fig|6666666.229868.peg.1 CDS CM001794.1 1465 482 -1 - 984 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229868.peg.2 CDS CM001794.1 1602 2249 3 + 648 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229868.peg.3 CDS CM001794.1 2368 2727 1 + 360 Phage-related protein - none -
fig|6666666.229868.peg.4 CDS CM001794.1 2720 3001 2 + 282 hypothetical protein - none -
fig|6666666.229868.peg.5 CDS CM001794.1 3516 3046 -3 - 471 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229868.peg.6 CDS CM001794.1 5011 3506 -1 - 1506 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229868.peg.7 CDS CM001794.1 5202 6131 3 + 930 ChlI component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.229868.peg.8 CDS CM001794.1 6118 8049 1 + 1932 ChlI component of cobalt chelatase involved in B12 biosynthesis / ChlD component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.229868.peg.9 CDS CM001794.1 8046 11780 3 + 3735 CobN component of cobalt chelatase involved in B12 biosynthesis - none -
fig|6666666.229868.peg.10 CDS CM001794.1 11964 13121 3 + 1158 Vitamin B12 ABC transporter, B12-binding component BtuF - none -
fig|6666666.229868.peg.11 CDS CM001794.1 13125 14156 3 + 1032 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229868.peg.12 CDS CM001794.1 14143 15321 1 + 1179 Vitamin B12 ABC transporter, ATPase component BtuD - none -
fig|6666666.229868.peg.14 CDS CM001794.1 15916 15443 -1 - 474 Glycine/sarcosine/betaine reductase protein A @ selenocysteine-containing Glycine reductase, sarcosine reductase and betaine reductase
fig|6666666.229868.peg.16 CDS CM001794.1 16360 16043 -1 - 318 Thioredoxin Glycine reductase, sarcosine reductase and betaine reductase
fig|6666666.229868.peg.17 CDS CM001794.1 17493 16540 -3 - 954 Thioredoxin reductase (EC 1.8.1.9) Glycine reductase, sarcosine reductase and betaine reductase;
Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229868.peg.18 CDS CM001794.1 17685 19001 3 + 1317 hypothetical protein - none -
fig|6666666.229868.peg.19 CDS CM001794.1 19021 20343 1 + 1323 hypothetical protein - none -
fig|6666666.229868.peg.20 CDS CM001794.1 20404 21060 1 + 657 hypothetical protein - none -
fig|6666666.229868.peg.21 CDS CM001794.1 21256 22557 1 + 1302 hypothetical protein - none -
fig|6666666.229868.peg.22 CDS CM001794.1 22630 23646 1 + 1017 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229868.peg.23 CDS CM001794.1 24497 23652 -2 - 846 Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4) Purine Utilization
fig|6666666.229868.peg.24 CDS CM001794.1 24982 24503 -1 - 480 Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4) Purine Utilization
fig|6666666.229868.peg.25 CDS CM001794.1 27059 24972 -2 - 2088 FIG01187527: hypothetical protein - none -
fig|6666666.229868.peg.26 CDS CM001794.1 28238 27063 -2 - 1176 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) - none -
fig|6666666.229868.peg.27 CDS CM001794.1 29833 28523 -1 - 1311 Peptidase, S41 family - none -
fig|6666666.229868.peg.28 CDS CM001794.1 31387 30155 -1 - 1233 Peptidase, S41 family - none -
fig|6666666.229868.peg.29 CDS CM001794.1 31596 31450 -3 - 147 hypothetical protein - none -
fig|6666666.229868.peg.30 CDS CM001794.1 33170 31908 -2 - 1263 Peptidase, S41 family - none -
fig|6666666.229868.peg.31 CDS CM001794.1 35011 33680 -1 - 1332 Peptidase, S41 family - none -
fig|6666666.229868.peg.32 CDS CM001794.1 36505 35018 -1 - 1488 capsular polysaccharide biosynthesis protein Rhamnose containing glycans
fig|6666666.229868.peg.33 CDS CM001794.1 37029 36502 -3 - 528 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229868.peg.34 CDS CM001794.1 37237 38007 1 + 771 membrane protein, putative - none -
fig|6666666.229868.peg.35 CDS CM001794.1 38007 38462 3 + 456 membrane protein, putative - none -
fig|6666666.229868.peg.36 CDS CM001794.1 38527 39591 1 + 1065 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase
fig|6666666.229868.peg.37 CDS CM001794.1 40122 39607 -3 - 516 nitroreductase family protein - none -
fig|6666666.229868.peg.38 CDS CM001794.1 42472 40160 -1 - 2313 Permease of the major facilitator superfamily - none -
fig|6666666.229868.peg.39 CDS CM001794.1 43600 42488 -1 - 1113 DNA modification methylase (Adenine-specific methyltransferase) (EC 2.1.1.72) - none -
fig|6666666.229868.peg.40 CDS CM001794.1 43800 44729 3 + 930 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229868.peg.41 CDS CM001794.1 44722 45639 1 + 918 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229868.peg.42 CDS CM001794.1 45879 46103 3 + 225 transcriptional regulator, AbrB family - none -
fig|6666666.229868.peg.43 CDS CM001794.1 46100 46825 2 + 726 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.44 CDS CM001794.1 46822 47571 1 + 750 ABC transporter, permease protein, putative - none -
fig|6666666.229868.peg.45 CDS CM001794.1 47670 48737 3 + 1068 hypothetical protein - none -
fig|6666666.229868.peg.46 CDS CM001794.1 48816 49049 3 + 234 hypothetical protein - none -
fig|6666666.229868.peg.47 CDS CM001794.1 49033 49446 1 + 414 PIN domain protein - none -
fig|6666666.229868.peg.48 CDS CM001794.1 49696 49848 1 + 153 hypothetical protein - none -
fig|6666666.229868.peg.49 CDS CM001794.1 51054 49888 -3 - 1167 membrane protein, putative - none -
fig|6666666.229868.peg.50 CDS CM001794.1 52096 51041 -1 - 1056 membrane protein, putative - none -
fig|6666666.229868.peg.51 CDS CM001794.1 53028 52096 -3 - 933 ABC-type multidrug transport system, ATPase component - none -
fig|6666666.229868.peg.52 CDS CM001794.1 54075 53266 -3 - 810 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229868.peg.53 CDS CM001794.1 55736 54150 -2 - 1587 Methionine ABC transporter ATP-binding protein Methionine Degradation
fig|6666666.229868.peg.54 CDS CM001794.1 56889 55789 -3 - 1101 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229868.peg.55 CDS CM001794.1 58097 56895 -2 - 1203 5-methylthioribose kinase (EC 2.7.1.100) - none -
fig|6666666.229868.peg.56 CDS CM001794.1 59615 58110 -2 - 1506 hypothetical protein - none -
fig|6666666.229868.peg.57 CDS CM001794.1 60113 59634 -2 - 480 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.229868.peg.58 CDS CM001794.1 61060 60110 -1 - 951 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.229868.peg.59 CDS CM001794.1 61217 62014 2 + 798 oxidoreductase, short chain dehydrogenase/reductase family - none -
fig|6666666.229868.peg.60 CDS CM001794.1 62490 62095 -3 - 396 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229868.peg.61 CDS CM001794.1 62534 62650 2 + 117 hypothetical protein - none -
fig|6666666.229868.peg.62 CDS CM001794.1 62760 63173 3 + 414 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229868.peg.63 CDS CM001794.1 63219 64982 3 + 1764 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229868.peg.64 CDS CM001794.1 64984 66225 1 + 1242 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229868.peg.65 CDS CM001794.1 67443 66295 -3 - 1149 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229868.peg.66 CDS CM001794.1 67783 67430 -1 - 354 hypothetical protein - none -
fig|6666666.229868.peg.67 CDS CM001794.1 68417 67824 -2 - 594 Hypothetical protein Cj1505c - none -
fig|6666666.229868.peg.68 CDS CM001794.1 68935 68516 -1 - 420 Rrf2 family transcriptional regulator, group III Rrf2 family transcriptional regulators
fig|6666666.229868.peg.69 CDS CM001794.1 69801 68944 -3 - 858 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.229868.peg.70 CDS CM001794.1 70634 69798 -2 - 837 COG2110, Macro domain, possibly ADP-ribose binding module - none -
fig|6666666.229868.peg.71 CDS CM001794.1 71128 70631 -1 - 498 hypothetical protein - none -
fig|6666666.229868.peg.72 CDS CM001794.1 71827 71198 -1 - 630 Rrf2-linked NADH-flavin reductase - none -
fig|6666666.229868.peg.73 CDS CM001794.1 73003 71954 -1 - 1050 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229868.peg.74 CDS CM001794.1 73486 73082 -1 - 405 Phage-related protein - none -
fig|6666666.229868.peg.75 CDS CM001794.1 73690 73508 -1 - 183 hypothetical protein - none -
fig|6666666.229868.peg.76 CDS CM001794.1 75029 74049 -2 - 981 Expressed protein - none -
fig|6666666.229868.peg.77 CDS CM001794.1 76595 75039 -2 - 1557 FIG137478: Hypothetical protein tRNA modification Bacteria
fig|6666666.229868.peg.78 CDS CM001794.1 78622 76730 -1 - 1893 hypothetical protein - none -
fig|6666666.229868.peg.79 CDS CM001794.1 79090 78626 -1 - 465 hypothetical protein - none -
fig|6666666.229868.peg.80 CDS CM001794.1 81586 79211 -1 - 2376 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229868.peg.81 CDS CM001794.1 81632 81787 2 + 156 Transposase - none -
fig|6666666.229868.peg.82 CDS CM001794.1 83016 81853 -3 - 1164 Iron-sulfur cluster assembly protein SufD tRNA modification Bacteria
fig|6666666.229868.peg.83 CDS CM001794.1 84485 83019 -2 - 1467 Iron-sulfur cluster assembly protein SufB tRNA modification Bacteria
fig|6666666.229868.peg.84 CDS CM001794.1 85225 84482 -1 - 744 Iron-sulfur cluster assembly ATPase protein SufC tRNA modification Bacteria
fig|6666666.229868.peg.85 CDS CM001794.1 85473 89033 3 + 3561 Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) Methionine Degradation;
Pyruvate:ferredoxin oxidoreductase
fig|6666666.229868.peg.86 CDS CM001794.1 89290 90054 1 + 765 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229868.peg.87 CDS CM001794.1 90101 90634 2 + 534 hypothetical protein - none -
fig|6666666.229868.peg.88 CDS CM001794.1 90647 91987 2 + 1341 hypothetical protein - none -
fig|6666666.229868.peg.89 CDS CM001794.1 92011 92397 1 + 387 hypothetical protein - none -
fig|6666666.229868.peg.90 CDS CM001794.1 92708 92583 -2 - 126 hypothetical protein - none -
fig|6666666.229868.peg.91 CDS CM001794.1 92790 92993 3 + 204 hypothetical protein - none -
fig|6666666.229868.peg.92 CDS CM001794.1 92998 93744 1 + 747 hypothetical protein - none -
fig|6666666.229868.peg.93 CDS CM001794.1 93766 94218 1 + 453 hypothetical protein - none -
fig|6666666.229868.peg.94 CDS CM001794.1 94279 94401 1 + 123 hypothetical protein - none -
fig|6666666.229868.peg.95 CDS CM001794.1 94388 94654 2 + 267 hypothetical protein - none -
fig|6666666.229868.peg.96 CDS CM001794.1 94651 94938 1 + 288 hypothetical protein - none -
fig|6666666.229868.peg.97 CDS CM001794.1 94940 95410 2 + 471 hypothetical protein - none -
fig|6666666.229868.peg.98 CDS CM001794.1 95411 95740 2 + 330 hypothetical protein - none -
fig|6666666.229868.peg.99 CDS CM001794.1 95737 96762 1 + 1026 DNA-cytosine methyltransferase (EC 2.1.1.37) DNA repair, bacterial
fig|6666666.229868.peg.100 CDS CM001794.1 96804 97112 3 + 309 Phage protein - none -
fig|6666666.229868.peg.101 CDS CM001794.1 97124 97390 2 + 267 hypothetical protein - none -
fig|6666666.229868.peg.102 CDS CM001794.1 97403 97738 2 + 336 hypothetical protein - none -
fig|6666666.229868.peg.103 CDS CM001794.1 97757 98116 2 + 360 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229868.peg.104 CDS CM001794.1 98109 98876 3 + 768 Adenine-specific methyltransferase (EC 2.1.1.72) CBSS-257314.1.peg.752
fig|6666666.229868.peg.105 CDS CM001794.1 98893 99969 1 + 1077 Phage replication initiation protein Phage replication
fig|6666666.229868.peg.106 CDS CM001794.1 99979 100722 1 + 744 Bacteriophage-encoded homolog of DNA replication protein DnaC - none -
fig|6666666.229868.peg.107 CDS CM001794.1 100878 101033 3 + 156 hypothetical protein - none -
fig|6666666.229868.peg.108 CDS CM001794.1 101039 101245 2 + 207 hypothetical protein - none -
fig|6666666.229868.peg.109 CDS CM001794.1 101455 101772 1 + 318 hypothetical protein - none -
fig|6666666.229868.peg.110 CDS CM001794.1 103009 101888 -1 - 1122 hypothetical protein - none -
fig|6666666.229868.peg.111 CDS CM001794.1 103940 102999 -2 - 942 hypothetical protein - none -
fig|6666666.229868.peg.112 CDS CM001794.1 105939 104014 -3 - 1926 Lea protein - soybean - none -
fig|6666666.229868.peg.113 CDS CM001794.1 108453 106150 -3 - 2304 phage minor structural protein, putative - none -
fig|6666666.229868.peg.114 CDS CM001794.1 108581 109000 2 + 420 hypothetical protein - none -
fig|6666666.229868.peg.115 CDS CM001794.1 109010 109750 2 + 741 hypothetical protein - none -
fig|6666666.229868.peg.116 CDS CM001794.1 109725 109946 3 + 222 hypothetical protein - none -
fig|6666666.229868.peg.117 CDS CM001794.1 110150 110731 2 + 582 hypothetical protein - none -
fig|6666666.229868.peg.118 CDS CM001794.1 110760 111170 3 + 411 hypothetical protein - none -
fig|6666666.229868.peg.119 CDS CM001794.1 111174 111584 3 + 411 hypothetical protein - none -
fig|6666666.229868.peg.120 CDS CM001794.1 117819 111649 -3 - 6171 Ig-like repeat domain protein 1 - none -
fig|6666666.229868.peg.121 CDS CM001794.1 119369 117831 -2 - 1539 Conjugative transfer protein TrbI Conjugative transfer
fig|6666666.229868.peg.122 CDS CM001794.1 120402 119362 -3 - 1041 Conjugative transfer protein TrbG Conjugative transfer
fig|6666666.229868.peg.123 CDS CM001794.1 121096 120404 -1 - 693 Conjugative transfer protein TrbF Conjugative transfer
fig|6666666.229868.peg.124 CDS CM001794.1 123032 121137 -2 - 1896 Conjugative transfer protein TrbL Conjugative transfer
fig|6666666.229868.peg.125 CDS CM001794.1 123981 123037 -3 - 945 hypothetical protein - none -
fig|6666666.229868.peg.126 CDS CM001794.1 126492 123991 -3 - 2502 Conjugative transfer protein TrbE Conjugative transfer
fig|6666666.229868.peg.127 CDS CM001794.1 126829 126512 -1 - 318 hypothetical protein - none -
fig|6666666.229868.peg.128 CDS CM001794.1 127088 126822 -2 - 267 hypothetical protein - none -
fig|6666666.229868.peg.129 CDS CM001794.1 127473 127159 -3 - 315 hypothetical protein - none -
fig|6666666.229868.peg.130 CDS CM001794.1 127834 127484 -1 - 351 hypothetical protein - none -
fig|6666666.229868.peg.131 CDS CM001794.1 128838 127888 -3 - 951 Conjugative transfer protein TrbB Conjugative transfer
fig|6666666.229868.peg.132 CDS CM001794.1 129305 128838 -2 - 468 hypothetical protein - none -
fig|6666666.229868.peg.133 CDS CM001794.1 131478 129289 -3 - 2190 Coupling protein VirD4, ATPase required for T-DNA transfer - none -
fig|6666666.229868.peg.134 CDS CM001794.1 132771 131569 -3 - 1203 Type IV secretory pathway, VirD2 components (relaxase) - none -
fig|6666666.229868.peg.135 CDS CM001794.1 133024 135075 1 + 2052 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229868.peg.136 CDS CM001794.1 135288 136706 3 + 1419 hypothetical protein - none -
fig|6666666.229868.peg.137 CDS CM001794.1 138187 136919 -1 - 1269 Outer membrane protein - none -
fig|6666666.229868.peg.138 CDS CM001794.1 138520 138777 1 + 258 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.139 CDS CM001794.1 138782 139045 2 + 264 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.140 CDS CM001794.1 139160 139438 2 + 279 hypothetical protein - none -
fig|6666666.229868.peg.141 CDS CM001794.1 139422 139829 3 + 408 VapC toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.142 CDS CM001794.1 140423 140818 2 + 396 hypothetical protein - none -
fig|6666666.229868.peg.143 CDS CM001794.1 140872 141777 1 + 906 transcriptional regulator, putative - none -
fig|6666666.229868.peg.144 CDS CM001794.1 141854 142366 2 + 513 hypothetical protein - none -
fig|6666666.229868.peg.145 CDS CM001794.1 144452 142407 -2 - 2046 ABC transporter permease protein - none -
fig|6666666.229868.peg.146 CDS CM001794.1 145242 144481 -3 - 762 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.147 CDS CM001794.1 146434 145340 -1 - 1095 sensor histidine kinase, putative - none -
fig|6666666.229868.peg.148 CDS CM001794.1 147110 146412 -2 - 699 Two-component response regulator BceR - none -
fig|6666666.229868.peg.149 CDS CM001794.1 148425 147253 -3 - 1173 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) - none -
fig|6666666.229868.peg.150 CDS CM001794.1 149108 148437 -2 - 672 membrane protein, putative - none -
fig|6666666.229868.peg.151 CDS CM001794.1 149854 149120 -1 - 735 membrane protein, putative - none -
fig|6666666.229868.peg.152 CDS CM001794.1 150106 152178 1 + 2073 Pyrophosphate-energized proton pump (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229868.peg.153 CDS CM001794.1 153335 152301 -2 - 1035 Predicted nicotinate-regulated transporter BH3254 - none -
fig|6666666.229868.peg.154 CDS CM001794.1 153560 154048 2 + 489 hypothetical protein - none -
fig|6666666.229868.peg.155 CDS CM001794.1 155233 154115 -1 - 1119 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) - none -
fig|6666666.229868.peg.156 CDS CM001794.1 156089 155274 -2 - 816 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) - none -
fig|6666666.229868.peg.157 CDS CM001794.1 156218 156841 2 + 624 hypothetical protein - none -
fig|6666666.229868.peg.158 CDS CM001794.1 156798 157514 3 + 717 hypothetical protein - none -
fig|6666666.229868.peg.159 CDS CM001794.1 157507 158244 1 + 738 ABC transporter, ATP-binding protein, ortholog to Borrelia burgdorferi BB0466 - none -
fig|6666666.229868.peg.160 CDS CM001794.1 158256 158867 3 + 612 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Translation termination factors bacterial
fig|6666666.229868.peg.161 CDS CM001794.1 158919 159623 3 + 705 hypothetical protein - none -
fig|6666666.229868.peg.162 CDS CM001794.1 159652 160932 1 + 1281 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229868.peg.163 CDS CM001794.1 161169 163403 3 + 2235 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.164 CDS CM001794.1 163495 164481 1 + 987 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.165 CDS CM001794.1 164484 165446 3 + 963 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.166 CDS CM001794.1 165443 166441 2 + 999 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.167 CDS CM001794.1 166434 167402 3 + 969 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.168 CDS CM001794.1 168267 167386 -3 - 882 hypothetical protein - none -
fig|6666666.229868.peg.169 CDS CM001794.1 168365 169309 2 + 945 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229868.peg.170 CDS CM001794.1 170106 169306 -3 - 801 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229868.peg.171 CDS CM001794.1 170453 170130 -2 - 324 Anti-sigma F factor antagonist (spoIIAA-2); Anti-sigma B factor antagonist RsbV SigmaB stress responce regulation
fig|6666666.229868.peg.172 CDS CM001794.1 172589 170463 -2 - 2127 Serine phosphatase RsbU, regulator of sigma subunit SigmaB stress responce regulation
fig|6666666.229868.peg.173 CDS CM001794.1 174044 172593 -2 - 1452 Serine phosphatase RsbU, regulator of sigma subunit SigmaB stress responce regulation
fig|6666666.229868.peg.174 CDS CM001794.1 175255 174116 -1 - 1140 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229868.peg.175 CDS CM001794.1 177300 175360 -3 - 1941 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229868.peg.176 CDS CM001794.1 178063 177320 -1 - 744 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229868.peg.177 CDS CM001794.1 178347 178508 3 + 162 hypothetical protein - none -
fig|6666666.229868.peg.178 CDS CM001794.1 178956 178621 -3 - 336 hypothetical protein - none -
fig|6666666.229868.peg.179 CDS CM001794.1 180636 179029 -3 - 1608 serine/threonine kinase - none -
fig|6666666.229868.peg.180 CDS CM001794.1 182345 180657 -2 - 1689 predicted ATP-dependent endonuclease, OLD family - none -
fig|6666666.229868.peg.181 CDS CM001794.1 183560 182784 -2 - 777 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.182 CDS CM001794.1 184305 183547 -3 - 759 Cobalt-precorrin-6x reductase (EC 1.3.1.54) Cobalamin synthesis
fig|6666666.229868.peg.183 CDS CM001794.1 185024 184302 -2 - 723 Cobalt-precorrin-3b C17-methyltransferase Cobalamin synthesis
fig|6666666.229868.peg.184 CDS CM001794.1 186662 185052 -2 - 1611 FIG01186987: hypothetical protein - none -
fig|6666666.229868.peg.185 CDS CM001794.1 186787 187722 1 + 936 COG1180: Radical SAM, Pyruvate-formate lyase-activating enzyme like - none -
fig|6666666.229868.peg.186 CDS CM001794.1 189141 187759 -3 - 1383 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229868.peg.187 CDS CM001794.1 189978 189163 -3 - 816 hypothetical protein - none -
fig|6666666.229868.peg.188 CDS CM001794.1 191070 190033 -3 - 1038 Cobalamin biosynthesis protein CbiG Cobalamin synthesis
fig|6666666.229868.peg.189 CDS CM001794.1 191816 191067 -2 - 750 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Cobalamin synthesis
fig|6666666.229868.peg.190 CDS CM001794.1 192325 191936 -1 - 390 hypothetical protein - none -
fig|6666666.229868.peg.191 CDS CM001794.1 192629 192318 -2 - 312 hypothetical protein - none -
fig|6666666.229868.peg.192 CDS CM001794.1 192764 193519 2 + 756 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229868.peg.193 CDS CM001794.1 193512 194408 3 + 897 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229868.peg.194 CDS CM001794.1 194432 195016 2 + 585 hypothetical protein - none -
fig|6666666.229868.peg.195 CDS CM001794.1 195016 195816 1 + 801 FIG00552655: hypothetical protein - none -
fig|6666666.229868.peg.196 CDS CM001794.1 196709 195792 -2 - 918 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229868.peg.197 CDS CM001794.1 196902 197837 3 + 936 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229868.peg.198 CDS CM001794.1 197851 198828 1 + 978 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229868.peg.199 CDS CM001794.1 198842 199588 2 + 747 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229868.peg.200 CDS CM001794.1 199730 200923 2 + 1194 Short-chain alcohol dehydrogenase family - none -
fig|6666666.229868.peg.201 CDS CM001794.1 201007 202347 1 + 1341 ATP-dependent DNA helicase - none -
fig|6666666.229868.peg.202 CDS CM001794.1 202380 203174 3 + 795 cysteine protease domain, YopT-type - none -
fig|6666666.229868.peg.203 CDS CM001794.1 203249 205081 2 + 1833 internalin-related protein - none -
fig|6666666.229868.peg.204 CDS CM001794.1 205189 205761 1 + 573 Biotin carboxyl carrier protein of acetyl-CoA carboxylase Fatty Acid Biosynthesis FASII
fig|6666666.229868.peg.205 CDS CM001794.1 205772 207091 2 + 1320 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) Fatty Acid Biosynthesis FASII
fig|6666666.229868.peg.206 CDS CM001794.1 207267 208058 3 + 792 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Colicin V and Bacteriocin Production Cluster;
Fatty Acid Biosynthesis FASII
fig|6666666.229868.peg.207 CDS CM001794.1 208079 208996 2 + 918 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229868.peg.208 CDS CM001794.1 210623 209100 -2 - 1524 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.229868.peg.209 CDS CM001794.1 211285 210656 -1 - 630 Endonuclease/Exonuclease/phosphatase family protein - none -
fig|6666666.229868.peg.210 CDS CM001794.1 212180 213985 2 + 1806 hypothetical protein - none -
fig|6666666.229868.peg.211 CDS CM001794.1 213989 214927 2 + 939 permease, putative - none -
fig|6666666.229868.peg.212 CDS CM001794.1 214924 215697 1 + 774 DUF1980 domain-containing protein - none -
fig|6666666.229868.peg.213 CDS CM001794.1 216690 215722 -3 - 969 FIG022979: MoxR-like ATPases - none -
fig|6666666.229868.peg.214 CDS CM001794.1 220453 216737 -1 - 3717 FIG001454: Transglutaminase-like enzymes, putative cysteine proteases - none -
fig|6666666.229868.peg.215 CDS CM001794.1 221771 220437 -2 - 1335 hypothetical protein - none -
fig|6666666.229868.peg.216 CDS CM001794.1 227495 227806 2 + 312 Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.229868.peg.217 CDS CM001794.1 227821 229278 1 + 1458 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.229868.peg.218 CDS CM001794.1 229271 230752 2 + 1482 Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7) tRNA aminoacylation, Asp and Asn;
tRNA aminoacylation, Glu and Gln
fig|6666666.229868.peg.219 CDS CM001794.1 230926 230813 -1 - 114 hypothetical protein - none -
fig|6666666.229868.peg.220 CDS CM001794.1 232224 231106 -3 - 1119 conserved domain protein - none -
fig|6666666.229868.peg.221 CDS CM001794.1 234619 232334 -1 - 2286 serine/threonine protein kinase - none -
fig|6666666.229868.peg.222 CDS CM001794.1 235582 234875 -1 - 708 hypothetical protein - none -
fig|6666666.229868.peg.223 CDS CM001794.1 235926 236039 3 + 114 hypothetical protein - none -
fig|6666666.229868.peg.224 CDS CM001794.1 237051 236752 -3 - 300 membrane protein, putative - none -
fig|6666666.229868.peg.225 CDS CM001794.1 238047 237064 -3 - 984 hypothetical protein - none -
fig|6666666.229868.peg.226 CDS CM001794.1 238724 238044 -2 - 681 hypothetical protein - none -
fig|6666666.229868.peg.227 CDS CM001794.1 238818 238705 -3 - 114 hypothetical protein - none -
fig|6666666.229868.peg.228 CDS CM001794.1 239584 238823 -1 - 762 hypothetical protein - none -
fig|6666666.229868.peg.229 CDS CM001794.1 239999 239649 -2 - 351 hypothetical protein - none -
fig|6666666.229868.peg.230 CDS CM001794.1 241384 240203 -1 - 1182 hypothetical protein - none -
fig|6666666.229868.peg.231 CDS CM001794.1 241710 241435 -3 - 276 hypothetical protein - none -
fig|6666666.229868.peg.232 CDS CM001794.1 242393 241743 -2 - 651 FIG01197686: hypothetical protein - none -
fig|6666666.229868.peg.233 CDS CM001794.1 242946 242449 -3 - 498 hypothetical protein - none -
fig|6666666.229868.peg.234 CDS CM001794.1 243779 243177 -2 - 603 hypothetical protein - none -
fig|6666666.229868.peg.235 CDS CM001794.1 244431 244033 -3 - 399 hypothetical protein - none -
fig|6666666.229868.peg.236 CDS CM001794.1 245229 244624 -3 - 606 hypothetical protein - none -
fig|6666666.229868.peg.237 CDS CM001794.1 245872 245240 -1 - 633 hypothetical protein - none -
fig|6666666.229868.peg.238 CDS CM001794.1 246053 246580 2 + 528 hypothetical protein - none -
fig|6666666.229868.peg.239 CDS CM001794.1 246634 247188 1 + 555 hypothetical protein - none -
fig|6666666.229868.peg.240 CDS CM001794.1 247204 247743 1 + 540 hypothetical protein - none -
fig|6666666.229868.peg.241 CDS CM001794.1 247758 248387 3 + 630 hypothetical protein - none -
fig|6666666.229868.peg.242 CDS CM001794.1 248419 249318 1 + 900 FIG01197298: hypothetical protein - none -
fig|6666666.229868.peg.243 CDS CM001794.1 249333 250397 3 + 1065 ankyrin repeat protein - none -
fig|6666666.229868.peg.244 CDS CM001794.1 250453 250983 1 + 531 conserved hypothetical protein - none -
fig|6666666.229868.peg.245 CDS CM001794.1 251061 251900 3 + 840 alpha/beta fold family hydrolase - none -
fig|6666666.229868.peg.246 CDS CM001794.1 251946 252290 3 + 345 TfoX N-terminal domain family protein - none -
fig|6666666.229868.peg.247 CDS CM001794.1 252268 252876 1 + 609 hypothetical protein - none -
fig|6666666.229868.peg.248 CDS CM001794.1 252896 253921 2 + 1026 FIG01188200: hypothetical protein - none -
fig|6666666.229868.peg.249 CDS CM001794.1 254405 253992 -2 - 414 hypothetical protein - none -
fig|6666666.229868.peg.250 CDS CM001794.1 255510 254539 -3 - 972 serine/threonine kinase - none -
fig|6666666.229868.peg.251 CDS CM001794.1 256192 255545 -1 - 648 hypothetical protein - none -
fig|6666666.229868.peg.252 CDS CM001794.1 256738 256256 -1 - 483 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.253 CDS CM001794.1 257853 256762 -3 - 1092 hypothetical protein - none -
fig|6666666.229868.peg.254 CDS CM001794.1 258915 257932 -3 - 984 hypothetical protein - none -
fig|6666666.229868.peg.255 CDS CM001794.1 259956 258982 -3 - 975 hypothetical protein - none -
fig|6666666.229868.peg.256 CDS CM001794.1 260171 260971 2 + 801 FIG01196964: hypothetical protein - none -
fig|6666666.229868.peg.257 CDS CM001794.1 261662 260964 -2 - 699 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.258 CDS CM001794.1 262311 261724 -3 - 588 hypothetical protein - none -
fig|6666666.229868.peg.259 CDS CM001794.1 262651 262349 -1 - 303 TPR domain protein - none -
fig|6666666.229868.peg.260 CDS CM001794.1 263569 262835 -1 - 735 hypothetical protein - none -
fig|6666666.229868.peg.261 CDS CM001794.1 264014 263574 -2 - 441 hypothetical protein - none -
fig|6666666.229868.peg.262 CDS CM001794.1 264549 264076 -3 - 474 unknown - none -
fig|6666666.229868.peg.263 CDS CM001794.1 265171 264578 -1 - 594 hypothetical protein - none -
fig|6666666.229868.peg.264 CDS CM001794.1 265375 265229 -1 - 147 hypothetical protein - none -
fig|6666666.229868.peg.265 CDS CM001794.1 266193 265399 -3 - 795 hypothetical protein - none -
fig|6666666.229868.peg.266 CDS CM001794.1 267000 266230 -3 - 771 hypothetical protein - none -
fig|6666666.229868.peg.267 CDS CM001794.1 267620 267087 -2 - 534 hypothetical protein - none -
fig|6666666.229868.peg.268 CDS CM001794.1 561901 562188 1 + 288 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.269 CDS CM001794.1 562453 562722 1 + 270 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229868.peg.270 CDS CM001794.1 564160 562790 -1 - 1371 Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.271 CDS CM001794.1 564843 564154 -3 - 690 Transmembrane component BL0694 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.272 CDS CM001794.1 565430 564843 -2 - 588 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.273 CDS CM001794.1 567176 565452 -2 - 1725 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.274 CDS CM001794.1 568937 567180 -2 - 1758 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.275 CDS CM001794.1 569163 570158 3 + 996 Transcriptional regulator, AraC family - none -
fig|6666666.229868.peg.276 CDS CM001794.1 570694 570978 1 + 285 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.277 CDS CM001794.1 571146 572684 3 + 1539 Glycine/sarcosine/betaine reductase component C chain 1 Glycine reductase, sarcosine reductase and betaine reductase
fig|6666666.229868.peg.278 CDS CM001794.1 572697 573851 3 + 1155 Glycine/sarcosine/betaine reductase component C chain 2 Glycine reductase, sarcosine reductase and betaine reductase
fig|6666666.229868.peg.279 CDS CM001794.1 574062 573934 -3 - 129 Thioredoxin Glycine reductase, sarcosine reductase and betaine reductase
fig|6666666.229868.peg.280 CDS CM001794.1 574103 574267 2 + 165 hypothetical protein - none -
fig|6666666.229868.peg.281 CDS CM001794.1 574495 576024 1 + 1530 FIG002344: Hydrolase (HAD superfamily) CBSS-469378.4.peg.430
fig|6666666.229868.peg.282 CDS CM001794.1 576424 576068 -1 - 357 PIN domain protein - none -
fig|6666666.229868.peg.283 CDS CM001794.1 576713 576462 -2 - 252 hypothetical protein - none -
fig|6666666.229868.peg.284 CDS CM001794.1 578573 576771 -2 - 1803 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229868.peg.285 CDS CM001794.1 578756 579889 2 + 1134 filamentation induced by cAMP protein Fic - none -
fig|6666666.229868.peg.286 CDS CM001794.1 580412 579882 -2 - 531 COG2110, Macro domain, possibly ADP-ribose binding module - none -
fig|6666666.229868.peg.287 CDS CM001794.1 580682 581785 2 + 1104 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229868.peg.288 CDS CM001794.1 581794 582876 1 + 1083 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229868.peg.289 CDS CM001794.1 583156 584001 1 + 846 FIG00697026: hypothetical protein - none -
fig|6666666.229868.peg.290 CDS CM001794.1 583988 584905 2 + 918 Adenine-specific methyltransferase (EC 2.1.1.72) CBSS-257314.1.peg.752
fig|6666666.229868.peg.291 CDS CM001794.1 584954 585901 2 + 948 hypothetical protein - none -
fig|6666666.229868.peg.292 CDS CM001794.1 586086 587366 3 + 1281 hypothetical protein - none -
fig|6666666.229868.peg.293 CDS CM001794.1 587438 587668 2 + 231 FIG01186987: hypothetical protein - none -
fig|6666666.229868.peg.294 CDS CM001794.1 587966 588571 2 + 606 hypothetical protein - none -
fig|6666666.229868.peg.295 CDS CM001794.1 589025 589201 2 + 177 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.296 CDS CM001794.1 589176 589493 3 + 318 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.297 CDS CM001794.1 589760 590419 2 + 660 hypothetical protein - none -
fig|6666666.229868.peg.298 CDS CM001794.1 590444 590968 2 + 525 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.299 CDS CM001794.1 590968 591630 1 + 663 hypothetical protein - none -
fig|6666666.229868.peg.300 CDS CM001794.1 591658 591798 1 + 141 hypothetical protein - none -
fig|6666666.229868.peg.301 CDS CM001794.1 591819 592301 3 + 483 hypothetical protein - none -
fig|6666666.229868.peg.302 CDS CM001794.1 593052 592534 -3 - 519 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229868.peg.303 CDS CM001794.1 594295 593060 -1 - 1236 SAM-dependent methyltransferases - none -
fig|6666666.229868.peg.304 CDS CM001794.1 594740 596419 2 + 1680 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) ABC transporter branched-chain amino acid (TC 3.A.1.4.1)
fig|6666666.229868.peg.305 CDS CM001794.1 596428 597990 1 + 1563 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229868.peg.306 CDS CM001794.1 598957 599901 1 + 945 hypothetical protein - none -
fig|6666666.229868.peg.307 CDS CM001794.1 599946 601088 3 + 1143 TPR domain protein, putative component of TonB system Ton and Tol transport systems
fig|6666666.229868.peg.308 CDS CM001794.1 601171 602148 1 + 978 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components - none -
fig|6666666.229868.peg.309 CDS CM001794.1 602120 602851 2 + 732 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component - none -
fig|6666666.229868.peg.310 CDS CM001794.1 603794 603279 -2 - 516 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) Cobalamin synthesis
fig|6666666.229868.peg.311 CDS CM001794.1 605150 603864 -2 - 1287 Arsenic efflux pump protein - none -
fig|6666666.229868.peg.312 CDS CM001794.1 606363 605197 -3 - 1167 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.229868.peg.313 CDS CM001794.1 607742 606387 -2 - 1356 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229868.peg.314 CDS CM001794.1 607927 609723 1 + 1797 surface antigen, putative - none -
fig|6666666.229868.peg.315 CDS CM001794.1 610800 609736 -3 - 1065 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229868.peg.316 CDS CM001794.1 612376 610856 -1 - 1521 Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24) tRNA aminoacylation, Glu and Gln;
tRNA aminoacylation, Glu and Gln
fig|6666666.229868.peg.317 CDS CM001794.1 612538 613524 1 + 987 lipoprotein, putative - none -
fig|6666666.229868.peg.318 CDS CM001794.1 613645 613508 -1 - 138 hypothetical protein - none -
fig|6666666.229868.peg.319 CDS CM001794.1 613951 613670 -1 - 282 hypothetical protein - none -
fig|6666666.229868.peg.320 CDS CM001794.1 614678 614022 -2 - 657 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.229868.peg.321 CDS CM001794.1 614755 615165 1 + 411 hypothetical protein - none -
fig|6666666.229868.peg.322 CDS CM001794.1 615168 615881 3 + 714 ABC-type multidrug/protein/lipid transport system, ATPase component - none -
fig|6666666.229868.peg.323 CDS CM001794.1 615841 616764 1 + 924 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229868.peg.324 CDS CM001794.1 617750 616761 -2 - 990 Atypical L-asparaginase (EC 3.5.1.1), Rhizobium type - none -
fig|6666666.229868.peg.325 CDS CM001794.1 617939 618172 2 + 234 Programmed cell death antitoxin MazE MazEF toxin-antitoxing (programmed cell death) system
fig|6666666.229868.peg.326 CDS CM001794.1 618166 618504 1 + 339 Programmed cell death toxin MazF MazEF toxin-antitoxing (programmed cell death) system
fig|6666666.229868.peg.327 CDS CM001794.1 618544 619686 1 + 1143 Expressed protein - none -
fig|6666666.229868.peg.328 CDS CM001794.1 619791 621812 3 + 2022 T. pallidum predicted coding region TP0022 - none -
fig|6666666.229868.peg.329 CDS CM001794.1 621845 622609 2 + 765 Putative hydrolase of the alpha/beta superfamily - none -
fig|6666666.229868.peg.330 CDS CM001794.1 622620 623054 3 + 435 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.331 CDS CM001794.1 623060 623947 2 + 888 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229868.peg.332 CDS CM001794.1 623966 624754 2 + 789 membrane protein, putative - none -
fig|6666666.229868.peg.333 CDS CM001794.1 625655 624756 -2 - 900 Adenosine deaminase (EC 3.5.4.4) Purine conversions
fig|6666666.229868.peg.334 CDS CM001794.1 626531 625764 -2 - 768 Carboxylesterase (EC 3.1.1.1) - none -
fig|6666666.229868.peg.335 CDS CM001794.1 626728 628053 1 + 1326 FIG00818465: hypothetical protein - none -
fig|6666666.229868.peg.336 CDS CM001794.1 629878 628121 -1 - 1758 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.337 CDS CM001794.1 631628 629868 -2 - 1761 ABC transporter, ATP-binding/permease protein - none -
fig|6666666.229868.peg.338 CDS CM001794.1 631834 633642 1 + 1809 Ferric iron ABC transporter, permease protein - none -
fig|6666666.229868.peg.339 CDS CM001794.1 633642 635291 3 + 1650 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229868.peg.340 CDS CM001794.1 635347 637437 1 + 2091 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.341 CDS CM001794.1 637418 637570 2 + 153 hypothetical protein - none -
fig|6666666.229868.peg.342 CDS CM001794.1 637797 639887 3 + 2091 Methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.343 CDS CM001794.1 639960 640634 3 + 675 FIG015373: Membrane protein CBSS-521098.4.peg.1460
fig|6666666.229868.peg.344 CDS CM001794.1 640627 641625 1 + 999 FIG001614: Membrane protein CBSS-521098.4.peg.1460
fig|6666666.229868.peg.345 CDS CM001794.1 641643 642296 3 + 654 Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) Omega peptidases (EC 3.4.19.-)
fig|6666666.229868.peg.346 CDS CM001794.1 642474 643937 3 + 1464 hypothetical protein - none -
fig|6666666.229868.peg.347 CDS CM001794.1 645472 644036 -1 - 1437 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.229868.peg.348 CDS CM001794.1 648006 645496 -3 - 2511 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.229868.peg.349 CDS CM001794.1 648840 648031 -3 - 810 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.229868.peg.350 CDS CM001794.1 652011 648919 -3 - 3093 Exonuclease SbcC DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.229868.peg.351 CDS CM001794.1 653187 652036 -3 - 1152 Exonuclease SbcD DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.229868.peg.352 CDS CM001794.1 653234 654892 2 + 1659 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.353 CDS CM001794.1 654958 655359 1 + 402 Transcriptional regulator, GntR family - none -
fig|6666666.229868.peg.354 CDS CM001794.1 655452 656153 3 + 702 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.355 CDS CM001794.1 656155 656976 1 + 822 hypothetical protein - none -
fig|6666666.229868.peg.356 CDS CM001794.1 657854 657000 -2 - 855 Transposase - none -
fig|6666666.229868.peg.357 CDS CM001794.1 658025 658609 2 + 585 no significant homology. - none -
fig|6666666.229868.peg.358 CDS CM001794.1 658643 659080 2 + 438 Flavodoxin Flavodoxin
fig|6666666.229868.peg.359 CDS CM001794.1 663753 659173 -3 - 4581 putative autotransporter protein - none -
fig|6666666.229868.peg.360 CDS CM001794.1 664036 665337 1 + 1302 hypothetical protein - none -
fig|6666666.229868.peg.361 CDS CM001794.1 665904 665731 -3 - 174 hypothetical protein - none -
fig|6666666.229868.peg.362 CDS CM001794.1 666079 666477 1 + 399 hypothetical protein - none -
fig|6666666.229868.peg.363 CDS CM001794.1 666521 666691 2 + 171 hypothetical protein - none -
fig|6666666.229868.peg.364 CDS CM001794.1 668618 666846 -2 - 1773 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) / 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) Entner-Doudoroff Pathway;
Entner-Doudoroff Pathway
fig|6666666.229868.peg.365 CDS CM001794.1 668773 669060 1 + 288 hypothetical protein - none -
fig|6666666.229868.peg.366 CDS CM001794.1 669117 669641 3 + 525 hypothetical protein - none -
fig|6666666.229868.peg.367 CDS CM001794.1 669716 671587 2 + 1872 adenylate/guanylate cyclase - none -
fig|6666666.229868.peg.368 CDS CM001794.1 671584 673662 1 + 2079 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229868.peg.369 CDS CM001794.1 673685 675382 2 + 1698 CoA-disulfide reductase (EC 1.8.1.14) CoA disulfide thiol-disulfide redox system
fig|6666666.229868.peg.370 CDS CM001794.1 675393 676751 3 + 1359 amino acid permease family protein - none -
fig|6666666.229868.peg.371 CDS CM001794.1 676769 678025 2 + 1257 YeeE/YedE family protein - none -
fig|6666666.229868.peg.372 CDS CM001794.1 679382 678075 -2 - 1308 Ribonuclease BN-like family protein - none -
fig|6666666.229868.peg.373 CDS CM001794.1 679999 679394 -1 - 606 regulatory protein, LuxR:Response regulator receiver - none -
fig|6666666.229868.peg.374 CDS CM001794.1 680951 679980 -2 - 972 histidine kinase-related ATPase, putative - none -
fig|6666666.229868.peg.375 CDS CM001794.1 680905 681081 1 + 177 hypothetical protein - none -
fig|6666666.229868.peg.376 CDS CM001794.1 681231 682433 3 + 1203 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) - none -
fig|6666666.229868.peg.377 CDS CM001794.1 683112 682486 -3 - 627 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229868.peg.378 CDS CM001794.1 684815 683133 -2 - 1683 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229868.peg.379 CDS CM001794.1 685809 684799 -3 - 1011 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229868.peg.380 CDS CM001794.1 685940 685806 -2 - 135 hypothetical protein - none -
fig|6666666.229868.peg.381 CDS CM001794.1 686046 688499 3 + 2454 hypothetical protein - none -
fig|6666666.229868.peg.382 CDS CM001794.1 690348 688588 -3 - 1761 Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26) - none -
fig|6666666.229868.peg.383 CDS CM001794.1 691923 690364 -3 - 1560 Putative novel glycerol kinase, FGGY family - none -
fig|6666666.229868.peg.384 CDS CM001794.1 692276 691920 -2 - 357 FIG01187913: hypothetical protein - none -
fig|6666666.229868.peg.385 CDS CM001794.1 693600 692266 -3 - 1335 Sarcosine oxidase alpha subunit (EC 1.5.3.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229868.peg.386 CDS CM001794.1 695351 693597 -2 - 1755 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229868.peg.387 CDS CM001794.1 696228 695356 -3 - 873 predicted biotin regulatory protein BioR (GntR family) Biotin biosynthesis
fig|6666666.229868.peg.388 CDS CM001794.1 696518 696390 -2 - 129 conserved domain protein - none -
fig|6666666.229868.peg.389 CDS CM001794.1 696520 696645 1 + 126 hypothetical protein - none -
fig|6666666.229868.peg.390 CDS CM001794.1 698061 696688 -3 - 1374 L-cystine uptake protein TcyP - none -
fig|6666666.229868.peg.391 CDS CM001794.1 698357 699964 2 + 1608 Aspartate carbamoyltransferase (EC 2.1.3.2) / Aspartate carbamoyltransferase regulatory chain (PyrI) De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis
fig|6666666.229868.peg.392 CDS CM001794.1 702366 699961 -3 - 2406 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) - none -
fig|6666666.229868.peg.393 CDS CM001794.1 702856 702542 -1 - 315 DNA-binding protein - none -
fig|6666666.229868.peg.394 CDS CM001794.1 703070 704665 2 + 1596 B. burgdorferi predicted coding region BB0351 - none -
fig|6666666.229868.peg.395 CDS CM001794.1 704625 705761 3 + 1137 GGDEF domain protein - none -
fig|6666666.229868.peg.396 CDS CM001794.1 705783 706412 3 + 630 rhomboid family protein - none -
fig|6666666.229868.peg.397 CDS CM001794.1 706433 707113 2 + 681 FIG01187374: hypothetical protein - none -
fig|6666666.229868.peg.398 CDS CM001794.1 707138 708130 2 + 993 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229868.peg.399 CDS CM001794.1 709736 708171 -2 - 1566 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229868.peg.400 CDS CM001794.1 710958 709759 -3 - 1200 Transcriptional regulators - none -
fig|6666666.229868.peg.401 CDS CM001794.1 711157 711597 1 + 441 Flagellar biosynthesis protein FliS Flagellum
fig|6666666.229868.peg.402 CDS CM001794.1 711608 712081 2 + 474 hypothetical protein - none -
fig|6666666.229868.peg.403 CDS CM001794.1 712992 712078 -3 - 915 lipoprotein, putative - none -
fig|6666666.229868.peg.404 CDS CM001794.1 713896 713015 -1 - 882 membrane protein, putative - none -
fig|6666666.229868.peg.405 CDS CM001794.1 714551 713904 -2 - 648 bll7755; hypothetical protein - none -
fig|6666666.229868.peg.406 CDS CM001794.1 714733 715074 1 + 342 iron-dependent transcriptional regulator - none -
fig|6666666.229868.peg.407 CDS CM001794.1 715990 715076 -1 - 915 Signal peptidase-like protein Heat shock dnaK gene cluster extended
fig|6666666.229868.peg.408 CDS CM001794.1 716561 716001 -2 - 561 DUF327 domain-containing protein - none -
fig|6666666.229868.peg.409 CDS CM001794.1 716990 716571 -2 - 420 hypothetical protein - none -
fig|6666666.229868.peg.410 CDS CM001794.1 718024 716993 -1 - 1032 M23/M37 peptidase domain protein - none -
fig|6666666.229868.peg.411 CDS CM001794.1 718275 719822 3 + 1548 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229868.peg.412 CDS CM001794.1 720032 719898 -2 - 135 hypothetical protein - none -
fig|6666666.229868.peg.413 CDS CM001794.1 720398 722023 2 + 1626 Oligo-1,6-glucosidase (EC 3.2.1.10) Maltose and Maltodextrin Utilization
fig|6666666.229868.peg.414 CDS CM001794.1 722118 723122 3 + 1005 hypothetical protein - none -
fig|6666666.229868.peg.415 CDS CM001794.1 723210 723932 3 + 723 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229868.peg.416 CDS CM001794.1 723950 724981 2 + 1032 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229868.peg.417 CDS CM001794.1 724978 726120 1 + 1143 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229868.peg.418 CDS CM001794.1 727439 726147 -2 - 1293 cyclic nucleotide binding protein - none -
fig|6666666.229868.peg.419 CDS CM001794.1 727512 729647 3 + 2136 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism
fig|6666666.229868.peg.420 CDS CM001794.1 729720 731690 3 + 1971 Acylamino-acid-releasing enzyme (EC 3.4.19.1) Omega peptidases (EC 3.4.19.-)
fig|6666666.229868.peg.421 CDS CM001794.1 732966 731680 -3 - 1287 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229868.peg.422 CDS CM001794.1 733100 733819 2 + 720 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.229868.peg.423 CDS CM001794.1 734414 733890 -2 - 525 hypothetical protein - none -
fig|6666666.229868.peg.424 CDS CM001794.1 735888 734554 -3 - 1335 NADH peroxidase (EC 1.11.1.1) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.229868.peg.425 CDS CM001794.1 736212 736069 -3 - 144 hypothetical protein - none -
fig|6666666.229868.peg.426 CDS CM001794.1 737354 736383 -2 - 972 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229868.peg.427 CDS CM001794.1 737406 738884 3 + 1479 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229868.peg.428 CDS CM001794.1 738929 739471 2 + 543 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229868.peg.429 CDS CM001794.1 739455 740117 3 + 663 hypothetical protein - none -
fig|6666666.229868.peg.430 CDS CM001794.1 740107 741786 1 + 1680 transglutaminase domain protein - none -
fig|6666666.229868.peg.431 CDS CM001794.1 743263 741821 -1 - 1443 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229868.peg.432 CDS CM001794.1 744671 743271 -2 - 1401 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229868.peg.433 CDS CM001794.1 744784 747621 1 + 2838 T. pallidum predicted coding region TP0900 - none -
fig|6666666.229868.peg.434 CDS CM001794.1 747647 751066 2 + 3420 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229868.peg.435 CDS CM001794.1 751207 752991 1 + 1785 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) - none -
fig|6666666.229868.peg.436 CDS CM001794.1 752978 754408 2 + 1431 GTP-binding protein EngA Universal GTPases
fig|6666666.229868.peg.437 CDS CM001794.1 754411 754737 1 + 327 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229868.peg.438 CDS CM001794.1 754721 756109 2 + 1389 hypothetical protein - none -
fig|6666666.229868.peg.439 CDS CM001794.1 756450 757934 3 + 1485 Betaine aldehyde dehydrogenase (EC 1.2.1.8) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229868.peg.440 CDS CM001794.1 757959 758567 3 + 609 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.442 CDS CM001794.1 758586 759917 3 + 1332 Betaine reductase component B beta subunit (EC 1.21.4.4) @ selenocysteine-containing Glycine reductase, sarcosine reductase and betaine reductase
fig|6666666.229868.peg.444 CDS CM001794.1 759921 761240 3 + 1320 Betaine reductase component B alpha subunit (EC 1.21.4.4) Glycine reductase, sarcosine reductase and betaine reductase
fig|6666666.229868.peg.445 CDS CM001794.1 761291 762073 2 + 783 COG1830: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes - none -
fig|6666666.229868.peg.446 CDS CM001794.1 762089 763135 2 + 1047 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229868.peg.447 CDS CM001794.1 763163 764506 2 + 1344 amino acid permease family protein - none -
fig|6666666.229868.peg.448 CDS CM001794.1 764580 765503 3 + 924 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229868.peg.449 CDS CM001794.1 767691 765553 -3 - 2139 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.450 CDS CM001794.1 770016 767770 -3 - 2247 peptidase, U32 family - none -
fig|6666666.229868.peg.451 CDS CM001794.1 770906 770079 -2 - 828 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Flagellum;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229868.peg.452 CDS CM001794.1 772068 771052 -3 - 1017 Lysine 2,3-aminomutase (EC 5.4.3.2) - none -
fig|6666666.229868.peg.453 CDS CM001794.1 773322 772087 -3 - 1236 peptidase, M20/M25/M40 family - none -
fig|6666666.229868.peg.454 CDS CM001794.1 773481 774728 3 + 1248 cyclic nucleotide-binding protein - none -
fig|6666666.229868.peg.455 CDS CM001794.1 774743 775333 2 + 591 hypothetical protein - none -
fig|6666666.229868.peg.456 CDS CM001794.1 775323 775847 3 + 525 hypothetical protein - none -
fig|6666666.229868.peg.457 CDS CM001794.1 776018 777334 2 + 1317 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, alpha subunit (EC 2.7.1.90) Glycolysis and Gluconeogenesis
fig|6666666.229868.peg.458 CDS CM001794.1 778925 777390 -2 - 1536 B. burgdorferi predicted coding region BB0351 - none -
fig|6666666.229868.peg.459 CDS CM001794.1 779549 779058 -2 - 492 PTS system, IIA component - none -
fig|6666666.229868.peg.460 CDS CM001794.1 779745 780791 3 + 1047 fic family protein - none -
fig|6666666.229868.peg.461 CDS CM001794.1 780851 781165 2 + 315 hypothetical protein - none -
fig|6666666.229868.peg.462 CDS CM001794.1 781442 781624 2 + 183 hypothetical protein - none -
fig|6666666.229868.peg.463 CDS CM001794.1 782339 781659 -2 - 681 hypothetical protein - none -
fig|6666666.229868.peg.464 CDS CM001794.1 783508 782534 -1 - 975 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229868.peg.465 CDS CM001794.1 783749 783543 -2 - 207 DNA-directed RNA polymerase - none -
fig|6666666.229868.peg.466 CDS CM001794.1 785890 783794 -1 - 2097 Flagellar biosynthesis protein FlhA Flagellar motility;
Flagellum
fig|6666666.229868.peg.467 CDS CM001794.1 787071 785899 -3 - 1173 Flagellar biosynthesis protein FlhB Flagellar motility;
Flagellum
fig|6666666.229868.peg.468 CDS CM001794.1 787862 787068 -2 - 795 Flagellar biosynthesis protein FliR Flagellar motility;
Flagellum
fig|6666666.229868.peg.469 CDS CM001794.1 788150 787881 -2 - 270 Flagellar biosynthesis protein FliQ Flagellum
fig|6666666.229868.peg.470 CDS CM001794.1 788197 789432 1 + 1236 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229868.peg.471 CDS CM001794.1 789434 790222 2 + 789 tRNA (guanosine(18)-2@1-O)-methyltransferase (EC 2.1.1.34) RNA methylation;
tRNA modification Bacteria
fig|6666666.229868.peg.472 CDS CM001794.1 790486 791121 1 + 636 hypothetical protein - none -
fig|6666666.229868.peg.473 CDS CM001794.1 791147 792388 2 + 1242 Imidazolonepropionase (EC 3.5.2.7) Histidine Degradation
fig|6666666.229868.peg.474 CDS CM001794.1 792457 793098 1 + 642 Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229868.peg.475 CDS CM001794.1 793207 795051 1 + 1845 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.476 CDS CM001794.1 795153 795040 -3 - 114 hypothetical protein - none -
fig|6666666.229868.peg.477 CDS CM001794.1 796999 795116 -1 - 1884 TPR domain protein, putative component of TonB system Ton and Tol transport systems
fig|6666666.229868.peg.478 CDS CM001794.1 798011 797004 -2 - 1008 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229868.peg.479 CDS CM001794.1 799211 798132 -2 - 1080 Biotin-protein ligase (EC 6.3.4.15) / Biotin operon repressor Biotin biosynthesis;
Biotin biosynthesis
fig|6666666.229868.peg.480 CDS CM001794.1 799347 800999 3 + 1653 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - none -
fig|6666666.229868.peg.481 CDS CM001794.1 801117 802352 3 + 1236 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) - none -
fig|6666666.229868.peg.482 CDS CM001794.1 802467 802745 3 + 279 hypothetical protein - none -
fig|6666666.229868.peg.483 CDS CM001794.1 803059 803307 1 + 249 Transcriptional regulator, AbrB family - none -
fig|6666666.229868.peg.484 CDS CM001794.1 803304 803723 3 + 420 hypothetical protein - none -
fig|6666666.229868.peg.485 CDS CM001794.1 803908 804279 1 + 372 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.486 CDS CM001794.1 804409 805146 1 + 738 hypothetical protein - none -
fig|6666666.229868.peg.487 CDS CM001794.1 805163 805882 2 + 720 Two-component response regulator - none -
fig|6666666.229868.peg.488 CDS CM001794.1 805882 806628 1 + 747 ATP-binding region, ATPase-like - none -
fig|6666666.229868.peg.489 CDS CM001794.1 806763 807023 3 + 261 hypothetical protein - none -
fig|6666666.229868.peg.490 CDS CM001794.1 807151 807912 1 + 762 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229868.peg.491 CDS CM001794.1 808063 807875 -1 - 189 hypothetical protein - none -
fig|6666666.229868.peg.492 CDS CM001794.1 808119 809900 3 + 1782 Export ABC transporter - none -
fig|6666666.229868.peg.493 CDS CM001794.1 809911 811785 1 + 1875 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229868.peg.494 CDS CM001794.1 811850 812833 2 + 984 Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase) Potassium homeostasis
fig|6666666.229868.peg.495 CDS CM001794.1 812820 814010 3 + 1191 Pheromone shutdown protein - none -
fig|6666666.229868.peg.496 CDS CM001794.1 814397 814735 2 + 339 hypothetical protein - none -
fig|6666666.229868.peg.497 CDS CM001794.1 814744 816417 1 + 1674 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.229868.peg.498 CDS CM001794.1 816417 817313 3 + 897 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.499 CDS CM001794.1 817881 817345 -3 - 537 hypothetical protein - none -
fig|6666666.229868.peg.500 CDS CM001794.1 818936 817971 -2 - 966 sn-1,2-diacylglycerol cholinephosphotransferase, putative - none -
fig|6666666.229868.peg.501 CDS CM001794.1 820340 818985 -2 - 1356 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229868.peg.502 CDS CM001794.1 820468 822171 1 + 1704 Formate--tetrahydrofolate ligase (EC 6.3.4.3) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229868.peg.503 CDS CM001794.1 822263 822763 2 + 501 LysM domain protein - none -
fig|6666666.229868.peg.504 CDS CM001794.1 822900 823928 3 + 1029 Deblocking aminopeptidase (EC 3.4.11.-) Protein degradation
fig|6666666.229868.peg.505 CDS CM001794.1 825329 824004 -2 - 1326 ATPase, AAA family - none -
fig|6666666.229868.peg.506 CDS CM001794.1 826350 825322 -3 - 1029 lipoprotein, putative - none -
fig|6666666.229868.peg.507 CDS CM001794.1 826987 826370 -1 - 618 T. pallidum predicted coding region TP0733 - none -
fig|6666666.229868.peg.508 CDS CM001794.1 827188 828069 1 + 882 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines
fig|6666666.229868.peg.509 CDS CM001794.1 829609 828155 -1 - 1455 Carbon starvation protein A Carbon Starvation
fig|6666666.229868.peg.510 CDS CM001794.1 830369 829722 -2 - 648 Probable peroxiredoxin (EC 1.11.1.15) Oxidative stress;
Rubrerythrin
fig|6666666.229868.peg.511 CDS CM001794.1 831002 830631 -2 - 372 ADP-ribose pyrophosphatase (EC 3.6.1.13) NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229868.peg.512 CDS CM001794.1 830962 831252 1 + 291 hypothetical protein - none -
fig|6666666.229868.peg.513 CDS CM001794.1 831282 832103 3 + 822 pyrimidine-ribonucleotide metabolism - none -
fig|6666666.229868.peg.514 CDS CM001794.1 834885 832210 -3 - 2676 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229868.peg.515 CDS CM001794.1 835962 835048 -3 - 915 Transposase - none -
fig|6666666.229868.peg.516 CDS CM001794.1 836126 839776 2 + 3651 Helicase, SNF2/RAD54 family - none -
fig|6666666.229868.peg.517 CDS CM001794.1 839834 840889 2 + 1056 Low-specificity L-threonine aldolase (EC 4.1.2.48) - none -
fig|6666666.229868.peg.518 CDS CM001794.1 841581 840907 -3 - 675 membrane protein, putative - none -
fig|6666666.229868.peg.519 CDS CM001794.1 842341 841622 -1 - 720 membrane protein, putative - none -
fig|6666666.229868.peg.520 CDS CM001794.1 844280 842364 -2 - 1917 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229868.peg.521 CDS CM001794.1 844389 845798 3 + 1410 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229868.peg.522 CDS CM001794.1 846258 845803 -3 - 456 hypothetical protein - none -
fig|6666666.229868.peg.523 CDS CM001794.1 846435 846307 -3 - 129 hypothetical protein - none -
fig|6666666.229868.peg.524 CDS CM001794.1 846403 849852 1 + 3450 DNA polymerase III alpha subunit (EC 2.7.7.7) Phage replication
fig|6666666.229868.peg.525 CDS CM001794.1 849893 850474 2 + 582 membrane protein, putative - none -
fig|6666666.229868.peg.526 CDS CM001794.1 852187 850478 -1 - 1710 hypothetical protein - none -
fig|6666666.229868.peg.527 CDS CM001794.1 854615 852498 -2 - 2118 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.528 CDS CM001794.1 854799 856589 3 + 1791 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.529 CDS CM001794.1 856607 858436 2 + 1830 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.530 CDS CM001794.1 858503 859447 2 + 945 hypothetical protein - none -
fig|6666666.229868.peg.531 CDS CM001794.1 859471 859704 1 + 234 PspC domain protein, truncated - none -
fig|6666666.229868.peg.532 CDS CM001794.1 860713 859754 -1 - 960 hypothetical protein - none -
fig|6666666.229868.peg.533 CDS CM001794.1 861661 860720 -1 - 942 Proline iminopeptidase (EC 3.4.11.5) - none -
fig|6666666.229868.peg.534 CDS CM001794.1 862829 861975 -2 - 855 Uncharacterized secreted protein associated with spyDAC Bacterial checkpoint-control-related cluster
fig|6666666.229868.peg.535 CDS CM001794.1 863036 864409 2 + 1374 Flagellar hook-length control protein FliK Flagellum
fig|6666666.229868.peg.536 CDS CM001794.1 864421 864930 1 + 510 Flagellar basal-body rod modification protein FlgD Flagellar motility;
Flagellum
fig|6666666.229868.peg.537 CDS CM001794.1 864943 866334 1 + 1392 Flagellar hook protein FlgE Flagellum
fig|6666666.229868.peg.538 CDS CM001794.1 866360 866557 2 + 198 Flagellar protein FlbD Flagellum
fig|6666666.229868.peg.539 CDS CM001794.1 866579 867358 2 + 780 Flagellar motor rotation protein MotA Flagellar motility;
Flagellum
fig|6666666.229868.peg.540 CDS CM001794.1 867360 868079 3 + 720 Flagellar motor rotation protein MotB Flagellar motility;
Flagellum
fig|6666666.229868.peg.541 CDS CM001794.1 868122 868667 3 + 546 Flagellar biosynthesis protein FliL Flagellum
fig|6666666.229868.peg.542 CDS CM001794.1 868682 869716 2 + 1035 Flagellar motor switch protein FliM Flagellar motility;
Flagellum
fig|6666666.229868.peg.543 CDS CM001794.1 869709 870890 3 + 1182 Flagellar motor switch protein FliN Flagellar motility;
Flagellum
fig|6666666.229868.peg.544 CDS CM001794.1 870916 871575 1 + 660 Flagellar biosynthesis protein FliZ Flagellum
fig|6666666.229868.peg.545 CDS CM001794.1 871572 872387 3 + 816 Flagellar biosynthesis protein FliP Flagellum
fig|6666666.229868.peg.546 CDS CM001794.1 873093 872434 -3 - 660 hypothetical protein - none -
fig|6666666.229868.peg.547 CDS CM001794.1 873439 873059 -1 - 381 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229868.peg.548 CDS CM001794.1 873731 873423 -2 - 309 nucleotidyltransferase - none -
fig|6666666.229868.peg.549 CDS CM001794.1 873937 875556 1 + 1620 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.550 CDS CM001794.1 875687 876703 2 + 1017 Ornithine cyclodeaminase (EC 4.3.1.12) Arginine and Ornithine Degradation
fig|6666666.229868.peg.551 CDS CM001794.1 876912 877886 3 + 975 LysM domain/M23/M37 peptidase domain protein - none -
fig|6666666.229868.peg.552 CDS CM001794.1 878276 878004 -2 - 273 hypothetical protein - none -
fig|6666666.229868.peg.553 CDS CM001794.1 879992 878280 -2 - 1713 hypothetical protein - none -
fig|6666666.229868.peg.554 CDS CM001794.1 881361 880186 -3 - 1176 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229868.peg.555 CDS CM001794.1 881828 881382 -2 - 447 Uncharacterized protein MJ1680 - none -
fig|6666666.229868.peg.556 CDS CM001794.1 881961 881797 -3 - 165 hypothetical protein - none -
fig|6666666.229868.peg.557 CDS CM001794.1 882663 882205 -3 - 459 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.558 CDS CM001794.1 882871 886245 1 + 3375 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229868.peg.559 CDS CM001794.1 886260 887690 3 + 1431 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229868.peg.560 CDS CM001794.1 887687 888502 2 + 816 fic family protein - none -
fig|6666666.229868.peg.561 CDS CM001794.1 888530 890110 2 + 1581 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229868.peg.562 CDS CM001794.1 890680 890081 -1 - 600 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229868.peg.563 CDS CM001794.1 890741 891550 2 + 810 Integrase/recombinase (XerC/CodV family) - none -
fig|6666666.229868.peg.564 CDS CM001794.1 892320 891814 -3 - 507 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229868.peg.565 CDS CM001794.1 892861 892445 -1 - 417 Bacterial/Archaeal Transporter family protein - none -
fig|6666666.229868.peg.566 CDS CM001794.1 894771 893041 -3 - 1731 Oligoendopeptidase F (EC 3.4.24.-) - none -
fig|6666666.229868.peg.567 CDS CM001794.1 895827 894823 -3 - 1005 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229868.peg.568 CDS CM001794.1 896604 895831 -3 - 774 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229868.peg.569 CDS CM001794.1 896783 897484 2 + 702 membrane protein, putative - none -
fig|6666666.229868.peg.570 CDS CM001794.1 897894 898988 3 + 1095 Probable GTPase related to EngC Universal GTPases
fig|6666666.229868.peg.571 CDS CM001794.1 899070 900038 3 + 969 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) - none -
fig|6666666.229868.peg.572 CDS CM001794.1 900031 900999 1 + 969 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) - none -
fig|6666666.229868.peg.573 CDS CM001794.1 901142 900987 -2 - 156 hypothetical protein - none -
fig|6666666.229868.peg.574 CDS CM001794.1 901112 902368 2 + 1257 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway
fig|6666666.229868.peg.575 CDS CM001794.1 902365 903573 1 + 1209 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229868.peg.576 CDS CM001794.1 903647 905419 2 + 1773 helicase domain protein - none -
fig|6666666.229868.peg.577 CDS CM001794.1 905420 906283 2 + 864 FIG01186969: hypothetical protein - none -
fig|6666666.229868.peg.578 CDS CM001794.1 907222 906332 -1 - 891 Transposase - none -
fig|6666666.229868.peg.579 CDS CM001794.1 907406 908764 2 + 1359 Mg/Co/Ni transporter MgtE / CBS domain Magnesium transport
fig|6666666.229868.peg.580 CDS CM001794.1 908769 909395 3 + 627 phytol kinase - none -
fig|6666666.229868.peg.581 CDS CM001794.1 910071 909415 -3 - 657 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229868.peg.582 CDS CM001794.1 910402 910905 1 + 504 hypothetical protein - none -
fig|6666666.229868.peg.583 CDS CM001794.1 910930 913182 1 + 2253 serine/threonine protein kinase - none -
fig|6666666.229868.peg.584 CDS CM001794.1 913318 913145 -1 - 174 hypothetical protein - none -
fig|6666666.229868.peg.585 CDS CM001794.1 913485 914252 3 + 768 23S rRNA methyltransferase (EC 2.1.1.-) - none -
fig|6666666.229868.peg.586 CDS CM001794.1 914751 914224 -3 - 528 conserved hypothetical protein - none -
fig|6666666.229868.peg.587 CDS CM001794.1 915675 914848 -3 - 828 Signal transduction histidine kinase - none -
fig|6666666.229868.peg.588 CDS CM001794.1 917166 915802 -3 - 1365 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog Multidrug Resistance Efflux Pumps
fig|6666666.229868.peg.589 CDS CM001794.1 917388 922052 3 + 4665 fibronectin type III domain protein - none -
fig|6666666.229868.peg.590 CDS CM001794.1 922074 928520 3 + 6447 hypothetical protein - none -
fig|6666666.229868.peg.591 CDS CM001794.1 929644 928742 -1 - 903 Transposase - none -
fig|6666666.229868.peg.592 CDS CM001794.1 929828 931726 2 + 1899 melibiose carrier protein - none -
fig|6666666.229868.peg.593 CDS CM001794.1 931880 932518 2 + 639 Mobile element protein - none -
fig|6666666.229868.peg.594 CDS CM001794.1 932566 935262 1 + 2697 membrane protein, putative - none -
fig|6666666.229868.peg.595 CDS CM001794.1 935255 936040 2 + 786 Outer membrane lipoprotein-sorting protein - none -
fig|6666666.229868.peg.596 CDS CM001794.1 936067 937809 1 + 1743 hypothetical protein - none -
fig|6666666.229868.peg.597 CDS CM001794.1 938853 937906 -3 - 948 Malate Na(+) symporter Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229868.peg.598 CDS CM001794.1 939208 938846 -1 - 363 Malate Na(+) symporter Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229868.peg.599 CDS CM001794.1 940888 939221 -1 - 1668 TolA protein Ton and Tol transport systems
fig|6666666.229868.peg.600 CDS CM001794.1 942552 940909 -3 - 1644 hypothetical protein - none -
fig|6666666.229868.peg.601 CDS CM001794.1 943344 942571 -3 - 774 3-oxo-5-alpha-steroid 4-dehydrogenase - none -
fig|6666666.229868.peg.602 CDS CM001794.1 943617 944555 3 + 939 TPR domain protein - none -
fig|6666666.229868.peg.603 CDS CM001794.1 944574 947279 3 + 2706 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229868.peg.604 CDS CM001794.1 947353 949461 1 + 2109 PE_PGRS family protein - none -
fig|6666666.229868.peg.605 CDS CM001794.1 952355 949554 -2 - 2802 ankyrin repeat protein - none -
fig|6666666.229868.peg.606 CDS CM001794.1 954067 952457 -1 - 1611 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229868.peg.607 CDS CM001794.1 954829 955071 1 + 243 hypothetical protein - none -
fig|6666666.229868.peg.608 CDS CM001794.1 955096 956187 1 + 1092 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis
fig|6666666.229868.peg.609 CDS CM001794.1 956258 957598 2 + 1341 Flagellar biosynthesis protein FlhF Flagellar motility;
Flagellum
fig|6666666.229868.peg.610 CDS CM001794.1 957600 958493 3 + 894 Flagellar synthesis regulator FleN Flagellar motility;
Flagellum
fig|6666666.229868.peg.611 CDS CM001794.1 958535 959203 2 + 669 hypothetical protein - none -
fig|6666666.229868.peg.612 CDS CM001794.1 959228 960016 2 + 789 RNA polymerase sigma factor SigB SigmaB stress responce regulation;
Transcription initiation, bacterial sigma factors
fig|6666666.229868.peg.613 CDS CM001794.1 960025 961995 1 + 1971 FIG00764930: hypothetical protein - none -
fig|6666666.229868.peg.614 CDS CM001794.1 961976 962314 2 + 339 FIG01186900: hypothetical protein - none -
fig|6666666.229868.peg.615 CDS CM001794.1 962311 962934 1 + 624 hypothetical protein - none -
fig|6666666.229868.peg.616 CDS CM001794.1 963815 962931 -2 - 885 hypothetical protein - none -
fig|6666666.229868.peg.617 CDS CM001794.1 964618 964884 1 + 267 Transposase - none -
fig|6666666.229868.peg.618 CDS CM001794.1 964921 965043 1 + 123 hypothetical protein - none -
fig|6666666.229868.peg.619 CDS CM001794.1 965027 968605 2 + 3579 Alpha-amylase family protein - none -
fig|6666666.229868.peg.620 CDS CM001794.1 968736 968602 -3 - 135 hypothetical protein - none -
fig|6666666.229868.peg.621 CDS CM001794.1 970058 968742 -2 - 1317 Threonine synthase (EC 4.2.3.1) - none -
fig|6666666.229868.peg.622 CDS CM001794.1 970912 970079 -1 - 834 hypothetical protein - none -
fig|6666666.229868.peg.623 CDS CM001794.1 971116 971928 1 + 813 hypothetical protein - none -
fig|6666666.229868.peg.624 CDS CM001794.1 972016 972723 1 + 708 hypothetical protein - none -
fig|6666666.229868.peg.625 CDS CM001794.1 974133 972793 -3 - 1341 TPR domain-containing protein - none -
fig|6666666.229868.peg.626 CDS CM001794.1 974442 976253 3 + 1812 hypothetical protein - none -
fig|6666666.229868.peg.627 CDS CM001794.1 976362 977429 3 + 1068 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229868.peg.628 CDS CM001794.1 977453 978235 2 + 783 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229868.peg.629 CDS CM001794.1 978330 979850 3 + 1521 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine Biosynthesis
fig|6666666.229868.peg.630 CDS CM001794.1 980003 980734 2 + 732 hydrolase, carbon-nitrogen family - none -
fig|6666666.229868.peg.631 CDS CM001794.1 982330 980816 -1 - 1515 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.229868.peg.632 CDS CM001794.1 982479 985781 3 + 3303 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229868.peg.633 CDS CM001794.1 985765 986610 1 + 846 lipoprotein, putative - none -
fig|6666666.229868.peg.634 CDS CM001794.1 986625 986873 3 + 249 conserved hypothetical protein - none -
fig|6666666.229868.peg.635 CDS CM001794.1 986880 987239 3 + 360 hypothetical protein - none -
fig|6666666.229868.peg.636 CDS CM001794.1 988497 987244 -3 - 1254 GAF domain/HD domain protein - none -
fig|6666666.229868.peg.637 CDS CM001794.1 989853 988564 -3 - 1290 Cobyrinic acid A,C-diamide synthase Cobalamin synthesis
fig|6666666.229868.peg.638 CDS CM001794.1 990525 989857 -3 - 669 Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Cobalamin synthesis
fig|6666666.229868.peg.639 CDS CM001794.1 991282 990527 -1 - 756 Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Cobalamin synthesis
fig|6666666.229868.peg.640 CDS CM001794.1 992672 991428 -2 - 1245 macrolide efflux protein, putative - none -
fig|6666666.229868.peg.641 CDS CM001794.1 993456 992683 -3 - 774 membrane protein, putative - none -
fig|6666666.229868.peg.642 CDS CM001794.1 994212 993457 -3 - 756 membrane protein, putative - none -
fig|6666666.229868.peg.643 CDS CM001794.1 995198 994209 -2 - 990 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.644 CDS CM001794.1 995366 995731 2 + 366 Transcriptional regulator, GntR family - none -
fig|6666666.229868.peg.645 CDS CM001794.1 995749 996618 1 + 870 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.646 CDS CM001794.1 996620 997315 2 + 696 hypothetical protein - none -
fig|6666666.229868.peg.647 CDS CM001794.1 997422 999122 3 + 1701 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.648 CDS CM001794.1 999192 1000187 3 + 996 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229868.peg.649 CDS CM001794.1 1000792 1000190 -1 - 603 Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB Alkanesulfonates Utilization
fig|6666666.229868.peg.650 CDS CM001794.1 1001168 1000776 -2 - 393 hypothetical protein - none -
fig|6666666.229868.peg.651 CDS CM001794.1 1002489 1001161 -3 - 1329 Sarcosine oxidase alpha subunit (EC 1.5.3.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229868.peg.652 CDS CM001794.1 1003955 1002486 -2 - 1470 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229868.peg.653 CDS CM001794.1 1003945 1004079 1 + 135 hypothetical protein - none -
fig|6666666.229868.peg.654 CDS CM001794.1 1005195 1004194 -3 - 1002 Fic family protein - none -
fig|6666666.229868.peg.655 CDS CM001794.1 1006157 1005240 -2 - 918 hypothetical protein - none -
fig|6666666.229868.peg.656 CDS CM001794.1 1008018 1006180 -3 - 1839 Oligoendopeptidase F (EC 3.4.24.-) - none -
fig|6666666.229868.peg.657 CDS CM001794.1 1008753 1008070 -3 - 684 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.229868.peg.658 CDS CM001794.1 1009040 1009441 2 + 402 hypothetical protein - none -
fig|6666666.229868.peg.659 CDS CM001794.1 1010120 1009521 -2 - 600 hypothetical protein - none -
fig|6666666.229868.peg.660 CDS CM001794.1 1010740 1010237 -1 - 504 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.661 CDS CM001794.1 1011568 1010762 -1 - 807 METHYLTRANSFERASE - none -
fig|6666666.229868.peg.662 CDS CM001794.1 1011834 1011571 -3 - 264 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.229868.peg.663 CDS CM001794.1 1013540 1011849 -2 - 1692 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.229868.peg.664 CDS CM001794.1 1014361 1013537 -1 - 825 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.665 CDS CM001794.1 1015311 1014358 -3 - 954 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.229868.peg.666 CDS CM001794.1 1016774 1015308 -2 - 1467 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.667 CDS CM001794.1 1017100 1017708 1 + 609 transcriptional regulator, TetR family - none -
fig|6666666.229868.peg.668 CDS CM001794.1 1017840 1019585 3 + 1746 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229868.peg.669 CDS CM001794.1 1019578 1021317 1 + 1740 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229868.peg.670 CDS CM001794.1 1021337 1021921 2 + 585 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.671 CDS CM001794.1 1022041 1022658 1 + 618 Transmembrane component BL0694 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.672 CDS CM001794.1 1022652 1024064 3 + 1413 Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.673 CDS CM001794.1 1024458 1024075 -3 - 384 Possible glyoxylase family protein (Lactoylglutathione lyase) (EC 4.4.1.5) - none -
fig|6666666.229868.peg.674 CDS CM001794.1 1025756 1024488 -2 - 1269 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) RNA methylation;
tRNA modification Bacteria
fig|6666666.229868.peg.675 CDS CM001794.1 1026644 1025769 -2 - 876 COG0613, Predicted metal-dependent phosphoesterases (PHP family) CBSS-314276.3.peg.1499;
tRNA modification Bacteria
fig|6666666.229868.peg.676 CDS CM001794.1 1026742 1027743 1 + 1002 cyclic nucleotide-binding protein - none -
fig|6666666.229868.peg.677 CDS CM001794.1 1027747 1028406 1 + 660 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.229868.peg.678 CDS CM001794.1 1028419 1028940 1 + 522 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229868.peg.679 CDS CM001794.1 1028953 1030068 1 + 1116 Hypothetical similar to thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229868.peg.680 CDS CM001794.1 1030664 1030260 -2 - 405 hypothetical protein - none -
fig|6666666.229868.peg.681 CDS CM001794.1 1031829 1030657 -3 - 1173 Mll3043 protein - none -
fig|6666666.229868.peg.682 CDS CM001794.1 1034056 1031837 -1 - 2220 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.229868.peg.683 CDS CM001794.1 1035636 1034212 -3 - 1425 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229868.peg.684 CDS CM001794.1 1036761 1035643 -3 - 1119 Transcriptional regulator - none -
fig|6666666.229868.peg.685 CDS CM001794.1 1037450 1036782 -2 - 669 B. burgdorferi predicted coding region BB0346 - none -
fig|6666666.229868.peg.686 CDS CM001794.1 1039597 1037573 -1 - 2025 Urocanate hydratase (EC 4.2.1.49) Histidine Degradation
fig|6666666.229868.peg.687 CDS CM001794.1 1040226 1039684 -3 - 543 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229868.peg.688 CDS CM001794.1 1040413 1041870 1 + 1458 Peptidase, S41 family - none -
fig|6666666.229868.peg.689 CDS CM001794.1 1044568 1041893 -1 - 2676 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229868.peg.690 CDS CM001794.1 1045088 1044561 -2 - 528 Outer membrane protein H precursor Periplasmic Stress Response
fig|6666666.229868.peg.691 CDS CM001794.1 1047587 1045098 -2 - 2490 Outer membrane protein assembly factor YaeT precursor - none -
fig|6666666.229868.peg.692 CDS CM001794.1 1052086 1047569 -1 - 4518 ortholog to Borrelia burgdorferi BB0794 - none -
fig|6666666.229868.peg.693 CDS CM001794.1 1052119 1052760 1 + 642 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229868.peg.694 CDS CM001794.1 1052764 1053375 1 + 612 FIG01187135: hypothetical protein - none -
fig|6666666.229868.peg.695 CDS CM001794.1 1053420 1054058 3 + 639 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway
fig|6666666.229868.peg.696 CDS CM001794.1 1054055 1055017 2 + 963 hypothetical protein - none -
fig|6666666.229868.peg.697 CDS CM001794.1 1055014 1056060 1 + 1047 hypothetical protein - none -
fig|6666666.229868.peg.698 CDS CM001794.1 1056064 1057164 1 + 1101 hypothetical protein - none -
fig|6666666.229868.peg.699 CDS CM001794.1 1058297 1057161 -2 - 1137 Response regulator of zinc sigma-54-dependent two-component system Zinc resistance
fig|6666666.229868.peg.700 CDS CM001794.1 1059018 1058392 -3 - 627 Uncharacterized protein TP_1029 - none -
fig|6666666.229868.peg.701 CDS CM001794.1 1059510 1059115 -3 - 396 rhodanese-like domain protein - none -
fig|6666666.229868.peg.702 CDS CM001794.1 1059688 1061094 1 + 1407 Probable M18-family aminopeptidase 1 (EC 3.4.11.-) - none -
fig|6666666.229868.peg.703 CDS CM001794.1 1061254 1061132 -1 - 123 hypothetical protein - none -
fig|6666666.229868.peg.704 CDS CM001794.1 1062490 1061471 -1 - 1020 endonuclease/exonuclease/phosphatase family protein - none -
fig|6666666.229868.peg.705 CDS CM001794.1 1062435 1062548 3 + 114 hypothetical protein - none -
fig|6666666.229868.peg.706 CDS CM001794.1 1062642 1064480 3 + 1839 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229868.peg.707 CDS CM001794.1 1064440 1066755 1 + 2316 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.708 CDS CM001794.1 1068268 1066817 -1 - 1452 Dipeptidase (EC 3.4.-.-) - none -
fig|6666666.229868.peg.709 CDS CM001794.1 1073849 1068597 -2 - 5253 GGDEF domain protein - none -
fig|6666666.229868.peg.710 CDS CM001794.1 1079237 1073913 -2 - 5325 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor - none -
fig|6666666.229868.peg.711 CDS CM001794.1 1079359 1081395 1 + 2037 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229868.peg.712 CDS CM001794.1 1081529 1081783 2 + 255 hypothetical protein - none -
fig|6666666.229868.peg.713 CDS CM001794.1 1081780 1082193 1 + 414 PIN domain protein - none -
fig|6666666.229868.peg.714 CDS CM001794.1 1083970 1082420 -1 - 1551 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.715 CDS CM001794.1 1084987 1084253 -1 - 735 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229868.peg.716 CDS CM001794.1 1085641 1085027 -1 - 615 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.717 CDS CM001794.1 1086283 1085645 -1 - 639 GTP-binding protein EngB Universal GTPases
fig|6666666.229868.peg.718 CDS CM001794.1 1087905 1086280 -3 - 1626 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229868.peg.719 CDS CM001794.1 1089512 1087920 -2 - 1593 FIG01186987: hypothetical protein - none -
fig|6666666.229868.peg.720 CDS CM001794.1 1089629 1090222 2 + 594 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229868.peg.721 CDS CM001794.1 1090215 1090445 3 + 231 bacterial seryl-tRNA synthetase related - none -
fig|6666666.229868.peg.722 CDS CM001794.1 1090942 1090460 -1 - 483 Ribonuclease HI (EC 3.1.26.4) Ribonuclease H
fig|6666666.229868.peg.723 CDS CM001794.1 1092009 1090939 -3 - 1071 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229868.peg.724 CDS CM001794.1 1093175 1092012 -2 - 1164 tRNA S(4)U 4-thiouridine synthase (former ThiI) Thiamin biosynthesis;
tRNA modification Bacteria
fig|6666666.229868.peg.725 CDS CM001794.1 1093291 1094169 1 + 879 hypothetical protein - none -
fig|6666666.229868.peg.726 CDS CM001794.1 1094180 1097035 2 + 2856 hypothetical protein - none -
fig|6666666.229868.peg.727 CDS CM001794.1 1097094 1097975 3 + 882 hypothetical protein - none -
fig|6666666.229868.peg.728 CDS CM001794.1 1098282 1098004 -3 - 279 Programmed cell death toxin YdcE MazEF toxin-antitoxing (programmed cell death) system;
Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.229868.peg.729 CDS CM001794.1 1098523 1098329 -1 - 195 Programmed cell death antitoxin YdcD MazEF toxin-antitoxing (programmed cell death) system;
Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.229868.peg.730 CDS CM001794.1 1099419 1098610 -3 - 810 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229868.peg.731 CDS CM001794.1 1100104 1099421 -1 - 684 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229868.peg.732 CDS CM001794.1 1100857 1100159 -1 - 699 hypothetical protein - none -
fig|6666666.229868.peg.733 CDS CM001794.1 1101164 1102948 2 + 1785 probable ABC transporter - none -
fig|6666666.229868.peg.734 CDS CM001794.1 1102945 1104603 1 + 1659 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.735 CDS CM001794.1 1105165 1106022 1 + 858 Signal transduction histidine kinase - none -
fig|6666666.229868.peg.736 CDS CM001794.1 1106682 1106059 -3 - 624 Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Cobalamin synthesis
fig|6666666.229868.peg.737 CDS CM001794.1 1107646 1106672 -1 - 975 chaperonin, 33 kDa family - none -
fig|6666666.229868.peg.738 CDS CM001794.1 1107711 1109297 3 + 1587 Lysyl-tRNA synthetase (class I) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229868.peg.739 CDS CM001794.1 1109400 1110974 3 + 1575 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.740 CDS CM001794.1 1111056 1112132 3 + 1077 hypothetical protein - none -
fig|6666666.229868.peg.741 CDS CM001794.1 1112129 1112824 2 + 696 metal-dependent hydrolase-like - none -
fig|6666666.229868.peg.742 CDS CM001794.1 1115006 1112910 -2 - 2097 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.743 CDS CM001794.1 1115353 1115240 -1 - 114 hypothetical protein - none -
fig|6666666.229868.peg.744 CDS CM001794.1 1115670 1116554 3 + 885 hypothetical protein BH3604 - none -
fig|6666666.229868.peg.745 CDS CM001794.1 1116650 1117261 2 + 612 hypothetical protein - none -
fig|6666666.229868.peg.746 CDS CM001794.1 1117605 1118975 3 + 1371 antigen, putative - none -
fig|6666666.229868.peg.747 CDS CM001794.1 1120317 1119256 -3 - 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229868.peg.748 CDS CM001794.1 1120441 1120322 -1 - 120 hypothetical protein - none -
fig|6666666.229868.peg.749 CDS CM001794.1 1120433 1123225 2 + 2793 hypothetical protein - none -
fig|6666666.229868.peg.750 CDS CM001794.1 1123262 1124146 2 + 885 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.229868.peg.751 CDS CM001794.1 1124585 1124178 -2 - 408 hypothetical protein - none -
fig|6666666.229868.peg.752 CDS CM001794.1 1125104 1124592 -2 - 513 hypothetical protein - none -
fig|6666666.229868.peg.753 CDS CM001794.1 1126050 1125109 -3 - 942 protein of unknown function DUF88 - none -
fig|6666666.229868.peg.754 CDS CM001794.1 1127478 1126063 -3 - 1416 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229868.peg.755 CDS CM001794.1 1128226 1127594 -1 - 633 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229868.peg.756 CDS CM001794.1 1129406 1128210 -2 - 1197 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229868.peg.757 CDS CM001794.1 1130361 1129495 -3 - 867 Radical SAM domain protein - none -
fig|6666666.229868.peg.758 CDS CM001794.1 1130490 1130750 3 + 261 FIG00756013: hypothetical protein - none -
fig|6666666.229868.peg.759 CDS CM001794.1 1130816 1131508 2 + 693 FIG004694: Hypothetical protein - none -
fig|6666666.229868.peg.760 CDS CM001794.1 1131509 1132279 2 + 771 Beta-propeller domains of methanol dehydrogenase type - none -
fig|6666666.229868.peg.761 CDS CM001794.1 1132610 1134142 2 + 1533 T. pallidum predicted coding region TP0929 - none -
fig|6666666.229868.peg.762 CDS CM001794.1 1134145 1135893 1 + 1749 hypothetical protein - none -
fig|6666666.229868.peg.763 CDS CM001794.1 1137768 1135951 -3 - 1818 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.764 CDS CM001794.1 1139581 1137755 -1 - 1827 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.765 CDS CM001794.1 1139767 1140597 1 + 831 nucleotide-binding protein - none -
fig|6666666.229868.peg.766 CDS CM001794.1 1140630 1142018 3 + 1389 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229868.peg.767 CDS CM001794.1 1142128 1143414 1 + 1287 serine/threonine kinase - none -
fig|6666666.229868.peg.768 CDS CM001794.1 1143860 1144537 2 + 678 hypothetical protein - none -
fig|6666666.229868.peg.769 CDS CM001794.1 1145283 1144534 -3 - 750 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229868.peg.770 CDS CM001794.1 1146674 1145301 -2 - 1374 Aldehyde dehydrogenase (EC 1.2.1.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Methylglyoxal Metabolism;
Methylglyoxal Metabolism;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229868.peg.771 CDS CM001794.1 1148410 1146743 -1 - 1668 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.772 CDS CM001794.1 1150145 1148403 -2 - 1743 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.773 CDS CM001794.1 1151139 1150255 -3 - 885 AraC-family transcriptional regulator - none -
fig|6666666.229868.peg.774 CDS CM001794.1 1152653 1151286 -2 - 1368 hypothetical protein - none -
fig|6666666.229868.peg.775 CDS CM001794.1 1153746 1152751 -3 - 996 COG1180: Radical SAM, Pyruvate-formate lyase-activating enzyme like - none -
fig|6666666.229868.peg.776 CDS CM001794.1 1154202 1153786 -3 - 417 hypothetical protein - none -
fig|6666666.229868.peg.777 CDS CM001794.1 1155249 1154233 -3 - 1017 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.229868.peg.778 CDS CM001794.1 1156423 1155251 -1 - 1173 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase Phosphoglycerate mutase protein family
fig|6666666.229868.peg.779 CDS CM001794.1 1158516 1156486 -3 - 2031 Signal transduction histidine kinase - none -
fig|6666666.229868.peg.780 CDS CM001794.1 1159717 1158503 -1 - 1215 response regulator - none -
fig|6666666.229868.peg.781 CDS CM001794.1 1159795 1160349 1 + 555 DJ-1 family protein - none -
fig|6666666.229868.peg.782 CDS CM001794.1 1160349 1161110 3 + 762 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.229868.peg.783 CDS CM001794.1 1161205 1161972 1 + 768 metallo-beta-lactamase family protein - none -
fig|6666666.229868.peg.784 CDS CM001794.1 1162147 1163001 1 + 855 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.785 CDS CM001794.1 1163328 1163044 -3 - 285 conserved hypothetical protein - none -
fig|6666666.229868.peg.786 CDS CM001794.1 1163518 1164423 1 + 906 hypothetical protein - none -
fig|6666666.229868.peg.787 CDS CM001794.1 1164433 1165227 1 + 795 Uracil-DNA glycosylase, family 4 Uracil-DNA glycosylase
fig|6666666.229868.peg.788 CDS CM001794.1 1165247 1167229 2 + 1983 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229868.peg.789 CDS CM001794.1 1167455 1168540 2 + 1086 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.229868.peg.790 CDS CM001794.1 1168547 1169536 2 + 990 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.229868.peg.791 CDS CM001794.1 1170074 1169568 -2 - 507 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.792 CDS CM001794.1 1170644 1170090 -2 - 555 hypothetical protein - none -
fig|6666666.229868.peg.793 CDS CM001794.1 1170808 1172028 1 + 1221 Putative virion core protein (lumpy skin disease virus) - none -
fig|6666666.229868.peg.794 CDS CM001794.1 1172211 1173278 3 + 1068 Primosomal protein N@1 (replication factor Y) - superfamily II helicase - none -
fig|6666666.229868.peg.795 CDS CM001794.1 1173272 1174051 2 + 780 hypothetical protein - none -
fig|6666666.229868.peg.796 CDS CM001794.1 1174308 1174138 -3 - 171 hypothetical protein - none -
fig|6666666.229868.peg.797 CDS CM001794.1 1174656 1176578 3 + 1923 Chaperone protein HtpG Protein chaperones
fig|6666666.229868.peg.798 CDS CM001794.1 1176650 1177039 2 + 390 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.229868.peg.799 CDS CM001794.1 1179014 1177059 -2 - 1956 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229868.peg.800 CDS CM001794.1 1180364 1179018 -2 - 1347 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229868.peg.801 CDS CM001794.1 1181346 1180492 -3 - 855 Transposase - none -
fig|6666666.229868.peg.802 CDS CM001794.1 1181544 1182473 3 + 930 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229868.peg.803 CDS CM001794.1 1182473 1183864 2 + 1392 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog Multidrug Resistance Efflux Pumps
fig|6666666.229868.peg.804 CDS CM001794.1 1183898 1184392 2 + 495 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.805 CDS CM001794.1 1184658 1184437 -3 - 222 SSU ribosomal protein S21p Macromolecular synthesis operon
fig|6666666.229868.peg.806 CDS CM001794.1 1184731 1185786 1 + 1056 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229868.peg.807 CDS CM001794.1 1185953 1186753 2 + 801 Amino acid ABC transporter, periplasmic amino acid-binding portion - none -
fig|6666666.229868.peg.808 CDS CM001794.1 1186965 1186780 -3 - 186 hypothetical protein - none -
fig|6666666.229868.peg.809 CDS CM001794.1 1187084 1187497 2 + 414 Amino acid ABC transporter, permease protein - none -
fig|6666666.229868.peg.810 CDS CM001794.1 1187530 1188357 1 + 828 Conserved protein - none -
fig|6666666.229868.peg.811 CDS CM001794.1 1188361 1189098 1 + 738 ABC-type polar amino acid transport system, ATPase component - none -
fig|6666666.229868.peg.812 CDS CM001794.1 1189201 1190370 1 + 1170 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Degradation
fig|6666666.229868.peg.813 CDS CM001794.1 1190420 1191733 2 + 1314 Hexokinase (EC 2.7.1.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229868.peg.814 CDS CM001794.1 1192014 1191814 -3 - 201 hypothetical protein - none -
fig|6666666.229868.peg.815 CDS CM001794.1 1192039 1193088 1 + 1050 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229868.peg.816 CDS CM001794.1 1193109 1193318 3 + 210 hypothetical protein - none -
fig|6666666.229868.peg.817 CDS CM001794.1 1193369 1193578 2 + 210 hypothetical protein - none -
fig|6666666.229868.peg.818 CDS CM001794.1 1194441 1193809 -3 - 633 hypothetical protein - none -
fig|6666666.229868.peg.819 CDS CM001794.1 1194565 1195629 1 + 1065 Selenide,water dikinase (EC 2.7.9.3) @ selenocysteine-containing Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229868.peg.821 CDS CM001794.1 1196792 1195626 -2 - 1167 Cysteine desulfurase (EC 2.8.1.7) Alanine biosynthesis;
CBSS-84588.1.peg.1247;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229868.peg.822 CDS CM001794.1 1197181 1197038 -1 - 144 Transmembrane component BL0694 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.823 CDS CM001794.1 1197290 1197733 2 + 444 hypothetical protein - none -
fig|6666666.229868.peg.824 CDS CM001794.1 1197858 1198295 3 + 438 hypothetical protein - none -
fig|6666666.229868.peg.825 CDS CM001794.1 1198359 1198904 3 + 546 TrsK-like protein - none -
fig|6666666.229868.peg.826 CDS CM001794.1 1199055 1200080 3 + 1026 hypothetical protein - none -
fig|6666666.229868.peg.827 CDS CM001794.1 1201047 1202687 3 + 1641 lipoprotein, putative - none -
fig|6666666.229868.peg.828 CDS CM001794.1 1203904 1202861 -1 - 1044 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229868.peg.829 CDS CM001794.1 1204831 1203929 -1 - 903 ankyrin repeat protein - none -
fig|6666666.229868.peg.830 CDS CM001794.1 1204920 1206326 3 + 1407 COG2078: Uncharacterized ACR - none -
fig|6666666.229868.peg.831 CDS CM001794.1 1206369 1206809 3 + 441 FIG01188278: hypothetical protein - none -
fig|6666666.229868.peg.832 CDS CM001794.1 1206858 1207466 3 + 609 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229868.peg.833 CDS CM001794.1 1207516 1209012 1 + 1497 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229868.peg.834 CDS CM001794.1 1209424 1209149 -1 - 276 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.835 CDS CM001794.1 1209574 1210038 1 + 465 hypothetical protein - none -
fig|6666666.229868.peg.836 CDS CM001794.1 1210093 1212258 1 + 2166 hypothetical protein - none -
fig|6666666.229868.peg.837 CDS CM001794.1 1212484 1214166 1 + 1683 ABC TRANSPORTER ATP-BINDING - none -
fig|6666666.229868.peg.838 CDS CM001794.1 1214253 1215344 3 + 1092 Deblocking aminopeptidase (EC 3.4.11.-) Protein degradation
fig|6666666.229868.peg.839 CDS CM001794.1 1215357 1216649 3 + 1293 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family Potassium homeostasis
fig|6666666.229868.peg.840 CDS CM001794.1 1216639 1217196 1 + 558 cyclic nucleotide binding domain protein - none -
fig|6666666.229868.peg.841 CDS CM001794.1 1217962 1217198 -1 - 765 hypothetical protein - none -
fig|6666666.229868.peg.842 CDS CM001794.1 1218140 1218748 2 + 609 FIG01188856: hypothetical protein - none -
fig|6666666.229868.peg.843 CDS CM001794.1 1218838 1219104 1 + 267 hypothetical protein - none -
fig|6666666.229868.peg.844 CDS CM001794.1 1219104 1221473 3 + 2370 polysaccharide deacetylase family protein - none -
fig|6666666.229868.peg.845 CDS CM001794.1 1222240 1221539 -1 - 702 treponemal membrane protein, putative - none -
fig|6666666.229868.peg.846 CDS CM001794.1 1223310 1222240 -3 - 1071 treponemal membrane protein, putative - none -
fig|6666666.229868.peg.847 CDS CM001794.1 1223448 1225604 3 + 2157 Phospholipid-lipopolysaccharide ABC transporter N-linked Glycosylation in Bacteria
fig|6666666.229868.peg.848 CDS CM001794.1 1225601 1226740 2 + 1140 HlyD family secretion protein - none -
fig|6666666.229868.peg.849 CDS CM001794.1 1226737 1228146 1 + 1410 hypothetical protein - none -
fig|6666666.229868.peg.850 CDS CM001794.1 1228482 1228652 3 + 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-dependent - none -
fig|6666666.229868.peg.851 CDS CM001794.1 1228792 1228971 1 + 180 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229868.peg.852 CDS CM001794.1 1228975 1229532 1 + 558 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229868.peg.853 CDS CM001794.1 1229624 1230055 2 + 432 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster
fig|6666666.229868.peg.854 CDS CM001794.1 1230057 1230737 3 + 681 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster
fig|6666666.229868.peg.855 CDS CM001794.1 1230740 1231357 2 + 618 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster
fig|6666666.229868.peg.856 CDS CM001794.1 1231473 1231862 3 + 390 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster
fig|6666666.229868.peg.857 CDS CM001794.1 1232011 1235514 1 + 3504 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229868.peg.858 CDS CM001794.1 1235539 1239813 1 + 4275 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229868.peg.859 CDS CM001794.1 1240124 1241548 2 + 1425 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.860 CDS CM001794.1 1241577 1243085 3 + 1509 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.861 CDS CM001794.1 1243094 1245154 2 + 2061 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.862 CDS CM001794.1 1245265 1247085 1 + 1821 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.229868.peg.863 CDS CM001794.1 1247231 1247977 2 + 747 hypothetical protein - none -
fig|6666666.229868.peg.864 CDS CM001794.1 1248167 1248667 2 + 501 hypothetical protein - none -
fig|6666666.229868.peg.865 CDS CM001794.1 1248780 1249256 3 + 477 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) - none -
fig|6666666.229868.peg.866 CDS CM001794.1 1249269 1249712 3 + 444 hypothetical protein - none -
fig|6666666.229868.peg.867 CDS CM001794.1 1249723 1250355 1 + 633 hypothetical protein - none -
fig|6666666.229868.peg.868 CDS CM001794.1 1250448 1251047 3 + 600 hypothetical protein - none -
fig|6666666.229868.peg.869 CDS CM001794.1 1251080 1251745 2 + 666 hypothetical protein - none -
fig|6666666.229868.peg.870 CDS CM001794.1 1251825 1252055 3 + 231 hypothetical protein - none -
fig|6666666.229868.peg.871 CDS CM001794.1 1252239 1252706 3 + 468 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.872 CDS CM001794.1 1252814 1255261 2 + 2448 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.229868.peg.873 CDS CM001794.1 1256318 1255341 -2 - 978 Microsomal dipeptidase (EC 3.4.13.19) - none -
fig|6666666.229868.peg.874 CDS CM001794.1 1257017 1256319 -2 - 699 membrane protein, putative - none -
fig|6666666.229868.peg.875 CDS CM001794.1 1257740 1257027 -2 - 714 hypothetical protein - none -
fig|6666666.229868.peg.876 CDS CM001794.1 1257992 1259179 2 + 1188 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229868.peg.877 CDS CM001794.1 1259188 1260399 1 + 1212 hypothetical protein - none -
fig|6666666.229868.peg.878 CDS CM001794.1 1260506 1261027 2 + 522 membrane protein, putative - none -
fig|6666666.229868.peg.879 CDS CM001794.1 1261125 1261295 3 + 171 hypothetical protein - none -
fig|6666666.229868.peg.880 CDS CM001794.1 1261406 1262869 2 + 1464 Amidophosphoribosyltransferase (EC 2.4.2.14) Colicin V and Bacteriocin Production Cluster;
De Novo Purine Biosynthesis
fig|6666666.229868.peg.881 CDS CM001794.1 1262928 1264205 3 + 1278 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.882 CDS CM001794.1 1264206 1264772 3 + 567 hypothetical protein - none -
fig|6666666.229868.peg.883 CDS CM001794.1 1264851 1266317 3 + 1467 TldD family protein, Beta/Gamma-proteobacterial subgroup Putative TldE-TldD proteolytic complex
fig|6666666.229868.peg.884 CDS CM001794.1 1266314 1267648 2 + 1335 TldE/PmbA family protein, Beta/Gamma-proteobacterial subgroup Putative TldE-TldD proteolytic complex
fig|6666666.229868.peg.885 CDS CM001794.1 1267660 1269051 1 + 1392 RNA polymerase sigma-54 factor RpoN Flagellar motility;
Flagellum;
Transcription initiation, bacterial sigma factors
fig|6666666.229868.peg.886 CDS CM001794.1 1269083 1269724 2 + 642 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229868.peg.887 CDS CM001794.1 1270624 1269731 -1 - 894 COG1180: Radical SAM, Pyruvate-formate lyase-activating enzyme like - none -
fig|6666666.229868.peg.888 CDS CM001794.1 1271809 1270673 -1 - 1137 L-threonine 3-dehydrogenase (EC 1.1.1.103) Glycine Biosynthesis;
Threonine degradation
fig|6666666.229868.peg.889 CDS CM001794.1 1272132 1272287 3 + 156 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229868.peg.890 CDS CM001794.1 1272476 1272655 2 + 180 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229868.peg.891 CDS CM001794.1 1272652 1272873 1 + 222 Protein YidD Cell Division Subsystem including YidCD;
Mycobacterium virulence operon involved in an unknown function with a Jag Protein and YidC and YidD;
RNA modification cluster
fig|6666666.229868.peg.892 CDS CM001794.1 1273061 1274809 2 + 1749 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
Mycobacterium virulence operon involved in an unknown function with a Jag Protein and YidC and YidD;
RNA modification cluster
fig|6666666.229868.peg.893 CDS CM001794.1 1274849 1275559 2 + 711 RNA-binding protein Jag Cell Division Subsystem including YidCD;
Mycobacterium virulence operon involved in an unknown function with a Jag Protein and YidC and YidD
fig|6666666.229868.peg.894 CDS CM001794.1 1275773 1276630 2 + 858 FIG01188033: hypothetical protein - none -
fig|6666666.229868.peg.895 CDS CM001794.1 1276642 1277724 1 + 1083 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.229868.peg.896 CDS CM001794.1 1277748 1278791 3 + 1044 hypothetical protein - none -
fig|6666666.229868.peg.897 CDS CM001794.1 1278884 1279957 2 + 1074 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) Cobalamin synthesis
fig|6666666.229868.peg.898 CDS CM001794.1 1280518 1279916 -1 - 603 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229868.peg.899 CDS CM001794.1 1282215 1280593 -3 - 1623 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.229868.peg.900 CDS CM001794.1 1282844 1282212 -2 - 633 hypothetical protein - none -
fig|6666666.229868.peg.901 CDS CM001794.1 1283956 1282850 -1 - 1107 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229868.peg.902 CDS CM001794.1 1284628 1284038 -1 - 591 Alpha-ribazole-5@1-phosphate phosphatase (EC 3.1.3.73) Cobalamin synthesis;
Phosphoglycerate mutase protein family
fig|6666666.229868.peg.903 CDS CM001794.1 1285428 1284646 -3 - 783 Cobalamin synthase - none -
fig|6666666.229868.peg.904 CDS CM001794.1 1285976 1285425 -2 - 552 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Cobalamin synthesis
fig|6666666.229868.peg.905 CDS CM001794.1 1287222 1286038 -3 - 1185 histidine kinase-related ATPase, putative - none -
fig|6666666.229868.peg.906 CDS CM001794.1 1288436 1287273 -2 - 1164 Export ABC transporter permease - none -
fig|6666666.229868.peg.907 CDS CM001794.1 1289586 1288447 -3 - 1140 ABC transporter, permease protein - none -
fig|6666666.229868.peg.908 CDS CM001794.1 1290536 1289598 -2 - 939 ABC transporter, ATP-binding protein, putative - none -
fig|6666666.229868.peg.909 CDS CM001794.1 1290779 1291645 2 + 867 hypothetical protein - none -
fig|6666666.229868.peg.910 CDS CM001794.1 1291645 1291962 1 + 318 hypothetical protein - none -
fig|6666666.229868.peg.911 CDS CM001794.1 1292547 1291984 -3 - 564 Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) - none -
fig|6666666.229868.peg.912 CDS CM001794.1 1293133 1292534 -1 - 600 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) - none -
fig|6666666.229868.peg.913 CDS CM001794.1 1293745 1293137 -1 - 609 conserved domain protein - none -
fig|6666666.229868.peg.914 CDS CM001794.1 1294736 1293840 -2 - 897 iron-sulfur cluster-binding protein - none -
fig|6666666.229868.peg.915 CDS CM001794.1 1294866 1294729 -3 - 138 hypothetical protein - none -
fig|6666666.229868.peg.916 CDS CM001794.1 1295964 1294867 -3 - 1098 hypothetical protein - none -
fig|6666666.229868.peg.917 CDS CM001794.1 1296527 1296066 -2 - 462 tRNA proofreading protein STM4549 tRNA aminoacylation, Pro
fig|6666666.229868.peg.918 CDS CM001794.1 1297177 1296533 -1 - 645 transcriptional regulator, putative - none -
fig|6666666.229868.peg.919 CDS CM001794.1 1297449 1298348 3 + 900 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) ABC transporter branched-chain amino acid (TC 3.A.1.4.1)
fig|6666666.229868.peg.920 CDS CM001794.1 1298358 1299377 3 + 1020 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) ABC transporter branched-chain amino acid (TC 3.A.1.4.1)
fig|6666666.229868.peg.921 CDS CM001794.1 1299358 1300128 1 + 771 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) ABC transporter branched-chain amino acid (TC 3.A.1.4.1)
fig|6666666.229868.peg.922 CDS CM001794.1 1300128 1300835 3 + 708 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) ABC transporter branched-chain amino acid (TC 3.A.1.4.1)
fig|6666666.229868.peg.923 CDS CM001794.1 1300835 1301344 2 + 510 FIG01188814: hypothetical protein - none -
fig|6666666.229868.peg.924 CDS CM001794.1 1301341 1302498 1 + 1158 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) ABC transporter branched-chain amino acid (TC 3.A.1.4.1)
fig|6666666.229868.peg.925 CDS CM001794.1 1302508 1303515 1 + 1008 Putative dihydroxyacetone kinase (EC 2.7.1.29), dihydroxyacetone binding subunit Dihydroxyacetone kinases
fig|6666666.229868.peg.926 CDS CM001794.1 1303525 1304154 1 + 630 Putative dihydroxyacetone kinase (EC 2.7.1.29), ADP-binding subunit Dihydroxyacetone kinases
fig|6666666.229868.peg.927 CDS CM001794.1 1304171 1305178 2 + 1008 hypothetical protein - none -
fig|6666666.229868.peg.928 CDS CM001794.1 1306222 1305239 -1 - 984 ABC-type Fe3+-siderophore transport system, permease component - none -
fig|6666666.229868.peg.929 CDS CM001794.1 1307163 1306234 -3 - 930 Heme transporter IsdDEF, lipoprotein IsdE - none -
fig|6666666.229868.peg.930 CDS CM001794.1 1307414 1307187 -2 - 228 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229868.peg.931 CDS CM001794.1 1307857 1307414 -1 - 444 Flagellar assembly factor FliW Carbon storage regulator
fig|6666666.229868.peg.932 CDS CM001794.1 1309123 1307876 -1 - 1248 Flagellar hook-associated protein FlgL Flagellum
fig|6666666.229868.peg.933 CDS CM001794.1 1311017 1309146 -2 - 1872 Flagellar hook-associated protein FlgK Flagellum
fig|6666666.229868.peg.934 CDS CM001794.1 1311531 1311040 -3 - 492 hypothetical protein - none -
fig|6666666.229868.peg.935 CDS CM001794.1 1311653 1312261 2 + 609 hypothetical protein - none -
fig|6666666.229868.peg.936 CDS CM001794.1 1312428 1313078 3 + 651 hypothetical protein - none -
fig|6666666.229868.peg.937 CDS CM001794.1 1313095 1313706 1 + 612 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.229868.peg.938 CDS CM001794.1 1313936 1314811 2 + 876 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229868.peg.939 CDS CM001794.1 1314885 1315727 3 + 843 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229868.peg.940 CDS CM001794.1 1315811 1316368 2 + 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229868.peg.941 CDS CM001794.1 1316369 1317052 2 + 684 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229868.peg.942 CDS CM001794.1 1317074 1317931 2 + 858 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229868.peg.943 CDS CM001794.1 1317931 1319076 1 + 1146 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229868.peg.944 CDS CM001794.1 1319096 1320448 2 + 1353 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage CBSS-83331.1.peg.3039;
Periplasmic Stress Response
fig|6666666.229868.peg.945 CDS CM001794.1 1320459 1320821 3 + 363 FMN-binding domain protein - none -
fig|6666666.229868.peg.946 CDS CM001794.1 1323416 1320840 -2 - 2577 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.229868.peg.947 CDS CM001794.1 1324966 1323737 -1 - 1230 Aminopeptidase S (Leu, Val, Phe, Tyr preference) (EC 3.4.11.24) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229868.peg.948 CDS CM001794.1 1325115 1326386 3 + 1272 Proton/glutamate symport protein @ Sodium/glutamate symport protein - none -
fig|6666666.229868.peg.949 CDS CM001794.1 1328620 1326383 -1 - 2238 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229868.peg.950 CDS CM001794.1 1329627 1328749 -3 - 879 hypothetical protein - none -
fig|6666666.229868.peg.951 CDS CM001794.1 1329755 1330435 2 + 681 sanA protein, putative - none -
fig|6666666.229868.peg.952 CDS CM001794.1 1330532 1330768 2 + 237 hypothetical protein - none -
fig|6666666.229868.peg.953 CDS CM001794.1 1330768 1331130 1 + 363 Death on curing protein, Doc toxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.229868.peg.954 CDS CM001794.1 1331812 1331973 1 + 162 hypothetical protein - none -
fig|6666666.229868.peg.955 CDS CM001794.1 1333520 1331970 -2 - 1551 Aminobenzoyl-glutamate transport protein - none -
fig|6666666.229868.peg.956 CDS CM001794.1 1333677 1336256 3 + 2580 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229868.peg.957 CDS CM001794.1 1337152 1336307 -1 - 846 Cobyric acid synthase (EC 6.3.5.10) Cobalamin synthesis
fig|6666666.229868.peg.958 CDS CM001794.1 1338302 1337157 -2 - 1146 FIG00514177: hypothetical protein - none -
fig|6666666.229868.peg.959 CDS CM001794.1 1339066 1338413 -1 - 654 DNA-binding response regulator - none -
fig|6666666.229868.peg.960 CDS CM001794.1 1339221 1340441 3 + 1221 Small-conductance mechanosensitive channel - none -
fig|6666666.229868.peg.961 CDS CM001794.1 1340501 1340971 2 + 471 Flagellar biosynthesis protein FliL Flagellum
fig|6666666.229868.peg.962 CDS CM001794.1 1341004 1341360 1 + 357 hypothetical protein - none -
fig|6666666.229868.peg.963 CDS CM001794.1 1341353 1341994 2 + 642 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229868.peg.964 CDS CM001794.1 1342014 1342469 3 + 456 hypothetical protein - none -
fig|6666666.229868.peg.965 CDS CM001794.1 1343389 1342466 -1 - 924 LysM domain/M23/M37 peptidase domain protein - none -
fig|6666666.229868.peg.966 CDS CM001794.1 1343533 1344186 1 + 654 COG1272: Predicted membrane protein hemolysin III homolog - none -
fig|6666666.229868.peg.967 CDS CM001794.1 1345347 1344538 -3 - 810 hypothetical protein - none -
fig|6666666.229868.peg.968 CDS CM001794.1 1346077 1345337 -1 - 741 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC - none -
fig|6666666.229868.peg.969 CDS CM001794.1 1346457 1348964 3 + 2508 lipoprotein, putative - none -
fig|6666666.229868.peg.970 CDS CM001794.1 1349020 1350132 1 + 1113 internalin-related protein - none -
fig|6666666.229868.peg.971 CDS CM001794.1 1350660 1350502 -3 - 159 hypothetical protein - none -
fig|6666666.229868.peg.972 CDS CM001794.1 1350879 1351793 3 + 915 hypothetical protein - none -
fig|6666666.229868.peg.973 CDS CM001794.1 1352398 1352009 -1 - 390 hypothetical protein - none -
fig|6666666.229868.peg.974 CDS CM001794.1 1352740 1352621 -1 - 120 hypothetical protein - none -
fig|6666666.229868.peg.975 CDS CM001794.1 1352945 1352760 -2 - 186 hypothetical protein - none -
fig|6666666.229868.peg.976 CDS CM001794.1 1352905 1354446 1 + 1542 sigma-54 dependent transcriptional regulator, putative - none -
fig|6666666.229868.peg.977 CDS CM001794.1 1355350 1354721 -1 - 630 hypothetical protein - none -
fig|6666666.229868.peg.978 CDS CM001794.1 1355501 1356769 2 + 1269 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229868.peg.979 CDS CM001794.1 1357331 1356879 -2 - 453 hypothetical protein - none -
fig|6666666.229868.peg.980 CDS CM001794.1 1357462 1357328 -1 - 135 hypothetical protein - none -
fig|6666666.229868.peg.981 CDS CM001794.1 1357928 1357536 -2 - 393 Endonuclease (EC 3.1.-.-) - none -
fig|6666666.229868.peg.982 CDS CM001794.1 1359193 1357928 -1 - 1266 HD domain protein - none -
fig|6666666.229868.peg.983 CDS CM001794.1 1359474 1359211 -3 - 264 Flagellar biosynthesis protein FlhB Flagellar motility;
Flagellum
fig|6666666.229868.peg.984 CDS CM001794.1 1359599 1361080 2 + 1482 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229868.peg.985 CDS CM001794.1 1362703 1361126 -1 - 1578 Apolipoprotein N-acyltransferase (EC 2.3.1.-) Lipoprotein Biosynthesis
fig|6666666.229868.peg.986 CDS CM001794.1 1362766 1363920 1 + 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229868.peg.987 CDS CM001794.1 1364015 1364695 2 + 681 TPR domain protein - none -
fig|6666666.229868.peg.988 CDS CM001794.1 1364697 1366751 3 + 2055 hypothetical protein - none -
fig|6666666.229868.peg.989 CDS CM001794.1 1366758 1368146 3 + 1389 SARB56_Orf - none -
fig|6666666.229868.peg.990 CDS CM001794.1 1369072 1368248 -1 - 825 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229868.peg.991 CDS CM001794.1 1369146 1369847 3 + 702 phosphoglycolate phosphatase (gph-1) - none -
fig|6666666.229868.peg.992 CDS CM001794.1 1369886 1373131 2 + 3246 FIG01186991: hypothetical protein - none -
fig|6666666.229868.peg.993 CDS CM001794.1 1373588 1373103 -2 - 486 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229868.peg.994 CDS CM001794.1 1374316 1373585 -1 - 732 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229868.peg.995 CDS CM001794.1 1374932 1374303 -2 - 630 CarD-like transcriptional regulator - none -
fig|6666666.229868.peg.996 CDS CM001794.1 1376645 1374993 -2 - 1653 Uridine kinase (EC 2.7.1.48) pyrimidine conversions
fig|6666666.229868.peg.997 CDS CM001794.1 1376815 1377321 1 + 507 hypothetical protein - none -
fig|6666666.229868.peg.998 CDS CM001794.1 1377402 1378151 3 + 750 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229868.peg.999 CDS CM001794.1 1379056 1378211 -1 - 846 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229868.peg.1000 CDS CM001794.1 1379195 1379557 2 + 363 Transposase - none -
fig|6666666.229868.peg.1001 CDS CM001794.1 1379716 1380024 1 + 309 Transposase - none -
fig|6666666.229868.peg.1002 CDS CM001794.1 1380088 1380201 1 + 114 hypothetical protein - none -
fig|6666666.229868.peg.1003 CDS CM001794.1 1380194 1381606 2 + 1413 hypothetical protein - none -
fig|6666666.229868.peg.1004 CDS CM001794.1 1381607 1382572 2 + 966 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229868.peg.1005 CDS CM001794.1 1382580 1383818 3 + 1239 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229868.peg.1006 CDS CM001794.1 1383833 1384870 2 + 1038 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229868.peg.1007 CDS CM001794.1 1385005 1386072 1 + 1068 LysM domain protein - none -
fig|6666666.229868.peg.1008 CDS CM001794.1 1386134 1388200 2 + 2067 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229868.peg.1009 CDS CM001794.1 1389702 1388221 -3 - 1482 FIG01187349: hypothetical protein - none -
fig|6666666.229868.peg.1010 CDS CM001794.1 1390762 1390007 -1 - 756 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.229868.peg.1011 CDS CM001794.1 1390885 1391547 1 + 663 hypothetical protein - none -
fig|6666666.229868.peg.1012 CDS CM001794.1 1392366 1391560 -3 - 807 tRNA pseudouridine synthase A (EC 4.2.1.70) Colicin V and Bacteriocin Production Cluster;
RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229868.peg.1013 CDS CM001794.1 1393241 1392366 -2 - 876 B. burgdorferi predicted coding region BB0011 - none -
fig|6666666.229868.peg.1014 CDS CM001794.1 1393484 1394512 2 + 1029 hypothetical protein - none -
fig|6666666.229868.peg.1015 CDS CM001794.1 1394505 1395011 3 + 507 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229868.peg.1016 CDS CM001794.1 1395113 1397212 2 + 2100 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.1017 CDS CM001794.1 1397389 1399179 1 + 1791 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.1018 CDS CM001794.1 1399231 1400145 1 + 915 lipase/esterase( EC:3.1.1.- ) - none -
fig|6666666.229868.peg.1019 CDS CM001794.1 1400145 1401395 3 + 1251 peptidase, U32 family - none -
fig|6666666.229868.peg.1020 CDS CM001794.1 1401460 1403061 1 + 1602 5@1-nucleotidase (EC 3.1.3.5) Purine conversions;
pyrimidine conversions
fig|6666666.229868.peg.1021 CDS CM001794.1 1403177 1404358 2 + 1182 membrane protein, putative - none -
fig|6666666.229868.peg.1022 CDS CM001794.1 1405073 1404411 -2 - 663 hypothetical protein - none -
fig|6666666.229868.peg.1023 CDS CM001794.1 1405511 1405095 -2 - 417 Phage-related protein - none -
fig|6666666.229868.peg.1024 CDS CM001794.1 1405718 1405521 -2 - 198 hypothetical protein - none -
fig|6666666.229868.peg.1025 CDS CM001794.1 1407076 1405814 -1 - 1263 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229868.peg.1026 CDS CM001794.1 1407933 1407187 -3 - 747 FIG028593: membrane protein - none -
fig|6666666.229868.peg.1027 CDS CM001794.1 1408010 1409068 2 + 1059 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229868.peg.1028 CDS CM001794.1 1409088 1409807 3 + 720 Molybdopterin biosynthesis protein MoeB - none -
fig|6666666.229868.peg.1029 CDS CM001794.1 1410145 1409822 -1 - 324 Death on curing protein, Doc toxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.229868.peg.1030 CDS CM001794.1 1410381 1410139 -3 - 243 Prevent host death protein, Phd antitoxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.229868.peg.1031 CDS CM001794.1 1412274 1410457 -3 - 1818 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229868.peg.1032 CDS CM001794.1 1413494 1412274 -2 - 1221 Chromosome partition protein smc DNA structural proteins, bacterial
fig|6666666.229868.peg.1033 CDS CM001794.1 1413610 1414350 1 + 741 Cytoplasmic copper homeostasis protein CutC Copper homeostasis: copper tolerance
fig|6666666.229868.peg.1034 CDS CM001794.1 1414468 1415334 1 + 867 hypothetical protein - none -
fig|6666666.229868.peg.1035 CDS CM001794.1 1415450 1417873 2 + 2424 antigen, putative - none -
fig|6666666.229868.peg.1036 CDS CM001794.1 1417874 1418926 2 + 1053 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster - none -
fig|6666666.229868.peg.1037 CDS CM001794.1 1418997 1419812 3 + 816 hypothetical protein - none -
fig|6666666.229868.peg.1038 CDS CM001794.1 1419809 1420894 2 + 1086 serine/threonine kinase - none -
fig|6666666.229868.peg.1039 CDS CM001794.1 1421339 1422796 2 + 1458 Methylaspartate mutase, E subunit (EC 5.4.99.1) - none -
fig|6666666.229868.peg.1040 CDS CM001794.1 1422868 1424106 1 + 1239 Methylaspartate ammonia-lyase (EC 4.3.1.2) - none -
fig|6666666.229868.peg.1041 CDS CM001794.1 1424212 1425147 1 + 936 Vitamin B12 ABC transporter, B12-binding component BtuF - none -
fig|6666666.229868.peg.1042 CDS CM001794.1 1425147 1426166 3 + 1020 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229868.peg.1043 CDS CM001794.1 1426172 1426951 2 + 780 Vitamin B12 ABC transporter, ATPase component BtuD - none -
fig|6666666.229868.peg.1044 CDS CM001794.1 1427769 1426948 -3 - 822 internalin-related protein - none -
fig|6666666.229868.peg.1045 CDS CM001794.1 1427932 1427747 -1 - 186 hypothetical protein - none -
fig|6666666.229868.peg.1046 CDS CM001794.1 1428040 1428366 1 + 327 hypothetical protein - none -
fig|6666666.229868.peg.1047 CDS CM001794.1 1428459 1428605 3 + 147 conserved domain protein - none -
fig|6666666.229868.peg.1048 CDS CM001794.1 1428705 1430150 3 + 1446 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229868.peg.1049 CDS CM001794.1 1430992 1430333 -1 - 660 membrane protein, putative - none -
fig|6666666.229868.peg.1050 CDS CM001794.1 1432025 1431054 -2 - 972 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229868.peg.1051 CDS CM001794.1 1432526 1432119 -2 - 408 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229868.peg.1052 CDS CM001794.1 1432651 1432523 -1 - 129 hypothetical protein - none -
fig|6666666.229868.peg.1053 CDS CM001794.1 1433656 1432772 -1 - 885 FIG01187835: hypothetical protein - none -
fig|6666666.229868.peg.1054 CDS CM001794.1 1434710 1433676 -2 - 1035 hypothetical protein - none -
fig|6666666.229868.peg.1055 CDS CM001794.1 1436509 1434722 -1 - 1788 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229868.peg.1056 CDS CM001794.1 1436789 1438474 2 + 1686 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.229868.peg.1057 CDS CM001794.1 1439341 1438463 -1 - 879 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.229868.peg.1058 CDS CM001794.1 1439460 1440671 3 + 1212 galactose/glucose-binding lipoprotein - none -
fig|6666666.229868.peg.1059 CDS CM001794.1 1440795 1442288 3 + 1494 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229868.peg.1060 CDS CM001794.1 1442313 1444007 3 + 1695 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229868.peg.1061 CDS CM001794.1 1444348 1444013 -1 - 336 HicB protein - none -
fig|6666666.229868.peg.1062 CDS CM001794.1 1444598 1444341 -2 - 258 HicA-related protein - none -
fig|6666666.229868.peg.1063 CDS CM001794.1 1444767 1445966 3 + 1200 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229868.peg.1064 CDS CM001794.1 1446125 1446724 2 + 600 hypothetical protein - none -
fig|6666666.229868.peg.1065 CDS CM001794.1 1446740 1448047 2 + 1308 conserved hypothetical protein - none -
fig|6666666.229868.peg.1066 CDS CM001794.1 1449801 1448125 -3 - 1677 FIG01187668: hypothetical protein - none -
fig|6666666.229868.peg.1067 CDS CM001794.1 1450612 1449833 -1 - 780 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229868.peg.1068 CDS CM001794.1 1450769 1450650 -2 - 120 hypothetical protein - none -
fig|6666666.229868.peg.1069 CDS CM001794.1 1450914 1452182 3 + 1269 Uncharacterized protein MJ1313 - none -
fig|6666666.229868.peg.1070 CDS CM001794.1 1452184 1452627 1 + 444 hypothetical protein - none -
fig|6666666.229868.peg.1071 CDS CM001794.1 1452816 1455089 3 + 2274 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.229868.peg.1072 CDS CM001794.1 1455285 1456646 3 + 1362 Methionine transporter MetT Methionine Degradation
fig|6666666.229868.peg.1073 CDS CM001794.1 1457642 1456704 -2 - 939 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229868.peg.1074 CDS CM001794.1 1457827 1459032 1 + 1206 Methionine gamma-lyase (EC 4.4.1.11) Methionine Degradation
fig|6666666.229868.peg.1075 CDS CM001794.1 1459101 1459805 3 + 705 racemase, Asp/Glu/Hydantoin family - none -
fig|6666666.229868.peg.1076 CDS CM001794.1 1459774 1463379 1 + 3606 Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) Methionine Degradation;
Pyruvate:ferredoxin oxidoreductase
fig|6666666.229868.peg.1077 CDS CM001794.1 1464500 1463634 -2 - 867 Transposase - none -
fig|6666666.229868.peg.1078 CDS CM001794.1 1465360 1464650 -1 - 711 Similar to tRNA pseudouridine synthase C, group TruC1 RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229868.peg.1079 CDS CM001794.1 1465499 1466686 2 + 1188 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Glycine Biosynthesis;
Glycine and Serine Utilization
fig|6666666.229868.peg.1080 CDS CM001794.1 1466771 1467268 2 + 498 dCMP deaminase (EC 3.5.4.12) - none -
fig|6666666.229868.peg.1081 CDS CM001794.1 1468720 1467302 -1 - 1419 Threonine synthase (EC 4.2.3.1) - none -
fig|6666666.229868.peg.1082 CDS CM001794.1 1468867 1470198 1 + 1332 Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) Deoxyribose and Deoxynucleoside Catabolism;
pyrimidine conversions
fig|6666666.229868.peg.1083 CDS CM001794.1 1470218 1472350 2 + 2133 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229868.peg.1084 CDS CM001794.1 1472363 1473313 2 + 951 M23/M37 peptidase domain protein - none -
fig|6666666.229868.peg.1085 CDS CM001794.1 1473390 1474937 3 + 1548 hypothetical protein - none -
fig|6666666.229868.peg.1086 CDS CM001794.1 1474963 1475364 1 + 402 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229868.peg.1087 CDS CM001794.1 1477113 1475458 -3 - 1656 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) - none -
fig|6666666.229868.peg.1088 CDS CM001794.1 1478409 1477165 -3 - 1245 lipoprotein, putative - none -
fig|6666666.229868.peg.1089 CDS CM001794.1 1480599 1478419 -3 - 2181 hypothetical protein - none -
fig|6666666.229868.peg.1090 CDS CM001794.1 1481262 1480606 -3 - 657 hypothetical protein - none -
fig|6666666.229868.peg.1091 CDS CM001794.1 1481351 1483474 2 + 2124 COG1306 predicted glycoside hydrolase - none -
fig|6666666.229868.peg.1092 CDS CM001794.1 1483474 1484511 1 + 1038 PAP2 family protein - none -
fig|6666666.229868.peg.1093 CDS CM001794.1 1484498 1485916 2 + 1419 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229868.peg.1094 CDS CM001794.1 1487544 1485922 -3 - 1623 Voltage-gated chloride channel family protein - none -
fig|6666666.229868.peg.1095 CDS CM001794.1 1487770 1487651 -1 - 120 hypothetical protein - none -
fig|6666666.229868.peg.1096 CDS CM001794.1 1487743 1489818 1 + 2076 Kinesin-related protein - none -
fig|6666666.229868.peg.1097 CDS CM001794.1 1490805 1491125 3 + 321 hypothetical protein - none -
fig|6666666.229868.peg.1098 CDS CM001794.1 1493070 1492039 -3 - 1032 Mobile element protein - none -
fig|6666666.229868.peg.1099 CDS CM001794.1 1493347 1493234 -1 - 114 hypothetical protein - none -
fig|6666666.229868.peg.1100 CDS CM001794.1 1494560 1493526 -2 - 1035 alpha/beta hydrolase fold - none -
fig|6666666.229868.peg.1101 CDS CM001794.1 1495233 1494595 -3 - 639 Transcriptional regulator, TetR family - none -
fig|6666666.229868.peg.1102 CDS CM001794.1 1496081 1495689 -2 - 393 hypothetical protein - none -
fig|6666666.229868.peg.1103 CDS CM001794.1 1496330 1499074 2 + 2745 Formate dehydrogenase-O, major subunit (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229868.peg.1104 CDS CM001794.1 1499093 1499434 2 + 342 [NiFe] hydrogenase nickel incorporation protein HypA G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229868.peg.1105 CDS CM001794.1 1499459 1500121 2 + 663 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229868.peg.1106 CDS CM001794.1 1500219 1500926 3 + 708 hypothetical protein - none -
fig|6666666.229868.peg.1107 CDS CM001794.1 1500961 1501641 1 + 681 probable metal-dependent peptidase - none -
fig|6666666.229868.peg.1108 CDS CM001794.1 1502435 1501644 -2 - 792 NOL1/NOP2/sun family protein - none -
fig|6666666.229868.peg.1109 CDS CM001794.1 1503034 1502480 -1 - 555 Aminoglycoside N6@1-acetyltransferase (EC 2.3.1.82) Aminoglycoside adenylyltransferases
fig|6666666.229868.peg.1110 CDS CM001794.1 1503935 1503330 -2 - 606 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.1111 CDS CM001794.1 1505459 1503951 -2 - 1509 Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.1112 CDS CM001794.1 1506310 1505471 -1 - 840 Transmembrane component BL0694 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.1113 CDS CM001794.1 1506397 1506981 1 + 585 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.229868.peg.1114 CDS CM001794.1 1507008 1507208 3 + 201 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins)
fig|6666666.229868.peg.1115 CDS CM001794.1 1507239 1507598 3 + 360 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins)
fig|6666666.229868.peg.1116 CDS CM001794.1 1507600 1508064 1 + 465 FIG01188887: hypothetical protein - none -
fig|6666666.229868.peg.1117 CDS CM001794.1 1508070 1508369 3 + 300 FIG01187637: hypothetical protein - none -
fig|6666666.229868.peg.1118 CDS CM001794.1 1508366 1508833 2 + 468 FIG01188183: hypothetical protein - none -
fig|6666666.229868.peg.1119 CDS CM001794.1 1508876 1509919 2 + 1044 FIG01188514: hypothetical protein - none -
fig|6666666.229868.peg.1120 CDS CM001794.1 1509919 1511208 1 + 1290 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229868.peg.1121 CDS CM001794.1 1511227 1512576 1 + 1350 OmpA family protein - none -
fig|6666666.229868.peg.1122 CDS CM001794.1 1512677 1513138 2 + 462 Uncharacterized protein TP_0625 - none -
fig|6666666.229868.peg.1123 CDS CM001794.1 1514064 1513150 -3 - 915 Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23); putative Triacylglycerol metabolism;
Triacylglycerol metabolism
fig|6666666.229868.peg.1124 CDS CM001794.1 1514249 1515349 2 + 1101 serine/threonine kinase - none -
fig|6666666.229868.peg.1125 CDS CM001794.1 1515428 1516723 2 + 1296 Inner membrane protein - none -
fig|6666666.229868.peg.1126 CDS CM001794.1 1519017 1516720 -3 - 2298 Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C CBSS-316273.3.peg.227;
Peptidoglycan Biosynthesis
fig|6666666.229868.peg.1127 CDS CM001794.1 1519178 1521199 2 + 2022 Protease II (EC 3.4.21.83) - none -
fig|6666666.229868.peg.1128 CDS CM001794.1 1522067 1521282 -2 - 786 hypothetical protein - none -
fig|6666666.229868.peg.1129 CDS CM001794.1 1527727 1522169 -1 - 5559 Alpha-2-macroglobulin CBSS-316273.3.peg.227
fig|6666666.229868.peg.1130 CDS CM001794.1 1528164 1528991 3 + 828 Signal transduction histidine kinase - none -
fig|6666666.229868.peg.1131 CDS CM001794.1 1529139 1529852 3 + 714 Transmembrane component NikQ of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229868.peg.1132 CDS CM001794.1 1529840 1530625 2 + 786 ATPase component NikO of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229868.peg.1133 CDS CM001794.1 1530698 1531291 2 + 594 Substrate-specific component NikM of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229868.peg.1134 CDS CM001794.1 1531323 1531808 3 + 486 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229868.peg.1135 CDS CM001794.1 1532210 1531854 -2 - 357 membrane protein, putative - none -
fig|6666666.229868.peg.1136 CDS CM001794.1 1533144 1532230 -3 - 915 membrane protein, putative - none -
fig|6666666.229868.peg.1137 CDS CM001794.1 1533570 1533169 -3 - 402 VapC toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.1138 CDS CM001794.1 1533800 1533570 -2 - 231 VapB protein (antitoxin to VapC) Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.1139 CDS CM001794.1 1534622 1533882 -2 - 741 Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) Protein degradation
fig|6666666.229868.peg.1140 CDS CM001794.1 1537007 1534650 -2 - 2358 ATP-dependent Clp protease ATP-binding subunit ClpA ClpAS cluster;
Proteolysis in bacteria, ATP-dependent;
Ribosome recycling related cluster
fig|6666666.229868.peg.1141 CDS CM001794.1 1537387 1537004 -1 - 384 ATP-dependent Clp protease adaptor protein ClpS ClpAS cluster;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229868.peg.1142 CDS CM001794.1 1537473 1538657 3 + 1185 DHH superfamily protein - none -
fig|6666666.229868.peg.1143 CDS CM001794.1 1538654 1539271 2 + 618 FIG053235: Diacylglucosamine hydrolase like - none -
fig|6666666.229868.peg.1144 CDS CM001794.1 1539389 1540678 2 + 1290 Glycine reductase component B beta subunit (EC 1.21.4.2) / Glycine reductase component B alpha subunit (EC 1.21.4.2) Glycine reductase, sarcosine reductase and betaine reductase;
Glycine reductase, sarcosine reductase and betaine reductase
fig|6666666.229868.peg.1146 CDS CM001794.1 1540690 1541985 1 + 1296 Glycine reductase component B gamma subunit (EC 1.21.4.2) @ selenocysteine-containing Glycine reductase, sarcosine reductase and betaine reductase
fig|6666666.229868.peg.1148 CDS CM001794.1 1542280 1544391 1 + 2112 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229868.peg.1149 CDS CM001794.1 1545689 1544400 -2 - 1290 T. pallidum predicted coding region TP0548 - none -
fig|6666666.229868.peg.1150 CDS CM001794.1 1545837 1548767 3 + 2931 T. pallidum predicted coding region TP0855 - none -
fig|6666666.229868.peg.1151 CDS CM001794.1 1548785 1553365 2 + 4581 FIG01187070: hypothetical protein - none -
fig|6666666.229868.peg.1152 CDS CM001794.1 1553370 1554155 3 + 786 ABC-type multidrug transport system, ATPase component - none -
fig|6666666.229868.peg.1153 CDS CM001794.1 1554133 1554879 1 + 747 gliding motility protein GldF - none -
fig|6666666.229868.peg.1154 CDS CM001794.1 1554876 1556363 3 + 1488 gliding motility protein GldG - none -
fig|6666666.229868.peg.1155 CDS CM001794.1 1556360 1557274 2 + 915 hypothetical protein - none -
fig|6666666.229868.peg.1156 CDS CM001794.1 1558166 1557264 -2 - 903 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis
fig|6666666.229868.peg.1157 CDS CM001794.1 1558258 1559970 1 + 1713 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229868.peg.1158 CDS CM001794.1 1560050 1560643 2 + 594 hypothetical protein - none -
fig|6666666.229868.peg.1159 CDS CM001794.1 1560671 1561720 2 + 1050 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.229868.peg.1160 CDS CM001794.1 1561926 1564415 3 + 2490 antigen, putative - none -
fig|6666666.229868.peg.1161 CDS CM001794.1 1564425 1565423 3 + 999 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) in lipid-linked oligosaccharide synthesis cluster - none -
fig|6666666.229868.peg.1162 CDS CM001794.1 1566678 1565467 -3 - 1212 alternate gene name: yzbB - none -
fig|6666666.229868.peg.1163 CDS CM001794.1 1568615 1566675 -2 - 1941 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.229868.peg.1164 CDS CM001794.1 1568609 1568851 2 + 243 hypothetical protein - none -
fig|6666666.229868.peg.1165 CDS CM001794.1 1568880 1569458 3 + 579 hypothetical protein - none -
fig|6666666.229868.peg.1166 CDS CM001794.1 1570315 1569476 -1 - 840 amino acid ABC transporter, amino acid-binding protein - none -
fig|6666666.229868.peg.1167 CDS CM001794.1 1571165 1570332 -2 - 834 amino acid ABC transporter, amino acid-binding protein - none -
fig|6666666.229868.peg.1168 CDS CM001794.1 1571285 1572358 2 + 1074 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229868.peg.1169 CDS CM001794.1 1572358 1573689 1 + 1332 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229868.peg.1170 CDS CM001794.1 1574127 1573768 -3 - 360 dnaK suppressor, putative - none -
fig|6666666.229868.peg.1171 CDS CM001794.1 1574235 1574453 3 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229868.peg.1172 CDS CM001794.1 1575012 1574494 -3 - 519 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229868.peg.1173 CDS CM001794.1 1575707 1575012 -2 - 696 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229868.peg.1174 CDS CM001794.1 1576495 1575740 -1 - 756 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Bacteria
fig|6666666.229868.peg.1175 CDS CM001794.1 1576777 1577328 1 + 552 Anti-sigma F factor antagonist (spoIIAA-2); Anti-sigma B factor antagonist RsbV SigmaB stress responce regulation
fig|6666666.229868.peg.1176 CDS CM001794.1 1578362 1577442 -2 - 921 T. pallidum predicted coding region TP0832 - none -
fig|6666666.229868.peg.1177 CDS CM001794.1 1578457 1580892 1 + 2436 Cytidylate kinase (EC 2.7.4.25) / SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
pyrimidine conversions
fig|6666666.229868.peg.1178 CDS CM001794.1 1580906 1582423 2 + 1518 Response regulator of zinc sigma-54-dependent two-component system Zinc resistance
fig|6666666.229868.peg.1179 CDS CM001794.1 1582425 1583153 3 + 729 TPR domain protein - none -
fig|6666666.229868.peg.1180 CDS CM001794.1 1583206 1583871 1 + 666 hypothetical protein - none -
fig|6666666.229868.peg.1181 CDS CM001794.1 1583934 1585412 3 + 1479 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.229868.peg.1182 CDS CM001794.1 1585424 1588438 2 + 3015 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) - none -
fig|6666666.229868.peg.1183 CDS CM001794.1 1589478 1588435 -3 - 1044 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229868.peg.1184 CDS CM001794.1 1590715 1589468 -1 - 1248 TPR domain protein - none -
fig|6666666.229868.peg.1185 CDS CM001794.1 1591073 1590771 -2 - 303 hypothetical protein - none -
fig|6666666.229868.peg.1186 CDS CM001794.1 1591645 1591373 -1 - 273 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229868.peg.1187 CDS CM001794.1 1592851 1591754 -1 - 1098 hypothetical protein - none -
fig|6666666.229868.peg.1188 CDS CM001794.1 1593254 1592877 -2 - 378 Endoribonuclease L-PSP CBSS-176299.4.peg.1996A
fig|6666666.229868.peg.1189 CDS CM001794.1 1595874 1593373 -3 - 2502 antigen, putative - none -
fig|6666666.229868.peg.1190 CDS CM001794.1 1597783 1595963 -1 - 1821 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229868.peg.1191 CDS CM001794.1 1598031 1597795 -3 - 237 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229868.peg.1192 CDS CM001794.1 1598244 1598471 3 + 228 FeoA family protein - none -
fig|6666666.229868.peg.1193 CDS CM001794.1 1598495 1598719 2 + 225 ferrous iron transport protein A - none -
fig|6666666.229868.peg.1194 CDS CM001794.1 1598723 1601557 2 + 2835 Ferrous iron transport protein B - none -
fig|6666666.229868.peg.1195 CDS CM001794.1 1601643 1602185 3 + 543 hypothetical protein - none -
fig|6666666.229868.peg.1196 CDS CM001794.1 1602195 1603208 3 + 1014 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229868.peg.1197 CDS CM001794.1 1603526 1603678 2 + 153 hypothetical protein - none -
fig|6666666.229868.peg.1198 CDS CM001794.1 1603815 1604633 3 + 819 Predicted cobalt ABC transporter periplasmic component Transport of Nickel and Cobalt
fig|6666666.229868.peg.1199 CDS CM001794.1 1604644 1604829 1 + 186 hypothetical protein - none -
fig|6666666.229868.peg.1200 CDS CM001794.1 1604917 1606128 1 + 1212 hemin-binding protein B - none -
fig|6666666.229868.peg.1201 CDS CM001794.1 1606218 1607429 3 + 1212 hemin-binding protein B - none -
fig|6666666.229868.peg.1202 CDS CM001794.1 1607463 1607801 3 + 339 hypothetical protein - none -
fig|6666666.229868.peg.1203 CDS CM001794.1 1608297 1607863 -3 - 435 Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 - none -
fig|6666666.229868.peg.1204 CDS CM001794.1 1609534 1608332 -1 - 1203 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229868.peg.1205 CDS CM001794.1 1609917 1610273 3 + 357 hypothetical protein - none -
fig|6666666.229868.peg.1206 CDS CM001794.1 1612260 1610668 -3 - 1593 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.1207 CDS CM001794.1 1613713 1612310 -1 - 1404 hypothetical protein - none -
fig|6666666.229868.peg.1208 CDS CM001794.1 1613823 1614116 3 + 294 hypothetical protein - none -
fig|6666666.229868.peg.1209 CDS CM001794.1 1614068 1614190 2 + 123 hypothetical protein - none -
fig|6666666.229868.peg.1210 CDS CM001794.1 1614282 1615244 3 + 963 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229868.peg.1211 CDS CM001794.1 1615241 1615561 2 + 321 hypothetical protein - none -
fig|6666666.229868.peg.1212 CDS CM001794.1 1615558 1617117 1 + 1560 Uncharacterized protein TP_0577 - none -
fig|6666666.229868.peg.1213 CDS CM001794.1 1617107 1617985 2 + 879 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229868.peg.1214 CDS CM001794.1 1617986 1618708 2 + 723 FIG01187116: hypothetical protein - none -
fig|6666666.229868.peg.1215 CDS CM001794.1 1618710 1619990 3 + 1281 Lipoprotein releasing system transmembrane protein LolC Lipoprotein sorting system
fig|6666666.229868.peg.1216 CDS CM001794.1 1619983 1620663 1 + 681 Lipoprotein releasing system ATP-binding protein LolD Lipoprotein sorting system
fig|6666666.229868.peg.1217 CDS CM001794.1 1620660 1622006 3 + 1347 Lipoprotein releasing system transmembrane protein LolE Lipoprotein sorting system
fig|6666666.229868.peg.1218 CDS CM001794.1 1622003 1622500 2 + 498 Nucleotide excision repair protein, with UvrB/UvrC motif Proteolysis in bacteria, ATP-dependent
fig|6666666.229868.peg.1219 CDS CM001794.1 1622484 1623557 3 + 1074 ATP:guanido phosphotransferase - none -
fig|6666666.229868.peg.1220 CDS CM001794.1 1623566 1626064 2 + 2499 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229868.peg.1221 CDS CM001794.1 1627353 1626079 -3 - 1275 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.229868.peg.1222 CDS CM001794.1 1628568 1627411 -3 - 1158 glycosyl transferase, group 1 family protein - none -
fig|6666666.229868.peg.1223 CDS CM001794.1 1628860 1628744 -1 - 117 hypothetical protein - none -
fig|6666666.229868.peg.1224 CDS CM001794.1 1628877 1629689 3 + 813 hypothetical protein - none -
fig|6666666.229868.peg.1225 CDS CM001794.1 1630556 1629771 -2 - 786 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229868.peg.1226 CDS CM001794.1 1630781 1631713 2 + 933 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229868.peg.1227 CDS CM001794.1 1635923 1631829 -2 - 4095 hypothetical protein - none -
fig|6666666.229868.peg.1228 CDS CM001794.1 1636190 1636408 2 + 219 hypothetical protein - none -
fig|6666666.229868.peg.1229 CDS CM001794.1 1636462 1636587 1 + 126 hypothetical protein - none -
fig|6666666.229868.peg.1230 CDS CM001794.1 1636634 1636804 2 + 171 hypothetical protein - none -
fig|6666666.229868.peg.1231 CDS CM001794.1 1636807 1637640 1 + 834 hypothetical protein - none -
fig|6666666.229868.peg.1232 CDS CM001794.1 1637624 1638685 2 + 1062 YD repeat protein - none -
fig|6666666.229868.peg.1233 CDS CM001794.1 1639141 1640244 1 + 1104 YD repeat protein - none -
fig|6666666.229868.peg.1234 CDS CM001794.1 1640248 1640856 1 + 609 hypothetical protein - none -
fig|6666666.229868.peg.1235 CDS CM001794.1 1640975 1641841 2 + 867 YD repeat protein - none -
fig|6666666.229868.peg.1236 CDS CM001794.1 1641838 1642950 1 + 1113 Tetratricopeptide repeat family protein - none -
fig|6666666.229868.peg.1237 CDS CM001794.1 1643229 1643570 3 + 342 YD repeat protein - none -
fig|6666666.229868.peg.1238 CDS CM001794.1 1643845 1644219 1 + 375 membrane protein, putative - none -
fig|6666666.229868.peg.1239 CDS CM001794.1 1644347 1645408 2 + 1062 lipoprotein, putative - none -
fig|6666666.229868.peg.1240 CDS CM001794.1 1645700 1646821 2 + 1122 lipoprotein, putative - none -
fig|6666666.229868.peg.1241 CDS CM001794.1 1649125 1647659 -1 - 1467 FIG01187443: hypothetical protein - none -
fig|6666666.229868.peg.1242 CDS CM001794.1 1649886 1649371 -3 - 516 hypothetical protein - none -
fig|6666666.229868.peg.1243 CDS CM001794.1 1649855 1649977 2 + 123 hypothetical protein - none -
fig|6666666.229868.peg.1244 CDS CM001794.1 1650983 1650198 -2 - 786 hypothetical protein - none -
fig|6666666.229868.peg.1245 CDS CM001794.1 1653160 1651403 -1 - 1758 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229868.peg.1246 CDS CM001794.1 1654919 1653177 -2 - 1743 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229868.peg.1247 CDS CM001794.1 1657317 1654948 -3 - 2370 Predicted exporter of the RND superfamily - none -
fig|6666666.229868.peg.1248 CDS CM001794.1 1658062 1657409 -1 - 654 Transcriptional regulator, TetR family - none -
fig|6666666.229868.peg.1249 CDS CM001794.1 1658194 1658790 1 + 597 hypothetical protein - none -
fig|6666666.229868.peg.1250 CDS CM001794.1 1658821 1660614 1 + 1794 Oligoendopeptidase F (EC 3.4.24.-) - none -
fig|6666666.229868.peg.1251 CDS CM001794.1 1662492 1660747 -3 - 1746 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.1252 CDS CM001794.1 1663243 1662590 -1 - 654 DNA polymerase III domain protein - none -
fig|6666666.229868.peg.1253 CDS CM001794.1 1665006 1663243 -3 - 1764 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.229868.peg.1254 CDS CM001794.1 1665511 1665131 -1 - 381 hypothetical protein - none -
fig|6666666.229868.peg.1255 CDS CM001794.1 1666064 1665504 -2 - 561 hypothetical protein - none -
fig|6666666.229868.peg.1256 CDS CM001794.1 1667837 1666143 -2 - 1695 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.229868.peg.1257 CDS CM001794.1 1668045 1669436 3 + 1392 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229868.peg.1258 CDS CM001794.1 1670784 1669480 -3 - 1305 OmpA family protein - none -
fig|6666666.229868.peg.1259 CDS CM001794.1 1671102 1670794 -3 - 309 Transposase - none -
fig|6666666.229868.peg.1260 CDS CM001794.1 1671722 1671372 -2 - 351 hypothetical protein - none -
fig|6666666.229868.peg.1261 CDS CM001794.1 1671875 1674004 2 + 2130 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229868.peg.1262 CDS CM001794.1 1674028 1674786 1 + 759 acyltransferase family protein - none -
fig|6666666.229868.peg.1263 CDS CM001794.1 1677573 1674811 -3 - 2763 hypothetical protein - none -
fig|6666666.229868.peg.1264 CDS CM001794.1 1678009 1677599 -1 - 411 hypothetical protein - none -
fig|6666666.229868.peg.1265 CDS CM001794.1 1678213 1678010 -1 - 204 hypothetical protein - none -
fig|6666666.229868.peg.1266 CDS CM001794.1 1678179 1680089 3 + 1911 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229868.peg.1267 CDS CM001794.1 1680142 1682817 1 + 2676 hypothetical protein - none -
fig|6666666.229868.peg.1268 CDS CM001794.1 1682840 1684018 2 + 1179 hypothetical protein - none -
fig|6666666.229868.peg.1269 CDS CM001794.1 1684033 1686081 1 + 2049 lipoprotein, putative - none -
fig|6666666.229868.peg.1270 CDS CM001794.1 1686172 1687023 1 + 852 internalin-related protein - none -
fig|6666666.229868.peg.1271 CDS CM001794.1 1687271 1687402 2 + 132 hypothetical protein - none -
fig|6666666.229868.peg.1272 CDS CM001794.1 1687556 1687786 2 + 231 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.1273 CDS CM001794.1 1687783 1688040 1 + 258 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.1274 CDS CM001794.1 1688258 1688539 2 + 282 hypothetical protein - none -
fig|6666666.229868.peg.1275 CDS CM001794.1 1688508 1688861 3 + 354 conserved domain protein - none -
fig|6666666.229868.peg.1276 CDS CM001794.1 1690176 1689010 -3 - 1167 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229868.peg.1277 CDS CM001794.1 1691163 1690300 -3 - 864 Transposase - none -
fig|6666666.229868.peg.1278 CDS CM001794.1 1691418 1692593 3 + 1176 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229868.peg.1279 CDS CM001794.1 1692622 1693089 1 + 468 Colicin V production protein Colicin V and Bacteriocin Production Cluster
fig|6666666.229868.peg.1280 CDS CM001794.1 1693104 1694393 3 + 1290 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229868.peg.1281 CDS CM001794.1 1694390 1695637 2 + 1248 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY Flagellar motility
fig|6666666.229868.peg.1282 CDS CM001794.1 1695634 1697055 1 + 1422 Response regulator of zinc sigma-54-dependent two-component system Zinc resistance
fig|6666666.229868.peg.1283 CDS CM001794.1 1697042 1697641 2 + 600 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229868.peg.1284 CDS CM001794.1 1698527 1697631 -2 - 897 hypothetical protein - none -
fig|6666666.229868.peg.1285 CDS CM001794.1 1699811 1698534 -2 - 1278 trypsin domain/PDZ domain protein - none -
fig|6666666.229868.peg.1286 CDS CM001794.1 1699987 1701243 1 + 1257 Na+/H+ antiporter - none -
fig|6666666.229868.peg.1287 CDS CM001794.1 1701358 1703007 1 + 1650 Sodium-dependent phosphate transporter NhaA, NhaD and Sodium-dependent phosphate transporters;
Phosphate metabolism
fig|6666666.229868.peg.1288 CDS CM001794.1 1704834 1703062 -3 - 1773 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229868.peg.1289 CDS CM001794.1 1704970 1705245 1 + 276 hypothetical protein - none -
fig|6666666.229868.peg.1290 CDS CM001794.1 1705909 1705313 -1 - 597 hypothetical protein - none -
fig|6666666.229868.peg.1291 CDS CM001794.1 1706116 1706508 1 + 393 Phage-related protein - none -
fig|6666666.229868.peg.1292 CDS CM001794.1 1706853 1706545 -3 - 309 hypothetical protein - none -
fig|6666666.229868.peg.1293 CDS CM001794.1 1707116 1706850 -2 - 267 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.1294 CDS CM001794.1 1707281 1707913 2 + 633 putative transcription regulator - none -
fig|6666666.229868.peg.1295 CDS CM001794.1 1707916 1708560 1 + 645 hypothetical protein - none -
fig|6666666.229868.peg.1296 CDS CM001794.1 1708627 1709553 1 + 927 Ribonuclease Z (EC 3.1.26.11) tRNA processing
fig|6666666.229868.peg.1297 CDS CM001794.1 1709692 1710765 1 + 1074 Unspecified monosaccharide ABC transport system, substrate-binding component / CD4+ T cell-stimulating antigen, lipoprotein - none -
fig|6666666.229868.peg.1298 CDS CM001794.1 1710854 1712377 2 + 1524 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.1299 CDS CM001794.1 1712370 1713467 3 + 1098 ABC transporter, permease protein - none -
fig|6666666.229868.peg.1300 CDS CM001794.1 1713470 1714402 2 + 933 ABC transporter, permease protein - none -
fig|6666666.229868.peg.1301 CDS CM001794.1 1714425 1715501 3 + 1077 hypothetical protein - none -
fig|6666666.229868.peg.1302 CDS CM001794.1 1715516 1715842 2 + 327 hypothetical protein - none -
fig|6666666.229868.peg.1303 CDS CM001794.1 1716470 1715913 -2 - 558 hypothetical protein - none -
fig|6666666.229868.peg.1304 CDS CM001794.1 1716898 1717518 1 + 621 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.229868.peg.1305 CDS CM001794.1 1717669 1720449 1 + 2781 hypothetical protein - none -
fig|6666666.229868.peg.1306 CDS CM001794.1 1720446 1721510 3 + 1065 hypothetical protein - none -
fig|6666666.229868.peg.1307 CDS CM001794.1 1722307 1721549 -1 - 759 hypothetical protein - none -
fig|6666666.229868.peg.1308 CDS CM001794.1 1722454 1723335 1 + 882 hypothetical protein - none -
fig|6666666.229868.peg.1309 CDS CM001794.1 1723820 1723506 -2 - 315 hypothetical protein - none -
fig|6666666.229868.peg.1310 CDS CM001794.1 1724206 1727430 1 + 3225 lipoprotein, putative - none -
fig|6666666.229868.peg.1311 CDS CM001794.1 1727500 1728048 1 + 549 hypothetical protein - none -
fig|6666666.229868.peg.1312 CDS CM001794.1 1728045 1729682 3 + 1638 internalin-related protein - none -
fig|6666666.229868.peg.1313 CDS CM001794.1 1729854 1729738 -3 - 117 hypothetical protein - none -
fig|6666666.229868.peg.1314 CDS CM001794.1 1730312 1730542 2 + 231 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.1315 CDS CM001794.1 1730549 1730806 2 + 258 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.1316 CDS CM001794.1 1731255 1731130 -3 - 126 hypothetical protein - none -
fig|6666666.229868.peg.1317 CDS CM001794.1 1731313 1732023 1 + 711 hypothetical protein - none -
fig|6666666.229868.peg.1318 CDS CM001794.1 1732614 1732204 -3 - 411 Cytidine deaminase (EC 3.5.4.5) pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229868.peg.1319 CDS CM001794.1 1732638 1733762 3 + 1125 Uncharacterized protein TP_0783 - none -
fig|6666666.229868.peg.1320 CDS CM001794.1 1733763 1734620 3 + 858 T. pallidum predicted coding region TP0782 - none -
fig|6666666.229868.peg.1321 CDS CM001794.1 1735396 1734641 -1 - 756 Xylose isomerase-like TIM barrel - none -
fig|6666666.229868.peg.1322 CDS CM001794.1 1737160 1735406 -1 - 1755 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229868.peg.1323 CDS CM001794.1 1738643 1737576 -2 - 1068 Heptaprenyl diphosphate synthase component I (EC 2.5.1.30) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229868.peg.1324 CDS CM001794.1 1739230 1738634 -1 - 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229868.peg.1325 CDS CM001794.1 1739317 1739442 1 + 126 hypothetical protein - none -
fig|6666666.229868.peg.1326 CDS CM001794.1 1739797 1739513 -1 - 285 hypothetical protein - none -
fig|6666666.229868.peg.1327 CDS CM001794.1 1740318 1739956 -3 - 363 hypothetical protein - none -
fig|6666666.229868.peg.1328 CDS CM001794.1 1740613 1741023 1 + 411 membrane protein, putative - none -
fig|6666666.229868.peg.1329 CDS CM001794.1 1741065 1741424 3 + 360 lipoprotein, putative - none -
fig|6666666.229868.peg.1330 CDS CM001794.1 1741452 1743023 3 + 1572 FIG01187572: hypothetical protein - none -
fig|6666666.229868.peg.1331 CDS CM001794.1 1742998 1743951 1 + 954 B. burgdorferi predicted coding region BB0665 - none -
fig|6666666.229868.peg.1332 CDS CM001794.1 1743948 1746578 3 + 2631 cytidylyltransferase domain protein - none -
fig|6666666.229868.peg.1333 CDS CM001794.1 1746575 1748065 2 + 1491 Glycerol kinase (EC 2.7.1.30) Glycerol and Glycerol-3-phosphate Uptake and Utilization;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229868.peg.1334 CDS CM001794.1 1748239 1749414 1 + 1176 NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) - none -
fig|6666666.229868.peg.1335 CDS CM001794.1 1749422 1750453 2 + 1032 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229868.peg.1336 CDS CM001794.1 1751531 1750524 -2 - 1008 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229868.peg.1337 CDS CM001794.1 1752165 1751533 -3 - 633 Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) Oxidative stress
fig|6666666.229868.peg.1338 CDS CM001794.1 1752554 1754494 2 + 1941 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Thiamin biosynthesis
fig|6666666.229868.peg.1339 CDS CM001794.1 1754498 1755322 2 + 825 Diadenylate cyclase spyDAC; Bacterial checkpoint controller DisA with nucleotide-binding domain Bacterial checkpoint-control-related cluster;
Bacterial checkpoint-control-related cluster
fig|6666666.229868.peg.1340 CDS CM001794.1 1755312 1756271 3 + 960 Uncharacterized secreted protein associated with spyDAC Bacterial checkpoint-control-related cluster
fig|6666666.229868.peg.1341 CDS CM001794.1 1756273 1756650 1 + 378 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) Fatty Acid Biosynthesis FASII
fig|6666666.229868.peg.1342 CDS CM001794.1 1757285 1756647 -2 - 639 membrane protein, putative - none -
fig|6666666.229868.peg.1343 CDS CM001794.1 1758154 1757306 -1 - 849 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.1344 CDS CM001794.1 1758367 1758170 -1 - 198 Transcriptional regulator, GntR family - none -
fig|6666666.229868.peg.1345 CDS CM001794.1 1758384 1758581 3 + 198 hypothetical protein - none -
fig|6666666.229868.peg.1346 CDS CM001794.1 1758703 1761471 1 + 2769 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229868.peg.1347 CDS CM001794.1 1761472 1762068 1 + 597 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.229868.peg.1348 CDS CM001794.1 1762088 1763689 2 + 1602 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.229868.peg.1349 CDS CM001794.1 1764580 1763696 -1 - 885 GTP-binding protein Era Bacterial Cell Division;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.229868.peg.1350 CDS CM001794.1 1765430 1764582 -2 - 849 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229868.peg.1351 CDS CM001794.1 1765576 1767381 1 + 1806 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229868.peg.1352 CDS CM001794.1 1768337 1767573 -2 - 765 hypothetical protein - none -
fig|6666666.229868.peg.1353 CDS CM001794.1 1768490 1768606 2 + 117 hypothetical protein - none -
fig|6666666.229868.peg.1354 CDS CM001794.1 1768658 1770046 2 + 1389 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229868.peg.1355 CDS CM001794.1 1770046 1770423 1 + 378 hypothetical protein - none -
fig|6666666.229868.peg.1356 CDS CM001794.1 1770413 1771054 2 + 642 TPR domain protein - none -
fig|6666666.229868.peg.1357 CDS CM001794.1 1771058 1772464 2 + 1407 tRNA-t(6)A37 methylthiotransferase Heat shock dnaK gene cluster extended;
Methylthiotransferases
fig|6666666.229868.peg.1358 CDS CM001794.1 1772528 1773670 2 + 1143 hypothetical protein - none -
fig|6666666.229868.peg.1359 CDS CM001794.1 1773702 1774625 3 + 924 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229868.peg.1360 CDS CM001794.1 1775949 1774666 -3 - 1284 Beta-galactosidase (EC 3.2.1.23) / Beta-glucosidase/6-phospho-beta-glucosidase Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229868.peg.1361 CDS CM001794.1 1776493 1775942 -1 - 552 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) ## SSU rRNA m(2)G966 CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229868.peg.1362 CDS CM001794.1 1776958 1776515 -1 - 444 hypothetical protein - none -
fig|6666666.229868.peg.1363 CDS CM001794.1 1777096 1778844 1 + 1749 COG0488: ATPase components of ABC transporters with duplicated ATPase domains - none -
fig|6666666.229868.peg.1364 CDS CM001794.1 1778834 1779583 2 + 750 hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229868.peg.1365 CDS CM001794.1 1779632 1781110 2 + 1479 Carboxyl-terminal protease (EC 3.4.21.102) Phosphoglycerate mutase protein family
fig|6666666.229868.peg.1366 CDS CM001794.1 1781110 1781883 1 + 774 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229868.peg.1367 CDS CM001794.1 1781864 1782604 2 + 741 N-acetylmannosaminyltransferase (EC 2.4.1.187) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229868.peg.1368 CDS CM001794.1 1782637 1783737 1 + 1101 hypothetical protein - none -
fig|6666666.229868.peg.1369 CDS CM001794.1 1785621 1786457 3 + 837 CAAX amino terminal protease family protein - none -
fig|6666666.229868.peg.1370 CDS CM001794.1 1786588 1786761 1 + 174 hypothetical protein - none -
fig|6666666.229868.peg.1371 CDS CM001794.1 1786920 1789937 3 + 3018 peptidase, M16 family - none -
fig|6666666.229868.peg.1372 CDS CM001794.1 1789970 1790506 2 + 537 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229868.peg.1373 CDS CM001794.1 1790499 1791104 3 + 606 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229868.peg.1374 CDS CM001794.1 1792171 1791128 -1 - 1044 Conserved domain protein - none -
fig|6666666.229868.peg.1375 CDS CM001794.1 1792401 1792213 -3 - 189 hypothetical protein - none -
fig|6666666.229868.peg.1376 CDS CM001794.1 1793081 1792551 -2 - 531 FIG04612: Integral membrane protein (putative) - none -
fig|6666666.229868.peg.1377 CDS CM001794.1 1794276 1793083 -3 - 1194 hypothetical protein - none -
fig|6666666.229868.peg.1378 CDS CM001794.1 1794601 1794287 -1 - 315 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.229868.peg.1379 CDS CM001794.1 1794833 1795354 2 + 522 FIG01186963: hypothetical protein - none -
fig|6666666.229868.peg.1380 CDS CM001794.1 1796100 1795357 -3 - 744 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229868.peg.1381 CDS CM001794.1 1796387 1796100 -2 - 288 hypothetical protein - none -
fig|6666666.229868.peg.1382 CDS CM001794.1 1796469 1796582 3 + 114 hypothetical protein - none -
fig|6666666.229868.peg.1383 CDS CM001794.1 1796569 1796892 1 + 324 Nucleotidyl transferase possibly involved in threonylcarbamoyladenosine formation - none -
fig|6666666.229868.peg.1384 CDS CM001794.1 1796882 1797223 2 + 342 FIG094328: hypothetical protein - none -
fig|6666666.229868.peg.1385 CDS CM001794.1 1797422 1797538 2 + 117 hypothetical protein - none -
fig|6666666.229868.peg.1386 CDS CM001794.1 1797638 1798390 2 + 753 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.1387 CDS CM001794.1 1798407 1799927 3 + 1521 ABC transporter, permease protein, putative - none -
fig|6666666.229868.peg.1388 CDS CM001794.1 1799942 1801276 2 + 1335 ABC transporter, permease protein, putative - none -
fig|6666666.229868.peg.1389 CDS CM001794.1 1801379 1802146 2 + 768 hypothetical protein - none -
fig|6666666.229868.peg.1390 CDS CM001794.1 1802148 1803611 3 + 1464 hypothetical protein - none -
fig|6666666.229868.peg.1391 CDS CM001794.1 1804083 1804340 3 + 258 hypothetical protein - none -
fig|6666666.229868.peg.1392 CDS CM001794.1 1804340 1804708 2 + 369 hypothetical protein - none -
fig|6666666.229868.peg.1393 CDS CM001794.1 1805032 1806312 1 + 1281 Integron integrase IntIPac Integrons
fig|6666666.229868.peg.1394 CDS CM001794.1 1806835 1807080 1 + 246 Prevent-host-death family protein - none -
fig|6666666.229868.peg.1395 CDS CM001794.1 1807080 1807400 3 + 321 Death on curing protein, Doc toxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.229868.peg.1396 CDS CM001794.1 1807818 1808105 3 + 288 hypothetical protein - none -
fig|6666666.229868.peg.1397 CDS CM001794.1 1808098 1808355 1 + 258 hypothetical protein - none -
fig|6666666.229868.peg.1398 CDS CM001794.1 1808573 1808707 2 + 135 hypothetical protein - none -
fig|6666666.229868.peg.1399 CDS CM001794.1 1810069 1811094 1 + 1026 hypothetical protein - none -
fig|6666666.229868.peg.1400 CDS CM001794.1 1811252 1811743 2 + 492 hypothetical protein - none -
fig|6666666.229868.peg.1401 CDS CM001794.1 1812095 1812739 2 + 645 hypothetical protein - none -
fig|6666666.229868.peg.1402 CDS CM001794.1 1813892 1815553 2 + 1662 hypothetical protein - none -
fig|6666666.229868.peg.1403 CDS CM001794.1 1815685 1816356 1 + 672 hypothetical protein - none -
fig|6666666.229868.peg.1404 CDS CM001794.1 1816543 1817481 1 + 939 hypothetical protein - none -
fig|6666666.229868.peg.1405 CDS CM001794.1 1817585 1818466 2 + 882 hypothetical protein - none -
fig|6666666.229868.peg.1406 CDS CM001794.1 1818539 1819180 2 + 642 hypothetical protein - none -
fig|6666666.229868.peg.1407 CDS CM001794.1 1819477 1820343 1 + 867 hypothetical protein - none -
fig|6666666.229868.peg.1408 CDS CM001794.1 1821341 1821511 2 + 171 transcriptional regulator, AbrB family - none -
fig|6666666.229868.peg.1409 CDS CM001794.1 1821508 1821918 1 + 411 hypothetical protein - none -
fig|6666666.229868.peg.1410 CDS CM001794.1 1821999 1822862 3 + 864 hypothetical protein - none -
fig|6666666.229868.peg.1411 CDS CM001794.1 1824040 1824279 1 + 240 hypothetical protein - none -
fig|6666666.229868.peg.1412 CDS CM001794.1 1824287 1824562 2 + 276 hypothetical protein - none -
fig|6666666.229868.peg.1413 CDS CM001794.1 1824657 1824848 3 + 192 hypothetical protein - none -
fig|6666666.229868.peg.1414 CDS CM001794.1 1824845 1825486 2 + 642 hypothetical protein - none -
fig|6666666.229868.peg.1415 CDS CM001794.1 1825709 1826401 2 + 693 hypothetical protein - none -
fig|6666666.229868.peg.1416 CDS CM001794.1 1827020 1827367 2 + 348 hypothetical protein - none -
fig|6666666.229868.peg.1417 CDS CM001794.1 1828472 1829179 2 + 708 hypothetical protein - none -
fig|6666666.229868.peg.1418 CDS CM001794.1 1829281 1829922 1 + 642 hypothetical protein - none -
fig|6666666.229868.peg.1419 CDS CM001794.1 1830413 1830562 2 + 150 hypothetical protein - none -
fig|6666666.229868.peg.1420 CDS CM001794.1 1830573 1830692 3 + 120 hypothetical protein - none -
fig|6666666.229868.peg.1421 CDS CM001794.1 1831083 1831535 3 + 453 conserved domain protein - none -
fig|6666666.229868.peg.1422 CDS CM001794.1 1831659 1831856 3 + 198 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.229868.peg.1423 CDS CM001794.1 1831857 1832576 3 + 720 hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229868.peg.1424 CDS CM001794.1 1832591 1832881 2 + 291 hypothetical protein - none -
fig|6666666.229868.peg.1425 CDS CM001794.1 1832893 1833558 1 + 666 HD domain protein - none -
fig|6666666.229868.peg.1426 CDS CM001794.1 1833597 1834172 3 + 576 hypothetical protein - none -
fig|6666666.229868.peg.1427 CDS CM001794.1 1834197 1834796 3 + 600 hypothetical protein - none -
fig|6666666.229868.peg.1428 CDS CM001794.1 1834843 1835418 1 + 576 hypothetical protein - none -
fig|6666666.229868.peg.1429 CDS CM001794.1 1835869 1835756 -1 - 114 hypothetical protein - none -
fig|6666666.229868.peg.1430 CDS CM001794.1 1835890 1836276 1 + 387 Superoxide reductase (EC 1.15.1.2) Oxidative stress;
Rubrerythrin
fig|6666666.229868.peg.1431 CDS CM001794.1 1836360 1837379 3 + 1020 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.229868.peg.1432 CDS CM001794.1 1837516 1837827 1 + 312 LSU ribosomal protein L21p CBSS-176279.3.peg.868
fig|6666666.229868.peg.1433 CDS CM001794.1 1837833 1838219 3 + 387 FIG01187033: hypothetical protein - none -
fig|6666666.229868.peg.1434 CDS CM001794.1 1838249 1838500 2 + 252 LSU ribosomal protein L27p CBSS-176279.3.peg.868
fig|6666666.229868.peg.1435 CDS CM001794.1 1838578 1839726 1 + 1149 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229868.peg.1436 CDS CM001794.1 1839723 1840946 3 + 1224 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) / Hydrolase (HAD superfamily), YqeK NAD and NADP cofactor biosynthesis global
fig|6666666.229868.peg.1437 CDS CM001794.1 1840943 1842184 2 + 1242 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily S (as in PMID19099556) Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
fig|6666666.229868.peg.1438 CDS CM001794.1 1842184 1842543 1 + 360 Iojap protein - none -
fig|6666666.229868.peg.1439 CDS CM001794.1 1842567 1843154 3 + 588 chromate transport protein - none -
fig|6666666.229868.peg.1440 CDS CM001794.1 1843154 1843717 2 + 564 chromate transport protein - none -
fig|6666666.229868.peg.1441 CDS CM001794.1 1843974 1845290 3 + 1317 hypothetical protein - none -
fig|6666666.229868.peg.1442 CDS CM001794.1 1845429 1846145 3 + 717 hypothetical protein - none -
fig|6666666.229868.peg.1443 CDS CM001794.1 1846217 1846339 2 + 123 hypothetical protein - none -
fig|6666666.229868.peg.1444 CDS CM001794.1 1846580 1846329 -2 - 252 hypothetical protein - none -
fig|6666666.229868.peg.1445 CDS CM001794.1 1847242 1846586 -1 - 657 putative phage repressor - none -
fig|6666666.229868.peg.1446 CDS CM001794.1 1847797 1847516 -1 - 282 hypothetical protein - none -
fig|6666666.229868.peg.1447 CDS CM001794.1 1848084 1848416 3 + 333 hypothetical protein - none -
fig|6666666.229868.peg.1448 CDS CM001794.1 1848419 1849156 2 + 738 Phage-related protein - none -
fig|6666666.229868.peg.1449 CDS CM001794.1 1849281 1849496 3 + 216 hypothetical protein - none -
fig|6666666.229868.peg.1450 CDS CM001794.1 1849575 1849772 3 + 198 hypothetical protein - none -
fig|6666666.229868.peg.1451 CDS CM001794.1 1849773 1850651 3 + 879 hypothetical protein - none -
fig|6666666.229868.peg.1452 CDS CM001794.1 1850704 1850913 1 + 210 hypothetical protein - none -
fig|6666666.229868.peg.1453 CDS CM001794.1 1850918 1851223 2 + 306 hypothetical protein - none -
fig|6666666.229868.peg.1454 CDS CM001794.1 1851478 1851663 1 + 186 hypothetical protein - none -
fig|6666666.229868.peg.1455 CDS CM001794.1 1851669 1852616 3 + 948 Phage replication initiation protein Phage replication
fig|6666666.229868.peg.1456 CDS CM001794.1 1852613 1853350 2 + 738 Bacteriophage-encoded homolog of DNA replication protein DnaC - none -
fig|6666666.229868.peg.1457 CDS CM001794.1 1853363 1853482 2 + 120 hypothetical protein - none -
fig|6666666.229868.peg.1458 CDS CM001794.1 1853479 1853814 1 + 336 hypothetical protein - none -
fig|6666666.229868.peg.1459 CDS CM001794.1 1853789 1854214 2 + 426 Holin - none -
fig|6666666.229868.peg.1460 CDS CM001794.1 1854351 1854884 3 + 534 hypothetical protein - none -
fig|6666666.229868.peg.1461 CDS CM001794.1 1854887 1856557 2 + 1671 Phage terminase large subunit Phage packaging machinery
fig|6666666.229868.peg.1462 CDS CM001794.1 1856594 1857877 2 + 1284 Phage portal protein Phage packaging machinery
fig|6666666.229868.peg.1463 CDS CM001794.1 1857910 1858722 1 + 813 Phage head maturation protease Phage capsid proteins
fig|6666666.229868.peg.1464 CDS CM001794.1 1858745 1859830 2 + 1086 hypothetical protein - none -
fig|6666666.229868.peg.1465 CDS CM001794.1 1859889 1860398 3 + 510 hypothetical protein - none -
fig|6666666.229868.peg.1466 CDS CM001794.1 1860399 1860854 3 + 456 hypothetical protein - none -
fig|6666666.229868.peg.1467 CDS CM001794.1 1860855 1861304 3 + 450 hypothetical protein - none -
fig|6666666.229868.peg.1468 CDS CM001794.1 1861340 1862335 2 + 996 hypothetical protein - none -
fig|6666666.229868.peg.1469 CDS CM001794.1 1862354 1862710 2 + 357 hypothetical protein - none -
fig|6666666.229868.peg.1470 CDS CM001794.1 1862803 1862955 1 + 153 hypothetical protein - none -
fig|6666666.229868.peg.1471 CDS CM001794.1 1862958 1865036 3 + 2079 Tail length tape measure protein - none -
fig|6666666.229868.peg.1472 CDS CM001794.1 1865037 1867544 3 + 2508 Phage tail fiber protein Phage tail fiber proteins
fig|6666666.229868.peg.1473 CDS CM001794.1 1867556 1868671 2 + 1116 hypothetical protein - none -
fig|6666666.229868.peg.1474 CDS CM001794.1 1868675 1870330 2 + 1656 hypothetical protein - none -
fig|6666666.229868.peg.1475 CDS CM001794.1 1870837 1870325 -1 - 513 hypothetical protein - none -
fig|6666666.229868.peg.1476 CDS CM001794.1 1871463 1870858 -3 - 606 hypothetical protein - none -
fig|6666666.229868.peg.1477 CDS CM001794.1 1872109 1871549 -1 - 561 hypothetical protein - none -
fig|6666666.229868.peg.1478 CDS CM001794.1 1872218 1872919 2 + 702 hypothetical protein - none -
fig|6666666.229868.peg.1479 CDS CM001794.1 1872943 1873359 1 + 417 hypothetical protein - none -
fig|6666666.229868.peg.1480 CDS CM001794.1 1873364 1873816 2 + 453 hypothetical protein - none -
fig|6666666.229868.peg.1481 CDS CM001794.1 1873820 1874122 2 + 303 membrane protein, putative - none -
fig|6666666.229868.peg.1482 CDS CM001794.1 1874694 1876544 3 + 1851 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.229868.peg.1483 CDS CM001794.1 1879356 1876816 -3 - 2541 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.229868.peg.1484 CDS CM001794.1 1879413 1879568 3 + 156 hypothetical protein - none -
fig|6666666.229868.peg.1485 CDS CM001794.1 1880635 1879571 -1 - 1065 tRNA-dependent lipid II--amino acid ligase tRNA-dependent amino acid transfers
fig|6666666.229868.peg.1486 CDS CM001794.1 1881612 1880701 -3 - 912 M23/M37 peptidase domain protein - none -
fig|6666666.229868.peg.1487 CDS CM001794.1 1882015 1881599 -1 - 417 hypothetical protein - none -
fig|6666666.229868.peg.1488 CDS CM001794.1 1882240 1882070 -1 - 171 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229868.peg.1489 CDS CM001794.1 1883537 1882767 -2 - 771 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229868.peg.1490 CDS CM001794.1 1884297 1883551 -3 - 747 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229868.peg.1491 CDS CM001794.1 1885120 1884284 -1 - 837 heat shock protein, putative - none -
fig|6666666.229868.peg.1492 CDS CM001794.1 1885258 1886661 1 + 1404 MFS transporter family protein - none -
fig|6666666.229868.peg.1493 CDS CM001794.1 1886648 1888450 2 + 1803 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229868.peg.1494 CDS CM001794.1 1888437 1888904 3 + 468 Glutathione peroxidase (EC 1.11.1.9) @ selenocysteine-containing Glutathione: Redox cycle
fig|6666666.229868.peg.1496 CDS CM001794.1 1888998 1889831 3 + 834 hypothetical protein - none -
fig|6666666.229868.peg.1497 CDS CM001794.1 1889838 1891379 3 + 1542 Carotenoid cis-trans isomerase (EC 5.2.-.-) - none -
fig|6666666.229868.peg.1498 CDS CM001794.1 1891372 1892535 1 + 1164 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Anaerobic respiratory reductases
fig|6666666.229868.peg.1499 CDS CM001794.1 1892558 1893484 2 + 927 hypothetical protein - none -
fig|6666666.229868.peg.1500 CDS CM001794.1 1893604 1895625 1 + 2022 hypothetical protein - none -
fig|6666666.229868.peg.1501 CDS CM001794.1 1895651 1896067 2 + 417 Bll2902 protein - none -
fig|6666666.229868.peg.1502 CDS CM001794.1 1897245 1896103 -3 - 1143 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229868.peg.1503 CDS CM001794.1 1897417 1898448 1 + 1032 conserved domain protein - none -
fig|6666666.229868.peg.1504 CDS CM001794.1 1898994 1898500 -3 - 495 hypothetical protein - none -
fig|6666666.229868.peg.1505 CDS CM001794.1 1900152 1899091 -3 - 1062 beta-hexosaminidase precursor - none -
fig|6666666.229868.peg.1506 CDS CM001794.1 1901756 1900185 -2 - 1572 GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2) / GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2) GMP synthase;
GMP synthase;
Purine conversions;
Purine conversions;
Purine salvage cluster;
Purine salvage cluster
fig|6666666.229868.peg.1507 CDS CM001794.1 1902532 1901882 -1 - 651 hypothetical protein - none -
fig|6666666.229868.peg.1508 CDS CM001794.1 1902785 1903162 2 + 378 glyoxalase family protein - none -
fig|6666666.229868.peg.1509 CDS CM001794.1 1903251 1904510 3 + 1260 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229868.peg.1510 CDS CM001794.1 1904517 1905530 3 + 1014 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229868.peg.1511 CDS CM001794.1 1905545 1906003 2 + 459 hypothetical protein - none -
fig|6666666.229868.peg.1512 CDS CM001794.1 1906098 1907147 3 + 1050 flagellar filament outer layer protein - none -
fig|6666666.229868.peg.1513 CDS CM001794.1 1907229 1908461 3 + 1233 RelA/SpoT domain protein - none -
fig|6666666.229868.peg.1514 CDS CM001794.1 1908579 1908797 3 + 219 SSU ribosomal protein S20p - none -
fig|6666666.229868.peg.1515 CDS CM001794.1 1908874 1909194 1 + 321 Integration host factor alpha/beta DNA structural proteins, bacterial
fig|6666666.229868.peg.1516 CDS CM001794.1 1909191 1910825 3 + 1635 Apolipoprotein N-acyltransferase (EC 2.3.1.-) Lipoprotein Biosynthesis
fig|6666666.229868.peg.1517 CDS CM001794.1 1910822 1911238 2 + 417 hypothetical protein - none -
fig|6666666.229868.peg.1518 CDS CM001794.1 1911260 1911856 2 + 597 Competence/damage-inducible protein CinA - none -
fig|6666666.229868.peg.1519 CDS CM001794.1 269084 268545 -2 - 540 hypothetical protein - none -
fig|6666666.229868.peg.1520 CDS CM001794.1 269923 269402 -1 - 522 internalin-related protein - none -
fig|6666666.229868.peg.1521 CDS CM001794.1 1913369 1912833 -2 - 537 hypothetical protein - none -
fig|6666666.229868.peg.1522 CDS CM001794.1 1913911 1913399 -1 - 513 hypothetical protein - none -
fig|6666666.229868.peg.1523 CDS CM001794.1 1915651 1915088 -1 - 564 hypothetical protein - none -
fig|6666666.229868.peg.1524 CDS CM001794.1 1916263 1915703 -1 - 561 hypothetical protein - none -
fig|6666666.229868.peg.1525 CDS CM001794.1 1917519 1916356 -3 - 1164 hypothetical protein - none -
fig|6666666.229868.peg.1526 CDS CM001794.1 1917753 1918487 3 + 735 hypothetical protein - none -
fig|6666666.229868.peg.1527 CDS CM001794.1 1918489 1919337 1 + 849 serine/threonine protein phosphatase - none -
fig|6666666.229868.peg.1528 CDS CM001794.1 1919414 1920157 2 + 744 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229868.peg.1529 CDS CM001794.1 1920172 1921653 1 + 1482 hypothetical protein - none -
fig|6666666.229868.peg.1530 CDS CM001794.1 1921673 1926175 2 + 4503 Activator of (R)-2-hydroxyglutaryl-CoA dehydratase - none -
fig|6666666.229868.peg.1531 CDS CM001794.1 1926451 1927233 1 + 783 hypothetical protein - none -
fig|6666666.229868.peg.1532 CDS CM001794.1 1927393 1928259 1 + 867 Transposase - none -
fig|6666666.229868.peg.1533 CDS CM001794.1 1928459 1929043 2 + 585 hypothetical protein - none -
fig|6666666.229868.peg.1534 CDS CM001794.1 1929111 1929869 3 + 759 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.1535 CDS CM001794.1 1929885 1931585 3 + 1701 membrane protein, putative - none -
fig|6666666.229868.peg.1536 CDS CM001794.1 1931634 1933916 3 + 2283 TPR domain protein, putative component of TonB system Ton and Tol transport systems
fig|6666666.229868.peg.1537 CDS CM001794.1 1933913 1935262 2 + 1350 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229868.peg.1538 CDS CM001794.1 1935362 1938325 2 + 2964 putative protein with GGDEF motif and GAF domain - none -
fig|6666666.229868.peg.1539 CDS CM001794.1 1938386 1938922 2 + 537 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229868.peg.1540 CDS CM001794.1 1939063 1940832 1 + 1770 V-type ATP synthase subunit A (EC 3.6.3.14) - none -
fig|6666666.229868.peg.1541 CDS CM001794.1 1940834 1942129 2 + 1296 V-type ATP synthase subunit B (EC 3.6.3.14) - none -
fig|6666666.229868.peg.1542 CDS CM001794.1 1942140 1942754 3 + 615 V-type ATP synthase subunit D (EC 3.6.3.14) - none -
fig|6666666.229868.peg.1543 CDS CM001794.1 1942751 1944631 2 + 1881 V-type ATP synthase subunit I (EC 3.6.3.14) - none -
fig|6666666.229868.peg.1544 CDS CM001794.1 1944642 1945076 3 + 435 V-type ATP synthase subunit K (EC 3.6.3.14) - none -
fig|6666666.229868.peg.1545 CDS CM001794.1 1945212 1945493 3 + 282 SSU ribosomal protein S6p - none -
fig|6666666.229868.peg.1546 CDS CM001794.1 1945506 1946012 3 + 507 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229868.peg.1547 CDS CM001794.1 1946023 1946322 1 + 300 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-dependent - none -
fig|6666666.229868.peg.1548 CDS CM001794.1 1946446 1947045 1 + 600 LSU ribosomal protein L9p - none -
fig|6666666.229868.peg.1549 CDS CM001794.1 1947175 1947456 1 + 282 hypothetical protein - none -
fig|6666666.229868.peg.1550 CDS CM001794.1 1948760 1947513 -2 - 1248 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229868.peg.1551 CDS CM001794.1 1949346 1948753 -3 - 594 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229868.peg.1552 CDS CM001794.1 1950726 1949371 -3 - 1356 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229868.peg.1553 CDS CM001794.1 1951226 1951774 2 + 549 transcriptional regulator, MarR family - none -
fig|6666666.229868.peg.1554 CDS CM001794.1 1953032 1951839 -2 - 1194 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229868.peg.1555 CDS CM001794.1 1954419 1953043 -3 - 1377 amino acid permease family protein - none -
fig|6666666.229868.peg.1556 CDS CM001794.1 1954467 1954586 3 + 120 hypothetical protein - none -
fig|6666666.229868.peg.1557 CDS CM001794.1 1954630 1955688 1 + 1059 Methylthioribose-1-phosphate isomerase (EC 5.3.1.23) - none -
fig|6666666.229868.peg.1558 CDS CM001794.1 1956592 1955690 -1 - 903 B. burgdorferi predicted coding region BB0418 - none -
fig|6666666.229868.peg.1559 CDS CM001794.1 1956552 1956710 3 + 159 hypothetical protein - none -
fig|6666666.229868.peg.1560 CDS CM001794.1 1957771 1956731 -1 - 1041 hypothetical protein - none -
fig|6666666.229868.peg.1561 CDS CM001794.1 1958314 1957811 -1 - 504 OmpA family protein - none -
fig|6666666.229868.peg.1562 CDS CM001794.1 1959735 1958398 -3 - 1338 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229868.peg.1563 CDS CM001794.1 1959986 1964536 2 + 4551 Cell surface protein - none -
fig|6666666.229868.peg.1564 CDS CM001794.1 1964613 1966415 3 + 1803 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229868.peg.1565 CDS CM001794.1 1966515 1967591 3 + 1077 basic membrane protein, putative - none -
fig|6666666.229868.peg.1566 CDS CM001794.1 1967606 1968016 2 + 411 Transcription termination protein NusB Transcription factors bacterial
fig|6666666.229868.peg.1567 CDS CM001794.1 1968026 1969687 2 + 1662 lipoprotein, putative - none -
fig|6666666.229868.peg.1568 CDS CM001794.1 1970238 1969708 -3 - 531 hypothetical protein - none -
fig|6666666.229868.peg.1569 CDS CM001794.1 1973009 1970472 -2 - 2538 ATP-dependent helicase HrpA, putative - none -
fig|6666666.229868.peg.1570 CDS CM001794.1 1973248 1974840 1 + 1593 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.1571 CDS CM001794.1 1974827 1976494 2 + 1668 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.1572 CDS CM001794.1 1976620 1977231 1 + 612 Substrate-specific component BioY of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.229868.peg.1573 CDS CM001794.1 1977235 1977975 1 + 741 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.229868.peg.1574 CDS CM001794.1 1978020 1978562 3 + 543 Transmembrane component BioN of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.229868.peg.1575 CDS CM001794.1 1978850 1979197 2 + 348 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.1576 CDS CM001794.1 1979172 1979303 3 + 132 hypothetical protein - none -
fig|6666666.229868.peg.1577 CDS CM001794.1 1979300 1979809 2 + 510 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229868.peg.1578 CDS CM001794.1 1979806 1980774 1 + 969 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229868.peg.1579 CDS CM001794.1 1980801 1981793 3 + 993 Serine/threonine protein kinase PrkC, regulator of stationary phase Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229868.peg.1580 CDS CM001794.1 1981865 1982581 2 + 717 T. pallidum predicted coding region TP0772 - none -
fig|6666666.229868.peg.1581 CDS CM001794.1 1983433 1982714 -1 - 720 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229868.peg.1582 CDS CM001794.1 1984914 1983433 -3 - 1482 3-dehydroquinate dehydratase I (EC 4.2.1.10) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229868.peg.1583 CDS CM001794.1 1985747 1984917 -2 - 831 3-dehydroquinate dehydratase I (EC 4.2.1.10) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229868.peg.1584 CDS CM001794.1 1986419 1985757 -2 - 663 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229868.peg.1585 CDS CM001794.1 1989253 1986419 -1 - 2835 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229868.peg.1586 CDS CM001794.1 1989257 1989379 2 + 123 hypothetical protein - none -
fig|6666666.229868.peg.1587 CDS CM001794.1 1989407 1991149 2 + 1743 antigen, putative - none -
fig|6666666.229868.peg.1588 CDS CM001794.1 1991103 1991855 3 + 753 antigen, putative - none -
fig|6666666.229868.peg.1589 CDS CM001794.1 1992049 1992354 1 + 306 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.1590 CDS CM001794.1 1992351 1992668 3 + 318 Death on curing protein, Doc toxin Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
fig|6666666.229868.peg.1591 CDS CM001794.1 1992769 1993032 1 + 264 citrate lyase acyl carrier protein - none -
fig|6666666.229868.peg.1592 CDS CM001794.1 1993022 1993891 2 + 870 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229868.peg.1593 CDS CM001794.1 1993904 1995400 2 + 1497 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229868.peg.1594 CDS CM001794.1 1995689 1997050 2 + 1362 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system
fig|6666666.229868.peg.1595 CDS CM001794.1 1997206 1997610 1 + 405 FIG01188839: hypothetical protein - none -
fig|6666666.229868.peg.1596 CDS CM001794.1 1997678 1998751 2 + 1074 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.229868.peg.1597 CDS CM001794.1 1998810 1999178 3 + 369 Glycine cleavage system H protein Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.229868.peg.1598 CDS CM001794.1 1999266 2000570 3 + 1305 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.229868.peg.1599 CDS CM001794.1 2000570 2002018 2 + 1449 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.229868.peg.1600 CDS CM001794.1 2002108 2003070 1 + 963 HrgA protein (Fragment) - none -
fig|6666666.229868.peg.1601 CDS CM001794.1 2003224 2005296 1 + 2073 Superfamily I DNA and RNA helicases - none -
fig|6666666.229868.peg.1602 CDS CM001794.1 2005298 2005984 2 + 687 hypothetical protein - none -
fig|6666666.229868.peg.1603 CDS CM001794.1 2006369 2007337 2 + 969 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Serine Biosynthesis
fig|6666666.229868.peg.1604 CDS CM001794.1 2007433 2007783 1 + 351 conserved domain protein - none -
fig|6666666.229868.peg.1605 CDS CM001794.1 2007808 2008794 1 + 987 hypothetical protein - none -
fig|6666666.229868.peg.1606 CDS CM001794.1 2009405 2008800 -2 - 606 hypothetical protein - none -
fig|6666666.229868.peg.1607 CDS CM001794.1 2010490 2009429 -1 - 1062 phosphoribosyl transferase domain protein - none -
fig|6666666.229868.peg.1608 CDS CM001794.1 2010645 2010779 3 + 135 hypothetical protein - none -
fig|6666666.229868.peg.1609 CDS CM001794.1 2011409 2010762 -2 - 648 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.229868.peg.1610 CDS CM001794.1 2013847 2011592 -1 - 2256 hypothetical protein - none -
fig|6666666.229868.peg.1611 CDS CM001794.1 2015093 2014272 -2 - 822 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229868.peg.1612 CDS CM001794.1 2015849 2015130 -2 - 720 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.229868.peg.1613 CDS CM001794.1 2016012 2016665 3 + 654 Transcriptional regulator, TetR family - none -
fig|6666666.229868.peg.1614 CDS CM001794.1 2016920 2019640 2 + 2721 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal - none -
fig|6666666.229868.peg.1615 CDS CM001794.1 2020140 2021471 3 + 1332 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229868.peg.1616 CDS CM001794.1 2021562 2022086 3 + 525 MutT/nudix family protein - none -
fig|6666666.229868.peg.1617 CDS CM001794.1 2022251 2022904 2 + 654 Transcriptional regulator, TetR family - none -
fig|6666666.229868.peg.1618 CDS CM001794.1 2023145 2023723 2 + 579 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.1619 CDS CM001794.1 2023756 2024409 1 + 654 Transmembrane component BL0694 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.1620 CDS CM001794.1 2024400 2025845 3 + 1446 Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.1621 CDS CM001794.1 2025902 2026993 2 + 1092 Cobalt-precorrin-6 synthase, anaerobic Cobalamin synthesis
fig|6666666.229868.peg.1622 CDS CM001794.1 2027119 2028948 1 + 1830 Formate dehydrogenase-O, major subunit (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229868.peg.1623 CDS CM001794.1 2028942 2030732 3 + 1791 Periplasmic [Fe] hydrogenase large subunit (EC 1.12.7.2) - none -
fig|6666666.229868.peg.1624 CDS CM001794.1 2032400 2030748 -2 - 1653 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.1625 CDS CM001794.1 2033309 2032455 -2 - 855 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229868.peg.1626 CDS CM001794.1 2034375 2033350 -3 - 1026 aminotransferase - none -
fig|6666666.229868.peg.1627 CDS CM001794.1 2034887 2034381 -2 - 507 Positive regulator of CheA protein activity (CheW) - none -
fig|6666666.229868.peg.1628 CDS CM001794.1 2035224 2036981 3 + 1758 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.1629 CDS CM001794.1 2038129 2037038 -1 - 1092 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229868.peg.1630 CDS CM001794.1 2039909 2038137 -2 - 1773 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229868.peg.1631 CDS CM001794.1 2040091 2039939 -1 - 153 hypothetical protein - none -
fig|6666666.229868.peg.1632 CDS CM001794.1 2040070 2040552 1 + 483 unknown - none -
fig|6666666.229868.peg.1633 CDS CM001794.1 2040590 2041057 2 + 468 unknown - none -
fig|6666666.229868.peg.1634 CDS CM001794.1 2041908 2041165 -3 - 744 Protein of unknown function DUF541 - none -
fig|6666666.229868.peg.1635 CDS CM001794.1 2042223 2043698 3 + 1476 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism
fig|6666666.229868.peg.1636 CDS CM001794.1 2043736 2044254 1 + 519 hypothetical protein - none -
fig|6666666.229868.peg.1637 CDS CM001794.1 2044256 2046505 2 + 2250 hypothetical protein - none -
fig|6666666.229868.peg.1638 CDS CM001794.1 2046505 2047920 1 + 1416 Fibronectin/fibrinogen-binding protein - none -
fig|6666666.229868.peg.1639 CDS CM001794.1 2048574 2047915 -3 - 660 phosphoesterase, putative - none -
fig|6666666.229868.peg.1640 CDS CM001794.1 2049429 2048578 -3 - 852 lipoprotein, putative - none -
fig|6666666.229868.peg.1641 CDS CM001794.1 2049659 2049543 -2 - 117 hypothetical protein - none -
fig|6666666.229868.peg.1642 CDS CM001794.1 2051156 2049801 -2 - 1356 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229868.peg.1643 CDS CM001794.1 2052010 2051159 -1 - 852 Lipoate synthase Lipoic acid metabolism
fig|6666666.229868.peg.1644 CDS CM001794.1 2052310 2052077 -1 - 234 hypothetical protein - none -
fig|6666666.229868.peg.1645 CDS CM001794.1 2052767 2052303 -2 - 465 hypothetical protein - none -
fig|6666666.229868.peg.1646 CDS CM001794.1 2053600 2053001 -1 - 600 hypothetical protein - none -
fig|6666666.229868.peg.1647 CDS CM001794.1 2054243 2053608 -2 - 636 YD repeat protein - none -
fig|6666666.229868.peg.1648 CDS CM001794.1 2054837 2054262 -2 - 576 hypothetical protein - none -
fig|6666666.229868.peg.1649 CDS CM001794.1 2055350 2055228 -2 - 123 hypothetical protein - none -
fig|6666666.229868.peg.1650 CDS CM001794.1 2056843 2055323 -1 - 1521 YD repeat protein - none -
fig|6666666.229868.peg.1651 CDS CM001794.1 2057330 2057022 -2 - 309 hypothetical protein - none -
fig|6666666.229868.peg.1652 CDS CM001794.1 2060651 2058210 -2 - 2442 YD repeat protein - none -
fig|6666666.229868.peg.1653 CDS CM001794.1 2062474 2061182 -1 - 1293 YD repeat protein - none -
fig|6666666.229868.peg.1654 CDS CM001794.1 2064009 2062999 -3 - 1011 hypothetical protein - none -
fig|6666666.229868.peg.1655 CDS CM001794.1 2065513 2064011 -1 - 1503 YD repeat protein - none -
fig|6666666.229868.peg.1656 CDS CM001794.1 2065632 2065510 -3 - 123 hypothetical protein - none -
fig|6666666.229868.peg.1657 CDS CM001794.1 2066664 2065702 -3 - 963 lipoprotein, putative - none -
fig|6666666.229868.peg.1658 CDS CM001794.1 2070144 2066686 -3 - 3459 YD repeat protein - none -
fig|6666666.229868.peg.1659 CDS CM001794.1 2070776 2070177 -2 - 600 hypothetical protein - none -
fig|6666666.229868.peg.1660 CDS CM001794.1 2079984 2070784 -3 - 9201 YD repeat protein - none -
fig|6666666.229868.peg.1661 CDS CM001794.1 2080496 2080014 -2 - 483 YD repeat protein - none -
fig|6666666.229868.peg.1662 CDS CM001794.1 2081267 2080563 -2 - 705 hypothetical protein - none -
fig|6666666.229868.peg.1663 CDS CM001794.1 2082466 2081264 -1 - 1203 Type IV pilus biogenesis protein PilQ - none -
fig|6666666.229868.peg.1664 CDS CM001794.1 2083235 2082477 -2 - 759 hypothetical protein - none -
fig|6666666.229868.peg.1665 CDS CM001794.1 2084248 2083232 -1 - 1017 hypothetical protein - none -
fig|6666666.229868.peg.1666 CDS CM001794.1 2084897 2084235 -2 - 663 hypothetical protein - none -
fig|6666666.229868.peg.1667 CDS CM001794.1 2085494 2084913 -2 - 582 hypothetical protein - none -
fig|6666666.229868.peg.1668 CDS CM001794.1 2085814 2086767 1 + 954 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229868.peg.1669 CDS CM001794.1 2088506 2086824 -2 - 1683 Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90) Glycolysis and Gluconeogenesis
fig|6666666.229868.peg.1670 CDS CM001794.1 2089113 2088526 -3 - 588 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229868.peg.1671 CDS CM001794.1 2089436 2089131 -2 - 306 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229868.peg.1672 CDS CM001794.1 2090114 2089533 -2 - 582 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H;
Ribonucleases in Bacillus
fig|6666666.229868.peg.1673 CDS CM001794.1 2092265 2090130 -2 - 2136 hypothetical protein - none -
fig|6666666.229868.peg.1674 CDS CM001794.1 2092924 2092322 -1 - 603 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229868.peg.1675 CDS CM001794.1 2094100 2092988 -1 - 1113 mannosyltransferase, putative - none -
fig|6666666.229868.peg.1676 CDS CM001794.1 2095186 2094164 -1 - 1023 FIG004453: protein YceG like Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229868.peg.1677 CDS CM001794.1 2095397 2095206 -2 - 192 hypothetical protein - none -
fig|6666666.229868.peg.1678 CDS CM001794.1 2096356 2095394 -1 - 963 Metal-dependent hydrolases of the beta-lactamase superfamily I Beta-lactamase
fig|6666666.229868.peg.1679 CDS CM001794.1 2096832 2096386 -3 - 447 hypothetical protein - none -
fig|6666666.229868.peg.1680 CDS CM001794.1 2097788 2097180 -2 - 609 hypothetical protein - none -
fig|6666666.229868.peg.1681 CDS CM001794.1 2099734 2097791 -1 - 1944 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229868.peg.1682 CDS CM001794.1 2099846 2100880 2 + 1035 Dimethylallyltransferase (EC 2.5.1.1) @ (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) @ Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229868.peg.1683 CDS CM001794.1 2100884 2101408 2 + 525 TPR domain protein, putative component of TonB system Ton and Tol transport systems
fig|6666666.229868.peg.1684 CDS CM001794.1 2101412 2102215 2 + 804 Phosphoesterase family protein - none -
fig|6666666.229868.peg.1685 CDS CM001794.1 2102197 2102682 1 + 486 hypothetical protein - none -
fig|6666666.229868.peg.1686 CDS CM001794.1 2104148 2102685 -2 - 1464 B. burgdorferi predicted coding region BB0509 - none -
fig|6666666.229868.peg.1687 CDS CM001794.1 2105539 2104244 -1 - 1296 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) Citrate Metabolism, Transport, and Regulation
fig|6666666.229868.peg.1688 CDS CM001794.1 2106585 2105557 -3 - 1029 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229868.peg.1689 CDS CM001794.1 2107155 2106592 -3 - 564 Fumarate hydratase class I, aerobic (EC 4.2.1.2); L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32) Muconate lactonizing enzyme family
fig|6666666.229868.peg.1690 CDS CM001794.1 2108015 2107170 -2 - 846 Fumarate hydratase class I, aerobic (EC 4.2.1.2); L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32) Muconate lactonizing enzyme family
fig|6666666.229868.peg.1691 CDS CM001794.1 2108765 2108094 -2 - 672 hypothetical protein - none -
fig|6666666.229868.peg.1692 CDS CM001794.1 2110078 2108867 -1 - 1212 ABC transporter permease protein - none -
fig|6666666.229868.peg.1693 CDS CM001794.1 2110534 2110097 -1 - 438 15 kDa lipoprotein precursor - none -
fig|6666666.229868.peg.1694 CDS CM001794.1 2111223 2110531 -3 - 693 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229868.peg.1695 CDS CM001794.1 2112388 2111252 -1 - 1137 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229868.peg.1696 CDS CM001794.1 2113699 2112422 -1 - 1278 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229868.peg.1697 CDS CM001794.1 2115148 2113880 -1 - 1269 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229868.peg.1698 CDS CM001794.1 2115863 2115237 -2 - 627 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229868.peg.1699 CDS CM001794.1 2117171 2115903 -2 - 1269 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229868.peg.1700 CDS CM001794.1 2117962 2117297 -1 - 666 ABC transporter related protein - none -
fig|6666666.229868.peg.1701 CDS CM001794.1 2118375 2117980 -3 - 396 membrane protein, putative - none -
fig|6666666.229868.peg.1702 CDS CM001794.1 2118677 2119339 2 + 663 L-serine dehydratase, beta subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229868.peg.1703 CDS CM001794.1 2119359 2120249 3 + 891 L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229868.peg.1704 CDS CM001794.1 2120738 2120295 -2 - 444 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229868.peg.1705 CDS CM001794.1 2121002 2120799 -2 - 204 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent - none -
fig|6666666.229868.peg.1706 CDS CM001794.1 2122685 2121039 -2 - 1647 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229868.peg.1707 CDS CM001794.1 2123468 2123055 -2 - 414 Chorismate mutase II (EC 5.4.99.5) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229868.peg.1708 CDS CM001794.1 2126310 2123509 -3 - 2802 Pyruvate,phosphate dikinase (EC 2.7.9.1) Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229868.peg.1709 CDS CM001794.1 2126406 2127593 3 + 1188 Capsule biosynthesis protein capA - none -
fig|6666666.229868.peg.1710 CDS CM001794.1 2129040 2127598 -3 - 1443 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.229868.peg.1711 CDS CM001794.1 2130691 2129132 -1 - 1560 hypothetical protein - none -
fig|6666666.229868.peg.1712 CDS CM001794.1 2131104 2130688 -3 - 417 FIG01187020: hypothetical protein - none -
fig|6666666.229868.peg.1713 CDS CM001794.1 2134027 2131085 -1 - 2943 Chromosome partition protein smc DNA structural proteins, bacterial
fig|6666666.229868.peg.1714 CDS CM001794.1 2134146 2134766 3 + 621 hypothetical protein - none -
fig|6666666.229868.peg.1715 CDS CM001794.1 2135236 2134796 -1 - 441 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY Flagellar motility
fig|6666666.229868.peg.1716 CDS CM001794.1 2135722 2135258 -1 - 465 Chemotaxis protein CheX - none -
fig|6666666.229868.peg.1717 CDS CM001794.1 2137081 2135747 -1 - 1335 Positive regulator of CheA protein activity (CheW) - none -
fig|6666666.229868.peg.1718 CDS CM001794.1 2139503 2137098 -2 - 2406 Signal transduction histidine kinase CheA (EC 2.7.3.-) Flagellar motility
fig|6666666.229868.peg.1719 CDS CM001794.1 2139633 2140790 3 + 1158 hypothetical protein - none -
fig|6666666.229868.peg.1720 CDS CM001794.1 2140790 2141632 2 + 843 hypothetical protein - none -
fig|6666666.229868.peg.1721 CDS CM001794.1 2141709 2142758 3 + 1050 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Redox-dependent regulation of nucleus processes
fig|6666666.229868.peg.1722 CDS CM001794.1 2143607 2142864 -2 - 744 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229868.peg.1723 CDS CM001794.1 2143929 2143699 -3 - 231 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases cAMP signaling in bacteria
fig|6666666.229868.peg.1724 CDS CM001794.1 2144615 2144010 -2 - 606 hypothetical protein - none -
fig|6666666.229868.peg.1725 CDS CM001794.1 2145157 2144648 -1 - 510 hypothetical protein - none -
fig|6666666.229868.peg.1726 CDS CM001794.1 2145549 2145325 -3 - 225 hypothetical protein - none -
fig|6666666.229868.peg.1727 CDS CM001794.1 2147416 2145659 -1 - 1758 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229868.peg.1728 CDS CM001794.1 2148655 2147519 -1 - 1137 hypothetical protein - none -
fig|6666666.229868.peg.1729 CDS CM001794.1 2148781 2149200 1 + 420 hypothetical protein - none -
fig|6666666.229868.peg.1730 CDS CM001794.1 2149270 2150271 1 + 1002 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.229868.peg.1731 CDS CM001794.1 2150507 2150887 2 + 381 hypothetical protein - none -
fig|6666666.229868.peg.1732 CDS CM001794.1 2151029 2151889 2 + 861 Flagellin protein FlaA Flagellum;
Flagellum in Campylobacter
fig|6666666.229868.peg.1733 CDS CM001794.1 2152171 2153028 1 + 858 Flagellin protein FlaA Flagellum;
Flagellum in Campylobacter
fig|6666666.229868.peg.1734 CDS CM001794.1 2153231 2153602 2 + 372 Flagellin protein FlaG Flagellum
fig|6666666.229868.peg.1735 CDS CM001794.1 2153647 2155605 1 + 1959 Flagellar hook-associated protein FliD Flagellum
fig|6666666.229868.peg.1736 CDS CM001794.1 2155615 2156217 1 + 603 FIG01187421: hypothetical protein - none -
fig|6666666.229868.peg.1737 CDS CM001794.1 2156336 2156596 2 + 261 FIG01187678: hypothetical protein - none -
fig|6666666.229868.peg.1738 CDS CM001794.1 2156598 2157029 3 + 432 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA YjeE
fig|6666666.229868.peg.1739 CDS CM001794.1 2157026 2157682 2 + 657 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.229868.peg.1740 CDS CM001794.1 2157711 2158871 3 + 1161 Response regulator - none -
fig|6666666.229868.peg.1741 CDS CM001794.1 2160047 2158875 -2 - 1173 Hypothetical radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type Heat shock dnaK gene cluster extended
fig|6666666.229868.peg.1742 CDS CM001794.1 2160748 2160047 -1 - 702 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.229868.peg.1743 CDS CM001794.1 2160822 2161286 3 + 465 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229868.peg.1744 CDS CM001794.1 2161290 2162156 3 + 867 FIG01188460: hypothetical protein - none -
fig|6666666.229868.peg.1745 CDS CM001794.1 2162707 2162153 -1 - 555 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229868.peg.1746 CDS CM001794.1 2163131 2162682 -2 - 450 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229868.peg.1747 CDS CM001794.1 2163271 2165655 1 + 2385 FIG01187737: hypothetical protein - none -
fig|6666666.229868.peg.1748 CDS CM001794.1 2165655 2166590 3 + 936 FIG01187441: hypothetical protein - none -
fig|6666666.229868.peg.1749 CDS CM001794.1 2166574 2168103 1 + 1530 FIG01187076: hypothetical protein - none -
fig|6666666.229868.peg.1750 CDS CM001794.1 2168100 2169623 3 + 1524 FIG01188653: hypothetical protein - none -
fig|6666666.229868.peg.1751 CDS CM001794.1 2169623 2171053 2 + 1431 Uncharacterized protein TP_0172 - none -
fig|6666666.229868.peg.1752 CDS CM001794.1 2171247 2171942 3 + 696 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229868.peg.1753 CDS CM001794.1 2171939 2174536 2 + 2598 ABC transporter permease protein - none -
fig|6666666.229868.peg.1754 CDS CM001794.1 2175673 2174540 -1 - 1134 Sensor protein resE (EC 2.7.3.-) - none -
fig|6666666.229868.peg.1755 CDS CM001794.1 2176289 2175675 -2 - 615 Two-component response regulator - none -
fig|6666666.229868.peg.1756 CDS CM001794.1 2176670 2176434 -2 - 237 hypothetical protein - none -
fig|6666666.229868.peg.1757 CDS CM001794.1 2176946 2176674 -2 - 273 hypothetical protein - none -
fig|6666666.229868.peg.1758 CDS CM001794.1 2178379 2177015 -1 - 1365 Melibiose carrier protein, Na+/melibiose symporter - none -
fig|6666666.229868.peg.1759 CDS CM001794.1 2180705 2178381 -2 - 2325 Alpha-galactosidase (EC 3.2.1.22) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization
fig|6666666.229868.peg.1760 CDS CM001794.1 2180914 2180777 -1 - 138 hypothetical protein - none -
fig|6666666.229868.peg.1761 CDS CM001794.1 2180899 2182017 1 + 1119 hypothetical protein - none -
fig|6666666.229868.peg.1762 CDS CM001794.1 2184507 2182051 -3 - 2457 Recombination inhibitory protein MutS2 DNA repair, bacterial MutL-MutS system
fig|6666666.229868.peg.1763 CDS CM001794.1 2185475 2184528 -2 - 948 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229868.peg.1764 CDS CM001794.1 2186292 2185477 -3 - 816 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229868.peg.1765 CDS CM001794.1 2187215 2186319 -2 - 897 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229868.peg.1766 CDS CM001794.1 2187893 2187228 -2 - 666 membrane protein, putative - none -
fig|6666666.229868.peg.1767 CDS CM001794.1 2187950 2188798 2 + 849 membrane protein, putative - none -
fig|6666666.229868.peg.1768 CDS CM001794.1 2188872 2190284 3 + 1413 Metallo-beta-lactamase family protein, RNA-specific Bacterial RNA-metabolizing Zn-dependent hydrolases;
Ribonucleases in Bacillus
fig|6666666.229868.peg.1769 CDS CM001794.1 2190291 2191067 3 + 777 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229868.peg.1770 CDS CM001794.1 2192446 2191064 -1 - 1383 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.229868.peg.1771 CDS CM001794.1 2193573 2192485 -3 - 1089 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229868.peg.1772 CDS CM001794.1 2194467 2193592 -3 - 876 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229868.peg.1773 CDS CM001794.1 2195504 2194515 -2 - 990 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
N-linked Glycosylation in Bacteria;
Rhamnose containing glycans
fig|6666666.229868.peg.1774 CDS CM001794.1 2196580 2195510 -1 - 1071 glycosyl transferase, group 1 family protein - none -
fig|6666666.229868.peg.1775 CDS CM001794.1 2197592 2196618 -2 - 975 Glycosyl transferase, family 2 - none -
fig|6666666.229868.peg.1776 CDS CM001794.1 2200379 2197653 -2 - 2727 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
Mycobacterium virulence operon involved in an unknown function with a Jag Protein and YidC and YidD;
RNA modification cluster
fig|6666666.229868.peg.1777 CDS CM001794.1 2201515 2200376 -1 - 1140 putative bifunctional polymerase - none -
fig|6666666.229868.peg.1778 CDS CM001794.1 2202387 2201617 -3 - 771 glycosyltransferase - none -
fig|6666666.229868.peg.1779 CDS CM001794.1 2203960 2202641 -1 - 1320 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.229868.peg.1780 CDS CM001794.1 2205381 2203948 -3 - 1434 glycosyl transferase, group 1 family protein - none -
fig|6666666.229868.peg.1781 CDS CM001794.1 2206408 2205407 -1 - 1002 putative glycosyltransferase - none -
fig|6666666.229868.peg.1782 CDS CM001794.1 2207536 2206535 -1 - 1002 Beta-1,3-glucosyltransferase - none -
fig|6666666.229868.peg.1783 CDS CM001794.1 2208528 2207539 -3 - 990 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.229868.peg.1784 CDS CM001794.1 2209869 2208532 -3 - 1338 Conserved domain protein - none -
fig|6666666.229868.peg.1785 CDS CM001794.1 2211273 2209873 -3 - 1401 glycosyl transferase, group 1 family protein - none -
fig|6666666.229868.peg.1786 CDS CM001794.1 2212331 2211303 -2 - 1029 Glycosyltransferase - none -
fig|6666666.229868.peg.1787 CDS CM001794.1 2213501 2212359 -2 - 1143 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis
fig|6666666.229868.peg.1788 CDS CM001794.1 2214367 2213498 -1 - 870 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229868.peg.1789 CDS CM001794.1 2215395 2214364 -3 - 1032 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) N-linked Glycosylation in Bacteria
fig|6666666.229868.peg.1790 CDS CM001794.1 2216396 2215395 -2 - 1002 hypothetical protein - none -
fig|6666666.229868.peg.1791 CDS CM001794.1 2217232 2216384 -1 - 849 hypothetical protein - none -
fig|6666666.229868.peg.1792 CDS CM001794.1 2218499 2217219 -2 - 1281 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) Rhamnose containing glycans;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229868.peg.1793 CDS CM001794.1 2219359 2218508 -1 - 852 Teichoic acid translocation permease protein TagG Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229868.peg.1794 CDS CM001794.1 2221214 2219364 -2 - 1851 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37) Phosphoenolpyruvate phosphomutase
fig|6666666.229868.peg.1795 CDS CM001794.1 2222343 2221207 -3 - 1137 Phosphonopyruvate decarboxylase (EC 4.1.1.82) Phosphoenolpyruvate phosphomutase
fig|6666666.229868.peg.1796 CDS CM001794.1 2223645 2222344 -3 - 1302 Phosphoenolpyruvate phosphomutase (EC 5.4.2.9) Phosphoenolpyruvate phosphomutase
fig|6666666.229868.peg.1797 CDS CM001794.1 2223881 2223720 -2 - 162 hypothetical protein - none -
fig|6666666.229868.peg.1798 CDS CM001794.1 2225693 2223969 -2 - 1725 Na(+)/H(+) antiporter, homolog - none -
fig|6666666.229868.peg.1799 CDS CM001794.1 2225803 2226042 1 + 240 hypothetical protein - none -
fig|6666666.229868.peg.1800 CDS CM001794.1 2226066 2226731 3 + 666 Uncharacterized protein TP_0665 - none -
fig|6666666.229868.peg.1801 CDS CM001794.1 2227594 2226854 -1 - 741 flagellar filament outer layer protein FlaA, putative - none -
fig|6666666.229868.peg.1802 CDS CM001794.1 2228326 2227616 -1 - 711 flagellar filament outer layer protein FlaA, putative - none -
fig|6666666.229868.peg.1803 CDS CM001794.1 2228534 2229772 2 + 1239 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.229868.peg.1804 CDS CM001794.1 2229827 2230528 2 + 702 hypothetical protein - none -
fig|6666666.229868.peg.1805 CDS CM001794.1 2230531 2231343 1 + 813 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.229868.peg.1806 CDS CM001794.1 2231378 2232697 2 + 1320 lipoprotein, putative - none -
fig|6666666.229868.peg.1807 CDS CM001794.1 2232702 2234696 3 + 1995 COG0488: ATPase components of ABC transporters with duplicated ATPase domains - none -
fig|6666666.229868.peg.1808 CDS CM001794.1 2235339 2234710 -3 - 630 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229868.peg.1809 CDS CM001794.1 2237302 2235350 -1 - 1953 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229868.peg.1810 CDS CM001794.1 2238310 2237303 -1 - 1008 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229868.peg.1811 CDS CM001794.1 2240512 2238326 -1 - 2187 hypothetical protein - none -
fig|6666666.229868.peg.1812 CDS CM001794.1 2241666 2240524 -3 - 1143 ATP-binding protein (ylxH-2) - none -
fig|6666666.229868.peg.1813 CDS CM001794.1 2242055 2241657 -2 - 399 hypothetical protein - none -
fig|6666666.229868.peg.1814 CDS CM001794.1 2243989 2242106 -1 - 1884 glycosyl hydrolase, family 57 - none -
fig|6666666.229868.peg.1815 CDS CM001794.1 2244620 2244081 -2 - 540 FIG01188430: hypothetical protein - none -
fig|6666666.229868.peg.1816 CDS CM001794.1 2245210 2244617 -1 - 594 Uncharacterized protein TP_0149 - none -
fig|6666666.229868.peg.1817 CDS CM001794.1 2245702 2245211 -1 - 492 FIG01187457: hypothetical protein - none -
fig|6666666.229868.peg.1818 CDS CM001794.1 2246729 2245695 -2 - 1035 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229868.peg.1819 CDS CM001794.1 2248012 2246726 -1 - 1287 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229868.peg.1820 CDS CM001794.1 2249466 2248009 -3 - 1458 FIG01187540: hypothetical protein - none -
fig|6666666.229868.peg.1821 CDS CM001794.1 2249960 2249472 -2 - 489 FIG01188208: hypothetical protein - none -
fig|6666666.229868.peg.1822 CDS CM001794.1 2250022 2250924 1 + 903 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229868.peg.1823 CDS CM001794.1 2252878 2251043 -1 - 1836 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.1824 CDS CM001794.1 2255048 2253123 -2 - 1926 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229868.peg.1825 CDS CM001794.1 2255215 2255048 -1 - 168 hypothetical protein - none -
fig|6666666.229868.peg.1826 CDS CM001794.1 2255440 2255300 -1 - 141 hypothetical protein - none -
fig|6666666.229868.peg.1827 CDS CM001794.1 2255837 2255484 -2 - 354 Cadmium efflux system accessory protein Cadmium resistance
fig|6666666.229868.peg.1828 CDS CM001794.1 2255982 2256599 3 + 618 V-type ATP synthase subunit E - none -
fig|6666666.229868.peg.1829 CDS CM001794.1 2256603 2257154 3 + 552 hypothetical protein - none -
fig|6666666.229868.peg.1830 CDS CM001794.1 2257229 2257873 2 + 645 membrane protein, putative - none -
fig|6666666.229868.peg.1831 CDS CM001794.1 2258055 2258804 3 + 750 hypothetical protein - none -
fig|6666666.229868.peg.1832 CDS CM001794.1 2259251 2258838 -2 - 414 hypothetical protein - none -
fig|6666666.229868.peg.1833 CDS CM001794.1 2259756 2259274 -3 - 483 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229868.peg.1834 CDS CM001794.1 2260007 2260669 2 + 663 HD domain protein - none -
fig|6666666.229868.peg.1835 CDS CM001794.1 2260750 2262603 1 + 1854 hypothetical protein - none -
fig|6666666.229868.peg.1836 CDS CM001794.1 2262638 2264509 2 + 1872 RNase R-related protein - none -
fig|6666666.229868.peg.1837 CDS CM001794.1 2264523 2266004 3 + 1482 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.229868.peg.1838 CDS CM001794.1 2266035 2268023 3 + 1989 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229868.peg.1839 CDS CM001794.1 2268032 2268400 2 + 369 FIG00514173: hypothetical protein - none -
fig|6666666.229868.peg.1840 CDS CM001794.1 2268800 2268417 -2 - 384 Possible glyoxylase family protein (Lactoylglutathione lyase) (EC 4.4.1.5) - none -
fig|6666666.229868.peg.1841 CDS CM001794.1 2269419 2268838 -3 - 582 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229868.peg.1842 CDS CM001794.1 2270022 2269444 -3 - 579 Transcriptional regulator, TetR family - none -
fig|6666666.229868.peg.1843 CDS CM001794.1 2273014 2270285 -1 - 2730 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.229868.peg.1844 CDS CM001794.1 2273203 2273739 1 + 537 nitroreductase family protein - none -
fig|6666666.229868.peg.1845 CDS CM001794.1 2277135 2273752 -3 - 3384 probable extracellular nuclease - none -
fig|6666666.229868.peg.1846 CDS CM001794.1 2278526 2277222 -2 - 1305 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.229868.peg.1847 CDS CM001794.1 2278712 2280076 2 + 1365 hypothetical protein - none -
fig|6666666.229868.peg.1848 CDS CM001794.1 2281128 2280073 -3 - 1056 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229868.peg.1849 CDS CM001794.1 2281204 2282199 1 + 996 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.229868.peg.1850 CDS CM001794.1 2282962 2282393 -1 - 570 hypothetical protein - none -
fig|6666666.229868.peg.1851 CDS CM001794.1 2283125 2282949 -2 - 177 hypothetical protein - none -
fig|6666666.229868.peg.1852 CDS CM001794.1 2284492 2283191 -1 - 1302 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Bacterial cell division cluster;
Peptidoglycan Biosynthesis
fig|6666666.229868.peg.1853 CDS CM001794.1 2286342 2284489 -3 - 1854 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
Bacterial cell division cluster;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229868.peg.1854 CDS CM001794.1 2286847 2286329 -1 - 519 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.229868.peg.1855 CDS CM001794.1 2287715 2286852 -2 - 864 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.229868.peg.1856 CDS CM001794.1 2288756 2287722 -2 - 1035 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster
fig|6666666.229868.peg.1857 CDS CM001794.1 2289709 2288774 -1 - 936 B. burgdorferi predicted coding region BB0714 - none -
fig|6666666.229868.peg.1858 CDS CM001794.1 2290917 2290090 -3 - 828 FIG137478: Hypothetical protein tRNA modification Bacteria
fig|6666666.229868.peg.1859 CDS CM001794.1 2292823 2290964 -1 - 1860 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Flagellum;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229868.peg.1860 CDS CM001794.1 2294603 2292816 -2 - 1788 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229868.peg.1861 CDS CM001794.1 2295650 2294772 -2 - 879 hypothetical protein - none -
fig|6666666.229868.peg.1862 CDS CM001794.1 2295894 2297141 3 + 1248 Peptidase, S41 family - none -
fig|6666666.229868.peg.1863 CDS CM001794.1 2298740 2297157 -2 - 1584 FIG01187002: hypothetical protein - none -
fig|6666666.229868.peg.1864 CDS CM001794.1 2300871 2298832 -3 - 2040 FIG01189046: hypothetical protein - none -
fig|6666666.229868.peg.1865 CDS CM001794.1 2302231 2300882 -1 - 1350 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229868.peg.1866 CDS CM001794.1 2302995 2302360 -3 - 636 LSU ribosomal protein L25p - none -
fig|6666666.229868.peg.1867 CDS CM001794.1 2303505 2303224 -3 - 282 Protein of unknown function identified by role in sporulation (SpoVG) Sporulation-associated proteins with broader functions
fig|6666666.229868.peg.1868 CDS CM001794.1 2304423 2303569 -3 - 855 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229868.peg.1869 CDS CM001794.1 2305918 2304521 -1 - 1398 probable periplasmic protein Cj0610c {imported} - Campylobacter jejuni (strain NCTC 11168) - none -
fig|6666666.229868.peg.1870 CDS CM001794.1 2307405 2305933 -3 - 1473 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) - none -
fig|6666666.229868.peg.1871 CDS CM001794.1 2308053 2307427 -3 - 627 Flagellar protein FlbB Flagellum
fig|6666666.229868.peg.1872 CDS CM001794.1 2309323 2308265 -1 - 1059 HflC protein Hfl operon
fig|6666666.229868.peg.1873 CDS CM001794.1 2310324 2309329 -3 - 996 HflK protein Hfl operon
fig|6666666.229868.peg.1874 CDS CM001794.1 2312460 2310334 -3 - 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229868.peg.1875 CDS CM001794.1 2312947 2312492 -1 - 456 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229868.peg.1876 CDS CM001794.1 2314823 2313060 -2 - 1764 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229868.peg.1877 CDS CM001794.1 2314974 2315414 3 + 441 hypothetical protein - none -
fig|6666666.229868.peg.1878 CDS CM001794.1 2315427 2316587 3 + 1161 hypothetical protein - none -
fig|6666666.229868.peg.1879 CDS CM001794.1 2316604 2316834 1 + 231 hypothetical protein - none -
fig|6666666.229868.peg.1880 CDS CM001794.1 2316831 2317526 3 + 696 hypothetical protein - none -
fig|6666666.229868.peg.1881 CDS CM001794.1 2317704 2318420 3 + 717 hypothetical protein - none -
fig|6666666.229868.peg.1882 CDS CM001794.1 2319058 2318459 -1 - 600 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229868.peg.1883 CDS CM001794.1 2320629 2319055 -3 - 1575 ComEC/Rec2-related protein - none -
fig|6666666.229868.peg.1884 CDS CM001794.1 2321795 2320623 -2 - 1173 hypothetical protein - none -
fig|6666666.229868.peg.1885 CDS CM001794.1 2322946 2321792 -1 - 1155 hypothetical protein - none -
fig|6666666.229868.peg.1886 CDS CM001794.1 2323054 2323473 1 + 420 membrane protein, putative - none -
fig|6666666.229868.peg.1887 CDS CM001794.1 2325380 2323449 -2 - 1932 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.229868.peg.1888 CDS CM001794.1 2327223 2325361 -3 - 1863 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Flagellum in Campylobacter;
Peptidoglycan Biosynthesis
fig|6666666.229868.peg.1889 CDS CM001794.1 2327747 2327211 -2 - 537 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.229868.peg.1890 CDS CM001794.1 2329309 2327762 -1 - 1548 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
ECF class transporters
fig|6666666.229868.peg.1891 CDS CM001794.1 2331026 2329422 -2 - 1605 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229868.peg.1892 CDS CM001794.1 2332431 2331133 -3 - 1299 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229868.peg.1893 CDS CM001794.1 2333858 2332431 -2 - 1428 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229868.peg.1894 CDS CM001794.1 2334131 2334550 2 + 420 hypothetical protein - none -
fig|6666666.229868.peg.1895 CDS CM001794.1 2334562 2335398 1 + 837 hypothetical protein - none -
fig|6666666.229868.peg.1896 CDS CM001794.1 2337433 2335406 -1 - 2028 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229868.peg.1897 CDS CM001794.1 2338900 2337455 -1 - 1446 hypothetical protein - none -
fig|6666666.229868.peg.1898 CDS CM001794.1 2339072 2339494 2 + 423 hypothetical protein - none -
fig|6666666.229868.peg.1899 CDS CM001794.1 2339940 2339578 -3 - 363 DNA-binding protein - none -
fig|6666666.229868.peg.1900 CDS CM001794.1 2340157 2339909 -1 - 249 hypothetical protein - none -
fig|6666666.229868.peg.1901 CDS CM001794.1 2340303 2340734 3 + 432 hemerythrin family protein - none -
fig|6666666.229868.peg.1902 CDS CM001794.1 2340831 2342516 3 + 1686 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229868.peg.1903 CDS CM001794.1 2342528 2343337 2 + 810 FIG01188704: hypothetical protein - none -
fig|6666666.229868.peg.1904 CDS CM001794.1 2343334 2344530 1 + 1197 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229868.peg.1905 CDS CM001794.1 2344517 2345161 2 + 645 cyclic nucleotide binding domain protein - none -
fig|6666666.229868.peg.1906 CDS CM001794.1 2345161 2346066 1 + 906 transglycosylase, SLT family - none -
fig|6666666.229868.peg.1907 CDS CM001794.1 2346189 2346479 3 + 291 ribosomal subunit interface protein, putative - none -
fig|6666666.229868.peg.1908 CDS CM001794.1 2346557 2347612 2 + 1056 HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-) HPr catabolite repression system
fig|6666666.229868.peg.1909 CDS CM001794.1 2347625 2347891 2 + 267 Catabolite repression HPr-like protein Crh HPr catabolite repression system
fig|6666666.229868.peg.1910 CDS CM001794.1 2347943 2349325 2 + 1383 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229868.peg.1911 CDS CM001794.1 2349325 2350632 1 + 1308 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229868.peg.1912 CDS CM001794.1 2350728 2351303 3 + 576 HD domain protein - none -
fig|6666666.229868.peg.1913 CDS CM001794.1 2352957 2351326 -3 - 1632 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.1914 CDS CM001794.1 2353494 2352976 -3 - 519 hypothetical protein - none -
fig|6666666.229868.peg.1915 CDS CM001794.1 2355019 2353520 -1 - 1500 Radical SAM domain heme biosynthesis protein - none -
fig|6666666.229868.peg.1916 CDS CM001794.1 2355300 2355034 -3 - 267 hypothetical protein - none -
fig|6666666.229868.peg.1917 CDS CM001794.1 2355839 2355318 -2 - 522 hypothetical protein - none -
fig|6666666.229868.peg.1918 CDS CM001794.1 2356211 2355927 -2 - 285 hypothetical protein - none -
fig|6666666.229868.peg.1919 CDS CM001794.1 2356970 2356740 -2 - 231 hypothetical protein - none -
fig|6666666.229868.peg.1920 CDS CM001794.1 2358036 2357176 -3 - 861 membrane protein, putative - none -
fig|6666666.229868.peg.1921 CDS CM001794.1 2361627 2358160 -3 - 3468 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229868.peg.1922 CDS CM001794.1 2362329 2361628 -3 - 702 TPR domain protein - none -
fig|6666666.229868.peg.1923 CDS CM001794.1 2363462 2362395 -2 - 1068 Flagellar motor switch protein FliG Flagellum
fig|6666666.229868.peg.1924 CDS CM001794.1 2365666 2363543 -1 - 2124 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.1925 CDS CM001794.1 2366983 2365673 -1 - 1311 ABC transporter, predicted N-acetylneuraminate-binding protein - none -
fig|6666666.229868.peg.1926 CDS CM001794.1 2367585 2366995 -3 - 591 hypothetical protein - none -
fig|6666666.229868.peg.1927 CDS CM001794.1 2367886 2367614 -1 - 273 hypothetical protein - none -
fig|6666666.229868.peg.1928 CDS CM001794.1 2367985 2368686 1 + 702 FIG00669731: hypothetical protein - none -
fig|6666666.229868.peg.1929 CDS CM001794.1 2370185 2368683 -2 - 1503 Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain - none -
fig|6666666.229868.peg.1930 CDS CM001794.1 2370560 2370742 2 + 183 hypothetical protein - none -
fig|6666666.229868.peg.1931 CDS CM001794.1 2370745 2371143 1 + 399 hypothetical protein - none -
fig|6666666.229868.peg.1932 CDS CM001794.1 2371272 2374118 3 + 2847 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis
fig|6666666.229868.peg.1933 CDS CM001794.1 2374145 2374705 2 + 561 Hypothetical protein ywlG - none -
fig|6666666.229868.peg.1934 CDS CM001794.1 2376201 2374717 -3 - 1485 Periplasmic [Fe] hydrogenase (EC 1.12.7.2) - none -
fig|6666666.229868.peg.1935 CDS CM001794.1 2376409 2377362 1 + 954 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.1936 CDS CM001794.1 2377372 2378289 1 + 918 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.229868.peg.1937 CDS CM001794.1 2378308 2379903 1 + 1596 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.1938 CDS CM001794.1 2379955 2380941 1 + 987 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.1939 CDS CM001794.1 2380931 2381902 2 + 972 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.1940 CDS CM001794.1 2381920 2382354 1 + 435 OsmC family protein - none -
fig|6666666.229868.peg.1941 CDS CM001794.1 2382409 2382921 1 + 513 hypothetical protein - none -
fig|6666666.229868.peg.1942 CDS CM001794.1 2383169 2384050 2 + 882 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229868.peg.1943 CDS CM001794.1 2384065 2384889 1 + 825 Type II restriction enzyme MjaIII (EC 3.1.21.4) - none -
fig|6666666.229868.peg.1944 CDS CM001794.1 2384895 2385779 3 + 885 DNA modification methyltransferase (EC 2.1.1.-) - none -
fig|6666666.229868.peg.1945 CDS CM001794.1 2385825 2387138 3 + 1314 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.229868.peg.1946 CDS CM001794.1 2387177 2388277 2 + 1101 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.229868.peg.1947 CDS CM001794.1 2388329 2389492 2 + 1164 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229868.peg.1948 CDS CM001794.1 2389489 2390613 1 + 1125 hypothetical protein - none -
fig|6666666.229868.peg.1949 CDS CM001794.1 2391462 2390659 -3 - 804 hypothetical protein - none -
fig|6666666.229868.peg.1950 CDS CM001794.1 2393119 2391554 -1 - 1566 choline/carnitine/betaine transporter family protein - none -
fig|6666666.229868.peg.1951 CDS CM001794.1 2395061 2393286 -2 - 1776 Cholinephosphate cytidylyltransferase (EC 2.7.7.15) / Choline kinase (EC 2.7.1.32) - none -
fig|6666666.229868.peg.1952 CDS CM001794.1 2395253 2396677 2 + 1425 Na(+)-linked D-alanine glycine permease - none -
fig|6666666.229868.peg.1953 CDS CM001794.1 2396740 2397135 1 + 396 GrdX protein - none -
fig|6666666.229868.peg.1954 CDS CM001794.1 2397350 2397183 -2 - 168 hypothetical protein - none -
fig|6666666.229868.peg.1955 CDS CM001794.1 2397675 2397556 -3 - 120 hypothetical protein - none -
fig|6666666.229868.peg.1956 CDS CM001794.1 2399268 2397916 -3 - 1353 Phage (Mu-like) virion morphogenesis protein - none -
fig|6666666.229868.peg.1957 CDS CM001794.1 2400695 2399454 -2 - 1242 Mu-like prophage FluMu protein gp29 - none -
fig|6666666.229868.peg.1958 CDS CM001794.1 2402219 2400699 -2 - 1521 Phage protein - none -
fig|6666666.229868.peg.1959 CDS CM001794.1 2402755 2402219 -1 - 537 hypothetical protein - none -
fig|6666666.229868.peg.1960 CDS CM001794.1 2403063 2402773 -3 - 291 hypothetical protein - none -
fig|6666666.229868.peg.1961 CDS CM001794.1 2403452 2403060 -2 - 393 hypothetical protein - none -
fig|6666666.229868.peg.1962 CDS CM001794.1 2403703 2403455 -1 - 249 hypothetical protein - none -
fig|6666666.229868.peg.1963 CDS CM001794.1 2404010 2403714 -2 - 297 hypothetical protein - none -
fig|6666666.229868.peg.1964 CDS CM001794.1 2404284 2403994 -3 - 291 hypothetical protein - none -
fig|6666666.229868.peg.1965 CDS CM001794.1 2404868 2404314 -2 - 555 FIG01032557: hypothetical protein - none -
fig|6666666.229868.peg.1966 CDS CM001794.1 2405194 2404979 -1 - 216 hypothetical protein - none -
fig|6666666.229868.peg.1967 CDS CM001794.1 2405823 2405368 -3 - 456 hypothetical protein - none -
fig|6666666.229868.peg.1968 CDS CM001794.1 2406405 2405893 -3 - 513 host-nuclease inhibitor protein Gam, putative - none -
fig|6666666.229868.peg.1969 CDS CM001794.1 2406637 2406440 -1 - 198 hypothetical protein - none -
fig|6666666.229868.peg.1970 CDS CM001794.1 2407410 2406688 -3 - 723 hypothetical protein - none -
fig|6666666.229868.peg.1971 CDS CM001794.1 2408355 2407414 -3 - 942 DNA transposition protein Phage replication
fig|6666666.229868.peg.1972 CDS CM001794.1 2410235 2408337 -2 - 1899 Transposase - none -
fig|6666666.229868.peg.1973 CDS CM001794.1 2410552 2410232 -1 - 321 hypothetical protein - none -
fig|6666666.229868.peg.1974 CDS CM001794.1 2410730 2410536 -2 - 195 hypothetical protein - none -
fig|6666666.229868.peg.1975 CDS CM001794.1 2411371 2410715 -1 - 657 hypothetical protein - none -
fig|6666666.229868.peg.1976 CDS CM001794.1 2411575 2411375 -1 - 201 hypothetical protein - none -
fig|6666666.229868.peg.1977 CDS CM001794.1 2411893 2411576 -1 - 318 hypothetical protein - none -
fig|6666666.229868.peg.1978 CDS CM001794.1 2412142 2411909 -1 - 234 hypothetical protein - none -
fig|6666666.229868.peg.1979 CDS CM001794.1 2412341 2412808 2 + 468 hypothetical protein - none -
fig|6666666.229868.peg.1980 CDS CM001794.1 2413082 2412783 -2 - 300 hypothetical protein - none -
fig|6666666.229868.peg.1981 CDS CM001794.1 2413252 2413106 -1 - 147 hypothetical protein - none -
fig|6666666.229868.peg.1982 CDS CM001794.1 2413492 2413322 -1 - 171 hypothetical protein - none -
fig|6666666.229868.peg.1983 CDS CM001794.1 2413769 2414785 2 + 1017 hypothetical protein - none -
fig|6666666.229868.peg.1984 CDS CM001794.1 2414947 2415471 1 + 525 hypothetical protein - none -
fig|6666666.229868.peg.1985 CDS CM001794.1 2415620 2416615 2 + 996 Phage protein - none -
fig|6666666.229868.peg.1986 CDS CM001794.1 2416644 2417003 3 + 360 hypothetical protein - none -
fig|6666666.229868.peg.1987 CDS CM001794.1 2417003 2417995 2 + 993 hypothetical protein - none -
fig|6666666.229868.peg.1988 CDS CM001794.1 2418019 2418492 1 + 474 hypothetical protein - none -
fig|6666666.229868.peg.1989 CDS CM001794.1 2418503 2419129 2 + 627 hypothetical protein - none -
fig|6666666.229868.peg.1990 CDS CM001794.1 2419119 2419571 3 + 453 hypothetical protein - none -
fig|6666666.229868.peg.1991 CDS CM001794.1 2419592 2420437 2 + 846 hypothetical protein - none -
fig|6666666.229868.peg.1992 CDS CM001794.1 2420507 2420896 2 + 390 hypothetical protein - none -
fig|6666666.229868.peg.1993 CDS CM001794.1 2420914 2421078 1 + 165 hypothetical protein - none -
fig|6666666.229868.peg.1994 CDS CM001794.1 2421087 2424761 3 + 3675 Phage tail length tape-measure protein Phage tail proteins;
Phage tail proteins 2
fig|6666666.229868.peg.1995 CDS CM001794.1 2424763 2425200 1 + 438 hypothetical protein - none -
fig|6666666.229868.peg.1996 CDS CM001794.1 2425212 2425793 3 + 582 hypothetical protein - none -
fig|6666666.229868.peg.1997 CDS CM001794.1 2425799 2428165 2 + 2367 hypothetical protein - none -
fig|6666666.229868.peg.1998 CDS CM001794.1 2428177 2429013 1 + 837 probable tail fiber protein - none -
fig|6666666.229868.peg.1999 CDS CM001794.1 2430651 2431463 3 + 813 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229868.peg.2000 CDS CM001794.1 2432131 2431568 -1 - 564 hypothetical protein - none -
fig|6666666.229868.peg.2001 CDS CM001794.1 2432180 2433358 2 + 1179 HD domain protein - none -
fig|6666666.229868.peg.2002 CDS CM001794.1 2433402 2434082 3 + 681 hypothetical protein - none -
fig|6666666.229868.peg.2003 CDS CM001794.1 2434598 2434086 -2 - 513 Smr domain protein - none -
fig|6666666.229868.peg.2004 CDS CM001794.1 2435998 2434616 -1 - 1383 hypothetical protein - none -
fig|6666666.229868.peg.2005 CDS CM001794.1 2436609 2435995 -3 - 615 hypothetical protein - none -
fig|6666666.229868.peg.2006 CDS CM001794.1 2437561 2436593 -1 - 969 BatB Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.229868.peg.2007 CDS CM001794.1 2438556 2437558 -3 - 999 BatA (Bacteroides aerotolerance operon) Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.229868.peg.2008 CDS CM001794.1 2439484 2438549 -1 - 936 hypothetical protein - none -
fig|6666666.229868.peg.2009 CDS CM001794.1 2440413 2439469 -3 - 945 hypothetical protein PA3071 Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.229868.peg.2010 CDS CM001794.1 2440540 2441529 1 + 990 hypothetical protein - none -
fig|6666666.229868.peg.2011 CDS CM001794.1 2443532 2441556 -2 - 1977 ortholog to Borrelia burgdorferi BB0058 - none -
fig|6666666.229868.peg.2012 CDS CM001794.1 2444320 2443544 -1 - 777 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.229868.peg.2013 CDS CM001794.1 2444790 2444323 -3 - 468 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229868.peg.2014 CDS CM001794.1 2447086 2444783 -1 - 2304 Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog CBSS-56780.10.peg.1536
fig|6666666.229868.peg.2015 CDS CM001794.1 2448014 2447073 -2 - 942 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.229868.peg.2016 CDS CM001794.1 2448540 2448190 -3 - 351 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.229868.peg.2017 CDS CM001794.1 2448988 2448620 -1 - 369 hypothetical protein - none -
fig|6666666.229868.peg.2018 CDS CM001794.1 2449894 2449118 -1 - 777 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229868.peg.2019 CDS CM001794.1 2450004 2451689 3 + 1686 hypothetical protein - none -
fig|6666666.229868.peg.2020 CDS CM001794.1 2451871 2453979 1 + 2109 serine/threonine kinase - none -
fig|6666666.229868.peg.2021 CDS CM001794.1 2454126 2455853 3 + 1728 hypothetical protein - none -
fig|6666666.229868.peg.2022 CDS CM001794.1 2456279 2455857 -2 - 423 hypothetical protein - none -
fig|6666666.229868.peg.2023 CDS CM001794.1 2456869 2456282 -1 - 588 hypothetical - none -
fig|6666666.229868.peg.2024 CDS CM001794.1 2457393 2456866 -3 - 528 pentapeptide repeat family protein - none -
fig|6666666.229868.peg.2025 CDS CM001794.1 2458733 2457435 -2 - 1299 Surface antigen - none -
fig|6666666.229868.peg.2026 CDS CM001794.1 2458849 2459787 1 + 939 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229868.peg.2027 CDS CM001794.1 2459814 2460581 3 + 768 Zinc ABC transporter, ATP-binding protein ZnuC; Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229868.peg.2028 CDS CM001794.1 2460578 2461492 2 + 915 Manganese ABC transporter, inner membrane permease protein SitC; Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229868.peg.2029 CDS CM001794.1 2461587 2462597 3 + 1011 Manganese ABC transporter, inner membrane permease protein SitD; Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229868.peg.2030 CDS CM001794.1 2462623 2463291 1 + 669 Mn-dependent transcriptional regulator MntR; Zn-dependent transcriptional regulator TroR - none -
fig|6666666.229868.peg.2031 CDS CM001794.1 2464486 2463284 -1 - 1203 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.229868.peg.2032 CDS CM001794.1 2466935 2464500 -2 - 2436 T. pallidum predicted coding region TP0123 - none -
fig|6666666.229868.peg.2033 CDS CM001794.1 2467414 2466950 -1 - 465 Flagellar protein FliJ Flagellum
fig|6666666.229868.peg.2034 CDS CM001794.1 2468838 2467414 -3 - 1425 Flagellum-specific ATP synthase FliI Flagellar motility;
Flagellum
fig|6666666.229868.peg.2035 CDS CM001794.1 2469774 2468848 -3 - 927 Flagellar assembly protein FliH Flagellum
fig|6666666.229868.peg.2036 CDS CM001794.1 2470844 2469795 -2 - 1050 Flagellar motor switch protein FliG Flagellum
fig|6666666.229868.peg.2037 CDS CM001794.1 2472549 2470846 -3 - 1704 Flagellar M-ring protein FliF Flagellum
fig|6666666.229868.peg.2038 CDS CM001794.1 2472978 2472613 -3 - 366 Flagellar hook-basal body complex protein FliE Flagellum;
Flagellum in Campylobacter
fig|6666666.229868.peg.2039 CDS CM001794.1 2473468 2473013 -1 - 456 Flagellar basal-body rod protein FlgC Flagellum;
Flagellum in Campylobacter
fig|6666666.229868.peg.2040 CDS CM001794.1 2473911 2473492 -3 - 420 Flagellar basal-body rod protein FlgB Flagellum;
Flagellum in Campylobacter
fig|6666666.229868.peg.2041 CDS CM001794.1 2475420 2473963 -3 - 1458 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229868.peg.2042 CDS CM001794.1 2475956 2475420 -2 - 537 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229868.peg.2043 CDS CM001794.1 2476887 2475970 -3 - 918 Site-specific tyrosine recombinase Proteasome bacterial
fig|6666666.229868.peg.2044 CDS CM001794.1 2479045 2476880 -1 - 2166 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229868.peg.2045 CDS CM001794.1 2479996 2479064 -1 - 933 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229868.peg.2046 CDS CM001794.1 2480722 2480000 -1 - 723 TPR domain protein - none -
fig|6666666.229868.peg.2047 CDS CM001794.1 2481522 2480719 -3 - 804 Site-specific recombinase XerD - none -
fig|6666666.229868.peg.2048 CDS CM001794.1 2482929 2481646 -3 - 1284 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229868.peg.2049 CDS CM001794.1 2484199 2482955 -1 - 1245 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229868.peg.2050 CDS CM001794.1 2485049 2484192 -2 - 858 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229868.peg.2051 CDS CM001794.1 2486183 2485050 -2 - 1134 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229868.peg.2052 CDS CM001794.1 2487614 2486184 -2 - 1431 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229868.peg.2053 CDS CM001794.1 2487891 2487607 -3 - 285 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229868.peg.2054 CDS CM001794.1 2488840 2487893 -1 - 948 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229868.peg.2055 CDS CM001794.1 2489295 2488846 -3 - 450 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229868.peg.2056 CDS CM001794.1 2489345 2489485 2 + 141 hypothetical protein - none -
fig|6666666.229868.peg.2057 CDS CM001794.1 2489475 2491532 3 + 2058 Prolyl endopeptidase (EC 3.4.21.26) Serine endopeptidase (EC 3.4.21.-)
fig|6666666.229868.peg.2058 CDS CM001794.1 2494143 2491573 -3 - 2571 hypothetical protein - none -
fig|6666666.229868.peg.2059 CDS CM001794.1 2499670 2499509 -1 - 162 hypothetical protein - none -
fig|6666666.229868.peg.2060 CDS CM001794.1 2500287 2499865 -3 - 423 hypothetical protein - none -
fig|6666666.229868.peg.2061 CDS CM001794.1 2500500 2501657 3 + 1158 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229868.peg.2062 CDS CM001794.1 2501654 2501956 2 + 303 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229868.peg.2063 CDS CM001794.1 2501953 2503410 1 + 1458 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229868.peg.2064 CDS CM001794.1 2503498 2503998 1 + 501 hypothetical protein - none -
fig|6666666.229868.peg.2065 CDS CM001794.1 2504010 2505368 3 + 1359 Mlr2412 protein - none -
fig|6666666.229868.peg.2066 CDS CM001794.1 2506275 2505514 -3 - 762 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.2067 CDS CM001794.1 2507081 2506272 -2 - 810 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229868.peg.2068 CDS CM001794.1 2507107 2507283 1 + 177 hypothetical protein - none -
fig|6666666.229868.peg.2069 CDS CM001794.1 2508342 2507293 -3 - 1050 ABC transporter, solute-binding protein - none -
fig|6666666.229868.peg.2070 CDS CM001794.1 2508814 2508365 -1 - 450 Transcriptional regulator, MarR family - none -
fig|6666666.229868.peg.2071 CDS CM001794.1 2509798 2508821 -1 - 978 methyltransferase domain protein - none -
fig|6666666.229868.peg.2072 CDS CM001794.1 2510001 2510915 3 + 915 Heme transporter IsdDEF, lipoprotein IsdE - none -
fig|6666666.229868.peg.2073 CDS CM001794.1 2510928 2511905 3 + 978 Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3) - none -
fig|6666666.229868.peg.2074 CDS CM001794.1 2511921 2512709 3 + 789 Vitamin B12 ABC transporter, ATPase component BtuD - none -
fig|6666666.229868.peg.2075 CDS CM001794.1 2512737 2513240 3 + 504 Flavodoxin Flavodoxin
fig|6666666.229868.peg.2076 CDS CM001794.1 2513284 2514552 1 + 1269 Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent Heat shock dnaK gene cluster extended
fig|6666666.229868.peg.2077 CDS CM001794.1 2514683 2516317 2 + 1635 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229868.peg.2078 CDS CM001794.1 2516518 2517267 1 + 750 hypothetical protein - none -
fig|6666666.229868.peg.2079 CDS CM001794.1 2518541 2517456 -2 - 1086 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229868.peg.2080 CDS CM001794.1 2519191 2518568 -1 - 624 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation;
tRNA modification Bacteria
fig|6666666.229868.peg.2081 CDS CM001794.1 2519998 2519285 -1 - 714 Uncharacterized protein TP_0465 - none -
fig|6666666.229868.peg.2082 CDS CM001794.1 2521192 2520023 -1 - 1170 FIG01186896: hypothetical protein - none -
fig|6666666.229868.peg.2083 CDS CM001794.1 2523449 2521272 -2 - 2178 FIG01188156: hypothetical protein - none -
fig|6666666.229868.peg.2084 CDS CM001794.1 2524182 2523442 -3 - 741 TPR domain protein - none -
fig|6666666.229868.peg.2085 CDS CM001794.1 2524220 2525593 2 + 1374 TPR domain protein - none -
fig|6666666.229868.peg.2086 CDS CM001794.1 2525604 2526281 3 + 678 FIG01187923: hypothetical protein - none -
fig|6666666.229868.peg.2087 CDS CM001794.1 2526355 2528040 1 + 1686 Serine phosphatase RsbU, regulator of sigma subunit / Serine-protein kinase RsbW (EC 2.7.11.1) SigmaB stress responce regulation;
SigmaB stress responce regulation
fig|6666666.229868.peg.2088 CDS CM001794.1 2528066 2528404 2 + 339 Anti-sigma F factor antagonist (spoIIAA-2); Anti-sigma B factor antagonist RsbV SigmaB stress responce regulation
fig|6666666.229868.peg.2089 CDS CM001794.1 2528421 2528963 3 + 543 Serine-protein kinase RsbW (EC 2.7.11.1) SigmaB stress responce regulation
fig|6666666.229868.peg.2090 CDS CM001794.1 2529799 2528978 -1 - 822 hypothetical protein - none -
fig|6666666.229868.peg.2091 CDS CM001794.1 2530400 2529780 -2 - 621 hypothetical protein - none -
fig|6666666.229868.peg.2092 CDS CM001794.1 2530516 2531895 1 + 1380 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229868.peg.2093 CDS CM001794.1 2532085 2531936 -1 - 150 hypothetical protein - none -
fig|6666666.229868.peg.2094 CDS CM001794.1 2532113 2532421 2 + 309 Cytotoxic translational repressor of toxin-antitoxin stability system - none -
fig|6666666.229868.peg.2095 CDS CM001794.1 2532431 2532739 2 + 309 DNA-binding protein, putative - none -
fig|6666666.229868.peg.2096 CDS CM001794.1 2532872 2533543 2 + 672 hypothetical protein - none -
fig|6666666.229868.peg.2097 CDS CM001794.1 2533527 2534048 3 + 522 hypothetical protein - none -
fig|6666666.229868.peg.2098 CDS CM001794.1 2534809 2534180 -1 - 630 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229868.peg.2099 CDS CM001794.1 2536097 2534868 -2 - 1230 transporter, putative - none -
fig|6666666.229868.peg.2100 CDS CM001794.1 2537455 2536136 -1 - 1320 internalin-related protein - none -
fig|6666666.229868.peg.2101 CDS CM001794.1 2538647 2537478 -2 - 1170 Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) Arginine and Ornithine Degradation;
Arginine and Ornithine Degradation;
Polyamine Metabolism;
Polyamine Metabolism
fig|6666666.229868.peg.2102 CDS CM001794.1 2538932 2538681 -2 - 252 hypothetical protein - none -
fig|6666666.229868.peg.2103 CDS CM001794.1 2538918 2539364 3 + 447 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229868.peg.2104 CDS CM001794.1 2539400 2540887 2 + 1488 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229868.peg.2105 CDS CM001794.1 2540895 2543588 3 + 2694 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229868.peg.2106 CDS CM001794.1 2543581 2543979 1 + 399 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229868.peg.2107 CDS CM001794.1 2543994 2545067 3 + 1074 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229868.peg.2108 CDS CM001794.1 2545370 2545140 -2 - 231 hypothetical protein - none -
fig|6666666.229868.peg.2109 CDS CM001794.1 2545605 2546516 3 + 912 hypothetical protein - none -
fig|6666666.229868.peg.2110 CDS CM001794.1 2546640 2547119 3 + 480 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.2111 CDS CM001794.1 2547110 2547514 2 + 405 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.2112 CDS CM001794.1 2547531 2548046 3 + 516 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.2113 CDS CM001794.1 2548104 2549012 3 + 909 hypothetical protein - none -
fig|6666666.229868.peg.2114 CDS CM001794.1 2549016 2549870 3 + 855 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.2115 CDS CM001794.1 2550743 2549874 -2 - 870 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229868.peg.2116 CDS CM001794.1 2551906 2550767 -1 - 1140 Alanine racemase (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229868.peg.2117 CDS CM001794.1 2553637 2552060 -1 - 1578 Glycogen branching enzyme, GH-57-type, archaeal (EC 2.4.1.18) Glycogen metabolism
fig|6666666.229868.peg.2118 CDS CM001794.1 2554328 2553624 -2 - 705 hypothetical protein - none -
fig|6666666.229868.peg.2119 CDS CM001794.1 2554587 2557946 3 + 3360 hypothetical protein - none -
fig|6666666.229868.peg.2120 CDS CM001794.1 2557977 2558735 3 + 759 hypothetical protein - none -
fig|6666666.229868.peg.2121 CDS CM001794.1 2560521 2558764 -3 - 1758 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229868.peg.2122 CDS CM001794.1 2560733 2561707 2 + 975 FIG01187840: hypothetical protein - none -
fig|6666666.229868.peg.2123 CDS CM001794.1 2561722 2562402 1 + 681 hypothetical protein - none -
fig|6666666.229868.peg.2124 CDS CM001794.1 2562957 2562394 -3 - 564 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229868.peg.2125 CDS CM001794.1 2563841 2562975 -2 - 867 Protein YicC - none -
fig|6666666.229868.peg.2126 CDS CM001794.1 2565251 2563857 -2 - 1395 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229868.peg.2127 CDS CM001794.1 2565391 2566743 1 + 1353 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) Colicin V and Bacteriocin Production Cluster;
Colicin V and Bacteriocin Production Cluster;
Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229868.peg.2128 CDS CM001794.1 2568507 2567455 -3 - 1053 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229868.peg.2129 CDS CM001794.1 2569003 2568494 -1 - 510 FIG01187661: hypothetical protein - none -
fig|6666666.229868.peg.2130 CDS CM001794.1 2569905 2569024 -3 - 882 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229868.peg.2131 CDS CM001794.1 2570565 2569918 -3 - 648 PTS system, nitrogen regulatory IIA component (ptsN-2) - none -
fig|6666666.229868.peg.2132 CDS CM001794.1 2571915 2570689 -3 - 1227 metallo-beta-lactamase family protein - none -
fig|6666666.229868.peg.2133 CDS CM001794.1 2573259 2572054 -3 - 1206 Tetracycline resistance protein - none -
fig|6666666.229868.peg.2134 CDS CM001794.1 2574718 2573678 -1 - 1041 Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.229868.peg.2135 CDS CM001794.1 2575692 2574715 -3 - 978 oligopeptide/dipeptide ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.2136 CDS CM001794.1 2577099 2575705 -3 - 1395 oligopeptide/dipeptide ABC transporter, permease protein - none -
fig|6666666.229868.peg.2137 CDS CM001794.1 2578139 2577099 -2 - 1041 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2138 CDS CM001794.1 2580913 2578298 -1 - 2616 oligopeptide binding protein, putative - none -
fig|6666666.229868.peg.2139 CDS CM001794.1 2581116 2582891 3 + 1776 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2140 CDS CM001794.1 2582979 2584004 3 + 1026 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2141 CDS CM001794.1 2584005 2585021 3 + 1017 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2142 CDS CM001794.1 2585018 2586010 2 + 993 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2143 CDS CM001794.1 2586003 2587160 3 + 1158 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2144 CDS CM001794.1 2587160 2587369 2 + 210 hypothetical protein - none -
fig|6666666.229868.peg.2145 CDS CM001794.1 2587553 2588041 2 + 489 Iron-sulfur flavoprotein - none -
fig|6666666.229868.peg.2146 CDS CM001794.1 2588038 2588673 1 + 636 Multimeric flavodoxin WrbA family protein, diverged or disrupted - none -
fig|6666666.229868.peg.2147 CDS CM001794.1 2591144 2588766 -2 - 2379 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.229868.peg.2148 CDS CM001794.1 2593218 2591344 -3 - 1875 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2149 CDS CM001794.1 2595083 2593218 -2 - 1866 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.2150 CDS CM001794.1 2595431 2595724 2 + 294 hypothetical protein - none -
fig|6666666.229868.peg.2151 CDS CM001794.1 2596003 2596158 1 + 156 hypothetical protein - none -
fig|6666666.229868.peg.2152 CDS CM001794.1 2597245 2596115 -1 - 1131 serine/threonine kinase - none -
fig|6666666.229868.peg.2153 CDS CM001794.1 2597734 2599095 1 + 1362 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229868.peg.2154 CDS CM001794.1 2601174 2599096 -3 - 2079 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.2155 CDS CM001794.1 2601400 2603133 1 + 1734 TPR repeat - none -
fig|6666666.229868.peg.2156 CDS CM001794.1 2603193 2603351 3 + 159 Rubredoxin Rubrerythrin
fig|6666666.229868.peg.2157 CDS CM001794.1 2603548 2603832 1 + 285 B. burgdorferi predicted coding region BB0650 - none -
fig|6666666.229868.peg.2158 CDS CM001794.1 2604614 2603931 -2 - 684 hypothetical protein - none -
fig|6666666.229868.peg.2159 CDS CM001794.1 2606750 2604627 -2 - 2124 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229868.peg.2160 CDS CM001794.1 2607518 2607048 -2 - 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.229868.peg.2161 CDS CM001794.1 2607903 2607529 -3 - 375 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229868.peg.2162 CDS CM001794.1 2608354 2608004 -1 - 351 FIG074102: hypothetical protein - none -
fig|6666666.229868.peg.2163 CDS CM001794.1 2608604 2608341 -2 - 264 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229868.peg.2164 CDS CM001794.1 2608768 2608655 -1 - 114 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229868.peg.2165 CDS CM001794.1 2609924 2608851 -2 - 1074 FIG01187028: hypothetical protein - none -
fig|6666666.229868.peg.2166 CDS CM001794.1 2611054 2609921 -1 - 1134 possible permease - none -
fig|6666666.229868.peg.2167 CDS CM001794.1 2611507 2611073 -1 - 435 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229868.peg.2168 CDS CM001794.1 2613678 2611579 -3 - 2100 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229868.peg.2169 CDS CM001794.1 2614061 2613792 -2 - 270 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.229868.peg.2170 CDS CM001794.1 2614970 2614065 -2 - 906 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229868.peg.2171 CDS CM001794.1 2615074 2616645 1 + 1572 conserved domain protein - none -
fig|6666666.229868.peg.2172 CDS CM001794.1 2617612 2616680 -1 - 933 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229868.peg.2173 CDS CM001794.1 2619034 2617685 -1 - 1350 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229868.peg.2174 CDS CM001794.1 2619889 2619041 -1 - 849 hypothetical protein - none -
fig|6666666.229868.peg.2175 CDS CM001794.1 2620429 2619989 -1 - 441 Hsp20/alpha crystallin family protein - none -
fig|6666666.229868.peg.2176 CDS CM001794.1 2621441 2620701 -2 - 741 Ribonuclease III (EC 3.1.26.3) RNA processing and degradation, bacterial
fig|6666666.229868.peg.2177 CDS CM001794.1 2621702 2621466 -2 - 237 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229868.peg.2178 CDS CM001794.1 2623429 2622050 -1 - 1380 METHYLASPARTATE MUTASE (EC 5.4.99.1) - none -
fig|6666666.229868.peg.2179 CDS CM001794.1 2623881 2623462 -3 - 420 Methylaspartate mutase, S subunit (EC 5.4.99.1) - none -
fig|6666666.229868.peg.2180 CDS CM001794.1 2624009 2624257 2 + 249 hypothetical protein - none -
fig|6666666.229868.peg.2181 CDS CM001794.1 2624247 2625221 3 + 975 hypothetical protein - none -
fig|6666666.229868.peg.2182 CDS CM001794.1 2625218 2626246 2 + 1029 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229868.peg.2183 CDS CM001794.1 2626262 2628109 2 + 1848 Predicted gluconate TRAP family transporter, DctM subunit - none -
fig|6666666.229868.peg.2184 CDS CM001794.1 2628534 2628106 -3 - 429 hypothetical protein - none -
fig|6666666.229868.peg.2185 CDS CM001794.1 2629826 2628630 -2 - 1197 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229868.peg.2186 CDS CM001794.1 2632233 2629828 -3 - 2406 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229868.peg.2187 CDS CM001794.1 2632413 2632243 -3 - 171 hypothetical protein - none -
fig|6666666.229868.peg.2188 CDS CM001794.1 2632496 2633365 2 + 870 hypothetical protein - none -
fig|6666666.229868.peg.2189 CDS CM001794.1 2633422 2633835 1 + 414 hemerythrin-related protein - none -
fig|6666666.229868.peg.2190 CDS CM001794.1 2636368 2633915 -1 - 2454 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229868.peg.2191 CDS CM001794.1 2639660 2636439 -2 - 3222 hypothetical protein - none -
fig|6666666.229868.peg.2192 CDS CM001794.1 2642534 2639670 -2 - 2865 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229868.peg.2193 CDS CM001794.1 2642715 2644808 3 + 2094 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.2194 CDS CM001794.1 2645700 2645080 -3 - 621 Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) Flagellum
fig|6666666.229868.peg.2195 CDS CM001794.1 2646545 2645751 -2 - 795 Flagellar basal-body rod protein FlgG Flagellum
fig|6666666.229868.peg.2196 CDS CM001794.1 2647380 2646568 -3 - 813 Flagellar basal-body rod protein FlgF Flagellum
fig|6666666.229868.peg.2197 CDS CM001794.1 2647523 2647392 -2 - 132 hypothetical protein - none -
fig|6666666.229868.peg.2198 CDS CM001794.1 2647721 2648581 2 + 861 Flagellin protein FlaA Flagellum;
Flagellum in Campylobacter
fig|6666666.229868.peg.2199 CDS CM001794.1 2648917 2649609 1 + 693 Alkaline phosphatase like protein Phosphate metabolism
fig|6666666.229868.peg.2200 CDS CM001794.1 2650352 2649648 -2 - 705 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229868.peg.2201 CDS CM001794.1 2651242 2650364 -1 - 879 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229868.peg.2202 CDS CM001794.1 2651348 2651232 -2 - 117 hypothetical protein - none -
fig|6666666.229868.peg.2203 CDS CM001794.1 2652135 2651299 -3 - 837 Formate efflux transporter (TC 2.A.44 family) - none -
fig|6666666.229868.peg.2204 CDS CM001794.1 2652758 2653999 2 + 1242 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229868.peg.2205 CDS CM001794.1 2655506 2654073 -2 - 1434 Trehalase (EC 3.2.1.28) - none -
fig|6666666.229868.peg.2206 CDS CM001794.1 2655477 2655623 3 + 147 hypothetical protein - none -
fig|6666666.229868.peg.2207 CDS CM001794.1 2657453 2655624 -2 - 1830 hypothetical protein - none -
fig|6666666.229868.peg.2208 CDS CM001794.1 2657626 2659059 1 + 1434 FOG: TPR repeat - none -
fig|6666666.229868.peg.2209 CDS CM001794.1 2659067 2659711 2 + 645 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.229868.peg.2210 CDS CM001794.1 2660623 2660246 -1 - 378 FIG00671937: hypothetical protein - none -
fig|6666666.229868.peg.2211 CDS CM001794.1 2660862 2660626 -3 - 237 hypothetical protein - none -
fig|6666666.229868.peg.2212 CDS CM001794.1 2661187 2660969 -1 - 219 oligopeptide/dipeptide ABC transporter, peptide-binding protein - none -
fig|6666666.229868.peg.2213 CDS CM001794.1 2664997 2663045 -1 - 1953 oligopeptide/dipeptide ABC transporter, peptide-binding protein - none -
fig|6666666.229868.peg.2214 CDS CM001794.1 2666543 2665053 -2 - 1491 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.229868.peg.2215 CDS CM001794.1 2667567 2666545 -3 - 1023 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2216 CDS CM001794.1 2667996 2667778 -3 - 219 oligopeptide/dipeptide ABC transporter, peptide-binding protein - none -
fig|6666666.229868.peg.2217 CDS CM001794.1 2670819 2669863 -3 - 957 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2218 CDS CM001794.1 2671799 2670819 -2 - 981 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2219 CDS CM001794.1 2673823 2671886 -1 - 1938 oligopeptide/dipeptide ABC transporter, peptide-binding protein - none -
fig|6666666.229868.peg.2220 CDS CM001794.1 2675386 2673887 -1 - 1500 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.229868.peg.2221 CDS CM001794.1 2676393 2675401 -3 - 993 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2222 CDS CM001794.1 2678388 2676607 -3 - 1782 Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) / Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis
fig|6666666.229868.peg.2223 CDS CM001794.1 2679363 2678404 -3 - 960 B. burgdorferi predicted coding region BB0418 - none -
fig|6666666.229868.peg.2224 CDS CM001794.1 2679509 2680930 2 + 1422 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.229868.peg.2225 CDS CM001794.1 2680961 2682397 2 + 1437 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) CBSS-84588.1.peg.1247;
Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229868.peg.2226 CDS CM001794.1 2684513 2682516 -2 - 1998 Cell surface protein - none -
fig|6666666.229868.peg.2227 CDS CM001794.1 2685440 2684730 -2 - 711 hypothetical protein - none -
fig|6666666.229868.peg.2228 CDS CM001794.1 2686926 2686081 -3 - 846 hypothetical protein - none -
fig|6666666.229868.peg.2229 CDS CM001794.1 2686980 2687096 3 + 117 hypothetical protein - none -
fig|6666666.229868.peg.2230 CDS CM001794.1 2687145 2687822 3 + 678 DNA repair protein RadC Bacterial cell division cluster;
DNA repair, bacterial
fig|6666666.229868.peg.2231 CDS CM001794.1 2688685 2687831 -1 - 855 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental
fig|6666666.229868.peg.2232 CDS CM001794.1 2690532 2688760 -3 - 1773 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229868.peg.2233 CDS CM001794.1 2690813 2690607 -2 - 207 hypothetical protein - none -
fig|6666666.229868.peg.2234 CDS CM001794.1 2692370 2691135 -2 - 1236 Peptidase, S41 family - none -
fig|6666666.229868.peg.2235 CDS CM001794.1 2692554 2693117 3 + 564 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229868.peg.2236 CDS CM001794.1 2693393 2693181 -2 - 213 FIG01188302: hypothetical protein - none -
fig|6666666.229868.peg.2237 CDS CM001794.1 2693459 2694280 2 + 822 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229868.peg.2238 CDS CM001794.1 2694313 2695110 1 + 798 Phosphoesterase family protein - none -
fig|6666666.229868.peg.2239 CDS CM001794.1 2698565 2695146 -2 - 3420 hypothetical protein - none -
fig|6666666.229868.peg.2240 CDS CM001794.1 2699749 2698562 -1 - 1188 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229868.peg.2241 CDS CM001794.1 2701700 2699751 -2 - 1950 membrane protein, putative - none -
fig|6666666.229868.peg.2242 CDS CM001794.1 2702125 2701712 -1 - 414 hypothetical protein - none -
fig|6666666.229868.peg.2243 CDS CM001794.1 2703268 2702129 -1 - 1140 N-acetylneuraminate synthase (EC 2.5.1.56) CMP-N-acetylneuraminate Biosynthesis
fig|6666666.229868.peg.2244 CDS CM001794.1 2703553 2703359 -1 - 195 hypothetical protein - none -
fig|6666666.229868.peg.2245 CDS CM001794.1 2704604 2703693 -2 - 912 patatin family protein - none -
fig|6666666.229868.peg.2246 CDS CM001794.1 2705392 2704649 -1 - 744 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) CBSS-176299.4.peg.1996A;
Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.229868.peg.2247 CDS CM001794.1 2706188 2705394 -2 - 795 Beta-propeller domains of methanol dehydrogenase type - none -
fig|6666666.229868.peg.2248 CDS CM001794.1 2706802 2706194 -1 - 609 LemA family protein - none -
fig|6666666.229868.peg.2249 CDS CM001794.1 2707720 2706884 -1 - 837 Nucleoside ABC transporter, permease protein 2 - none -
fig|6666666.229868.peg.2250 CDS CM001794.1 2708781 2707717 -3 - 1065 Nucleoside ABC transporter, permease protein 1 - none -
fig|6666666.229868.peg.2251 CDS CM001794.1 2710322 2708778 -2 - 1545 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.2252 CDS CM001794.1 2711383 2710346 -1 - 1038 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229868.peg.2253 CDS CM001794.1 2712671 2712237 -2 - 435 hypothetical protein - none -
fig|6666666.229868.peg.2254 CDS CM001794.1 2713996 2712695 -1 - 1302 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229868.peg.2255 CDS CM001794.1 2714230 2716308 1 + 2079 Translation elongation factor G-related protein Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.229868.peg.2256 CDS CM001794.1 2718118 2717009 -1 - 1110 serine/threonine kinase - none -
fig|6666666.229868.peg.2257 CDS CM001794.1 2718392 2718195 -2 - 198 hypothetical protein - none -
fig|6666666.229868.peg.2258 CDS CM001794.1 2720243 2718516 -2 - 1728 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.229868.peg.2259 CDS CM001794.1 2720323 2720802 1 + 480 NLP/P60 family protein - none -
fig|6666666.229868.peg.2260 CDS CM001794.1 2721239 2720820 -2 - 420 hypothetical protein - none -
fig|6666666.229868.peg.2261 CDS CM001794.1 2722176 2721241 -3 - 936 hypothetical protein - none -
fig|6666666.229868.peg.2262 CDS CM001794.1 2722272 2723462 3 + 1191 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.229868.peg.2263 CDS CM001794.1 2724424 2723564 -1 - 861 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Flagellum;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229868.peg.2264 CDS CM001794.1 2724616 2724765 1 + 150 hypothetical protein - none -
fig|6666666.229868.peg.2265 CDS CM001794.1 2724765 2725031 3 + 267 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229868.peg.2266 CDS CM001794.1 2726988 2725213 -3 - 1776 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.229868.peg.2267 CDS CM001794.1 2728244 2727051 -2 - 1194 Acetate kinase (EC 2.7.2.1) CBSS-257314.1.peg.752;
Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229868.peg.2268 CDS CM001794.1 2728398 2731208 3 + 2811 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229868.peg.2269 CDS CM001794.1 2731276 2732121 1 + 846 membrane protein, putative - none -
fig|6666666.229868.peg.2270 CDS CM001794.1 2732100 2732216 3 + 117 hypothetical protein - none -
fig|6666666.229868.peg.2271 CDS CM001794.1 2732558 2733346 2 + 789 Cell surface protein - none -
fig|6666666.229868.peg.2272 CDS CM001794.1 2733538 2734554 1 + 1017 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229868.peg.2273 CDS CM001794.1 2734633 2735403 1 + 771 Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.229868.peg.2274 CDS CM001794.1 2735400 2736269 3 + 870 Phosphonate ABC transporter permease protein phnE2 (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.229868.peg.2275 CDS CM001794.1 2736266 2737081 2 + 816 Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.229868.peg.2276 CDS CM001794.1 2738376 2737171 -3 - 1206 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229868.peg.2277 CDS CM001794.1 2738639 2740522 2 + 1884 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.2278 CDS CM001794.1 2740542 2742353 3 + 1812 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.2279 CDS CM001794.1 2742782 2744575 2 + 1794 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2280 CDS CM001794.1 2744565 2746304 3 + 1740 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2281 CDS CM001794.1 2746421 2747362 2 + 942 transcriptional regulator - none -
fig|6666666.229868.peg.2282 CDS CM001794.1 2749110 2747440 -3 - 1671 Bipolar DNA helicase HerA Rad50-Mre11 DNA repair cluster
fig|6666666.229868.peg.2283 CDS CM001794.1 2750311 2749097 -1 - 1215 FIG036446: hypothetical protein Rad50-Mre11 DNA repair cluster
fig|6666666.229868.peg.2284 CDS CM001794.1 2751804 2750326 -3 - 1479 DNA METHYLASE-TYPE I RESTRICTION-MODIFICATION SYSTEM - none -
fig|6666666.229868.peg.2285 CDS CM001794.1 2753813 2751798 -2 - 2016 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229868.peg.2286 CDS CM001794.1 2753872 2754000 1 + 129 hypothetical protein - none -
fig|6666666.229868.peg.2287 CDS CM001794.1 2754849 2753965 -3 - 885 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2288 CDS CM001794.1 2755706 2754849 -2 - 858 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2289 CDS CM001794.1 2757376 2755700 -1 - 1677 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2290 CDS CM001794.1 2757353 2757583 2 + 231 hypothetical protein - none -
fig|6666666.229868.peg.2291 CDS CM001794.1 2757707 2762119 2 + 4413 hypothetical protein - none -
fig|6666666.229868.peg.2292 CDS CM001794.1 2762873 2762277 -2 - 597 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.2293 CDS CM001794.1 2764353 2762878 -3 - 1476 Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.2294 CDS CM001794.1 2765085 2764369 -3 - 717 Transmembrane component BL0694 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.2295 CDS CM001794.1 2765161 2765289 1 + 129 hypothetical protein - none -
fig|6666666.229868.peg.2296 CDS CM001794.1 2767289 2765301 -2 - 1989 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229868.peg.2297 CDS CM001794.1 2767436 2768188 2 + 753 hypothetical protein - none -
fig|6666666.229868.peg.2298 CDS CM001794.1 2768281 2768709 1 + 429 Hit Family Protein - none -
fig|6666666.229868.peg.2299 CDS CM001794.1 2770330 2768906 -1 - 1425 Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.2300 CDS CM001794.1 2771037 2770321 -3 - 717 Transmembrane component BL0694 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.2301 CDS CM001794.1 2771640 2771041 -3 - 600 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.2302 CDS CM001794.1 2773405 2771660 -1 - 1746 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.2303 CDS CM001794.1 2775192 2773405 -3 - 1788 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2304 CDS CM001794.1 2775271 2775405 1 + 135 transcriptional regulator, AraC family - none -
fig|6666666.229868.peg.2305 CDS CM001794.1 2775392 2776339 2 + 948 transcriptional regulator, AraC family - none -
fig|6666666.229868.peg.2306 CDS CM001794.1 2777148 2776357 -3 - 792 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229868.peg.2307 CDS CM001794.1 2778176 2777145 -2 - 1032 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.2308 CDS CM001794.1 2778945 2778157 -3 - 789 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229868.peg.2309 CDS CM001794.1 2779905 2779153 -3 - 753 hypothetical protein - none -
fig|6666666.229868.peg.2310 CDS CM001794.1 2779925 2780098 2 + 174 hypothetical protein - none -
fig|6666666.229868.peg.2311 CDS CM001794.1 2781006 2780077 -3 - 930 transcriptional regulator, putative - none -
fig|6666666.229868.peg.2312 CDS CM001794.1 2782708 2781074 -1 - 1635 FIG01186940: hypothetical protein - none -
fig|6666666.229868.peg.2313 CDS CM001794.1 2783508 2782864 -3 - 645 hypothetical protein - none -
fig|6666666.229868.peg.2314 CDS CM001794.1 2783673 2783915 3 + 243 hypothetical protein - none -
fig|6666666.229868.peg.2315 CDS CM001794.1 2783896 2784315 1 + 420 PIN domain protein - none -
fig|6666666.229868.peg.2316 CDS CM001794.1 2785257 2784304 -3 - 954 Uncharacterized protein TP_0910 - none -
fig|6666666.229868.peg.2317 CDS CM001794.1 2785653 2785294 -3 - 360 LSU ribosomal protein L19p - none -
fig|6666666.229868.peg.2318 CDS CM001794.1 2786377 2785646 -1 - 732 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229868.peg.2319 CDS CM001794.1 2786913 2786374 -3 - 540 16S rRNA processing protein RimM KH domain RNA binding protein YlqC;
Ribosome biogenesis bacterial
fig|6666666.229868.peg.2320 CDS CM001794.1 2787149 2786916 -2 - 234 KH domain RNA binding protein YlqC KH domain RNA binding protein YlqC
fig|6666666.229868.peg.2321 CDS CM001794.1 2787431 2787186 -2 - 246 SSU ribosomal protein S16p KH domain RNA binding protein YlqC
fig|6666666.229868.peg.2322 CDS CM001794.1 2788624 2787542 -1 - 1083 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Cobalamin synthesis
fig|6666666.229868.peg.2323 CDS CM001794.1 2788948 2788751 -1 - 198 hypothetical protein - none -
fig|6666666.229868.peg.2324 CDS CM001794.1 2789153 2789575 2 + 423 hypothetical protein - none -
fig|6666666.229868.peg.2325 CDS CM001794.1 2790375 2789671 -3 - 705 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) CBSS-314276.3.peg.1499;
RNA pseudouridine syntheses
fig|6666666.229868.peg.2326 CDS CM001794.1 2790961 2790410 -1 - 552 Segregation and condensation protein B CBSS-314276.3.peg.1499
fig|6666666.229868.peg.2327 CDS CM001794.1 2791721 2790945 -2 - 777 Segregation and condensation protein A CBSS-314276.3.peg.1499
fig|6666666.229868.peg.2328 CDS CM001794.1 2793023 2791779 -2 - 1245 RecA protein CBSS-469378.4.peg.430;
DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229868.peg.2329 CDS CM001794.1 2793116 2793280 2 + 165 hypothetical protein - none -
fig|6666666.229868.peg.2330 CDS CM001794.1 2795163 2793265 -3 - 1899 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229868.peg.2331 CDS CM001794.1 2796391 2795279 -1 - 1113 membrane protein, YbiE/YbiF family - none -
fig|6666666.229868.peg.2332 CDS CM001794.1 2797472 2796465 -2 - 1008 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) - none -
fig|6666666.229868.peg.2333 CDS CM001794.1 2797634 2798869 2 + 1236 Na(+)/H(+) antiporter, homolog - none -
fig|6666666.229868.peg.2334 CDS CM001794.1 2800724 2798946 -2 - 1779 hypothetical protein - none -
fig|6666666.229868.peg.2335 CDS CM001794.1 2801652 2800717 -3 - 936 membrane protein, putative - none -
fig|6666666.229868.peg.2336 CDS CM001794.1 2802139 2801747 -1 - 393 hypothetical protein - none -
fig|6666666.229868.peg.2337 CDS CM001794.1 2804185 2802332 -1 - 1854 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucosamine mutase (EC 5.4.2.10) Bacterial checkpoint-control-related cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229868.peg.2338 CDS CM001794.1 2804903 2804220 -2 - 684 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229868.peg.2339 CDS CM001794.1 2805398 2805243 -2 - 156 hypothetical protein - none -
fig|6666666.229868.peg.2340 CDS CM001794.1 2805564 2805692 3 + 129 hypothetical protein - none -
fig|6666666.229868.peg.2341 CDS CM001794.1 2805683 2806036 2 + 354 hypothetical protein - none -
fig|6666666.229868.peg.2342 CDS CM001794.1 2806047 2806586 3 + 540 hypothetical protein - none -
fig|6666666.229868.peg.2343 CDS CM001794.1 2806861 2807724 1 + 864 hypothetical protein - none -
fig|6666666.229868.peg.2344 CDS CM001794.1 2807721 2808125 3 + 405 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229868.peg.2345 CDS CM001794.1 2808140 2808913 2 + 774 hypothetical protein - none -
fig|6666666.229868.peg.2346 CDS CM001794.1 2808927 2809349 3 + 423 hypothetical protein - none -
fig|6666666.229868.peg.2347 CDS CM001794.1 2809355 2810107 2 + 753 Adenine-specific methyltransferase (EC 2.1.1.72) CBSS-257314.1.peg.752
fig|6666666.229868.peg.2348 CDS CM001794.1 2810121 2810429 3 + 309 hypothetical protein - none -
fig|6666666.229868.peg.2349 CDS CM001794.1 2810432 2810896 2 + 465 hypothetical protein - none -
fig|6666666.229868.peg.2350 CDS CM001794.1 2810902 2811084 1 + 183 hypothetical protein - none -
fig|6666666.229868.peg.2351 CDS CM001794.1 2811267 2811151 -3 - 117 hypothetical protein - none -
fig|6666666.229868.peg.2352 CDS CM001794.1 2811267 2811563 3 + 297 hypothetical protein - none -
fig|6666666.229868.peg.2353 CDS CM001794.1 2811560 2812156 2 + 597 hypothetical protein - none -
fig|6666666.229868.peg.2354 CDS CM001794.1 2812173 2812841 3 + 669 Mobile element protein - none -
fig|6666666.229868.peg.2355 CDS CM001794.1 2812844 2813263 2 + 420 hypothetical protein - none -
fig|6666666.229868.peg.2356 CDS CM001794.1 2813518 2814060 1 + 543 hypothetical protein - none -
fig|6666666.229868.peg.2357 CDS CM001794.1 2814074 2814940 2 + 867 main capsid protein Gp34 - none -
fig|6666666.229868.peg.2358 CDS CM001794.1 2814951 2815160 3 + 210 hypothetical protein - none -
fig|6666666.229868.peg.2359 CDS CM001794.1 2815175 2815561 2 + 387 hypothetical protein - none -
fig|6666666.229868.peg.2360 CDS CM001794.1 2815561 2815920 1 + 360 hypothetical protein - none -
fig|6666666.229868.peg.2361 CDS CM001794.1 2815913 2816281 2 + 369 Phage minor capsid protein #Fam0017 Phage capsid proteins
fig|6666666.229868.peg.2362 CDS CM001794.1 2816259 2816663 3 + 405 hypothetical protein - none -
fig|6666666.229868.peg.2363 CDS CM001794.1 2816677 2817210 1 + 534 hypothetical protein - none -
fig|6666666.229868.peg.2364 CDS CM001794.1 2817210 2817767 3 + 558 Phage protein - none -
fig|6666666.229868.peg.2365 CDS CM001794.1 2817794 2818159 2 + 366 hypothetical protein - none -
fig|6666666.229868.peg.2366 CDS CM001794.1 2818149 2819420 3 + 1272 Phage terminase, large subunit Phage packaging machinery
fig|6666666.229868.peg.2367 CDS CM001794.1 2819446 2820834 1 + 1389 Portal protein [Bacteriophage A118] - none -
fig|6666666.229868.peg.2368 CDS CM001794.1 2820839 2820979 2 + 141 hypothetical protein - none -
fig|6666666.229868.peg.2369 CDS CM001794.1 2820981 2822927 3 + 1947 Phage minor capsid protein #Fam0016 Phage capsid proteins
fig|6666666.229868.peg.2370 CDS CM001794.1 2822927 2823118 2 + 192 hypothetical protein - none -
fig|6666666.229868.peg.2371 CDS CM001794.1 2823240 2823097 -3 - 144 hypothetical protein - none -
fig|6666666.229868.peg.2372 CDS CM001794.1 2823268 2823861 1 + 594 N-acetylmuramoyl-L-alanine amidase - none -
fig|6666666.229868.peg.2373 CDS CM001794.1 2824357 2824683 1 + 327 hypothetical protein - none -
fig|6666666.229868.peg.2374 CDS CM001794.1 2824652 2824807 2 + 156 hypothetical protein - none -
fig|6666666.229868.peg.2375 CDS CM001794.1 2824817 2827504 2 + 2688 massive surface protein MspG - none -
fig|6666666.229868.peg.2376 CDS CM001794.1 2827517 2827882 2 + 366 hypothetical protein - none -
fig|6666666.229868.peg.2377 CDS CM001794.1 2827887 2828321 3 + 435 hypothetical protein - none -
fig|6666666.229868.peg.2378 CDS CM001794.1 2828399 2828698 2 + 300 hypothetical protein - none -
fig|6666666.229868.peg.2379 CDS CM001794.1 2828679 2832626 3 + 3948 Phage tail fiber protein Phage tail fiber proteins
fig|6666666.229868.peg.2380 CDS CM001794.1 2832643 2833758 1 + 1116 hypothetical protein - none -
fig|6666666.229868.peg.2381 CDS CM001794.1 2833763 2835949 2 + 2187 hypothetical protein - none -
fig|6666666.229868.peg.2382 CDS CM001794.1 2836628 2835954 -2 - 675 hypothetical protein - none -
fig|6666666.229868.peg.2383 CDS CM001794.1 2836879 2837004 1 + 126 hypothetical protein - none -
fig|6666666.229868.peg.2384 CDS CM001794.1 2837040 2837411 3 + 372 hypothetical protein - none -
fig|6666666.229868.peg.2385 CDS CM001794.1 2838751 2837408 -1 - 1344 Putative transposase y4bF - none -
fig|6666666.229868.peg.2386 CDS CM001794.1 2839302 2839108 -3 - 195 hypothetical protein - none -
fig|6666666.229868.peg.2387 CDS CM001794.1 2839485 2839318 -3 - 168 hypothetical protein - none -
fig|6666666.229868.peg.2388 CDS CM001794.1 2840527 2839673 -1 - 855 hypothetical protein - none -
fig|6666666.229868.peg.2389 CDS CM001794.1 2840669 2841889 2 + 1221 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229868.peg.2390 CDS CM001794.1 2842694 2841957 -2 - 738 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229868.peg.2391 CDS CM001794.1 2843617 2842691 -1 - 927 Probable glycolate oxidase - none -
fig|6666666.229868.peg.2392 CDS CM001794.1 2844199 2843627 -1 - 573 hypothetical protein - none -
fig|6666666.229868.peg.2393 CDS CM001794.1 2845404 2844199 -3 - 1206 lipoprotein, putative - none -
fig|6666666.229868.peg.2394 CDS CM001794.1 2846606 2845419 -2 - 1188 L-ribulose-5-phosphate 4-epimerase( EC:5.1.3.4 ) - none -
fig|6666666.229868.peg.2395 CDS CM001794.1 2847181 2846612 -1 - 570 DNA-binding response regulator - none -
fig|6666666.229868.peg.2396 CDS CM001794.1 2847904 2847236 -1 - 669 regulatory protein RecX - none -
fig|6666666.229868.peg.2397 CDS CM001794.1 2848178 2847870 -2 - 309 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.229868.peg.2398 CDS CM001794.1 2848698 2848270 -3 - 429 LSU ribosomal protein L13p (L13Ae) - none -
fig|6666666.229868.peg.2399 CDS CM001794.1 2849030 2848797 -2 - 234 hypothetical protein - none -
fig|6666666.229868.peg.2400 CDS CM001794.1 2849258 2851423 2 + 2166 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.2401 CDS CM001794.1 2852217 2851504 -3 - 714 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229868.peg.2402 CDS CM001794.1 2852961 2852275 -3 - 687 hypothetical protein - none -
fig|6666666.229868.peg.2403 CDS CM001794.1 2855139 2852968 -3 - 2172 FIG01186898: hypothetical protein - none -
fig|6666666.229868.peg.2404 CDS CM001794.1 2856027 2855284 -3 - 744 DUF124 domain-containing protein - none -
fig|6666666.229868.peg.2405 CDS CM001794.1 2858872 2856065 -1 - 2808 Pyruvate,phosphate dikinase (EC 2.7.9.1) Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229868.peg.2406 CDS CM001794.1 2859908 2858883 -2 - 1026 hypothetical protein - none -
fig|6666666.229868.peg.2407 CDS CM001794.1 2862043 2859995 -1 - 2049 cytoplasmic filament protein A (cfpA) - none -
fig|6666666.229868.peg.2408 CDS CM001794.1 2862210 2862872 3 + 663 hypothetical protein - none -
fig|6666666.229868.peg.2409 CDS CM001794.1 2862914 2864389 2 + 1476 hypothetical protein - none -
fig|6666666.229868.peg.2410 CDS CM001794.1 2864467 2865171 1 + 705 rhodanese-like domain protein - none -
fig|6666666.229868.peg.2411 CDS CM001794.1 2865380 2866696 2 + 1317 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229868.peg.2412 CDS CM001794.1 2866696 2867712 1 + 1017 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229868.peg.2413 CDS CM001794.1 2867709 2868278 3 + 570 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229868.peg.2414 CDS CM001794.1 2868279 2868938 3 + 660 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229868.peg.2415 CDS CM001794.1 2868942 2869514 3 + 573 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229868.peg.2416 CDS CM001794.1 2870901 2869876 -3 - 1026 serine/threonine kinase - none -
fig|6666666.229868.peg.2417 CDS CM001794.1 2871401 2870898 -2 - 504 hypothetical protein - none -
fig|6666666.229868.peg.2418 CDS CM001794.1 2871854 2872051 2 + 198 hypothetical protein - none -
fig|6666666.229868.peg.2419 CDS CM001794.1 2872183 2873475 1 + 1293 Aspartyl aminopeptidase (EC 3.4.11.21) - none -
fig|6666666.229868.peg.2420 CDS CM001794.1 2873491 2875377 1 + 1887 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229868.peg.2421 CDS CM001794.1 2875706 2875551 -2 - 156 hypothetical protein - none -
fig|6666666.229868.peg.2422 CDS CM001794.1 2875720 2875833 1 + 114 hypothetical protein - none -
fig|6666666.229868.peg.2423 CDS CM001794.1 2876006 2875830 -2 - 177 hypothetical protein - none -
fig|6666666.229868.peg.2424 CDS CM001794.1 2877648 2876050 -3 - 1599 UDP-N-acetylmuramoylalanyl-D-glutamate--L-ornithine ligase Peptidoglycan biosynthesis--gjo
fig|6666666.229868.peg.2425 CDS CM001794.1 2877913 2878434 1 + 522 hypothetical protein - none -
fig|6666666.229868.peg.2426 CDS CM001794.1 2878869 2878438 -3 - 432 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229868.peg.2427 CDS CM001794.1 2879278 2879946 1 + 669 transcriptional regulator, TetR family - none -
fig|6666666.229868.peg.2428 CDS CM001794.1 2880218 2882011 2 + 1794 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2429 CDS CM001794.1 2882013 2883734 3 + 1722 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2430 CDS CM001794.1 2885391 2883805 -3 - 1587 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2431 CDS CM001794.1 2886988 2885375 -1 - 1614 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2432 CDS CM001794.1 2887134 2888501 3 + 1368 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229868.peg.2433 CDS CM001794.1 2888503 2888670 1 + 168 hypothetical protein - none -
fig|6666666.229868.peg.2434 CDS CM001794.1 2888697 2889842 3 + 1146 FIG00671023: hypothetical protein - none -
fig|6666666.229868.peg.2435 CDS CM001794.1 2889832 2890302 1 + 471 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.2436 CDS CM001794.1 2890374 2890559 3 + 186 hypothetical protein - none -
fig|6666666.229868.peg.2437 CDS CM001794.1 2890594 2891142 1 + 549 phage-related hypothetical protein - none -
fig|6666666.229868.peg.2438 CDS CM001794.1 2891521 2892609 1 + 1089 RNA-2@1,3@1-PO4:RNA-5@1-OH ligase RNA 3@1-terminal phosphate cyclase
fig|6666666.229868.peg.2439 CDS CM001794.1 2894040 2892637 -3 - 1404 hypothetical protein - none -
fig|6666666.229868.peg.2440 CDS CM001794.1 2894375 2895010 2 + 636 Rrf2-linked NADH-flavin reductase - none -
fig|6666666.229868.peg.2441 CDS CM001794.1 2895132 2895566 3 + 435 Rrf2 family transcriptional regulator, group III Rrf2 family transcriptional regulators
fig|6666666.229868.peg.2442 CDS CM001794.1 2895604 2896038 1 + 435 acetyltransferase, GNAT family - none -
fig|6666666.229868.peg.2443 CDS CM001794.1 2896833 2896054 -3 - 780 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) CBSS-176299.4.peg.1996A;
Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.229868.peg.2444 CDS CM001794.1 2896935 2898260 3 + 1326 Probable glycerol transport protein Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.229868.peg.2445 CDS CM001794.1 2898580 2898296 -1 - 285 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229868.peg.2446 CDS CM001794.1 2899382 2898573 -2 - 810 Histidinol-phosphatase (EC 3.1.3.15) - none -
fig|6666666.229868.peg.2447 CDS CM001794.1 2899528 2899914 1 + 387 Probable type II DNA modification enzyme - none -
fig|6666666.229868.peg.2448 CDS CM001794.1 2899994 2900278 2 + 285 hypothetical protein - none -
fig|6666666.229868.peg.2449 CDS CM001794.1 2900546 2900328 -2 - 219 FIG01187018: hypothetical protein - none -
fig|6666666.229868.peg.2450 CDS CM001794.1 2901069 2900530 -3 - 540 LSU ribosomal protein L17p - none -
fig|6666666.229868.peg.2451 CDS CM001794.1 2902114 2901059 -1 - 1056 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229868.peg.2452 CDS CM001794.1 2902505 2902125 -2 - 381 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.229868.peg.2453 CDS CM001794.1 2902894 2902529 -1 - 366 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.229868.peg.2454 CDS CM001794.1 2904388 2903072 -1 - 1317 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229868.peg.2455 CDS CM001794.1 2904854 2904402 -2 - 453 LSU ribosomal protein L15p (L27Ae) - none -
fig|6666666.229868.peg.2456 CDS CM001794.1 2905039 2904854 -1 - 186 LSU ribosomal protein L30p (L7e) - none -
fig|6666666.229868.peg.2457 CDS CM001794.1 2905565 2905044 -2 - 522 SSU ribosomal protein S5p (S2e) - none -
fig|6666666.229868.peg.2458 CDS CM001794.1 2905843 2905574 -1 - 270 LSU ribosomal protein L18p (L5e) - none -
fig|6666666.229868.peg.2459 CDS CM001794.1 2906486 2905947 -2 - 540 LSU ribosomal protein L6p (L9e) - none -
fig|6666666.229868.peg.2460 CDS CM001794.1 2906895 2906497 -3 - 399 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.229868.peg.2461 CDS CM001794.1 2907655 2907104 -1 - 552 LSU ribosomal protein L5p (L11e) - none -
fig|6666666.229868.peg.2462 CDS CM001794.1 2907969 2907655 -3 - 315 LSU ribosomal protein L24p (L26e) - none -
fig|6666666.229868.peg.2463 CDS CM001794.1 2908347 2907979 -3 - 369 LSU ribosomal protein L14p (L23e) - none -
fig|6666666.229868.peg.2464 CDS CM001794.1 2908638 2908366 -3 - 273 SSU ribosomal protein S17p (S11e) - none -
fig|6666666.229868.peg.2465 CDS CM001794.1 2908859 2908650 -2 - 210 LSU ribosomal protein L29p (L35e) - none -
fig|6666666.229868.peg.2466 CDS CM001794.1 2909291 2908872 -2 - 420 LSU ribosomal protein L16p (L10e) - none -
fig|6666666.229868.peg.2467 CDS CM001794.1 2910013 2909294 -1 - 720 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.229868.peg.2468 CDS CM001794.1 2910264 2910016 -3 - 249 LSU ribosomal protein L22p (L17e) - none -
fig|6666666.229868.peg.2469 CDS CM001794.1 2910661 2910383 -1 - 279 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.229868.peg.2470 CDS CM001794.1 2911504 2910674 -1 - 831 LSU ribosomal protein L2p (L8e) - none -
fig|6666666.229868.peg.2471 CDS CM001794.1 2911822 2911538 -1 - 285 LSU ribosomal protein L23p (L23Ae) - none -
fig|6666666.229868.peg.2472 CDS CM001794.1 2912460 2911825 -3 - 636 LSU ribosomal protein L4p (L1e) - none -
fig|6666666.229868.peg.2473 CDS CM001794.1 2913101 2912475 -2 - 627 LSU ribosomal protein L3p (L3e) - none -
fig|6666666.229868.peg.2474 CDS CM001794.1 2913472 2913164 -1 - 309 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.229868.peg.2475 CDS CM001794.1 2914724 2913537 -2 - 1188 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229868.peg.2476 CDS CM001794.1 2914988 2915128 2 + 141 hypothetical protein - none -
fig|6666666.229868.peg.2477 CDS CM001794.1 2917539 2915254 -3 - 2286 alkaline serine protease, subtilase family protein - none -
fig|6666666.229868.peg.2478 CDS CM001794.1 2919454 2917553 -1 - 1902 protease complex-associated polypeptide - none -
fig|6666666.229868.peg.2479 CDS CM001794.1 2919882 2919490 -3 - 393 conserved domain protein - none -
fig|6666666.229868.peg.2480 CDS CM001794.1 2920552 2921547 1 + 996 Vitamin B12 ABC transporter, B12-binding component BtuF - none -
fig|6666666.229868.peg.2481 CDS CM001794.1 2921549 2922616 2 + 1068 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229868.peg.2482 CDS CM001794.1 2922616 2923377 1 + 762 Vitamin B12 ABC transporter, ATPase component BtuD - none -
fig|6666666.229868.peg.2483 CDS CM001794.1 2923467 2924942 3 + 1476 Na+/H+ antiporter family protein - none -
fig|6666666.229868.peg.2484 CDS CM001794.1 2924984 2925154 2 + 171 hypothetical protein - none -
fig|6666666.229868.peg.2485 CDS CM001794.1 2928315 2925145 -3 - 3171 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229868.peg.2486 CDS CM001794.1 2929510 2928326 -1 - 1185 FIG00410032: hypothetical protein - none -
fig|6666666.229868.peg.2487 CDS CM001794.1 271439 270681 -2 - 759 internalin-related protein - none -
fig|6666666.229868.peg.2488 CDS CM001794.1 273435 272641 -3 - 795 hypothetical protein - none -
fig|6666666.229868.peg.2489 CDS CM001794.1 274077 274790 3 + 714 FIG00668683: hypothetical protein - none -
fig|6666666.229868.peg.2490 CDS CM001794.1 275071 274814 -1 - 258 conserved domain protein - none -
fig|6666666.229868.peg.2491 CDS CM001794.1 275554 275081 -1 - 474 Flavodoxin Flavodoxin
fig|6666666.229868.peg.2492 CDS CM001794.1 276064 275651 -1 - 414 protease synthase and sporulation negative regulatory protein pai 1 - none -
fig|6666666.229868.peg.2493 CDS CM001794.1 276023 276184 2 + 162 hypothetical protein - none -
fig|6666666.229868.peg.2494 CDS CM001794.1 276672 276181 -3 - 492 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.229868.peg.2495 CDS CM001794.1 276838 276683 -1 - 156 hypothetical protein - none -
fig|6666666.229868.peg.2496 CDS CM001794.1 277209 278465 3 + 1257 putative carboxylesterase - none -
fig|6666666.229868.peg.2497 CDS CM001794.1 278560 279147 1 + 588 hypothetical protein - none -
fig|6666666.229868.peg.2498 CDS CM001794.1 279232 279783 1 + 552 hypothetical protein - none -
fig|6666666.229868.peg.2499 CDS CM001794.1 280271 280702 2 + 432 hypothetical protein - none -
fig|6666666.229868.peg.2500 CDS CM001794.1 280704 281375 3 + 672 hypothetical protein - none -
fig|6666666.229868.peg.2501 CDS CM001794.1 281431 282000 1 + 570 hypothetical protein - none -
fig|6666666.229868.peg.2502 CDS CM001794.1 282045 282761 3 + 717 conserved domain protein - none -
fig|6666666.229868.peg.2503 CDS CM001794.1 282812 283021 2 + 210 hypothetical protein - none -
fig|6666666.229868.peg.2504 CDS CM001794.1 283087 283359 1 + 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.2505 CDS CM001794.1 283356 283637 3 + 282 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.2506 CDS CM001794.1 283665 284024 3 + 360 hypothetical protein; Hypothetical gene - none -
fig|6666666.229868.peg.2507 CDS CM001794.1 284008 284640 1 + 633 hypothetical protein - none -
fig|6666666.229868.peg.2508 CDS CM001794.1 284678 285529 2 + 852 hypothetical protein - none -
fig|6666666.229868.peg.2509 CDS CM001794.1 285551 286615 2 + 1065 ankyrin repeat protein - none -
fig|6666666.229868.peg.2510 CDS CM001794.1 286798 287925 1 + 1128 FIG00668944: hypothetical protein - none -
fig|6666666.229868.peg.2511 CDS CM001794.1 288539 288661 2 + 123 hypothetical protein - none -
fig|6666666.229868.peg.2512 CDS CM001794.1 288728 289708 2 + 981 Choloylglycine hydrolase (EC 3.5.1.24) Bile hydrolysis
fig|6666666.229868.peg.2513 CDS CM001794.1 289982 290299 2 + 318 archaeal ATPase, fused to C-terminal DUF234 domain - none -
fig|6666666.229868.peg.2514 CDS CM001794.1 290345 290893 2 + 549 hypothetical protein - none -
fig|6666666.229868.peg.2515 CDS CM001794.1 291037 291234 1 + 198 DNA-binding protein, putative - none -
fig|6666666.229868.peg.2516 CDS CM001794.1 291241 291558 1 + 318 hypothetical protein - none -
fig|6666666.229868.peg.2517 CDS CM001794.1 291657 292418 3 + 762 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.229868.peg.2518 CDS CM001794.1 293721 292372 -3 - 1350 sensor histidine kinase - none -
fig|6666666.229868.peg.2519 CDS CM001794.1 294439 293753 -1 - 687 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain - none -
fig|6666666.229868.peg.2520 CDS CM001794.1 294951 294439 -3 - 513 hypothetical protein - none -
fig|6666666.229868.peg.2521 CDS CM001794.1 295182 295039 -3 - 144 hypothetical protein - none -
fig|6666666.229868.peg.2522 CDS CM001794.1 295164 295685 3 + 522 hypothetical protein - none -
fig|6666666.229868.peg.2523 CDS CM001794.1 295902 296801 3 + 900 hypothetical protein - none -
fig|6666666.229868.peg.2524 CDS CM001794.1 297417 296842 -3 - 576 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229868.peg.2525 CDS CM001794.1 297510 298307 3 + 798 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.2526 CDS CM001794.1 298323 299123 3 + 801 FIG00761799: membrane protein - none -
fig|6666666.229868.peg.2527 CDS CM001794.1 299142 299927 3 + 786 membrane protein, putative - none -
fig|6666666.229868.peg.2528 CDS CM001794.1 300117 302237 3 + 2121 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.2529 CDS CM001794.1 303085 302285 -1 - 801 membrane protein, putative - none -
fig|6666666.229868.peg.2530 CDS CM001794.1 303174 303392 3 + 219 hypothetical protein - none -
fig|6666666.229868.peg.2531 CDS CM001794.1 303402 303743 3 + 342 hypothetical protein - none -
fig|6666666.229868.peg.2532 CDS CM001794.1 305201 303765 -2 - 1437 Alpha-L-fucosidase (EC 3.2.1.51) - none -
fig|6666666.229868.peg.2533 CDS CM001794.1 305280 306911 3 + 1632 Hydroxylamine reductase (EC 1.7.-.-) Nitrosative stress
fig|6666666.229868.peg.2534 CDS CM001794.1 307607 306957 -2 - 651 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.229868.peg.2535 CDS CM001794.1 307663 308970 1 + 1308 Spermidine/putrescine-binding protein - none -
fig|6666666.229868.peg.2536 CDS CM001794.1 309026 309742 2 + 717 Ni2+-binding GTPase involved in regulation of expression and maturation of hydrogenase - none -
fig|6666666.229868.peg.2537 CDS CM001794.1 309732 310787 3 + 1056 Uncharacterized ABC transporter ATP-binding protein MJ0121 - none -
fig|6666666.229868.peg.2538 CDS CM001794.1 311150 310836 -2 - 315 hypothetical protein - none -
fig|6666666.229868.peg.2539 CDS CM001794.1 313269 311170 -3 - 2100 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229868.peg.2540 CDS CM001794.1 313514 313296 -2 - 219 hypothetical protein - none -
fig|6666666.229868.peg.2541 CDS CM001794.1 313652 315244 2 + 1593 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism
fig|6666666.229868.peg.2542 CDS CM001794.1 317351 315375 -2 - 1977 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229868.peg.2543 CDS CM001794.1 317889 317557 -3 - 333 Transposase - none -
fig|6666666.229868.peg.2544 CDS CM001794.1 318264 318133 -3 - 132 hypothetical protein - none -
fig|6666666.229868.peg.2545 CDS CM001794.1 318483 318334 -3 - 150 hypothetical protein - none -
fig|6666666.229868.peg.2546 CDS CM001794.1 318534 321251 3 + 2718 FIG01187277: hypothetical protein - none -
fig|6666666.229868.peg.2547 CDS CM001794.1 321248 322021 2 + 774 Outer membrane lipoprotein-sorting protein - none -
fig|6666666.229868.peg.2548 CDS CM001794.1 322091 323515 2 + 1425 hypothetical protein - none -
fig|6666666.229868.peg.2549 CDS CM001794.1 323619 323846 3 + 228 NifU-like domain protein - none -
fig|6666666.229868.peg.2550 CDS CM001794.1 324561 323860 -3 - 702 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229868.peg.2551 CDS CM001794.1 324807 325616 3 + 810 metallo-beta-lactamase family protein - none -
fig|6666666.229868.peg.2552 CDS CM001794.1 325851 325699 -3 - 153 hypothetical protein - none -
fig|6666666.229868.peg.2553 CDS CM001794.1 325852 326520 1 + 669 transporter, putative - none -
fig|6666666.229868.peg.2554 CDS CM001794.1 327680 326583 -2 - 1098 hypothetical protein - none -
fig|6666666.229868.peg.2555 CDS CM001794.1 328219 327695 -1 - 525 hypothetical protein - none -
fig|6666666.229868.peg.2556 CDS CM001794.1 328410 329258 3 + 849 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) - none -
fig|6666666.229868.peg.2557 CDS CM001794.1 330609 329368 -3 - 1242 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229868.peg.2558 CDS CM001794.1 330659 331402 2 + 744 tRNA(Cytosine32)-2-thiocytidine synthetase tRNA modification Bacteria
fig|6666666.229868.peg.2559 CDS CM001794.1 331451 331702 2 + 252 hypothetical protein - none -
fig|6666666.229868.peg.2560 CDS CM001794.1 332950 331718 -1 - 1233 Arginine deiminase (EC 3.5.3.6) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229868.peg.2561 CDS CM001794.1 333124 334557 1 + 1434 peptidase, M20/M25/M40 family - none -
fig|6666666.229868.peg.2562 CDS CM001794.1 334622 335104 2 + 483 Ferritin-like protein 2 - none -
fig|6666666.229868.peg.2563 CDS CM001794.1 335807 335157 -2 - 651 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229868.peg.2564 CDS CM001794.1 338845 335867 -1 - 2979 Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix (Trigonal Crystal Form) - none -
fig|6666666.229868.peg.2565 CDS CM001794.1 340373 338835 -2 - 1539 fibronectin type III domain protein - none -
fig|6666666.229868.peg.2566 CDS CM001794.1 341860 340580 -1 - 1281 S-methylmethionine permease - none -
fig|6666666.229868.peg.2567 CDS CM001794.1 342638 341913 -2 - 726 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Folate Biosynthesis
fig|6666666.229868.peg.2568 CDS CM001794.1 343672 342692 -1 - 981 hypothetical protein - none -
fig|6666666.229868.peg.2569 CDS CM001794.1 343930 344964 1 + 1035 hypothetical protein - none -
fig|6666666.229868.peg.2570 CDS CM001794.1 345010 345420 1 + 411 hypothetical protein - none -
fig|6666666.229868.peg.2571 CDS CM001794.1 345652 345801 1 + 150 hypothetical protein - none -
fig|6666666.229868.peg.2572 CDS CM001794.1 345865 346755 1 + 891 hypothetical protein - none -
fig|6666666.229868.peg.2573 CDS CM001794.1 346834 347376 1 + 543 hypothetical protein - none -
fig|6666666.229868.peg.2574 CDS CM001794.1 348550 349689 1 + 1140 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229868.peg.2575 CDS CM001794.1 349757 351226 2 + 1470 FOG: HEAT repeat - none -
fig|6666666.229868.peg.2576 CDS CM001794.1 351229 352038 1 + 810 DNA recombination and repair protein RecO DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229868.peg.2577 CDS CM001794.1 352101 353804 3 + 1704 ATP-dependent DNA helicase RecS (RecQ family) DNA repair, bacterial RecFOR pathway
fig|6666666.229868.peg.2578 CDS CM001794.1 354402 353827 -3 - 576 Rubrerythrin Oxidative stress;
Rubrerythrin
fig|6666666.229868.peg.2579 CDS CM001794.1 354722 354606 -2 - 117 bacteriocin-type signal domain protein - none -
fig|6666666.229868.peg.2580 CDS CM001794.1 355563 354673 -3 - 891 lipoprotein, putative - none -
fig|6666666.229868.peg.2581 CDS CM001794.1 357311 356160 -2 - 1152 lipoprotein, putative - none -
fig|6666666.229868.peg.2582 CDS CM001794.1 358495 357347 -1 - 1149 lipoprotein, putative - none -
fig|6666666.229868.peg.2583 CDS CM001794.1 359504 358551 -2 - 954 lipoprotein, putative - none -
fig|6666666.229868.peg.2584 CDS CM001794.1 360276 360076 -3 - 201 hypothetical protein - none -
fig|6666666.229868.peg.2585 CDS CM001794.1 361298 360321 -2 - 978 lipoprotein, putative - none -
fig|6666666.229868.peg.2586 CDS CM001794.1 362580 361309 -3 - 1272 lipoprotein, putative - none -
fig|6666666.229868.peg.2587 CDS CM001794.1 364705 362621 -1 - 2085 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229868.peg.2588 CDS CM001794.1 365582 364716 -2 - 867 peptidase, M48 family - none -
fig|6666666.229868.peg.2589 CDS CM001794.1 366058 365582 -1 - 477 protein of unknown function DUF1058 - none -
fig|6666666.229868.peg.2590 CDS CM001794.1 366313 367149 1 + 837 oxidoreductase, NAD-binding - none -
fig|6666666.229868.peg.2591 CDS CM001794.1 367163 368674 2 + 1512 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229868.peg.2592 CDS CM001794.1 370406 368787 -2 - 1620 FIG01186987: hypothetical protein - none -
fig|6666666.229868.peg.2593 CDS CM001794.1 372178 370535 -1 - 1644 major outer sheath protein - none -
fig|6666666.229868.peg.2594 CDS CM001794.1 372199 372339 1 + 141 hypothetical protein - none -
fig|6666666.229868.peg.2595 CDS CM001794.1 372657 372361 -3 - 297 hypothetical protein - none -
fig|6666666.229868.peg.2596 CDS CM001794.1 373267 375660 1 + 2394 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229868.peg.2597 CDS CM001794.1 375694 376614 1 + 921 Chromosome initiation inhibitor LysR-family proteins in Escherichia coli
fig|6666666.229868.peg.2598 CDS CM001794.1 378073 376682 -1 - 1392 zinc carboxypeptidase family protein - none -
fig|6666666.229868.peg.2599 CDS CM001794.1 379674 378091 -3 - 1584 ABC transporter, periplasmic substrate-binding protein - none -
fig|6666666.229868.peg.2600 CDS CM001794.1 380670 379693 -3 - 978 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2601 CDS CM001794.1 381635 380667 -2 - 969 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.229868.peg.2602 CDS CM001794.1 382492 381638 -1 - 855 peptide ABC transporter, permease protein, putative - none -
fig|6666666.229868.peg.2603 CDS CM001794.1 383466 382504 -3 - 963 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.229868.peg.2604 CDS CM001794.1 383669 384316 2 + 648 hypothetical protein - none -
fig|6666666.229868.peg.2605 CDS CM001794.1 384480 385652 3 + 1173 hypothetical protein - none -
fig|6666666.229868.peg.2606 CDS CM001794.1 385649 385897 2 + 249 hypothetical protein - none -
fig|6666666.229868.peg.2607 CDS CM001794.1 386205 385945 -3 - 261 hypothetical protein - none -
fig|6666666.229868.peg.2608 CDS CM001794.1 387476 386202 -2 - 1275 Related to 2-hydroxyglutaryl-CoA dehydratase, beta subunit - none -
fig|6666666.229868.peg.2609 CDS CM001794.1 388275 387478 -3 - 798 hypothetical protein - none -
fig|6666666.229868.peg.2610 CDS CM001794.1 389021 388272 -2 - 750 Benzoyl-CoA reductase subunit BadG (EC 1.3.99.15) - none -
fig|6666666.229868.peg.2611 CDS CM001794.1 389588 389040 -2 - 549 hypothetical protein - none -
fig|6666666.229868.peg.2612 CDS CM001794.1 390945 389593 -3 - 1353 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) Glycerol and Glycerol-3-phosphate Uptake and Utilization
fig|6666666.229868.peg.2613 CDS CM001794.1 391775 390957 -2 - 819 N-Acetyl-D-glucosamine ABC transport system, permease protein 2 - none -
fig|6666666.229868.peg.2614 CDS CM001794.1 392674 391772 -1 - 903 N-Acetyl-D-glucosamine ABC transport system, permease protein 1 - none -
fig|6666666.229868.peg.2615 CDS CM001794.1 393750 392674 -3 - 1077 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229868.peg.2616 CDS CM001794.1 393935 394951 2 + 1017 Putative transport system permease protein - none -
fig|6666666.229868.peg.2617 CDS CM001794.1 394971 395195 3 + 225 hypothetical protein - none -
fig|6666666.229868.peg.2618 CDS CM001794.1 395207 396790 2 + 1584 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2619 CDS CM001794.1 396907 397857 1 + 951 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2620 CDS CM001794.1 397859 398671 2 + 813 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2621 CDS CM001794.1 398676 399650 3 + 975 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2622 CDS CM001794.1 399650 400642 2 + 993 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2623 CDS CM001794.1 400727 402307 2 + 1581 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2624 CDS CM001794.1 402376 403320 1 + 945 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2625 CDS CM001794.1 403322 404167 2 + 846 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) ABC transporter dipeptide (TC 3.A.1.5.2)
fig|6666666.229868.peg.2626 CDS CM001794.1 404151 405119 3 + 969 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2627 CDS CM001794.1 405132 406085 3 + 954 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229868.peg.2628 CDS CM001794.1 406160 407176 2 + 1017 Ferric iron ABC transporter, iron-binding protein - none -
fig|6666666.229868.peg.2629 CDS CM001794.1 408584 407223 -2 - 1362 ABC transporter - none -
fig|6666666.229868.peg.2630 CDS CM001794.1 409382 408825 -2 - 558 hypothetical protein - none -
fig|6666666.229868.peg.2631 CDS CM001794.1 409821 409351 -3 - 471 hypothetical protein - none -
fig|6666666.229868.peg.2632 CDS CM001794.1 410037 409825 -3 - 213 hypothetical protein - none -
fig|6666666.229868.peg.2633 CDS CM001794.1 410498 410049 -2 - 450 hypothetical protein - none -
fig|6666666.229868.peg.2634 CDS CM001794.1 411082 410528 -1 - 555 hypothetical protein - none -
fig|6666666.229868.peg.2635 CDS CM001794.1 411458 411069 -2 - 390 hypothetical protein - none -
fig|6666666.229868.peg.2636 CDS CM001794.1 411752 411480 -2 - 273 hypothetical protein - none -
fig|6666666.229868.peg.2637 CDS CM001794.1 412233 411832 -3 - 402 hypothetical protein - none -
fig|6666666.229868.peg.2638 CDS CM001794.1 412587 414209 3 + 1623 Ferric iron ABC transporter, permease protein - none -
fig|6666666.229868.peg.2639 CDS CM001794.1 414232 415182 1 + 951 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.2640 CDS CM001794.1 415179 416456 3 + 1278 glycosyl transferase, group 1 family protein - none -
fig|6666666.229868.peg.2641 CDS CM001794.1 419365 416510 -1 - 2856 hypothetical protein - none -
fig|6666666.229868.peg.2642 CDS CM001794.1 419752 421323 1 + 1572 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2643 CDS CM001794.1 421298 422842 2 + 1545 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2644 CDS CM001794.1 424737 422890 -3 - 1848 Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23); putative Triacylglycerol metabolism;
Triacylglycerol metabolism
fig|6666666.229868.peg.2645 CDS CM001794.1 426358 424910 -1 - 1449 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229868.peg.2646 CDS CM001794.1 426543 428099 3 + 1557 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.2647 CDS CM001794.1 428169 428612 3 + 444 transcriptional regulator, MerR family - none -
fig|6666666.229868.peg.2648 CDS CM001794.1 428707 430650 1 + 1944 bacterial Ig-like domain protein - none -
fig|6666666.229868.peg.2649 CDS CM001794.1 432112 430739 -1 - 1374 Sodium/glutamate symporter - none -
fig|6666666.229868.peg.2650 CDS CM001794.1 432356 434050 2 + 1695 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2651 CDS CM001794.1 434052 435959 3 + 1908 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2652 CDS CM001794.1 436350 437201 3 + 852 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229868.peg.2653 CDS CM001794.1 437242 437877 1 + 636 iron-sulfur flavoprotein - none -
fig|6666666.229868.peg.2654 CDS CM001794.1 437897 438253 2 + 357 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.229868.peg.2655 CDS CM001794.1 438930 438358 -3 - 573 hypothetical protein - none -
fig|6666666.229868.peg.2656 CDS CM001794.1 439568 439014 -2 - 555 Glutathione-regulated potassium-efflux system ancillary protein KefG Potassium homeostasis
fig|6666666.229868.peg.2657 CDS CM001794.1 439647 440537 3 + 891 2-dehydropantoate 2-reductase (EC 1.1.1.169) Coenzyme A Biosynthesis
fig|6666666.229868.peg.2658 CDS CM001794.1 440610 441212 3 + 603 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229868.peg.2659 CDS CM001794.1 441758 441306 -2 - 453 Ribose 5-phosphate isomerase B (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229868.peg.2660 CDS CM001794.1 442017 442964 3 + 948 L-lactate dehydrogenase (EC 1.1.1.27) Fermentations: Lactate
fig|6666666.229868.peg.2661 CDS CM001794.1 444394 443027 -1 - 1368 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229868.peg.2662 CDS CM001794.1 446873 444396 -2 - 2478 Phosphoenolpyruvate synthase (EC 2.7.9.2) Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229868.peg.2663 CDS CM001794.1 447509 446913 -2 - 597 transcriptional regulator, TetR family - none -
fig|6666666.229868.peg.2664 CDS CM001794.1 447777 449966 3 + 2190 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.2665 CDS CM001794.1 450119 452272 2 + 2154 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.2666 CDS CM001794.1 452428 452649 1 + 222 transcriptional regulator, AbrB family - none -
fig|6666666.229868.peg.2667 CDS CM001794.1 452639 453769 2 + 1131 hydrolase, alpha/beta fold family - none -
fig|6666666.229868.peg.2668 CDS CM001794.1 453870 455474 3 + 1605 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229868.peg.2669 CDS CM001794.1 455476 458013 1 + 2538 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229868.peg.2670 CDS CM001794.1 458913 458026 -3 - 888 Fructose-bisphosphate aldolase class I (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229868.peg.2671 CDS CM001794.1 459681 459064 -3 - 618 transcriptional regulator, TetR family - none -
fig|6666666.229868.peg.2672 CDS CM001794.1 460238 459768 -2 - 471 methyl-accepting chemotaxis protein - none -
fig|6666666.229868.peg.2673 CDS CM001794.1 460495 461283 1 + 789 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) - none -
fig|6666666.229868.peg.2674 CDS CM001794.1 461290 462408 1 + 1119 Acid membrane antigen A - none -
fig|6666666.229868.peg.2675 CDS CM001794.1 462420 463475 3 + 1056 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229868.peg.2676 CDS CM001794.1 463589 464341 2 + 753 hypothetical protein - none -
fig|6666666.229868.peg.2677 CDS CM001794.1 465825 464470 -3 - 1356 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229868.peg.2678 CDS CM001794.1 466557 465907 -3 - 651 transcriptional regulator, TetR family - none -
fig|6666666.229868.peg.2679 CDS CM001794.1 469219 468545 -1 - 675 CRISPR-associated protein, Csn2 family CRISPRs
fig|6666666.229868.peg.2680 CDS CM001794.1 469521 469216 -3 - 306 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229868.peg.2681 CDS CM001794.1 470398 469526 -1 - 873 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229868.peg.2682 CDS CM001794.1 474582 470395 -3 - 4188 CRISPR-associated protein, Csn1 family CRISPRs
fig|6666666.229868.peg.2683 CDS CM001794.1 474884 476764 2 + 1881 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229868.peg.2684 CDS CM001794.1 477411 476809 -3 - 603 hypothetical protein - none -
fig|6666666.229868.peg.2685 CDS CM001794.1 478018 477398 -1 - 621 hypothetical protein - none -
fig|6666666.229868.peg.2686 CDS CM001794.1 478458 479762 3 + 1305 membrane protein, putative - none -
fig|6666666.229868.peg.2687 CDS CM001794.1 479759 480406 2 + 648 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229868.peg.2688 CDS CM001794.1 480418 481737 1 + 1320 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.229868.peg.2689 CDS CM001794.1 481734 483032 3 + 1299 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.229868.peg.2690 CDS CM001794.1 484002 482995 -3 - 1008 MoxR-like ATPase in aerotolerance operon Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.229868.peg.2691 CDS CM001794.1 484384 484070 -1 - 315 hypothetical protein - none -
fig|6666666.229868.peg.2692 CDS CM001794.1 484810 484430 -1 - 381 hypothetical protein - none -
fig|6666666.229868.peg.2693 CDS CM001794.1 485048 486637 2 + 1590 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.2694 CDS CM001794.1 488519 486735 -2 - 1785 probable ABC transporter - none -
fig|6666666.229868.peg.2695 CDS CM001794.1 489380 488628 -2 - 753 hypothetical protein - none -
fig|6666666.229868.peg.2696 CDS CM001794.1 490083 489391 -3 - 693 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229868.peg.2697 CDS CM001794.1 490298 490098 -2 - 201 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229868.peg.2698 CDS CM001794.1 491823 490291 -3 - 1533 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229868.peg.2699 CDS CM001794.1 492678 491842 -3 - 837 Thymidylate synthase thyX (EC 2.1.1.-) Folate Biosynthesis
fig|6666666.229868.peg.2700 CDS CM001794.1 493838 492726 -2 - 1113 hypothetical protein - none -
fig|6666666.229868.peg.2701 CDS CM001794.1 495137 494049 -2 - 1089 hypothetical protein - none -
fig|6666666.229868.peg.2702 CDS CM001794.1 496057 495134 -1 - 924 hypothetical protein - none -
fig|6666666.229868.peg.2703 CDS CM001794.1 496125 497954 3 + 1830 signal peptide peptidase SppA, 36K type - none -
fig|6666666.229868.peg.2704 CDS CM001794.1 497993 499099 2 + 1107 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229868.peg.2705 CDS CM001794.1 500838 499282 -3 - 1557 hypothetical protein - none -
fig|6666666.229868.peg.2706 CDS CM001794.1 501587 500964 -2 - 624 hypothetical protein - none -
fig|6666666.229868.peg.2707 CDS CM001794.1 502397 502116 -2 - 282 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.2708 CDS CM001794.1 502672 502394 -1 - 279 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229868.peg.2709 CDS CM001794.1 503548 502745 -1 - 804 tetracenomycin polyketide synthesis O-methyltransferase TcmP, putative - none -
fig|6666666.229868.peg.2710 CDS CM001794.1 505052 503622 -2 - 1431 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229868.peg.2711 CDS CM001794.1 505248 506147 3 + 900 Glutamate formiminotransferase (EC 2.1.2.5) @ Glutamate formyltransferase 5-FCL-like protein;
Histidine Degradation
fig|6666666.229868.peg.2712 CDS CM001794.1 506334 508781 3 + 2448 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229868.peg.2713 CDS CM001794.1 508791 509528 3 + 738 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229868.peg.2714 CDS CM001794.1 509580 510983 3 + 1404 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229868.peg.2715 CDS CM001794.1 510987 511826 3 + 840 Protein involved in catabolism of external DNA DNA processing cluster
fig|6666666.229868.peg.2716 CDS CM001794.1 512055 512207 3 + 153 hypothetical protein - none -
fig|6666666.229868.peg.2717 CDS CM001794.1 512355 512930 3 + 576 hypothetical protein - none -
fig|6666666.229868.peg.2718 CDS CM001794.1 512957 513877 2 + 921 hypothetical protein - none -
fig|6666666.229868.peg.2719 CDS CM001794.1 513939 515624 3 + 1686 probable ABC transporter - none -
fig|6666666.229868.peg.2720 CDS CM001794.1 515621 517231 2 + 1611 ABC transporter, ATP-binding protein - none -
fig|6666666.229868.peg.2721 CDS CM001794.1 519327 517276 -3 - 2052 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229868.peg.2722 CDS CM001794.1 519571 520173 1 + 603 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.2723 CDS CM001794.1 520174 520878 1 + 705 Transmembrane component BL0694 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.2724 CDS CM001794.1 520875 522344 3 + 1470 Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.2725 CDS CM001794.1 522509 522706 2 + 198 hypothetical protein - none -
fig|6666666.229868.peg.2726 CDS CM001794.1 522703 523104 1 + 402 PIN domain protein - none -
fig|6666666.229868.peg.2727 CDS CM001794.1 523217 524191 2 + 975 Alpha/beta hydrolase fold - none -
fig|6666666.229868.peg.2728 CDS CM001794.1 525002 526180 2 + 1179 hypothetical protein - none -
fig|6666666.229868.peg.2729 CDS CM001794.1 526276 526902 1 + 627 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229868.peg.2730 CDS CM001794.1 527622 526957 -3 - 666 CAAX amino terminal protease - none -
fig|6666666.229868.peg.2731 CDS CM001794.1 527883 529676 3 + 1794 ABC-type multidrug transport system, ATPase and permease components - none -
fig|6666666.229868.peg.2732 CDS CM001794.1 529673 531439 2 + 1767 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229868.peg.2733 CDS CM001794.1 531436 532050 1 + 615 hypothetical protein - none -
fig|6666666.229868.peg.2734 CDS CM001794.1 532225 533022 1 + 798 hypothetical protein - none -
fig|6666666.229868.peg.2735 CDS CM001794.1 533332 533547 1 + 216 hypothetical protein - none -
fig|6666666.229868.peg.2736 CDS CM001794.1 533859 534401 3 + 543 GCN5-related N-acetyltransferase - none -
fig|6666666.229868.peg.2737 CDS CM001794.1 534499 535572 1 + 1074 hypothetical protein - none -
fig|6666666.229868.peg.2738 CDS CM001794.1 536108 535650 -2 - 459 Flavodoxin Flavodoxin
fig|6666666.229868.peg.2739 CDS CM001794.1 537016 536105 -1 - 912 iron-sulfur cluster-binding protein - none -
fig|6666666.229868.peg.2740 CDS CM001794.1 537625 537161 -1 - 465 Transcriptional regulator, MarR family - none -
fig|6666666.229868.peg.2741 CDS CM001794.1 537888 538640 3 + 753 SAM-dependent methyltransferases - none -
fig|6666666.229868.peg.2742 CDS CM001794.1 538662 539276 3 + 615 Substrate-specific component BL0695 of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.2743 CDS CM001794.1 539331 540029 3 + 699 Transmembrane component BL0694 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.2744 CDS CM001794.1 540029 541453 2 + 1425 Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.peg.2745 CDS CM001794.1 541777 541529 -1 - 249 TfoX N-terminal domain family protein - none -
fig|6666666.229868.peg.2746 CDS CM001794.1 542301 541873 -3 - 429 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229868.peg.2747 CDS CM001794.1 542475 542353 -3 - 123 hypothetical protein - none -
fig|6666666.229868.peg.2748 CDS CM001794.1 543694 542453 -1 - 1242 FIG00848616: hypothetical protein - none -
fig|6666666.229868.peg.2749 CDS CM001794.1 544092 544226 3 + 135 hypothetical protein - none -
fig|6666666.229868.peg.2750 CDS CM001794.1 544238 545617 2 + 1380 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229868.peg.2751 CDS CM001794.1 545699 547024 2 + 1326 sodium-dependent transporter, putative - none -
fig|6666666.229868.peg.2752 CDS CM001794.1 547754 547191 -2 - 564 flavoredoxin, putative - none -
fig|6666666.229868.peg.2753 CDS CM001794.1 548225 547857 -2 - 369 probable uroporphyrin-III c-methyltransferase (EC 2.1.1.107) - none -
fig|6666666.229868.peg.2754 CDS CM001794.1 548553 549122 3 + 570 Transcriptional regulator, TetR family - none -
fig|6666666.229868.peg.2755 CDS CM001794.1 549259 550977 1 + 1719 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229868.peg.2756 CDS CM001794.1 550989 552761 3 + 1773 ABC transporter ATP-binding protein - none -
fig|6666666.229868.peg.2757 CDS CM001794.1 552763 554610 1 + 1848 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229868.peg.2758 CDS CM001794.1 554928 556652 3 + 1725 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229868.peg.2759 CDS CM001794.1 556746 557081 3 + 336 hypothetical protein - none -
fig|6666666.229868.peg.2760 CDS CM001794.1 557304 558044 3 + 741 Mobile element protein - none -
fig|6666666.229868.peg.2761 CDS CM001794.1 558257 558099 -2 - 159 FIG00520426: hypothetical protein - none -
fig|6666666.229868.peg.2762 CDS CM001794.1 559430 558720 -2 - 711 Bacitracin transport permease protein BCRB - none -
fig|6666666.229868.peg.2763 CDS CM001794.1 560157 559414 -3 - 744 Methionine ABC transporter ATP-binding protein Methionine Degradation
fig|6666666.229868.peg.2764 CDS CM001794.1 560815 560126 -1 - 690 Transcriptional regulator, TetR family - none -
fig|6666666.229868.peg.2765 CDS CM001794.1 561237 561674 3 + 438 Transmembrane component BL0694 of energizing module of predicted ECF transporter ECF class transporters
fig|6666666.229868.rna.1 RNA CM001794.1 153447 153375 -3 - 73 tRNA-Ala-CGC tRNAs
fig|6666666.229868.rna.2 RNA CM001794.1 224960 222052 -2 - 2909 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229868.rna.3 RNA CM001794.1 225229 225156 -1 - 74 tRNA-Ala-TGC - none -
fig|6666666.229868.rna.4 RNA CM001794.1 226942 225431 -1 - 1512 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229868.rna.5 RNA CM001794.1 598266 598350 3 + 85 tRNA-Ser-TGA - none -
fig|6666666.229868.rna.6 RNA CM001794.1 598377 598463 3 + 87 tRNA-Pseudo-GCT - none -
fig|6666666.229868.rna.7 RNA CM001794.1 598475 598548 2 + 74 tRNA-Arg-GCG tRNAs
fig|6666666.229868.rna.8 RNA CM001794.1 598590 598674 3 + 85 tRNA-Pseudo-CGA - none -
fig|6666666.229868.rna.9 RNA CM001794.1 598722 598808 3 + 87 tRNA-Ser-GGA tRNAs
fig|6666666.229868.rna.10 RNA CM001794.1 814194 814123 -3 - 72 tRNA-Cys-GCA tRNAs
fig|6666666.229868.rna.11 RNA CM001794.1 852343 852272 -1 - 72 tRNA-Glu-CTC - none -
fig|6666666.229868.rna.12 RNA CM001794.1 852432 852362 -3 - 71 tRNA-Gln-CTG - none -
fig|6666666.229868.rna.13 RNA CM001794.1 880120 880048 -1 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.229868.rna.14 RNA CM001794.1 1004070 1004142 3 + 73 tRNA-Lys-CTT - none -
fig|6666666.229868.rna.15 RNA CM001794.1 1061322 1061404 3 + 83 tRNA-Leu-CAA tRNAs
fig|6666666.229868.rna.16 RNA CM001794.1 1068395 1068469 2 + 75 tRNA-Asp-GTC - none -
fig|6666666.229868.rna.17 RNA CM001794.1 1068524 1068595 2 + 72 tRNA-Pro-CGG tRNAs
fig|6666666.229868.rna.18 RNA CM001794.1 1132416 1132488 3 + 73 tRNA-Lys-TTT - none -
fig|6666666.229868.rna.19 RNA CM001794.1 1228368 1228440 3 + 73 tRNA-Thr-GGT - none -
fig|6666666.229868.rna.20 RNA CM001794.1 1228696 1228768 1 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.229868.rna.21 RNA CM001794.1 1344270 1344197 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229868.rna.22 RNA CM001794.1 1354574 1354501 -2 - 74 tRNA-Arg-TCT - none -
fig|6666666.229868.rna.23 RNA CM001794.1 1354660 1354588 -1 - 73 tRNA-Pro-TGG - none -
fig|6666666.229868.rna.24 RNA CM001794.1 1610571 1610498 -3 - 74 tRNA-Val-TAC - none -
fig|6666666.229868.rna.25 RNA CM001794.1 1630741 1630658 -1 - 84 tRNA-Leu-TAA - none -
fig|6666666.229868.rna.26 RNA CM001794.1 1716614 1716685 2 + 72 tRNA-His-GTG - none -
fig|6666666.229868.rna.27 RNA CM001794.1 1716718 1716791 1 + 74 tRNA-Arg-TCG - none -
fig|6666666.229868.rna.28 RNA CM001794.1 1732133 1732206 2 + 74 tRNA-Arg-CCT - none -
fig|6666666.229868.rna.29 RNA CM001794.1 1737454 1737383 -1 - 72 tRNA-Gly-TCC - none -
fig|6666666.229868.rna.30 RNA CM001794.1 1835765 1835692 -2 - 74 tRNA-Val-GAC tRNAs
fig|6666666.229868.rna.31 RNA CM001794.1 1843766 1843839 2 + 74 tRNA-Pro-GGG tRNAs
fig|6666666.229868.rna.32 RNA CM001794.1 1876751 1876669 -2 - 83 tRNA-Leu-GAG tRNAs
fig|6666666.229868.rna.33 RNA CM001794.1 1882649 1882577 -2 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.229868.rna.34 RNA CM001794.1 1950884 1950813 -2 - 72 tRNA-Gly-GCC tRNAs
fig|6666666.229868.rna.35 RNA CM001794.1 1950996 1950917 -3 - 80 tRNA-Leu-TAG - none -
fig|6666666.229868.rna.36 RNA CM001794.1 1995466 1995538 1 + 73 tRNA-Thr-CGT - none -
fig|6666666.229868.rna.37 RNA CM001794.1 2096988 2096907 -3 - 82 tRNA-Tyr-GTA - none -
fig|6666666.229868.rna.38 RNA CM001794.1 2097069 2096995 -3 - 75 tRNA-Thr-TGT - none -
fig|6666666.229868.rna.39 RNA CM001794.1 2122959 2122888 -3 - 72 tRNA-Glu-TTC - none -
fig|6666666.229868.rna.40 RNA CM001794.1 2282264 2282336 2 + 73 tRNA-Met-CAT - none -
fig|6666666.229868.rna.41 RNA CM001794.1 2303138 2303066 -2 - 73 tRNA-Gln-TTG - none -
fig|6666666.229868.rna.42 RNA CM001794.1 2497395 2494487 -3 - 2909 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229868.rna.43 RNA CM001794.1 2497660 2497587 -1 - 74 tRNA-Ile-GAT - none -
fig|6666666.229868.rna.44 RNA CM001794.1 2499362 2497851 -2 - 1512 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229868.rna.45 RNA CM001794.1 2517317 2517389 2 + 73 tRNA-Met-CAT - none -
fig|6666666.229868.rna.46 RNA CM001794.1 2591311 2591224 -1 - 88 tRNA-SeC(p)-TCA - none -
fig|6666666.229868.rna.47 RNA CM001794.1 2659844 2659916 2 + 73 tRNA-Asn-GTT - none -
fig|6666666.229868.rna.48 RNA CM001794.1 2805024 2804943 -3 - 82 tRNA-Leu-CAG tRNAs