 822645 -2 - 1608 fibronectin type III domain protein - none -
fig|6666666.148659.peg.736 CDS NC_002950.2 824665 824249 -1 - 417 fibronectin type III domain protein - none -
fig|6666666.148659.peg.737 CDS NC_002950.2 825271 825408 1 + 138 hypothetical protein - none -
fig|6666666.148659.peg.738 CDS NC_002950.2 827031 825787 -3 - 1245 FIG00936174: hypothetical protein - none -
fig|6666666.148659.peg.739 CDS NC_002950.2 829243 827522 -1 - 1722 Acyl-CoA dehydrogenase (EC 1.3.8.7) - none -
fig|6666666.148659.peg.740 CDS NC_002950.2 830274 829255 -3 - 1020 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate;
Lysine fermentation
fig|6666666.148659.peg.741 CDS NC_002950.2 831149 830283 -2 - 867 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate;
Lysine fermentation
fig|6666666.148659.peg.742 CDS NC_002950.2 831959 831240 -2 - 720 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.148659.peg.743 CDS NC_002950.2 832663 832190 -1 - 474 FIG00935740: hypothetical protein - none -
fig|6666666.148659.peg.744 CDS NC_002950.2 833293 832679 -1 - 615 Biopolymer transport exbD protein. - none -
fig|6666666.148659.peg.745 CDS NC_002950.2 833799 833329 -3 - 471 FIG00936036: hypothetical protein - none -
fig|6666666.148659.peg.746 CDS NC_002950.2 834620 833808 -2 - 813 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.148659.peg.747 CDS NC_002950.2 835771 834968 -1 - 804 Putative deoxyribonuclease YcfH YcfH
fig|6666666.148659.peg.748 CDS NC_002950.2 836819 835842 -2 - 978 Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.148659.peg.749 CDS NC_002950.2 837682 836990 -1 - 693 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.148659.peg.750 CDS NC_002950.2 837782 837660 -2 - 123 hypothetical protein - none -
fig|6666666.148659.peg.751 CDS NC_002950.2 837815 838057 2 + 243 FIG00935549: hypothetical protein - none -
fig|6666666.148659.peg.752 CDS NC_002950.2 840751 838133 -1 - 2619 FIG00936488: hypothetical protein - none -
fig|6666666.148659.peg.753 CDS NC_002950.2 841508 840792 -2 - 717 FIG00935912: hypothetical protein - none -
fig|6666666.148659.peg.754 CDS NC_002950.2 842673 841489 -3 - 1185 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.148659.peg.755 CDS NC_002950.2 843267 842683 -3 - 585 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.148659.peg.756 CDS NC_002950.2 843813 843268 -3 - 546 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.148659.peg.757 CDS NC_002950.2 844398 846395 3 + 1998 Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.148659.peg.758 CDS NC_002950.2 846551 848911 2 + 2361 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.148659.peg.759 CDS NC_002950.2 848953 849663 1 + 711 FIG005935: membrane protein - none -
fig|6666666.148659.peg.760 CDS NC_002950.2 852540 849763 -3 - 2778 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.148659.peg.761 CDS NC_002950.2 852637 852801 1 + 165 hypothetical protein - none -
fig|6666666.148659.peg.762 CDS NC_002950.2 852985 853887 1 + 903 Mobile element protein - none -
fig|6666666.148659.peg.763 CDS NC_002950.2 854474 854659 2 + 186 hypothetical protein - none -
fig|6666666.148659.peg.764 CDS NC_002950.2 856368 854809 -3 - 1560 NAD-utilizing dehydrogenases - none -
fig|6666666.148659.peg.765 CDS NC_002950.2 857804 856353 -2 - 1452 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.148659.peg.766 CDS NC_002950.2 858188 857958 -2 - 231 Mobile element protein - none -
fig|6666666.148659.peg.767 CDS NC_002950.2 859812 858463 -3 - 1350 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system;
TCA Cycle
fig|6666666.148659.peg.768 CDS NC_002950.2 860608 859817 -1 - 792 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) - none -
fig|6666666.148659.peg.769 CDS NC_002950.2 861858 860647 -3 - 1212 Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26) - none -
fig|6666666.148659.peg.770 CDS NC_002950.2 862740 861889 -3 - 852 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.148659.peg.771 CDS NC_002950.2 863682 862777 -3 - 906 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.148659.peg.772 CDS NC_002950.2 864814 863720 -1 - 1095 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.148659.peg.773 CDS NC_002950.2 864928 864815 -1 - 114 hypothetical protein - none -
fig|6666666.148659.peg.774 CDS NC_002950.2 872104 865154 -1 - 6951 FIG00935527: hypothetical protein - none -
fig|6666666.148659.peg.775 CDS NC_002950.2 872651 872067 -2 - 585 FIG00935527: hypothetical protein - none -
fig|6666666.148659.peg.776 CDS NC_002950.2 873299 872691 -2 - 609 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.148659.peg.777 CDS NC_002950.2 873915 873736 -3 - 180 Mobile element protein - none -
fig|6666666.148659.peg.778 CDS NC_002950.2 874162 873938 -1 - 225 Mobile element protein - none -
fig|6666666.148659.peg.779 CDS NC_002950.2 874751 874251 -2 - 501 Mobile element protein - none -
fig|6666666.148659.peg.780 CDS NC_002950.2 875588 874839 -2 - 750 Mobile element protein - none -
fig|6666666.148659.peg.781 CDS NC_002950.2 876341 875994 -2 - 348 FIG00937927: hypothetical protein - none -
fig|6666666.148659.peg.782 CDS NC_002950.2 876949 876476 -1 - 474 FIG00937108: hypothetical protein - none -
fig|6666666.148659.peg.783 CDS NC_002950.2 877150 876983 -1 - 168 Transposase - none -
fig|6666666.148659.peg.784 CDS NC_002950.2 877466 878695 2 + 1230 Mobile element protein - none -
fig|6666666.148659.peg.785 CDS NC_002950.2 878721 879923 3 + 1203 Mobile element protein - none -
fig|6666666.148659.peg.786 CDS NC_002950.2 879996 880292 3 + 297 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148659.peg.787 CDS NC_002950.2 880825 880418 -1 - 408 hypothetical protein - none -
fig|6666666.148659.peg.788 CDS NC_002950.2 880958 881272 2 + 315 Transcriptional regulator, HxlR family - none -
fig|6666666.148659.peg.789 CDS NC_002950.2 882128 881997 -2 - 132 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.790 CDS NC_002950.2 883238 882153 -2 - 1086 Mobile element protein - none -
fig|6666666.148659.peg.791 CDS NC_002950.2 883361 884209 2 + 849 transcriptional regulator, AraC family - none -
fig|6666666.148659.peg.792 CDS NC_002950.2 884306 885664 2 + 1359 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.148659.peg.793 CDS NC_002950.2 885956 886276 2 + 321 tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.148659.peg.794 CDS NC_002950.2 886719 886360 -3 - 360 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.795 CDS NC_002950.2 887408 887536 2 + 129 hypothetical protein - none -
fig|6666666.148659.peg.796 CDS NC_002950.2 887543 887971 2 + 429 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.797 CDS NC_002950.2 888085 887963 -1 - 123 hypothetical protein - none -
fig|6666666.148659.peg.798 CDS NC_002950.2 889798 888770 -1 - 1029 Lmo0572 protein - none -
fig|6666666.148659.peg.799 CDS NC_002950.2 891663 889798 -3 - 1866 plasmid-related protein - none -
fig|6666666.148659.peg.800 CDS NC_002950.2 893350 892088 -1 - 1263 hypothetical protein - none -
fig|6666666.148659.peg.801 CDS NC_002950.2 893720 893857 2 + 138 hypothetical protein - none -
fig|6666666.148659.peg.802 CDS NC_002950.2 895133 894084 -2 - 1050 Transposase - none -
fig|6666666.148659.peg.803 CDS NC_002950.2 895617 896915 3 + 1299 Integrase - none -
fig|6666666.148659.peg.804 CDS NC_002950.2 897353 898534 2 + 1182 metallo-beta-lactamase family protein - none -
fig|6666666.148659.peg.805 CDS NC_002950.2 898512 902543 3 + 4032 hypothetical protein - none -
fig|6666666.148659.peg.806 CDS NC_002950.2 903764 902871 -2 - 894 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.148659.peg.807 CDS NC_002950.2 904964 903900 -2 - 1065 FIG00938084: hypothetical protein - none -
fig|6666666.148659.peg.808 CDS NC_002950.2 905272 904961 -1 - 312 FIG00938167: hypothetical protein - none -
fig|6666666.148659.peg.810 CDS NC_002950.2 906625 905915 -1 - 711 Mobile element protein - none -
fig|6666666.148659.peg.811 CDS NC_002950.2 906996 906640 -3 - 357 Mobile element protein - none -
fig|6666666.148659.peg.812 CDS NC_002950.2 907656 907018 -3 - 639 Mobile element protein - none -
fig|6666666.148659.peg.813 CDS NC_002950.2 907933 909474 1 + 1542 putative DNA methylase - none -
fig|6666666.148659.peg.814 CDS NC_002950.2 910529 909579 -2 - 951 FIG00936210: hypothetical protein - none -
fig|6666666.148659.peg.815 CDS NC_002950.2 911269 910562 -1 - 708 FIG00935812: hypothetical protein - none -
fig|6666666.148659.peg.816 CDS NC_002950.2 911533 911360 -1 - 174 DNA binding protein, excisionase family, putative - none -
fig|6666666.148659.peg.817 CDS NC_002950.2 912822 911656 -3 - 1167 Toprim domain protein CBSS-315749.4.peg.3658
fig|6666666.148659.peg.818 CDS NC_002950.2 913013 913369 2 + 357 Mobile element protein - none -
fig|6666666.148659.peg.819 CDS NC_002950.2 913384 914094 1 + 711 Mobile element protein - none -
fig|6666666.148659.peg.820 CDS NC_002950.2 914119 914289 1 + 171 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.821 CDS NC_002950.2 914524 915009 1 + 486 DNA-binding protein, histone-like family - none -
fig|6666666.148659.peg.822 CDS NC_002950.2 915046 915828 1 + 783 Phage protein - none -
fig|6666666.148659.peg.823 CDS NC_002950.2 916330 917235 1 + 906 Abort lactococcal phage infection AbiTii - none -
fig|6666666.148659.peg.824 CDS NC_002950.2 917459 917683 2 + 225 transcriptional regulator, putative - none -
fig|6666666.148659.peg.825 CDS NC_002950.2 917680 918015 1 + 336 hypothetical protein - none -
fig|6666666.148659.peg.826 CDS NC_002950.2 918140 918943 2 + 804 HipA protein Persister Cells
fig|6666666.148659.peg.827 CDS NC_002950.2 919028 919333 2 + 306 transcriptional regulator, putative - none -
fig|6666666.148659.peg.828 CDS NC_002950.2 919387 922869 1 + 3483 FIG003033: Helicase domain protein - none -
fig|6666666.148659.peg.829 CDS NC_002950.2 922880 926278 2 + 3399 putative type IIS restriction/modification enzyme - none -
fig|6666666.148659.peg.830 CDS NC_002950.2 926603 926268 -2 - 336 hypothetical protein - none -
fig|6666666.148659.peg.831 CDS NC_002950.2 927759 927139 -3 - 621 serine type site-specific recombinase - none -
fig|6666666.148659.peg.832 CDS NC_002950.2 928986 927856 -3 - 1131 Mobile element protein - none -
fig|6666666.148659.peg.833 CDS NC_002950.2 929123 930268 2 + 1146 hypothetical protein - none -
fig|6666666.148659.peg.834 CDS NC_002950.2 931023 930328 -3 - 696 hypothetical protein - none -
fig|6666666.148659.peg.835 CDS NC_002950.2 931943 931020 -2 - 924 mobilization protein - none -
fig|6666666.148659.peg.836 CDS NC_002950.2 932380 931940 -1 - 441 mobilization protein - none -
fig|6666666.148659.peg.837 CDS NC_002950.2 933452 932394 -2 - 1059 FIG00897215: hypothetical protein - none -
fig|6666666.148659.peg.838 CDS NC_002950.2 934926 933550 -3 - 1377 hypothetical protein - none -
fig|6666666.148659.peg.839 CDS NC_002950.2 935295 934936 -3 - 360 mobilizable transposon, xis protein - none -
fig|6666666.148659.peg.840 CDS NC_002950.2 935944 936162 1 + 219 hypothetical protein - none -
fig|6666666.148659.peg.841 CDS NC_002950.2 936838 936200 -1 - 639 Mobilizable transposon, tnpC protein - none -
fig|6666666.148659.peg.842 CDS NC_002950.2 938103 937000 -3 - 1104 mobilizable transposon, int protein - none -
fig|6666666.148659.peg.843 CDS NC_002950.2 938758 938192 -1 - 567 mobilizable transposon, tnpA protein - none -
fig|6666666.148659.peg.844 CDS NC_002950.2 940764 939340 -3 - 1425 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.148659.peg.845 CDS NC_002950.2 941839 940928 -1 - 912 GldB - none -
fig|6666666.148659.peg.846 CDS NC_002950.2 942554 942021 -2 - 534 Mobile element protein - none -
fig|6666666.148659.peg.847 CDS NC_002950.2 942679 943182 1 + 504 Thiol peroxidase, Bcp-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.148659.peg.848 CDS NC_002950.2 943203 944225 3 + 1023 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.148659.peg.849 CDS NC_002950.2 944299 945264 1 + 966 FIG00936209: hypothetical protein - none -
fig|6666666.148659.peg.850 CDS NC_002950.2 945261 946622 3 + 1362 FIG00935947: hypothetical protein - none -
fig|6666666.148659.peg.851 CDS NC_002950.2 946619 947869 2 + 1251 FIG00936153: hypothetical protein - none -
fig|6666666.148659.peg.852 CDS NC_002950.2 947885 948985 2 + 1101 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) / Chorismate mutase I (EC 5.4.99.5) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.148659.peg.853 CDS NC_002950.2 948982 949746 1 + 765 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.148659.peg.854 CDS NC_002950.2 950055 949861 -3 - 195 hypothetical protein - none -
fig|6666666.148659.peg.855 CDS NC_002950.2 950240 951436 2 + 1197 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.148659.peg.856 CDS NC_002950.2 951472 953163 1 + 1692 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.148659.peg.857 CDS NC_002950.2 953904 953731 -3 - 174 hypothetical protein - none -
fig|6666666.148659.peg.858 CDS NC_002950.2 955943 954291 -2 - 1653 Hydroxylamine reductase (EC 1.7.-.-) Nitrosative stress
fig|6666666.148659.peg.859 CDS NC_002950.2 956956 956168 -1 - 789 DNA repair protein RadC Bacterial cell division cluster;
DNA repair, bacterial
fig|6666666.148659.peg.860 CDS NC_002950.2 957389 960442 2 + 3054 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.148659.peg.861 CDS NC_002950.2 962652 960958 -3 - 1695 Alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.148659.peg.862 CDS NC_002950.2 963440 962649 -2 - 792 FIG00936064: hypothetical protein - none -
fig|6666666.148659.peg.863 CDS NC_002950.2 964750 963587 -1 - 1164 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.148659.peg.864 CDS NC_002950.2 966385 964796 -1 - 1590 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.148659.peg.865 CDS NC_002950.2 966653 966405 -2 - 249 FIG00936158: hypothetical protein - none -
fig|6666666.148659.peg.866 CDS NC_002950.2 969103 966836 -1 - 2268 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.148659.peg.867 CDS NC_002950.2 969634 969188 -1 - 447 Pyruvoyl-dependent arginine decarboxylase 1 (EC 4.1.1.19) - none -
fig|6666666.148659.peg.868 CDS NC_002950.2 969749 969910 2 + 162 hypothetical protein - none -
fig|6666666.148659.peg.869 CDS NC_002950.2 970503 970384 -3 - 120 hypothetical protein - none -
fig|6666666.148659.peg.870 CDS NC_002950.2 970756 971208 1 + 453 hypothetical protein - none -
fig|6666666.148659.peg.871 CDS NC_002950.2 971811 971320 -3 - 492 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.148659.peg.872 CDS NC_002950.2 973129 971828 -1 - 1302 Putative inner membrane protein - none -
fig|6666666.148659.peg.873 CDS NC_002950.2 973756 973184 -1 - 573 FHA domain protein - none -
fig|6666666.148659.peg.874 CDS NC_002950.2 975446 973881 -2 - 1566 O-antigen flippase Wzx KDO2-Lipid A biosynthesis
fig|6666666.148659.peg.875 CDS NC_002950.2 975777 975475 -3 - 303 hypothetical protein - none -
fig|6666666.148659.peg.876 CDS NC_002950.2 976507 975794 -1 - 714 hypothetical protein - none -
fig|6666666.148659.peg.877 CDS NC_002950.2 976737 977117 3 + 381 hypothetical protein - none -
fig|6666666.148659.peg.878 CDS NC_002950.2 977633 977505 -2 - 129 hypothetical protein - none -
fig|6666666.148659.peg.879 CDS NC_002950.2 978187 977792 -1 - 396 GtrA family protein - none -
fig|6666666.148659.peg.880 CDS NC_002950.2 978908 978153 -2 - 756 hypothetical protein - none -
fig|6666666.148659.peg.881 CDS NC_002950.2 980424 979075 -3 - 1350 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.148659.peg.882 CDS NC_002950.2 981172 980435 -1 - 738 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.148659.peg.883 CDS NC_002950.2 982442 981318 -2 - 1125 Lipoprotein releasing system transmembrane protein LolC Lipoprotein sorting system
fig|6666666.148659.peg.884 CDS NC_002950.2 982904 982569 -2 - 336 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.148659.peg.885 CDS NC_002950.2 983758 982943 -1 - 816 Acid phosphatase (EC 3.1.3.2) - none -
fig|6666666.148659.peg.886 CDS NC_002950.2 984369 983755 -3 - 615 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.148659.peg.887 CDS NC_002950.2 984724 984497 -1 - 228 FIG00936027: hypothetical protein - none -
fig|6666666.148659.peg.888 CDS NC_002950.2 985140 984724 -3 - 417 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA YjeE
fig|6666666.148659.peg.889 CDS NC_002950.2 986708 985152 -2 - 1557 Response regulator - none -
fig|6666666.148659.peg.890 CDS NC_002950.2 986924 986757 -2 - 168 hypothetical protein - none -
fig|6666666.148659.peg.891 CDS NC_002950.2 987566 987243 -2 - 324 FIG00935959: hypothetical protein - none -
fig|6666666.148659.peg.892 CDS NC_002950.2 988353 987640 -3 - 714 FIG00936453: hypothetical protein - none -
fig|6666666.148659.peg.893 CDS NC_002950.2 988748 989893 2 + 1146 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.148659.peg.894 CDS NC_002950.2 989949 990065 3 + 117 hypothetical protein - none -
fig|6666666.148659.peg.895 CDS NC_002950.2 990137 992296 2 + 2160 Translation elongation factor G-related protein Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.148659.peg.896 CDS NC_002950.2 994408 992504 -1 - 1905 putative Fe-S oxidoreductase - none -
fig|6666666.148659.peg.897 CDS NC_002950.2 995211 994387 -3 - 825 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.148659.peg.898 CDS NC_002950.2 996541 995240 -1 - 1302 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.148659.peg.899 CDS NC_002950.2 997284 996562 -3 - 723 FIG00935511: hypothetical protein - none -
fig|6666666.148659.peg.900 CDS NC_002950.2 1000040 997284 -2 - 2757 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.901 CDS NC_002950.2 1001210 1000500 -2 - 711 Mobile element protein - none -
fig|6666666.148659.peg.902 CDS NC_002950.2 1001581 1001225 -1 - 357 Mobile element protein - none -
fig|6666666.148659.peg.903 CDS NC_002950.2 1002401 1002598 2 + 198 ISPg5, transposase Orf1 - none -
fig|6666666.148659.peg.904 CDS NC_002950.2 1002802 1003590 1 + 789 Mobile element protein - none -
fig|6666666.148659.peg.905 CDS NC_002950.2 1004952 1004410 -3 - 543 Mobile element protein - none -
fig|6666666.148659.peg.906 CDS NC_002950.2 1006486 1005194 -1 - 1293 ABC transporter, permease protein, putative - none -
fig|6666666.148659.peg.907 CDS NC_002950.2 1007486 1006527 -2 - 960 ABC transporter, ATP-binding protein - none -
fig|6666666.148659.peg.908 CDS NC_002950.2 1007905 1007489 -1 - 417 FIG00936304: hypothetical protein - none -
fig|6666666.148659.peg.909 CDS NC_002950.2 1008031 1008807 1 + 777 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.148659.peg.910 CDS NC_002950.2 1008826 1009833 1 + 1008 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.148659.peg.911 CDS NC_002950.2 1010001 1010381 3 + 381 Glycine cleavage system H protein CBSS-315749.4.peg.3658;
Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.148659.peg.912 CDS NC_002950.2 1010382 1010888 3 + 507 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.148659.peg.913 CDS NC_002950.2 1011062 1012807 2 + 1746 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.148659.peg.914 CDS NC_002950.2 1012864 1013298 1 + 435 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.148659.peg.915 CDS NC_002950.2 1013326 1015065 1 + 1740 FIG00898077: hypothetical protein - none -
fig|6666666.148659.peg.916 CDS NC_002950.2 1015065 1015925 3 + 861 FIG00935705: hypothetical protein - none -
fig|6666666.148659.peg.917 CDS NC_002950.2 1015937 1017232 2 + 1296 peptidase, M23/M37 family, putative - none -
fig|6666666.148659.peg.918 CDS NC_002950.2 1017220 1018191 1 + 972 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.148659.peg.919 CDS NC_002950.2 1019607 1018225 -3 - 1383 Inner membrane protein YihY, formerly thought to be RNase BN LMPTP YfkJ cluster;
Riboflavin synthesis cluster
fig|6666666.148659.peg.920 CDS NC_002950.2 1019752 1019639 -1 - 114 hypothetical protein - none -
fig|6666666.148659.peg.921 CDS NC_002950.2 1021231 1020113 -1 - 1119 Septum site-determining protein MinD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
Septum site-determining cluster Min
fig|6666666.148659.peg.922 CDS NC_002950.2 1022024 1021251 -2 - 774 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation;
tRNA modification Bacteria
fig|6666666.148659.peg.923 CDS NC_002950.2 1022362 1022033 -1 - 330 FIG00897068: hypothetical protein - none -
fig|6666666.148659.peg.924 CDS NC_002950.2 1023898 1022417 -1 - 1482 Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type tRNA aminoacylation, Pro
fig|6666666.148659.peg.925 CDS NC_002950.2 1023918 1024037 3 + 120 hypothetical protein - none -
fig|6666666.148659.peg.926 CDS NC_002950.2 1024422 1024177 -3 - 246 FIG00936628: hypothetical protein - none -
fig|6666666.148659.peg.927 CDS NC_002950.2 1025199 1024489 -3 - 711 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) - none -
fig|6666666.148659.peg.928 CDS NC_002950.2 1025827 1025201 -1 - 627 Phosphatidylserine decarboxylase (EC 4.1.1.65) - none -
fig|6666666.148659.peg.929 CDS NC_002950.2 1026182 1025985 -2 - 198 hypothetical protein - none -
fig|6666666.148659.peg.930 CDS NC_002950.2 1026968 1027885 2 + 918 Mrr restriction system protein - none -
fig|6666666.148659.peg.931 CDS NC_002950.2 1029508 1028291 -1 - 1218 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148659.peg.932 CDS NC_002950.2 1029746 1030903 2 + 1158 Mobile element protein - none -
fig|6666666.148659.peg.933 CDS NC_002950.2 1031494 1032801 1 + 1308 McrBC restriction endonuclease system, McrB subunit, putative - none -
fig|6666666.148659.peg.934 CDS NC_002950.2 1032808 1034103 1 + 1296 hypothetical protein - none -
fig|6666666.148659.peg.935 CDS NC_002950.2 1034307 1036622 3 + 2316 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.148659.peg.936 CDS NC_002950.2 1036702 1036932 1 + 231 hypothetical protein - none -
fig|6666666.148659.peg.937 CDS NC_002950.2 1037451 1038416 3 + 966 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.148659.peg.938 CDS NC_002950.2 1038466 1039407 1 + 942 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.148659.peg.939 CDS NC_002950.2 1039505 1040176 2 + 672 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.148659.peg.940 CDS NC_002950.2 1040173 1040922 1 + 750 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.148659.peg.941 CDS NC_002950.2 1041004 1043274 1 + 2271 FIG00936690: hypothetical protein - none -
fig|6666666.148659.peg.942 CDS NC_002950.2 1044405 1046702 3 + 2298 FIG00936324: hypothetical protein - none -
fig|6666666.148659.peg.943 CDS NC_002950.2 1047177 1046803 -3 - 375 hypothetical protein - none -
fig|6666666.148659.peg.944 CDS NC_002950.2 1047070 1047576 1 + 507 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.148659.peg.945 CDS NC_002950.2 1047566 1048126 2 + 561 FIG00935713: hypothetical protein - none -
fig|6666666.148659.peg.946 CDS NC_002950.2 1048142 1048918 2 + 777 FIG00936351: hypothetical protein - none -
fig|6666666.148659.peg.947 CDS NC_002950.2 1049668 1049243 -1 - 426 Mobile element protein - none -
fig|6666666.148659.peg.948 CDS NC_002950.2 1050257 1049757 -2 - 501 Mobile element protein - none -
fig|6666666.148659.peg.949 CDS NC_002950.2 1050249 1050914 3 + 666 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.950 CDS NC_002950.2 1051446 1051249 -3 - 198 LSU ribosomal protein L35p - none -
fig|6666666.148659.peg.951 CDS NC_002950.2 1052129 1051524 -2 - 606 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.148659.peg.952 CDS NC_002950.2 1054194 1052233 -3 - 1962 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.148659.peg.953 CDS NC_002950.2 1054709 1054575 -2 - 135 hypothetical protein - none -
fig|6666666.148659.peg.954 CDS NC_002950.2 1055675 1055559 -2 - 117 hypothetical protein - none -
fig|6666666.148659.peg.955 CDS NC_002950.2 1055732 1056640 2 + 909 Cell division inhibitor Slr1223 (YfcH in EC), contains epimerase/dehydratase and DUF1731 domains - none -
fig|6666666.148659.peg.956 CDS NC_002950.2 1056839 1057072 2 + 234 transcriptional regulator, putative - none -
fig|6666666.148659.peg.957 CDS NC_002950.2 1057734 1058366 3 + 633 hypothetical protein - none -
fig|6666666.148659.peg.958 CDS NC_002950.2 1058370 1058906 3 + 537 hypothetical protein - none -
fig|6666666.148659.peg.959 CDS NC_002950.2 1058923 1059297 1 + 375 hypothetical protein - none -
fig|6666666.148659.peg.960 CDS NC_002950.2 1059372 1060364 3 + 993 Bll2647 protein - none -
fig|6666666.148659.peg.961 CDS NC_002950.2 1062757 1060523 -1 - 2235 prolyl oligopeptidase family protein - none -
fig|6666666.148659.peg.962 CDS NC_002950.2 1063853 1063113 -2 - 741 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148659.peg.963 CDS NC_002950.2 1066550 1063884 -2 - 2667 putative TonB-dependent receptor - none -
fig|6666666.148659.peg.964 CDS NC_002950.2 1066979 1066608 -2 - 372 Transcriptional regulator, GntR family - none -
fig|6666666.148659.peg.965 CDS NC_002950.2 1067734 1066976 -1 - 759 FIG00936228: hypothetical protein - none -
fig|6666666.148659.peg.966 CDS NC_002950.2 1068585 1067731 -3 - 855 FIG00936394: hypothetical protein - none -
fig|6666666.148659.peg.967 CDS NC_002950.2 1069426 1068599 -1 - 828 ABC transporter, ATP-binding protein - none -
fig|6666666.148659.peg.968 CDS NC_002950.2 1069632 1069423 -3 - 210 hypothetical protein - none -
fig|6666666.148659.peg.969 CDS NC_002950.2 1069960 1070115 1 + 156 hypothetical protein - none -
fig|6666666.148659.peg.970 CDS NC_002950.2 1071570 1070179 -3 - 1392 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.148659.peg.971 CDS NC_002950.2 1071874 1073370 1 + 1497 acetyl-CoA hydrolase/transferase family protein - none -
fig|6666666.148659.peg.972 CDS NC_002950.2 1073996 1075915 2 + 1920 TPR domain protein - none -
fig|6666666.148659.peg.973 CDS NC_002950.2 1076110 1075967 -1 - 144 hypothetical protein - none -
fig|6666666.148659.peg.974 CDS NC_002950.2 1076278 1079004 1 + 2727 Pyruvate,phosphate dikinase (EC 2.7.9.1) Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.148659.peg.975 CDS NC_002950.2 1079034 1079342 3 + 309 hypothetical protein - none -
fig|6666666.148659.peg.976 CDS NC_002950.2 1079355 1080536 3 + 1182 FIG00936332: hypothetical protein - none -
fig|6666666.148659.peg.977 CDS NC_002950.2 1080708 1083518 3 + 2811 putative outer membrane receptor - none -
fig|6666666.148659.peg.978 CDS NC_002950.2 1083515 1085158 2 + 1644 FIG00935530: hypothetical protein - none -
fig|6666666.148659.peg.979 CDS NC_002950.2 1085800 1085201 -1 - 600 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.148659.peg.980 CDS NC_002950.2 1086757 1085807 -1 - 951 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.148659.peg.981 CDS NC_002950.2 1087024 1086866 -1 - 159 hypothetical protein - none -
fig|6666666.148659.peg.982 CDS NC_002950.2 1087281 1088369 3 + 1089 ABC transport protein, ATP-binding subunit - none -
fig|6666666.148659.peg.983 CDS NC_002950.2 1088374 1089048 1 + 675 hypothetical protein - none -
fig|6666666.148659.peg.984 CDS NC_002950.2 1089459 1091156 3 + 1698 Immunoreactive 53 kDa antigen PG123 - none -
fig|6666666.148659.peg.985 CDS NC_002950.2 1091220 1091396 3 + 177 hypothetical protein - none -
fig|6666666.148659.peg.986 CDS NC_002950.2 1091540 1092880 2 + 1341 hypothetical protein - none -
fig|6666666.148659.peg.987 CDS NC_002950.2 1093146 1092979 -3 - 168 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.988 CDS NC_002950.2 1094256 1093171 -3 - 1086 Mobile element protein - none -
fig|6666666.148659.peg.989 CDS NC_002950.2 1094473 1095375 1 + 903 Mobile element protein - none -
fig|6666666.148659.peg.990 CDS NC_002950.2 1095538 1096284 1 + 747 ABC-type transport system involved in resistance to organic solvents, permease component - none -
fig|6666666.148659.peg.991 CDS NC_002950.2 1096303 1097037 1 + 735 ABC transporter, ATP-binding protein - none -
fig|6666666.148659.peg.992 CDS NC_002950.2 1097132 1098505 2 + 1374 FIG00935900: hypothetical protein - none -
fig|6666666.148659.peg.993 CDS NC_002950.2 1098576 1101479 3 + 2904 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.148659.peg.994 CDS NC_002950.2 1101505 1102884 1 + 1380 FIG00935576: hypothetical protein - none -
fig|6666666.148659.peg.995 CDS NC_002950.2 1102884 1105181 3 + 2298 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.148659.peg.996 CDS NC_002950.2 1105224 1105346 3 + 123 hypothetical protein - none -
fig|6666666.148659.peg.997 CDS NC_002950.2 1107142 1105415 -1 - 1728 Dca - none -
fig|6666666.148659.peg.998 CDS NC_002950.2 1108039 1107575 -1 - 465 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine and Ornithine Degradation
fig|6666666.148659.peg.999 CDS NC_002950.2 1109013 1108060 -3 - 954 K+-dependent Na+/Ca+ exchanger related-protein - none -
fig|6666666.148659.peg.1000 CDS NC_002950.2 1110728 1109082 -2 - 1647 Glycogen - none -
fig|6666666.148659.peg.1001 CDS NC_002950.2 1112942 1110765 -2 - 2178 Ferrous iron transport protein B - none -
fig|6666666.148659.peg.1002 CDS NC_002950.2 1113908 1112976 -2 - 933 iron dependent repressor, putative - none -
fig|6666666.148659.peg.1003 CDS NC_002950.2 1115398 1116486 1 + 1089 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.148659.peg.1004 CDS NC_002950.2 1116527 1117405 2 + 879 Mce4/Rv3499c/MTV023.06c protein - none -
fig|6666666.148659.peg.1005 CDS NC_002950.2 1117451 1118308 2 + 858 FIG00936664: hypothetical protein - none -
fig|6666666.148659.peg.1006 CDS NC_002950.2 1118492 1118316 -2 - 177 hypothetical protein - none -
fig|6666666.148659.peg.1007 CDS NC_002950.2 1118398 1119765 1 + 1368 FIG00935626: hypothetical protein - none -
fig|6666666.148659.peg.1008 CDS NC_002950.2 1119830 1120186 2 + 357 transcriptional regulator, putative - none -
fig|6666666.148659.peg.1009 CDS NC_002950.2 1120205 1120891 2 + 687 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.148659.peg.1010 CDS NC_002950.2 1121192 1121079 -2 - 114 hypothetical protein - none -
fig|6666666.148659.peg.1011 CDS NC_002950.2 1122737 1121292 -2 - 1446 hypothetical protein - none -
fig|6666666.148659.peg.1012 CDS NC_002950.2 1123120 1123539 1 + 420 Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148659.peg.1013 CDS NC_002950.2 1123559 1124152 2 + 594 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148659.peg.1014 CDS NC_002950.2 1124174 1126192 2 + 2019 Outer membrane lipoprotein omp16 precursor Ton and Tol transport systems
fig|6666666.148659.peg.1015 CDS NC_002950.2 1126525 1126286 -1 - 240 Mobile element protein - none -
fig|6666666.148659.peg.1016 CDS NC_002950.2 1126798 1128507 1 + 1710 Putative carboxy-terminal processing protease (EC 3.4.21.102) - none -
fig|6666666.148659.peg.1017 CDS NC_002950.2 1129908 1128820 -3 - 1089 ISPg6, transposase - none -
fig|6666666.148659.peg.1018 CDS NC_002950.2 1130110 1129961 -1 - 150 hypothetical protein - none -
fig|6666666.148659.peg.1019 CDS NC_002950.2 1130421 1130588 3 + 168 hypothetical protein - none -
fig|6666666.148659.peg.1020 CDS NC_002950.2 1131196 1131636 1 + 441 transcriptional regulator, putative - none -
fig|6666666.148659.peg.1021 CDS NC_002950.2 1131688 1132485 1 + 798 Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.148659.peg.1022 CDS NC_002950.2 1132521 1133390 3 + 870 Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.148659.peg.1023 CDS NC_002950.2 1133661 1134305 3 + 645 Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) Acetyl-CoA fermentation to Butyrate;
Lysine fermentation;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.148659.peg.1024 CDS NC_002950.2 1134374 1134748 2 + 375 3-aminobutyryl-CoA ammonia-lyase (EC 4.3.1.14) Lysine fermentation
fig|6666666.148659.peg.1025 CDS NC_002950.2 1134776 1135597 2 + 822 3-keto-5-aminohexanoate cleavage enzyme Lysine fermentation
fig|6666666.148659.peg.1026 CDS NC_002950.2 1135639 1136682 1 + 1044 3,5-diaminohexanoate dehydrogenase (EC 1.4.1.11) Lysine fermentation
fig|6666666.148659.peg.1027 CDS NC_002950.2 1136769 1138019 3 + 1251 Lysine 2,3-aminomutase (EC 5.4.3.2) Lysine degradation;
Lysine fermentation
fig|6666666.148659.peg.1028 CDS NC_002950.2 1138118 1139116 2 + 999 hypothetical protein clustered with lysine fermentation genes - none -
fig|6666666.148659.peg.1029 CDS NC_002950.2 1139110 1140507 1 + 1398 MutS domain protein, family 2 DNA repair, bacterial MutL-MutS system
fig|6666666.148659.peg.1030 CDS NC_002950.2 1140535 1142106 1 + 1572 L-beta-lysine 5,6-aminomutase alpha subunit (EC 5.4.3.3) Lysine degradation;
Lysine fermentation
fig|6666666.148659.peg.1031 CDS NC_002950.2 1142103 1142894 3 + 792 L-beta-lysine 5,6-aminomutase beta subunit (EC 5.4.3.3) Lysine degradation;
Lysine fermentation
fig|6666666.148659.peg.1032 CDS NC_002950.2 1142918 1143580 2 + 663 Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) Acetyl-CoA fermentation to Butyrate;
Lysine fermentation;
Polyhydroxybutyrate metabolism
fig|6666666.148659.peg.1033 CDS NC_002950.2 1143667 1144764 1 + 1098 Butyryl-CoA dehydrogenase (EC 1.3.8.1) 5-FCL-like protein;
Acetyl-CoA fermentation to Butyrate;
Anaerobic respiratory reductases;
Lysine fermentation
fig|6666666.148659.peg.1034 CDS NC_002950.2 1144779 1145564 3 + 786 Electron transfer flavoprotein, beta subunit Acetyl-CoA fermentation to Butyrate;
Lysine fermentation
fig|6666666.148659.peg.1035 CDS NC_002950.2 1145578 1146585 1 + 1008 Electron transfer flavoprotein, alpha subunit Acetyl-CoA fermentation to Butyrate;
Lysine fermentation
fig|6666666.148659.peg.1036 CDS NC_002950.2 1146689 1147459 2 + 771 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) Acetyl-CoA fermentation to Butyrate;
Lysine fermentation;
Polyhydroxybutyrate metabolism
fig|6666666.148659.peg.1037 CDS NC_002950.2 1147506 1148351 3 + 846 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Acetyl-CoA fermentation to Butyrate;
Acetyl-CoA fermentation to Butyrate;
Lysine fermentation;
Polyhydroxybutyrate metabolism;
Polyhydroxybutyrate metabolism
fig|6666666.148659.peg.1038 CDS NC_002950.2 1149708 1148521 -3 - 1188 Acetate kinase (EC 2.7.2.1) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.148659.peg.1039 CDS NC_002950.2 1150962 1149763 -3 - 1200 Phosphate acetyltransferase (EC 2.3.1.8) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.148659.peg.1040 CDS NC_002950.2 1151831 1150983 -2 - 849 FIG00936374: hypothetical protein - none -
fig|6666666.148659.peg.1041 CDS NC_002950.2 1153075 1151972 -1 - 1104 thioredoxin family protein - none -
fig|6666666.148659.peg.1042 CDS NC_002950.2 1153403 1153591 2 + 189 hypothetical protein - none -
fig|6666666.148659.peg.1043 CDS NC_002950.2 1153780 1153917 1 + 138 hypothetical protein - none -
fig|6666666.148659.peg.1044 CDS NC_002950.2 1153945 1154880 1 + 936 COG1242: Predicted Fe-S oxidoreductase - none -
fig|6666666.148659.peg.1045 CDS NC_002950.2 1155495 1154932 -3 - 564 acetyltransferase, GNAT family - none -
fig|6666666.148659.peg.1046 CDS NC_002950.2 1156350 1155613 -3 - 738 Transcriptional regulatory protein rprY - none -
fig|6666666.148659.peg.1047 CDS NC_002950.2 1156919 1157155 2 + 237 hypothetical protein - none -
fig|6666666.148659.peg.1048 CDS NC_002950.2 1157109 1158152 3 + 1044 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.148659.peg.1049 CDS NC_002950.2 1158268 1158128 -1 - 141 hypothetical protein - none -
fig|6666666.148659.peg.1050 CDS NC_002950.2 1158243 1158839 3 + 597 FIG00936234: hypothetical protein - none -
fig|6666666.148659.peg.1051 CDS NC_002950.2 1158893 1160281 2 + 1389 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucosamine mutase (EC 5.4.2.10) Bacterial checkpoint-control-related cluster;
Mannose Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.148659.peg.1052 CDS NC_002950.2 1160326 1161762 1 + 1437 RNA methyltransferase, TrmA family - none -
fig|6666666.148659.peg.1053 CDS NC_002950.2 1161962 1162081 2 + 120 hypothetical protein - none -
fig|6666666.148659.peg.1054 CDS NC_002950.2 1162078 1163061 1 + 984 FIG00936670: hypothetical protein - none -
fig|6666666.148659.peg.1055 CDS NC_002950.2 1163097 1165568 3 + 2472 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) / Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
Pyruvate Alanine Serine Interconversions
fig|6666666.148659.peg.1056 CDS NC_002950.2 1167099 1165876 -3 - 1224 FIG00936368: hypothetical protein - none -
fig|6666666.148659.peg.1057 CDS NC_002950.2 1168258 1167434 -1 - 825 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.148659.peg.1058 CDS NC_002950.2 1169102 1168251 -2 - 852 FIG00935814: hypothetical protein - none -
fig|6666666.148659.peg.1059 CDS NC_002950.2 1170559 1169099 -1 - 1461 sodium/iodide co-transporter - none -
fig|6666666.148659.peg.1060 CDS NC_002950.2 1173598 1170950 -1 - 2649 hypothetical protein - none -
fig|6666666.148659.peg.1061 CDS NC_002950.2 1173745 1175049 1 + 1305 ATPase, AAA family - none -
fig|6666666.148659.peg.1062 CDS NC_002950.2 1175075 1175842 2 + 768 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.148659.peg.1063 CDS NC_002950.2 1177263 1175806 -3 - 1458 RNA polymerase sigma-54 factor RpoN Transcription initiation, bacterial sigma factors
fig|6666666.148659.peg.1064 CDS NC_002950.2 1178666 1177257 -2 - 1410 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.148659.peg.1065 CDS NC_002950.2 1178984 1180309 2 + 1326 hypothetical protein - none -
fig|6666666.148659.peg.1066 CDS NC_002950.2 1180506 1180375 -3 - 132 hypothetical protein - none -
fig|6666666.148659.peg.1067 CDS NC_002950.2 1181057 1180797 -2 - 261 hypothetical protein - none -
fig|6666666.148659.peg.1068 CDS NC_002950.2 1182663 1181515 -3 - 1149 Mobilization protein BmpH - none -
fig|6666666.148659.peg.1069 CDS NC_002950.2 1182716 1183297 2 + 582 hypothetical protein - none -
fig|6666666.148659.peg.1070 CDS NC_002950.2 1184183 1183506 -2 - 678 FIG00939562: hypothetical protein - none -
fig|6666666.148659.peg.1071 CDS NC_002950.2 1184801 1184205 -2 - 597 FIG00939562: hypothetical protein - none -
fig|6666666.148659.peg.1072 CDS NC_002950.2 1185616 1185227 -1 - 390 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148659.peg.1073 CDS NC_002950.2 1186836 1185613 -3 - 1224 Integrase - none -
fig|6666666.148659.peg.1074 CDS NC_002950.2 1187177 1187533 2 + 357 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.148659.peg.1075 CDS NC_002950.2 1187610 1188947 3 + 1338 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.148659.peg.1076 CDS NC_002950.2 1189071 1189961 3 + 891 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines
fig|6666666.148659.peg.1077 CDS NC_002950.2 1190255 1191601 2 + 1347 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog Multidrug Resistance Efflux Pumps
fig|6666666.148659.peg.1078 CDS NC_002950.2 1191768 1191577 -3 - 192 hypothetical protein - none -
fig|6666666.148659.peg.1079 CDS NC_002950.2 1194764 1192173 -2 - 2592 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.148659.peg.1080 CDS NC_002950.2 1194983 1195543 2 + 561 Flavodoxin Flavodoxin
fig|6666666.148659.peg.1081 CDS NC_002950.2 1197645 1196236 -3 - 1410 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.148659.peg.1082 CDS NC_002950.2 1198996 1197677 -1 - 1320 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.148659.peg.1083 CDS NC_002950.2 1200440 1199097 -2 - 1344 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.148659.peg.1084 CDS NC_002950.2 1201138 1200575 -1 - 564 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) - none -
fig|6666666.148659.peg.1085 CDS NC_002950.2 1201811 1201161 -2 - 651 FIG00936419: hypothetical protein - none -
fig|6666666.148659.peg.1086 CDS NC_002950.2 1203023 1201836 -2 - 1188 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.148659.peg.1087 CDS NC_002950.2 1203363 1203830 3 + 468 Transcriptional regulator, AsnC family - none -
fig|6666666.148659.peg.1088 CDS NC_002950.2 1203877 1205259 1 + 1383 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.148659.peg.1089 CDS NC_002950.2 1205538 1208090 3 + 2553 Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.148659.peg.1090 CDS NC_002950.2 1208289 1210190 3 + 1902 FIG00936306: hypothetical protein - none -
fig|6666666.148659.peg.1091 CDS NC_002950.2 1210432 1210280 -1 - 153 hypothetical protein - none -
fig|6666666.148659.peg.1092 CDS NC_002950.2 1211027 1210731 -2 - 297 hypothetical protein - none -
fig|6666666.148659.peg.1093 CDS NC_002950.2 1211052 1213682 3 + 2631 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.148659.peg.1094 CDS NC_002950.2 1213711 1214163 1 + 453 FIG00935954: hypothetical protein - none -
fig|6666666.148659.peg.1095 CDS NC_002950.2 1214490 1215431 3 + 942 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.148659.peg.1096 CDS NC_002950.2 1216000 1216614 1 + 615 bacterial sugar transferase - none -
fig|6666666.148659.peg.1097 CDS NC_002950.2 1218417 1216789 -3 - 1629 predicted protein - none -
fig|6666666.148659.peg.1098 CDS NC_002950.2 1219687 1218380 -1 - 1308 O-antigen flippase Wzx KDO2-Lipid A biosynthesis
fig|6666666.148659.peg.1099 CDS NC_002950.2 1220808 1219684 -3 - 1125 pigmentation and extracellular proteinase regulator - none -
fig|6666666.148659.peg.1100 CDS NC_002950.2 1222154 1221018 -2 - 1137 FIG00935582: hypothetical protein - none -
fig|6666666.148659.peg.1101 CDS NC_002950.2 1223134 1222265 -1 - 870 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster - none -
fig|6666666.148659.peg.1102 CDS NC_002950.2 1224324 1223131 -3 - 1194 glycosyl transferase, group 1 family protein - none -
fig|6666666.148659.peg.1103 CDS NC_002950.2 1225704 1224661 -3 - 1044 capsular polysaccharide biosynthesis protein Rhamnose containing glycans
fig|6666666.148659.peg.1104 CDS NC_002950.2 1227084 1225720 -3 - 1365 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.148659.peg.1105 CDS NC_002950.2 1227301 1227164 -1 - 138 hypothetical protein - none -
fig|6666666.148659.peg.1106 CDS NC_002950.2 1228291 1227332 -1 - 960 Peptide chain release factor 2 Programmed frameshift;
Translation termination factors bacterial
fig|6666666.148659.peg.1107 CDS NC_002950.2 1230398 1228572 -2 - 1827 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.148659.peg.1108 CDS NC_002950.2 1231358 1231209 -2 - 150 hypothetical protein - none -
fig|6666666.148659.peg.1109 CDS NC_002950.2 1231782 1232909 3 + 1128 putative glycosyltransferase - none -
fig|6666666.148659.peg.1110 CDS NC_002950.2 1233046 1233309 1 + 264 hypothetical protein - none -
fig|6666666.148659.peg.1111 CDS NC_002950.2 1233290 1234438 2 + 1149 Hypothetical oxidoreductase YqhD (EC 1.1.-.-) - none -
fig|6666666.148659.peg.1112 CDS NC_002950.2 1235263 1235066 -1 - 198 hypothetical protein - none -
fig|6666666.148659.peg.1113 CDS NC_002950.2 1235267 1235752 2 + 486 FIG00939976: hypothetical protein - none -
fig|6666666.148659.peg.1114 CDS NC_002950.2 1235992 1236891 1 + 900 ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.148659.peg.1115 CDS NC_002950.2 1236875 1237327 2 + 453 FIG00936131: hypothetical protein - none -
fig|6666666.148659.peg.1116 CDS NC_002950.2 1239096 1238047 -3 - 1050 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.1117 CDS NC_002950.2 1240078 1239071 -1 - 1008 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.1118 CDS NC_002950.2 1241423 1240071 -2 - 1353 Cobyric acid synthase (EC 6.3.5.10) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.1119 CDS NC_002950.2 1241566 1241420 -1 - 147 Cobyric acid synthase (EC 6.3.5.10) Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.1120 CDS NC_002950.2 1242129 1241563 -3 - 567 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) - none -
fig|6666666.148659.peg.1121 CDS NC_002950.2 1243471 1242152 -1 - 1320 Cobyrinic acid A,C-diamide synthase Cobalamin synthesis;
Coenzyme B12 biosynthesis
fig|6666666.148659.peg.1122 CDS NC_002950.2 1247604 1244197 -3 - 3408 FIG00935903: hypothetical protein - none -
fig|6666666.148659.peg.1123 CDS NC_002950.2 1248317 1247601 -2 - 717 FIG00935809: hypothetical protein - none -
fig|6666666.148659.peg.1124 CDS NC_002950.2 1248611 1248390 -2 - 222 FIG00935522: hypothetical protein - none -
fig|6666666.148659.peg.1125 CDS NC_002950.2 1248567 1248704 3 + 138 hypothetical protein - none -
fig|6666666.148659.peg.1126 CDS NC_002950.2 1249330 1250175 1 + 846 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.148659.peg.1127 CDS NC_002950.2 1250495 1251235 2 + 741 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.148659.peg.1128 CDS NC_002950.2 1251232 1252599 1 + 1368 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.148659.peg.1129 CDS NC_002950.2 1252605 1253189 3 + 585 Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518 Lactate utilization
fig|6666666.148659.peg.1130 CDS NC_002950.2 1253773 1253300 -1 - 474 thioesterase family protein - none -
fig|6666666.148659.peg.1131 CDS NC_002950.2 1253935 1254090 1 + 156 Mobile element protein - none -
fig|6666666.148659.peg.1132 CDS NC_002950.2 1255966 1254260 -1 - 1707 ABC transporter, ATP-binding protein, putative - none -
fig|6666666.148659.peg.1133 CDS NC_002950.2 1257734 1256013 -2 - 1722 ABC transporter ATP-binding protein - none -
fig|6666666.148659.peg.1134 CDS NC_002950.2 1257859 1257698 -1 - 162 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.1135 CDS NC_002950.2 1258969 1257884 -1 - 1086 Mobile element protein - none -
fig|6666666.148659.peg.1136 CDS NC_002950.2 1259110 1258991 -1 - 120 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.148659.peg.1137 CDS NC_002950.2 1260427 1259150 -1 - 1278 FIG00936125: hypothetical protein - none -
fig|6666666.148659.peg.1138 CDS NC_002950.2 1261222 1260431 -1 - 792 FIG00935715: hypothetical protein - none -
fig|6666666.148659.peg.1139 CDS NC_002950.2 1263705 1261300 -3 - 2406 Predicted exporter of the RND superfamily - none -
fig|6666666.148659.peg.1140 CDS NC_002950.2 1264345 1263746 -1 - 600 Transcriptional regulator, TetR family - none -
fig|6666666.148659.peg.1141 CDS NC_002950.2 1265058 1265192 3 + 135 hypothetical protein - none -
fig|6666666.148659.peg.1142 CDS NC_002950.2 1266960 1265425 -3 - 1536 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) - none -
fig|6666666.148659.peg.1143 CDS NC_002950.2 1267599 1266982 -3 - 618 FIG00936316: hypothetical protein - none -
fig|6666666.148659.peg.1144 CDS NC_002950.2 1267627 1267782 1 + 156 hypothetical protein - none -
fig|6666666.148659.peg.1145 CDS NC_002950.2 1269184 1267793 -1 - 1392 FIG00936287: hypothetical protein - none -
fig|6666666.148659.peg.1146 CDS NC_002950.2 1269904 1269659 -1 - 246 Mobile element protein - none -
fig|6666666.148659.peg.1147 CDS NC_002950.2 1270132 1272012 1 + 1881 ATPase involved in DNA repair - none -
fig|6666666.148659.peg.1148 CDS NC_002950.2 1272252 1273205 3 + 954 glycerate dehydrogenase - none -
fig|6666666.148659.peg.1149 CDS NC_002950.2 1273321 1273202 -1 - 120 hypothetical protein - none -
fig|6666666.148659.peg.1150 CDS NC_002950.2 1273450 1273623 1 + 174 hypothetical protein - none -
fig|6666666.148659.peg.1151 CDS NC_002950.2 1274119 1275267 1 + 1149 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148659.peg.1152 CDS NC_002950.2 1275540 1275364 -3 - 177 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.1153 CDS NC_002950.2 1276650 1275565 -3 - 1086 Mobile element protein - none -
fig|6666666.148659.peg.1154 CDS NC_002950.2 1276790 1277029 2 + 240 hypothetical protein - none -
fig|6666666.148659.peg.1155 CDS NC_002950.2 1277210 1277458 2 + 249 hypothetical protein - none -
fig|6666666.148659.peg.1156 CDS NC_002950.2 1278073 1277570 -1 - 504 FIG00936042: hypothetical protein - none -
fig|6666666.148659.peg.1157 CDS NC_002950.2 1279266 1278262 -3 - 1005 ATP-dependent DNA helicase - none -
fig|6666666.148659.peg.1158 CDS NC_002950.2 1279448 1279263 -2 - 186 ATP-dependent DNA helicase - none -
fig|6666666.148659.peg.1159 CDS NC_002950.2 1283059 1279682 -1 - 3378 hypothetical protein - none -
fig|6666666.148659.peg.1160 CDS NC_002950.2 1283548 1283327 -1 - 222 transcriptional regulator, putative - none -
fig|6666666.148659.peg.1161 CDS NC_002950.2 1283645 1283818 2 + 174 hypothetical protein - none -
fig|6666666.148659.peg.1162 CDS NC_002950.2 1284165 1284563 3 + 399 DNA-binding protein, histone-like family - none -
fig|6666666.148659.peg.1163 CDS NC_002950.2 1284771 1284649 -3 - 123 hypothetical protein - none -
fig|6666666.148659.peg.1164 CDS NC_002950.2 1287005 1285083 -2 - 1923 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.148659.peg.1165 CDS NC_002950.2 1287588 1289135 3 + 1548 Ribosylnicotinamide kinase (EC 2.7.1.22) homolog / Unknown conserved in Flavobacteria - none -
fig|6666666.148659.peg.1166 CDS NC_002950.2 1289229 1290971 3 + 1743 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.148659.peg.1167 CDS NC_002950.2 1291073 1291519 2 + 447 carbonic anhydrase, family 3 - none -
fig|6666666.148659.peg.1168 CDS NC_002950.2 1291532 1292545 2 + 1014 TPR domain protein - none -
fig|6666666.148659.peg.1169 CDS NC_002950.2 1292591 1293223 2 + 633 Ribonuclease HI-related protein 3 Ribonuclease H
fig|6666666.148659.peg.1170 CDS NC_002950.2 1293322 1294410 1 + 1089 FIG00935887: hypothetical protein - none -
fig|6666666.148659.peg.1171 CDS NC_002950.2 1294761 1295573 3 + 813 lipoprotein protein, putative - none -
fig|6666666.148659.peg.1172 CDS NC_002950.2 1295570 1295725 2 + 156 hypothetical protein - none -
fig|6666666.148659.peg.1173 CDS NC_002950.2 1295715 1296047 3 + 333 FIG00936941: hypothetical protein - none -
fig|6666666.148659.peg.1174 CDS NC_002950.2 1296077 1296535 2 + 459 FIG00897728: hypothetical protein - none -
fig|6666666.148659.peg.1175 CDS NC_002950.2 1296706 1296569 -1 - 138 hypothetical protein - none -
fig|6666666.148659.peg.1176 CDS NC_002950.2 1296811 1297122 1 + 312 hypothetical protein - none -
fig|6666666.148659.peg.1177 CDS NC_002950.2 1297126 1298259 1 + 1134 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.148659.peg.1178 CDS NC_002950.2 1298269 1298994 1 + 726 Oxidoreductase, short chain dehydrogenase/reductase family - none -
fig|6666666.148659.peg.1179 CDS NC_002950.2 1299314 1299165 -2 - 150 hypothetical protein - none -
fig|6666666.148659.peg.1180 CDS NC_002950.2 1299655 1299804 1 + 150 hypothetical protein - none -
fig|6666666.148659.peg.1181 CDS NC_002950.2 1299934 1301499 1 + 1566 transglycosylase - none -
fig|6666666.148659.peg.1182 CDS NC_002950.2 1301525 1303396 2 + 1872 COG0488: ATPase components of ABC transporters with duplicated ATPase domains - none -
fig|6666666.148659.peg.1183 CDS NC_002950.2 1303443 1304108 3 + 666 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.148659.peg.1184 CDS NC_002950.2 1304439 1304086 -3 - 354 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.1185 CDS NC_002950.2 1305174 1304464 -3 - 711 Mobile element protein - none -
fig|6666666.148659.peg.1186 CDS NC_002950.2 1305545 1305189 -2 - 357 Mobile element protein - none -
fig|6666666.148659.peg.1187 CDS NC_002950.2 1305774 1305649 -3 - 126 hypothetical protein - none -
fig|6666666.148659.peg.1188 CDS NC_002950.2 1308158 1306050 -2 - 2109 hypothetical protein - none -
fig|6666666.148659.peg.1189 CDS NC_002950.2 1309683 1308364 -3 - 1320 NAD-specific glutamate dehydrogenase (EC 1.4.1.2) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.148659.peg.1190 CDS NC_002950.2 1310252 1310380 2 + 129 hypothetical protein - none -
fig|6666666.148659.peg.1191 CDS NC_002950.2 1311346 1310390 -1 - 957 L-threonine 3-dehydrogenase (EC 1.1.1.103) Glycine Biosynthesis;
Threonine degradation
fig|6666666.148659.peg.1192 CDS NC_002950.2 1311336 1311494 3 + 159 hypothetical protein - none -
fig|6666666.148659.peg.1193 CDS NC_002950.2 1311716 1312372 2 + 657 FIG00936194: hypothetical protein - none -
fig|6666666.148659.peg.1194 CDS NC_002950.2 1312369 1312968 1 + 600 transcriptional regulator, LuxR family - none -
fig|6666666.148659.peg.1195 CDS NC_002950.2 1313669 1312986 -2 - 684 Similar to tRNA pseudouridine synthase C, group TruC1 RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.148659.peg.1196 CDS NC_002950.2 1314459 1313713 -3 - 747 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.148659.peg.1197 CDS NC_002950.2 1315178 1314543 -2 - 636 Transcriptional regulator, TetR family - none -
fig|6666666.148659.peg.1198 CDS NC_002950.2 1315753 1317540 1 + 1788 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.148659.peg.1199 CDS NC_002950.2 1317575 1319161 2 + 1587 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.148659.peg.1200 CDS NC_002950.2 1319674 1320759 1 + 1086 Mobile element protein - none -
fig|6666666.148659.peg.1201 CDS NC_002950.2 1320784 1321122 1 + 339 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.1202 CDS NC_002950.2 1321939 1324569 1 + 2631 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.148659.peg.1203 CDS NC_002950.2 1324584 1325645 3 + 1062 3-dehydroquinate synthase (EC 4.2.3.4) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.148659.peg.1204 CDS NC_002950.2 1326622 1325891 -1 - 732 probable DNA alkylation repair enzyme - none -
fig|6666666.148659.peg.1205 CDS NC_002950.2 1327158 1326637 -3 - 522 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) - none -
fig|6666666.148659.peg.1206 CDS NC_002950.2 1328113 1327274 -1 - 840 FIG00936236: hypothetical protein - none -
fig|6666666.148659.peg.1207 CDS NC_002950.2 1329674 1328439 -2 - 1236 FIG00935867: hypothetical protein - none -
fig|6666666.148659.peg.1208 CDS NC_002950.2 1331696 1329687 -2 - 2010 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.148659.peg.1209 CDS NC_002950.2 1332211 1331684 -1 - 528 acetyltransferase, GNAT family - none -
fig|6666666.148659.peg.1210 CDS NC_002950.2 1332841 1332218 -1 - 624 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.148659.peg.1211 CDS NC_002950.2 1334352 1332838 -3 - 1515 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.148659.peg.1212 CDS NC_002950.2 1334531 1334677 2 + 147 hypothetical protein - none -
fig|6666666.148659.peg.1213 CDS NC_002950.2 1334868 1334674 -3 - 195 Integration host factor alpha/beta DNA structural proteins, bacterial
fig|6666666.148659.peg.1214 CDS NC_002950.2 1335390 1335064 -3 - 327 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.148659.peg.1215 CDS NC_002950.2 1337984 1335588 -2 - 2397 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.148659.peg.1216 CDS NC_002950.2 1338511 1339668 1 + 1158 Mobile element protein - none -
fig|6666666.148659.peg.1217 CDS NC_002950.2 1340724 1339822 -3 - 903 Mobile element protein - none -
fig|6666666.148659.peg.1218 CDS NC_002950.2 1345031 1344888 -2 - 144 hypothetical protein - none -
fig|6666666.148659.peg.1219 CDS NC_002950.2 1345242 1345114 -3 - 129 hypothetical protein - none -
fig|6666666.148659.peg.1220 CDS NC_002950.2 1346915 1347028 2 + 114 hypothetical protein - none -
fig|6666666.148659.peg.1221 CDS NC_002950.2 1347143 1347526 2 + 384 hypothetical protein - none -
fig|6666666.148659.peg.1222 CDS NC_002950.2 1349291 1347660 -2 - 1632 Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88) Arginine and Ornithine Degradation;
Proline, 4-hydroxyproline uptake and utilization
fig|6666666.148659.peg.1223 CDS NC_002950.2 1350297 1349368 -3 - 930 FIG00936429: hypothetical protein - none -
fig|6666666.148659.peg.1224 CDS NC_002950.2 1351533 1350304 -3 - 1230 Ornithine aminotransferase (EC 2.6.1.13) Arginine and Ornithine Degradation;
Dimethylarginine metabolism
fig|6666666.148659.peg.1225 CDS NC_002950.2 1351927 1351772 -1 - 156 FIG00936161: hypothetical protein - none -
fig|6666666.148659.peg.1226 CDS NC_002950.2 1351983 1352549 3 + 567 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.148659.peg.1227 CDS NC_002950.2 1353085 1353591 1 + 507 DNA-binding protein, histone-like family - none -
fig|6666666.148659.peg.1228 CDS NC_002950.2 1353852 1355159 3 + 1308 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.148659.peg.1229 CDS NC_002950.2 1355492 1356574 2 + 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.148659.peg.1230 CDS NC_002950.2 1356675 1357595 3 + 921 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.148659.peg.1231 CDS NC_002950.2 1357614 1358861 3 + 1248 FIG008208: hypothetical protein - none -
fig|6666666.148659.peg.1232 CDS NC_002950.2 1359027 1360151 3 + 1125 FIG00936554: hypothetical protein - none -
fig|6666666.148659.peg.1233 CDS NC_002950.2 1360175 1360630 2 + 456 FIG00936338: hypothetical protein - none -
fig|6666666.148659.peg.1234 CDS NC_002950.2 1360693 1362855 1 + 2163 FIG00936660: hypothetical protein - none -
fig|6666666.148659.peg.1235 CDS NC_002950.2 1363035 1362892 -3 - 144 hypothetical protein - none -
fig|6666666.148659.peg.1236 CDS NC_002950.2 1363013 1365001 2 + 1989 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) - none -
fig|6666666.148659.peg.1237 CDS NC_002950.2 1365591 1365109 -3 - 483 Ferritin-like protein 2 Iron-sulfur cluster assembly
fig|6666666.148659.peg.1238 CDS NC_002950.2 1366091 1367188 2 + 1098 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) - none -
fig|6666666.148659.peg.1239 CDS NC_002950.2 1367181 1368254 3 + 1074 GDP-L-fucose synthetase (EC 1.1.1.271) - none -
fig|6666666.148659.peg.1240 CDS NC_002950.2 1368393 1369412 3 + 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.148659.peg.1241 CDS NC_002950.2 1371262 1369541 -1 - 1722 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes - none -
fig|6666666.148659.peg.1242 CDS NC_002950.2 1371327 1371482 3 + 156 hypothetical protein - none -
fig|6666666.148659.peg.1243 CDS NC_002950.2 1372274 1374721 2 + 2448 Ferrous iron transport protein B - none -
fig|6666666.148659.peg.1244 CDS NC_002950.2 1374741 1374926 3 + 186 hypothetical protein - none -
fig|6666666.148659.peg.1245 CDS NC_002950.2 1374934 1375389 1 + 456 FIG00936104: hypothetical protein - none -
fig|6666666.148659.peg.1246 CDS NC_002950.2 1375971 1377770 3 + 1800 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.148659.peg.1247 CDS NC_002950.2 1377977 1378123 2 + 147 hypothetical protein - none -
fig|6666666.148659.peg.1248 CDS NC_002950.2 1378423 1378274 -1 - 150 hypothetical protein - none -
fig|6666666.148659.peg.1249 CDS NC_002950.2 1379159 1378620 -2 - 540 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) ## SSU rRNA m(2)G966 CBSS-226186.1.peg.3978;
CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.148659.peg.1250 CDS NC_002950.2 1380011 1379196 -2 - 816 FIG032012: hypothetical protein CBSS-226186.1.peg.3978
fig|6666666.148659.peg.1251 CDS NC_002950.2 1380661 1380029 -1 - 633 FIG036016: hypothetical protein CBSS-226186.1.peg.3978
fig|6666666.148659.peg.1252 CDS NC_002950.2 1380792 1382207 3 + 1416 RecD-like DNA helicase Atu2026 - none -
fig|6666666.148659.peg.1253 CDS NC_002950.2 1383555 1382224 -3 - 1332 FIG00935697: hypothetical protein - none -
fig|6666666.148659.peg.1254 CDS NC_002950.2 1386628 1383761 -1 - 2868 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.148659.peg.1255 CDS NC_002950.2 1387256 1386633 -2 - 624 Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis Glutathione: Non-redox reactions
fig|6666666.148659.peg.1256 CDS NC_002950.2 1387939 1387274 -1 - 666 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.148659.peg.1257 CDS NC_002950.2 1388788 1387973 -1 - 816 FIG00936355: hypothetical protein - none -
fig|6666666.148659.peg.1258 CDS NC_002950.2 1389215 1389886 2 + 672 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148659.peg.1259 CDS NC_002950.2 1389921 1390415 3 + 495 FIG00936260: hypothetical protein - none -
fig|6666666.148659.peg.1260 CDS NC_002950.2 1390426 1391613 1 + 1188 capA protein, putative - none -
fig|6666666.148659.peg.1261 CDS NC_002950.2 1392452 1394080 2 + 1629 Probable dipeptidase (EC 3.4.-.-) - none -
fig|6666666.148659.peg.1262 CDS NC_002950.2 1395558 1394452 -3 - 1107 Chorismate synthase (EC 4.2.3.5) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.148659.peg.1263 CDS NC_002950.2 1396256 1395708 -2 - 549 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.148659.peg.1264 CDS NC_002950.2 1396669 1396331 -1 - 339 hypothetical protein - none -
fig|6666666.148659.peg.1265 CDS NC_002950.2 1397244 1396834 -3 - 411 FIG00935919: hypothetical protein - none -
fig|6666666.148659.peg.1266 CDS NC_002950.2 1397858 1397292 -2 - 567 RNA polymerase ECF-type sigma factor - none -
fig|6666666.148659.peg.1267 CDS NC_002950.2 1398892 1399527 1 + 636 Mobile element protein - none -
fig|6666666.148659.peg.1268 CDS NC_002950.2 1401413 1399746 -2 - 1668 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.148659.peg.1269 CDS NC_002950.2 1401570 1402904 3 + 1335 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.148659.peg.1270 CDS NC_002950.2 1403497 1402952 -1 - 546 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.148659.peg.1271 CDS NC_002950.2 1403902 1403594 -1 - 309 FIG00935611: hypothetical protein - none -
fig|6666666.148659.peg.1272 CDS NC_002950.2 1404098 1405231 2 + 1134 hemagglutinin, putative - none -
fig|6666666.148659.peg.1273 CDS NC_002950.2 1406670 1405360 -3 - 1311 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.148659.peg.1274 CDS NC_002950.2 1408770 1406713 -3 - 2058 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.148659.peg.1275 CDS NC_002950.2 1409806 1410225 1 + 420 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.148659.peg.1276 CDS NC_002950.2 1410446 1410318 -2 - 129 hypothetical protein - none -
fig|6666666.148659.peg.1277 CDS NC_002950.2 1410604 1411761 1 + 1158 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.148659.peg.1278 CDS NC_002950.2 1411871 1412185 2 + 315 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.148659.peg.1279 CDS NC_002950.2 1412182 1414170 1 + 1989 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.148659.peg.1280 CDS NC_002950.2 1415515 1414316 -1 - 1200 FIG00935909: hypothetical protein - none -
fig|6666666.148659.peg.1281 CDS NC_002950.2 1416492 1415512 -3 - 981 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.148659.peg.1282 CDS NC_002950.2 1416984 1416520 -3 - 465 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.148659.peg.1283 CDS NC_002950.2 1417484 1417359 -2 - 126 hypothetical protein - none -
fig|6666666.148659.peg.1284 CDS NC_002950.2 1417467 1417640 3 + 174 FIG00936059: hypothetical protein - none -
fig|6666666.148659.peg.1285 CDS NC_002950.2 1418001 1417843 -3 - 159 hypothetical protein - none -
fig|6666666.148659.peg.1286 CDS NC_002950.2 1418133 1418378 3 + 246 Error-prone repair protein UmuD - none -
fig|6666666.148659.peg.1287 CDS NC_002950.2 1418386 1419684 1 + 1299 Error-prone, lesion bypass DNA polymerase V (UmuC) - none -
fig|6666666.148659.peg.1288 CDS NC_002950.2 1421938 1420388 -1 - 1551 L-lactate permease Lactate utilization
fig|6666666.148659.peg.1289 CDS NC_002950.2 1422255 1422725 3 + 471 FIG00935832: hypothetical protein - none -
fig|6666666.148659.peg.1290 CDS NC_002950.2 1422725 1423741 2 + 1017 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.148659.peg.1291 CDS NC_002950.2 1423768 1425246 1 + 1479 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.148659.peg.1292 CDS NC_002950.2 1425536 1425399 -2 - 138 Conjugative transposon protein TraP @ DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.148659.peg.1293 CDS NC_002950.2 1425730 1426851 1 + 1122 glycosyl transferase, group 1 family protein - none -
fig|6666666.148659.peg.1294 CDS NC_002950.2 1426848 1428119 3 + 1272 Glycosyl transferase, group 1 family protein - none -
fig|6666666.148659.peg.1295 CDS NC_002950.2 1428256 1428720 1 + 465 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.148659.peg.1296 CDS NC_002950.2 1428748 1429629 1 + 882 Transcription regulator [contains diacylglycerol kinase catalytic domain] - none -
fig|6666666.148659.peg.1297 CDS NC_002950.2 1429856 1429722 -2 - 135 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.1298 CDS NC_002950.2 1430591 1429881 -2 - 711 Mobile element protein - none -
fig|6666666.148659.peg.1299 CDS NC_002950.2 1430956 1430606 -1 - 351 Mobile element protein - none -
fig|6666666.148659.peg.1300 CDS NC_002950.2 1431006 1432136 3 + 1131 Mobile element protein - none -
fig|6666666.148659.peg.1301 CDS NC_002950.2 1432792 1432328 -1 - 465 FIG00935776: hypothetical protein - none -
fig|6666666.148659.peg.1302 CDS NC_002950.2 1433240 1432827 -2 - 414 hypothetical protein - none -
fig|6666666.148659.peg.1303 CDS NC_002950.2 1433923 1433291 -1 - 633 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.148659.peg.1304 CDS NC_002950.2 1434855 1434034 -3 - 822 FIG003879: Predicted amidohydrolase CBSS-354.1.peg.2917
fig|6666666.148659.peg.1305 CDS NC_002950.2 1435367 1434852 -2 - 516 Acyltransferase family protein - none -
fig|6666666.148659.peg.1306 CDS NC_002950.2 1435318 1435446 1 + 129 hypothetical protein - none -
fig|6666666.148659.peg.1307 CDS NC_002950.2 1435852 1435451 -1 - 402 FIG00935521: hypothetical protein - none -
fig|6666666.148659.peg.1308 CDS NC_002950.2 1436065 1436184 1 + 120 hypothetical protein - none -
fig|6666666.148659.peg.1309 CDS NC_002950.2 1436548 1436417 -1 - 132 hypothetical protein - none -
fig|6666666.148659.peg.1310 CDS NC_002950.2 1437396 1436743 -3 - 654 Ribosomal-protein-S5p-alanine acetyltransferase Ribosomal protein S5p acylation;
Ribosome biogenesis bacterial
fig|6666666.148659.peg.1311 CDS NC_002950.2 1438642 1437734 -1 - 909 FIG00936584: hypothetical protein - none -
fig|6666666.148659.peg.1312 CDS NC_002950.2 1440003 1438708 -3 - 1296 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.148659.peg.1313 CDS NC_002950.2 1442198 1440000 -2 - 2199 Dipeptidyl peptidase IV - none -
fig|6666666.148659.peg.1314 CDS NC_002950.2 1443660 1442230 -3 - 1431 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.148659.peg.1315 CDS NC_002950.2 1443950 1444219 2 + 270 Mobile element protein - none -
fig|6666666.148659.peg.1316 CDS NC_002950.2 1445635 1444478 -1 - 1158 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.148659.peg.1317 CDS NC_002950.2 1446159 1445632 -3 - 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.148659.peg.1318 CDS NC_002950.2 1447470 1446166 -3 - 1305 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.148659.peg.1319 CDS NC_002950.2 1448103 1447501 -3 - 603 FIG00936255: hypothetical protein - none -
fig|6666666.148659.peg.1320 CDS NC_002950.2 1449460 1448123 -1 - 1338 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.148659.peg.1321 CDS NC_002950.2 1450497 1449493 -3 - 1005 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) - none -
fig|6666666.148659.peg.1322 CDS NC_002950.2 1452319 1450583 -1 - 1737 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.148659.peg.1323 CDS NC_002950.2 1453320 1452442 -3 - 879 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.148659.peg.1324 CDS NC_002950.2 1454809 1453391 -1 - 1419 FIG00935908: hypothetical protein - none -
fig|6666666.148659.peg.1325 CDS NC_002950.2 1454796 1454936 3 + 141 hypothetical protein - none -
fig|6666666.148659.peg.1326 CDS NC_002950.2 1455069 1454947 -3 - 123 hypothetical protein - none -
fig|6666666.148659.peg.1327 CDS NC_002950.2 1456630 1455344 -1 - 1287 surface antigen, putative - none -
fig|6666666.148659.peg.1328 CDS NC_002950.2 1457174 1457037 -2 - 138 hypothetical protein - none -
fig|6666666.148659.peg.1329 CDS NC_002950.2 1457764 1457645 -1 - 120 hypothetical protein - none -
fig|6666666.148659.peg.1330 CDS NC_002950.2 1458950 1457805 -2 - 1146 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.148659.peg.1331 CDS NC_002950.2 1459077 1460015 3 + 939 thiamine biosynthesis protein, putative - none -
fig|6666666.148659.peg.1332 CDS NC_002950.2 1460067 1460765 3 + 699 Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB Alkanesulfonates Utilization
fig|6666666.148659.peg.1333 CDS NC_002950.2 1460762 1461511 2 + 750 ABC transporter, permease protein - none -
fig|6666666.148659.peg.1334 CDS NC_002950.2 1461561 1462610 3 + 1050 FIG00935497: hypothetical protein - none -
fig|6666666.148659.peg.1335 CDS NC_002950.2 1462794 1463447 3 + 654 amino acid exporter, putative - none -
fig|6666666.148659.peg.1336 CDS NC_002950.2 1463878 1464234 1 + 357 Mobile element protein - none -
fig|6666666.148659.peg.1337 CDS NC_002950.2 1464249 1464959 3 + 711 Mobile element protein - none -
fig|6666666.148659.peg.1338 CDS NC_002950.2 1464984 1465127 3 + 144 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.1339 CDS NC_002950.2 1466425 1465223 -1 - 1203 FIG00935679: hypothetical protein - none -
fig|6666666.148659.peg.1340 CDS NC_002950.2 1469038 1466459 -1 - 2580 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.148659.peg.1341 CDS NC_002950.2 1470148 1469222 -1 - 927 Chromosome segregation ATPases - none -
fig|6666666.148659.peg.1342 CDS NC_002950.2 1470895 1470185 -1 - 711 FIG00936004: hypothetical protein - none -
fig|6666666.148659.peg.1343 CDS NC_002950.2 1471418 1470960 -2 - 459 DNA-binding protein, histone-like family - none -
fig|6666666.148659.peg.1344 CDS NC_002950.2 1471531 1471415 -1 - 117 hypothetical protein - none -
fig|6666666.148659.peg.1345 CDS NC_002950.2 1471810 1473021 1 + 1212 FIG00936610: hypothetical protein - none -
fig|6666666.148659.peg.1346 CDS NC_002950.2 1474506 1473049 -3 - 1458 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Bacterial cell division cluster;
Peptidoglycan Biosynthesis
fig|6666666.148659.peg.1347 CDS NC_002950.2 1476361 1474496 -1 - 1866 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
Bacterial cell division cluster;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.148659.peg.1348 CDS NC_002950.2 1476872 1476354 -2 - 519 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.148659.peg.1349 CDS NC_002950.2 1477759 1476872 -1 - 888 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.148659.peg.1350 CDS NC_002950.2 1478816 1477797 -2 - 1020 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster
fig|6666666.148659.peg.1351 CDS NC_002950.2 1480436 1478919 -2 - 1518 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.148659.peg.1352 CDS NC_002950.2 1480834 1481007 1 + 174 Mobile element protein - none -
fig|6666666.148659.peg.1353 CDS NC_002950.2 1481600 1481256 -2 - 345 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.1354 CDS NC_002950.2 1482335 1481625 -2 - 711 Mobile element protein - none -
fig|6666666.148659.peg.1355 CDS NC_002950.2 1482706 1482350 -1 - 357 Mobile element protein - none -
fig|6666666.148659.peg.1356 CDS NC_002950.2 1483054 1483233 1 + 180 Mobile element protein - none -
fig|6666666.148659.peg.1357 CDS NC_002950.2 1484832 1483489 -3 - 1344 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.148659.peg.1358 CDS NC_002950.2 1486266 1485121 -3 - 1146 AP endonuclease domain protein - none -
fig|6666666.148659.peg.1359 CDS NC_002950.2 1487177 1486263 -2 - 915 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.148659.peg.1360 CDS NC_002950.2 1487877 1487161 -3 - 717 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.148659.peg.1361 CDS NC_002950.2 1490525 1487904 -2 - 2622 Organic solvent tolerance protein precursor ECSIG4-SIG7
fig|6666666.148659.peg.1362 CDS NC_002950.2 1490913 1490776 -3 - 138 Mobile element protein - none -
fig|6666666.148659.peg.1363 CDS NC_002950.2 1491717 1491202 -3 - 516 nitroimidazole resistance protein, putative - none -
fig|6666666.148659.peg.1364 CDS NC_002950.2 1492001 1492966 2 + 966 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.148659.peg.1365 CDS NC_002950.2 1493481 1492963 -3 - 519 FIG00935651: hypothetical protein - none -
fig|6666666.148659.peg.1366 CDS NC_002950.2 1495256 1493571 -2 - 1686 Predicted cobalt transporter in Bacteroides_Porphyromonas Coenzyme B12 biosynthesis
fig|6666666.148659.peg.1367 CDS NC_002950.2 1497161 1499764 2 + 2604 Thiamin-regulated outer membrane receptor Omr1 Thiamin biosynthesis
fig|6666666.148659.peg.1368 CDS NC_002950.2 1500197 1501138 2 + 942 Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.148659.peg.1369 CDS NC_002950.2 1501184 1501324 2 + 141 hypothetical protein - none -
fig|6666666.148659.peg.1370 CDS NC_002950.2 1501474 1503081 1 + 1608 Fumarate hydratase class I (EC 4.2.1.2) TCA Cycle
fig|6666666.148659.peg.1371 CDS NC_002950.2 1503120 1505012 3 + 1893 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.148659.peg.1372 CDS NC_002950.2 1505335 1505532 1 + 198 ISPg5, transposase Orf1 - none -
fig|6666666.148659.peg.1373 CDS NC_002950.2 1505736 1506524 3 + 789 Mobile element protein - none -
fig|6666666.148659.peg.1374 CDS NC_002950.2 1509002 1507470 -2 - 1533 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.148659.peg.1375 CDS NC_002950.2 1510897 1509227 -1 - 1671 Peptidylarginine deiminase precursor (EC 3.5.3.-) - none -
fig|6666666.148659.peg.1376 CDS NC_002950.2 1511400 1511242 -3 - 159 hypothetical protein - none -
fig|6666666.148659.peg.1377 CDS NC_002950.2 1514486 1511955 -2 - 2532 FIG00935743: hypothetical protein - none -
fig|6666666.148659.peg.1378 CDS NC_002950.2 1515112 1514627 -1 - 486 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.148659.peg.1379 CDS NC_002950.2 1515890 1515204 -2 - 687 FIG00936184: hypothetical protein - none -
fig|6666666.148659.peg.1380 CDS NC_002950.2 1516759 1516076 -1 - 684 DNA-binding response regulator, LuxR family - none -
fig|6666666.148659.peg.1381 CDS NC_002950.2 1518581 1516824 -2 - 1758 sensor histidine kinase - none -
fig|6666666.148659.peg.1382 CDS NC_002950.2 1518971 1519186 2 + 216 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.148659.peg.1383 CDS NC_002950.2 1519162 1519830 1 + 669 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.148659.peg.1384 CDS NC_002950.2 1520443 1521669 1 + 1227 transposase - none -
fig|6666666.148659.peg.1385 CDS NC_002950.2 1521739 1523814 1 + 2076 ATPase, putative - none -
fig|6666666.148659.peg.1386 CDS NC_002950.2 1524129 1524296 3 + 168 FIG00936644: hypothetical protein - none -
fig|6666666.148659.peg.1387 CDS NC_002950.2 1524312 1524518 3 + 207 FIG00935811: hypothetical protein - none -
fig|6666666.148659.peg.1388 CDS NC_002950.2 1526750 1524675 -2 - 2076 hypothetical protein - none -
fig|6666666.148659.peg.1389 CDS NC_002950.2 1526889 1526740 -3 - 150 hypothetical protein - none -
fig|6666666.148659.peg.1390 CDS NC_002950.2 1527615 1527448 -3 - 168 lysozyme-related protein - none -
fig|6666666.148659.peg.1391 CDS NC_002950.2 1528120 1527692 -1 - 429 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1392 CDS NC_002950.2 1528943 1529302 2 + 360 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1393 CDS NC_002950.2 1529706 1529386 -3 - 321 tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.148659.peg.1394 CDS NC_002950.2 1531356 1529998 -3 - 1359 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.148659.peg.1395 CDS NC_002950.2 1532301 1531453 -3 - 849 transcriptional regulator, AraC family - none -
fig|6666666.148659.peg.1396 CDS NC_002950.2 1532424 1533509 3 + 1086 Mobile element protein - none -
fig|6666666.148659.peg.1397 CDS NC_002950.2 1533534 1533665 3 + 132 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.1398 CDS NC_002950.2 1534704 1534390 -3 - 315 Transcriptional regulator, HxlR family - none -
fig|6666666.148659.peg.1399 CDS NC_002950.2 1534837 1535244 1 + 408 hypothetical protein - none -
fig|6666666.148659.peg.1400 CDS NC_002950.2 1535666 1535370 -2 - 297 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148659.peg.1401 CDS NC_002950.2 1536941 1535739 -2 - 1203 Mobile element protein - none -
fig|6666666.148659.peg.1402 CDS NC_002950.2 1538196 1536967 -3 - 1230 Mobile element protein - none -
fig|6666666.148659.peg.1403 CDS NC_002950.2 1538512 1538688 1 + 177 Transposase - none -
fig|6666666.148659.peg.1404 CDS NC_002950.2 1538724 1539257 3 + 534 FIG00936134: hypothetical protein - none -
fig|6666666.148659.peg.1405 CDS NC_002950.2 1539284 1539742 2 + 459 FIG00935622: hypothetical protein - none -
fig|6666666.148659.peg.1406 CDS NC_002950.2 1539850 1539722 -1 - 129 hypothetical protein - none -
fig|6666666.148659.peg.1407 CDS NC_002950.2 1540127 1540459 2 + 333 FIG00935850: hypothetical protein - none -
fig|6666666.148659.peg.1408 CDS NC_002950.2 1540466 1540987 2 + 522 FIG00936328: hypothetical protein - none -
fig|6666666.148659.peg.1409 CDS NC_002950.2 1541000 1541227 2 + 228 hypothetical protein - none -
fig|6666666.148659.peg.1410 CDS NC_002950.2 1541250 1541531 3 + 282 FIG00935685: hypothetical protein - none -
fig|6666666.148659.peg.1411 CDS NC_002950.2 1541544 1541723 3 + 180 hypothetical protein - none -
fig|6666666.148659.peg.1412 CDS NC_002950.2 1542122 1542766 2 + 645 hypothetical protein - none -
fig|6666666.148659.peg.1413 CDS NC_002950.2 1542763 1543335 1 + 573 FIG00939884: hypothetical protein - none -
fig|6666666.148659.peg.1414 CDS NC_002950.2 1543350 1543961 3 + 612 methlytransferase, UbiE/COQ5 family - none -
fig|6666666.148659.peg.1415 CDS NC_002950.2 1548088 1545080 -1 - 3009 Adenine-specific methyltransferase activity Eco57IA (EC 2.1.1.72) - none -
fig|6666666.148659.peg.1416 CDS NC_002950.2 1548291 1548491 3 + 201 hypothetical protein - none -
fig|6666666.148659.peg.1417 CDS NC_002950.2 1548671 1549138 2 + 468 Membrane-flanked domain - none -
fig|6666666.148659.peg.1418 CDS NC_002950.2 1549173 1549820 3 + 648 FIG00936531: hypothetical protein - none -
fig|6666666.148659.peg.1419 CDS NC_002950.2 1550315 1549851 -2 - 465 Conjugative transposon protein TraQ Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1420 CDS NC_002950.2 1550900 1550328 -2 - 573 Conjugative transposon protein TraO Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1421 CDS NC_002950.2 1551925 1550900 -1 - 1026 Conjugative transposon protein TraN Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1422 CDS NC_002950.2 1553309 1551948 -2 - 1362 Conjugative transposon protein TraM Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1423 CDS NC_002950.2 1553586 1553299 -3 - 288 FIG00935654: hypothetical protein - none -
fig|6666666.148659.peg.1424 CDS NC_002950.2 1554206 1553583 -2 - 624 Conjugative transposon protein TraK Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1425 CDS NC_002950.2 1555324 1554218 -1 - 1107 Conjugative transposon protein TraJ Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1426 CDS NC_002950.2 1555985 1555356 -2 - 630 Conjugative transposon protein TraI Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1427 CDS NC_002950.2 1558537 1556012 -1 - 2526 Conjugative transposon protein TraG Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1428 CDS NC_002950.2 1558749 1558534 -3 - 216 Conjugative transposon protein TraF Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1429 CDS NC_002950.2 1559157 1558873 -3 - 285 Conjugative transposon protein TraE Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1430 CDS NC_002950.2 1560069 1559365 -3 - 705 hypothetical protein - none -
fig|6666666.148659.peg.1431 CDS NC_002950.2 1560460 1560074 -1 - 387 Conjugative transposon protein TraB Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1432 CDS NC_002950.2 1561256 1560447 -2 - 810 Conjugative transposon protein TraA Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1433 CDS NC_002950.2 1561611 1561859 3 + 249 hypothetical protein - none -
fig|6666666.148659.peg.1434 CDS NC_002950.2 1561887 1562288 3 + 402 hypothetical protein clusted with conjugative transposons, BF0131 Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1435 CDS NC_002950.2 1562303 1563553 2 + 1251 Putative conjugative transposon mobilization protein BF0132 Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1436 CDS NC_002950.2 1563555 1565564 3 + 2010 Putative mobilization protein BF0133 Conjugative transposon, Bacteroidales
fig|6666666.148659.peg.1437 CDS NC_002950.2 1565881 1566093 1 + 213 hypothetical protein - none -
fig|6666666.148659.peg.1438 CDS NC_002950.2 1566220 1566906 1 + 687 FIG00936643: hypothetical protein - none -
fig|6666666.148659.peg.1439 CDS NC_002950.2 1566923 1569598 2 + 2676 putative TonB-dependent receptor - none -
fig|6666666.148659.peg.1440 CDS NC_002950.2 1569885 1571294 3 + 1410 FIG00936597: hypothetical protein - none -
fig|6666666.148659.peg.1441 CDS NC_002950.2 1571383 1573476 1 + 2094 DNA topoisomerase III, Bacteroidales-type (EC 5.99.1.2) DNA topoisomerases, Type I, ATP-independent
fig|6666666.148659.peg.1442 CDS NC_002950.2 1574225 1574695 2 + 471 DNA-binding protein, histone-like family - none -
fig|6666666.148659.peg.1443 CDS NC_002950.2 1574796 1575710 3 + 915 hypothetical protein - none -
fig|6666666.148659.peg.1444 CDS NC_002950.2 1576219 1576097 -1 - 123 hypothetical protein - none -
fig|6666666.148659.peg.1445 CDS NC_002950.2 1576239 1578530 3 + 2292 putative DNA methylase - none -
fig|6666666.148659.peg.1446 CDS NC_002950.2 1578760 1578590 -1 - 171 Transcriptional regulator, TetR family - none -
fig|6666666.148659.peg.1447 CDS NC_002950.2 1580365 1581315 1 + 951 LytB-related protein - none -
fig|6666666.148659.peg.1448 CDS NC_002950.2 1581333 1582319 3 + 987 NAD-dependent epimerase/dehydratase - none -
fig|6666666.148659.peg.1449 CDS NC_002950.2 1582368 1583261 3 + 894 COG1180: Radical SAM, Pyruvate-formate lyase-activating enzyme like - none -
fig|6666666.148659.peg.1450 CDS NC_002950.2 1583760 1586189 3 + 2430 hypothetical protein - none -
fig|6666666.148659.peg.1451 CDS NC_002950.2 1586200 1586748 1 + 549 hypothetical protein - none -
fig|6666666.148659.peg.1452 CDS NC_002950.2 1586831 1587499 2 + 669 hypothetical protein - none -
fig|6666666.148659.peg.1453 CDS NC_002950.2 1587749 1587910 2 + 162 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein - none -
fig|6666666.148659.peg.1454 CDS NC_002950.2 1588520 1587903 -2 - 618 ATP-dependent DNA helicase - none -
fig|6666666.148659.peg.1455 CDS NC_002950.2 1588609 1589925 1 + 1317 Phosphoglycerate mutase family Phosphoglycerate mutase protein family
fig|6666666.148659.peg.1456 CDS NC_002950.2 1589940 1590929 3 + 990 hypothetical protein - none -
fig|6666666.148659.peg.1457 CDS NC_002950.2 1590917 1591930 2 + 1014 hypothetical protein - none -
fig|6666666.148659.peg.1458 CDS NC_002950.2 1591881 1593257 3 + 1377 hypothetical protein - none -
fig|6666666.148659.peg.1459 CDS NC_002950.2 1593481 1593332 -1 - 150 hypothetical protein - none -
fig|6666666.148659.peg.1460 CDS NC_002950.2 1593579 1593436 -3 - 144 hypothetical protein - none -
fig|6666666.148659.peg.1461 CDS NC_002950.2 1594249 1594025 -1 - 225 transposase - none -
fig|6666666.148659.peg.1462 CDS NC_002950.2 1595556 1594936 -3 - 621 Mobile element protein - none -
fig|6666666.148659.peg.1463 CDS NC_002950.2 1595845 1597485 1 + 1641 hypothetical protein - none -
fig|6666666.148659.peg.1464 CDS NC_002950.2 1598020 1597859 -1 - 162 hypothetical protein - none -
fig|6666666.148659.peg.1465 CDS NC_002950.2 1599193 1598144 -1 - 1050 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.148659.peg.1466 CDS NC_002950.2 1600260 1599190 -3 - 1071 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.148659.peg.1467 CDS NC_002950.2 1601078 1600260 -2 - 819 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.148659.peg.1468 CDS NC_002950.2 1602839 1601103 -2 - 1737 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.148659.peg.1469 CDS NC_002950.2 1603961 1602849 -2 - 1113 Isochorismate synthase (EC 5.4.4.2) @ Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.148659.peg.1470 CDS NC_002950.2 1605461 1604022 -2 - 1440 ATP-dependent DNA helicase - none -
fig|6666666.148659.peg.1471 CDS NC_002950.2 1605923 1607248 2 + 1326 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.148659.peg.1472 CDS NC_002950.2 1607375 1609513 2 + 2139 hypothetical protein - none -
fig|6666666.148659.peg.1473 CDS NC_002950.2 1609510 1610400 1 + 891 RelA/SpoT - none -
fig|6666666.148659.peg.1474 CDS NC_002950.2 1610842 1610964 1 + 123 transposase - none -
fig|6666666.148659.peg.1475 CDS NC_002950.2 1610993 1611310 2 + 318 transposase - none -
fig|6666666.148659.peg.1476 CDS NC_002950.2 1611803 1611612 -2 - 192 hypothetical protein - none -
fig|6666666.148659.peg.1477 CDS NC_002950.2 1613851 1611803 -1 - 2049 Toprim domain protein CBSS-315749.4.peg.3658
fig|6666666.148659.peg.1478 CDS NC_002950.2 1614237 1613848 -3 - 390 conserved domain protein - none -
fig|6666666.148659.peg.1479 CDS NC_002950.2 1614449 1614240 -2 - 210 transcriptional regulator, putative - none -
fig|6666666.148659.peg.1480 CDS NC_002950.2 1616560 1616435 -1 - 126 hypothetical protein - none -
fig|6666666.148659.peg.1481 CDS NC_002950.2 1616562 1617389 3 + 828 Cell division protein FtsX Bacterial Cell Division
fig|6666666.148659.peg.1482 CDS NC_002950.2 1617436 1617663 1 + 228 FIG00935882: hypothetical protein - none -
fig|6666666.148659.peg.1483 CDS NC_002950.2 1617771 1618613 3 + 843 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.148659.peg.1484 CDS NC_002950.2 1618623 1619399 3 + 777 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.148659.peg.1485 CDS NC_002950.2 1619417 1620469 2 + 1053 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.148659.peg.1486 CDS NC_002950.2 1620575 1620459 -2 - 117 hypothetical protein - none -
fig|6666666.148659.peg.1487 CDS NC_002950.2 1620472 1620915 1 + 444 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.148659.peg.1488 CDS NC_002950.2 1620919 1622172 1 + 1254 Collagenase precursor (EC 3.4.-.-) - none -
fig|6666666.148659.peg.1489 CDS NC_002950.2 1622228 1622647 2 + 420 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.148659.peg.1490 CDS NC_002950.2 1622732 1623502 2 + 771 UPF0246 protein YaaA - none -
fig|6666666.148659.peg.1491 CDS NC_002950.2 1623640 1624215 1 + 576 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.148659.peg.1492 CDS NC_002950.2 1624573 1624451 -1 - 123 hypothetical protein - none -
fig|6666666.148659.peg.1493 CDS NC_002950.2 1624591 1624755 1 + 165 hypothetical protein - none -
fig|6666666.148659.peg.1494 CDS NC_002950.2 1625134 1627503 1 + 2370 FIG00935712: hypothetical protein - none -
fig|6666666.148659.peg.1495 CDS NC_002950.2 1628037 1627897 -3 - 141 hypothetical protein - none -
fig|6666666.148659.peg.1496 CDS NC_002950.2 1628356 1629006 1 + 651 hmuY protein - none -
fig|6666666.148659.peg.1497 CDS NC_002950.2 1629021 1630961 3 + 1941 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.148659.peg.1498 CDS NC_002950.2 1630998 1635407 3 + 4410 CobN/magnesium chelatase family protein - none -
fig|6666666.148659.peg.1499 CDS NC_002950.2 1635404 1636081 2 + 678 FIG00935937: hypothetical protein - none -
fig|6666666.148659.peg.1500 CDS NC_002950.2 1636151 1636729 2 + 579 hypothetical transporter PduT for various metalloporphyrins - none -
fig|6666666.148659.peg.1501 CDS NC_002950.2 1636735 1637061 1 + 327 FIG00935708: hypothetical protein - none -
fig|6666666.148659.peg.1502 CDS NC_002950.2 1637773 1637639 -1 - 135 hypothetical protein - none -
fig|6666666.148659.peg.1503 CDS NC_002950.2 1639082 1637994 -2 - 1089 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.148659.peg.1504 CDS NC_002950.2 1640221 1639157 -1 - 1065 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.148659.peg.1505 CDS NC_002950.2 1641085 1640228 -1 - 858 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.148659.peg.1506 CDS NC_002950.2 1641672 1641082 -3 - 591 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.148659.peg.1507 CDS NC_002950.2 1642556 1641687 -2 - 870 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.148659.peg.1508 CDS NC_002950.2 1644626 1642671 -2 - 1956 FIG00935687: hypothetical protein - none -
fig|6666666.148659.peg.1509 CDS NC_002950.2 1645949 1644711 -2 - 1239 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] - none -
fig|6666666.148659.peg.1510 CDS NC_002950.2 1647689 1645974 -2 - 1716 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.148659.peg.1511 CDS NC_002950.2 1647863 1648003 2 + 141 Mobile element protein - none -
fig|6666666.148659.peg.1512 CDS NC_002950.2 1648675 1648544 -1 - 132 hypothetical protein - none -
fig|6666666.148659.peg.1513 CDS NC_002950.2 1648992 1648672 -3 - 321 rhodanese-like domain protein - none -
fig|6666666.148659.peg.1514 CDS NC_002950.2 1650443 1649028 -2 - 1416 Metallo-beta-lactamase family protein - none -
fig|6666666.148659.peg.1515 CDS NC_002950.2 1651342 1650536 -1 - 807 FIG00936034: hypothetical protein - none -
fig|6666666.148659.peg.1516 CDS NC_002950.2 1652258 1651407 -2 - 852 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.148659.peg.1517 CDS NC_002950.2 1652697 1652551 -3 - 147 hypothetical protein - none -
fig|6666666.148659.peg.1518 CDS NC_002950.2 1652809 1652934 1 + 126 hypothetical protein - none -
fig|6666666.148659.peg.1519 CDS NC_002950.2 1653120 1654712 3 + 1593 L-aspartate oxidase (EC 1.4.3.16) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.148659.peg.1520 CDS NC_002950.2 1654744 1655586 1 + 843 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.148659.peg.1521 CDS NC_002950.2 1655606 1656532 2 + 927 Quinolinate synthetase (EC 2.5.1.72) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.148659.peg.1522 CDS NC_002950.2 1656633 1657628 3 + 996 MoxR-like ATPase in aerotolerance operon Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148659.peg.1523 CDS NC_002950.2 1657750 1658511 1 + 762 hypothetical protein PA3071 Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148659.peg.1524 CDS NC_002950.2 1658508 1659464 3 + 957 FIG00936810: hypothetical protein - none -
fig|6666666.148659.peg.1525 CDS NC_002950.2 1659461 1660444 2 + 984 BatA (Bacteroides aerotolerance operon) Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148659.peg.1526 CDS NC_002950.2 1660455 1661474 3 + 1020 BatB Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148659.peg.1527 CDS NC_002950.2 1661471 1662214 2 + 744 BatC Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148659.peg.1528 CDS NC_002950.2 1662497 1664197 2 + 1701 BatD Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148659.peg.1529 CDS NC_002950.2 1664194 1665102 1 + 909 BatE Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.148659.peg.1530 CDS NC_002950.2 1665123 1665839 3 + 717 putative membrane-associated phospholipid phosphatase - none -
fig|6666666.148659.peg.1531 CDS NC_002950.2 1666622 1665855 -2 - 768 Diadenylate cyclase spyDAC; Bacterial checkpoint controller DisA with nucleotide-binding domain Bacterial checkpoint-control-related cluster;
Bacterial checkpoint-control-related cluster
fig|6666666.148659.peg.1532 CDS NC_002950.2 1667528 1666683 -2 - 846 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.148659.peg.1533 CDS NC_002950.2 1668057 1669154 3 + 1098 Prophage Lp2 protein 6 - none -
fig|6666666.148659.peg.1534 CDS NC_002950.2 1669511 1671595 2 + 2085 Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog CBSS-56780.10.peg.1536
fig|6666666.148659.peg.1535 CDS NC_002950.2 1673677 1672142 -1 - 1536 FIG00936522: hypothetical protein - none -
fig|6666666.148659.peg.1536 CDS NC_002950.2 1674340 1673684 -1 - 657 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.148659.peg.1537 CDS NC_002950.2 1674683 1678096 2 + 3414 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.148659.peg.1538 CDS NC_002950.2 1678166 1678546 2 + 381 DnaK suppressor protein, putative - none -
fig|6666666.148659.peg.1539 CDS NC_002950.2 1678550 1679230 2 + 681 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.148659.peg.1540 CDS NC_002950.2 1679227 1680015 1 + 789 FIG00935612: hypothetical protein - none -
fig|6666666.148659.peg.1541 CDS NC_002950.2 1681074 1680049 -3 - 1026 FIG00936504: hypothetical protein - none -
fig|6666666.148659.peg.1542 CDS NC_002950.2 1681882 1681109 -1 - 774 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.148659.peg.1543 CDS NC_002950.2 1682234 1681854 -2 - 381 FIG00936585: hypothetical protein - none -
fig|6666666.148659.peg.1544 CDS NC_002950.2 1682305 1682889 1 + 585 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.148659.peg.1545 CDS NC_002950.2 1682901 1685207 3 + 2307 FIG00935792: hypothetical protein - none -
fig|6666666.148659.peg.1546 CDS NC_002950.2 1685259 1686662 3 + 1404 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.148659.peg.1547 CDS NC_002950.2 1687715 1686993 -2 - 723 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family Potassium homeostasis
fig|6666666.148659.peg.1548 CDS NC_002950.2 1688678 1688529 -2 - 150 hypothetical protein - none -
fig|6666666.148659.peg.1549 CDS NC_002950.2 1689926 1688775 -2 - 1152 Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41); Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.148659.peg.1550 CDS NC_002950.2 1690365 1689931 -3 - 435 Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.148659.peg.1551 CDS NC_002950.2 1690639 1690403 -1 - 237 hypothetical protein - none -
fig|6666666.148659.peg.1552 CDS NC_002950.2 1691577 1690636 -3 - 942 Membrane protein associated with methylmalonyl-CoA decarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.148659.peg.1553 CDS NC_002950.2 1693155 1691602 -3 - 1554 Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module
fig|6666666.148659.peg.1554 CDS NC_002950.2 1693658 1693254 -2 - 405 Methylmalonyl-CoA epimerase (EC 5.1.99.1) Propionyl-CoA to Succinyl-CoA Module
fig|6666666.148659.peg.1555 CDS NC_002950.2 1694645 1693890 -2 - 756 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.148659.peg.1556 CDS NC_002950.2 1696617 1694674 -3 - 1944 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.148659.peg.1557 CDS NC_002950.2 1697256 1696648 -3 - 609 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.148659.peg.1558 CDS NC_002950.2 1697977 1698729 1 + 753 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148659.peg.1559 CDS NC_002950.2 1698720 1699475 3 + 756 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148659.peg.1560 CDS NC_002950.2 1700566 1699505 -1 - 1062 carboxyl-terminal protease-related protein - none -
fig|6666666.148659.peg.1561 CDS NC_002950.2 1701353 1700574 -2 - 780 FIG00936187: hypothetical protein - none -
fig|6666666.148659.peg.1562 CDS NC_002950.2 1704204 1701508 -3 - 2697 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.148659.peg.1563 CDS NC_002950.2 1705455 1704265 -3 - 1191 membrane bound regulatory protein, putative - none -
fig|6666666.148659.peg.1564 CDS NC_002950.2 1705815 1705615 -3 - 201 hypothetical protein - none -
fig|6666666.148659.peg.1565 CDS NC_002950.2 1705741 1706079 1 + 339 FIG00935788: hypothetical protein - none -
fig|6666666.148659.peg.1566 CDS NC_002950.2 1707363 1706278 -3 - 1086 Mobile element protein - none -
fig|6666666.148659.peg.1567 CDS NC_002950.2 1707513 1707385 -3 - 129 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.148659.peg.1568 CDS NC_002950.2 1707582 1708778 3 + 1197 Vitellogenin II precursor - none -
fig|6666666.148659.peg.1569 CDS NC_002950.2 1708882 1710546 1 + 1665 putative hemin receptor - none -
fig|6666666.148659.peg.1570 CDS NC_002950.2 1710993 1710838 -3 - 156 Mobile element protein - none -
fig|6666666.148659.peg.1571 CDS NC_002950.2 1711559 1711675 2 + 117 hypothetical protein - none -
fig|6666666.148659.peg.1572 CDS NC_002950.2 1711912 1712202 1 + 291 immunoreactive 23 kDa antigen PG66 - none -
fig|6666666.148659.peg.1573 CDS NC_002950.2 1712408 1713475 2 + 1068 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.148659.peg.1574 CDS NC_002950.2 1713525 1714679 3 + 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.148659.peg.1575 CDS NC_002950.2 1715238 1714813 -3 - 426 FIG00935531: hypothetical protein - none -
fig|6666666.148659.peg.1576 CDS NC_002950.2 1715924 1715304 -2 - 621 FIG00936164: hypothetical protein - none -
fig|6666666.148659.peg.1577 CDS NC_002950.2 1718550 1715965 -3 - 2586 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.148659.peg.1578 CDS NC_002950.2 1719869 1718754 -2 - 1116 Thiol:disulfide interchange protein - none -
fig|6666666.148659.peg.1579 CDS NC_002950.2 1720009 1719866 -1 - 144 hypothetical protein - none -
fig|6666666.148659.peg.1580 CDS NC_002950.2 1721335 1720025 -1 - 1311 DNA-damage-inducible protein F - none -
fig|6666666.148659.peg.1581 CDS NC_002950.2 1721853 1721350 -3 - 504 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster
fig|6666666.148659.peg.1582 CDS NC_002950.2 1724068 1721861 -1 - 2208 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.148659.peg.1583 CDS NC_002950.2 1724367 1724104 -3 - 264 FIG00936285: hypothetical protein - none -
fig|6666666.148659.peg.1584 CDS NC_002950.2 1725559 1724771 -1 - 789 Mobile element protein - none -
fig|6666666.148659.peg.1585 CDS NC_002950.2 1725960 1725763 -3 - 198 ISPg5, transposase Orf1 - none -
fig|6666666.148659.peg.1586 CDS NC_002950.2 1726413 1727834 3 + 1422 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis
fig|6666666.148659.peg.1587 CDS NC_002950.2 1727902 1730142 1 + 2241 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I Stringent Response, (p)ppGpp metabolism
fig|6666666.148659.peg.1588 CDS NC_002950.2 1730242 1730120 -1 - 123 hypothetical protein - none -
fig|6666666.148659.peg.1589 CDS NC_002950.2 1730466 1733453 3 + 2988 FIG00935997: hypothetical protein - none -
fig|6666666.148659.peg.1590 CDS NC_002950.2 1733501 1735270 2 + 1770 FIG00935583: hypothetical protein - none -
fig|6666666.148659.peg.1591 CDS NC_002950.2 1735295 1736518 2 + 1224 FIG00935655: hypothetical protein - none -
fig|6666666.148659.peg.1592 CDS NC_002950.2 1736550 1737221 3 + 672 D-alanyl-D-alanine dipeptidase (EC 3.4.13.22) - none -
fig|6666666.148659.peg.1593 CDS NC_002950.2 1737599 1739455 2 + 1857 Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2) - none -
fig|6666666.148659.peg.1594 CDS NC_002950.2 1739484 1741631 3 + 2148 Methylmalonyl-CoA mutase (EC 5.4.99.2) Propionyl-CoA to Succinyl-CoA Module
fig|6666666.148659.peg.1595 CDS NC_002950.2 1742994 1741837 -3 - 1158 Mobile element protein - none -
fig|6666666.148659.peg.1596 CDS NC_002950.2 1743837 1743445 -3 - 393 hypothetical protein - none -
fig|6666666.148659.peg.1597 CDS NC_002950.2 1744376 1743834 -2 - 543 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.148659.peg.1598 CDS NC_002950.2 1744811 1744626 -2 - 186 hypothetical protein - none -
fig|6666666.148659.peg.1599 CDS NC_002950.2 1744843 1745250 1 + 408 FIG00936421: hypothetical protein - none -
fig|6666666.148659.peg.1600 CDS NC_002950.2 1745269 1745928 1 + 660 ABC transporter ATP-binding protein YvcR - none -
fig|6666666.148659.peg.1601 CDS NC_002950.2 1745953 1747227 1 + 1275 ABC transporter permease protein - none -
fig|6666666.148659.peg.1602 CDS NC_002950.2 1747250 1748512 2 + 1263 ABC transporter permease protein - none -
fig|6666666.148659.peg.1603 CDS NC_002950.2 1748582 1749688 2 + 1107 Membrane fusion efflux protein - none -
fig|6666666.148659.peg.1604 CDS NC_002950.2 1749685 1751052 1 + 1368 Outer membrane efflux protein - none -
fig|6666666.148659.peg.1605 CDS NC_002950.2 1751246 1751374 2 + 129 hypothetical protein - none -
fig|6666666.148659.peg.1606 CDS NC_002950.2 1751652 1751503 -3 - 150 hypothetical protein - none -
fig|6666666.148659.peg.1607 CDS NC_002950.2 1751802 1751984 3 + 183 hypothetical protein - none -
fig|6666666.148659.peg.1608 CDS NC_002950.2 1755702 1755559 -3 - 144 hypothetical protein - none -
fig|6666666.148659.peg.1609 CDS NC_002950.2 1755913 1755785 -1 - 129 hypothetical protein - none -
fig|6666666.148659.peg.1610 CDS NC_002950.2 1757696 1757565 -2 - 132 hypothetical protein - none -
fig|6666666.148659.peg.1611 CDS NC_002950.2 1757814 1758233 3 + 420 hypothetical protein - none -
fig|6666666.148659.peg.1612 CDS NC_002950.2 1758528 1759685 3 + 1158 Mobile element protein - none -
fig|6666666.148659.peg.1613 CDS NC_002950.2 1759812 1760174 3 + 363 hemagglutinin-related protein - none -
fig|6666666.148659.peg.1614 CDS NC_002950.2 1760174 1760386 2 + 213 hemagglutinin-related protein - none -
fig|6666666.148659.peg.1615 CDS NC_002950.2 1762186 1760579 -1 - 1608 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.148659.peg.1616 CDS NC_002950.2 1762482 1763738 3 + 1257 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.148659.peg.1617 CDS NC_002950.2 1763858 1765330 2 + 1473 FIG00936249: hypothetical protein - none -
fig|6666666.148659.peg.1618 CDS NC_002950.2 1765366 1765578 1 + 213 ATP-binding protein - none -
fig|6666666.148659.peg.1619 CDS NC_002950.2 1765568 1766065 2 + 498 ATP-binding protein - none -
fig|6666666.148659.peg.1620 CDS NC_002950.2 1766158 1766027 -1 - 132 hypothetical protein - none -
fig|6666666.148659.peg.1621 CDS NC_002950.2 1766552 1768528 2 + 1977 Putative glycogen debranching enzyme, archaeal type, TIGR01561 Glycogen metabolism
fig|6666666.148659.peg.1622 CDS NC_002950.2 1768525 1769787 1 + 1263 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.148659.peg.1623 CDS NC_002950.2 1769784 1771070 3 + 1287 Alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.148659.peg.1624 CDS NC_002950.2 1771067 1771543 2 + 477 hypothetical protein - none -
fig|6666666.148659.peg.1625 CDS NC_002950.2 1772294 1772121 -2 - 174 hypothetical protein - none -
fig|6666666.148659.peg.1626 CDS NC_002950.2 1773088 1772306 -1 - 783 FIG00939003: hypothetical protein - none -
fig|6666666.148659.peg.1627 CDS NC_002950.2 1773459 1773328 -3 - 132 hypothetical protein - none -
fig|6666666.148659.peg.1628 CDS NC_002950.2 1774291 1773902 -1 - 390 HIT family protein - none -
fig|6666666.148659.peg.1629 CDS NC_002950.2 1774932 1774306 -3 - 627 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.148659.peg.1630 CDS NC_002950.2 1775863 1775261 -1 - 603 Hypothetical YciO protein, TsaC/YrdC paralog - none -
fig|6666666.148659.peg.1631 CDS NC_002950.2 1776574 1775870 -1 - 705 Conserved domain protein - none -
fig|6666666.148659.peg.1632 CDS NC_002950.2 1777263 1776604 -3 - 660 Lipoprotein releasing system ATP-binding protein LolD Lipoprotein sorting system
fig|6666666.148659.peg.1633 CDS NC_002950.2 1777982 1777260 -2 - 723 Molybdopterin biosynthesis protein MoeB - none -
fig|6666666.148659.peg.1634 CDS NC_002950.2 1779016 1778006 -1 - 1011 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.148659.peg.1635 CDS NC_002950.2 1779750 1779628 -3 - 123 hypothetical protein - none -
fig|6666666.148659.peg.1636 CDS NC_002950.2 1780137 1781150 3 + 1014 type II DNA modification methyltransferase, putative - none -
fig|6666666.148659.peg.1637 CDS NC_002950.2 1781160 1785134 3 + 3975 Type II restriction endonuclease - none -
fig|6666666.148659.peg.1638 CDS NC_002950.2 1788043 1786235 -1 - 1809 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.148659.peg.1639 CDS NC_002950.2 1790000 1788036 -2 - 1965 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.148659.peg.1640 CDS NC_002950.2 1790843 1790058 -2 - 786 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.148659.peg.1641 CDS NC_002950.2 1792909 1790861 -1 - 2049 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.148659.peg.1642 CDS NC_002950.2 1793919 1792945 -3 - 975 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.148659.peg.1643 CDS NC_002950.2 1794301 1793939 -1 - 363 FIG00936163: hypothetical protein - none -
fig|6666666.148659.peg.1644 CDS NC_002950.2 1794675 1794322 -3 - 354 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.148659.peg.1645 CDS NC_002950.2 1795092 1794928 -3 - 165 Mobile element protein - none -
fig|6666666.148659.peg.1646 CDS NC_002950.2 1795246 1795443 1 + 198 ISPg5, transposase Orf1 - none -
fig|6666666.148659.peg.1647 CDS NC_002950.2 1795647 1796435 3 + 789 Mobile element protein - none -
fig|6666666.148659.peg.1648 CDS NC_002950.2 1799045 1796742 -2 - 2304 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.148659.peg.1649 CDS NC_002950.2 1801415 1799070 -2 - 2346 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.148659.peg.1650 CDS NC_002950.2 1801868 1801497 -2 - 372 Rhodanese-like domain protein - none -
fig|6666666.148659.peg.1651 CDS NC_002950.2 1802582 1801938 -2 - 645 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.148659.peg.1652 CDS NC_002950.2 1802765 1802881 2 + 117 transposase in ISPg1 - none -
fig|6666666.148659.peg.1653 CDS NC_002950.2 1806263 1803483 -2 - 2781 FIG00935738: hypothetical protein - none -
fig|6666666.148659.peg.1654 CDS NC_002950.2 1806463 1806585 1 + 123 hypothetical protein - none -
fig|6666666.148659.peg.1655 CDS NC_002950.2 1806889 1808739 1 + 1851 ABC transporter, ATP-binding protein, MsbA family - none -
fig|6666666.148659.peg.1656 CDS NC_002950.2 1808773 1810284 1 + 1512 putative auxin-regulated protein - none -
fig|6666666.148659.peg.1657 CDS NC_002950.2 1810337 1812532 2 + 2196 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.148659.peg.1658 CDS NC_002950.2 1813209 1813463 3 + 255 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.148659.peg.1659 CDS NC_002950.2 1813881 1814906 3 + 1026 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.148659.peg.1660 CDS NC_002950.2 1814906 1815388 2 + 483 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS DNA repair system including RecA, MutS and a hypothetical protein;
NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.148659.peg.1661 CDS NC_002950.2 1815427 1816839 1 + 1413 PDZ domain protein - none -
fig|6666666.148659.peg.1662 CDS NC_002950.2 1816849 1817712 1 + 864 FIG00935924: hypothetical protein - none -
fig|6666666.148659.peg.1663 CDS NC_002950.2 1817745 1818236 3 + 492 cytidine/deoxycytidylate deaminase family protein( EC:3.5.4.3 ) - none -
fig|6666666.148659.peg.1664 CDS NC_002950.2 1818935 1818432 -2 - 504 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.148659.peg.1665 CDS NC_002950.2 1819667 1819017 -2 - 651 O-methyltransferase - none -
fig|6666666.148659.peg.1666 CDS NC_002950.2 1820193 1819768 -3 - 426 3-dehydroquinate dehydratase II (EC 4.2.1.10) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.148659.peg.1667 CDS NC_002950.2 1820311 1821237 1 + 927 integrase/recombinase XerD - none -
fig|6666666.148659.peg.1668 CDS NC_002950.2 1821713 1821276 -2 - 438 FIG00936714: hypothetical protein - none -
fig|6666666.148659.peg.1669 CDS NC_002950.2 1822621 1821710 -1 - 912 FIG00936023: hypothetical protein - none -
fig|6666666.148659.peg.1670 CDS NC_002950.2 1823055 1822618 -3 - 438 MutT/nudix family protein - none -
fig|6666666.148659.peg.1671 CDS NC_002950.2 1823492 1823157 -2 - 336 Glucokinase (EC 2.7.1.2) Glycolysis and Gluconeogenesis
fig|6666666.148659.peg.1672 CDS NC_002950.2 1824116 1823574 -2 - 543 Glucokinase (EC 2.7.1.2) Glycolysis and Gluconeogenesis
fig|6666666.148659.peg.1673 CDS NC_002950.2 1825221 1824187 -3 - 1035 FIG00936071: hypothetical protein - none -
fig|6666666.148659.peg.1674 CDS NC_002950.2 1825799 1825218 -2 - 582 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.148659.peg.1675 CDS NC_002950.2 1827373 1825946 -1 - 1428 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.148659.peg.1676 CDS NC_002950.2 1828438 1827620 -1 - 819 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation;
KDO2-Lipid A biosynthesis
fig|6666666.148659.peg.1677 CDS NC_002950.2 1831114 1829525 -1 - 1590 Uridine kinase (EC 2.7.1.48) pyrimidine conversions
fig|6666666.148659.peg.1678 CDS NC_002950.2 1832320 1831190 -1 - 1131 Mobile element protein - none -
fig|6666666.148659.peg.1679 CDS NC_002950.2 1832905 1832468 -1 - 438 Ribose 5-phosphate isomerase B (EC 5.3.1.6) Pentose phosphate pathway
fig|6666666.148659.peg.1680 CDS NC_002950.2 1835019 1832992 -3 - 2028 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.148659.peg.1681 CDS NC_002950.2 1835463 1837283 3 + 1821 glycosyl hydrolase family 29 (alpha-L-fucosidase) - none -
fig|6666666.148659.peg.1682 CDS NC_002950.2 1837420 1838550 1 + 1131 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.148659.peg.1683 CDS NC_002950.2 1838534 1838758 2 + 225 FIG00936261: hypothetical protein - none -
fig|6666666.148659.peg.1684 CDS NC_002950.2 1838755 1839801 1 + 1047 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.148659.peg.1685 CDS NC_002950.2 1839819 1842344 3 + 2526 ApeH acylamino-acid-releasing enzyme (EC 3.4.19.1) - none -
fig|6666666.148659.peg.1686 CDS NC_002950.2 1843368 1842487 -3 - 882 Fructose-bisphosphate aldolase class I (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.148659.peg.1687 CDS NC_002950.2 1845052 1844021 -1 - 1032 FIG00935720: hypothetical protein - none -
fig|6666666.148659.peg.1688 CDS NC_002950.2 1845325 1845594 1 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.148659.peg.1689 CDS NC_002950.2 1845798 1845610 -3 - 189 hypothetical protein - none -
fig|6666666.148659.peg.1690 CDS NC_002950.2 1845815 1846657 2 + 843 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.148659.peg.1691 CDS NC_002950.2 1846662 1847276 3 + 615 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.148659.peg.1692 CDS NC_002950.2 1847353 1847799 1 + 447 acetyltransferase, GNAT family - none -
fig|6666666.148659.peg.1693 CDS NC_002950.2 1848017 1850962 2 + 2946 Protein-export membrane protein SecD (TC 3.A.5.1.1) / Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832;
CBSS-211586.1.peg.2832
fig|6666666.148659.peg.1694 CDS NC_002950.2 1851865 1851089 -1 - 777 Ribonuclease III (EC 3.1.26.3) RNA processing and degradation, bacterial
fig|6666666.148659.peg.1695 CDS NC_002950.2 1853142 1851886 -3 - 1257 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.148659.peg.1696 CDS NC_002950.2 1853388 1853152 -3 - 237 Acyl carrier protein Fatty Acid Biosynthesis FASII
fig|6666666.148659.peg.1697 CDS NC_002950.2 1853557 1854138 1 + 582 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.148659.peg.1698 CDS NC_002950.2 1854153 1855175 3 + 1023 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148659.peg.1699 CDS NC_002950.2 1855201 1856742 1 + 1542 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.148659.peg.1700 CDS NC_002950.2 1856747 1857070 2 + 324 FIG00935993: hypothetical protein - none -
fig|6666666.148659.peg.1701 CDS NC_002950.2 1857966 1857460 -3 - 507 hypothetical protein - none -
fig|6666666.148659.peg.1702 CDS NC_002950.2 1858178 1859200 2 + 1023 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.148659.peg.1703 CDS NC_002950.2 1859219 1859893 2 + 675 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.148659.peg.1704 CDS NC_002950.2 1859955 1861292 3 + 1338 PAP2 superfamily protein - none -
fig|6666666.148659.peg.1705 CDS NC_002950.2 1864637 1861269 -2 - 3369 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.148659.peg.1706 CDS NC_002950.2 1864984 1865568 1 + 585 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.148659.peg.1707 CDS NC_002950.2 1865611 1866762 1 + 1152 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.148659.peg.1708 CDS NC_002950.2 1866848 1867165 2 + 318 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.148659.peg.1709 CDS NC_002950.2 1867194 1867982 3 + 789 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.148659.peg.1710 CDS NC_002950.2 1868064 1868558 3 + 495 COG2110, Macro domain, possibly ADP-ribose binding module - none -
fig|6666666.148659.peg.1711 CDS NC_002950.2 1868926 1870113 1 + 1188 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148659.peg.1712 CDS NC_002950.2 1870163 1870792 2 + 630 Uridine kinase (EC 2.7.1.48) pyrimidine conversions
fig|6666666.148659.peg.1713 CDS NC_002950.2 1870834 1872021 1 + 1188 FIG00936205: hypothetical protein - none -
fig|6666666.148659.peg.1714 CDS NC_002950.2 1872008 1872718 2 + 711 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster - none -
fig|6666666.148659.peg.1715 CDS NC_002950.2 1872706 1873500 1 + 795 putative polysaccharide deacetylase - none -
fig|6666666.148659.peg.1716 CDS NC_002950.2 1873882 1873733 -1 - 150 Mobile element protein - none -
fig|6666666.148659.peg.1717 CDS NC_002950.2 1874498 1875382 2 + 885 FIG00936395: hypothetical protein - none -
fig|6666666.148659.peg.1718 CDS NC_002950.2 1875947 1875531 -2 - 417 Mobile element protein - none -
fig|6666666.148659.peg.1719 CDS NC_002950.2 1876185 1877387 3 + 1203 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.148659.peg.1720 CDS NC_002950.2 1879543 1877507 -1 - 2037 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) Protein degradation
fig|6666666.148659.peg.1721 CDS NC_002950.2 1880969 1879560 -2 - 1410 FIG00936114: hypothetical protein - none -
fig|6666666.148659.peg.1722 CDS NC_002950.2 1881256 1881041 -1 - 216 FIG00936536: hypothetical protein - none -
fig|6666666.148659.peg.1723 CDS NC_002950.2 1881762 1884065 3 + 2304 sodium/hydrogen antiporter - none -
fig|6666666.148659.peg.1724 CDS NC_002950.2 1884062 1886068 2 + 2007 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism
fig|6666666.148659.peg.1725 CDS NC_002950.2 1886118 1888898 3 + 2781 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.148659.peg.1726 CDS NC_002950.2 1889866 1889045 -1 - 822 FIG00936443: hypothetical protein - none -
fig|6666666.148659.peg.1727 CDS NC_002950.2 1889908 1890030 1 + 123 hypothetical protein - none -
fig|6666666.148659.peg.1728 CDS NC_002950.2 1890153 1893038 3 + 2886 FIG00936088: hypothetical protein - none -
fig|6666666.148659.peg.1729 CDS NC_002950.2 1894335 1893118 -3 - 1218 immunoreactive 46 kDa antigen PG99 - none -
fig|6666666.148659.peg.1730 CDS NC_002950.2 1894906 1895046 1 + 141 hypothetical protein - none -
fig|6666666.148659.peg.1731 CDS NC_002950.2 1895086 1895676 1 + 591 V-type ATP synthase subunit E (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148659.peg.1732 CDS NC_002950.2 1895680 1896618 1 + 939 V-type ATP synthase subunit C (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148659.peg.1733 CDS NC_002950.2 1896628 1898382 1 + 1755 V-type ATP synthase subunit A (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148659.peg.1734 CDS NC_002950.2 1898394 1899713 3 + 1320 V-type ATP synthase subunit B (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148659.peg.1735 CDS NC_002950.2 1899789 1900343 3 + 555 V-type ATP synthase subunit D (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148659.peg.1736 CDS NC_002950.2 1900340 1902154 2 + 1815 V-type ATP synthase subunit I (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148659.peg.1737 CDS NC_002950.2 1902209 1902685 2 + 477 V-type ATP synthase subunit K (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.148659.peg.1738 CDS NC_002950.2 1905333 1903045 -3 - 2289 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.148659.peg.1739 CDS NC_002950.2 1905355 1905468 1 + 114 FIG00935756: hypothetical protein - none -
fig|6666666.148659.peg.1740 CDS NC_002950.2 1906126 1905581 -1 - 546 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) - none -
fig|6666666.148659.peg.1741 CDS NC_002950.2 1906862 1906155 -2 - 708 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) - none -
fig|6666666.148659.peg.1742 CDS NC_002950.2 1907115 1906936 -3 - 180 FIG00936116: hypothetical protein - none -
fig|6666666.148659.peg.1743 CDS NC_002950.2 1908218 1907136 -2 - 1083 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) - none -
fig|6666666.148659.peg.1744 CDS NC_002950.2 1908464 1908237 -2 - 228 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) - none -
fig|6666666.148659.peg.1745 CDS NC_002950.2 1910717 1908696 -2 - 2022 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.148659.peg.1746 CDS NC_002950.2 1911523 1910759 -1 - 765 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis
fig|6666666.148659.peg.1747 CDS NC_002950.2 1912041 1911520 -3 - 522 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.148659.peg.1748 CDS NC_002950.2 1913125 1912310 -1 - 816 Cytochrome c biogenesis protein CcsA - none -
fig|6666666.148659.peg.1749 CDS NC_002950.2 1913804 1913118 -2 - 687 FIG00935607: hypothetical protein - none -
fig|6666666.148659.peg.1750 CDS NC_002950.2 1914412 1913786 -1 - 627 FIG00935607: hypothetical protein - none -
fig|6666666.148659.peg.1751 CDS NC_002950.2 1915979 1914483 -2 - 1497 Cytochrome c552 precursor (EC 1.7.2.2) Nitrate and nitrite ammonification;
Soluble cytochromes and functionally related electron carriers
fig|6666666.148659.peg.1752 CDS NC_002950.2 1916264 1916001 -2 - 264 Cytochrome c nitrite reductase, small subunit NrfH Nitrate and nitrite ammonification
fig|6666666.148659.peg.1753 CDS NC_002950.2 1917385 1917257 -1 - 129 hypothetical protein - none -
fig|6666666.148659.peg.1754 CDS NC_002950.2 1917496 1918110 1 + 615 FIG00936526: hypothetical protein - none -
fig|6666666.148659.peg.1755 CDS NC_002950.2 1919520 1918243 -3 - 1278 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis
fig|6666666.148659.peg.1756 CDS NC_002950.2 1920155 1919736 -2 - 420 FIG00936527: hypothetical protein - none -
fig|6666666.148659.peg.1757 CDS NC_002950.2 1920292 1920795 1 + 504 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.148659.peg.1758 CDS NC_002950.2 1921226 1921014 -2 - 213 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148659.peg.1759 CDS NC_002950.2 1923070 1921397 -1 - 1674 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.148659.peg.1760 CDS NC_002950.2 1925668 1923545 -1 - 2124 ATP-dependent DNA helicase RecS (RecQ family) DNA repair, bacterial RecFOR pathway
fig|6666666.148659.peg.1761 CDS NC_002950.2 1926327 1926076 -3 - 252 FIG00936086: hypothetical protein - none -
fig|6666666.148659.peg.1762 CDS NC_002950.2 1926295 1927110 1 + 816 Similar to glycogen synthase (EC 2.4.1.21) - none -
fig|6666666.148659.peg.1763 CDS NC_002950.2 1927246 1928580 1 + 1335 hypothetical protein - none -
fig|6666666.148659.peg.1764 CDS NC_002950.2 1928596 1929918 1 + 1323 Nucleoside permease NupG - none -
fig|6666666.148659.peg.1765 CDS NC_002950.2 1930309 1936794 1 + 6486 hemagglutinin, putative - none -
fig|6666666.148659.peg.1766 CDS NC_002950.2 1936904 1937023 2 + 120 hypothetical protein - none -
fig|6666666.148659.peg.1767 CDS NC_002950.2 1937242 1937355 1 + 114 hypothetical protein - none -
fig|6666666.148659.peg.1768 CDS NC_002950.2 1937450 1938373 2 + 924 FIG00936386: hypothetical protein - none -
fig|6666666.148659.peg.1769 CDS NC_002950.2 1938354 1939373 3 + 1020 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.148659.peg.1770 CDS NC_002950.2 1939653 1939468 -3 - 186 hypothetical protein - none -
fig|6666666.148659.peg.1771 CDS NC_002950.2 1940189 1940022 -2 - 168 hypothetical protein - none -
fig|6666666.148659.peg.1772 CDS NC_002950.2 1940181 1945016 3 + 4836 hemagglutinin, putative - none -
fig|6666666.148659.peg.1773 CDS NC_002950.2 1945284 1945640 3 + 357 Mobile element protein - none -
fig|6666666.148659.peg.1774 CDS NC_002950.2 1945655 1945915 2 + 261 Mobile element protein - none -
fig|6666666.148659.peg.1775 CDS NC_002950.2 1945940 1946125 2 + 186 hypothetical protein - none -
fig|6666666.148659.peg.1776 CDS NC_002950.2 1946177 1946314 2 + 138 hypothetical protein - none -
fig|6666666.148659.peg.1777 CDS NC_002950.2 1946697 1946317 -3 - 381 Endoribonuclease L-PSP - none -
fig|6666666.148659.peg.1778 CDS NC_002950.2 1947472 1946723 -1 - 750 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.148659.peg.1779 CDS NC_002950.2 1949124 1947469 -3 - 1656 DNA repair protein RecN DNA repair, bacterial
fig|6666666.148659.peg.1780 CDS NC_002950.2 1950047 1949139 -2 - 909 FIG00935642: hypothetical protein - none -
fig|6666666.148659.peg.1781 CDS NC_002950.2 1951258 1950044 -1 - 1215 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.148659.peg.1782 CDS NC_002950.2 1952063 1951284 -2 - 780 DNA Pol III Epsilon Chain - none -
fig|6666666.148659.peg.1783 CDS NC_002950.2 1953209 1952076 -2 - 1134 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.148659.peg.1784 CDS NC_002950.2 1953972 1953415 -3 - 558 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.148659.peg.1785 CDS NC_002950.2 1955566 1953932 -1 - 1635 carboxy-terminal processing protease precursor - none -
fig|6666666.148659.peg.1786 CDS NC_002950.2 1956023 1955574 -2 - 450 dCMP deaminase (EC 3.5.4.12) - none -
fig|6666666.148659.peg.1787 CDS NC_002950.2 1956463 1956110 -1 - 354 hypothetical protein - none -
fig|6666666.148659.peg.1788 CDS NC_002950.2 1957125 1956628 -3 - 498 Flavodoxin 1 Flavodoxin
fig|6666666.148659.peg.1789 CDS NC_002950.2 1958412 1957264 -3 - 1149 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycine and Serine Utilization
fig|6666666.148659.peg.1790 CDS NC_002950.2 1959848 1958664 -2 - 1185 FIG00935464: hypothetical protein - none -
fig|6666666.148659.peg.1791 CDS NC_002950.2 1960147 1959977 -1 - 171 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycine and Serine Utilization
fig|6666666.148659.peg.1792 CDS NC_002950.2 1960417 1960160 -1 - 258 hypothetical protein - none -
fig|6666666.148659.peg.1793 CDS NC_002950.2 1960606 1960454 -1 - 153 hypothetical protein - none -
fig|6666666.148659.peg.1794 CDS NC_002950.2 1964399 1960599 -2 - 3801 internalin, putative Listeria surface proteins: Internalin-like proteins
fig|6666666.148659.peg.1795 CDS NC_002950.2 1964671 1964796 1 + 126 hypothetical protein - none -
fig|6666666.148659.peg.1796 CDS NC_002950.2 1965038 1964925 -2 - 114 hypothetical protein - none -
fig|6666666.148659.peg.1797 CDS NC_002950.2 1965709 1965188 -1 - 522 membrane protein, putative - none -
fig|6666666.148659.peg.1798 CDS NC_002950.2 1965912 1965745 -3 - 168 FIG00936346: hypothetical protein - none -
fig|6666666.148659.peg.1799 CDS NC_002950.2 1966623 1965958 -3 - 666 methlytransferase, UbiE/COQ5 family - none -
fig|6666666.148659.peg.1800 CDS NC_002950.2 1969001 1967022 -2 - 1980 Urocanate hydratase (EC 4.2.1.49) Histidine Degradation
fig|6666666.148659.peg.1801 CDS NC_002950.2 1969750 1969343 -1 - 408 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.148659.peg.1802 CDS NC_002950.2 1970711 1969737 -2 - 975 hemolysin - none -
fig|6666666.148659.peg.1803 CDS NC_002950.2 1971550 1970723 -1 - 828 Hemolysin A - none -
fig|6666666.148659.peg.1804 CDS NC_002950.2 1972937 1971579 -2 - 1359 Na+/H+ antiporter NhaA type NhaA, NhaD and Sodium-dependent phosphate transporters
fig|6666666.148659.peg.1805 CDS NC_002950.2 1973068 1974540 1 + 1473 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.148659.peg.1806 CDS NC_002950.2 1974591 1975610 3 + 1020 FIG00936465: hypothetical protein - none -
fig|6666666.148659.peg.1807 CDS NC_002950.2 1975621 1976631 1 + 1011 Glycosyltransferase - none -
fig|6666666.148659.peg.1808 CDS NC_002950.2 1976664 1978106 3 + 1443 FIG00936489: hypothetical protein - none -
fig|6666666.148659.peg.1809 CDS NC_002950.2 1978846 1978673 -1 - 174 hypothetical protein - none -
fig|6666666.148659.peg.1810 CDS NC_002950.2 1981154 1979058 -2 - 2097 Alpha-L-fucosidase (EC 3.2.1.51) - none -
fig|6666666.148659.peg.1811 CDS NC_002950.2 1983173 1981155 -2 - 2019 Polyphosphate kinase (EC 2.7.4.1) Phosphate metabolism;
Polyphosphate;
Purine conversions
fig|6666666.148659.peg.1812 CDS NC_002950.2 1984626 1983406 -3 - 1221 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.148659.peg.1813 CDS NC_002950.2 1984705 1985739 1 + 1035 Selenophosphate-dependent tRNA 2-selenouridine synthase Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.148659.peg.1814 CDS NC_002950.2 1985736 1986350 3 + 615 Hypothetical protein Cj1505c - none -
fig|6666666.148659.peg.1815 CDS NC_002950.2 1986491 1987150 2 + 660 FIG00936641: hypothetical protein - none -
fig|6666666.148659.peg.1816 CDS NC_002950.2 1987719 1987564 -3 - 156 hypothetical protein - none -
fig|6666666.148659.peg.1817 CDS NC_002950.2 1987711 1987932 1 + 222 lipoprotein, putative - none -
fig|6666666.148659.peg.1818 CDS NC_002950.2 1988333 1988491 2 + 159 hypothetical protein - none -
fig|6666666.148659.peg.1819 CDS NC_002950.2 1988553 1989611 3 + 1059 FIG00936030: hypothetical protein - none -
fig|6666666.148659.peg.1820 CDS NC_002950.2 1989733 1989951 1 + 219 FIG00936030: hypothetical protein - none -
fig|6666666.148659.peg.1821 CDS NC_002950.2 1990596 1990787 3 + 192 hypothetical protein - none -
fig|6666666.148659.peg.1822 CDS NC_002950.2 1991208 1991873 3 + 666 FIG00935701: hypothetical protein - none -
fig|6666666.148659.peg.1823 CDS NC_002950.2 1992191 1992316 2 + 126 hypothetical protein - none -
fig|6666666.148659.peg.1824 CDS NC_002950.2 1992417 1992995 3 + 579 hypothetical protein - none -
fig|6666666.148659.peg.1825 CDS NC_002950.2 1993602 1994300 3 + 699 FIG00936372: hypothetical protein - none -
fig|6666666.148659.peg.1826 CDS NC_002950.2 1994726 1996015 2 + 1290 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Degradation
fig|6666666.148659.peg.1827 CDS NC_002950.2 1996820 1996143 -2 - 678 Thiamin pyrophosphokinase (EC 2.7.6.2) Thiamin biosynthesis
fig|6666666.148659.peg.1828 CDS NC_002950.2 1997425 1996817 -1 - 609 Predicted thiamin transporter PnuT Thiamin biosynthesis
fig|6666666.148659.peg.1829 CDS NC_002950.2 1999814 1997430 -2 - 2385 Thiamin-regulated outer membrane receptor Omr1 Thiamin biosynthesis
fig|6666666.148659.peg.1830 CDS NC_002950.2 2000836 1999889 -1 - 948 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.148659.peg.1831 CDS NC_002950.2 2001481 2000921 -1 - 561 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.148659.peg.1832 CDS NC_002950.2 2002237 2001518 -1 - 720 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.148659.peg.1833 CDS NC_002950.2 2004311 2002320 -2 - 1992 FIG00898950: hypothetical protein - none -
fig|6666666.148659.peg.1834 CDS NC_002950.2 2004471 2004337 -3 - 135 hypothetical protein - none -
fig|6666666.148659.peg.1835 CDS NC_002950.2 2005261 2005001 -1 - 261 Mobile element protein - none -
fig|6666666.148659.peg.1836 CDS NC_002950.2 2005262 2005525 2 + 264 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.148659.peg.1837 CDS NC_002950.2 2005547 2006632 2 + 1086 Mobile element protein - none -
fig|6666666.148659.peg.1838 CDS NC_002950.2 2007246 2006695 -3 - 552 Mobile element protein - none -
fig|6666666.148659.peg.1839 CDS NC_002950.2 2007935 2008780 2 + 846 hypothetical protein - none -
fig|6666666.148659.peg.1840 CDS NC_002950.2 2009789 2009079 -2 - 711 Mobile element protein - none -
fig|6666666.148659.peg.1841 CDS NC_002950.2 2010160 2009804 -1 - 357 Mobile element protein - none -
fig|6666666.148659.peg.1842 CDS NC_002950.2 2010827 2010372 -2 - 456 LSU ribosomal protein L17p - none -
fig|6666666.148659.peg.1843 CDS NC_002950.2 2011852 2010860 -1 - 993 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.148659.peg.1844 CDS NC_002950.2 2012470 2011865 -1 - 606 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.148659.peg.1845 CDS NC_002950.2 2013016 2012630 -1 - 387 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.148659.peg.1846 CDS NC_002950.2 2013408 2013028 -3 - 381 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.148659.peg.1847 CDS NC_002950.2 2013557 2013441 -2 - 117 LSU ribosomal protein L36p - none -
fig|6666666.148659.peg.1848 CDS NC_002950.2 2013792 2013574 -3 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.148659.peg.1849 CDS NC_002950.2 2014544 2013795 -2 - 750 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.148659.peg.1850 CDS NC_002950.2 2015920 2014580 -1 - 1341 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.148659.peg.1851 CDS NC_002950.2 2016209 2015925 -2 - 285 LSU ribosomal protein L15p (L27Ae) - none -
fig|6666666.148659.peg.1852 CDS NC_002950.2 2016766 2016593 -1 - 174 SSU ribosomal protein S5p (S2e) Ribosomal protein S5p acylation;
Ribosome SSU bacterial
fig|6666666.148659.peg.1853 CDS NC_002950.2 2017461 2017117 -3 - 345 LSU ribosomal protein L18p (L5e) - none -
fig|6666666.148659.peg.1854 CDS NC_002950.2 2017887 2017480 -3 - 408 LSU ribosomal protein L6p (L9e) - none -
fig|6666666.148659.peg.1855 CDS NC_002950.2 2018397 2018050 -3 - 348 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.148659.peg.1856 CDS NC_002950.2 2018765 2018496 -2 - 270 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.148659.peg.1857 CDS NC_002950.2 2019327 2018767 -3 - 561 LSU ribosomal protein L5p (L11e) - none -
fig|6666666.148659.peg.1858 CDS NC_002950.2 2019611 2019327 -2 - 285 LSU ribosomal protein L24p (L26e) - none -
fig|6666666.148659.peg.1859 CDS NC_002950.2 2020035 2019670 -3 - 366 LSU ribosomal protein L14p (L23e) - none -
fig|6666666.148659.peg.1860 CDS NC_002950.2 2020291 2020037 -1 - 255 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.148659.peg.1861 CDS NC_002950.2 2020499 2020305 -2 - 195 LSU ribosomal protein L29p (L35e) - none -
fig|6666666.148659.peg.1862 CDS NC_002950.2 2020891 2020505 -1 - 387 LSU ribosomal protein L16p (L10e) - none -
fig|6666666.148659.peg.1863 CDS NC_002950.2 2021700 2020960 -3 - 741 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.148659.peg.1864 CDS NC_002950.2 2022111 2021707 -3 - 405 LSU ribosomal protein L22p (L17e) - none -
fig|6666666.148659.peg.1865 CDS NC_002950.2 2022435 2022166 -3 - 270 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.148659.peg.1866 CDS NC_002950.2 2023282 2022458 -1 - 825 LSU ribosomal protein L2p (L8e) - none -
fig|6666666.148659.peg.1867 CDS NC_002950.2 2023582 2023289 -1 - 294 LSU ribosomal protein L23p (L23Ae) - none -
fig|6666666.148659.peg.1868 CDS NC_002950.2 2024226 2023597 -3 - 630 LSU ribosomal protein L4p (L1e) - none -
fig|6666666.148659.peg.1869 CDS NC_002950.2 2024813 2024226 -2 - 588 LSU ribosomal protein L3p (L3e) - none -
fig|6666666.148659.peg.1870 CDS NC_002950.2 2025171 2024866 -3 - 306 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.148659.peg.1871 CDS NC_002950.2 2027310 2025187 -3 - 2124 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.148659.peg.1872 CDS NC_002950.2 2027799 2027323 -3 - 477 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.148659.peg.1873 CDS NC_002950.2 2028296 2028036 -2 - 261 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.148659.peg.1874 CDS NC_002950.2 2030320 2029064 -1 - 1257 FIG00935796: hypothetical protein - none -
fig|6666666.148659.peg.1875 CDS NC_002950.2 2030552 2030385 -2 - 168 FIG00935518: hypothetical protein - none -
fig|6666666.148659.peg.1876 CDS NC_002950.2 2030508 2031815 3 + 1308 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.148659.peg.1877 CDS NC_002950.2 2031837 2032280 3 + 444 FIG00935916: hypothetical protein - none -
fig|6666666.148659.peg.1878 CDS NC_002950.2 2032273 2033079 1 + 807 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.148659.peg.1879 CDS NC_002950.2 2033066 2036554 2 + 3489 FIG00936378: hypothetical protein - none -
fig|6666666.148659.peg.1880 CDS NC_002950.2 2036750 2038000 2 + 1251 hypothetical protein - none -
fig|6666666.148659.peg.1881 CDS NC_002950.2 2039278 2038274 -1 - 1005 Malate dehydrogenase (EC 1.1.1.37) TCA Cycle
fig|6666666.148659.peg.1882 CDS NC_002950.2 2039616 2039410 -3 - 207 hypothetical protein - none -
fig|6666666.148659.peg.1883 CDS NC_002950.2 2039740 2040900 1 + 1161 Transporter - none -
fig|6666666.148659.peg.1884 CDS NC_002950.2 2041282 2042982 1 + 1701 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.148659.peg.1885 CDS NC_002950.2 2043058 2043657 1 + 600 Alkaline phosphatase like protein Phosphate metabolism
fig|6666666.148659.peg.1886 CDS NC_002950.2 2043714 2044649 3 + 936 putative transporter - none -
fig|6666666.148659.peg.1887 CDS NC_002950.2 2044653 2045672 3 + 1020 NAD-dependent epimerase/dehydratase family protein - none -
fig|6666666.148659.peg.1888 CDS NC_002950.2 2046082 2045909 -1 - 174 hypothetical protein - none -
fig|6666666.148659.peg.1889 CDS NC_002950.2 2047600 2046305 -1 - 1296 4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-) - none -
fig|6666666.148659.peg.1890 CDS NC_002950.2 2047820 2047707 -2 - 114 hypothetical protein - none -
fig|6666666.148659.peg.1891 CDS NC_002950.2 2047882 2048019 1 + 138 hypothetical protein - none -
fig|6666666.148659.peg.1892 CDS NC_002950.2 2048288 2048139 -2 - 150 hypothetical protein - none -
fig|6666666.148659.peg.1893 CDS NC_002950.2 2048495 2048307 -2 - 189 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent - none -
fig|6666666.148659.peg.1894 CDS NC_002950.2 2048717 2048514 -2 - 204 LSU ribosomal protein L28p - none -
fig|6666666.148659.peg.1895 CDS NC_002950.2 2051243 2048976 -2 - 2268 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.148659.peg.1896 CDS NC_002950.2 2052066 2051440 -3 - 627 FIG00936044: hypothetical protein - none -
fig|6666666.148659.peg.1897 CDS NC_002950.2 2052028 2052261 1 + 234 hypothetical protein - none -
fig|6666666.148659.peg.1898 CDS NC_002950.2 2052254 2052373 2 + 120 hypothetical protein - none -
fig|6666666.148659.peg.1899 CDS NC_002950.2 2052478 2053053 1 + 576 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.148659.peg.1900 CDS NC_002950.2 2053050 2054456 3 + 1407 bacterial sugar transferase - none -
fig|6666666.148659.peg.1901 CDS NC_002950.2 2054453 2055331 2 + 879 Chloride channel protein - none -
fig|6666666.148659.peg.1902 CDS NC_002950.2 2055381 2056247 3 + 867 Chloride channel protein - none -
fig|6666666.148659.peg.1903 CDS NC_002950.2 2057206 2056208 -1 - 999 FIG00936361: hypothetical protein - none -
fig|6666666.148659.peg.1904 CDS NC_002950.2 2057308 2058195 1 + 888 TPR-repeat-containing protein - none -
fig|6666666.148659.peg.1905 CDS NC_002950.2 2058311 2058541 2 + 231 hypothetical protein - none -
fig|6666666.148659.peg.1906 CDS NC_002950.2 2059710 2058703 -3 - 1008 hypothetical protein - none -
fig|6666666.148659.peg.1907 CDS NC_002950.2 2060211 2061263 3 + 1053 FIG00936307: hypothetical protein - none -
fig|6666666.148659.peg.1908 CDS NC_002950.2 2063145 2062054 -3 - 1092 FIG00935885: hypothetical protein - none -
fig|6666666.148659.peg.1909 CDS NC_002950.2 2063358 2064410 3 + 1053 FIG00936307: hypothetical protein - none -
fig|6666666.148659.peg.1910 CDS NC_002950.2 2064424 2064555 1 + 132 hypothetical protein - none -
fig|6666666.148659.peg.1911 CDS NC_002950.2 2066783 2064777 -2 - 2007 FIG00936766: hypothetical protein - none -
fig|6666666.148659.peg.1912 CDS NC_002950.2 2067403 2066813 -1 - 591 hypothetical protein - none -
fig|6666666.148659.peg.1913 CDS NC_002950.2 2067670 2067428 -1 - 243 hypothetical protein - none -
fig|6666666.148659.peg.1914 CDS NC_002950.2 2068020 2067850 -3 - 171 hypothetical protein - none -
fig|6666666.148659.peg.1915 CDS NC_002950.2 2069595 2069305 -3 - 291 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.148659.peg.1916 CDS NC_002950.2 2072710 2069615 -1 - 3096 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.148659.peg.1917 CDS NC_002950.2 2073532 2072771 -1 - 762 CRISPR-associated RAMP Cmr6 CRISP Cmr Cluster
fig|6666666.148659.peg.1918 CDS NC_002950.2 2073972 2073529 -3 - 444 CRISPR-associated RAMP Cmr5 CRISP Cmr Cluster
fig|6666666.148659.peg.1919 CDS NC_002950.2 2074652 2073969 -2 - 684 CRISPR-associated RAMP Cmr4 CRISP Cmr Cluster
fig|6666666.148659.peg.1920 CDS NC_002950.2 2075874 2074684 -3 - 1191 CRISPR-associated RAMP Cmr3 CRISP Cmr Cluster
fig|6666666.148659.peg.1921 CDS NC_002950.2 2077522 2075876 -1 - 1647 CRISPR-associated RAMP Cmr2 CRISP Cmr Cluster
fig|6666666.148659.peg.1922 CDS NC_002950.2 2078966 2077515 -2 - 1452 FIG00936276: hypothetical protein - none -
fig|6666666.148659.peg.1923 CDS NC_002950.2 2079224 2078973 -2 - 252 FIG00935910: hypothetical protein - none -
fig|6666666.148659.peg.1924 CDS NC_002950.2 2080809 2079226 -3 - 1584 FIG00935632: hypothetical protein - none -
fig|6666666.148659.peg.1925 CDS NC_002950.2 2081550 2083427 3 + 1878 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.148659.peg.1926 CDS NC_002950.2 2083458 2085260 3 + 1803 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.148659.peg.1927 CDS NC_002950.2 2085267 2085719 3 + 453 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.148659.peg.1928 CDS NC_002950.2 2085724 2086074 1 + 351 FIG00936480: hypothetical protein - none -
fig|6666666.148659.peg.1929 CDS NC_002950.2 2086061 2086930 2 + 870 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.148659.peg.1930 CDS NC_002950.2 2086971 2087132 3 + 162 FIG00935764: hypothetical protein - none -
fig|6666666.148659.peg.1931 CDS NC_002950.2 2088119 2087241 -2 - 879 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.148659.peg.1932 CDS NC_002950.2 2088923 2088273 -2 - 651 FIG00935689: hypothetical protein - none -
fig|6666666.148659.peg.1933 CDS NC_002950.2 2089513 2088932 -1 - 582 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.148659.peg.1934 CDS NC_002950.2 2090945 2089548 -2 - 1398 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.148659.peg.1935 CDS NC_002950.2 2091677 2090961 -2 - 717 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.148659.peg.1936 CDS NC_002950.2 2093075 2091738 -2 - 1338 dNTP triphosphohydrolase, broad substrate specificity, subgroup 3 Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.148659.peg.1937 CDS NC_002950.2 2094217 2093225 -1 - 993 Putative membrane protein YeiH - none -
fig|6666666.148659.peg.1938 CDS NC_002950.2 2094727 2095086 1 + 360 FIG00936356: hypothetical protein - none -
fig|6666666.148659.peg.1939 CDS NC_002950.2 2095383 2097884 3 + 2502 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.148659.peg.1940 CDS NC_002950.2 2098454 2099191 2 + 738 DNA recombination and repair protein RecO DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.148659.peg.1941 CDS NC_002950.2 2099264 2101012 2 + 1749 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.148659.peg.1942 CDS NC_002950.2 2101245 2101117 -3 - 129 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.1943 CDS NC_002950.2 2101980 2101270 -3 - 711 Mobile element protein - none -
fig|6666666.148659.peg.1944 CDS NC_002950.2 2102351 2101995 -2 - 357 Mobile element protein - none -
fig|6666666.148659.peg.1945 CDS NC_002950.2 2104062 2103913 -3 - 150 hypothetical protein - none -
fig|6666666.148659.peg.1946 CDS NC_002950.2 2104579 2104316 -1 - 264 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.148659.peg.1947 CDS NC_002950.2 2105595 2104579 -3 - 1017 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.148659.peg.1948 CDS NC_002950.2 2106104 2105592 -2 - 513 CRISPR-associated RecB family exonuclease Cas4a CRISPRs
fig|6666666.148659.peg.1949 CDS NC_002950.2 2108445 2106124 -3 - 2322 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.148659.peg.1950 CDS NC_002950.2 2109451 2108435 -1 - 1017 hypothetical protein - none -
fig|6666666.148659.peg.1951 CDS NC_002950.2 2110961 2109462 -2 - 1500 hypothetical protein - none -
fig|6666666.148659.peg.1952 CDS NC_002950.2 2111689 2110958 -1 - 732 hypothetical protein - none -
fig|6666666.148659.peg.1953 CDS NC_002950.2 2112363 2111698 -3 - 666 CRISPR-associated protein, TM1814 family - none -
fig|6666666.148659.peg.1954 CDS NC_002950.2 2114942 2113011 -2 - 1932 putative sulfatase - none -
fig|6666666.148659.peg.1955 CDS NC_002950.2 2117489 2114946 -2 - 2544 FIG00935645: hypothetical protein - none -
fig|6666666.148659.peg.1956 CDS NC_002950.2 2118626 2117655 -2 - 972 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.148659.peg.1957 CDS NC_002950.2 2124293 2119173 -2 - 5121 hemagglutinin, putative - none -
fig|6666666.148659.peg.1958 CDS NC_002950.2 2124985 2125605 1 + 621 Alpha-ribazole-5@1-phosphate phosphatase (EC 3.1.3.73) Cobalamin synthesis;
Coenzyme B12 biosynthesis;
Phosphoglycerate mutase protein family
fig|6666666.148659.peg.1959 CDS NC_002950.2 2125745 2126158 2 + 414 FIG00935520: hypothetical protein - none -
fig|6666666.148659.peg.1960 CDS NC_002950.2 2126167 2126676 1 + 510 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.148659.peg.1961 CDS NC_002950.2 2126710 2129262 1 + 2553 FIG00935826: hypothetical protein - none -
fig|6666666.148659.peg.1962 CDS NC_002950.2 2129935 2130468 1 + 534 FIG00936499: hypothetical protein - none -
fig|6666666.148659.peg.1963 CDS NC_002950.2 2130536 2130931 2 + 396 FIG00935940: hypothetical protein - none -
fig|6666666.148659.peg.1964 CDS NC_002950.2 2133471 2130958 -3 - 2514 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.148659.peg.1965 CDS NC_002950.2 2134977 2133505 -3 - 1473 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.148659.peg.1966 CDS NC_002950.2 2135791 2135000 -1 - 792 Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.148659.peg.1967 CDS NC_002950.2 2135992 2136669 1 + 678 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.148659.peg.1968 CDS NC_002950.2 2136701 2137612 2 + 912 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family Potassium homeostasis
fig|6666666.148659.peg.1969 CDS NC_002950.2 2137902 2137681 -3 - 222 hypothetical protein - none -
fig|6666666.148659.peg.1970 CDS NC_002950.2 2138297 2137899 -2 - 399 N-acetylmuramoyl-L-alanine amidase - none -
fig|6666666.148659.peg.1971 CDS NC_002950.2 2138964 2138488 -3 - 477 DNA-binding protein, histone-like family - none -
fig|6666666.148659.peg.1972 CDS NC_002950.2 2139111 2138980 -3 - 132 hypothetical protein - none -
fig|6666666.148659.peg.1973 CDS NC_002950.2 2140056 2139325 -3 - 732 FIG00935880: hypothetical protein - none -
fig|6666666.148659.peg.1974 CDS NC_002950.2 2141706 2140189 -3 - 1518 Thiol:disulfide interchange protein - none -
fig|6666666.148659.peg.1975 CDS NC_002950.2 2142222 2142109 -3 - 114 hypothetical protein - none -
fig|6666666.148659.peg.1976 CDS NC_002950.2 2142358 2143452 1 + 1095 UPF0135 protein Bsu YqfO @ Bsu YqfO NIF3/CutA domain - none -
fig|6666666.148659.peg.1977 CDS NC_002950.2 2143470 2144225 3 + 756 FIG137478: Hypothetical protein tRNA modification Bacteria
fig|6666666.148659.peg.1978 CDS NC_002950.2 2144333 2144473 2 + 141 hypothetical protein - none -
fig|6666666.148659.peg.1979 CDS NC_002950.2 2144489 2145853 2 + 1365 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.148659.peg.1980 CDS NC_002950.2 2148133 2145848 -1 - 2286 FIG00935898: hypothetical protein - none -
fig|6666666.148659.peg.1981 CDS NC_002950.2 2148574 2148224 -1 - 351 FIG00936505: hypothetical protein - none -
fig|6666666.148659.peg.1982 CDS NC_002950.2 2148994 2148617 -1 - 378 FIG00936046: hypothetical protein - none -
fig|6666666.148659.peg.1983 CDS NC_002950.2 2149524 2149249 -3 - 276 hypothetical protein - none -
fig|6666666.148659.peg.1984 CDS NC_002950.2 2149752 2150645 3 + 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.148659.peg.1985 CDS NC_002950.2 2150674 2151327 1 + 654 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148659.peg.1986 CDS NC_002950.2 2152104 2151433 -3 - 672 lipoprotein PG3 - none -
fig|6666666.148659.peg.1987 CDS NC_002950.2 2153150 2152170 -2 - 981 putative dihydropyrimidine dehydrogenase [NADP+] precursor - none -
fig|6666666.148659.peg.1988 CDS NC_002950.2 2154072 2154215 3 + 144 hypothetical protein - none -
fig|6666666.148659.peg.1989 CDS NC_002950.2 2155887 2155099 -3 - 789 Mobile element protein - none -
fig|6666666.148659.peg.1990 CDS NC_002950.2 2156288 2156091 -2 - 198 ISPg5, transposase Orf1 - none -
fig|6666666.148659.peg.1991 CDS NC_002950.2 2156442 2156783 3 + 342 Mobile element protein - none -
fig|6666666.148659.peg.1992 CDS NC_002950.2 2156798 2157508 2 + 711 Mobile element protein - none -
fig|6666666.148659.peg.1993 CDS NC_002950.2 2157533 2157661 2 + 129 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.1994 CDS NC_002950.2 2157713 2158516 2 + 804 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.148659.peg.1995 CDS NC_002950.2 2158562 2159050 2 + 489 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.148659.peg.1996 CDS NC_002950.2 2159111 2160475 2 + 1365 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.148659.peg.1997 CDS NC_002950.2 2160686 2160480 -2 - 207 FIG00936383: hypothetical protein - none -
fig|6666666.148659.peg.1998 CDS NC_002950.2 2160915 2161094 3 + 180 FIG00935767: hypothetical protein - none -
fig|6666666.148659.peg.1999 CDS NC_002950.2 2161140 2162165 3 + 1026 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.148659.peg.2000 CDS NC_002950.2 2162256 2163311 3 + 1056 FIG00936241: hypothetical protein - none -
fig|6666666.148659.peg.2001 CDS NC_002950.2 2163355 2164452 1 + 1098 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) ECSIG4-SIG7;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.148659.peg.2002 CDS NC_002950.2 2164474 2164932 1 + 459 Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39) Rhamnose containing glycans
fig|6666666.148659.peg.2003 CDS NC_002950.2 2164938 2165669 3 + 732 oxidoreductase, short chain dehydrogenase/reductase family - none -
fig|6666666.148659.peg.2004 CDS NC_002950.2 2165681 2166607 2 + 927 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.148659.peg.2005 CDS NC_002950.2 2166652 2167512 1 + 861 Putative hemolysin - none -
fig|6666666.148659.peg.2006 CDS NC_002950.2 2167509 2170817 3 + 3309 UvrD/REP helicase domain protein - none -
fig|6666666.148659.peg.2007 CDS NC_002950.2 2174510 2174367 -2 - 144 hypothetical protein - none -
fig|6666666.148659.peg.2008 CDS NC_002950.2 2174721 2174593 -3 - 129 hypothetical protein - none -
fig|6666666.148659.peg.2009 CDS NC_002950.2 2176394 2176507 2 + 114 hypothetical protein - none -
fig|6666666.148659.peg.2010 CDS NC_002950.2 2176672 2177133 1 + 462 hypothetical protein - none -
fig|6666666.148659.peg.2011 CDS NC_002950.2 2177451 2177095 -3 - 357 FIG00936319: hypothetical protein - none -
fig|6666666.148659.peg.2012 CDS NC_002950.2 2178549 2177518 -3 - 1032 FIG00935838: hypothetical protein - none -
fig|6666666.148659.peg.2013 CDS NC_002950.2 2179456 2178980 -1 - 477 FIG00935874: hypothetical protein - none -
fig|6666666.148659.peg.2014 CDS NC_002950.2 2180769 2179468 -3 - 1302 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148659.peg.2015 CDS NC_002950.2 2181817 2180759 -1 - 1059 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.148659.peg.2016 CDS NC_002950.2 2183474 2181933 -2 - 1542 Di/tripeptide permease DtpT Proton-dependent Peptide Transporters
fig|6666666.148659.peg.2017 CDS NC_002950.2 2184591 2183500 -3 - 1092 FIG00936535: hypothetical protein - none -
fig|6666666.148659.peg.2018 CDS NC_002950.2 2185716 2185603 -3 - 114 hypothetical protein - none -
fig|6666666.148659.peg.2019 CDS NC_002950.2 2185672 2186655 1 + 984 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.148659.peg.2020 CDS NC_002950.2 2186711 2187130 2 + 420 hypothetical protein - none -
fig|6666666.148659.peg.2021 CDS NC_002950.2 2187130 2187603 1 + 474 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.148659.peg.2022 CDS NC_002950.2 2187665 2188723 2 + 1059 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase
fig|6666666.148659.peg.2023 CDS NC_002950.2 2188780 2189964 1 + 1185 FIG00406664: hypothetical protein - none -
fig|6666666.148659.peg.2024 CDS NC_002950.2 2190370 2191278 1 + 909 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.148659.peg.2025 CDS NC_002950.2 2191317 2191670 3 + 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.148659.peg.2026 CDS NC_002950.2 2193000 2191741 -3 - 1260 FIG00935540: hypothetical protein - none -
fig|6666666.148659.peg.2027 CDS NC_002950.2 2193136 2193330 1 + 195 hypothetical protein - none -
fig|6666666.148659.peg.2028 CDS NC_002950.2 2197868 2193411 -2 - 4458 FIG00935920: hypothetical protein - none -
fig|6666666.148659.peg.2029 CDS NC_002950.2 2200707 2198380 -3 - 2328 FIG00935923: hypothetical protein - none -
fig|6666666.148659.peg.2030 CDS NC_002950.2 2205505 2200715 -1 - 4791 FIG00935594: hypothetical protein - none -
fig|6666666.148659.peg.2031 CDS NC_002950.2 2206552 2205611 -1 - 942 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway
fig|6666666.148659.peg.2032 CDS NC_002950.2 2206725 2206549 -3 - 177 FIG00935630: hypothetical protein - none -
fig|6666666.148659.peg.2033 CDS NC_002950.2 2208022 2206739 -1 - 1284 ATP-dependent RNA helicase - none -
fig|6666666.148659.peg.2034 CDS NC_002950.2 2208287 2208448 2 + 162 hypothetical protein - none -
fig|6666666.148659.peg.2035 CDS NC_002950.2 2210269 2208617 -1 - 1653 FIG00936385: hypothetical protein - none -
fig|6666666.148659.peg.2036 CDS NC_002950.2 2211342 2210368 -3 - 975 FIG00935807: hypothetical protein - none -
fig|6666666.148659.peg.2037 CDS NC_002950.2 2213136 2211514 -3 - 1623 FIG00936385: hypothetical protein - none -
fig|6666666.148659.peg.2038 CDS NC_002950.2 2213450 2213316 -2 - 135 hypothetical protein - none -
fig|6666666.148659.peg.2039 CDS NC_002950.2 2213709 2213575 -3 - 135 hypothetical protein - none -
fig|6666666.148659.peg.2040 CDS NC_002950.2 2213965 2214639 1 + 675 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148659.peg.2041 CDS NC_002950.2 2214840 2215517 3 + 678 FIG00935760: hypothetical protein - none -
fig|6666666.148659.peg.2042 CDS NC_002950.2 2216748 2215636 -3 - 1113 Thiazole biosynthesis protein ThiH Thiamin biosynthesis
fig|6666666.148659.peg.2043 CDS NC_002950.2 2217540 2216761 -3 - 780 Thiazole biosynthesis protein ThiG Thiamin biosynthesis
fig|6666666.148659.peg.2044 CDS NC_002950.2 2219542 2217599 -1 - 1944 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.148659.peg.2045 CDS NC_002950.2 2221302 2219539 -3 - 1764 Thiamin biosynthesis protein ThiC Thiamin biosynthesis
fig|6666666.148659.peg.2046 CDS NC_002950.2 2221572 2221372 -3 - 201 Sulfur carrier protein ThiS Thiamin biosynthesis
fig|6666666.148659.peg.2047 CDS NC_002950.2 2221880 2221725 -2 - 156 hypothetical protein - none -
fig|6666666.148659.peg.2048 CDS NC_002950.2 2221944 2222723 3 + 780 FIG00935635: hypothetical protein - none -
fig|6666666.148659.peg.2049 CDS NC_002950.2 2222973 2223965 3 + 993 hypothetical protein - none -
fig|6666666.148659.peg.2050 CDS NC_002950.2 2223962 2224096 2 + 135 hypothetical protein - none -
fig|6666666.148659.peg.2051 CDS NC_002950.2 2224242 2224072 -3 - 171 hypothetical protein - none -
fig|6666666.148659.peg.2052 CDS NC_002950.2 2224799 2224927 2 + 129 hypothetical protein - none -
fig|6666666.148659.peg.2053 CDS NC_002950.2 2225885 2225325 -2 - 561 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.148659.peg.2054 CDS NC_002950.2 2226167 2226313 2 + 147 hypothetical protein - none -
fig|6666666.148659.peg.2055 CDS NC_002950.2 2226687 2227658 3 + 972 oxidoreductase, Gfo/Idh/MocA family - none -
fig|6666666.148659.peg.2056 CDS NC_002950.2 2228582 2227773 -2 - 810 metallo-beta-lactamase family protein - none -
fig|6666666.148659.peg.2057 CDS NC_002950.2 2229648 2228635 -3 - 1014 L-asparaginase I, cytoplasmic (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.148659.peg.2058 CDS NC_002950.2 2230013 2229726 -2 - 288 Mobile element protein - none -
fig|6666666.148659.peg.2059 CDS NC_002950.2 2230106 2230303 2 + 198 hypothetical protein - none -
fig|6666666.148659.peg.2060 CDS NC_002950.2 2230314 2231324 3 + 1011 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.148659.peg.2061 CDS NC_002950.2 2232344 2231466 -2 - 879 transcriptional regulator, AraC family - none -
fig|6666666.148659.peg.2062 CDS NC_002950.2 2233202 2232528 -2 - 675 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC - none -
fig|6666666.148659.peg.2063 CDS NC_002950.2 2233642 2233199 -1 - 444 hypothetical protein - none -
fig|6666666.148659.peg.2064 CDS NC_002950.2 2234745 2233957 -3 - 789 Mobile element protein - none -
fig|6666666.148659.peg.2065 CDS NC_002950.2 2235146 2234949 -2 - 198 ISPg5, transposase Orf1 - none -
fig|6666666.148659.peg.2066 CDS NC_002950.2 2235300 2235431 3 + 132 Mobile element protein - none -
fig|6666666.148659.peg.2067 CDS NC_002950.2 2235725 2236288 2 + 564 FIG00936405: hypothetical protein - none -
fig|6666666.148659.peg.2068 CDS NC_002950.2 2236314 2237786 3 + 1473 60 kDa protein - none -
fig|6666666.148659.peg.2069 CDS NC_002950.2 2237837 2239003 2 + 1167 similar to GB:M15518, GB:D01096, GB:A01465, GB:A04051, GB:A07197, GB:V00570, GB:K03021, GB:L00153, GB:L00141, GB:L00142, GB:L00143, GB:L00144, GB:L00145, GB:L00146, GB:L00147, GB:L00148, GB:L00149, GB:L00150, GB:L00151, GB:L00152, GB:S77144, SP:P00750, PID:190032, PID:2285954, PID:339818, PID:339834, PID:339839, PID:340177, PID:345129, PID:37244, PID:412165, PID:441174, and PID:575655; identified by sequence similarity; putative - none -
fig|6666666.148659.peg.2070 CDS NC_002950.2 2239142 2240053 2 + 912 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.148659.peg.2071 CDS NC_002950.2 2240136 2241440 3 + 1305 lipoprotein, putative - none -
fig|6666666.148659.peg.2072 CDS NC_002950.2 2241461 2243473 2 + 2013 FIG00935539: hypothetical protein - none -
fig|6666666.148659.peg.2073 CDS NC_002950.2 2243500 2245164 1 + 1665 FIG00936358: hypothetical protein - none -
fig|6666666.148659.peg.2074 CDS NC_002950.2 2245750 2245595 -1 - 156 hypothetical protein - none -
fig|6666666.148659.peg.2075 CDS NC_002950.2 2245842 2246267 3 + 426 COG1399 protein in cluster with ribosomal protein L32p, Bacteroidetes/Chlorobi subfamily - none -
fig|6666666.148659.peg.2076 CDS NC_002950.2 2246343 2246459 3 + 117 LSU ribosomal protein L32p - none -
fig|6666666.148659.peg.2077 CDS NC_002950.2 2246620 2246417 -1 - 204 hypothetical protein - none -
fig|6666666.148659.peg.2078 CDS NC_002950.2 2246639 2247646 2 + 1008 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.148659.peg.2079 CDS NC_002950.2 2247725 2248624 2 + 900 GTP-binding protein Era Bacterial Cell Division;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.148659.peg.2080 CDS NC_002950.2 2248687 2250000 1 + 1314 GTP-binding protein EngA Universal GTPases
fig|6666666.148659.peg.2081 CDS NC_002950.2 2250051 2253350 3 + 3300 membrane protein, putative - none -
fig|6666666.148659.peg.2082 CDS NC_002950.2 2253351 2253998 3 + 648 Polysaccharide deacetylase - none -
fig|6666666.148659.peg.2083 CDS NC_002950.2 2254024 2254710 1 + 687 putative peptidase - none -
fig|6666666.148659.peg.2084 CDS NC_002950.2 2255490 2254909 -3 - 582 Xanthine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions;
Xanthine Metabolism in Bacteria
fig|6666666.148659.peg.2085 CDS NC_002950.2 2256864 2255527 -3 - 1338 Xanthine permease Purine Utilization;
Xanthine Metabolism in Bacteria
fig|6666666.148659.peg.2086 CDS NC_002950.2 2257697 2257026 -2 - 672 FIG00935770: hypothetical protein - none -
fig|6666666.148659.peg.2087 CDS NC_002950.2 2259262 2257757 -1 - 1506 FIG00936147: hypothetical protein - none -
fig|6666666.148659.peg.2088 CDS NC_002950.2 2259890 2260375 2 + 486 DNA-binding protein, histone-like family - none -
fig|6666666.148659.peg.2089 CDS NC_002950.2 2261035 2260850 -1 - 186 FIG00935778: hypothetical protein - none -
fig|6666666.148659.peg.2090 CDS NC_002950.2 2261952 2261062 -3 - 891 FIG00936165: hypothetical protein - none -
fig|6666666.148659.peg.2091 CDS NC_002950.2 2262735 2261989 -3 - 747 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.148659.peg.2092 CDS NC_002950.2 2263083 2264084 3 + 1002 leucine aminopeptidase precursor - none -
fig|6666666.148659.peg.2093 CDS NC_002950.2 2264108 2264533 2 + 426 Sulfur acceptor protein SufE for iron-sulfur cluster assembly Iron-sulfur cluster assembly
fig|6666666.148659.peg.2094 CDS NC_002950.2 2264537 2265934 2 + 1398 Protoporphyrinogen IX oxidase, aerobic, HemY (EC 1.3.3.4) Heme and Siroheme Biosynthesis
fig|6666666.148659.peg.2095 CDS NC_002950.2 2266648 2266517 -1 - 132 transposase in ISPg1 - none -
fig|6666666.148659.peg.2096 CDS NC_002950.2 2267706 2266807 -3 - 900 Transcriptional regulator, AraC family - none -
fig|6666666.148659.peg.2097 CDS NC_002950.2 2268854 2267703 -2 - 1152 Lipid-A-disaccharide synthase (EC 2.4.1.182) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.148659.peg.2098 CDS NC_002950.2 2269661 2268891 -2 - 771 5-nucleotidase SurE (EC 3.1.3.5) Housecleaning nucleoside triphosphate pyrophosphatases;
Stationary phase repair cluster
fig|6666666.148659.peg.2099 CDS NC_002950.2 2270215 2269658 -1 - 558 peptidyl-prolyl cis-trans isomerase, FKBP-type - none -
fig|6666666.148659.peg.2100 CDS NC_002950.2 2271759 2270212 -3 - 1548 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.148659.peg.2101 CDS NC_002950.2 2273663 2272194 -2 - 1470 FIG00935587: hypothetical protein - none -
fig|6666666.148659.peg.2102 CDS NC_002950.2 2274127 2273678 -1 - 450 hypothetical protein - none -
fig|6666666.148659.peg.2103 CDS NC_002950.2 2274662 2274886 2 + 225 Mobile element protein - none -
fig|6666666.148659.peg.2104 CDS NC_002950.2 2275081 2275263 1 + 183 Mobile element protein - none -
fig|6666666.148659.peg.2105 CDS NC_002950.2 2275209 2275988 3 + 780 Mobile element protein - none -
fig|6666666.148659.peg.2106 CDS NC_002950.2 2276501 2276232 -2 - 270 DNA-binding protein, histone-like family - none -
fig|6666666.148659.peg.2107 CDS NC_002950.2 2278064 2276775 -2 - 1290 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.148659.peg.2108 CDS NC_002950.2 2279062 2278103 -1 - 960 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.148659.peg.2109 CDS NC_002950.2 2280027 2279281 -3 - 747 FIG00936543: hypothetical protein - none -
fig|6666666.148659.peg.2110 CDS NC_002950.2 2280903 2280031 -3 - 873 outer membrane lipoprotein Omp28 - none -
fig|6666666.148659.peg.2111 CDS NC_002950.2 2282668 2280923 -1 - 1746 FIG00936390: hypothetical protein - none -
fig|6666666.148659.peg.2112 CDS NC_002950.2 2283206 2282724 -2 - 483 FIG00936159: hypothetical protein - none -
fig|6666666.148659.peg.2113 CDS NC_002950.2 2284435 2283305 -1 - 1131 Mobile element protein - none -
fig|6666666.148659.peg.2114 CDS NC_002950.2 2286594 2285356 -3 - 1239 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148659.peg.2115 CDS NC_002950.2 2287227 2286613 -3 - 615 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148659.peg.2116 CDS NC_002950.2 2287896 2287267 -3 - 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148659.peg.2117 CDS NC_002950.2 2288636 2287902 -2 - 735 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148659.peg.2118 CDS NC_002950.2 2289688 2288660 -1 - 1029 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148659.peg.2119 CDS NC_002950.2 2289719 2289850 2 + 132 hypothetical protein - none -
fig|6666666.148659.peg.2120 CDS NC_002950.2 2291245 2289890 -1 - 1356 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.148659.peg.2121 CDS NC_002950.2 2291560 2291736 1 + 177 hypothetical protein - none -
fig|6666666.148659.peg.2122 CDS NC_002950.2 2293339 2292023 -1 - 1317 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.148659.peg.2123 CDS NC_002950.2 2293754 2293374 -2 - 381 Transcriptional regulator, MecI family - none -
fig|6666666.148659.peg.2124 CDS NC_002950.2 2294688 2293846 -3 - 843 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.148659.peg.2125 CDS NC_002950.2 2295871 2294723 -1 - 1149 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.148659.peg.2126 CDS NC_002950.2 2297241 2295901 -3 - 1341 Aspartokinase (EC 2.7.2.4) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.148659.peg.2127 CDS NC_002950.2 2297999 2297259 -2 - 741 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.148659.peg.2128 CDS NC_002950.2 2298532 2298362 -1 - 171 hypothetical protein - none -
fig|6666666.148659.peg.2129 CDS NC_002950.2 2298540 2299394 3 + 855 Peptidase, M23/M37 family - none -
fig|6666666.148659.peg.2130 CDS NC_002950.2 2299686 2299555 -3 - 132 Calcium-transporting ATPase - none -
fig|6666666.148659.peg.2131 CDS NC_002950.2 2300421 2299711 -3 - 711 Mobile element protein - none -
fig|6666666.148659.peg.2132 CDS NC_002950.2 2300792 2300436 -2 - 357 Mobile element protein - none -
fig|6666666.148659.peg.2133 CDS NC_002950.2 2302209 2301052 -3 - 1158 Mobile element protein - none -
fig|6666666.148659.peg.2134 CDS NC_002950.2 2302468 2302334 -1 - 135 Mobile element protein - none -
fig|6666666.148659.peg.2135 CDS NC_002950.2 2302745 2303542 2 + 798 Zn-dependent protease with chaperone function PA4632 - none -
fig|6666666.148659.peg.2136 CDS NC_002950.2 2303753 2304634 2 + 882 FIG00936452: hypothetical protein - none -
fig|6666666.148659.peg.2137 CDS NC_002950.2 2306813 2304876 -2 - 1938 ABC transporter ATP-binding protein - none -
fig|6666666.148659.peg.2138 CDS NC_002950.2 2308897 2306810 -1 - 2088 TPR repeat precursor - none -
fig|6666666.148659.peg.2139 CDS NC_002950.2 2309502 2308933 -3 - 570 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.148659.peg.2140 CDS NC_002950.2 2310251 2309607 -2 - 645 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.148659.peg.2141 CDS NC_002950.2 2310316 2310450 1 + 135 hypothetical protein - none -
fig|6666666.148659.peg.2142 CDS NC_002950.2 2310521 2316247 2 + 5727 FIG00936309: hypothetical protein - none -
fig|6666666.148659.peg.2143 CDS NC_002950.2 2316261 2317205 3 + 945 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.148659.peg.2144 CDS NC_002950.2 2318956 2317340 -1 - 1617 ABC transporter, ATP-binding protein - none -
fig|6666666.148659.peg.2145 CDS NC_002950.2 2320251 2319232 -3 - 1020 FIG00936097: hypothetical protein - none -
fig|6666666.148659.peg.2146 CDS NC_002950.2 2320586 2320422 -2 - 165 Integral membrane protein - none -
fig|6666666.148659.peg.2147 CDS NC_002950.2 2321018 2320764 -2 - 255 Transglycosylase-associated protein - none -
fig|6666666.148659.peg.2148 CDS NC_002950.2 2323900 2321042 -1 - 2859 Excinuclease ABC subunit A paralog in greater Bacteroides group DNA repair, UvrABC system
fig|6666666.148659.peg.2149 CDS NC_002950.2 2325120 2324938 -3 - 183 nitrite reductase-related protein - none -
fig|6666666.148659.peg.2150 CDS NC_002950.2 2326665 2325391 -3 - 1275 FIG00936138: hypothetical protein - none -
fig|6666666.148659.peg.2151 CDS NC_002950.2 2327785 2326700 -1 - 1086 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) Mannose Metabolism
fig|6666666.148659.peg.2152 CDS NC_002950.2 2328373 2329590 1 + 1218 FIG00936576: hypothetical protein - none -
fig|6666666.148659.peg.2153 CDS NC_002950.2 2329781 2329587 -2 - 195 hypothetical protein - none -
fig|6666666.148659.peg.2154 CDS NC_002950.2 2329763 2331667 2 + 1905 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.148659.peg.2155 CDS NC_002950.2 2331720 2333060 3 + 1341 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.148659.peg.2156 CDS NC_002950.2 2333087 2334550 2 + 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.148659.peg.2157 CDS NC_002950.2 2335141 2335428 1 + 288 Mobile element protein - none -
fig|6666666.148659.peg.2158 CDS NC_002950.2 2335557 2336900 3 + 1344 tRNA-t(6)A37 methylthiotransferase Heat shock dnaK gene cluster extended;
Methylthiotransferases
fig|6666666.148659.peg.2159 CDS NC_002950.2 2336897 2337814 2 + 918 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.148659.peg.2160 CDS NC_002950.2 2337811 2338821 1 + 1011 Glycosyltransferase - none -
fig|6666666.148659.peg.2161 CDS NC_002950.2 2338964 2339560 2 + 597 FIG00936093: hypothetical protein - none -
fig|6666666.148659.peg.2162 CDS NC_002950.2 2339595 2339849 3 + 255 FIG00935478: hypothetical protein - none -
fig|6666666.148659.peg.2163 CDS NC_002950.2 2339929 2342151 1 + 2223 FIG00935975: hypothetical protein - none -
fig|6666666.148659.peg.2164 CDS NC_002950.2 2342148 2342804 3 + 657 FIG00935981: hypothetical protein - none -
fig|6666666.148659.rna.1 RNA NC_002950.2 6677 6604 -2 - 74 tRNA-Asn-GTT - none -
fig|6666666.148659.rna.2 RNA NC_002950.2 6773 6700 -2 - 74 tRNA-Asn-GTT - none -
fig|6666666.148659.rna.3 RNA NC_002950.2 35651 35721 2 + 71 tRNA-Gln-TTG - none -
fig|6666666.148659.rna.4 RNA NC_002950.2 119556 121030 3 + 1475 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.148659.rna.5 RNA NC_002950.2 121595 121668 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.148659.rna.6 RNA NC_002950.2 121670 121743 2 + 74 tRNA-Ala-TGC - none -
fig|6666666.148659.rna.7 RNA NC_002950.2 121861 124700 1 + 2840 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.148659.rna.8 RNA NC_002950.2 124844 124954 2 + 111 5S RNA - none -
fig|6666666.148659.rna.9 RNA NC_002950.2 420529 420611 1 + 83 tRNA-Tyr-GTA - none -
fig|6666666.148659.rna.10 RNA NC_002950.2 420644 420715 2 + 72 tRNA-Thr-GGT - none -
fig|6666666.148659.rna.11 RNA NC_002950.2 422041 422113 1 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.148659.rna.12 RNA NC_002950.2 563323 563237 -1 - 87 tRNA-Pseudo-GCT - none -
fig|6666666.148659.rna.13 RNA NC_002950.2 582556 582638 1 + 83 tRNA-Tyr-GTA - none -
fig|6666666.148659.rna.14 RNA NC_002950.2 582672 582744 3 + 73 tRNA-Gly-TCC - none -
fig|6666666.148659.rna.15 RNA NC_002950.2 582761 582845 2 + 85 tRNA-Leu-TAA - none -
fig|6666666.148659.rna.16 RNA NC_002950.2 582894 582966 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.148659.rna.17 RNA NC_002950.2 703822 703739 -1 - 84 tRNA-Leu-CAA tRNAs
fig|6666666.148659.rna.18 RNA NC_002950.2 795975 795902 -3 - 74 tRNA-Arg-CCG tRNAs
fig|6666666.148659.rna.19 RNA NC_002950.2 827300 827374 2 + 75 tRNA-Pro-TGG - none -
fig|6666666.148659.rna.20 RNA NC_002950.2 834775 834688 -1 - 88 tRNA-Ser-GGA tRNAs
fig|6666666.148659.rna.21 RNA NC_002950.2 854743 854671 -1 - 73 tRNA-Gly-CCC tRNAs
fig|6666666.148659.rna.22 RNA NC_002950.2 905651 905567 -2 - 85 tRNA-Ser-TGA - none -
fig|6666666.148659.rna.23 RNA NC_002950.2 957036 957109 3 + 74 tRNA-Met-CAT - none -
fig|6666666.148659.rna.24 RNA NC_002950.2 977736 977663 -3 - 74 tRNA-Ala-GGC tRNAs
fig|6666666.148659.rna.25 RNA NC_002950.2 1028024 1028105 2 + 82 tRNA-Leu-TAG - none -
fig|6666666.148659.rna.26 RNA NC_002950.2 1043983 1044055 1 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.148659.rna.27 RNA NC_002950.2 1115027 1115100 2 + 74 tRNA-Thr-TGT - none -
fig|6666666.148659.rna.28 RNA NC_002950.2 1167230 1167157 -2 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.148659.rna.29 RNA NC_002950.2 1167339 1167266 -3 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.148659.rna.30 RNA NC_002950.2 1214224 1214296 1 + 73 tRNA-Thr-CGT - none -
fig|6666666.148659.rna.31 RNA NC_002950.2 1315476 1315406 -3 - 71 tRNA-Gln-CTG - none -
fig|6666666.148659.rna.32 RNA NC_002950.2 1325681 1325755 2 + 75 tRNA-Pro-GGG tRNAs
fig|6666666.148659.rna.33 RNA NC_002950.2 1341571 1341461 -1 - 111 5S RNA - none -
fig|6666666.148659.rna.34 RNA NC_002950.2 1344554 1341715 -2 - 2840 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.148659.rna.35 RNA NC_002950.2 1344745 1344672 -1 - 74 tRNA-Ala-TGC - none -
fig|6666666.148659.rna.36 RNA NC_002950.2 1344820 1344747 -1 - 74 tRNA-Ile-GAT - none -
fig|6666666.148659.rna.37 RNA NC_002950.2 1346859 1345385 -3 - 1475 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.148659.rna.38 RNA NC_002950.2 1394153 1394224 2 + 72 tRNA-Arg-CCT - none -
fig|6666666.148659.rna.39 RNA NC_002950.2 1520059 1520132 1 + 74 tRNA-Asp-GTC - none -
fig|6666666.148659.rna.40 RNA NC_002950.2 1624760 1624833 2 + 74 tRNA-Arg-TCT - none -
fig|6666666.148659.rna.41 RNA NC_002950.2 1669233 1669304 3 + 72 tRNA-His-GTG - none -
fig|6666666.148659.rna.42 RNA NC_002950.2 1752242 1752132 -2 - 111 5S RNA - none -
fig|6666666.148659.rna.43 RNA NC_002950.2 1755225 1752386 -3 - 2840 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.148659.rna.44 RNA NC_002950.2 1755416 1755343 -2 - 74 tRNA-Ala-TGC - none -
fig|6666666.148659.rna.45 RNA NC_002950.2 1755491 1755418 -2 - 74 tRNA-Ile-GAT - none -
fig|6666666.148659.rna.46 RNA NC_002950.2 1757530 1756056 -1 - 1475 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.148659.rna.47 RNA NC_002950.2 1813108 1813179 1 + 72 tRNA-Glu-TTC - none -
fig|6666666.148659.rna.48 RNA NC_002950.2 1813528 1813599 1 + 72 tRNA-Glu-TTC - none -
fig|6666666.148659.rna.49 RNA NC_002950.2 1874227 1874301 1 + 75 tRNA-Val-TAC - none -
fig|6666666.148659.rna.50 RNA NC_002950.2 1874344 1874418 1 + 75 tRNA-Val-TAC - none -
fig|6666666.148659.rna.51 RNA NC_002950.2 1917252 1917180 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.148659.rna.52 RNA NC_002950.2 2118926 2118853 -2 - 74 tRNA-Asp-GTC - none -
fig|6666666.148659.rna.53 RNA NC_002950.2 2154390 2154318 -3 - 73 tRNA-Lys-CTT - none -
fig|6666666.148659.rna.54 RNA NC_002950.2 2171050 2170940 -1 - 111 5S RNA - none -
fig|6666666.148659.rna.55 RNA NC_002950.2 2174033 2171194 -2 - 2840 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.148659.rna.56 RNA NC_002950.2 2174224 2174151 -1 - 74 tRNA-Ala-TGC - none -
fig|6666666.148659.rna.57 RNA NC_002950.2 2174299 2174226 -1 - 74 tRNA-Ile-GAT - none -
fig|6666666.148659.rna.58 RNA NC_002950.2 2176338 2174864 -3 - 1475 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.148659.rna.59 RNA NC_002950.2 2213783 2213856 2 + 74 tRNA-Met-CAT - none -
fig|6666666.148659.rna.60 RNA NC_002950.2 2260655 2260727 2 + 73 tRNA-Pro-CGG tRNAs
fig|6666666.148659.rna.61 RNA NC_002950.2 2284950 2285021 3 + 72 tRNA-Met-CAT - none -
fig|6666666.148659.rna.62 RNA NC_002950.2 2324108 2324025 -2 - 84 tRNA-Leu-GAG tRNAs
fig|6666666.148659.rna.63 RNA NC_002950.2 2324224 2324142 -1 - 83 tRNA-Leu-CAG tRNAs
fig|6666666.148659.rna.64 RNA NC_002950.2 2324387 2324315 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.148659.rna.65 RNA NC_002950.2 2334812 2334742 -2 - 71 tRNA-Cys-GCA tRNAs