fig|6666666.229903.peg.1 CDS AZTZ01000001.1 155 2470 2 + 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229903.peg.2 CDS AZTZ01000001.1 3978 2521 -3 - 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229903.peg.3 CDS AZTZ01000001.1 4955 3984 -2 - 972 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229903.peg.4 CDS AZTZ01000002.1 103 2220 1 + 2118 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229903.peg.5 CDS AZTZ01000002.1 2663 2319 -2 - 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229903.peg.6 CDS AZTZ01000002.1 3065 2673 -2 - 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229903.peg.7 CDS AZTZ01000002.1 3847 3077 -1 - 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229903.peg.8 CDS AZTZ01000002.1 5660 3852 -2 - 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.229903.peg.9 CDS AZTZ01000003.1 534 67 -3 - 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229903.peg.10 CDS AZTZ01000003.1 1884 547 -3 - 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229903.peg.11 CDS AZTZ01000003.1 2743 1916 -1 - 828 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229903.peg.12 CDS AZTZ01000003.1 3906 2905 -3 - 1002 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229903.peg.13 CDS AZTZ01000004.1 241 390 1 + 150 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.229903.peg.14 CDS AZTZ01000004.1 392 1108 2 + 717 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229903.peg.15 CDS AZTZ01000004.1 2049 1147 -3 - 903 hypothetical protein - none -
fig|6666666.229903.peg.16 CDS AZTZ01000004.1 3954 2095 -3 - 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229903.peg.17 CDS AZTZ01000004.1 5345 3951 -2 - 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229903.peg.18 CDS AZTZ01000004.1 5464 5348 -1 - 117 hypothetical protein - none -
fig|6666666.229903.peg.19 CDS AZTZ01000004.1 5496 7211 3 + 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229903.peg.20 CDS AZTZ01000004.1 7309 7172 -1 - 138 hypothetical protein - none -
fig|6666666.229903.peg.21 CDS AZTZ01000004.1 7278 7607 3 + 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229903.peg.22 CDS AZTZ01000005.1 34 984 1 + 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229903.peg.23 CDS AZTZ01000005.1 1089 2027 3 + 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229903.peg.24 CDS AZTZ01000005.1 2052 2780 3 + 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229903.peg.25 CDS AZTZ01000005.1 3053 3283 2 + 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.26 CDS AZTZ01000005.1 3435 3319 -3 - 117 hypothetical protein - none -
fig|6666666.229903.peg.27 CDS AZTZ01000005.1 3816 4742 3 + 927 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229903.peg.28 CDS AZTZ01000005.1 6103 4865 -1 - 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229903.peg.29 CDS AZTZ01000005.1 6427 7683 1 + 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229903.peg.30 CDS AZTZ01000005.1 7750 8058 1 + 309 Iojap protein - none -
fig|6666666.229903.peg.31 CDS AZTZ01000005.1 8049 8585 3 + 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229903.peg.32 CDS AZTZ01000005.1 8598 10559 3 + 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229903.peg.33 CDS AZTZ01000006.1 3 320 3 + 318 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229903.peg.34 CDS AZTZ01000006.1 1463 420 -2 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229903.peg.35 CDS AZTZ01000006.1 1553 2278 2 + 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229903.peg.36 CDS AZTZ01000006.1 2807 2322 -2 - 486 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229903.peg.37 CDS AZTZ01000006.1 4091 2808 -2 - 1284 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) LOS core oligosaccharide biosynthesis
fig|6666666.229903.peg.38 CDS AZTZ01000006.1 4190 4951 2 + 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229903.peg.39 CDS AZTZ01000006.1 6186 5017 -3 - 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229903.peg.40 CDS AZTZ01000006.1 6394 6203 -1 - 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229903.peg.41 CDS AZTZ01000006.1 6984 6409 -3 - 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229903.peg.42 CDS AZTZ01000006.1 7752 7012 -3 - 741 5-nucleotidase SurE (EC 3.1.3.5) Housecleaning nucleoside triphosphate pyrophosphatases;
Stationary phase repair cluster
fig|6666666.229903.peg.43 CDS AZTZ01000006.1 8795 7785 -2 - 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA processing
fig|6666666.229903.peg.44 CDS AZTZ01000006.1 9271 8792 -1 - 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229903.peg.45 CDS AZTZ01000006.1 9963 9268 -3 - 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229903.peg.46 CDS AZTZ01000006.1 10241 9963 -2 - 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229903.peg.47 CDS AZTZ01000006.1 10393 11067 1 + 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229903.peg.48 CDS AZTZ01000006.1 11071 11745 1 + 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229903.peg.49 CDS AZTZ01000006.1 12022 12672 1 + 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229903.peg.50 CDS AZTZ01000006.1 12681 13613 3 + 933 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229903.peg.51 CDS AZTZ01000006.1 14302 13649 -1 - 654 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229903.peg.52 CDS AZTZ01000006.1 15070 14330 -1 - 741 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229903.peg.53 CDS AZTZ01000007.1 5 367 2 + 363 hypothetical protein - none -
fig|6666666.229903.peg.54 CDS AZTZ01000007.1 929 429 -2 - 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229903.peg.55 CDS AZTZ01000007.1 2388 922 -3 - 1467 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229903.peg.56 CDS AZTZ01000007.1 2942 2505 -2 - 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229903.peg.57 CDS AZTZ01000008.1 1171 32 -1 - 1140 Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229903.peg.58 CDS AZTZ01000008.1 2770 1262 -1 - 1509 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) Inositol catabolism
fig|6666666.229903.peg.59 CDS AZTZ01000010.1 81 665 3 + 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229903.peg.60 CDS AZTZ01000010.1 764 1303 2 + 540 ATPases involved in chromosome partitioning - none -
fig|6666666.229903.peg.61 CDS AZTZ01000010.1 1370 2899 2 + 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229903.peg.62 CDS AZTZ01000010.1 2902 3843 1 + 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229903.peg.63 CDS AZTZ01000010.1 3848 5512 2 + 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229903.peg.64 CDS AZTZ01000010.1 5576 5746 2 + 171 unknown - none -
fig|6666666.229903.peg.65 CDS AZTZ01000010.1 6891 5974 -3 - 918 LysR family regulatory protein CidR - none -
fig|6666666.229903.peg.66 CDS AZTZ01000010.1 7001 7558 2 + 558 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229903.peg.67 CDS AZTZ01000010.1 7819 8121 1 + 303 hypothetical protein - none -
fig|6666666.229903.peg.68 CDS AZTZ01000010.1 8296 9000 1 + 705 hypothetical protein - none -
fig|6666666.229903.peg.69 CDS AZTZ01000012.1 1034 42 -2 - 993 Mobile element protein - none -
fig|6666666.229903.peg.70 CDS AZTZ01000013.1 85 684 1 + 600 unknown - none -
fig|6666666.229903.peg.71 CDS AZTZ01000013.1 688 2610 1 + 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNAmodification position 34
fig|6666666.229903.peg.72 CDS AZTZ01000013.1 2652 2825 3 + 174 hypothetical protein - none -
fig|6666666.229903.peg.73 CDS AZTZ01000013.1 2953 6423 1 + 3471 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229903.peg.74 CDS AZTZ01000014.1 1483 137 -1 - 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229903.peg.75 CDS AZTZ01000014.1 1993 1526 -1 - 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229903.peg.76 CDS AZTZ01000014.1 2010 2162 3 + 153 hypothetical protein - none -
fig|6666666.229903.peg.77 CDS AZTZ01000014.1 2593 2117 -1 - 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229903.peg.78 CDS AZTZ01000014.1 3686 2685 -2 - 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229903.peg.79 CDS AZTZ01000014.1 3996 3667 -3 - 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229903.peg.80 CDS AZTZ01000014.1 4397 3978 -2 - 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229903.peg.81 CDS AZTZ01000014.1 5294 4437 -2 - 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229903.peg.82 CDS AZTZ01000014.1 6108 5407 -3 - 702 Triosephosphate isomerase (EC 5.3.1.1) Glycolysis and Gluconeogenesis
fig|6666666.229903.peg.83 CDS AZTZ01000015.1 36 176 3 + 141 hypothetical protein - none -
fig|6666666.229903.peg.84 CDS AZTZ01000015.1 714 214 -3 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229903.peg.85 CDS AZTZ01000015.1 1820 756 -2 - 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229903.peg.86 CDS AZTZ01000015.1 2235 1813 -3 - 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229903.peg.87 CDS AZTZ01000015.1 5283 2245 -3 - 3039 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229903.peg.88 CDS AZTZ01000016.1 211 666 1 + 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229903.peg.89 CDS AZTZ01000016.1 690 2186 3 + 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229903.peg.90 CDS AZTZ01000016.1 2202 4694 3 + 2493 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229903.peg.91 CDS AZTZ01000017.1 261 4 -3 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229903.peg.92 CDS AZTZ01000017.1 452 261 -2 - 192 LSU ribosomal protein L29p (L35e) - none -
fig|6666666.229903.peg.93 CDS AZTZ01000017.1 862 452 -1 - 411 LSU ribosomal protein L16p (L10e) - none -
fig|6666666.229903.peg.94 CDS AZTZ01000017.1 1583 876 -2 - 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229903.peg.95 CDS AZTZ01000017.1 1932 1600 -3 - 333 LSU ribosomal protein L22p (L17e) - none -
fig|6666666.229903.peg.96 CDS AZTZ01000017.1 2218 1943 -1 - 276 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229903.peg.97 CDS AZTZ01000017.1 3064 2243 -1 - 822 LSU ribosomal protein L2p (L8e) - none -
fig|6666666.229903.peg.98 CDS AZTZ01000017.1 3387 3085 -3 - 303 LSU ribosomal protein L23p (L23Ae) - none -
fig|6666666.229903.peg.99 CDS AZTZ01000017.1 3986 3384 -2 - 603 LSU ribosomal protein L4p (L1e) - none -
fig|6666666.229903.peg.100 CDS AZTZ01000017.1 4628 4002 -2 - 627 LSU ribosomal protein L3p (L3e) - none -
fig|6666666.229903.peg.101 CDS AZTZ01000017.1 4956 4645 -3 - 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229903.peg.102 CDS AZTZ01000017.1 5735 5268 -2 - 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229903.peg.103 CDS AZTZ01000017.1 7222 5825 -1 - 1398 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229903.peg.104 CDS AZTZ01000017.1 8400 7468 -3 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229903.peg.105 CDS AZTZ01000017.1 9144 8410 -3 - 735 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229903.peg.106 CDS AZTZ01000018.1 181 44 -1 - 138 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229903.peg.107 CDS AZTZ01000018.1 405 650 3 + 246 hypothetical protein - none -
fig|6666666.229903.peg.108 CDS AZTZ01000018.1 1505 639 -2 - 867 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229903.peg.109 CDS AZTZ01000018.1 1526 1684 2 + 159 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229903.peg.110 CDS AZTZ01000018.1 1717 2598 1 + 882 Protein rarD - none -
fig|6666666.229903.peg.111 CDS AZTZ01000018.1 3393 2593 -3 - 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229903.peg.112 CDS AZTZ01000018.1 3948 3397 -3 - 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229903.peg.113 CDS AZTZ01000018.1 4501 3953 -1 - 549 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229903.peg.114 CDS AZTZ01000018.1 4646 6259 2 + 1614 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229903.peg.115 CDS AZTZ01000019.1 67 684 1 + 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229903.peg.116 CDS AZTZ01000019.1 690 2105 3 + 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229903.peg.117 CDS AZTZ01000020.1 34 1512 1 + 1479 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229903.peg.118 CDS AZTZ01000020.1 1528 3438 1 + 1911 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229903.peg.119 CDS AZTZ01000020.1 3447 4682 3 + 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229903.peg.120 CDS AZTZ01000021.1 155 286 2 + 132 hypothetical protein - none -
fig|6666666.229903.peg.121 CDS AZTZ01000021.1 293 1036 2 + 744 3-oxoacyl-[ACP] synthase - none -
fig|6666666.229903.peg.122 CDS AZTZ01000021.1 1021 1803 1 + 783 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase - none -
fig|6666666.229903.peg.123 CDS AZTZ01000021.1 1781 2044 2 + 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.124 CDS AZTZ01000021.1 2047 2298 1 + 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.125 CDS AZTZ01000021.1 2298 3965 3 + 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase - none -
fig|6666666.229903.peg.126 CDS AZTZ01000021.1 3991 4536 1 + 546 FIG017861: hypothetical protein - none -
fig|6666666.229903.peg.127 CDS AZTZ01000021.1 4533 5894 3 + 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase - none -
fig|6666666.229903.peg.128 CDS AZTZ01000021.1 5894 6616 2 + 723 FIG143263: Glycosyl transferase - none -
fig|6666666.229903.peg.129 CDS AZTZ01000021.1 6613 7539 1 + 927 Lysophospholipid acyltransferase - none -
fig|6666666.229903.peg.130 CDS AZTZ01000021.1 7536 7982 3 + 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein - none -
fig|6666666.229903.peg.131 CDS AZTZ01000021.1 7979 8563 2 + 585 FIG027190: Putative transmembrane protein - none -
fig|6666666.229903.peg.132 CDS AZTZ01000021.1 8570 10843 2 + 2274 FIG021862: membrane protein, exporter - none -
fig|6666666.229903.peg.133 CDS AZTZ01000021.1 10973 11452 2 + 480 FIG085779: Lipoprotein - none -
fig|6666666.229903.peg.134 CDS AZTZ01000021.1 11461 12684 1 + 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like - none -
fig|6666666.229903.peg.135 CDS AZTZ01000021.1 12677 13120 2 + 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) - none -
fig|6666666.229903.peg.136 CDS AZTZ01000021.1 13170 13898 3 + 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) - none -
fig|6666666.229903.peg.137 CDS AZTZ01000021.1 14020 13907 -1 - 114 hypothetical protein - none -
fig|6666666.229903.peg.138 CDS AZTZ01000022.1 1500 484 -3 - 1017 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229903.peg.139 CDS AZTZ01000022.1 2529 1525 -3 - 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229903.peg.140 CDS AZTZ01000022.1 3574 2543 -1 - 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229903.peg.141 CDS AZTZ01000022.1 5032 3584 -1 - 1449 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229903.peg.142 CDS AZTZ01000023.1 125 1114 2 + 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) - none -
fig|6666666.229903.peg.143 CDS AZTZ01000024.1 339 668 3 + 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229903.peg.144 CDS AZTZ01000024.1 693 1373 3 + 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229903.peg.145 CDS AZTZ01000024.1 1412 1735 2 + 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229903.peg.146 CDS AZTZ01000024.1 1737 2906 3 + 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229903.peg.147 CDS AZTZ01000024.1 3006 3662 3 + 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229903.peg.148 CDS AZTZ01000025.1 48 698 3 + 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229903.peg.149 CDS AZTZ01000025.1 708 1292 3 + 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229903.peg.150 CDS AZTZ01000025.1 1293 2495 3 + 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229903.peg.151 CDS AZTZ01000025.1 2542 3693 1 + 1152 Sugar efflux transporter SotB - none -
fig|6666666.229903.peg.152 CDS AZTZ01000025.1 5304 3763 -3 - 1542 GTP-binding protein EngA CBSS-290633.1.peg.1906;
Universal GTPases
fig|6666666.229903.peg.153 CDS AZTZ01000026.1 1362 139 -3 - 1224 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family - none -
fig|6666666.229903.peg.154 CDS AZTZ01000026.1 2728 1424 -1 - 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229903.peg.155 CDS AZTZ01000026.1 3620 2919 -2 - 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229903.peg.156 CDS AZTZ01000026.1 3641 4339 2 + 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229903.peg.157 CDS AZTZ01000026.1 5893 4400 -1 - 1494 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229903.peg.158 CDS AZTZ01000026.1 6423 6085 -3 - 339 FIG00904093: hypothetical protein - none -
fig|6666666.229903.peg.159 CDS AZTZ01000026.1 6599 7804 2 + 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229903.peg.160 CDS AZTZ01000026.1 7895 9658 2 + 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229903.peg.161 CDS AZTZ01000026.1 9830 10240 2 + 411 probable membrane protein YPO3565 - none -
fig|6666666.229903.peg.162 CDS AZTZ01000027.1 156 2594 3 + 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.163 CDS AZTZ01000027.1 4479 2635 -3 - 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229903.peg.164 CDS AZTZ01000027.1 5401 4568 -1 - 834 transcriptional regulator MtrA - none -
fig|6666666.229903.peg.165 CDS AZTZ01000028.1 109 1380 1 + 1272 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229903.peg.166 CDS AZTZ01000028.1 1563 2612 3 + 1050 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229903.peg.167 CDS AZTZ01000028.1 2981 2862 -2 - 120 Integral membrane protein - none -
fig|6666666.229903.peg.168 CDS AZTZ01000028.1 3135 2992 -3 - 144 hypothetical protein - none -
fig|6666666.229903.peg.169 CDS AZTZ01000028.1 4139 3516 -2 - 624 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229903.peg.170 CDS AZTZ01000028.1 4548 4192 -3 - 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229903.peg.171 CDS AZTZ01000028.1 6809 4578 -2 - 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229903.peg.172 CDS AZTZ01000028.1 8135 6819 -2 - 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229903.peg.173 CDS AZTZ01000028.1 8823 8137 -3 - 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229903.peg.174 CDS AZTZ01000029.1 2374 1499 -1 - 876 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229903.peg.175 CDS AZTZ01000030.1 98 571 2 + 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229903.peg.176 CDS AZTZ01000030.1 626 1840 2 + 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229903.peg.177 CDS AZTZ01000030.1 1900 2283 1 + 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis
fig|6666666.229903.peg.178 CDS AZTZ01000030.1 2426 2749 2 + 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis
fig|6666666.229903.peg.179 CDS AZTZ01000030.1 2761 3282 1 + 522 Chaperone protein HscB Protein chaperones
fig|6666666.229903.peg.180 CDS AZTZ01000030.1 3303 5162 3 + 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones
fig|6666666.229903.peg.181 CDS AZTZ01000030.1 5174 5515 2 + 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229903.peg.182 CDS AZTZ01000030.1 5515 5709 1 + 195 Believed to be involved in assembly of Fe-S clusters - none -
fig|6666666.229903.peg.183 CDS AZTZ01000030.1 7908 5845 -3 - 2064 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229903.peg.184 CDS AZTZ01000030.1 8081 9193 2 + 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229903.peg.185 CDS AZTZ01000030.1 9290 9171 -2 - 120 hypothetical protein - none -
fig|6666666.229903.peg.186 CDS AZTZ01000030.1 10305 9283 -3 - 1023 Beta-hexosaminidase (EC 3.2.1.52) - none -
fig|6666666.229903.peg.187 CDS AZTZ01000031.1 7 1176 1 + 1170 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229903.peg.188 CDS AZTZ01000031.1 1200 2282 3 + 1083 Alanine racemase, biosynthetic (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229903.peg.189 CDS AZTZ01000031.1 2298 3947 3 + 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229903.peg.190 CDS AZTZ01000032.1 538 407 -1 - 132 hypothetical protein - none -
fig|6666666.229903.peg.191 CDS AZTZ01000032.1 854 546 -2 - 309 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229903.peg.192 CDS AZTZ01000032.1 1352 861 -2 - 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229903.peg.193 CDS AZTZ01000032.1 2013 1342 -3 - 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229903.peg.194 CDS AZTZ01000032.1 3154 2015 -1 - 1140 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229903.peg.195 CDS AZTZ01000032.1 4466 3141 -2 - 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229903.peg.196 CDS AZTZ01000032.1 5899 4469 -1 - 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229903.peg.197 CDS AZTZ01000032.1 6559 6038 -1 - 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229903.peg.198 CDS AZTZ01000032.1 8509 6602 -1 - 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229903.peg.199 CDS AZTZ01000033.1 129 674 3 + 546 Hydrogenase-4 component A - none -
fig|6666666.229903.peg.200 CDS AZTZ01000033.1 708 2729 3 + 2022 Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 Formate hydrogenase
fig|6666666.229903.peg.201 CDS AZTZ01000033.1 2737 3702 1 + 966 Hydrogenase-4 component C - none -
fig|6666666.229903.peg.202 CDS AZTZ01000033.1 3715 5160 1 + 1446 Hydrogenase-4 component D - none -
fig|6666666.229903.peg.203 CDS AZTZ01000033.1 5227 5808 1 + 582 Hydrogenase-4 component E - none -
fig|6666666.229903.peg.204 CDS AZTZ01000033.1 5813 7351 2 + 1539 Hydrogenase-4 component F - none -
fig|6666666.229903.peg.205 CDS AZTZ01000033.1 7372 9102 1 + 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229903.peg.206 CDS AZTZ01000033.1 9116 9763 2 + 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229903.peg.207 CDS AZTZ01000033.1 9760 10536 1 + 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229903.peg.208 CDS AZTZ01000034.1 533 96 -2 - 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229903.peg.209 CDS AZTZ01000034.1 1394 543 -2 - 852 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229903.peg.210 CDS AZTZ01000035.1 3 3101 3 + 3099 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229903.peg.211 CDS AZTZ01000035.1 3103 4035 1 + 933 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229903.peg.212 CDS AZTZ01000035.1 4028 4741 2 + 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229903.peg.213 CDS AZTZ01000035.1 5069 4938 -2 - 132 hypothetical protein - none -
fig|6666666.229903.peg.214 CDS AZTZ01000035.1 7649 5364 -2 - 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229903.peg.215 CDS AZTZ01000036.1 70 2268 1 + 2199 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229903.peg.216 CDS AZTZ01000036.1 2378 3211 2 + 834 Cell division protein - none -
fig|6666666.229903.peg.217 CDS AZTZ01000037.1 118 456 1 + 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229903.peg.218 CDS AZTZ01000037.1 595 1638 1 + 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594
fig|6666666.229903.peg.219 CDS AZTZ01000037.1 1640 2272 2 + 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229903.peg.220 CDS AZTZ01000037.1 2269 3252 1 + 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229903.peg.221 CDS AZTZ01000037.1 3256 4038 1 + 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229903.peg.222 CDS AZTZ01000037.1 4070 4594 2 + 525 FIG00696143: hypothetical protein - none -
fig|6666666.229903.peg.223 CDS AZTZ01000037.1 4731 4591 -3 - 141 hypothetical protein - none -
fig|6666666.229903.peg.224 CDS AZTZ01000037.1 4685 5995 2 + 1311 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229903.peg.225 CDS AZTZ01000037.1 6042 6155 3 + 114 hypothetical protein - none -
fig|6666666.229903.peg.226 CDS AZTZ01000037.1 6601 6116 -1 - 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229903.peg.227 CDS AZTZ01000037.1 7105 6641 -1 - 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229903.peg.228 CDS AZTZ01000037.1 7892 7107 -2 - 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229903.peg.229 CDS AZTZ01000037.1 8044 9150 1 + 1107 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229903.peg.230 CDS AZTZ01000037.1 9845 9213 -2 - 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229903.peg.231 CDS AZTZ01000037.1 10740 9871 -3 - 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.232 CDS AZTZ01000037.1 10984 11637 1 + 654 Putative lipase in cluster with Phosphatidate cytidylyltransferase CBSS-316407.3.peg.1371;
Triacylglycerol metabolism
fig|6666666.229903.peg.233 CDS AZTZ01000037.1 11641 12723 1 + 1083 Putative lipase in cluster with Phosphatidate cytidylyltransferase CBSS-316407.3.peg.1371;
Triacylglycerol metabolism
fig|6666666.229903.peg.234 CDS AZTZ01000037.1 12725 14041 2 + 1317 Ser/Thr and Tyr protein phosphatase (dual specificity) CBSS-316407.3.peg.1371
fig|6666666.229903.peg.235 CDS AZTZ01000037.1 14128 14493 1 + 366 hypothetical protein - none -
fig|6666666.229903.peg.236 CDS AZTZ01000038.1 194 15 -2 - 180 hypothetical protein - none -
fig|6666666.229903.peg.237 CDS AZTZ01000038.1 181 1446 1 + 1266 Chromosome partition protein MukF MukBEF Chromosome Condensation
fig|6666666.229903.peg.238 CDS AZTZ01000039.1 201 1850 3 + 1650 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229903.peg.239 CDS AZTZ01000039.1 1855 2349 1 + 495 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229903.peg.240 CDS AZTZ01000039.1 3444 2404 -3 - 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229903.peg.241 CDS AZTZ01000039.1 5461 3428 -1 - 2034 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229903.peg.242 CDS AZTZ01000039.1 6489 5461 -3 - 1029 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229903.peg.243 CDS AZTZ01000039.1 6687 6517 -3 - 171 hypothetical protein - none -
fig|6666666.229903.peg.244 CDS AZTZ01000040.1 1946 96 -2 - 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229903.peg.245 CDS AZTZ01000040.1 3779 2022 -2 - 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229903.peg.246 CDS AZTZ01000040.1 4116 3901 -3 - 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229903.peg.247 CDS AZTZ01000040.1 4151 4318 2 + 168 hypothetical protein - none -
fig|6666666.229903.peg.248 CDS AZTZ01000040.1 4342 5370 1 + 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ;
YrdC-YciO-Sua5 protein family
fig|6666666.229903.peg.249 CDS AZTZ01000040.1 5435 5668 2 + 234 unknown - none -
fig|6666666.229903.peg.250 CDS AZTZ01000040.1 5671 6249 1 + 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229903.peg.251 CDS AZTZ01000040.1 8333 6318 -2 - 2016 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229903.peg.252 CDS AZTZ01000040.1 9478 8438 -1 - 1041 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229903.peg.253 CDS AZTZ01000041.1 158 1987 2 + 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229903.peg.254 CDS AZTZ01000042.1 1205 318 -2 - 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229903.peg.255 CDS AZTZ01000042.1 2458 1205 -1 - 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229903.peg.256 CDS AZTZ01000042.1 3273 2554 -3 - 720 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229903.peg.257 CDS AZTZ01000042.1 4605 3331 -3 - 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229903.peg.258 CDS AZTZ01000042.1 5100 4717 -3 - 384 hypothetical protein - none -
fig|6666666.229903.peg.259 CDS AZTZ01000042.1 6072 5128 -3 - 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229903.peg.260 CDS AZTZ01000042.1 8531 6084 -2 - 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229903.peg.261 CDS AZTZ01000042.1 8751 8620 -3 - 132 hypothetical protein - none -
fig|6666666.229903.peg.262 CDS AZTZ01000043.1 146 1243 2 + 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229903.peg.263 CDS AZTZ01000043.1 1367 2263 2 + 897 Cytidine deaminase (EC 3.5.4.5) pyrimidine conversions
fig|6666666.229903.peg.264 CDS AZTZ01000043.1 3658 2342 -1 - 1317 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229903.peg.265 CDS AZTZ01000044.1 2566 68 -1 - 2499 CRISPR-associated protein Cas3@1@1 CRISPRs
fig|6666666.229903.peg.266 CDS AZTZ01000044.1 2989 5922 1 + 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation
fig|6666666.229903.peg.267 CDS AZTZ01000045.1 67 537 1 + 471 5-deoxy-glucuronate isomerase (EC 5.3.1.-) Inositol catabolism
fig|6666666.229903.peg.268 CDS AZTZ01000046.1 936 163 -3 - 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229903.peg.269 CDS AZTZ01000046.1 1540 1013 -1 - 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229903.peg.270 CDS AZTZ01000046.1 1703 2947 2 + 1245 Tryptophan-specific transport protein - none -
fig|6666666.229903.peg.271 CDS AZTZ01000046.1 3250 3483 1 + 234 hypothetical protein - none -
fig|6666666.229903.peg.272 CDS AZTZ01000046.1 4679 3972 -2 - 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229903.peg.273 CDS AZTZ01000046.1 4894 5421 1 + 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229903.peg.274 CDS AZTZ01000047.1 93 872 3 + 780 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229903.peg.275 CDS AZTZ01000047.1 2008 917 -1 - 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNAmodification position 34
fig|6666666.229903.peg.276 CDS AZTZ01000047.1 2637 2182 -3 - 456 hypothetical protein - none -
fig|6666666.229903.peg.277 CDS AZTZ01000047.1 3181 2753 -1 - 429 ABC-type Fe3+-hydroxamate transport system, periplasmic component - none -
fig|6666666.229903.peg.278 CDS AZTZ01000048.1 57 854 3 + 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229903.peg.279 CDS AZTZ01000048.1 909 2741 3 + 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229903.peg.280 CDS AZTZ01000048.1 3959 2895 -2 - 1065 FIG01220323: hypothetical protein - none -
fig|6666666.229903.peg.281 CDS AZTZ01000048.1 4063 4953 1 + 891 Transcriptional regulator, LysR family - none -
fig|6666666.229903.peg.282 CDS AZTZ01000048.1 6203 5094 -2 - 1110 Putative exported protein precursor - none -
fig|6666666.229903.peg.283 CDS AZTZ01000048.1 8192 6534 -2 - 1659 Carboxylesterase type B - none -
fig|6666666.229903.peg.284 CDS AZTZ01000049.1 3127 245 -1 - 2883 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229903.peg.285 CDS AZTZ01000049.1 3600 4559 3 + 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229903.peg.286 CDS AZTZ01000049.1 4960 4745 -1 - 216 Thioredoxin - none -
fig|6666666.229903.peg.287 CDS AZTZ01000049.1 6181 5168 -1 - 1014 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229903.peg.288 CDS AZTZ01000049.1 7062 6187 -3 - 876 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229903.peg.289 CDS AZTZ01000050.1 523 182 -1 - 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229903.peg.290 CDS AZTZ01000050.1 1322 555 -2 - 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation
fig|6666666.229903.peg.291 CDS AZTZ01000050.1 1487 2677 2 + 1191 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229903.peg.292 CDS AZTZ01000050.1 2655 2933 3 + 279 FIG001341: Probable Fe(2+)-trafficking protein YggX - none -
fig|6666666.229903.peg.293 CDS AZTZ01000050.1 2930 4012 2 + 1083 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229903.peg.294 CDS AZTZ01000050.1 5149 4556 -1 - 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229903.peg.295 CDS AZTZ01000050.1 5253 5564 3 + 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229903.peg.296 CDS AZTZ01000051.1 215 799 2 + 585 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229903.peg.297 CDS AZTZ01000051.1 952 2583 1 + 1632 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229903.peg.298 CDS AZTZ01000051.1 4579 3275 -1 - 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229903.peg.299 CDS AZTZ01000051.1 6386 4590 -2 - 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229903.peg.300 CDS AZTZ01000051.1 6667 6401 -1 - 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229903.peg.301 CDS AZTZ01000051.1 6820 6701 -1 - 120 hypothetical protein - none -
fig|6666666.229903.peg.302 CDS AZTZ01000052.1 1637 108 -2 - 1530 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.303 CDS AZTZ01000053.1 83 385 2 + 303 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229903.peg.304 CDS AZTZ01000053.1 400 1284 1 + 885 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229903.peg.305 CDS AZTZ01000053.1 1294 2163 1 + 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229903.peg.306 CDS AZTZ01000053.1 2173 3051 1 + 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229903.peg.307 CDS AZTZ01000053.1 3158 3961 2 + 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Sialic Acid Metabolism
fig|6666666.229903.peg.308 CDS AZTZ01000054.1 282 1634 3 + 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229903.peg.309 CDS AZTZ01000054.1 1664 1849 2 + 186 hypothetical protein - none -
fig|6666666.229903.peg.310 CDS AZTZ01000054.1 1889 2161 2 + 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229903.peg.311 CDS AZTZ01000055.1 1550 123 -2 - 1428 hypothetical protein - none -
fig|6666666.229903.peg.312 CDS AZTZ01000055.1 2400 1642 -3 - 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229903.peg.313 CDS AZTZ01000055.1 3499 2402 -1 - 1098 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) - none -
fig|6666666.229903.peg.314 CDS AZTZ01000055.1 3898 3569 -1 - 330 Protein yifE - none -
fig|6666666.229903.peg.315 CDS AZTZ01000055.1 4485 3958 -3 - 528 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229903.peg.316 CDS AZTZ01000056.1 766 1314 1 + 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229903.peg.317 CDS AZTZ01000057.1 1422 46 -3 - 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229903.peg.318 CDS AZTZ01000057.1 2801 1446 -2 - 1356 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.229903.peg.319 CDS AZTZ01000057.1 3772 2801 -1 - 972 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229903.peg.320 CDS AZTZ01000057.1 4336 3824 -1 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229903.peg.321 CDS AZTZ01000058.1 742 855 1 + 114 hypothetical protein - none -
fig|6666666.229903.peg.322 CDS AZTZ01000058.1 1954 830 -1 - 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229903.peg.323 CDS AZTZ01000058.1 2406 1954 -3 - 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229903.peg.324 CDS AZTZ01000058.1 2366 2542 2 + 177 hypothetical protein - none -
fig|6666666.229903.peg.325 CDS AZTZ01000058.1 3585 2524 -3 - 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229903.peg.326 CDS AZTZ01000058.1 4363 3605 -1 - 759 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229903.peg.327 CDS AZTZ01000059.1 2233 131 -1 - 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Universal GTPases
fig|6666666.229903.peg.328 CDS AZTZ01000060.1 71 2893 2 + 2823 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229903.peg.329 CDS AZTZ01000061.1 67 810 1 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.330 CDS AZTZ01000061.1 818 2230 2 + 1413 Putative cell division protein precursor - none -
fig|6666666.229903.peg.331 CDS AZTZ01000061.1 3166 2303 -1 - 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229903.peg.332 CDS AZTZ01000061.1 4048 3308 -1 - 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229903.peg.333 CDS AZTZ01000061.1 4397 4110 -2 - 288 hypothetical protein - none -
fig|6666666.229903.peg.334 CDS AZTZ01000061.1 6803 4491 -2 - 2313 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.229903.peg.335 CDS AZTZ01000061.1 7726 6905 -1 - 822 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229903.peg.336 CDS AZTZ01000063.1 15 1193 3 + 1179 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229903.peg.337 CDS AZTZ01000064.1 48 1496 3 + 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229903.peg.338 CDS AZTZ01000065.1 2965 206 -1 - 2760 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229903.peg.339 CDS AZTZ01000066.1 580 146 -1 - 435 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229903.peg.340 CDS AZTZ01000066.1 1407 577 -3 - 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229903.peg.341 CDS AZTZ01000066.1 1880 1404 -2 - 477 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229903.peg.342 CDS AZTZ01000066.1 2545 1883 -1 - 663 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229903.peg.343 CDS AZTZ01000066.1 2677 4176 1 + 1500 ATPase component BioM of energizing module of biotin ECF transporter ECF class transporters
fig|6666666.229903.peg.344 CDS AZTZ01000067.1 883 128 -1 - 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229903.peg.345 CDS AZTZ01000067.1 1820 945 -2 - 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229903.peg.346 CDS AZTZ01000067.1 1863 2177 3 + 315 Uncharacterized protein PM1437 - none -
fig|6666666.229903.peg.347 CDS AZTZ01000067.1 2514 2188 -3 - 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229903.peg.348 CDS AZTZ01000067.1 3075 2527 -3 - 549 FIG00903983: hypothetical protein - none -
fig|6666666.229903.peg.349 CDS AZTZ01000068.1 1931 285 -2 - 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229903.peg.350 CDS AZTZ01000069.1 2675 282 -2 - 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229903.peg.351 CDS AZTZ01000069.1 2976 2704 -3 - 273 putative cytoplasmic protein - none -
fig|6666666.229903.peg.352 CDS AZTZ01000069.1 3319 2978 -1 - 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229903.peg.353 CDS AZTZ01000069.1 3453 4253 3 + 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229903.peg.354 CDS AZTZ01000069.1 4319 6910 2 + 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229903.peg.355 CDS AZTZ01000069.1 8267 6984 -2 - 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229903.peg.356 CDS AZTZ01000070.1 1325 465 -2 - 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229903.peg.357 CDS AZTZ01000070.1 2427 1309 -3 - 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229903.peg.358 CDS AZTZ01000070.1 2691 3935 3 + 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229903.peg.359 CDS AZTZ01000070.1 6668 4011 -2 - 2658 Paraquat-inducible protein B Oxidative stress
fig|6666666.229903.peg.360 CDS AZTZ01000070.1 7914 6631 -3 - 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229903.peg.361 CDS AZTZ01000071.1 233 1666 2 + 1434 Long-chain fatty acid transport protein - none -
fig|6666666.229903.peg.362 CDS AZTZ01000071.1 1742 2281 2 + 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229903.peg.363 CDS AZTZ01000071.1 2278 2946 1 + 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229903.peg.364 CDS AZTZ01000071.1 3011 3736 2 + 726 Integral membrane protein TerC - none -
fig|6666666.229903.peg.365 CDS AZTZ01000071.1 5254 3845 -1 - 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229903.peg.366 CDS AZTZ01000072.1 873 160 -3 - 714 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229903.peg.367 CDS AZTZ01000072.1 1047 883 -3 - 165 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229903.peg.368 CDS AZTZ01000072.1 2429 1146 -2 - 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229903.peg.369 CDS AZTZ01000072.1 3609 2506 -3 - 1104 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229903.peg.370 CDS AZTZ01000073.1 84 2741 3 + 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229903.peg.371 CDS AZTZ01000073.1 2830 4419 1 + 1590 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229903.peg.372 CDS AZTZ01000073.1 4456 5937 1 + 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229903.peg.373 CDS AZTZ01000073.1 6843 6289 -3 - 555 FIG002003: Protein YdjA - none -
fig|6666666.229903.peg.374 CDS AZTZ01000073.1 6967 8850 1 + 1884 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229903.peg.375 CDS AZTZ01000073.1 8893 10017 1 + 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229903.peg.376 CDS AZTZ01000073.1 10094 10717 2 + 624 Hypothetical YciO protein, TsaC/YrdC paralog YrdC-YciO-Sua5 protein family
fig|6666666.229903.peg.377 CDS AZTZ01000073.1 10772 11740 2 + 969 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229903.peg.378 CDS AZTZ01000073.1 11771 12742 2 + 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229903.peg.379 CDS AZTZ01000074.1 102 386 3 + 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229903.peg.380 CDS AZTZ01000074.1 422 2908 2 + 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229903.peg.381 CDS AZTZ01000074.1 2878 3015 1 + 138 hypothetical protein - none -
fig|6666666.229903.peg.382 CDS AZTZ01000074.1 2981 3796 2 + 816 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229903.peg.383 CDS AZTZ01000074.1 3796 4677 1 + 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229903.peg.384 CDS AZTZ01000074.1 4715 5164 2 + 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229903.peg.385 CDS AZTZ01000074.1 5178 5813 3 + 636 Cytochrome c-type protein NapC - none -
fig|6666666.229903.peg.386 CDS AZTZ01000074.1 7794 5899 -3 - 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229903.peg.387 CDS AZTZ01000074.1 8955 7912 -3 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229903.peg.388 CDS AZTZ01000074.1 10102 8975 -1 - 1128 Fic family protein - none -
fig|6666666.229903.peg.389 CDS AZTZ01000074.1 11136 10273 -3 - 864 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229903.peg.390 CDS AZTZ01000075.1 93 941 3 + 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550
fig|6666666.229903.peg.391 CDS AZTZ01000076.1 45 650 3 + 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229903.peg.392 CDS AZTZ01000076.1 604 753 1 + 150 hypothetical protein - none -
fig|6666666.229903.peg.393 CDS AZTZ01000076.1 3233 768 -2 - 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229903.peg.394 CDS AZTZ01000077.1 959 147 -2 - 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229903.peg.395 CDS AZTZ01000077.1 985 1788 1 + 804 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.229903.peg.396 CDS AZTZ01000077.1 1899 2483 3 + 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229903.peg.397 CDS AZTZ01000078.1 767 69 -2 - 699 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis
fig|6666666.229903.peg.398 CDS AZTZ01000078.1 952 785 -1 - 168 hypothetical protein - none -
fig|6666666.229903.peg.399 CDS AZTZ01000078.1 1103 1567 2 + 465 FIG00710847: hypothetical protein - none -
fig|6666666.229903.peg.400 CDS AZTZ01000078.1 1603 2367 1 + 765 FIG00711691: hypothetical protein - none -
fig|6666666.229903.peg.401 CDS AZTZ01000078.1 3654 2830 -3 - 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229903.peg.402 CDS AZTZ01000078.1 4328 3705 -2 - 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229903.peg.403 CDS AZTZ01000078.1 5254 4574 -1 - 681 FIG009095: D,D-carboxypeptidase family protein CBSS-584.1.peg.1352
fig|6666666.229903.peg.404 CDS AZTZ01000078.1 6389 5256 -2 - 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229903.peg.405 CDS AZTZ01000078.1 6761 6417 -2 - 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352
fig|6666666.229903.peg.406 CDS AZTZ01000078.1 8709 6829 -3 - 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229903.peg.407 CDS AZTZ01000079.1 601 119 -1 - 483 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229903.peg.408 CDS AZTZ01000080.1 38 1123 2 + 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229903.peg.409 CDS AZTZ01000080.1 1150 2454 1 + 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229903.peg.410 CDS AZTZ01000080.1 2469 3659 3 + 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229903.peg.411 CDS AZTZ01000080.1 3700 4764 1 + 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229903.peg.412 CDS AZTZ01000080.1 4835 6265 2 + 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229903.peg.413 CDS AZTZ01000080.1 6278 7207 2 + 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229903.peg.414 CDS AZTZ01000081.1 24 401 3 + 378 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229903.peg.415 CDS AZTZ01000081.1 414 2609 3 + 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229903.peg.416 CDS AZTZ01000081.1 2606 4615 2 + 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229903.peg.417 CDS AZTZ01000081.1 4642 4800 1 + 159 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229903.peg.418 CDS AZTZ01000081.1 4754 5953 2 + 1200 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229903.peg.419 CDS AZTZ01000081.1 6160 7599 1 + 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229903.peg.420 CDS AZTZ01000082.1 3805 329 -1 - 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229903.peg.421 CDS AZTZ01000082.1 3770 3940 2 + 171 hypothetical protein - none -
fig|6666666.229903.peg.422 CDS AZTZ01000083.1 69 614 3 + 546 FIG00696317: hypothetical protein - none -
fig|6666666.229903.peg.423 CDS AZTZ01000083.1 1298 636 -2 - 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229903.peg.424 CDS AZTZ01000083.1 1421 1633 2 + 213 Protein YcgL - none -
fig|6666666.229903.peg.425 CDS AZTZ01000083.1 2535 2026 -3 - 510 probable lipoprotein NlpC - none -
fig|6666666.229903.peg.426 CDS AZTZ01000083.1 3558 2704 -3 - 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation
fig|6666666.229903.peg.427 CDS AZTZ01000083.1 4467 3568 -3 - 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229903.peg.428 CDS AZTZ01000083.1 5593 4511 -1 - 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229903.peg.429 CDS AZTZ01000083.1 6187 5732 -1 - 456 Outer membrane lipoprotein - none -
fig|6666666.229903.peg.430 CDS AZTZ01000083.1 6792 6229 -3 - 564 Protein yecM - none -
fig|6666666.229903.peg.431 CDS AZTZ01000084.1 426 836 3 + 411 transposase - none -
fig|6666666.229903.peg.432 CDS AZTZ01000084.1 2246 900 -2 - 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229903.peg.433 CDS AZTZ01000084.1 3165 2269 -3 - 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229903.peg.434 CDS AZTZ01000084.1 3390 3635 3 + 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229903.peg.435 CDS AZTZ01000084.1 3646 4536 1 + 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229903.peg.436 CDS AZTZ01000085.1 1123 80 -1 - 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229903.peg.437 CDS AZTZ01000086.1 1336 59 -1 - 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.229903.peg.438 CDS AZTZ01000086.1 2461 1358 -1 - 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229903.peg.439 CDS AZTZ01000086.1 3522 2473 -3 - 1050 FIG021952: putative membrane protein - none -
fig|6666666.229903.peg.440 CDS AZTZ01000086.1 4216 3665 -1 - 552 Type IV pilus biogenesis protein PilF - none -
fig|6666666.229903.peg.441 CDS AZTZ01000086.1 5378 4239 -2 - 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229903.peg.442 CDS AZTZ01000086.1 5621 5499 -2 - 123 hypothetical protein - none -
fig|6666666.229903.peg.443 CDS AZTZ01000086.1 5672 6721 2 + 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229903.peg.444 CDS AZTZ01000086.1 8186 6822 -2 - 1365 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229903.peg.445 CDS AZTZ01000086.1 9520 8279 -1 - 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229903.peg.446 CDS AZTZ01000087.1 1458 1586 3 + 129 hypothetical protein - none -
fig|6666666.229903.peg.447 CDS AZTZ01000087.1 2527 1553 -1 - 975 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229903.peg.448 CDS AZTZ01000088.1 13 2148 1 + 2136 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229903.peg.449 CDS AZTZ01000088.1 2227 3129 1 + 903 Lipoprotein nlpI precursor - none -
fig|6666666.229903.peg.450 CDS AZTZ01000088.1 3265 5043 1 + 1779 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229903.peg.451 CDS AZTZ01000088.1 5661 5122 -3 - 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229903.peg.452 CDS AZTZ01000089.1 16 468 1 + 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229903.peg.453 CDS AZTZ01000089.1 501 1259 3 + 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229903.peg.454 CDS AZTZ01000089.1 2403 1396 -3 - 1008 Putative permease PerM (= YfgO) - none -
fig|6666666.229903.peg.455 CDS AZTZ01000090.1 144 584 3 + 441 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229903.peg.456 CDS AZTZ01000090.1 828 592 -3 - 237 YcfP protein: probably an esterase that is part of a salvage cluster - none -
fig|6666666.229903.peg.457 CDS AZTZ01000090.1 1714 899 -1 - 816 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229903.peg.458 CDS AZTZ01000090.1 2539 1805 -1 - 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229903.peg.459 CDS AZTZ01000090.1 2667 2930 3 + 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229903.peg.460 CDS AZTZ01000090.1 3204 3079 -3 - 126 hypothetical protein - none -
fig|6666666.229903.peg.461 CDS AZTZ01000090.1 3597 4811 3 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229903.peg.462 CDS AZTZ01000090.1 5589 4894 -3 - 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229903.peg.463 CDS AZTZ01000090.1 6443 5583 -2 - 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229903.peg.464 CDS AZTZ01000090.1 7231 6482 -1 - 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229903.peg.465 CDS AZTZ01000090.1 8414 7323 -2 - 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229903.peg.466 CDS AZTZ01000091.1 65 700 2 + 636 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229903.peg.467 CDS AZTZ01000091.1 749 1747 2 + 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229903.peg.468 CDS AZTZ01000091.1 1698 1820 3 + 123 hypothetical protein - none -
fig|6666666.229903.peg.469 CDS AZTZ01000091.1 2335 1817 -1 - 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229903.peg.470 CDS AZTZ01000092.1 414 683 3 + 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229903.peg.471 CDS AZTZ01000092.1 707 2062 2 + 1356 FIG00732228: membrane protein - none -
fig|6666666.229903.peg.472 CDS AZTZ01000092.1 2073 2897 3 + 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229903.peg.473 CDS AZTZ01000092.1 2887 3831 1 + 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229903.peg.474 CDS AZTZ01000092.1 4950 4000 -3 - 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p YrdC-YciO-Sua5 protein family
fig|6666666.229903.peg.475 CDS AZTZ01000092.1 5013 5519 3 + 507 FIG001674: hypothetical protein - none -
fig|6666666.229903.peg.476 CDS AZTZ01000092.1 7657 5516 -1 - 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229903.peg.477 CDS AZTZ01000092.1 8139 7666 -3 - 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229903.peg.478 CDS AZTZ01000092.1 8597 8139 -2 - 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229903.peg.479 CDS AZTZ01000092.1 9163 8660 -1 - 504 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229903.peg.480 CDS AZTZ01000093.1 2423 1872 -2 - 552 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.481 CDS AZTZ01000093.1 3043 2462 -1 - 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.482 CDS AZTZ01000093.1 4120 3233 -1 - 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229903.peg.483 CDS AZTZ01000093.1 4611 4144 -3 - 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229903.peg.484 CDS AZTZ01000094.1 51 1214 3 + 1164 Na+/H+ antiporter NhaA type NhaA, NhaD and Sodium-dependent phosphate transporters
fig|6666666.229903.peg.485 CDS AZTZ01000096.1 102 1142 3 + 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229903.peg.486 CDS AZTZ01000096.1 1244 1384 2 + 141 hypothetical protein - none -
fig|6666666.229903.peg.487 CDS AZTZ01000096.1 1356 1553 3 + 198 LemA family protein - none -
fig|6666666.229903.peg.488 CDS AZTZ01000096.1 1930 2259 1 + 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229903.peg.489 CDS AZTZ01000096.1 2384 2836 2 + 453 putative membrane protein - none -
fig|6666666.229903.peg.490 CDS AZTZ01000096.1 2837 3226 2 + 390 COG2363 - none -
fig|6666666.229903.peg.491 CDS AZTZ01000096.1 3223 7335 1 + 4113 HrpA-like helicases - none -
fig|6666666.229903.peg.492 CDS AZTZ01000097.1 51 437 3 + 387 Type IV pilin PilA Type IV pilus
fig|6666666.229903.peg.493 CDS AZTZ01000097.1 464 1873 2 + 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229903.peg.494 CDS AZTZ01000097.1 1866 3089 3 + 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229903.peg.495 CDS AZTZ01000097.1 3089 3775 2 + 687 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229903.peg.496 CDS AZTZ01000097.1 3825 4448 3 + 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229903.peg.497 CDS AZTZ01000097.1 4438 4650 1 + 213 FIG003276: zinc-binding protein - none -
fig|6666666.229903.peg.498 CDS AZTZ01000097.1 4650 4922 3 + 273 FIG00904058: hypothetical protein - none -
fig|6666666.229903.peg.499 CDS AZTZ01000097.1 5318 6691 2 + 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229903.peg.500 CDS AZTZ01000098.1 88 852 1 + 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229903.peg.501 CDS AZTZ01000098.1 931 1659 1 + 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229903.peg.502 CDS AZTZ01000098.1 1646 2707 2 + 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229903.peg.503 CDS AZTZ01000098.1 3958 2852 -1 - 1107 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229903.peg.504 CDS AZTZ01000099.1 1037 537 -2 - 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229903.peg.505 CDS AZTZ01000099.1 1406 1053 -2 - 354 LSU ribosomal protein L18p (L5e) - none -
fig|6666666.229903.peg.506 CDS AZTZ01000099.1 1557 1420 -3 - 138 LSU ribosomal protein L6p (L9e) - none -
fig|6666666.229903.peg.507 CDS AZTZ01000099.1 2361 1969 -3 - 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229903.peg.508 CDS AZTZ01000099.1 2703 2398 -3 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229903.peg.509 CDS AZTZ01000099.1 3144 2716 -3 - 429 LSU ribosomal protein L5p (L11e) - none -
fig|6666666.229903.peg.510 CDS AZTZ01000100.1 1238 312 -2 - 927 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229903.peg.511 CDS AZTZ01000100.1 2881 1316 -1 - 1566 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229903.peg.512 CDS AZTZ01000100.1 3162 3425 3 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229903.peg.513 CDS AZTZ01000100.1 4212 3535 -3 - 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229903.peg.514 CDS AZTZ01000100.1 4288 5232 1 + 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229903.peg.515 CDS AZTZ01000100.1 5243 5734 2 + 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229903.peg.516 CDS AZTZ01000100.1 6623 5811 -2 - 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229903.peg.517 CDS AZTZ01000100.1 7770 6751 -3 - 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229903.peg.518 CDS AZTZ01000101.1 19 1023 1 + 1005 ABC transporter, solute-binding protein - none -
fig|6666666.229903.peg.519 CDS AZTZ01000101.1 1023 1238 3 + 216 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229903.peg.520 CDS AZTZ01000101.1 1244 2035 2 + 792 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229903.peg.521 CDS AZTZ01000101.1 2032 2781 1 + 750 ABC transporter ATP-binding protein - none -
fig|6666666.229903.peg.522 CDS AZTZ01000102.1 37 1155 1 + 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229903.peg.523 CDS AZTZ01000102.1 1160 2227 2 + 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229903.peg.524 CDS AZTZ01000102.1 2402 3286 2 + 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.229903.peg.525 CDS AZTZ01000102.1 3437 4039 2 + 603 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229903.peg.526 CDS AZTZ01000102.1 4036 4248 1 + 213 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229903.peg.527 CDS AZTZ01000102.1 5590 4577 -1 - 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229903.peg.528 CDS AZTZ01000102.1 6702 5590 -3 - 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229903.peg.529 CDS AZTZ01000102.1 7541 6729 -2 - 813 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229903.peg.530 CDS AZTZ01000102.1 8244 7621 -3 - 624 ATPase component NikO of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229903.peg.531 CDS AZTZ01000102.1 8906 8241 -2 - 666 Transmembrane component NikQ of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229903.peg.532 CDS AZTZ01000102.1 9556 8912 -1 - 645 Substrate-specific component NikM of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229903.peg.533 CDS AZTZ01000102.1 10059 9556 -3 - 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229903.peg.534 CDS AZTZ01000102.1 10737 10066 -3 - 672 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229903.peg.535 CDS AZTZ01000103.1 119 253 2 + 135 hypothetical protein - none -
fig|6666666.229903.peg.536 CDS AZTZ01000103.1 278 919 2 + 642 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229903.peg.537 CDS AZTZ01000103.1 912 1151 3 + 240 hypothetical protein - none -
fig|6666666.229903.peg.538 CDS AZTZ01000104.1 1199 828 -2 - 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster
fig|6666666.229903.peg.539 CDS AZTZ01000104.1 1742 1251 -2 - 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster
fig|6666666.229903.peg.540 CDS AZTZ01000104.1 2787 2098 -3 - 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster
fig|6666666.229903.peg.541 CDS AZTZ01000104.1 3220 2792 -1 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster
fig|6666666.229903.peg.542 CDS AZTZ01000104.1 3928 3377 -1 - 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229903.peg.543 CDS AZTZ01000104.1 4340 3930 -2 - 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229903.peg.544 CDS AZTZ01000105.1 1606 542 -1 - 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229903.peg.545 CDS AZTZ01000105.1 2404 1619 -1 - 786 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229903.peg.546 CDS AZTZ01000106.1 11 1165 2 + 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229903.peg.547 CDS AZTZ01000106.1 1169 2542 2 + 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229903.peg.548 CDS AZTZ01000106.1 3381 3860 3 + 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229903.peg.549 CDS AZTZ01000106.1 3864 6560 3 + 2697 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229903.peg.550 CDS AZTZ01000106.1 6659 7276 2 + 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229903.peg.551 CDS AZTZ01000106.1 7289 8629 2 + 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229903.peg.552 CDS AZTZ01000107.1 187 2757 1 + 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229903.peg.553 CDS AZTZ01000107.1 3362 2862 -2 - 501 hypothetical protein - none -
fig|6666666.229903.peg.554 CDS AZTZ01000107.1 3545 4573 2 + 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229903.peg.555 CDS AZTZ01000107.1 4573 4761 1 + 189 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein
fig|6666666.229903.peg.556 CDS AZTZ01000107.1 4835 5659 2 + 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229903.peg.557 CDS AZTZ01000107.1 5669 6559 2 + 891 Tyrosine recombinase XerC - none -
fig|6666666.229903.peg.558 CDS AZTZ01000107.1 6574 7287 1 + 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229903.peg.559 CDS AZTZ01000107.1 7810 7385 -1 - 426 Excinuclease ATPase subunit - none -
fig|6666666.229903.peg.560 CDS AZTZ01000108.1 55 831 1 + 777 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229903.peg.561 CDS AZTZ01000108.1 899 1537 2 + 639 ABC-type amino acid transport system, permease component - none -
fig|6666666.229903.peg.562 CDS AZTZ01000108.1 1547 2314 2 + 768 ABC-type polar amino acid transport system, ATPase component - none -
fig|6666666.229903.peg.563 CDS AZTZ01000108.1 2610 2323 -3 - 288 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria
fig|6666666.229903.peg.564 CDS AZTZ01000108.1 2975 2613 -2 - 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria
fig|6666666.229903.peg.565 CDS AZTZ01000108.1 3349 2972 -1 - 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria
fig|6666666.229903.peg.566 CDS AZTZ01000108.1 4021 3353 -1 - 669 YheO-like PAS domain - none -
fig|6666666.229903.peg.567 CDS AZTZ01000108.1 4760 4101 -2 - 660 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229903.peg.568 CDS AZTZ01000109.1 1343 120 -2 - 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229903.peg.569 CDS AZTZ01000109.1 4278 1471 -3 - 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229903.peg.570 CDS AZTZ01000109.1 4270 4464 1 + 195 hypothetical protein - none -
fig|6666666.229903.peg.571 CDS AZTZ01000109.1 5136 4498 -3 - 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229903.peg.572 CDS AZTZ01000109.1 5772 5212 -3 - 561 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229903.peg.573 CDS AZTZ01000109.1 7349 5826 -2 - 1524 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229903.peg.574 CDS AZTZ01000109.1 9485 7428 -2 - 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229903.peg.575 CDS AZTZ01000109.1 10055 9558 -2 - 498 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229903.peg.576 CDS AZTZ01000110.1 606 121 -3 - 486 Putative membrane protein - none -
fig|6666666.229903.peg.577 CDS AZTZ01000110.1 1214 609 -2 - 606 Galactoside O-acetyltransferase (EC 2.3.1.18) - none -
fig|6666666.229903.peg.578 CDS AZTZ01000110.1 1816 1214 -1 - 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229903.peg.579 CDS AZTZ01000110.1 1944 2324 3 + 381 FIG00782409: hypothetical protein - none -
fig|6666666.229903.peg.580 CDS AZTZ01000110.1 4855 2840 -1 - 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229903.peg.581 CDS AZTZ01000110.1 5095 4865 -1 - 231 FIG00696102: hypothetical protein - none -
fig|6666666.229903.peg.582 CDS AZTZ01000110.1 5761 5198 -1 - 564 Outer membrane protein 18/16 - none -
fig|6666666.229903.peg.583 CDS AZTZ01000110.1 5977 8778 1 + 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229903.peg.584 CDS AZTZ01000110.1 8793 9110 3 + 318 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229903.peg.585 CDS AZTZ01000110.1 9167 9490 2 + 324 hypothetical protein - none -
fig|6666666.229903.peg.586 CDS AZTZ01000110.1 10154 9597 -2 - 558 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229903.peg.587 CDS AZTZ01000111.1 16 405 1 + 390 FxsA protein - none -
fig|6666666.229903.peg.588 CDS AZTZ01000111.1 491 781 2 + 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229903.peg.589 CDS AZTZ01000111.1 902 2545 2 + 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229903.peg.590 CDS AZTZ01000111.1 3492 2635 -3 - 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines
fig|6666666.229903.peg.591 CDS AZTZ01000112.1 79 3540 1 + 3462 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229903.peg.592 CDS AZTZ01000112.1 3561 4301 3 + 741 Chromosome partition protein MukE MukBEF Chromosome Condensation
fig|6666666.229903.peg.593 CDS AZTZ01000112.1 4301 8791 2 + 4491 Chromosome partition protein MukB MukBEF Chromosome Condensation
fig|6666666.229903.peg.594 CDS AZTZ01000112.1 8957 8814 -2 - 144 hypothetical protein - none -
fig|6666666.229903.peg.595 CDS AZTZ01000113.1 63 1049 3 + 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229903.peg.596 CDS AZTZ01000113.1 1113 2963 3 + 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229903.peg.597 CDS AZTZ01000113.1 3099 4229 3 + 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229903.peg.598 CDS AZTZ01000114.1 79 735 1 + 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229903.peg.599 CDS AZTZ01000114.1 1793 846 -2 - 948 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229903.peg.600 CDS AZTZ01000115.1 177 1109 3 + 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229903.peg.601 CDS AZTZ01000115.1 1186 1842 1 + 657 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229903.peg.602 CDS AZTZ01000115.1 1843 2175 1 + 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229903.peg.603 CDS AZTZ01000115.1 2775 2242 -3 - 534 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229903.peg.604 CDS AZTZ01000116.1 65 1264 2 + 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229903.peg.605 CDS AZTZ01000116.1 1333 1788 1 + 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229903.peg.606 CDS AZTZ01000116.1 1788 2387 3 + 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229903.peg.607 CDS AZTZ01000116.1 2411 2629 2 + 219 FIG00696234: hypothetical protein - none -
fig|6666666.229903.peg.608 CDS AZTZ01000116.1 2667 3311 3 + 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229903.peg.609 CDS AZTZ01000116.1 4814 3444 -2 - 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229903.peg.610 CDS AZTZ01000116.1 5754 4909 -3 - 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229903.peg.611 CDS AZTZ01000116.1 6645 5851 -3 - 795 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229903.peg.612 CDS AZTZ01000117.1 310 1281 1 + 972 Translation elongation factor P Lys34:lysine transferase - none -
fig|6666666.229903.peg.613 CDS AZTZ01000117.1 1585 1337 -1 - 249 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229903.peg.614 CDS AZTZ01000117.1 2729 1659 -2 - 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229903.peg.615 CDS AZTZ01000117.1 2800 3243 1 + 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229903.peg.616 CDS AZTZ01000117.1 3328 3930 1 + 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229903.peg.617 CDS AZTZ01000117.1 3962 5899 2 + 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229903.peg.618 CDS AZTZ01000118.1 467 81 -2 - 387 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229903.peg.619 CDS AZTZ01000118.1 562 774 1 + 213 Copper chaperone Copper homeostasis
fig|6666666.229903.peg.620 CDS AZTZ01000118.1 863 3022 2 + 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229903.peg.621 CDS AZTZ01000118.1 3095 3940 2 + 846 membrane protein, putative - none -
fig|6666666.229903.peg.622 CDS AZTZ01000118.1 4057 4407 1 + 351 Phage-related protein - none -
fig|6666666.229903.peg.623 CDS AZTZ01000118.1 4400 4723 2 + 324 FIG074102: hypothetical protein - none -
fig|6666666.229903.peg.624 CDS AZTZ01000118.1 6027 4783 -3 - 1245 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229903.peg.625 CDS AZTZ01000118.1 6603 6037 -3 - 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229903.peg.626 CDS AZTZ01000118.1 6752 6898 2 + 147 hypothetical protein - none -
fig|6666666.229903.peg.627 CDS AZTZ01000118.1 7146 6862 -3 - 285 Dca - none -
fig|6666666.229903.peg.628 CDS AZTZ01000119.1 136 1497 1 + 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229903.peg.629 CDS AZTZ01000120.1 162 1931 3 + 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229903.peg.630 CDS AZTZ01000120.1 3395 2019 -2 - 1377 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229903.peg.631 CDS AZTZ01000120.1 4053 3373 -3 - 681 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229903.peg.632 CDS AZTZ01000120.1 4570 4253 -1 - 318 Protein ygiW precursor - none -
fig|6666666.229903.peg.633 CDS AZTZ01000121.1 73 1440 1 + 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.634 CDS AZTZ01000121.1 5809 1541 -1 - 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229903.peg.635 CDS AZTZ01000121.1 9226 5912 -1 - 3315 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229903.peg.636 CDS AZTZ01000122.1 117 1106 3 + 990 Cytosine deaminase (EC 3.5.4.1) Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229903.peg.637 CDS AZTZ01000122.1 2069 1203 -2 - 867 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229903.peg.638 CDS AZTZ01000122.1 2179 2604 1 + 426 Universal stress protein A Universal stress protein family
fig|6666666.229903.peg.639 CDS AZTZ01000123.1 1635 868 -3 - 768 Type I restriction-modification system methyltransferase subunit - none -
fig|6666666.229903.peg.640 CDS AZTZ01000123.1 2851 1730 -1 - 1122 Antirestriction protein - none -
fig|6666666.229903.peg.641 CDS AZTZ01000123.1 3051 2806 -3 - 246 FIG00696456: hypothetical protein - none -
fig|6666666.229903.peg.642 CDS AZTZ01000123.1 3286 3146 -1 - 141 hypothetical protein - none -
fig|6666666.229903.peg.643 CDS AZTZ01000123.1 3862 4302 1 + 441 corresponds to STY4575 from Accession AL513382: Salmonella typhi CT18 - none -
fig|6666666.229903.peg.644 CDS AZTZ01000123.1 4310 5224 2 + 915 FIG00696751: hypothetical protein - none -
fig|6666666.229903.peg.645 CDS AZTZ01000124.1 1324 1833 1 + 510 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.646 CDS AZTZ01000124.1 1837 3201 1 + 1365 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.647 CDS AZTZ01000124.1 3182 3781 2 + 600 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.648 CDS AZTZ01000124.1 3818 4327 2 + 510 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.649 CDS AZTZ01000125.1 41 1339 2 + 1299 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229903.peg.650 CDS AZTZ01000125.1 2178 2879 3 + 702 Phage integrase - none -
fig|6666666.229903.peg.651 CDS AZTZ01000126.1 18 965 3 + 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229903.peg.652 CDS AZTZ01000126.1 1308 1186 -3 - 123 hypothetical protein - none -
fig|6666666.229903.peg.653 CDS AZTZ01000126.1 1999 1418 -1 - 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229903.peg.654 CDS AZTZ01000126.1 3428 2337 -2 - 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229903.peg.655 CDS AZTZ01000126.1 4064 3480 -2 - 585 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229903.peg.656 CDS AZTZ01000127.1 572 33 -2 - 540 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229903.peg.657 CDS AZTZ01000127.1 1453 575 -1 - 879 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229903.peg.658 CDS AZTZ01000127.1 2245 1454 -1 - 792 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229903.peg.659 CDS AZTZ01000127.1 3366 2404 -3 - 963 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229903.peg.660 CDS AZTZ01000128.1 1497 64 -3 - 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229903.peg.661 CDS AZTZ01000128.1 2896 1484 -1 - 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229903.peg.662 CDS AZTZ01000128.1 4573 3071 -1 - 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229903.peg.663 CDS AZTZ01000128.1 5463 4588 -3 - 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229903.peg.664 CDS AZTZ01000128.1 5747 5460 -2 - 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229903.peg.665 CDS AZTZ01000128.1 6794 5787 -2 - 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229903.peg.666 CDS AZTZ01000128.1 6961 6833 -1 - 129 hypothetical protein - none -
fig|6666666.229903.peg.667 CDS AZTZ01000128.1 7041 7937 3 + 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229903.peg.668 CDS AZTZ01000129.1 23 568 2 + 546 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229903.peg.669 CDS AZTZ01000129.1 568 1590 1 + 1023 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) Llipid A biosynthesis cluster
fig|6666666.229903.peg.670 CDS AZTZ01000129.1 1727 2137 2 + 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229903.peg.671 CDS AZTZ01000129.1 2158 2946 1 + 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.229903.peg.672 CDS AZTZ01000129.1 3048 2923 -3 - 126 hypothetical protein - none -
fig|6666666.229903.peg.673 CDS AZTZ01000129.1 3030 4214 3 + 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) Llipid A biosynthesis cluster
fig|6666666.229903.peg.674 CDS AZTZ01000129.1 4207 4806 1 + 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229903.peg.675 CDS AZTZ01000129.1 4896 6713 3 + 1818 Putative transport protein - none -
fig|6666666.229903.peg.676 CDS AZTZ01000129.1 6724 7332 1 + 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-316407.3.peg.1371;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.677 CDS AZTZ01000129.1 7343 7975 2 + 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.678 CDS AZTZ01000129.1 7975 8904 1 + 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) CBSS-316407.3.peg.1371;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.679 CDS AZTZ01000129.1 8984 9565 2 + 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229903.peg.680 CDS AZTZ01000130.1 40 876 1 + 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229903.peg.681 CDS AZTZ01000130.1 3568 962 -1 - 2607 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229903.peg.682 CDS AZTZ01000130.1 3667 4563 1 + 897 Transcriptional regulator - none -
fig|6666666.229903.peg.683 CDS AZTZ01000130.1 5455 4607 -1 - 849 COG0613, Predicted metal-dependent phosphoesterases (PHP family) YrdC-YciO-Sua5 protein family
fig|6666666.229903.peg.684 CDS AZTZ01000130.1 6475 5456 -1 - 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229903.peg.685 CDS AZTZ01000130.1 9157 6548 -1 - 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229903.peg.686 CDS AZTZ01000131.1 191 2593 2 + 2403 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229903.peg.687 CDS AZTZ01000131.1 2590 3327 1 + 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229903.peg.688 CDS AZTZ01000131.1 3371 3640 2 + 270 hypothetical protein - none -
fig|6666666.229903.peg.689 CDS AZTZ01000131.1 3661 5103 1 + 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229903.peg.690 CDS AZTZ01000132.1 1558 143 -1 - 1416 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229903.peg.691 CDS AZTZ01000132.1 2705 1578 -2 - 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229903.peg.692 CDS AZTZ01000132.1 5436 2707 -3 - 2730 ABC-type multidrug transport system, permease component - none -
fig|6666666.229903.peg.693 CDS AZTZ01000132.1 6419 5439 -2 - 981 HlyD family secretion protein - none -
fig|6666666.229903.peg.694 CDS AZTZ01000133.1 987 679 -3 - 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229903.peg.695 CDS AZTZ01000133.1 3242 1020 -2 - 2223 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229903.peg.696 CDS AZTZ01000134.1 18 653 3 + 636 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229903.peg.697 CDS AZTZ01000134.1 1976 729 -2 - 1248 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229903.peg.698 CDS AZTZ01000134.1 3374 1989 -2 - 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229903.peg.699 CDS AZTZ01000134.1 4148 3402 -2 - 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229903.peg.700 CDS AZTZ01000134.1 5207 4161 -2 - 1047 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229903.peg.701 CDS AZTZ01000134.1 5243 7744 2 + 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229903.peg.702 CDS AZTZ01000134.1 7754 8383 2 + 630 Nitrate/nitrite response regulator protein - none -
fig|6666666.229903.peg.703 CDS AZTZ01000134.1 8450 10309 2 + 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229903.peg.704 CDS AZTZ01000134.1 10337 14218 2 + 3882 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229903.peg.705 CDS AZTZ01000134.1 14221 15768 1 + 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229903.peg.706 CDS AZTZ01000134.1 17448 15832 -3 - 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229903.peg.707 CDS AZTZ01000135.1 807 10 -3 - 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229903.peg.708 CDS AZTZ01000135.1 1823 810 -2 - 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.709 CDS AZTZ01000135.1 2423 1911 -2 - 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229903.peg.710 CDS AZTZ01000135.1 2723 2439 -2 - 285 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229903.peg.711 CDS AZTZ01000136.1 8 1018 2 + 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229903.peg.712 CDS AZTZ01000136.1 2939 1092 -2 - 1848 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229903.peg.713 CDS AZTZ01000136.1 2965 3099 1 + 135 hypothetical protein - none -
fig|6666666.229903.peg.714 CDS AZTZ01000136.1 4300 3080 -1 - 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229903.peg.715 CDS AZTZ01000137.1 71 1036 2 + 966 6-phosphofructokinase (EC 2.7.1.11) D-Tagatose and Galactitol Utilization;
Glycolysis and Gluconeogenesis
fig|6666666.229903.peg.716 CDS AZTZ01000137.1 2315 1140 -2 - 1176 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229903.peg.717 CDS AZTZ01000137.1 3444 2317 -3 - 1128 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229903.peg.718 CDS AZTZ01000137.1 3799 3446 -1 - 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229903.peg.719 CDS AZTZ01000137.1 4150 3800 -1 - 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229903.peg.720 CDS AZTZ01000138.1 622 167 -1 - 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229903.peg.721 CDS AZTZ01000138.1 868 623 -1 - 246 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229903.peg.722 CDS AZTZ01000138.1 1308 868 -3 - 441 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229903.peg.723 CDS AZTZ01000138.1 2416 1403 -1 - 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229903.peg.724 CDS AZTZ01000139.1 7 765 1 + 759 Galactitol utilization operon repressor D-Tagatose and Galactitol Utilization
fig|6666666.229903.peg.725 CDS AZTZ01000139.1 2742 889 -3 - 1854 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229903.peg.726 CDS AZTZ01000140.1 956 366 -2 - 591 O-methyltransferase - none -
fig|6666666.229903.peg.727 CDS AZTZ01000140.1 1915 1049 -1 - 867 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229903.peg.728 CDS AZTZ01000140.1 3706 1928 -1 - 1779 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229903.peg.729 CDS AZTZ01000140.1 4377 3703 -3 - 675 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229903.peg.730 CDS AZTZ01000140.1 7206 4492 -3 - 2715 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229903.peg.731 CDS AZTZ01000140.1 8031 7378 -3 - 654 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229903.peg.732 CDS AZTZ01000141.1 1572 1150 -3 - 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229903.peg.733 CDS AZTZ01000141.1 2011 1658 -1 - 354 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229903.peg.734 CDS AZTZ01000142.1 229 804 1 + 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.229903.peg.735 CDS AZTZ01000142.1 1550 840 -2 - 711 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229903.peg.736 CDS AZTZ01000143.1 69 1346 3 + 1278 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229903.peg.737 CDS AZTZ01000144.1 2 1423 2 + 1422 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229903.peg.738 CDS AZTZ01000145.1 39 2120 3 + 2082 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229903.peg.739 CDS AZTZ01000145.1 3014 2202 -2 - 813 Inositol transport system permease protein Inositol catabolism
fig|6666666.229903.peg.740 CDS AZTZ01000146.1 1888 305 -1 - 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229903.peg.741 CDS AZTZ01000146.1 2035 2148 1 + 114 hypothetical protein - none -
fig|6666666.229903.peg.742 CDS AZTZ01000146.1 2253 3080 3 + 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229903.peg.743 CDS AZTZ01000146.1 3169 4506 1 + 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229903.peg.744 CDS AZTZ01000146.1 4700 4945 2 + 246 FIG00696862: hypothetical protein - none -
fig|6666666.229903.peg.745 CDS AZTZ01000148.1 78 332 3 + 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) - none -
fig|6666666.229903.peg.746 CDS AZTZ01000148.1 445 852 1 + 408 ATP synthase F0 sector subunit b - none -
fig|6666666.229903.peg.747 CDS AZTZ01000148.1 866 1414 2 + 549 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229903.peg.748 CDS AZTZ01000148.1 1427 2968 2 + 1542 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229903.peg.749 CDS AZTZ01000148.1 2984 3853 2 + 870 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229903.peg.750 CDS AZTZ01000148.1 3870 5243 3 + 1374 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229903.peg.751 CDS AZTZ01000149.1 15 281 3 + 267 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis
fig|6666666.229903.peg.752 CDS AZTZ01000149.1 387 884 3 + 498 Phospholipid-binding protein - none -
fig|6666666.229903.peg.753 CDS AZTZ01000149.1 1003 1479 1 + 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) RNA methylation
fig|6666666.229903.peg.754 CDS AZTZ01000149.1 2450 1575 -2 - 876 Membrane protein LAPB - none -
fig|6666666.229903.peg.755 CDS AZTZ01000149.1 2575 2447 -1 - 129 hypothetical protein - none -
fig|6666666.229903.peg.756 CDS AZTZ01000149.1 2585 3199 2 + 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229903.peg.757 CDS AZTZ01000149.1 3314 4180 2 + 867 MG(2+) CHELATASE FAMILY PROTEIN CBSS-203122.12.peg.188
fig|6666666.229903.peg.758 CDS AZTZ01000150.1 964 74 -1 - 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229903.peg.759 CDS AZTZ01000150.1 2530 986 -1 - 1545 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229903.peg.760 CDS AZTZ01000150.1 3869 2679 -2 - 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229903.peg.761 CDS AZTZ01000151.1 13 993 1 + 981 Putative ATP /GTP binding protein - none -
fig|6666666.229903.peg.762 CDS AZTZ01000151.1 2289 1255 -3 - 1035 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229903.peg.763 CDS AZTZ01000151.1 3437 2283 -2 - 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229903.peg.764 CDS AZTZ01000152.1 6010 20 -1 - 5991 VgrG protein - none -
fig|6666666.229903.peg.765 CDS AZTZ01000153.1 1117 89 -1 - 1029 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229903.peg.766 CDS AZTZ01000153.1 1936 1142 -1 - 795 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229903.peg.767 CDS AZTZ01000153.1 2739 1936 -3 - 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229903.peg.768 CDS AZTZ01000153.1 4704 3286 -3 - 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229903.peg.769 CDS AZTZ01000153.1 5512 4667 -1 - 846 O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-) - none -
fig|6666666.229903.peg.770 CDS AZTZ01000154.1 62 862 2 + 801 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229903.peg.771 CDS AZTZ01000154.1 974 1951 2 + 978 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229903.peg.772 CDS AZTZ01000154.1 1944 2072 3 + 129 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229903.peg.773 CDS AZTZ01000154.1 2083 3414 1 + 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229903.peg.774 CDS AZTZ01000155.1 55 630 1 + 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229903.peg.775 CDS AZTZ01000155.1 1988 789 -2 - 1200 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229903.peg.776 CDS AZTZ01000155.1 3070 1985 -1 - 1086 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229903.peg.777 CDS AZTZ01000155.1 3597 3067 -3 - 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229903.peg.778 CDS AZTZ01000155.1 5500 3590 -1 - 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229903.peg.779 CDS AZTZ01000156.1 74 1498 2 + 1425 helicase (Snf2/Rad54 family) - none -
fig|6666666.229903.peg.780 CDS AZTZ01000156.1 1595 2950 2 + 1356 Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.229903.peg.781 CDS AZTZ01000157.1 1252 623 -1 - 630 Exopolysaccharide biosynthesis protein - none -
fig|6666666.229903.peg.782 CDS AZTZ01000157.1 2277 1306 -3 - 972 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229903.peg.783 CDS AZTZ01000157.1 2338 2817 1 + 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229903.peg.784 CDS AZTZ01000157.1 4676 2931 -2 - 1746 Ferrichrome-iron receptor - none -
fig|6666666.229903.peg.785 CDS AZTZ01000157.1 6868 4730 -1 - 2139 Ferrichrome-iron receptor - none -
fig|6666666.229903.peg.786 CDS AZTZ01000158.1 132 1115 3 + 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229903.peg.787 CDS AZTZ01000158.1 1138 1428 1 + 291 hypothetical protein - none -
fig|6666666.229903.peg.788 CDS AZTZ01000158.1 2791 1493 -1 - 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229903.peg.789 CDS AZTZ01000158.1 3844 2879 -1 - 966 tRNA (5-methoxyuridine) 34 synthase tRNAmodification position 34
fig|6666666.229903.peg.790 CDS AZTZ01000158.1 5378 3858 -2 - 1521 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229903.peg.791 CDS AZTZ01000158.1 5517 6992 3 + 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229903.peg.792 CDS AZTZ01000158.1 7110 7757 3 + 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229903.peg.793 CDS AZTZ01000158.1 7772 8470 2 + 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229903.peg.794 CDS AZTZ01000158.1 9217 8828 -1 - 390 Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like - none -
fig|6666666.229903.peg.795 CDS AZTZ01000159.1 7 690 1 + 684 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229903.peg.796 CDS AZTZ01000159.1 711 1430 3 + 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229903.peg.797 CDS AZTZ01000159.1 1435 2097 1 + 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229903.peg.798 CDS AZTZ01000159.1 2100 2783 3 + 684 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229903.peg.799 CDS AZTZ01000160.1 18 578 3 + 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.229903.peg.800 CDS AZTZ01000160.1 644 2986 2 + 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229903.peg.801 CDS AZTZ01000160.1 3541 3077 -1 - 465 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229903.peg.802 CDS AZTZ01000161.1 83 292 2 + 210 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.229903.peg.803 CDS AZTZ01000161.1 1326 394 -3 - 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229903.peg.804 CDS AZTZ01000161.1 1475 1278 -2 - 198 hypothetical protein - none -
fig|6666666.229903.peg.805 CDS AZTZ01000161.1 1755 1519 -3 - 237 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229903.peg.806 CDS AZTZ01000161.1 1944 1831 -3 - 114 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229903.peg.807 CDS AZTZ01000161.1 2006 2131 2 + 126 hypothetical protein - none -
fig|6666666.229903.peg.808 CDS AZTZ01000161.1 2162 2761 2 + 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229903.peg.809 CDS AZTZ01000161.1 2764 3561 1 + 798 Protein of unknown function DUF81 - none -
fig|6666666.229903.peg.810 CDS AZTZ01000161.1 3570 4367 3 + 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229903.peg.811 CDS AZTZ01000161.1 4364 5215 2 + 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229903.peg.812 CDS AZTZ01000161.1 5577 6068 3 + 492 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing;
tRNAmodification position 34
fig|6666666.229903.peg.813 CDS AZTZ01000161.1 6169 6729 1 + 561 Protein of unknown function DUF414 - none -
fig|6666666.229903.peg.814 CDS AZTZ01000161.1 6742 7176 1 + 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229903.peg.815 CDS AZTZ01000161.1 7196 8563 2 + 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229903.peg.816 CDS AZTZ01000161.1 9082 8639 -1 - 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229903.peg.817 CDS AZTZ01000162.1 1017 757 -3 - 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229903.peg.818 CDS AZTZ01000162.1 1972 1067 -1 - 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229903.peg.819 CDS AZTZ01000162.1 2324 2091 -2 - 234 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229903.peg.820 CDS AZTZ01000162.1 2953 2339 -1 - 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229903.peg.821 CDS AZTZ01000162.1 3841 3002 -1 - 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.5.3) - none -
fig|6666666.229903.peg.822 CDS AZTZ01000162.1 4460 3843 -2 - 618 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3) - none -
fig|6666666.229903.peg.823 CDS AZTZ01000162.1 6792 4471 -3 - 2322 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.5.3) - none -
fig|6666666.229903.peg.824 CDS AZTZ01000163.1 32 898 2 + 867 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229903.peg.825 CDS AZTZ01000163.1 920 1642 2 + 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229903.peg.826 CDS AZTZ01000163.1 1674 2231 3 + 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229903.peg.827 CDS AZTZ01000163.1 2273 3961 2 + 1689 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) - none -
fig|6666666.229903.peg.828 CDS AZTZ01000163.1 4028 5185 2 + 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229903.peg.829 CDS AZTZ01000163.1 6658 5273 -1 - 1386 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229903.peg.830 CDS AZTZ01000164.1 1498 1782 1 + 285 hypothetical protein - none -
fig|6666666.229903.peg.831 CDS AZTZ01000166.1 63 1367 3 + 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229903.peg.832 CDS AZTZ01000167.1 1583 1413 -2 - 171 FIG002927: hypothetical protein - none -
fig|6666666.229903.peg.833 CDS AZTZ01000168.1 61 444 1 + 384 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.229903.peg.834 CDS AZTZ01000168.1 550 428 -1 - 123 hypothetical protein - none -
fig|6666666.229903.peg.835 CDS AZTZ01000168.1 613 2409 1 + 1797 Translation elongation factor LepA Universal GTPases
fig|6666666.229903.peg.836 CDS AZTZ01000168.1 2420 3442 2 + 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229903.peg.837 CDS AZTZ01000168.1 3449 4129 2 + 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229903.peg.838 CDS AZTZ01000168.1 4126 5034 1 + 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.229903.peg.839 CDS AZTZ01000168.1 6503 5148 -2 - 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNAmodification position 34
fig|6666666.229903.peg.840 CDS AZTZ01000168.1 6548 6661 2 + 114 hypothetical protein - none -
fig|6666666.229903.peg.841 CDS AZTZ01000168.1 8295 6706 -3 - 1590 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229903.peg.842 CDS AZTZ01000168.1 8600 8337 -2 - 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229903.peg.843 CDS AZTZ01000168.1 8890 8555 -1 - 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229903.peg.844 CDS AZTZ01000168.1 9070 8936 -1 - 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229903.peg.845 CDS AZTZ01000169.1 76 2907 1 + 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229903.peg.846 CDS AZTZ01000169.1 3385 2975 -1 - 411 Mercuric resistance operon regulatory protein - none -
fig|6666666.229903.peg.847 CDS AZTZ01000169.1 3817 3506 -1 - 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229903.peg.848 CDS AZTZ01000169.1 3784 3912 1 + 129 hypothetical protein - none -
fig|6666666.229903.peg.849 CDS AZTZ01000169.1 3963 4226 3 + 264 hypothetical protein - none -
fig|6666666.229903.peg.850 CDS AZTZ01000169.1 4299 6998 3 + 2700 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229903.peg.851 CDS AZTZ01000169.1 7075 7479 1 + 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229903.peg.852 CDS AZTZ01000170.1 1535 234 -2 - 1302 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229903.peg.853 CDS AZTZ01000170.1 1905 1735 -3 - 171 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229903.peg.854 CDS AZTZ01000170.1 3262 1931 -1 - 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229903.peg.855 CDS AZTZ01000170.1 3249 3377 3 + 129 hypothetical protein - none -
fig|6666666.229903.peg.856 CDS AZTZ01000170.1 3388 4059 1 + 672 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229903.peg.857 CDS AZTZ01000170.1 4823 4134 -2 - 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229903.peg.858 CDS AZTZ01000170.1 5203 5862 1 + 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229903.peg.859 CDS AZTZ01000170.1 6011 5859 -2 - 153 hypothetical protein - none -
fig|6666666.229903.peg.860 CDS AZTZ01000170.1 6687 6181 -3 - 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis
fig|6666666.229903.peg.861 CDS AZTZ01000171.1 950 537 -2 - 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229903.peg.862 CDS AZTZ01000171.1 1840 1016 -1 - 825 Nucleoid-associated protein NdpA - none -
fig|6666666.229903.peg.863 CDS AZTZ01000174.1 66 413 3 + 348 probable integral membrane protein Cj0014c - none -
fig|6666666.229903.peg.864 CDS AZTZ01000174.1 1715 465 -2 - 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229903.peg.865 CDS AZTZ01000174.1 1852 1733 -1 - 120 hypothetical protein - none -
fig|6666666.229903.peg.866 CDS AZTZ01000174.1 1975 2283 1 + 309 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229903.peg.867 CDS AZTZ01000174.1 2283 4172 3 + 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229903.peg.868 CDS AZTZ01000174.1 4269 6581 3 + 2313 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229903.peg.869 CDS AZTZ01000174.1 6541 6690 1 + 150 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229903.peg.870 CDS AZTZ01000174.1 7661 6747 -2 - 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229903.peg.871 CDS AZTZ01000175.1 10 558 1 + 549 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229903.peg.872 CDS AZTZ01000176.1 948 100 -3 - 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229903.peg.873 CDS AZTZ01000176.1 1802 945 -2 - 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229903.peg.874 CDS AZTZ01000176.1 2530 1802 -1 - 729 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229903.peg.875 CDS AZTZ01000176.1 3150 2692 -3 - 459 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229903.peg.876 CDS AZTZ01000177.1 1851 397 -3 - 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229903.peg.877 CDS AZTZ01000178.1 42 1184 3 + 1143 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Universal GTPases
fig|6666666.229903.peg.878 CDS AZTZ01000178.1 2195 1254 -2 - 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229903.peg.879 CDS AZTZ01000179.1 630 76 -3 - 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) - none -
fig|6666666.229903.peg.880 CDS AZTZ01000179.1 1565 630 -2 - 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) - none -
fig|6666666.229903.peg.881 CDS AZTZ01000180.1 5 139 2 + 135 hypothetical protein - none -
fig|6666666.229903.peg.882 CDS AZTZ01000180.1 515 1528 2 + 1014 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229903.peg.883 CDS AZTZ01000180.1 1532 1825 2 + 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229903.peg.884 CDS AZTZ01000181.1 955 137 -1 - 819 Peptide transport system ATP-binding protein SapF - none -
fig|6666666.229903.peg.885 CDS AZTZ01000181.1 1318 959 -1 - 360 Peptide transport system ATP-binding protein SapD - none -
fig|6666666.229903.peg.886 CDS AZTZ01000182.1 1594 707 -1 - 888 Peptide transport system permease protein SapC - none -
fig|6666666.229903.peg.887 CDS AZTZ01000183.1 732 79 -3 - 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229903.peg.888 CDS AZTZ01000183.1 821 1549 2 + 729 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229903.peg.889 CDS AZTZ01000183.1 1600 2514 1 + 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229903.peg.890 CDS AZTZ01000183.1 3155 2571 -2 - 585 Putative lipoprotein yceB precursor - none -
fig|6666666.229903.peg.891 CDS AZTZ01000183.1 3318 3878 3 + 561 unknown - none -
fig|6666666.229903.peg.892 CDS AZTZ01000183.1 3944 4684 2 + 741 serine/threonine protein kinase - none -
fig|6666666.229903.peg.893 CDS AZTZ01000183.1 4681 4809 1 + 129 hypothetical protein - none -
fig|6666666.229903.peg.894 CDS AZTZ01000183.1 5890 5024 -1 - 867 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.229903.peg.895 CDS AZTZ01000183.1 7883 6150 -2 - 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229903.peg.896 CDS AZTZ01000183.1 9646 7883 -1 - 1764 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229903.peg.897 CDS AZTZ01000183.1 10703 9750 -2 - 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229903.peg.898 CDS AZTZ01000183.1 11619 10762 -3 - 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229903.peg.899 CDS AZTZ01000183.1 11923 11795 -1 - 129 hypothetical protein - none -
fig|6666666.229903.peg.900 CDS AZTZ01000183.1 12771 11950 -3 - 822 Aldose 1-epimerase - none -
fig|6666666.229903.peg.901 CDS AZTZ01000184.1 630 184 -3 - 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229903.peg.902 CDS AZTZ01000184.1 1519 653 -1 - 867 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229903.peg.903 CDS AZTZ01000185.1 3 1235 3 + 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229903.peg.904 CDS AZTZ01000185.1 1369 1232 -1 - 138 hypothetical protein - none -
fig|6666666.229903.peg.905 CDS AZTZ01000185.1 1543 1953 1 + 411 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229903.peg.906 CDS AZTZ01000185.1 1919 2590 2 + 672 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229903.peg.907 CDS AZTZ01000185.1 3316 2675 -1 - 642 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229903.peg.908 CDS AZTZ01000185.1 4728 3325 -3 - 1404 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229903.peg.909 CDS AZTZ01000185.1 5137 4739 -1 - 399 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229903.peg.910 CDS AZTZ01000186.1 816 220 -3 - 597 hypothetical protein - none -
fig|6666666.229903.peg.911 CDS AZTZ01000186.1 2808 829 -3 - 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229903.peg.912 CDS AZTZ01000186.1 6476 2808 -2 - 3669 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229903.peg.913 CDS AZTZ01000186.1 6821 6546 -2 - 276 DsrE-related protein - none -
fig|6666666.229903.peg.914 CDS AZTZ01000187.1 2832 1513 -3 - 1320 Xylose isomerase (EC 5.3.1.5) - none -
fig|6666666.229903.peg.915 CDS AZTZ01000187.1 3090 4088 3 + 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF - none -
fig|6666666.229903.peg.916 CDS AZTZ01000187.1 4148 4465 2 + 318 D-xylose transport ATP-binding protein XylG - none -
fig|6666666.229903.peg.917 CDS AZTZ01000187.1 4449 5660 3 + 1212 D-xylose transport ATP-binding protein XylG - none -
fig|6666666.229903.peg.918 CDS AZTZ01000187.1 5664 6323 3 + 660 Xylose ABC transporter, permease protein XylH - none -
fig|6666666.229903.peg.919 CDS AZTZ01000187.1 6601 6798 1 + 198 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229903.peg.920 CDS AZTZ01000188.1 1750 92 -1 - 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229903.peg.921 CDS AZTZ01000189.1 67 678 1 + 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229903.peg.922 CDS AZTZ01000190.1 55 1740 1 + 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229903.peg.923 CDS AZTZ01000190.1 2000 2989 2 + 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229903.peg.924 CDS AZTZ01000191.1 1468 143 -1 - 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229903.peg.925 CDS AZTZ01000191.1 1639 2271 1 + 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229903.peg.926 CDS AZTZ01000192.1 162 980 3 + 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229903.peg.927 CDS AZTZ01000192.1 983 1363 2 + 381 CrcB protein - none -
fig|6666666.229903.peg.928 CDS AZTZ01000192.1 2264 1341 -2 - 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229903.peg.929 CDS AZTZ01000192.1 3402 2257 -3 - 1146 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229903.peg.930 CDS AZTZ01000192.1 3436 3597 1 + 162 hypothetical protein - none -
fig|6666666.229903.peg.931 CDS AZTZ01000194.1 56 652 2 + 597 CRISPR-associated protein, Csd2/Csh2 family - none -
fig|6666666.229903.peg.932 CDS AZTZ01000194.1 842 1495 2 + 654 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229903.peg.933 CDS AZTZ01000195.1 1355 60 -2 - 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229903.peg.934 CDS AZTZ01000195.1 2845 1481 -1 - 1365 lipoprotein, putative - none -
fig|6666666.229903.peg.935 CDS AZTZ01000195.1 3904 3020 -1 - 885 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229903.peg.936 CDS AZTZ01000195.1 5031 3901 -3 - 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229903.peg.937 CDS AZTZ01000195.1 5117 6487 2 + 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229903.peg.938 CDS AZTZ01000195.1 7011 6658 -3 - 354 Putative exported protein precursor - none -
fig|6666666.229903.peg.939 CDS AZTZ01000195.1 7750 7031 -1 - 720 Putative exported protein precursor - none -
fig|6666666.229903.peg.940 CDS AZTZ01000196.1 903 115 -3 - 789 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.941 CDS AZTZ01000196.1 1511 900 -2 - 612 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.942 CDS AZTZ01000196.1 2600 1521 -2 - 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.943 CDS AZTZ01000196.1 2730 2611 -3 - 120 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.944 CDS AZTZ01000197.1 180 2609 3 + 2430 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.229903.peg.945 CDS AZTZ01000197.1 2656 4404 1 + 1749 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229903.peg.946 CDS AZTZ01000197.1 4430 5404 2 + 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) - none -
fig|6666666.229903.peg.947 CDS AZTZ01000197.1 5426 5605 2 + 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.229903.peg.948 CDS AZTZ01000198.1 433 1437 1 + 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229903.peg.949 CDS AZTZ01000198.1 1446 3074 3 + 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229903.peg.950 CDS AZTZ01000198.1 3058 3693 1 + 636 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229903.peg.951 CDS AZTZ01000199.1 376 1413 1 + 1038 Putative uncharacterized protein ydbH - none -
fig|6666666.229903.peg.952 CDS AZTZ01000199.1 1410 1640 3 + 231 FIG00354920: hypothetical protein - none -
fig|6666666.229903.peg.953 CDS AZTZ01000199.1 2534 2710 2 + 177 Integrase - none -
fig|6666666.229903.peg.954 CDS AZTZ01000199.1 3900 2911 -3 - 990 Putative uncharacterized protein ydbH - none -
fig|6666666.229903.peg.955 CDS AZTZ01000199.1 4608 3907 -3 - 702 probable exported protein STY1423 - none -
fig|6666666.229903.peg.956 CDS AZTZ01000199.1 5330 4713 -2 - 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229903.peg.957 CDS AZTZ01000200.1 629 33 -2 - 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.958 CDS AZTZ01000200.1 726 1079 3 + 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229903.peg.959 CDS AZTZ01000200.1 1100 2530 2 + 1431 Transglycosylase, Slt family - none -
fig|6666666.229903.peg.960 CDS AZTZ01000200.1 2542 2688 1 + 147 hypothetical protein - none -
fig|6666666.229903.peg.961 CDS AZTZ01000200.1 3273 2734 -3 - 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229903.peg.962 CDS AZTZ01000200.1 4841 3297 -2 - 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229903.peg.963 CDS AZTZ01000201.1 906 577 -3 - 330 hypothetical protein - none -
fig|6666666.229903.peg.964 CDS AZTZ01000202.1 36 743 3 + 708 Aerobic respiration control protein arcA - none -
fig|6666666.229903.peg.965 CDS AZTZ01000202.1 1837 839 -1 - 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229903.peg.966 CDS AZTZ01000202.1 2817 1834 -3 - 984 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229903.peg.967 CDS AZTZ01000202.1 3765 2827 -3 - 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229903.peg.968 CDS AZTZ01000202.1 4002 3775 -3 - 228 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229903.peg.969 CDS AZTZ01000203.1 1008 64 -3 - 945 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229903.peg.970 CDS AZTZ01000203.1 1916 1059 -2 - 858 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229903.peg.971 CDS AZTZ01000204.1 1564 167 -1 - 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229903.peg.972 CDS AZTZ01000204.1 1591 2205 1 + 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229903.peg.973 CDS AZTZ01000204.1 2387 2238 -2 - 150 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229903.peg.974 CDS AZTZ01000205.1 1050 106 -3 - 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycolate, glyoxylate interconversions
fig|6666666.229903.peg.975 CDS AZTZ01000205.1 1772 1206 -2 - 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229903.peg.976 CDS AZTZ01000205.1 1875 2849 3 + 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229903.peg.977 CDS AZTZ01000206.1 26 925 2 + 900 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229903.peg.978 CDS AZTZ01000206.1 947 2026 2 + 1080 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229903.peg.979 CDS AZTZ01000206.1 2029 3723 1 + 1695 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229903.peg.980 CDS AZTZ01000206.1 3745 4803 1 + 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229903.peg.981 CDS AZTZ01000206.1 5467 4931 -1 - 537 Putative transporting ATPase - none -
fig|6666666.229903.peg.982 CDS AZTZ01000207.1 74 1540 2 + 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.229903.peg.983 CDS AZTZ01000207.1 1716 1895 3 + 180 hypothetical protein - none -
fig|6666666.229903.peg.984 CDS AZTZ01000208.1 130 948 1 + 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229903.peg.985 CDS AZTZ01000208.1 3753 1153 -3 - 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229903.peg.986 CDS AZTZ01000209.1 195 374 3 + 180 hypothetical protein - none -
fig|6666666.229903.peg.987 CDS AZTZ01000209.1 505 371 -1 - 135 hypothetical protein - none -
fig|6666666.229903.peg.988 CDS AZTZ01000209.1 612 1922 3 + 1311 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229903.peg.989 CDS AZTZ01000209.1 2437 2018 -1 - 420 Putative Holliday junction resolvase YggF Cluster containing Glutathione synthetase
fig|6666666.229903.peg.990 CDS AZTZ01000209.1 2994 2437 -3 - 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229903.peg.991 CDS AZTZ01000209.1 3647 3012 -2 - 636 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
RNA methylation
fig|6666666.229903.peg.992 CDS AZTZ01000209.1 4137 3820 -3 - 318 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229903.peg.993 CDS AZTZ01000209.1 5178 4291 -3 - 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229903.peg.994 CDS AZTZ01000209.1 6618 5254 -3 - 1365 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229903.peg.995 CDS AZTZ01000209.1 6832 6650 -1 - 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229903.peg.996 CDS AZTZ01000210.1 1464 40 -3 - 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229903.peg.997 CDS AZTZ01000210.1 3010 1475 -1 - 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229903.peg.998 CDS AZTZ01000211.1 65 1816 2 + 1752 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229903.peg.999 CDS AZTZ01000211.1 1894 3042 1 + 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229903.peg.1000 CDS AZTZ01000211.1 3117 3629 3 + 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229903.peg.1001 CDS AZTZ01000211.1 4744 3734 -1 - 1011 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229903.peg.1002 CDS AZTZ01000211.1 5643 4747 -3 - 897 Inosose dehydratase (EC 4.2.1.44) Inositol catabolism
fig|6666666.229903.peg.1003 CDS AZTZ01000211.1 7645 5699 -1 - 1947 Epi-inositol hydrolase (EC 3.7.1.-) Inositol catabolism
fig|6666666.229903.peg.1004 CDS AZTZ01000212.1 1312 551 -1 - 762 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229903.peg.1005 CDS AZTZ01000213.1 45 1628 3 + 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229903.peg.1006 CDS AZTZ01000213.1 1694 2470 2 + 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229903.peg.1007 CDS AZTZ01000213.1 2488 2982 1 + 495 Protein yfbU - none -
fig|6666666.229903.peg.1008 CDS AZTZ01000215.1 112 1434 1 + 1323 Cell envelope opacity-associated protein A - none -
fig|6666666.229903.peg.1009 CDS AZTZ01000215.1 1547 1870 2 + 324 opacity associated protein - none -
fig|6666666.229903.peg.1010 CDS AZTZ01000215.1 2867 1962 -2 - 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229903.peg.1011 CDS AZTZ01000215.1 2930 3745 2 + 816 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229903.peg.1012 CDS AZTZ01000215.1 3745 4911 1 + 1167 Probable 3-phenylpropionic acid transporter - none -
fig|6666666.229903.peg.1013 CDS AZTZ01000215.1 4908 5801 3 + 894 Tyrosine recombinase XerD - none -
fig|6666666.229903.peg.1014 CDS AZTZ01000215.1 5965 7263 1 + 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229903.peg.1015 CDS AZTZ01000216.1 59 751 2 + 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229903.peg.1016 CDS AZTZ01000216.1 1473 886 -3 - 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229903.peg.1017 CDS AZTZ01000216.1 2122 1538 -1 - 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
LOS core oligosaccharide biosynthesis
fig|6666666.229903.peg.1018 CDS AZTZ01000216.1 2493 2134 -3 - 360 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229903.peg.1019 CDS AZTZ01000216.1 4221 2503 -3 - 1719 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229903.peg.1020 CDS AZTZ01000217.1 106 963 1 + 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229903.peg.1021 CDS AZTZ01000217.1 995 2341 2 + 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA processing;
tRNAmodification position 34
fig|6666666.229903.peg.1022 CDS AZTZ01000217.1 3464 2448 -2 - 1017 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229903.peg.1023 CDS AZTZ01000217.1 3457 3579 1 + 123 hypothetical protein - none -
fig|6666666.229903.peg.1024 CDS AZTZ01000217.1 3968 3693 -2 - 276 Integral membrane protein - none -
fig|6666666.229903.peg.1025 CDS AZTZ01000218.1 3 2126 3 + 2124 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229903.peg.1028 CDS AZTZ01000218.1 3168 2296 -3 - 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) TCA Cycle
fig|6666666.229903.peg.1029 CDS AZTZ01000218.1 4348 3179 -1 - 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) TCA Cycle
fig|6666666.229903.peg.1030 CDS AZTZ01000219.1 2296 161 -1 - 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229903.peg.1031 CDS AZTZ01000219.1 3566 2364 -2 - 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229903.peg.1032 CDS AZTZ01000220.1 76 2151 1 + 2076 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229903.peg.1033 CDS AZTZ01000221.1 31 144 1 + 114 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229903.peg.1034 CDS AZTZ01000221.1 161 1795 2 + 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229903.peg.1035 CDS AZTZ01000221.1 2526 1906 -3 - 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229903.peg.1036 CDS AZTZ01000221.1 3311 2538 -2 - 774 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229903.peg.1037 CDS AZTZ01000222.1 85 990 1 + 906 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229903.peg.1038 CDS AZTZ01000222.1 1041 1541 3 + 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229903.peg.1039 CDS AZTZ01000222.1 2307 1729 -3 - 579 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229903.peg.1040 CDS AZTZ01000222.1 2379 3740 3 + 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229903.peg.1041 CDS AZTZ01000225.1 1599 82 -3 - 1518 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229903.peg.1042 CDS AZTZ01000225.1 2691 1609 -3 - 1083 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229903.peg.1043 CDS AZTZ01000226.1 639 160 -3 - 480 Hydrogenase maturation protease (EC 3.4.24.-) - none -
fig|6666666.229903.peg.1044 CDS AZTZ01000226.1 2348 639 -2 - 1710 Uptake hydrogenase large subunit (EC 1.12.99.6) Hydrogenases
fig|6666666.229903.peg.1045 CDS AZTZ01000226.1 3574 2348 -1 - 1227 Ni/Fe-hydrogenase 2 B-type cytochrome subunit Hydrogenases
fig|6666666.229903.peg.1046 CDS AZTZ01000226.1 4607 3567 -2 - 1041 Fe-S-cluster-containing hydrogenase components 1 Anaerobic respiratory reductases;
Hydrogenases
fig|6666666.229903.peg.1047 CDS AZTZ01000226.1 5757 4609 -3 - 1149 Uptake hydrogenase small subunit precursor (EC 1.12.99.6) Hydrogenases
fig|6666666.229903.peg.1048 CDS AZTZ01000227.1 93 383 3 + 291 Predicted transcriptional regulator of the myo-inositol catabolic operon Inositol catabolism
fig|6666666.229903.peg.1049 CDS AZTZ01000227.1 2329 422 -1 - 1908 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain Inositol catabolism;
Inositol catabolism
fig|6666666.229903.peg.1050 CDS AZTZ01000228.1 338 838 2 + 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229903.peg.1051 CDS AZTZ01000228.1 844 2043 1 + 1200 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229903.peg.1052 CDS AZTZ01000228.1 2040 2420 3 + 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229903.peg.1053 CDS AZTZ01000228.1 3894 2464 -3 - 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229903.peg.1054 CDS AZTZ01000229.1 31 789 1 + 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229903.peg.1055 CDS AZTZ01000229.1 795 1346 3 + 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229903.peg.1056 CDS AZTZ01000229.1 1350 1820 3 + 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229903.peg.1057 CDS AZTZ01000229.1 1823 2119 2 + 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229903.peg.1058 CDS AZTZ01000230.1 1381 119 -1 - 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229903.peg.1059 CDS AZTZ01000230.1 2247 1456 -3 - 792 FIG001154: CcsA-related protein - none -
fig|6666666.229903.peg.1060 CDS AZTZ01000230.1 2401 3780 1 + 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229903.peg.1061 CDS AZTZ01000230.1 4098 3931 -3 - 168 hypothetical protein - none -
fig|6666666.229903.peg.1062 CDS AZTZ01000230.1 5187 4357 -3 - 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229903.peg.1063 CDS AZTZ01000230.1 6342 5218 -3 - 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229903.peg.1064 CDS AZTZ01000230.1 6481 6888 1 + 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229903.peg.1065 CDS AZTZ01000230.1 7750 7001 -1 - 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229903.peg.1066 CDS AZTZ01000230.1 8585 7902 -2 - 684 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) - none -
fig|6666666.229903.peg.1067 CDS AZTZ01000230.1 8854 8588 -1 - 267 Carboxymuconolactone decarboxylase - none -
fig|6666666.229903.peg.1068 CDS AZTZ01000231.1 50 718 2 + 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229903.peg.1069 CDS AZTZ01000231.1 740 1519 2 + 780 UPF0246 protein YaaA - none -
fig|6666666.229903.peg.1070 CDS AZTZ01000231.1 1521 2087 3 + 567 FIG00696199: hypothetical protein - none -
fig|6666666.229903.peg.1071 CDS AZTZ01000232.1 324 31 -3 - 294 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.1072 CDS AZTZ01000232.1 727 308 -1 - 420 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229903.peg.1073 CDS AZTZ01000232.1 1645 818 -1 - 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229903.peg.1074 CDS AZTZ01000232.1 2523 1660 -3 - 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229903.peg.1075 CDS AZTZ01000232.1 3528 2602 -3 - 927 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229903.peg.1076 CDS AZTZ01000233.1 1348 86 -1 - 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine Biosynthesis;
YrdC-YciO-Sua5 protein family
fig|6666666.229903.peg.1077 CDS AZTZ01000234.1 9 152 3 + 144 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229903.peg.1078 CDS AZTZ01000234.1 163 750 1 + 588 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229903.peg.1079 CDS AZTZ01000234.1 867 1259 3 + 393 putative - none -
fig|6666666.229903.peg.1080 CDS AZTZ01000234.1 1271 2269 2 + 999 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229903.peg.1081 CDS AZTZ01000234.1 2365 2643 1 + 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229903.peg.1082 CDS AZTZ01000234.1 2653 2931 1 + 279 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229903.peg.1083 CDS AZTZ01000234.1 2940 4370 3 + 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229903.peg.1084 CDS AZTZ01000235.1 1087 137 -1 - 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229903.peg.1085 CDS AZTZ01000235.1 2039 1128 -2 - 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229903.peg.1086 CDS AZTZ01000235.1 2662 2036 -1 - 627 Outer membrane lipoprotein LolB precursor - none -
fig|6666666.229903.peg.1087 CDS AZTZ01000235.1 4000 2723 -1 - 1278 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229903.peg.1088 CDS AZTZ01000235.1 4611 4000 -3 - 612 SH3 domain protein - none -
fig|6666666.229903.peg.1089 CDS AZTZ01000235.1 5945 4680 -2 - 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229903.peg.1090 CDS AZTZ01000235.1 6420 5971 -3 - 450 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229903.peg.1091 CDS AZTZ01000236.1 34 396 1 + 363 membrane protein ykgB - none -
fig|6666666.229903.peg.1092 CDS AZTZ01000236.1 467 1348 2 + 882 Transcriptional regulator, AraC family - none -
fig|6666666.229903.peg.1093 CDS AZTZ01000236.1 1901 1353 -2 - 549 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229903.peg.1094 CDS AZTZ01000236.1 1982 2641 2 + 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229903.peg.1095 CDS AZTZ01000236.1 2654 3070 2 + 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1
fig|6666666.229903.peg.1096 CDS AZTZ01000236.1 3139 4011 1 + 873 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229903.peg.1097 CDS AZTZ01000236.1 4130 4246 2 + 117 hypothetical protein - none -
fig|6666666.229903.peg.1098 CDS AZTZ01000236.1 4422 4652 3 + 231 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229903.peg.1099 CDS AZTZ01000236.1 4656 5318 3 + 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229903.peg.1100 CDS AZTZ01000236.1 5356 6117 1 + 762 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229903.peg.1101 CDS AZTZ01000236.1 6139 7161 1 + 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229903.peg.1102 CDS AZTZ01000236.1 9402 7303 -3 - 2100 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229903.peg.1103 CDS AZTZ01000238.1 5 433 2 + 429 LSU ribosomal protein L13p (L13Ae) - none -
fig|6666666.229903.peg.1104 CDS AZTZ01000238.1 450 842 3 + 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229903.peg.1105 CDS AZTZ01000238.1 992 1777 2 + 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.229903.peg.1106 CDS AZTZ01000238.1 2082 1798 -3 - 285 StbE replicon stabilization toxin - none -
fig|6666666.229903.peg.1107 CDS AZTZ01000238.1 2333 2079 -2 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229903.peg.1108 CDS AZTZ01000238.1 3925 2468 -1 - 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229903.peg.1109 CDS AZTZ01000238.1 4149 3979 -3 - 171 hypothetical protein - none -
fig|6666666.229903.peg.1110 CDS AZTZ01000238.1 4151 4930 2 + 780 Protein of unknown function DUF419 - none -
fig|6666666.229903.peg.1111 CDS AZTZ01000238.1 5239 5063 -1 - 177 hypothetical protein - none -
fig|6666666.229903.peg.1112 CDS AZTZ01000238.1 7721 5232 -2 - 2490 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229903.peg.1113 CDS AZTZ01000238.1 8882 7782 -2 - 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229903.peg.1114 CDS AZTZ01000239.1 473 2227 2 + 1755 Putative sulfate permease - none -
fig|6666666.229903.peg.1115 CDS AZTZ01000241.1 2484 73 -3 - 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229903.peg.1116 CDS AZTZ01000241.1 3837 2503 -3 - 1335 Membrane-associated zinc metalloprotease - none -
fig|6666666.229903.peg.1117 CDS AZTZ01000241.1 4715 3846 -2 - 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) CBSS-316407.3.peg.1371;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.1118 CDS AZTZ01000241.1 5449 4730 -1 - 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229903.peg.1119 CDS AZTZ01000241.1 6754 5471 -1 - 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229903.peg.1120 CDS AZTZ01000241.1 7235 6783 -2 - 453 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229903.peg.1121 CDS AZTZ01000242.1 3068 795 -2 - 2274 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229903.peg.1122 CDS AZTZ01000243.1 106 1080 1 + 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229903.peg.1123 CDS AZTZ01000243.1 1082 1819 2 + 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229903.peg.1124 CDS AZTZ01000243.1 3981 1951 -3 - 2031 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229903.peg.1125 CDS AZTZ01000243.1 4701 4042 -3 - 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229903.peg.1126 CDS AZTZ01000243.1 5112 4819 -3 - 294 COG1872 - none -
fig|6666666.229903.peg.1127 CDS AZTZ01000243.1 5696 5136 -2 - 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229903.peg.1128 CDS AZTZ01000243.1 6659 5712 -2 - 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229903.peg.1129 CDS AZTZ01000243.1 8259 7381 -3 - 879 Orf2 - none -
fig|6666666.229903.peg.1130 CDS AZTZ01000243.1 11425 8327 -1 - 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229903.peg.1131 CDS AZTZ01000243.1 12635 11439 -2 - 1197 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229903.peg.1132 CDS AZTZ01000243.1 13140 12661 -3 - 480 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229903.peg.1133 CDS AZTZ01000244.1 1172 39 -2 - 1134 Autotransporter adhesin - none -
fig|6666666.229903.peg.1134 CDS AZTZ01000244.1 5178 1237 -3 - 3942 Autotransporter adhesin - none -
fig|6666666.229903.peg.1135 CDS AZTZ01000245.1 1392 13 -3 - 1380 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229903.peg.1136 CDS AZTZ01000245.1 2866 1400 -1 - 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229903.peg.1137 CDS AZTZ01000245.1 4707 2884 -3 - 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229903.peg.1138 CDS AZTZ01000245.1 4895 4725 -2 - 171 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229903.peg.1139 CDS AZTZ01000246.1 978 1571 3 + 594 hypothetical protein - none -
fig|6666666.229903.peg.1140 CDS AZTZ01000246.1 1978 1655 -1 - 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229903.peg.1141 CDS AZTZ01000246.1 2924 2061 -2 - 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229903.peg.1142 CDS AZTZ01000246.1 3646 2969 -1 - 678 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229903.peg.1143 CDS AZTZ01000246.1 3777 4460 3 + 684 Putative surface protein - none -
fig|6666666.229903.peg.1144 CDS AZTZ01000246.1 4447 4686 1 + 240 Putative surface protein - none -
fig|6666666.229903.peg.1145 CDS AZTZ01000247.1 20 424 2 + 405 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229903.peg.1146 CDS AZTZ01000247.1 464 1156 2 + 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229903.peg.1147 CDS AZTZ01000247.1 1162 1479 1 + 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229903.peg.1148 CDS AZTZ01000247.1 1865 1515 -2 - 351 FIG00782386: hypothetical protein - none -
fig|6666666.229903.peg.1149 CDS AZTZ01000247.1 4605 1933 -3 - 2673 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229903.peg.1150 CDS AZTZ01000247.1 5087 4773 -2 - 315 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229903.peg.1151 CDS AZTZ01000248.1 64 1278 1 + 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229903.peg.1152 CDS AZTZ01000248.1 2135 1404 -2 - 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229903.peg.1153 CDS AZTZ01000249.1 21 1790 3 + 1770 oligopeptide transporter - none -
fig|6666666.229903.peg.1154 CDS AZTZ01000249.1 1852 2280 1 + 429 hypothetical protein - none -
fig|6666666.229903.peg.1155 CDS AZTZ01000249.1 2318 3127 2 + 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229903.peg.1156 CDS AZTZ01000249.1 3209 4693 2 + 1485 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229903.peg.1157 CDS AZTZ01000250.1 1199 351 -2 - 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229903.peg.1158 CDS AZTZ01000250.1 2078 1356 -2 - 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229903.peg.1159 CDS AZTZ01000250.1 2490 2230 -3 - 261 hypothetical protein - none -
fig|6666666.229903.peg.1160 CDS AZTZ01000250.1 3371 2487 -2 - 885 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229903.peg.1161 CDS AZTZ01000250.1 4262 3399 -2 - 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229903.peg.1162 CDS AZTZ01000250.1 4380 5096 3 + 717 Ribonuclease PH (EC 2.7.7.56) tRNA processing
fig|6666666.229903.peg.1163 CDS AZTZ01000250.1 5106 5750 3 + 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229903.peg.1164 CDS AZTZ01000250.1 5832 6707 3 + 876 DnaJ-like protein DjlA - none -
fig|6666666.229903.peg.1165 CDS AZTZ01000250.1 6711 7715 3 + 1005 tRNA-dihydrouridine synthase C (EC 1.-.-.-) - none -
fig|6666666.229903.peg.1166 CDS AZTZ01000250.1 8759 7701 -2 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229903.peg.1167 CDS AZTZ01000250.1 10295 8775 -2 - 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229903.peg.1168 CDS AZTZ01000250.1 11384 10386 -2 - 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229903.peg.1169 CDS AZTZ01000251.1 70 1110 1 + 1041 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.229903.peg.1170 CDS AZTZ01000251.1 1115 1414 2 + 300 DNA-binding protein Fis - none -
fig|6666666.229903.peg.1171 CDS AZTZ01000252.1 651 511 -3 - 141 hypothetical protein - none -
fig|6666666.229903.peg.1172 CDS AZTZ01000252.1 895 755 -1 - 141 hypothetical protein - none -
fig|6666666.229903.peg.1173 CDS AZTZ01000254.1 448 299 -1 - 150 hypothetical protein - none -
fig|6666666.229903.peg.1174 CDS AZTZ01000254.1 1539 535 -3 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229903.peg.1175 CDS AZTZ01000254.1 1595 2044 2 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229903.peg.1176 CDS AZTZ01000254.1 2054 2497 2 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229903.peg.1177 CDS AZTZ01000254.1 5879 2499 -2 - 3381 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229903.peg.1178 CDS AZTZ01000254.1 6227 5925 -2 - 303 FIG00696353: hypothetical protein - none -
fig|6666666.229903.peg.1179 CDS AZTZ01000254.1 6867 6202 -3 - 666 FIG00696574: hypothetical protein - none -
fig|6666666.229903.peg.1180 CDS AZTZ01000254.1 7166 6894 -2 - 273 Type II secretory pathway, component PulJ - none -
fig|6666666.229903.peg.1181 CDS AZTZ01000255.1 1329 433 -3 - 897 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.229903.peg.1182 CDS AZTZ01000256.1 107 637 2 + 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229903.peg.1183 CDS AZTZ01000257.1 32 1177 2 + 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229903.peg.1184 CDS AZTZ01000258.1 11 253 2 + 243 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229903.peg.1185 CDS AZTZ01000258.1 269 952 2 + 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229903.peg.1186 CDS AZTZ01000259.1 128 2293 2 + 2166 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229903.peg.1187 CDS AZTZ01000259.1 3077 2403 -2 - 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229903.peg.1188 CDS AZTZ01000259.1 3615 3154 -3 - 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229903.peg.1189 CDS AZTZ01000259.1 5442 3670 -3 - 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229903.peg.1190 CDS AZTZ01000260.1 16 1404 1 + 1389 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229903.peg.1191 CDS AZTZ01000260.1 1397 2092 2 + 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229903.peg.1192 CDS AZTZ01000260.1 2977 2141 -1 - 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229903.peg.1193 CDS AZTZ01000260.1 4801 3290 -1 - 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229903.peg.1194 CDS AZTZ01000260.1 5940 4936 -3 - 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229903.peg.1195 CDS AZTZ01000260.1 6946 6053 -1 - 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229903.peg.1196 CDS AZTZ01000261.1 449 589 2 + 141 hypothetical protein - none -
fig|6666666.229903.peg.1197 CDS AZTZ01000262.1 791 336 -2 - 456 Mobile element protein - none -
fig|6666666.229903.peg.1198 CDS AZTZ01000262.1 2972 1623 -2 - 1350 Sodium-dependent transporter - none -
fig|6666666.229903.peg.1199 CDS AZTZ01000266.1 315 1232 3 + 918 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229903.peg.1200 CDS AZTZ01000266.1 3287 1311 -2 - 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229903.peg.1201 CDS AZTZ01000266.1 3513 4412 3 + 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229903.peg.1202 CDS AZTZ01000266.1 4472 5437 2 + 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229903.peg.1203 CDS AZTZ01000266.1 5445 6368 3 + 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229903.peg.1204 CDS AZTZ01000266.1 6380 7138 2 + 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229903.peg.1205 CDS AZTZ01000266.1 8790 7258 -3 - 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229903.peg.1206 CDS AZTZ01000267.1 1089 88 -3 - 1002 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229903.peg.1207 CDS AZTZ01000267.1 2920 1070 -1 - 1851 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229903.peg.1208 CDS AZTZ01000267.1 3250 2951 -1 - 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229903.peg.1209 CDS AZTZ01000267.1 3392 3532 2 + 141 hypothetical protein - none -
fig|6666666.229903.peg.1210 CDS AZTZ01000267.1 3981 3514 -3 - 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229903.peg.1211 CDS AZTZ01000267.1 4049 4810 2 + 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229903.peg.1212 CDS AZTZ01000268.1 6 137 3 + 132 hypothetical protein - none -
fig|6666666.229903.peg.1213 CDS AZTZ01000268.1 134 727 2 + 594 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) - none -
fig|6666666.229903.peg.1214 CDS AZTZ01000268.1 854 1018 2 + 165 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229903.peg.1215 CDS AZTZ01000268.1 1000 1554 1 + 555 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229903.peg.1216 CDS AZTZ01000268.1 1536 1673 3 + 138 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) - none -
fig|6666666.229903.peg.1217 CDS AZTZ01000269.1 13 1344 1 + 1332 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA processing
fig|6666666.229903.peg.1218 CDS AZTZ01000269.1 1970 1401 -2 - 570 Primosomal replication protein N@1@1 - none -
fig|6666666.229903.peg.1219 CDS AZTZ01000269.1 3392 2040 -2 - 1353 Histidine permease YuiF - none -
fig|6666666.229903.peg.1220 CDS AZTZ01000269.1 4072 3833 -1 - 240 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229903.peg.1221 CDS AZTZ01000271.1 38 688 2 + 651 COG1720: Uncharacterized conserved protein - none -
fig|6666666.229903.peg.1222 CDS AZTZ01000271.1 3446 744 -2 - 2703 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.1223 CDS AZTZ01000271.1 3402 3548 3 + 147 hypothetical protein - none -
fig|6666666.229903.peg.1224 CDS AZTZ01000272.1 692 462 -2 - 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229903.peg.1225 CDS AZTZ01000272.1 1031 705 -2 - 327 Primosomal replication protein N - none -
fig|6666666.229903.peg.1226 CDS AZTZ01000272.1 1395 1018 -3 - 378 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.229903.peg.1227 CDS AZTZ01000272.1 1557 1438 -3 - 120 hypothetical protein - none -
fig|6666666.229903.peg.1228 CDS AZTZ01000272.1 2171 1548 -2 - 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229903.peg.1229 CDS AZTZ01000273.1 949 113 -1 - 837 PTS system, mannose-specific IID component - none -
fig|6666666.229903.peg.1230 CDS AZTZ01000273.1 1760 963 -2 - 798 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229903.peg.1231 CDS AZTZ01000273.1 2755 1778 -1 - 978 PTS system, mannose-specific IIA component / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229903.peg.1232 CDS AZTZ01000273.1 3641 3057 -2 - 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229903.peg.1233 CDS AZTZ01000273.1 3657 5084 3 + 1428 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229903.peg.1234 CDS AZTZ01000274.1 4 756 1 + 753 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229903.peg.1235 CDS AZTZ01000275.1 45 293 3 + 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229903.peg.1236 CDS AZTZ01000275.1 365 246 -2 - 120 hypothetical protein - none -
fig|6666666.229903.peg.1237 CDS AZTZ01000275.1 1217 405 -2 - 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229903.peg.1238 CDS AZTZ01000275.1 1862 1239 -2 - 624 L-lysine permease - none -
fig|6666666.229903.peg.1239 CDS AZTZ01000275.1 2362 1862 -1 - 501 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229903.peg.1240 CDS AZTZ01000275.1 3355 2372 -1 - 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229903.peg.1241 CDS AZTZ01000275.1 3799 3374 -1 - 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229903.peg.1242 CDS AZTZ01000275.1 4279 3806 -1 - 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229903.peg.1243 CDS AZTZ01000276.1 256 1023 1 + 768 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229903.peg.1244 CDS AZTZ01000276.1 1033 2232 1 + 1200 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229903.peg.1245 CDS AZTZ01000276.1 2229 3035 3 + 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229903.peg.1246 CDS AZTZ01000277.1 86 895 2 + 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229903.peg.1247 CDS AZTZ01000277.1 906 1424 3 + 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229903.peg.1248 CDS AZTZ01000277.1 1421 1861 2 + 441 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229903.peg.1249 CDS AZTZ01000277.1 1945 2337 1 + 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229903.peg.1250 CDS AZTZ01000277.1 2358 3722 3 + 1365 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229903.peg.1251 CDS AZTZ01000278.1 1383 103 -3 - 1281 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229903.peg.1252 CDS AZTZ01000279.1 6 581 3 + 576 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229903.peg.1253 CDS AZTZ01000279.1 1770 658 -3 - 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229903.peg.1254 CDS AZTZ01000280.1 48 683 3 + 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229903.peg.1255 CDS AZTZ01000281.1 160 657 1 + 498 putative adhesin/invasin - none -
fig|6666666.229903.peg.1256 CDS AZTZ01000281.1 2472 760 -3 - 1713 ABC transporter ATP-binding protein - none -
fig|6666666.229903.peg.1257 CDS AZTZ01000282.1 1404 103 -3 - 1302 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229903.peg.1258 CDS AZTZ01000282.1 2027 1431 -2 - 597 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229903.peg.1259 CDS AZTZ01000283.1 197 1570 2 + 1374 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229903.peg.1260 CDS AZTZ01000283.1 1831 1718 -1 - 114 hypothetical protein - none -
fig|6666666.229903.peg.1261 CDS AZTZ01000285.1 294 923 3 + 630 hypothetical protein - none -
fig|6666666.229903.peg.1262 CDS AZTZ01000285.1 1325 2455 2 + 1131 Permeases of the major facilitator superfamily - none -
fig|6666666.229903.peg.1263 CDS AZTZ01000286.1 31 846 1 + 816 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229903.peg.1264 CDS AZTZ01000286.1 851 2044 2 + 1194 Bicyclomycin resistance protein - none -
fig|6666666.229903.peg.1265 CDS AZTZ01000286.1 2216 2851 2 + 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229903.peg.1266 CDS AZTZ01000286.1 2856 3521 3 + 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229903.peg.1267 CDS AZTZ01000286.1 3532 4269 1 + 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229903.peg.1268 CDS AZTZ01000286.1 4287 4493 3 + 207 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229903.peg.1269 CDS AZTZ01000286.1 4490 5008 2 + 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229903.peg.1270 CDS AZTZ01000286.1 5008 6966 1 + 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229903.peg.1271 CDS AZTZ01000286.1 6995 7540 2 + 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229903.peg.1272 CDS AZTZ01000286.1 7639 8088 1 + 450 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229903.peg.1273 CDS AZTZ01000286.1 8088 9011 3 + 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229903.peg.1274 CDS AZTZ01000287.1 107 1630 2 + 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229903.peg.1275 CDS AZTZ01000287.1 1653 2357 3 + 705 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229903.peg.1276 CDS AZTZ01000287.1 2354 3031 2 + 678 NrfC protein - none -
fig|6666666.229903.peg.1277 CDS AZTZ01000287.1 3028 3993 1 + 966 NrfD protein - none -
fig|6666666.229903.peg.1278 CDS AZTZ01000289.1 26 805 2 + 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229903.peg.1279 CDS AZTZ01000289.1 2876 945 -2 - 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229903.peg.1280 CDS AZTZ01000290.1 276 698 3 + 423 Aldo-keto reductase - none -
fig|6666666.229903.peg.1281 CDS AZTZ01000290.1 737 1411 2 + 675 Aldo-keto reductase - none -
fig|6666666.229903.peg.1282 CDS AZTZ01000290.1 1464 2444 3 + 981 Aldo-keto reductase - none -
fig|6666666.229903.peg.1283 CDS AZTZ01000291.1 135 452 3 + 318 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229903.peg.1284 CDS AZTZ01000291.1 1267 479 -1 - 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229903.peg.1285 CDS AZTZ01000291.1 1409 1254 -2 - 156 hypothetical protein - none -
fig|6666666.229903.peg.1286 CDS AZTZ01000292.1 1325 111 -2 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229903.peg.1287 CDS AZTZ01000292.1 2512 1487 -1 - 1026 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229903.peg.1288 CDS AZTZ01000294.1 94 342 1 + 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229903.peg.1289 CDS AZTZ01000294.1 368 895 2 + 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229903.peg.1290 CDS AZTZ01000294.1 952 1701 1 + 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229903.peg.1291 CDS AZTZ01000294.1 1727 2077 2 + 351 LSU ribosomal protein L19p - none -
fig|6666666.229903.peg.1292 CDS AZTZ01000294.1 2675 2187 -2 - 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229903.peg.1293 CDS AZTZ01000294.1 3748 2675 -1 - 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229903.peg.1294 CDS AZTZ01000294.1 4873 3818 -1 - 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229903.peg.1295 CDS AZTZ01000295.1 79 1353 1 + 1275 Na+/H+ antiporter - none -
fig|6666666.229903.peg.1296 CDS AZTZ01000296.1 57 857 3 + 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229903.peg.1297 CDS AZTZ01000296.1 2661 910 -3 - 1752 unknown - none -
fig|6666666.229903.peg.1298 CDS AZTZ01000297.1 956 66 -2 - 891 hypothetical protein - none -
fig|6666666.229903.peg.1299 CDS AZTZ01000297.1 3004 959 -1 - 2046 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229903.peg.1300 CDS AZTZ01000297.1 3648 3037 -3 - 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229903.peg.1301 CDS AZTZ01000297.1 4626 3670 -3 - 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229903.peg.1302 CDS AZTZ01000297.1 5717 4950 -2 - 768 Putative membrane protein YfcA - none -
fig|6666666.229903.peg.1303 CDS AZTZ01000297.1 6593 5721 -2 - 873 Murein endopeptidase - none -
fig|6666666.229903.peg.1304 CDS AZTZ01000297.1 7688 6615 -2 - 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229903.peg.1305 CDS AZTZ01000298.1 1282 167 -1 - 1116 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229903.peg.1306 CDS AZTZ01000298.1 1463 2176 2 + 714 SanA protein - none -
fig|6666666.229903.peg.1307 CDS AZTZ01000298.1 3146 2160 -2 - 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229903.peg.1308 CDS AZTZ01000299.1 90 1094 3 + 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229903.peg.1309 CDS AZTZ01000299.1 1825 1181 -1 - 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229903.peg.1310 CDS AZTZ01000299.1 2059 1853 -1 - 207 hypothetical protein - none -
fig|6666666.229903.peg.1311 CDS AZTZ01000300.1 992 108 -2 - 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Ribosome biogenesis bacterial
fig|6666666.229903.peg.1312 CDS AZTZ01000300.1 1547 1005 -2 - 543 Protein involved in cell division - none -
fig|6666666.229903.peg.1313 CDS AZTZ01000300.1 3002 1566 -2 - 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229903.peg.1314 CDS AZTZ01000300.1 3271 2999 -1 - 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229903.peg.1315 CDS AZTZ01000300.1 4683 3295 -3 - 1389 FOG: TPR repeat - none -
fig|6666666.229903.peg.1316 CDS AZTZ01000301.1 1313 42 -2 - 1272 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229903.peg.1317 CDS AZTZ01000301.1 1587 1330 -3 - 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229903.peg.1318 CDS AZTZ01000301.1 1856 1587 -2 - 270 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229903.peg.1319 CDS AZTZ01000301.1 2591 1950 -2 - 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229903.peg.1320 CDS AZTZ01000301.1 3129 2620 -3 - 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229903.peg.1321 CDS AZTZ01000301.1 3937 3152 -1 - 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229903.peg.1322 CDS AZTZ01000301.1 4728 3931 -3 - 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229903.peg.1323 CDS AZTZ01000302.1 1211 141 -2 - 1071 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229903.peg.1324 CDS AZTZ01000302.1 1310 1435 2 + 126 hypothetical protein - none -
fig|6666666.229903.peg.1325 CDS AZTZ01000302.1 2525 1446 -2 - 1080 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism
fig|6666666.229903.peg.1326 CDS AZTZ01000303.1 35 1321 2 + 1287 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229903.peg.1327 CDS AZTZ01000303.1 1495 3669 1 + 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229903.peg.1328 CDS AZTZ01000303.1 4629 3802 -3 - 828 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229903.peg.1329 CDS AZTZ01000303.1 4833 4672 -3 - 162 hypothetical protein - none -
fig|6666666.229903.peg.1330 CDS AZTZ01000303.1 5549 4806 -2 - 744 Probable transmembrane protein - none -
fig|6666666.229903.peg.1331 CDS AZTZ01000303.1 5816 5562 -2 - 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229903.peg.1332 CDS AZTZ01000303.1 6064 5813 -1 - 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229903.peg.1333 CDS AZTZ01000303.1 7129 6173 -1 - 957 Polysaccharide polymerization protein - none -
fig|6666666.229903.peg.1334 CDS AZTZ01000303.1 8649 7126 -3 - 1524 putative flippase - none -
fig|6666666.229903.peg.1335 CDS AZTZ01000303.1 8780 9556 2 + 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229903.peg.1336 CDS AZTZ01000303.1 9565 10758 1 + 1194 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229903.peg.1337 CDS AZTZ01000303.1 10758 11639 3 + 882 Glycosyltransferase - none -
fig|6666666.229903.peg.1338 CDS AZTZ01000304.1 54 257 3 + 204 ATPase component BioM of energizing module of biotin ECF transporter ECF class transporters
fig|6666666.229903.peg.1339 CDS AZTZ01000304.1 1295 342 -2 - 954 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.1340 CDS AZTZ01000305.1 2583 892 -3 - 1692 Peptide transport periplasmic protein sapA (TC 3.A.1.5.5) - none -
fig|6666666.229903.peg.1341 CDS AZTZ01000305.1 2799 4205 3 + 1407 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229903.peg.1342 CDS AZTZ01000305.1 4219 5298 1 + 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229903.peg.1343 CDS AZTZ01000305.1 5375 6334 2 + 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229903.peg.1344 CDS AZTZ01000305.1 6674 6525 -2 - 150 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229903.peg.1345 CDS AZTZ01000305.1 6859 6689 -1 - 171 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229903.peg.1346 CDS AZTZ01000306.1 2479 1301 -1 - 1179 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229903.peg.1347 CDS AZTZ01000307.1 58 1701 1 + 1644 FIG00362583: hypothetical protein - none -
fig|6666666.229903.peg.1348 CDS AZTZ01000307.1 2505 1780 -3 - 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNAmodification position 34
fig|6666666.229903.peg.1349 CDS AZTZ01000308.1 23 322 2 + 300 Colicin V production protein - none -
fig|6666666.229903.peg.1350 CDS AZTZ01000308.1 395 514 2 + 120 hypothetical protein - none -
fig|6666666.229903.peg.1351 CDS AZTZ01000308.1 2547 472 -3 - 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229903.peg.1352 CDS AZTZ01000308.1 5083 2693 -1 - 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229903.peg.1353 CDS AZTZ01000308.1 5256 7970 3 + 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229903.peg.1354 CDS AZTZ01000310.1 4 699 1 + 696 probable periplasmic protein NMA1059 - none -
fig|6666666.229903.peg.1355 CDS AZTZ01000310.1 793 1401 1 + 609 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229903.peg.1356 CDS AZTZ01000310.1 1690 1472 -1 - 219 hypothetical protein - none -
fig|6666666.229903.peg.1357 CDS AZTZ01000310.1 2219 1815 -2 - 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229903.peg.1358 CDS AZTZ01000311.1 156 977 3 + 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) - none -
fig|6666666.229903.peg.1359 CDS AZTZ01000311.1 980 2224 2 + 1245 FIG00641944: hypothetical protein - none -
fig|6666666.229903.peg.1360 CDS AZTZ01000311.1 2221 2853 1 + 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229903.peg.1361 CDS AZTZ01000311.1 2856 3632 3 + 777 Hydroxypyruvate isomerase (EC 5.3.1.22) - none -
fig|6666666.229903.peg.1362 CDS AZTZ01000312.1 8 574 2 + 567 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229903.peg.1363 CDS AZTZ01000313.1 71 2089 2 + 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNAmodification position 34
fig|6666666.229903.peg.1364 CDS AZTZ01000314.1 49 576 1 + 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229903.peg.1365 CDS AZTZ01000314.1 603 1691 3 + 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229903.peg.1366 CDS AZTZ01000314.1 1694 2548 2 + 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229903.peg.1367 CDS AZTZ01000315.1 1261 116 -1 - 1146 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNAmodification position 34
fig|6666666.229903.peg.1368 CDS AZTZ01000316.1 162 2015 3 + 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229903.peg.1369 CDS AZTZ01000318.1 1928 102 -2 - 1827 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229903.peg.1370 CDS AZTZ01000319.1 1199 165 -2 - 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229903.peg.1371 CDS AZTZ01000319.1 1702 1199 -1 - 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
Lipopolysaccharide assembly
fig|6666666.229903.peg.1372 CDS AZTZ01000319.1 1691 1819 2 + 129 hypothetical protein - none -
fig|6666666.229903.peg.1373 CDS AZTZ01000319.1 3988 1844 -1 - 2145 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229903.peg.1374 CDS AZTZ01000322.1 234 118 -3 - 117 hypothetical protein - none -
fig|6666666.229903.peg.1375 CDS AZTZ01000322.1 229 2415 1 + 2187 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229903.peg.1376 CDS AZTZ01000323.1 58 1029 1 + 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229903.peg.1377 CDS AZTZ01000324.1 53 1975 2 + 1923 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229903.peg.1378 CDS AZTZ01000324.1 1977 4058 3 + 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229903.peg.1379 CDS AZTZ01000324.1 4051 4548 1 + 498 Chorismate--pyruvate lyase (EC 4.1.3.40) - none -
fig|6666666.229903.peg.1380 CDS AZTZ01000324.1 4579 5406 1 + 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229903.peg.1381 CDS AZTZ01000325.1 1791 1252 -3 - 540 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229903.peg.1382 CDS AZTZ01000326.1 81 938 3 + 858 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229903.peg.1383 CDS AZTZ01000326.1 3059 1167 -2 - 1893 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNAmodification position 34
fig|6666666.229903.peg.1384 CDS AZTZ01000327.1 18 752 3 + 735 Phosphoglycerate transport regulatory protein PgtC - none -
fig|6666666.229903.peg.1385 CDS AZTZ01000327.1 886 1266 1 + 381 Phosphoglycerate transport regulatory protein PgtC - none -
fig|6666666.229903.peg.1386 CDS AZTZ01000328.1 155 340 2 + 186 Transposase - none -
fig|6666666.229903.peg.1387 CDS AZTZ01000329.1 13 1647 1 + 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229903.peg.1388 CDS AZTZ01000330.1 87 2357 3 + 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229903.peg.1389 CDS AZTZ01000331.1 201 1592 3 + 1392 Chloride channel protein - none -
fig|6666666.229903.peg.1390 CDS AZTZ01000331.1 1595 2581 2 + 987 tRNA dihydrouridine synthase A - none -
fig|6666666.229903.peg.1391 CDS AZTZ01000331.1 3344 2637 -2 - 708 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229903.peg.1392 CDS AZTZ01000332.1 103 357 1 + 255 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229903.peg.1393 CDS AZTZ01000332.1 357 1301 3 + 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229903.peg.1394 CDS AZTZ01000333.1 1596 814 -3 - 783 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229903.peg.1395 CDS AZTZ01000333.1 1705 2019 1 + 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229903.peg.1396 CDS AZTZ01000334.1 105 2369 3 + 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229903.peg.1397 CDS AZTZ01000334.1 2513 3157 2 + 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229903.peg.1398 CDS AZTZ01000336.1 419 1267 2 + 849 Cytosine-specific DNA methyltransferase (EC 2.1.1.37) - none -
fig|6666666.229903.peg.1399 CDS AZTZ01000336.1 1279 1983 1 + 705 putative membrane protein - none -
fig|6666666.229903.peg.1400 CDS AZTZ01000337.1 1138 494 -1 - 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229903.peg.1401 CDS AZTZ01000337.1 1274 1149 -2 - 126 hypothetical protein - none -
fig|6666666.229903.peg.1402 CDS AZTZ01000337.1 2566 1271 -1 - 1296 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229903.peg.1403 CDS AZTZ01000337.1 2914 2573 -1 - 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229903.peg.1404 CDS AZTZ01000337.1 3936 2920 -3 - 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229903.peg.1405 CDS AZTZ01000338.1 11 355 2 + 345 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229903.peg.1406 CDS AZTZ01000339.1 112 1242 1 + 1131 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229903.peg.1407 CDS AZTZ01000340.1 39 626 3 + 588 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229903.peg.1408 CDS AZTZ01000340.1 590 1339 2 + 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229903.peg.1409 CDS AZTZ01000341.1 377 177 -2 - 201 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) - none -
fig|6666666.229903.peg.1410 CDS AZTZ01000341.1 605 411 -2 - 195 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) - none -
fig|6666666.229903.peg.1411 CDS AZTZ01000341.1 972 739 -3 - 234 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) - none -
fig|6666666.229903.peg.1412 CDS AZTZ01000341.1 1246 1109 -1 - 138 ATP phosphoribosyltransferase (EC 2.4.2.17) Riboflavin synthesis cluster
fig|6666666.229903.peg.1413 CDS AZTZ01000341.1 1709 1224 -2 - 486 ATP phosphoribosyltransferase (EC 2.4.2.17) Riboflavin synthesis cluster
fig|6666666.229903.peg.1414 CDS AZTZ01000342.1 106 1488 1 + 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229903.peg.1415 CDS AZTZ01000343.1 816 124 -3 - 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Polyamine Metabolism
fig|6666666.229903.peg.1416 CDS AZTZ01000343.1 1480 833 -1 - 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229903.peg.1417 CDS AZTZ01000343.1 3234 1513 -3 - 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229903.peg.1418 CDS AZTZ01000343.1 3930 3247 -3 - 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229903.peg.1419 CDS AZTZ01000343.1 3989 4177 2 + 189 hypothetical protein - none -
fig|6666666.229903.peg.1420 CDS AZTZ01000343.1 4191 5198 3 + 1008 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229903.peg.1421 CDS AZTZ01000343.1 5409 6917 3 + 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229903.peg.1422 CDS AZTZ01000343.1 7183 7533 1 + 351 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis
fig|6666666.229903.peg.1423 CDS AZTZ01000343.1 7494 8168 3 + 675 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis
fig|6666666.229903.peg.1424 CDS AZTZ01000344.1 13 747 1 + 735 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229903.peg.1425 CDS AZTZ01000344.1 778 1968 1 + 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229903.peg.1426 CDS AZTZ01000344.1 2042 2341 2 + 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229903.peg.1427 CDS AZTZ01000344.1 2387 3025 2 + 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229903.peg.1428 CDS AZTZ01000344.1 3089 4051 2 + 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229903.peg.1429 CDS AZTZ01000344.1 5609 4200 -2 - 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229903.peg.1430 CDS AZTZ01000344.1 5679 6191 3 + 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229903.peg.1431 CDS AZTZ01000344.1 6282 6437 3 + 156 hypothetical protein - none -
fig|6666666.229903.peg.1432 CDS AZTZ01000345.1 56 1147 2 + 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229903.peg.1433 CDS AZTZ01000346.1 1103 159 -2 - 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA processing
fig|6666666.229903.peg.1434 CDS AZTZ01000346.1 2969 1107 -2 - 1863 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229903.peg.1435 CDS AZTZ01000346.1 4453 2969 -1 - 1485 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229903.peg.1436 CDS AZTZ01000346.1 4944 4450 -3 - 495 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229903.peg.1437 CDS AZTZ01000347.1 356 90 -2 - 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229903.peg.1438 CDS AZTZ01000347.1 1051 413 -1 - 639 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229903.peg.1439 CDS AZTZ01000347.1 1292 2296 2 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229903.peg.1440 CDS AZTZ01000347.1 2807 2391 -2 - 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229903.peg.1441 CDS AZTZ01000348.1 1119 76 -3 - 1044 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) D-Tagatose and Galactitol Utilization
fig|6666666.229903.peg.1442 CDS AZTZ01000348.1 1477 1142 -1 - 336 PTS system, galactitol-specific IIC component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229903.peg.1443 CDS AZTZ01000348.1 2487 1468 -3 - 1020 PTS system, galactitol-specific IIC component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229903.peg.1444 CDS AZTZ01000348.1 2777 2493 -2 - 285 PTS system, galactitol-specific IIB component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229903.peg.1445 CDS AZTZ01000348.1 3245 2796 -2 - 450 PTS system, galactitol-specific IIA component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229903.peg.1446 CDS AZTZ01000348.1 4515 3223 -3 - 1293 Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144) D-Tagatose and Galactitol Utilization
fig|6666666.229903.peg.1447 CDS AZTZ01000348.1 5482 4529 -1 - 954 Tagatose 1,6-bisphosphate aldolase (EC 4.1.2.40) - none -
fig|6666666.229903.peg.1448 CDS AZTZ01000349.1 207 2159 3 + 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229903.peg.1449 CDS AZTZ01000349.1 2314 2721 1 + 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229903.peg.1450 CDS AZTZ01000350.1 1973 240 -2 - 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229903.peg.1451 CDS AZTZ01000351.1 140 955 2 + 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229903.peg.1452 CDS AZTZ01000351.1 1938 1045 -3 - 894 Transcriptional regulator, LysR family - none -
fig|6666666.229903.peg.1453 CDS AZTZ01000351.1 2238 3083 3 + 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229903.peg.1454 CDS AZTZ01000351.1 3290 3616 2 + 327 FIG022160: hypothetical toxin - none -
fig|6666666.229903.peg.1455 CDS AZTZ01000351.1 3609 3893 3 + 285 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229903.peg.1456 CDS AZTZ01000353.1 566 243 -2 - 324 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229903.peg.1457 CDS AZTZ01000354.1 1176 157 -3 - 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229903.peg.1458 CDS AZTZ01000355.1 416 249 -2 - 168 hypothetical protein - none -
fig|6666666.229903.peg.1459 CDS AZTZ01000357.1 7 462 1 + 456 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229903.peg.1460 CDS AZTZ01000357.1 495 797 3 + 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229903.peg.1461 CDS AZTZ01000357.1 2310 904 -3 - 1407 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229903.peg.1462 CDS AZTZ01000358.1 823 143 -1 - 681 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229903.peg.1463 CDS AZTZ01000358.1 1545 820 -3 - 726 Membrane protein LAPB - none -
fig|6666666.229903.peg.1464 CDS AZTZ01000359.1 93 797 3 + 705 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein CBSS-203122.12.peg.188;
CBSS-203122.12.peg.188
fig|6666666.229903.peg.1465 CDS AZTZ01000359.1 1636 809 -1 - 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229903.peg.1466 CDS AZTZ01000359.1 2892 1633 -3 - 1260 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229903.peg.1467 CDS AZTZ01000361.1 647 36 -2 - 612 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229903.peg.1468 CDS AZTZ01000361.1 1250 804 -2 - 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229903.peg.1469 CDS AZTZ01000361.1 1724 1254 -2 - 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229903.peg.1470 CDS AZTZ01000362.1 532 32 -1 - 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229903.peg.1471 CDS AZTZ01000362.1 1849 593 -1 - 1257 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229903.peg.1472 CDS AZTZ01000363.1 61 402 1 + 342 Biotin synthesis protein BioC Biotin biosynthesis Experimental
fig|6666666.229903.peg.1473 CDS AZTZ01000363.1 559 1026 1 + 468 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229903.peg.1474 CDS AZTZ01000363.1 1043 1213 2 + 171 LSU ribosomal protein L32p - none -
fig|6666666.229903.peg.1475 CDS AZTZ01000365.1 224 3 -2 - 222 HipA protein Persister Cells
fig|6666666.229903.peg.1476 CDS AZTZ01000365.1 584 279 -2 - 306 HipA protein Persister Cells
fig|6666666.229903.peg.1477 CDS AZTZ01000365.1 937 818 -1 - 120 HipA protein Persister Cells
fig|6666666.229903.peg.1478 CDS AZTZ01000365.1 997 1110 1 + 114 hypothetical protein - none -
fig|6666666.229903.peg.1479 CDS AZTZ01000366.1 53 487 2 + 435 Mlr7403 protein CBSS-290633.1.peg.1906
fig|6666666.229903.peg.1480 CDS AZTZ01000366.1 541 993 1 + 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229903.peg.1481 CDS AZTZ01000366.1 1703 999 -2 - 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229903.peg.1482 CDS AZTZ01000366.1 1816 1700 -1 - 117 hypothetical protein - none -
fig|6666666.229903.peg.1483 CDS AZTZ01000366.1 3076 1823 -1 - 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229903.peg.1484 CDS AZTZ01000366.1 3826 3200 -1 - 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229903.peg.1485 CDS AZTZ01000366.1 5810 3963 -2 - 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229903.peg.1486 CDS AZTZ01000368.1 102 1442 3 + 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.1487 CDS AZTZ01000368.1 1445 2680 2 + 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.1488 CDS AZTZ01000368.1 2673 3458 3 + 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.1489 CDS AZTZ01000368.1 3458 4087 2 + 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.1490 CDS AZTZ01000368.1 4091 4687 2 + 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.1491 CDS AZTZ01000368.1 4699 5934 1 + 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.1492 CDS AZTZ01000368.1 6030 5914 -3 - 117 hypothetical protein - none -
fig|6666666.229903.peg.1493 CDS AZTZ01000368.1 6084 7172 3 + 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229903.peg.1494 CDS AZTZ01000368.1 7251 7508 3 + 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229903.peg.1495 CDS AZTZ01000369.1 56 1009 2 + 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229903.peg.1496 CDS AZTZ01000369.1 1028 1141 2 + 114 hypothetical protein - none -
fig|6666666.229903.peg.1497 CDS AZTZ01000369.1 1141 3138 1 + 1998 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229903.peg.1498 CDS AZTZ01000369.1 3599 3210 -2 - 390 Endoribonuclease L-PSP - none -
fig|6666666.229903.peg.1499 CDS AZTZ01000369.1 4108 3677 -1 - 432 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229903.peg.1500 CDS AZTZ01000369.1 5272 4214 -1 - 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229903.peg.1501 CDS AZTZ01000371.1 3 776 3 + 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229903.peg.1502 CDS AZTZ01000371.1 789 1574 3 + 786 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229903.peg.1503 CDS AZTZ01000372.1 223 110 -1 - 114 hypothetical protein - none -
fig|6666666.229903.peg.1504 CDS AZTZ01000372.1 1718 261 -2 - 1458 Thiamine biosynthesis protein thiI - none -
fig|6666666.229903.peg.1505 CDS AZTZ01000373.1 21 218 3 + 198 Outer membrane protein W precursor - none -
fig|6666666.229903.peg.1506 CDS AZTZ01000373.1 1960 281 -1 - 1680 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229903.peg.1507 CDS AZTZ01000373.1 2951 2034 -2 - 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229903.peg.1508 CDS AZTZ01000373.1 3124 2996 -1 - 129 hypothetical protein - none -
fig|6666666.229903.peg.1509 CDS AZTZ01000373.1 3092 3670 2 + 579 Heat shock protein GrpE GroEL GroES;
Protein chaperones
fig|6666666.229903.peg.1510 CDS AZTZ01000375.1 29 694 2 + 666 putative exported protein - none -
fig|6666666.229903.peg.1511 CDS AZTZ01000375.1 710 1744 2 + 1035 putative membrane protein - none -
fig|6666666.229903.peg.1512 CDS AZTZ01000377.1 135 10 -3 - 126 hypothetical protein - none -
fig|6666666.229903.peg.1513 CDS AZTZ01000377.1 1322 132 -2 - 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229903.peg.1514 CDS AZTZ01000378.1 60 680 3 + 621 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229903.peg.1515 CDS AZTZ01000379.1 37 534 1 + 498 FIG00697418: hypothetical protein - none -
fig|6666666.229903.peg.1516 CDS AZTZ01000379.1 536 1252 2 + 717 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229903.peg.1517 CDS AZTZ01000379.1 1245 1601 3 + 357 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229903.peg.1518 CDS AZTZ01000379.1 1614 2159 3 + 546 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229903.peg.1519 CDS AZTZ01000379.1 2664 2248 -3 - 417 putative membrane protein - none -
fig|6666666.229903.peg.1520 CDS AZTZ01000380.1 141 704 3 + 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229903.peg.1521 CDS AZTZ01000382.1 71 187 2 + 117 hypothetical protein - none -
fig|6666666.229903.peg.1522 CDS AZTZ01000382.1 190 945 1 + 756 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229903.peg.1523 CDS AZTZ01000384.1 34 642 1 + 609 lipoprotein HlpB - none -
fig|6666666.229903.peg.1524 CDS AZTZ01000384.1 789 1670 3 + 882 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229903.peg.1525 CDS AZTZ01000385.1 285 1325 3 + 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229903.peg.1526 CDS AZTZ01000386.1 1633 104 -1 - 1530 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229903.peg.1527 CDS AZTZ01000387.1 1304 792 -2 - 513 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229903.peg.1528 CDS AZTZ01000389.1 43 2169 1 + 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229903.peg.1529 CDS AZTZ01000390.1 857 15 -2 - 843 Probable protease htpX homolog - none -
fig|6666666.229903.peg.1530 CDS AZTZ01000391.1 251 733 2 + 483 tmRNA-binding protein SmpB Translation termination factors bacterial
fig|6666666.229903.peg.1531 CDS AZTZ01000391.1 685 804 1 + 120 hypothetical protein - none -
fig|6666666.229903.peg.1532 CDS AZTZ01000391.1 1976 801 -2 - 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229903.peg.1533 CDS AZTZ01000391.1 2930 2013 -2 - 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229903.peg.1534 CDS AZTZ01000391.1 3942 2998 -3 - 945 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229903.peg.1535 CDS AZTZ01000391.1 4271 4014 -2 - 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868
fig|6666666.229903.peg.1536 CDS AZTZ01000391.1 4426 4292 -1 - 135 LSU ribosomal protein L21p CBSS-176279.3.peg.868
fig|6666666.229903.peg.1537 CDS AZTZ01000392.1 86 733 2 + 648 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229903.peg.1538 CDS AZTZ01000392.1 745 1155 1 + 411 excinuclease ABC subunit A - none -
fig|6666666.229903.peg.1539 CDS AZTZ01000392.1 1211 1783 2 + 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229903.peg.1540 CDS AZTZ01000392.1 1847 2461 2 + 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229903.peg.1541 CDS AZTZ01000392.1 2476 3489 1 + 1014 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229903.peg.1542 CDS AZTZ01000392.1 3828 3544 -3 - 285 Chromosome segregation ATPases - none -
fig|6666666.229903.peg.1543 CDS AZTZ01000394.1 128 919 2 + 792 putative lipoprotein - none -
fig|6666666.229903.peg.1544 CDS AZTZ01000394.1 1247 1122 -2 - 126 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229903.peg.1545 CDS AZTZ01000394.1 1945 1220 -1 - 726 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229903.peg.1546 CDS AZTZ01000395.1 199 1050 1 + 852 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229903.peg.1547 CDS AZTZ01000395.1 2315 1107 -2 - 1209 Sodium/glutamate symport protein - none -
fig|6666666.229903.peg.1548 CDS AZTZ01000397.1 39 1232 3 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229903.peg.1549 CDS AZTZ01000397.1 1237 2571 1 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229903.peg.1550 CDS AZTZ01000397.1 3431 2577 -2 - 855 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.229903.peg.1551 CDS AZTZ01000397.1 3993 3460 -3 - 534 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229903.peg.1552 CDS AZTZ01000397.1 4722 3997 -3 - 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB Lipopolysaccharide assembly
fig|6666666.229903.peg.1553 CDS AZTZ01000397.1 5246 4728 -2 - 519 LptA, protein essential for LPS transport across the periplasm Lipopolysaccharide assembly
fig|6666666.229903.peg.1554 CDS AZTZ01000397.1 5802 5227 -3 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229903.peg.1555 CDS AZTZ01000399.1 388 224 -1 - 165 Mobile element protein - none -
fig|6666666.229903.peg.1556 CDS AZTZ01000400.1 233 1066 2 + 834 Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like - none -
fig|6666666.229903.peg.1557 CDS AZTZ01000400.1 1072 2448 1 + 1377 Replicative DNA helicase (EC 3.6.1.-) in PFGI-1-like cluster - none -
fig|6666666.229903.peg.1558 CDS AZTZ01000400.1 2514 3407 3 + 894 FIG141751: hypothetical protein in PFGI-1-like cluster - none -
fig|6666666.229903.peg.1559 CDS AZTZ01000400.1 3628 4326 1 + 699 FIG141694: hypothetical protein in PFGI-1-like cluster - none -
fig|6666666.229903.peg.1560 CDS AZTZ01000401.1 197 976 2 + 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229903.peg.1561 CDS AZTZ01000401.1 1141 2538 1 + 1398 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229903.peg.1562 CDS AZTZ01000401.1 3201 2605 -3 - 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229903.peg.1563 CDS AZTZ01000401.1 3323 3210 -2 - 114 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229903.peg.1564 CDS AZTZ01000402.1 307 98 -1 - 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229903.peg.1565 CDS AZTZ01000402.1 1424 390 -2 - 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229903.peg.1566 CDS AZTZ01000402.1 2228 1437 -2 - 792 Glutathione synthetase (EC 6.3.2.3) Cluster containing Glutathione synthetase;
Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229903.peg.1567 CDS AZTZ01000402.1 3214 2228 -1 - 987 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229903.peg.1568 CDS AZTZ01000403.1 30 707 3 + 678 PTS system, mannose-specific IIC component - none -
fig|6666666.229903.peg.1569 CDS AZTZ01000403.1 815 1558 2 + 744 PTS system, mannose-specific IID component - none -
fig|6666666.229903.peg.1570 CDS AZTZ01000403.1 1957 1739 -1 - 219 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.1571 CDS AZTZ01000403.1 2693 1938 -2 - 756 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.1572 CDS AZTZ01000403.1 3339 2701 -3 - 639 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.1573 CDS AZTZ01000403.1 3572 3441 -2 - 132 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.1574 CDS AZTZ01000405.1 1345 95 -1 - 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229903.peg.1575 CDS AZTZ01000405.1 2031 1345 -3 - 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229903.peg.1576 CDS AZTZ01000405.1 3231 2047 -3 - 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229903.peg.1577 CDS AZTZ01000405.1 3939 3610 -3 - 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229903.peg.1578 CDS AZTZ01000406.1 1864 110 -1 - 1755 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229903.peg.1579 CDS AZTZ01000407.1 287 168 -2 - 120 hypothetical protein - none -
fig|6666666.229903.peg.1580 CDS AZTZ01000408.1 463 296 -1 - 168 RNA-binding domain protein - none -
fig|6666666.229903.peg.1581 CDS AZTZ01000408.1 983 477 -2 - 507 FIG00696806: hypothetical protein - none -
fig|6666666.229903.peg.1582 CDS AZTZ01000408.1 1224 1054 -3 - 171 hypothetical protein - none -
fig|6666666.229903.peg.1583 CDS AZTZ01000408.1 1758 1306 -3 - 453 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229903.peg.1584 CDS AZTZ01000408.1 1968 3362 3 + 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229903.peg.1585 CDS AZTZ01000409.1 3 1790 3 + 1788 ABC transporter ATP-binding protein - none -
fig|6666666.229903.peg.1586 CDS AZTZ01000410.1 800 363 -2 - 438 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis Experimental
fig|6666666.229903.peg.1587 CDS AZTZ01000410.1 1366 866 -1 - 501 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis Experimental
fig|6666666.229903.peg.1588 CDS AZTZ01000410.1 1672 1382 -1 - 291 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229903.peg.1589 CDS AZTZ01000411.1 77 556 2 + 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229903.peg.1590 CDS AZTZ01000411.1 700 557 -1 - 144 hypothetical protein - none -
fig|6666666.229903.peg.1591 CDS AZTZ01000411.1 1122 1385 3 + 264 LSU ribosomal protein L20p - none -
fig|6666666.229903.peg.1592 CDS AZTZ01000413.1 294 25 -3 - 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229903.peg.1593 CDS AZTZ01000413.1 1139 390 -2 - 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229903.peg.1594 CDS AZTZ01000413.1 1953 1192 -3 - 762 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229903.peg.1595 CDS AZTZ01000415.1 2039 117 -2 - 1923 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229903.peg.1596 CDS AZTZ01000416.1 144 10 -3 - 135 hypothetical protein - none -
fig|6666666.229903.peg.1597 CDS AZTZ01000416.1 211 1515 1 + 1305 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229903.peg.1598 CDS AZTZ01000417.1 2355 2474 3 + 120 hypothetical protein - none -
fig|6666666.229903.peg.1599 CDS AZTZ01000418.1 1579 212 -1 - 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229903.peg.1600 CDS AZTZ01000418.1 2214 1603 -3 - 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229903.peg.1601 CDS AZTZ01000418.1 2327 2737 2 + 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229903.peg.1602 CDS AZTZ01000419.1 1242 91 -3 - 1152 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229903.peg.1603 CDS AZTZ01000420.1 1088 27 -2 - 1062 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229903.peg.1604 CDS AZTZ01000421.1 2318 63 -2 - 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229903.peg.1605 CDS AZTZ01000422.1 1142 246 -2 - 897 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229903.peg.1606 CDS AZTZ01000423.1 592 80 -1 - 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis
fig|6666666.229903.peg.1607 CDS AZTZ01000423.1 2055 592 -3 - 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229903.peg.1608 CDS AZTZ01000423.1 2208 2074 -3 - 135 hypothetical protein - none -
fig|6666666.229903.peg.1609 CDS AZTZ01000423.1 2433 2320 -3 - 114 hypothetical protein - none -
fig|6666666.229903.peg.1610 CDS AZTZ01000424.1 98 244 2 + 147 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229903.peg.1611 CDS AZTZ01000424.1 2192 360 -2 - 1833 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229903.peg.1612 CDS AZTZ01000425.1 166 1098 1 + 933 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229903.peg.1613 CDS AZTZ01000427.1 1818 127 -3 - 1692 ABC transporter ATP-binding protein - none -
fig|6666666.229903.peg.1614 CDS AZTZ01000428.1 150 974 3 + 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229903.peg.1615 CDS AZTZ01000428.1 1915 1040 -1 - 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229903.peg.1616 CDS AZTZ01000430.1 1496 123 -2 - 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229903.peg.1617 CDS AZTZ01000431.1 553 62 -1 - 492 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229903.peg.1618 CDS AZTZ01000432.1 60 647 3 + 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229903.peg.1619 CDS AZTZ01000432.1 662 853 2 + 192 hypothetical protein - none -
fig|6666666.229903.peg.1620 CDS AZTZ01000432.1 1418 936 -2 - 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229903.peg.1621 CDS AZTZ01000432.1 1548 1706 3 + 159 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229903.peg.1622 CDS AZTZ01000432.1 1716 1832 3 + 117 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229903.peg.1623 CDS AZTZ01000434.1 748 452 -1 - 297 hypothetical protein - none -
fig|6666666.229903.peg.1624 CDS AZTZ01000434.1 1182 754 -3 - 429 hypothetical protein - none -
fig|6666666.229903.peg.1625 CDS AZTZ01000437.1 2423 1305 -2 - 1119 Mll9366 protein CBSS-203122.12.peg.188
fig|6666666.229903.peg.1626 CDS AZTZ01000437.1 3274 2381 -1 - 894 TniB NTP-binding protein CBSS-203122.12.peg.188
fig|6666666.229903.peg.1627 CDS AZTZ01000437.1 5193 3274 -3 - 1920 TniA putative transposase CBSS-203122.12.peg.188
fig|6666666.229903.peg.1628 CDS AZTZ01000437.1 5584 5186 -1 - 399 FIGfam050825 CBSS-203122.12.peg.188
fig|6666666.229903.peg.1629 CDS AZTZ01000438.1 72 1637 3 + 1566 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229903.peg.1630 CDS AZTZ01000439.1 67 285 1 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229903.peg.1631 CDS AZTZ01000439.1 1165 347 -1 - 819 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229903.peg.1632 CDS AZTZ01000440.1 603 136 -3 - 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229903.peg.1633 CDS AZTZ01000440.1 1898 618 -2 - 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229903.peg.1634 CDS AZTZ01000441.1 588 451 -3 - 138 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229903.peg.1635 CDS AZTZ01000442.1 166 1014 1 + 849 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229903.peg.1636 CDS AZTZ01000442.1 1096 2028 1 + 933 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229903.peg.1637 CDS AZTZ01000443.1 870 19 -3 - 852 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229903.peg.1638 CDS AZTZ01000443.1 1514 867 -2 - 648 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229903.peg.1639 CDS AZTZ01000444.1 168 1826 3 + 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229903.peg.1640 CDS AZTZ01000445.1 27 350 3 + 324 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.1641 CDS AZTZ01000446.1 402 4 -3 - 399 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229903.peg.1642 CDS AZTZ01000447.1 230 1147 2 + 918 Mobile element protein - none -
fig|6666666.229903.peg.1643 CDS AZTZ01000447.1 2118 1387 -3 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229903.peg.1644 CDS AZTZ01000447.1 3348 2134 -3 - 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229903.peg.1645 CDS AZTZ01000448.1 53 580 2 + 528 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229903.peg.1646 CDS AZTZ01000448.1 1494 646 -3 - 849 RNA polymerase sigma factor RpoH Transcription initiation, bacterial sigma factors
fig|6666666.229903.peg.1647 CDS AZTZ01000449.1 1094 201 -2 - 894 Tyrosine-specific transport protein - none -
fig|6666666.229903.peg.1648 CDS AZTZ01000450.1 32 298 2 + 267 FIG00697940: hypothetical protein - none -
fig|6666666.229903.peg.1649 CDS AZTZ01000450.1 488 757 2 + 270 hypothetical protein - none -
fig|6666666.229903.peg.1650 CDS AZTZ01000451.1 1715 429 -2 - 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229903.peg.1651 CDS AZTZ01000451.1 2304 1744 -3 - 561 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229903.peg.1652 CDS AZTZ01000452.1 71 658 2 + 588 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229903.peg.1653 CDS AZTZ01000452.1 719 1963 2 + 1245 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229903.peg.1654 CDS AZTZ01000453.1 27 947 3 + 921 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229903.peg.1655 CDS AZTZ01000456.1 2046 4 -3 - 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229903.peg.1656 CDS AZTZ01000458.1 725 66 -2 - 660 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229903.peg.1657 CDS AZTZ01000459.1 13 978 1 + 966 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229903.peg.1658 CDS AZTZ01000459.1 1027 2601 1 + 1575 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229903.peg.1659 CDS AZTZ01000459.1 3415 2687 -1 - 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis Experimental
fig|6666666.229903.peg.1660 CDS AZTZ01000461.1 188 1738 2 + 1551 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.1661 CDS AZTZ01000462.1 878 30 -2 - 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229903.peg.1662 CDS AZTZ01000462.1 1137 1349 3 + 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent - none -
fig|6666666.229903.peg.1663 CDS AZTZ01000462.1 1411 2103 1 + 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229903.peg.1664 CDS AZTZ01000463.1 119 1822 2 + 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229903.peg.1665 CDS AZTZ01000463.1 1837 2862 1 + 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229903.peg.1666 CDS AZTZ01000463.1 2877 3191 3 + 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229903.peg.1667 CDS AZTZ01000464.1 93 1211 3 + 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
YrdC-YciO-Sua5 protein family
fig|6666666.229903.peg.1668 CDS AZTZ01000464.1 2149 1268 -1 - 882 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229903.peg.1669 CDS AZTZ01000465.1 1163 87 -2 - 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229903.peg.1670 CDS AZTZ01000465.1 2219 1167 -2 - 1053 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229903.peg.1671 CDS AZTZ01000466.1 732 25 -3 - 708 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229903.peg.1672 CDS AZTZ01000467.1 13 279 1 + 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229903.peg.1673 CDS AZTZ01000467.1 311 1870 2 + 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229903.peg.1674 CDS AZTZ01000469.1 1752 298 -3 - 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229903.peg.1675 CDS AZTZ01000471.1 30 884 3 + 855 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229903.peg.1676 CDS AZTZ01000472.1 44 166 2 + 123 hypothetical protein - none -
fig|6666666.229903.peg.1677 CDS AZTZ01000474.1 838 65 -1 - 774 transcriptional regulator, putative - none -
fig|6666666.229903.peg.1678 CDS AZTZ01000475.1 153 1352 3 + 1200 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.229903.peg.1679 CDS AZTZ01000475.1 1682 1389 -2 - 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229903.peg.1680 CDS AZTZ01000477.1 86 595 2 + 510 Hydrogenase-2 operon protein hybE - none -
fig|6666666.229903.peg.1681 CDS AZTZ01000477.1 625 900 1 + 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229903.peg.1682 CDS AZTZ01000478.1 588 28 -3 - 561 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229903.peg.1683 CDS AZTZ01000479.1 190 978 1 + 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229903.peg.1684 CDS AZTZ01000479.1 1091 2464 2 + 1374 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229903.peg.1685 CDS AZTZ01000480.1 86 727 2 + 642 Stringent starvation protein A Carbon Starvation
fig|6666666.229903.peg.1686 CDS AZTZ01000480.1 739 1200 1 + 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229903.peg.1687 CDS AZTZ01000480.1 1201 1332 1 + 132 hypothetical protein - none -
fig|6666666.229903.peg.1688 CDS AZTZ01000480.1 2017 1361 -1 - 657 Asparaginyl-tRNA synthetase (EC 6.1.1.22) - none -
fig|6666666.229903.peg.1689 CDS AZTZ01000480.1 2763 2014 -3 - 750 Asparaginyl-tRNA synthetase (EC 6.1.1.22) - none -
fig|6666666.229903.peg.1690 CDS AZTZ01000482.1 73 264 1 + 192 hypothetical protein - none -
fig|6666666.229903.peg.1691 CDS AZTZ01000482.1 382 546 1 + 165 hypothetical protein - none -
fig|6666666.229903.peg.1692 CDS AZTZ01000482.1 699 893 3 + 195 hypothetical protein - none -
fig|6666666.229903.peg.1693 CDS AZTZ01000482.1 1033 1185 1 + 153 hypothetical protein - none -
fig|6666666.229903.peg.1694 CDS AZTZ01000482.1 1175 1312 2 + 138 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229903.peg.1695 CDS AZTZ01000483.1 74 1072 2 + 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229903.peg.1696 CDS AZTZ01000483.1 1182 1364 3 + 183 hypothetical protein - none -
fig|6666666.229903.peg.1697 CDS AZTZ01000483.1 1366 1686 1 + 321 putative cytoplasmic protein - none -
fig|6666666.229903.peg.1698 CDS AZTZ01000485.1 1940 1281 -2 - 660 putative membrane protein - none -
fig|6666666.229903.peg.1699 CDS AZTZ01000485.1 2136 2020 -3 - 117 hypothetical protein - none -
fig|6666666.229903.peg.1700 CDS AZTZ01000485.1 2151 2957 3 + 807 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229903.peg.1701 CDS AZTZ01000486.1 244 92 -1 - 153 Mobile element protein - none -
fig|6666666.229903.peg.1702 CDS AZTZ01000487.1 770 33 -2 - 738 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily - none -
fig|6666666.229903.peg.1703 CDS AZTZ01000490.1 650 51 -2 - 600 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229903.peg.1704 CDS AZTZ01000490.1 1282 662 -1 - 621 Sodium-dependent transporter - none -
fig|6666666.229903.peg.1705 CDS AZTZ01000491.1 102 980 3 + 879 Xylose activator XylR (AraC family) - none -
fig|6666666.229903.peg.1706 CDS AZTZ01000492.1 1163 741 -2 - 423 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) Hydrogenases
fig|6666666.229903.peg.1707 CDS AZTZ01000492.1 1479 1192 -3 - 288 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229903.peg.1708 CDS AZTZ01000494.1 21 605 3 + 585 Outer membrane and periplasm component of type IV secretion of T-DNA complex, has secretin-like domain, VirB9 - none -
fig|6666666.229903.peg.1709 CDS AZTZ01000494.1 616 1107 1 + 492 hypothetical protein - none -
fig|6666666.229903.peg.1710 CDS AZTZ01000494.1 1118 1459 2 + 342 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229903.peg.1711 CDS AZTZ01000494.1 1428 2231 3 + 804 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229903.peg.1712 CDS AZTZ01000494.1 2231 2533 2 + 303 ABC transporter ATP-binding protein - none -
fig|6666666.229903.peg.1713 CDS AZTZ01000494.1 2534 2848 2 + 315 ABC transporter ATP-binding protein - none -
fig|6666666.229903.peg.1714 CDS AZTZ01000494.1 2845 3690 1 + 846 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229903.peg.1715 CDS AZTZ01000496.1 159 584 3 + 426 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) Llipid A biosynthesis cluster
fig|6666666.229903.peg.1716 CDS AZTZ01000497.1 638 303 -2 - 336 FIG023677: hypothetical protein CBSS-399599.3.peg.3584
fig|6666666.229903.peg.1717 CDS AZTZ01000498.1 513 31 -3 - 483 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229903.peg.1718 CDS AZTZ01000499.1 124 1203 1 + 1080 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation
fig|6666666.229903.peg.1719 CDS AZTZ01000499.1 1487 1266 -2 - 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229903.peg.1720 CDS AZTZ01000501.1 427 1446 1 + 1020 Lysine 2,3-aminomutase (EC 5.4.3.2) - none -
fig|6666666.229903.peg.1721 CDS AZTZ01000502.1 20 1099 2 + 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229903.peg.1722 CDS AZTZ01000503.1 1996 746 -1 - 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229903.peg.1723 CDS AZTZ01000503.1 3395 2286 -2 - 1110 Cof protein - none -
fig|6666666.229903.peg.1724 CDS AZTZ01000504.1 91 1128 1 + 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis
fig|6666666.229903.peg.1725 CDS AZTZ01000504.1 1118 1795 2 + 678 Methionine ABC transporter permease protein Methionine Biosynthesis
fig|6666666.229903.peg.1726 CDS AZTZ01000505.1 417 196 -3 - 222 Malate dehydrogenase (EC 1.1.1.37) TCA Cycle
fig|6666666.229903.peg.1727 CDS AZTZ01000507.1 75 236 3 + 162 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229903.peg.1728 CDS AZTZ01000507.1 908 330 -2 - 579 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229903.peg.1729 CDS AZTZ01000507.1 2728 908 -1 - 1821 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229903.peg.1730 CDS AZTZ01000508.1 550 80 -1 - 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229903.peg.1731 CDS AZTZ01000509.1 105 812 3 + 708 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229903.peg.1732 CDS AZTZ01000509.1 830 2173 2 + 1344 putative hexose phosphate transport protein - none -
fig|6666666.229903.peg.1733 CDS AZTZ01000510.1 41 244 2 + 204 Protein sprT - none -
fig|6666666.229903.peg.1734 CDS AZTZ01000510.1 244 438 1 + 195 Protein sprT - none -
fig|6666666.229903.peg.1735 CDS AZTZ01000513.1 161 33 -2 - 129 hypothetical protein - none -
fig|6666666.229903.peg.1736 CDS AZTZ01000515.1 76 189 1 + 114 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229903.peg.1737 CDS AZTZ01000515.1 254 1291 2 + 1038 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229903.peg.1738 CDS AZTZ01000516.1 19 249 1 + 231 FIG004454: RNA binding protein - none -
fig|6666666.229903.peg.1739 CDS AZTZ01000516.1 800 324 -2 - 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229903.peg.1740 CDS AZTZ01000517.1 140 1738 2 + 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229903.peg.1741 CDS AZTZ01000517.1 2000 2458 2 + 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229903.peg.1742 CDS AZTZ01000517.1 2568 3536 3 + 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229903.peg.1743 CDS AZTZ01000518.1 167 892 2 + 726 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229903.peg.1744 CDS AZTZ01000519.1 492 103 -3 - 390 LSU ribosomal protein L17p - none -
fig|6666666.229903.peg.1745 CDS AZTZ01000519.1 1523 534 -2 - 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229903.peg.1746 CDS AZTZ01000519.1 1983 1552 -3 - 432 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229903.peg.1747 CDS AZTZ01000519.1 2591 2202 -2 - 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229903.peg.1748 CDS AZTZ01000519.1 2963 2607 -2 - 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229903.peg.1749 CDS AZTZ01000519.1 4569 3244 -3 - 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229903.peg.1750 CDS AZTZ01000520.1 209 69 -2 - 141 hypothetical protein - none -
fig|6666666.229903.peg.1751 CDS AZTZ01000521.1 258 701 3 + 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229903.peg.1752 CDS AZTZ01000523.1 92 1057 2 + 966 tRNA(Cytosine32)-2-thiocytidine synthetase - none -
fig|6666666.229903.peg.1753 CDS AZTZ01000523.1 1640 1152 -2 - 489 Probable lipoprotein nlpC precursor - none -
fig|6666666.229903.peg.1754 CDS AZTZ01000525.1 170 502 2 + 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229903.peg.1755 CDS AZTZ01000525.1 1337 657 -2 - 681 L-lactate permease Lactate utilization
fig|6666666.229903.peg.1756 CDS AZTZ01000527.1 728 432 -2 - 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229903.peg.1757 CDS AZTZ01000527.1 881 738 -2 - 144 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229903.peg.1758 CDS AZTZ01000527.1 2236 1136 -1 - 1101 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229903.peg.1759 CDS AZTZ01000528.1 54 1958 3 + 1905 Chaperone protein DnaK GroEL GroES;
Protein chaperones
fig|6666666.229903.peg.1760 CDS AZTZ01000530.1 35 463 2 + 429 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-316407.3.peg.1371;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229903.peg.1761 CDS AZTZ01000532.1 306 88 -3 - 219 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229903.peg.1762 CDS AZTZ01000532.1 1259 546 -2 - 714 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229903.peg.1763 CDS AZTZ01000535.1 130 516 1 + 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229903.peg.1764 CDS AZTZ01000535.1 516 1433 3 + 918 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA processing
fig|6666666.229903.peg.1765 CDS AZTZ01000535.1 1742 1524 -2 - 219 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.229903.peg.1766 CDS AZTZ01000535.1 1947 1732 -3 - 216 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.229903.peg.1767 CDS AZTZ01000535.1 2123 1989 -2 - 135 hypothetical protein - none -
fig|6666666.229903.peg.1768 CDS AZTZ01000535.1 2341 2120 -1 - 222 Fructokinase (EC 2.7.1.4) Fructose utilization;
Mannitol Utilization
fig|6666666.229903.peg.1769 CDS AZTZ01000537.1 133 264 1 + 132 hypothetical protein - none -
fig|6666666.229903.peg.1770 CDS AZTZ01000537.1 1484 258 -2 - 1227 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229903.peg.1771 CDS AZTZ01000539.1 31 168 1 + 138 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229903.peg.1772 CDS AZTZ01000541.1 25 705 1 + 681 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229903.peg.1773 CDS AZTZ01000542.1 189 1 -3 - 189 Huntingtin interacting protein E-like protein - none -
fig|6666666.229903.peg.1774 CDS AZTZ01000542.1 435 283 -3 - 153 hypothetical protein - none -
fig|6666666.229903.peg.1775 CDS AZTZ01000542.1 580 413 -1 - 168 hypothetical protein - none -
fig|6666666.229903.peg.1776 CDS AZTZ01000544.1 4 513 1 + 510 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229903.peg.1777 CDS AZTZ01000545.1 261 542 3 + 282 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229903.peg.1778 CDS AZTZ01000545.1 581 1165 2 + 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229903.peg.1779 CDS AZTZ01000547.1 327 40 -3 - 288 FIG024746: hypothetical protein CBSS-399599.3.peg.3584
fig|6666666.229903.peg.1780 CDS AZTZ01000550.1 380 48 -2 - 333 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229903.peg.1781 CDS AZTZ01000553.1 251 105 -2 - 147 hypothetical protein - none -
fig|6666666.229903.peg.1782 CDS AZTZ01000555.1 866 84 -2 - 783 Universal stress protein E Universal stress protein family
fig|6666666.229903.peg.1783 CDS AZTZ01000556.1 96 314 3 + 219 FIG074102: hypothetical protein - none -
fig|6666666.229903.peg.1784 CDS AZTZ01000556.1 372 815 3 + 444 Flavoprotein MioC Flavodoxin
fig|6666666.229903.peg.1785 CDS AZTZ01000557.1 36 581 3 + 546 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229903.peg.1786 CDS AZTZ01000557.1 853 1026 1 + 174 LSU ribosomal protein L28p - none -
fig|6666666.229903.peg.1787 CDS AZTZ01000557.1 1038 1208 3 + 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent - none -
fig|6666666.229903.peg.1788 CDS AZTZ01000557.1 1249 2106 1 + 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229903.peg.1789 CDS AZTZ01000557.1 2414 2109 -2 - 306 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229903.peg.1790 CDS AZTZ01000558.1 74 253 2 + 180 Probable tonB-dependent receptor HI1217 precursor - none -
fig|6666666.229903.peg.1791 CDS AZTZ01000560.1 910 587 -1 - 324 FIG00696423: hypothetical protein - none -
fig|6666666.229903.peg.1792 CDS AZTZ01000561.1 322 846 1 + 525 Flavodoxin 1 Flavodoxin
fig|6666666.229903.peg.1793 CDS AZTZ01000567.1 411 124 -3 - 288 LSU ribosomal protein L25p Transcription repair cluster
fig|6666666.229903.peg.1794 CDS AZTZ01000570.1 611 922 2 + 312 LSU ribosomal protein L24p (L26e) - none -
fig|6666666.229903.peg.1795 CDS AZTZ01000571.1 318 199 -3 - 120 hypothetical protein - none -
fig|6666666.229903.peg.1796 CDS AZTZ01000573.1 561 103 -3 - 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229903.peg.1797 CDS AZTZ01000573.1 895 641 -1 - 255 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229903.peg.1798 CDS AZTZ01000573.1 1051 908 -1 - 144 Aspartate racemase (EC 5.1.1.13) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229903.peg.1799 CDS AZTZ01000574.1 138 1208 3 + 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229903.peg.1800 CDS AZTZ01000577.1 124 540 1 + 417 Glycerol-3-phosphate transporter - none -
fig|6666666.229903.peg.1801 CDS AZTZ01000579.1 511 122 -1 - 390 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229903.peg.1802 CDS AZTZ01000580.1 704 75 -2 - 630 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) RNA methylation
fig|6666666.229903.peg.1803 CDS AZTZ01000580.1 1675 839 -1 - 837 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229903.peg.1804 CDS AZTZ01000581.1 36 764 3 + 729 Minor pilin of type IV secretion complex, VirB5 - none -
fig|6666666.229903.peg.1805 CDS AZTZ01000582.1 30 452 3 + 423 FIG00696993: hypothetical protein - none -
fig|6666666.229903.peg.1806 CDS AZTZ01000586.1 287 54 -2 - 234 FIG074102: hypothetical protein - none -
fig|6666666.229903.peg.1807 CDS AZTZ01000588.1 63 422 3 + 360 Antiholin-like protein LrgA - none -
fig|6666666.229903.peg.1808 CDS AZTZ01000590.1 486 82 -3 - 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229903.rna.1 RNA AZTZ01000011.1 236 1792 2 + 1557 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229903.rna.2 RNA AZTZ01000049.1 152 66 -2 - 87 tRNA-Ser-TGA - none -
fig|6666666.229903.rna.3 RNA AZTZ01000050.1 4216 4288 1 + 73 tRNA-Phe-GAA - none -
fig|6666666.229903.rna.4 RNA AZTZ01000050.1 4296 4368 3 + 73 tRNA-Asn-GTT - none -
fig|6666666.229903.rna.5 RNA AZTZ01000054.1 77 4 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.229903.rna.6 RNA AZTZ01000056.1 1413 1485 3 + 73 tRNA-Gly-GCC - none -
fig|6666666.229903.rna.7 RNA AZTZ01000062.1 185 3227 2 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229903.rna.8 RNA AZTZ01000062.1 3483 3601 3 + 119 5S RNA - none -
fig|6666666.229903.rna.9 RNA AZTZ01000110.1 2472 2399 -3 - 74 tRNA-Arg-ACG - none -
fig|6666666.229903.rna.10 RNA AZTZ01000110.1 2603 2530 -2 - 74 tRNA-Arg-ACG - none -
fig|6666666.229903.rna.11 RNA AZTZ01000110.1 2714 2624 -2 - 91 tRNA-Ser-GCT - none -
fig|6666666.229903.rna.12 RNA AZTZ01000125.1 1418 1490 2 + 73 tRNA-Ala-GGC - none -
fig|6666666.229903.rna.13 RNA AZTZ01000151.1 1158 1075 -3 - 84 tRNA-Leu-CAG - none -
fig|6666666.229903.rna.14 RNA AZTZ01000158.1 9368 9296 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.229903.rna.15 RNA AZTZ01000228.1 162 244 3 + 83 tRNA-Leu-CAA - none -
fig|6666666.229903.rna.16 RNA AZTZ01000239.1 318 232 -3 - 87 tRNA-Ser-GGA - none -
fig|6666666.229903.rna.17 RNA AZTZ01000242.1 567 637 3 + 71 tRNA-Pseudo-AAC - none -
fig|6666666.229903.rna.18 RNA AZTZ01000256.1 826 899 1 + 74 tRNA-Val-GAC - none -
fig|6666666.229903.rna.19 RNA AZTZ01000264.1 90 163 3 + 74 tRNA-Ile-GAT - none -
fig|6666666.229903.rna.20 RNA AZTZ01000264.1 216 288 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.229903.rna.21 RNA AZTZ01000267.1 4903 4976 1 + 74 tRNA-Asp-GTC - none -
fig|6666666.229903.rna.22 RNA AZTZ01000267.1 5002 5075 1 + 74 tRNA-Asp-GTC - none -
fig|6666666.229903.rna.23 RNA AZTZ01000320.1 57 128 3 + 72 tRNA-Gly-TCC - none -
fig|6666666.229903.rna.24 RNA AZTZ01000320.1 135 207 3 + 73 tRNA-Thr-GGT - none -
fig|6666666.229903.rna.25 RNA AZTZ01000337.1 108 181 3 + 74 tRNA-Met-CAT - none -
fig|6666666.229903.rna.26 RNA AZTZ01000337.1 190 271 1 + 82 tRNA-Leu-TAG - none -
fig|6666666.229903.rna.27 RNA AZTZ01000337.1 304 375 1 + 72 tRNA-Gln-TTG - none -
fig|6666666.229903.rna.28 RNA AZTZ01000400.1 80 152 2 + 73 tRNA-Lys-TTT - none -
fig|6666666.229903.rna.29 RNA AZTZ01000422.1 34 106 1 + 73 tRNA-Lys-TTT - none -
fig|6666666.229903.rna.30 RNA AZTZ01000422.1 134 207 2 + 74 tRNA-Lys-CTT - none -
fig|6666666.229903.rna.31 RNA AZTZ01000479.1 7 78 1 + 72 tRNA-Val-TAC - none -
fig|6666666.229903.rna.32 RNA AZTZ01000512.1 114 187 3 + 74 tRNA-Arg-CCG - none -
fig|6666666.229903.rna.33 RNA AZTZ01000512.1 228 300 3 + 73 tRNA-His-GTG - none -
fig|6666666.229903.rna.34 RNA AZTZ01000512.1 306 379 3 + 74 tRNA-Pro-TGG - none -
fig|6666666.229903.rna.35 RNA AZTZ01000512.1 416 489 2 + 74 tRNA-Arg-TCT - none -
fig|6666666.229903.rna.36 RNA AZTZ01000542.1 873 783 -3 - 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229903.rna.37 RNA AZTZ01000572.1 140 212 2 + 73 tRNA-Gly-GCC - none -
fig|6666666.229903.rna.38 RNA AZTZ01000572.1 224 294 2 + 71 tRNA-Cys-GCA - none -