fig|6666666.229904.peg.1 CDS CP001733.2 581 351 -2 - 231 hypothetical protein - none -
fig|6666666.229904.peg.2 CDS CP001733.2 1498 578 -1 - 921 Mu phage DNA transposition protein B - none -
fig|6666666.229904.peg.3 CDS CP001733.2 3552 1534 -3 - 2019 transposase - none -
fig|6666666.229904.peg.4 CDS CP001733.2 3818 3567 -2 - 252 possible DNA-binding protein - none -
fig|6666666.229904.peg.5 CDS CP001733.2 4314 4727 3 + 414 transcriptional regulatory protein - none -
fig|6666666.229904.peg.6 CDS CP001733.2 4862 4746 -2 - 117 hypothetical protein - none -
fig|6666666.229904.peg.7 CDS CP001733.2 6176 5001 -2 - 1176 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229904.peg.8 CDS CP001733.2 7299 6169 -3 - 1131 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229904.peg.9 CDS CP001733.2 7457 7263 -2 - 195 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229904.peg.10 CDS CP001733.2 7680 8549 3 + 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.11 CDS CP001733.2 8575 9207 1 + 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229904.peg.12 CDS CP001733.2 9513 9271 -3 - 243 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229904.peg.13 CDS CP001733.2 10007 9507 -2 - 501 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229904.peg.14 CDS CP001733.2 10185 10009 -3 - 177 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229904.peg.15 CDS CP001733.2 10243 11028 1 + 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229904.peg.16 CDS CP001733.2 11030 11494 2 + 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229904.peg.17 CDS CP001733.2 11534 12019 2 + 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229904.peg.18 CDS CP001733.2 13449 12139 -3 - 1311 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229904.peg.19 CDS CP001733.2 13403 13543 2 + 141 hypothetical protein - none -
fig|6666666.229904.peg.20 CDS CP001733.2 14064 13540 -3 - 525 FIG00696143: hypothetical protein - none -
fig|6666666.229904.peg.21 CDS CP001733.2 14878 14096 -1 - 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229904.peg.22 CDS CP001733.2 15865 14882 -1 - 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229904.peg.23 CDS CP001733.2 16491 15862 -3 - 630 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229904.peg.24 CDS CP001733.2 17536 16493 -1 - 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229904.peg.25 CDS CP001733.2 18013 17675 -1 - 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229904.peg.26 CDS CP001733.2 18847 18089 -1 - 759 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229904.peg.27 CDS CP001733.2 19124 19945 2 + 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229904.peg.28 CDS CP001733.2 19948 21192 1 + 1245 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) - none -
fig|6666666.229904.peg.29 CDS CP001733.2 21189 21821 3 + 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229904.peg.30 CDS CP001733.2 21824 22600 2 + 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229904.peg.31 CDS CP001733.2 22689 24041 3 + 1353 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229904.peg.32 CDS CP001733.2 24066 25406 3 + 1341 FIG00782214: hypothetical protein - none -
fig|6666666.229904.peg.33 CDS CP001733.2 25424 26116 2 + 693 Metal-dependent hydrolase - none -
fig|6666666.229904.peg.34 CDS CP001733.2 26216 26088 -2 - 129 hypothetical protein - none -
fig|6666666.229904.peg.35 CDS CP001733.2 26164 27960 1 + 1797 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229904.peg.36 CDS CP001733.2 28156 28974 1 + 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229904.peg.37 CDS CP001733.2 31780 29180 -1 - 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229904.peg.38 CDS CP001733.2 32911 31865 -1 - 1047 hypothetical protein - none -
fig|6666666.229904.peg.39 CDS CP001733.2 33856 33098 -1 - 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229904.peg.40 CDS CP001733.2 34955 33858 -2 - 1098 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) - none -
fig|6666666.229904.peg.41 CDS CP001733.2 35354 35025 -2 - 330 Protein yifE - none -
fig|6666666.229904.peg.42 CDS CP001733.2 36031 35414 -1 - 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229904.peg.43 CDS CP001733.2 36316 36050 -1 - 267 Protein yihD - none -
fig|6666666.229904.peg.44 CDS CP001733.2 36400 36984 1 + 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229904.peg.45 CDS CP001733.2 37083 37613 3 + 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229904.peg.46 CDS CP001733.2 37725 39254 3 + 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229904.peg.47 CDS CP001733.2 39257 40198 2 + 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229904.peg.48 CDS CP001733.2 40203 41867 3 + 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229904.peg.49 CDS CP001733.2 41889 42167 3 + 279 hypothetical protein - none -
fig|6666666.229904.peg.50 CDS CP001733.2 42202 42333 1 + 132 hypothetical protein - none -
fig|6666666.229904.peg.51 CDS CP001733.2 42531 42385 -3 - 147 hypothetical protein - none -
fig|6666666.229904.peg.52 CDS CP001733.2 42884 42552 -2 - 333 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229904.peg.53 CDS CP001733.2 42899 43450 2 + 552 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229904.peg.54 CDS CP001733.2 43532 43870 2 + 339 hypothetical protein - none -
fig|6666666.229904.peg.55 CDS CP001733.2 44016 44720 3 + 705 hypothetical protein - none -
fig|6666666.229904.peg.56 CDS CP001733.2 44707 44829 1 + 123 hypothetical protein - none -
fig|6666666.229904.peg.57 CDS CP001733.2 45162 45572 3 + 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229904.peg.58 CDS CP001733.2 45574 46125 1 + 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229904.peg.59 CDS CP001733.2 46281 46709 3 + 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229904.peg.60 CDS CP001733.2 46714 47403 1 + 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229904.peg.61 CDS CP001733.2 47418 47594 3 + 177 hypothetical protein - none -
fig|6666666.229904.peg.62 CDS CP001733.2 47765 48256 2 + 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229904.peg.63 CDS CP001733.2 48308 48679 2 + 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229904.peg.64 CDS CP001733.2 48950 52978 2 + 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229904.peg.65 CDS CP001733.2 53083 57351 1 + 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229904.peg.66 CDS CP001733.2 57746 57561 -2 - 186 Mobile element protein - none -
fig|6666666.229904.peg.67 CDS CP001733.2 58372 58115 -1 - 258 SSU ribosomal protein S17p (S11e) - none -
fig|6666666.229904.peg.68 CDS CP001733.2 58563 58372 -3 - 192 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.229904.peg.69 CDS CP001733.2 58973 58563 -2 - 411 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.229904.peg.70 CDS CP001733.2 59694 58987 -3 - 708 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.229904.peg.71 CDS CP001733.2 60043 59711 -1 - 333 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.229904.peg.72 CDS CP001733.2 60200 60054 -2 - 147 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.229904.peg.73 CDS CP001733.2 61176 60355 -3 - 822 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.229904.peg.74 CDS CP001733.2 61499 61197 -2 - 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.229904.peg.75 CDS CP001733.2 62098 61496 -1 - 603 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.229904.peg.76 CDS CP001733.2 62740 62114 -1 - 627 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.229904.peg.77 CDS CP001733.2 63068 62757 -2 - 312 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.229904.peg.78 CDS CP001733.2 64216 63320 -1 - 897 Transcriptional regulators, LysR family - none -
fig|6666666.229904.peg.79 CDS CP001733.2 64554 65144 3 + 591 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229904.peg.80 CDS CP001733.2 65156 65821 2 + 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229904.peg.81 CDS CP001733.2 65824 67167 1 + 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229904.peg.82 CDS CP001733.2 67185 68366 3 + 1182 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.229904.peg.83 CDS CP001733.2 68931 68464 -3 - 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229904.peg.84 CDS CP001733.2 70551 69022 -3 - 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229904.peg.85 CDS CP001733.2 71600 70668 -2 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229904.peg.86 CDS CP001733.2 72614 71610 -2 - 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229904.peg.87 CDS CP001733.2 72857 74248 2 + 1392 Chloride channel protein - none -
fig|6666666.229904.peg.88 CDS CP001733.2 74251 75234 1 + 984 tRNA dihydrouridine synthase A - none -
fig|6666666.229904.peg.89 CDS CP001733.2 76282 75290 -1 - 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229904.peg.90 CDS CP001733.2 76448 76900 2 + 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229904.peg.91 CDS CP001733.2 76934 77692 2 + 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229904.peg.92 CDS CP001733.2 78890 77829 -2 - 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229904.peg.93 CDS CP001733.2 78964 79314 1 + 351 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229904.peg.94 CDS CP001733.2 79780 79418 -1 - 363 FIG00696564: hypothetical protein - none -
fig|6666666.229904.peg.95 CDS CP001733.2 80015 79731 -2 - 285 hypothetical protein - none -
fig|6666666.229904.peg.96 CDS CP001733.2 80224 81555 1 + 1332 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229904.peg.97 CDS CP001733.2 81680 82084 2 + 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229904.peg.98 CDS CP001733.2 82211 82429 2 + 219 hypothetical protein - none -
fig|6666666.229904.peg.99 CDS CP001733.2 83109 82513 -3 - 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229904.peg.100 CDS CP001733.2 83923 83204 -1 - 720 probable periplasmic protein NMA1059 - none -
fig|6666666.229904.peg.101 CDS CP001733.2 84408 83974 -3 - 435 Ribonuclease E inhibitor RraB RNA processing and degradation, bacterial
fig|6666666.229904.peg.102 CDS CP001733.2 84898 84503 -1 - 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229904.peg.103 CDS CP001733.2 86384 85008 -2 - 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229904.peg.104 CDS CP001733.2 87763 86408 -1 - 1356 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.229904.peg.105 CDS CP001733.2 88722 87763 -3 - 960 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229904.peg.106 CDS CP001733.2 89297 88785 -2 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229904.peg.107 CDS CP001733.2 95780 95223 -2 - 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229904.peg.108 CDS CP001733.2 95977 97014 1 + 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229904.peg.109 CDS CP001733.2 97004 97681 2 + 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229904.peg.110 CDS CP001733.2 97716 98558 3 + 843 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229904.peg.111 CDS CP001733.2 98664 99161 3 + 498 Phospholipid-binding protein - none -
fig|6666666.229904.peg.112 CDS CP001733.2 99280 99756 1 + 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) Biotin synthesis cluster;
RNA methylation
fig|6666666.229904.peg.113 CDS CP001733.2 100727 99852 -2 - 876 Membrane protein LAPB - none -
fig|6666666.229904.peg.114 CDS CP001733.2 100850 100737 -2 - 114 hypothetical protein - none -
fig|6666666.229904.peg.115 CDS CP001733.2 100860 101474 3 + 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229904.peg.116 CDS CP001733.2 101589 102455 3 + 867 MG(2+) CHELATASE FAMILY PROTEIN CBSS-203122.12.peg.188
fig|6666666.229904.peg.117 CDS CP001733.2 102558 104390 3 + 1833 hypothetical protein - none -
fig|6666666.229904.peg.118 CDS CP001733.2 104399 105487 2 + 1089 hypothetical protein - none -
fig|6666666.229904.peg.119 CDS CP001733.2 105484 106482 1 + 999 GTP pyrophosphokinase (EC 2.7.6.5) - none -
fig|6666666.229904.peg.120 CDS CP001733.2 106697 109564 2 + 2868 DNA helicase IV CBSS-83333.1.peg.946;
DNA repair, bacterial UvrD and related helicases
fig|6666666.229904.peg.121 CDS CP001733.2 109594 110832 1 + 1239 hypothetical protein - none -
fig|6666666.229904.peg.122 CDS CP001733.2 110786 111571 2 + 786 hypothetical protein - none -
fig|6666666.229904.peg.123 CDS CP001733.2 111731 111943 2 + 213 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229904.peg.124 CDS CP001733.2 111955 112629 1 + 675 hypothetical protein - none -
fig|6666666.229904.peg.125 CDS CP001733.2 113185 112709 -1 - 477 hypothetical protein - none -
fig|6666666.229904.peg.126 CDS CP001733.2 115936 113315 -1 - 2622 FIG00647261: hypothetical protein - none -
fig|6666666.229904.peg.127 CDS CP001733.2 117586 115946 -1 - 1641 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229904.peg.128 CDS CP001733.2 117811 117599 -1 - 213 hypothetical protein - none -
fig|6666666.229904.peg.129 CDS CP001733.2 119356 117932 -1 - 1425 FIGfam110555 CBSS-203122.12.peg.188
fig|6666666.229904.peg.130 CDS CP001733.2 120471 119353 -3 - 1119 Mll9366 protein CBSS-203122.12.peg.188
fig|6666666.229904.peg.131 CDS CP001733.2 121322 120429 -2 - 894 TniB NTP-binding protein CBSS-203122.12.peg.188
fig|6666666.229904.peg.132 CDS CP001733.2 123241 121322 -1 - 1920 Mobile element protein - none -
fig|6666666.229904.peg.133 CDS CP001733.2 123896 123234 -2 - 663 FIGfam050825 CBSS-203122.12.peg.188
fig|6666666.229904.peg.134 CDS CP001733.2 124032 124736 3 + 705 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein CBSS-203122.12.peg.188;
CBSS-203122.12.peg.188
fig|6666666.229904.peg.135 CDS CP001733.2 125575 124748 -1 - 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229904.peg.136 CDS CP001733.2 126789 125572 -3 - 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229904.peg.137 CDS CP001733.2 128698 127040 -1 - 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229904.peg.138 CDS CP001733.2 129004 129687 1 + 684 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229904.peg.139 CDS CP001733.2 130266 129772 -3 - 495 Protein yfbU - none -
fig|6666666.229904.peg.140 CDS CP001733.2 131060 130284 -2 - 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229904.peg.141 CDS CP001733.2 132709 131126 -1 - 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229904.peg.142 CDS CP001733.2 134106 132775 -3 - 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229904.peg.143 CDS CP001733.2 134654 134127 -2 - 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229904.peg.144 CDS CP001733.2 134869 135576 1 + 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229904.peg.145 CDS CP001733.2 136071 135958 -3 - 114 hypothetical protein - none -
fig|6666666.229904.peg.146 CDS CP001733.2 136275 136141 -3 - 135 hypothetical protein - none -
fig|6666666.229904.peg.147 CDS CP001733.2 137798 136554 -2 - 1245 Tryptophan-specific transport protein - none -
fig|6666666.229904.peg.148 CDS CP001733.2 137960 138487 2 + 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229904.peg.149 CDS CP001733.2 138563 139336 2 + 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229904.peg.150 CDS CP001733.2 140016 140660 3 + 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229904.peg.151 CDS CP001733.2 141751 140747 -1 - 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229904.peg.152 CDS CP001733.2 143287 141926 -1 - 1362 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229904.peg.153 CDS CP001733.2 143375 143959 2 + 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229904.peg.154 CDS CP001733.2 144246 145211 3 + 966 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229904.peg.155 CDS CP001733.2 145229 146026 2 + 798 PTS system, mannose-specific IIC component - none -
fig|6666666.229904.peg.156 CDS CP001733.2 146040 146876 3 + 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229904.peg.157 CDS CP001733.2 146986 148161 1 + 1176 Cof protein - none -
fig|6666666.229904.peg.158 CDS CP001733.2 148453 149703 1 + 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229904.peg.159 CDS CP001733.2 149829 150548 3 + 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229904.peg.160 CDS CP001733.2 150566 150709 2 + 144 hypothetical protein - none -
fig|6666666.229904.peg.161 CDS CP001733.2 150851 153238 2 + 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229904.peg.162 CDS CP001733.2 153254 155170 2 + 1917 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229904.peg.163 CDS CP001733.2 155179 156414 1 + 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229904.peg.164 CDS CP001733.2 156417 156710 3 + 294 AagD - none -
fig|6666666.229904.peg.165 CDS CP001733.2 156813 156673 -3 - 141 hypothetical protein - none -
fig|6666666.229904.peg.166 CDS CP001733.2 158153 156828 -2 - 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229904.peg.167 CDS CP001733.2 158324 158956 2 + 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229904.peg.168 CDS CP001733.2 159688 159044 -1 - 645 hypothetical protein - none -
fig|6666666.229904.peg.169 CDS CP001733.2 161229 160201 -3 - 1029 USG protein - none -
fig|6666666.229904.peg.170 CDS CP001733.2 162960 161659 -3 - 1302 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229904.peg.171 CDS CP001733.2 164762 163431 -2 - 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229904.peg.172 CDS CP001733.2 164749 164877 1 + 129 hypothetical protein - none -
fig|6666666.229904.peg.173 CDS CP001733.2 164861 165559 2 + 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229904.peg.174 CDS CP001733.2 166323 165634 -3 - 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229904.peg.175 CDS CP001733.2 166704 167363 3 + 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229904.peg.176 CDS CP001733.2 167512 167360 -1 - 153 hypothetical protein - none -
fig|6666666.229904.peg.177 CDS CP001733.2 168188 167682 -2 - 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229904.peg.178 CDS CP001733.2 168886 168401 -1 - 486 Putative membrane protein - none -
fig|6666666.229904.peg.179 CDS CP001733.2 169494 168889 -3 - 606 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229904.peg.180 CDS CP001733.2 169907 169494 -2 - 414 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229904.peg.181 CDS CP001733.2 170095 169928 -1 - 168 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229904.peg.182 CDS CP001733.2 170224 170604 1 + 381 FIG00782409: hypothetical protein - none -
fig|6666666.229904.peg.183 CDS CP001733.2 173135 171120 -2 - 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229904.peg.184 CDS CP001733.2 173375 173145 -2 - 231 FIG00696102: hypothetical protein - none -
fig|6666666.229904.peg.185 CDS CP001733.2 174042 173479 -3 - 564 Outer membrane protein 18/16 - none -
fig|6666666.229904.peg.186 CDS CP001733.2 174259 177060 1 + 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229904.peg.187 CDS CP001733.2 177075 177197 3 + 123 hypothetical protein - none -
fig|6666666.229904.peg.188 CDS CP001733.2 177231 177371 3 + 141 hypothetical protein - none -
fig|6666666.229904.peg.189 CDS CP001733.2 177447 177794 3 + 348 hypothetical protein - none -
fig|6666666.229904.peg.190 CDS CP001733.2 179714 177900 -2 - 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229904.peg.191 CDS CP001733.2 180517 179741 -1 - 777 Protein HI0205 precursor - none -
fig|6666666.229904.peg.192 CDS CP001733.2 180774 180655 -3 - 120 hypothetical protein - none -
fig|6666666.229904.peg.193 CDS CP001733.2 180796 181722 1 + 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229904.peg.194 CDS CP001733.2 181892 183019 2 + 1128 Fic family protein - none -
fig|6666666.229904.peg.195 CDS CP001733.2 183039 184082 3 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229904.peg.196 CDS CP001733.2 184200 186095 3 + 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229904.peg.197 CDS CP001733.2 186816 186181 -3 - 636 Cytochrome c-type protein NapC - none -
fig|6666666.229904.peg.198 CDS CP001733.2 187279 186830 -1 - 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229904.peg.199 CDS CP001733.2 188198 187317 -2 - 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229904.peg.200 CDS CP001733.2 189058 188198 -1 - 861 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229904.peg.201 CDS CP001733.2 191571 189085 -3 - 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229904.peg.202 CDS CP001733.2 191889 191605 -3 - 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229904.peg.203 CDS CP001733.2 192120 191956 -3 - 165 hypothetical protein - none -
fig|6666666.229904.peg.204 CDS CP001733.2 192166 193869 1 + 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229904.peg.205 CDS CP001733.2 193884 194909 3 + 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229904.peg.206 CDS CP001733.2 194925 195239 3 + 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229904.peg.207 CDS CP001733.2 195424 196272 1 + 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229904.peg.208 CDS CP001733.2 196974 196339 -3 - 636 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229904.peg.209 CDS CP001733.2 197138 197013 -2 - 126 hypothetical protein - none -
fig|6666666.229904.peg.210 CDS CP001733.2 198794 198261 -2 - 534 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229904.peg.211 CDS CP001733.2 199439 198912 -2 - 528 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229904.peg.212 CDS CP001733.2 201605 199503 -2 - 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229904.peg.213 CDS CP001733.2 202190 201720 -2 - 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins)
fig|6666666.229904.peg.214 CDS CP001733.2 202717 202343 -1 - 375 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229904.peg.215 CDS CP001733.2 203244 202945 -3 - 300 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229904.peg.216 CDS CP001733.2 203885 204070 2 + 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229904.peg.217 CDS CP001733.2 204103 204984 1 + 882 Protein rarD - none -
fig|6666666.229904.peg.218 CDS CP001733.2 205779 204979 -3 - 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229904.peg.219 CDS CP001733.2 206334 205783 -3 - 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229904.peg.220 CDS CP001733.2 206887 206339 -1 - 549 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229904.peg.221 CDS CP001733.2 206890 208644 1 + 1755 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229904.peg.222 CDS CP001733.2 208769 209317 2 + 549 FIG00903983: hypothetical protein - none -
fig|6666666.229904.peg.223 CDS CP001733.2 209329 209655 1 + 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229904.peg.224 CDS CP001733.2 209981 209667 -2 - 315 Uncharacterized protein PM1437 - none -
fig|6666666.229904.peg.225 CDS CP001733.2 210024 210899 3 + 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229904.peg.226 CDS CP001733.2 210961 211716 1 + 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229904.peg.227 CDS CP001733.2 212059 213651 1 + 1593 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229904.peg.228 CDS CP001733.2 213688 214785 1 + 1098 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229904.peg.229 CDS CP001733.2 217192 215375 -1 - 1818 ABC transporter ATP-binding protein - none -
fig|6666666.229904.peg.230 CDS CP001733.2 217316 218974 2 + 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229904.peg.231 CDS CP001733.2 219073 218942 -1 - 132 hypothetical protein - none -
fig|6666666.229904.peg.232 CDS CP001733.2 219131 219844 2 + 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229904.peg.233 CDS CP001733.2 219912 220055 3 + 144 hypothetical protein - none -
fig|6666666.229904.peg.234 CDS CP001733.2 220069 220626 1 + 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229904.peg.235 CDS CP001733.2 220655 221938 2 + 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229904.peg.236 CDS CP001733.2 221960 222679 2 + 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229904.peg.237 CDS CP001733.2 222694 223563 1 + 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.238 CDS CP001733.2 223572 224906 3 + 1335 Membrane-associated zinc metalloprotease - none -
fig|6666666.229904.peg.239 CDS CP001733.2 224925 227336 3 + 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229904.peg.240 CDS CP001733.2 227441 228016 2 + 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229904.peg.241 CDS CP001733.2 228016 229038 1 + 1023 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191) - none -
fig|6666666.229904.peg.242 CDS CP001733.2 229175 229585 2 + 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229904.peg.243 CDS CP001733.2 229606 230394 1 + 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.229904.peg.244 CDS CP001733.2 230479 231663 1 + 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) Llipid A biosynthesis cluster
fig|6666666.229904.peg.245 CDS CP001733.2 231656 232255 2 + 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229904.peg.246 CDS CP001733.2 232295 233845 2 + 1551 Putative transport protein - none -
fig|6666666.229904.peg.247 CDS CP001733.2 233849 234163 2 + 315 probable sodium:sulfate symporter - none -
fig|6666666.229904.peg.248 CDS CP001733.2 234174 234782 3 + 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.249 CDS CP001733.2 234793 235425 1 + 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.250 CDS CP001733.2 235425 236354 3 + 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.251 CDS CP001733.2 236444 237025 2 + 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229904.peg.252 CDS CP001733.2 237704 237588 -2 - 117 hypothetical protein - none -
fig|6666666.229904.peg.254 CDS CP001733.2 244501 245454 1 + 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229904.peg.255 CDS CP001733.2 245473 247584 1 + 2112 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229904.peg.256 CDS CP001733.2 248045 247656 -2 - 390 Endoribonuclease L-PSP - none -
fig|6666666.229904.peg.257 CDS CP001733.2 248580 248122 -3 - 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229904.peg.258 CDS CP001733.2 249720 248662 -3 - 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229904.peg.259 CDS CP001733.2 251793 249868 -3 - 1926 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229904.peg.260 CDS CP001733.2 251874 252491 3 + 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229904.peg.261 CDS CP001733.2 252597 255332 3 + 2736 Putative uncharacterized protein ydbH - none -
fig|6666666.229904.peg.262 CDS CP001733.2 255329 255559 2 + 231 hypothetical protein - none -
fig|6666666.229904.peg.263 CDS CP001733.2 256273 256464 1 + 192 Integrase - none -
fig|6666666.229904.peg.264 CDS CP001733.2 256685 257056 2 + 372 Mobile element protein - none -
fig|6666666.229904.peg.265 CDS CP001733.2 257622 258293 3 + 672 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229904.peg.266 CDS CP001733.2 258321 259070 3 + 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229904.peg.267 CDS CP001733.2 259208 260299 2 + 1092 Putative exported protein precursor - none -
fig|6666666.229904.peg.268 CDS CP001733.2 261822 260452 -3 - 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229904.peg.269 CDS CP001733.2 261908 263038 2 + 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229904.peg.270 CDS CP001733.2 263035 263949 1 + 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229904.peg.271 CDS CP001733.2 265892 267256 2 + 1365 lipoprotein, putative - none -
fig|6666666.229904.peg.272 CDS CP001733.2 267381 268676 3 + 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229904.peg.273 CDS CP001733.2 268802 269581 2 + 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229904.peg.274 CDS CP001733.2 269604 270287 3 + 684 ABC-type amino acid transport system, permease component - none -
fig|6666666.229904.peg.275 CDS CP001733.2 270297 271064 3 + 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229904.peg.276 CDS CP001733.2 271356 271069 -3 - 288 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229904.peg.277 CDS CP001733.2 271721 271359 -2 - 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229904.peg.278 CDS CP001733.2 272095 271718 -1 - 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229904.peg.279 CDS CP001733.2 272767 272099 -1 - 669 YheO-like PAS domain - none -
fig|6666666.229904.peg.280 CDS CP001733.2 273572 272847 -2 - 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229904.peg.281 CDS CP001733.2 273667 273882 1 + 216 Protein SlyX - none -
fig|6666666.229904.peg.282 CDS CP001733.2 274671 273943 -3 - 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229904.peg.283 CDS CP001733.2 274830 275729 3 + 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229904.peg.284 CDS CP001733.2 275741 276361 2 + 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229904.peg.285 CDS CP001733.2 278107 276473 -1 - 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229904.peg.286 CDS CP001733.2 279872 278124 -2 - 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229904.peg.287 CDS CP001733.2 281363 280041 -2 - 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229904.peg.288 CDS CP001733.2 281690 282130 2 + 441 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229904.peg.289 CDS CP001733.2 282146 282658 2 + 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229904.peg.290 CDS CP001733.2 282736 283746 1 + 1011 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.291 CDS CP001733.2 283749 284546 3 + 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229904.peg.292 CDS CP001733.2 284725 284594 -1 - 132 hypothetical protein - none -
fig|6666666.229904.peg.293 CDS CP001733.2 284746 285150 1 + 405 hypothetical protein - none -
fig|6666666.229904.peg.294 CDS CP001733.2 286201 285188 -1 - 1014 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229904.peg.295 CDS CP001733.2 286397 286615 2 + 219 FIG074102: hypothetical protein - none -
fig|6666666.229904.peg.296 CDS CP001733.2 286672 287115 1 + 444 Flavoprotein MioC Flavodoxin
fig|6666666.229904.peg.297 CDS CP001733.2 287558 289447 2 + 1890 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229904.peg.298 CDS CP001733.2 290477 289719 -2 - 759 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229904.peg.299 CDS CP001733.2 290728 291090 1 + 363 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229904.peg.300 CDS CP001733.2 291083 291766 2 + 684 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229904.peg.301 CDS CP001733.2 291878 292255 2 + 378 FIG048548: ATP synthase protein I2 - none -
fig|6666666.229904.peg.302 CDS CP001733.2 292280 293068 2 + 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229904.peg.303 CDS CP001733.2 293122 293376 1 + 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) - none -
fig|6666666.229904.peg.304 CDS CP001733.2 293426 293896 2 + 471 ATP synthase F0 sector subunit b - none -
fig|6666666.229904.peg.305 CDS CP001733.2 293910 294458 3 + 549 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229904.peg.306 CDS CP001733.2 294471 296012 3 + 1542 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229904.peg.307 CDS CP001733.2 296028 296897 3 + 870 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229904.peg.308 CDS CP001733.2 296914 298287 1 + 1374 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229904.peg.309 CDS CP001733.2 298329 298757 3 + 429 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.229904.peg.310 CDS CP001733.2 299864 298818 -2 - 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229904.peg.311 CDS CP001733.2 299869 300021 1 + 153 hypothetical protein - none -
fig|6666666.229904.peg.312 CDS CP001733.2 300170 302311 2 + 2142 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229904.peg.313 CDS CP001733.2 302376 303158 3 + 783 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229904.peg.314 CDS CP001733.2 303207 304196 3 + 990 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229904.peg.315 CDS CP001733.2 304405 305358 1 + 954 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229904.peg.316 CDS CP001733.2 305339 305533 2 + 195 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229904.peg.317 CDS CP001733.2 305634 307238 3 + 1605 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229904.peg.318 CDS CP001733.2 308255 307419 -2 - 837 PTS system, mannose-specific IID component - none -
fig|6666666.229904.peg.319 CDS CP001733.2 309074 308271 -2 - 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229904.peg.320 CDS CP001733.2 310084 309086 -1 - 999 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229904.peg.321 CDS CP001733.2 310370 311827 2 + 1458 Permeases of the major facilitator superfamily - none -
fig|6666666.229904.peg.322 CDS CP001733.2 313026 311854 -3 - 1173 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229904.peg.323 CDS CP001733.2 313015 313137 1 + 123 hypothetical protein - none -
fig|6666666.229904.peg.324 CDS CP001733.2 314124 313141 -3 - 984 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229904.peg.325 CDS CP001733.2 314484 314155 -3 - 330 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229904.peg.326 CDS CP001733.2 315733 314537 -1 - 1197 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229904.peg.327 CDS CP001733.2 316810 315743 -1 - 1068 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229904.peg.328 CDS CP001733.2 318325 316814 -1 - 1512 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229904.peg.329 CDS CP001733.2 319383 318385 -3 - 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229904.peg.330 CDS CP001733.2 319641 320960 3 + 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229904.peg.331 CDS CP001733.2 321009 322481 3 + 1473 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229904.peg.332 CDS CP001733.2 323119 323283 1 + 165 hypothetical protein - none -
fig|6666666.229904.peg.333 CDS CP001733.2 323287 324093 1 + 807 Mobile element protein - none -
fig|6666666.229904.peg.334 CDS CP001733.2 325500 324133 -3 - 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.335 CDS CP001733.2 325686 326762 3 + 1077 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229904.peg.336 CDS CP001733.2 327049 326828 -1 - 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229904.peg.337 CDS CP001733.2 327156 327851 3 + 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229904.peg.338 CDS CP001733.2 327964 329127 1 + 1164 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.229904.peg.339 CDS CP001733.2 329192 330271 2 + 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229904.peg.340 CDS CP001733.2 330445 330284 -1 - 162 hypothetical protein - none -
fig|6666666.229904.peg.341 CDS CP001733.2 330479 331621 2 + 1143 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229904.peg.342 CDS CP001733.2 331614 332537 3 + 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229904.peg.343 CDS CP001733.2 333393 332575 -3 - 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229904.peg.344 CDS CP001733.2 333680 334564 2 + 885 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229904.peg.345 CDS CP001733.2 334638 335045 3 + 408 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229904.peg.346 CDS CP001733.2 335096 335512 2 + 417 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229904.peg.347 CDS CP001733.2 336581 335646 -2 - 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229904.peg.348 CDS CP001733.2 337240 336590 -1 - 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229904.peg.349 CDS CP001733.2 338206 337532 -1 - 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229904.peg.350 CDS CP001733.2 338883 338209 -3 - 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229904.peg.351 CDS CP001733.2 339035 339313 2 + 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229904.peg.352 CDS CP001733.2 339313 340008 1 + 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229904.peg.353 CDS CP001733.2 340005 340484 3 + 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229904.peg.354 CDS CP001733.2 340481 341491 2 + 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229904.peg.355 CDS CP001733.2 341524 342264 1 + 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229904.peg.356 CDS CP001733.2 342292 342867 1 + 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229904.peg.357 CDS CP001733.2 342882 343073 3 + 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229904.peg.358 CDS CP001733.2 343090 344259 1 + 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229904.peg.359 CDS CP001733.2 344683 344504 -1 - 180 hypothetical protein - none -
fig|6666666.229904.peg.360 CDS CP001733.2 345717 344956 -3 - 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229904.peg.361 CDS CP001733.2 345816 347099 3 + 1284 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] - none -
fig|6666666.229904.peg.362 CDS CP001733.2 347100 347594 3 + 495 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229904.peg.363 CDS CP001733.2 348368 347643 -2 - 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229904.peg.364 CDS CP001733.2 348457 349500 1 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229904.peg.365 CDS CP001733.2 349938 349597 -3 - 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229904.peg.366 CDS CP001733.2 350042 350959 2 + 918 transcriptional regulator MtrA - none -
fig|6666666.229904.peg.367 CDS CP001733.2 351047 352891 2 + 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229904.peg.368 CDS CP001733.2 355370 352932 -2 - 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.369 CDS CP001733.2 355578 356201 3 + 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229904.peg.370 CDS CP001733.2 356353 356730 1 + 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229904.peg.371 CDS CP001733.2 356717 357043 2 + 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229904.peg.372 CDS CP001733.2 357056 357286 2 + 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229904.peg.373 CDS CP001733.2 357302 357751 2 + 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome LSU bacterial
fig|6666666.229904.peg.374 CDS CP001733.2 357971 359089 2 + 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
YrdC-YciO-Sua5 protein family
fig|6666666.229904.peg.375 CDS CP001733.2 360228 359146 -3 - 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229904.peg.376 CDS CP001733.2 361904 360462 -2 - 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229904.peg.377 CDS CP001733.2 362974 362237 -1 - 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229904.peg.378 CDS CP001733.2 365376 362971 -3 - 2406 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229904.peg.379 CDS CP001733.2 365626 366681 1 + 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229904.peg.380 CDS CP001733.2 366751 367824 1 + 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229904.peg.381 CDS CP001733.2 367824 368312 3 + 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229904.peg.382 CDS CP001733.2 368772 368422 -3 - 351 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.229904.peg.383 CDS CP001733.2 369547 368798 -1 - 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229904.peg.384 CDS CP001733.2 370140 369613 -3 - 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229904.peg.385 CDS CP001733.2 370414 370166 -1 - 249 SSU ribosomal protein S16p - none -
fig|6666666.229904.peg.386 CDS CP001733.2 370600 370755 1 + 156 hypothetical protein - none -
fig|6666666.229904.peg.387 CDS CP001733.2 372195 370909 -3 - 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229904.peg.388 CDS CP001733.2 372773 372225 -2 - 549 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229904.peg.389 CDS CP001733.2 372932 373258 2 + 327 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229904.peg.390 CDS CP001733.2 373552 374127 1 + 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229904.peg.391 CDS CP001733.2 374952 374164 -3 - 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229904.peg.392 CDS CP001733.2 375059 376033 2 + 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229904.peg.393 CDS CP001733.2 376035 376772 3 + 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229904.peg.394 CDS CP001733.2 378915 376942 -3 - 1974 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229904.peg.395 CDS CP001733.2 379639 378980 -1 - 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229904.peg.396 CDS CP001733.2 380049 379756 -3 - 294 COG1872 - none -
fig|6666666.229904.peg.397 CDS CP001733.2 380635 380075 -1 - 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229904.peg.398 CDS CP001733.2 381598 380651 -1 - 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229904.peg.399 CDS CP001733.2 383051 382251 -2 - 801 Orf2 - none -
fig|6666666.229904.peg.400 CDS CP001733.2 386303 383205 -2 - 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229904.peg.401 CDS CP001733.2 387507 386317 -3 - 1191 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229904.peg.402 CDS CP001733.2 388099 387533 -1 - 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229904.peg.403 CDS CP001733.2 389111 388299 -2 - 813 Cell division protein - none -
fig|6666666.229904.peg.404 CDS CP001733.2 391461 389221 -3 - 2241 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229904.peg.405 CDS CP001733.2 391646 392509 2 + 864 Involved in lipopolysaccharide biosynthesis - none -
fig|6666666.229904.peg.406 CDS CP001733.2 393520 392516 -1 - 1005 putative capsular polysaccharide synthesis protein - none -
fig|6666666.229904.peg.407 CDS CP001733.2 394377 393529 -3 - 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229904.peg.408 CDS CP001733.2 394477 394602 1 + 126 hypothetical protein - none -
fig|6666666.229904.peg.409 CDS CP001733.2 394634 394846 2 + 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229904.peg.410 CDS CP001733.2 394909 395601 1 + 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229904.peg.411 CDS CP001733.2 395602 396624 1 + 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229904.peg.412 CDS CP001733.2 396634 397686 1 + 1053 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229904.peg.413 CDS CP001733.2 398546 397689 -2 - 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229904.peg.414 CDS CP001733.2 398756 398586 -2 - 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229904.peg.415 CDS CP001733.2 398941 398768 -1 - 174 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.229904.peg.416 CDS CP001733.2 399872 399213 -2 - 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229904.peg.417 CDS CP001733.2 400051 399923 -1 - 129 hypothetical protein - none -
fig|6666666.229904.peg.418 CDS CP001733.2 400050 401249 3 + 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229904.peg.419 CDS CP001733.2 401318 401773 2 + 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229904.peg.420 CDS CP001733.2 401773 402372 1 + 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229904.peg.421 CDS CP001733.2 402392 402610 2 + 219 FIG00696234: hypothetical protein - none -
fig|6666666.229904.peg.422 CDS CP001733.2 402648 403292 3 + 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229904.peg.423 CDS CP001733.2 404795 403425 -2 - 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229904.peg.424 CDS CP001733.2 405735 404890 -3 - 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229904.peg.425 CDS CP001733.2 408397 405830 -1 - 2568 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229904.peg.426 CDS CP001733.2 408531 409340 3 + 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229904.peg.427 CDS CP001733.2 409351 409869 1 + 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229904.peg.428 CDS CP001733.2 409866 410390 3 + 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229904.peg.429 CDS CP001733.2 410390 410782 2 + 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229904.peg.430 CDS CP001733.2 410802 412211 3 + 1410 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229904.peg.431 CDS CP001733.2 412425 412952 3 + 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229904.peg.432 CDS CP001733.2 412976 414064 2 + 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229904.peg.433 CDS CP001733.2 414067 414921 1 + 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229904.peg.434 CDS CP001733.2 415506 415027 -3 - 480 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229904.peg.435 CDS CP001733.2 415677 418508 3 + 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229904.peg.436 CDS CP001733.2 419026 418577 -1 - 450 Mercuric resistance operon regulatory protein - none -
fig|6666666.229904.peg.437 CDS CP001733.2 419407 419096 -1 - 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229904.peg.438 CDS CP001733.2 419499 419816 3 + 318 hypothetical protein - none -
fig|6666666.229904.peg.439 CDS CP001733.2 419826 422588 3 + 2763 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229904.peg.440 CDS CP001733.2 422665 423069 1 + 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229904.peg.441 CDS CP001733.2 424595 423561 -2 - 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229904.peg.442 CDS CP001733.2 425098 424595 -1 - 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
Lipopolysaccharide assembly
fig|6666666.229904.peg.443 CDS CP001733.2 425087 425215 2 + 129 hypothetical protein - none -
fig|6666666.229904.peg.444 CDS CP001733.2 427828 425240 -1 - 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229904.peg.445 CDS CP001733.2 427995 427870 -3 - 126 hypothetical protein - none -
fig|6666666.229904.peg.446 CDS CP001733.2 428581 427949 -1 - 633 FIG00696423: hypothetical protein - none -
fig|6666666.229904.peg.447 CDS CP001733.2 428902 428609 -1 - 294 Uncharacterized protein HI0073 - none -
fig|6666666.229904.peg.448 CDS CP001733.2 429296 428886 -2 - 411 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229904.peg.449 CDS CP001733.2 430211 429384 -2 - 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229904.peg.450 CDS CP001733.2 431090 430227 -2 - 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229904.peg.451 CDS CP001733.2 432101 431169 -2 - 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229904.peg.452 CDS CP001733.2 432704 432168 -2 - 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229904.peg.453 CDS CP001733.2 433253 432843 -2 - 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229904.peg.454 CDS CP001733.2 433366 433977 1 + 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229904.peg.455 CDS CP001733.2 434001 435368 3 + 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229904.peg.456 CDS CP001733.2 435590 436339 2 + 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229904.peg.457 CDS CP001733.2 436860 436453 -3 - 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229904.peg.458 CDS CP001733.2 436999 438123 1 + 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229904.peg.459 CDS CP001733.2 438138 438968 3 + 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229904.peg.460 CDS CP001733.2 439205 439438 2 + 234 hypothetical protein - none -
fig|6666666.229904.peg.461 CDS CP001733.2 440968 439589 -1 - 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229904.peg.462 CDS CP001733.2 441122 441916 2 + 795 FIG001154: CcsA-related protein - none -
fig|6666666.229904.peg.463 CDS CP001733.2 441991 443253 1 + 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229904.peg.464 CDS CP001733.2 443428 443898 1 + 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229904.peg.465 CDS CP001733.2 443902 444348 1 + 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229904.peg.466 CDS CP001733.2 444358 445062 1 + 705 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229904.peg.467 CDS CP001733.2 446237 446374 2 + 138 hypothetical protein - none -
fig|6666666.229904.peg.468 CDS CP001733.2 446831 446980 2 + 150 hypothetical protein - none -
fig|6666666.229904.peg.469 CDS CP001733.2 447681 447821 3 + 141 hypothetical protein - none -
fig|6666666.229904.peg.470 CDS CP001733.2 447956 450376 2 + 2421 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229904.peg.471 CDS CP001733.2 450387 451010 3 + 624 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3) - none -
fig|6666666.229904.peg.472 CDS CP001733.2 451012 451851 1 + 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.5.3) - none -
fig|6666666.229904.peg.473 CDS CP001733.2 451899 452513 3 + 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229904.peg.474 CDS CP001733.2 452527 452688 1 + 162 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229904.peg.475 CDS CP001733.2 452880 453785 3 + 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229904.peg.476 CDS CP001733.2 453835 454095 1 + 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229904.peg.477 CDS CP001733.2 454262 454438 2 + 177 hypothetical protein - none -
fig|6666666.229904.peg.478 CDS CP001733.2 454643 455347 2 + 705 hypothetical protein - none -
fig|6666666.229904.peg.479 CDS CP001733.2 455429 457510 2 + 2082 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229904.peg.480 CDS CP001733.2 458744 457722 -2 - 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229904.peg.481 CDS CP001733.2 459527 458763 -2 - 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229904.peg.482 CDS CP001733.2 460227 459565 -3 - 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229904.peg.483 CDS CP001733.2 460455 460231 -3 - 225 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229904.peg.484 CDS CP001733.2 461730 460858 -3 - 873 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229904.peg.485 CDS CP001733.2 462214 461798 -1 - 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229904.peg.486 CDS CP001733.2 462886 462227 -1 - 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229904.peg.487 CDS CP001733.2 462925 463515 1 + 591 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229904.peg.488 CDS CP001733.2 464401 463520 -1 - 882 Transcriptional regulator, AraC family - none -
fig|6666666.229904.peg.489 CDS CP001733.2 465098 464472 -2 - 627 membrane protein ykgB - none -
fig|6666666.229904.peg.490 CDS CP001733.2 465467 467473 2 + 2007 oligopeptide transporter - none -
fig|6666666.229904.peg.491 CDS CP001733.2 467535 467963 3 + 429 hypothetical protein - none -
fig|6666666.229904.peg.492 CDS CP001733.2 468001 468810 1 + 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229904.peg.493 CDS CP001733.2 468833 470392 2 + 1560 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.229904.peg.494 CDS CP001733.2 470645 471343 2 + 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.229904.peg.495 CDS CP001733.2 471435 471554 3 + 120 hypothetical protein - none -
fig|6666666.229904.peg.496 CDS CP001733.2 471670 472098 1 + 429 FIG00848466: hypothetical protein - none -
fig|6666666.229904.peg.497 CDS CP001733.2 472213 472905 1 + 693 Aspartate racemase (EC 5.1.1.13) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229904.peg.498 CDS CP001733.2 472918 473172 1 + 255 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229904.peg.499 CDS CP001733.2 473252 473710 2 + 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229904.peg.500 CDS CP001733.2 474245 474099 -2 - 147 hypothetical protein - none -
fig|6666666.229904.peg.501 CDS CP001733.2 474266 475720 2 + 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229904.peg.502 CDS CP001733.2 477375 476131 -3 - 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.503 CDS CP001733.2 478123 477395 -1 - 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.504 CDS CP001733.2 478616 478173 -2 - 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.505 CDS CP001733.2 479832 478609 -3 - 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.506 CDS CP001733.2 480320 479841 -2 - 480 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.507 CDS CP001733.2 482723 480450 -2 - 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.508 CDS CP001733.2 483314 482730 -2 - 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.509 CDS CP001733.2 483757 483311 -1 - 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.510 CDS CP001733.2 484680 483754 -3 - 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.511 CDS CP001733.2 485399 484677 -2 - 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.512 CDS CP001733.2 486760 485399 -1 - 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.513 CDS CP001733.2 487302 486757 -3 - 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.514 CDS CP001733.2 488995 487328 -1 - 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.515 CDS CP001733.2 489246 488995 -3 - 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.516 CDS CP001733.2 489512 489249 -2 - 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.517 CDS CP001733.2 490278 489490 -3 - 789 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.518 CDS CP001733.2 491006 490263 -2 - 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229904.peg.519 CDS CP001733.2 491359 491036 -1 - 324 hypothetical protein - none -
fig|6666666.229904.peg.520 CDS CP001733.2 491387 491812 2 + 426 Excinuclease ATPase subunit - none -
fig|6666666.229904.peg.521 CDS CP001733.2 492626 491913 -2 - 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229904.peg.522 CDS CP001733.2 493530 492640 -3 - 891 Tyrosine recombinase XerC - none -
fig|6666666.229904.peg.523 CDS CP001733.2 494364 493540 -3 - 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229904.peg.524 CDS CP001733.2 494622 494443 -3 - 180 hypothetical protein - none -
fig|6666666.229904.peg.525 CDS CP001733.2 495650 494622 -2 - 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229904.peg.526 CDS CP001733.2 495833 496333 2 + 501 hypothetical protein - none -
fig|6666666.229904.peg.527 CDS CP001733.2 496306 496425 1 + 120 hypothetical protein - none -
fig|6666666.229904.peg.528 CDS CP001733.2 499005 496435 -3 - 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229904.peg.529 CDS CP001733.2 499270 499851 1 + 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229904.peg.530 CDS CP001733.2 501036 499924 -3 - 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229904.peg.531 CDS CP001733.2 502032 501220 -3 - 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229904.peg.532 CDS CP001733.2 502178 502864 2 + 687 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.229904.peg.533 CDS CP001733.2 502981 503565 1 + 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229904.peg.534 CDS CP001733.2 503913 503752 -3 - 162 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Riboflavin synthesis cluster
fig|6666666.229904.peg.535 CDS CP001733.2 505477 504062 -1 - 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229904.peg.536 CDS CP001733.2 505591 507225 1 + 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229904.peg.537 CDS CP001733.2 507652 507837 1 + 186 Mobile element protein - none -
fig|6666666.229904.peg.538 CDS CP001733.2 508369 508614 1 + 246 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.229904.peg.539 CDS CP001733.2 508625 508936 2 + 312 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.229904.peg.540 CDS CP001733.2 509065 509493 1 + 429 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.229904.peg.541 CDS CP001733.2 509848 510240 1 + 393 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.229904.peg.542 CDS CP001733.2 510256 510789 1 + 534 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.229904.peg.543 CDS CP001733.2 510851 511156 2 + 306 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.229904.peg.544 CDS CP001733.2 511172 511672 2 + 501 SSU ribosomal protein S5p (S2e) - none -
fig|6666666.229904.peg.545 CDS CP001733.2 511862 512296 2 + 435 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.229904.peg.546 CDS CP001733.2 512300 513625 2 + 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229904.peg.547 CDS CP001733.2 513651 513764 3 + 114 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.229904.peg.548 CDS CP001733.2 513906 514262 3 + 357 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.229904.peg.549 CDS CP001733.2 514278 514667 3 + 390 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.229904.peg.550 CDS CP001733.2 514697 515317 2 + 621 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.229904.peg.551 CDS CP001733.2 515346 516335 3 + 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229904.peg.552 CDS CP001733.2 516377 516766 2 + 390 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.229904.peg.553 CDS CP001733.2 517168 517335 1 + 168 Mobile element protein - none -
fig|6666666.229904.peg.554 CDS CP001733.2 519004 517775 -1 - 1230 Tyrosine-specific transport protein - none -
fig|6666666.229904.peg.555 CDS CP001733.2 519817 519134 -1 - 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229904.peg.556 CDS CP001733.2 521104 519833 -1 - 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229904.peg.557 CDS CP001733.2 521669 521424 -2 - 246 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229904.peg.558 CDS CP001733.2 521757 521912 3 + 156 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229904.peg.559 CDS CP001733.2 521906 522028 2 + 123 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229904.peg.560 CDS CP001733.2 522059 522274 2 + 216 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229904.peg.561 CDS CP001733.2 522293 523756 2 + 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229904.peg.562 CDS CP001733.2 523756 524268 1 + 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis;
Transport system clustering with HemG
fig|6666666.229904.peg.564 CDS CP001733.2 530186 530413 2 + 228 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229904.peg.565 CDS CP001733.2 530491 530736 1 + 246 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229904.peg.566 CDS CP001733.2 531520 531380 -1 - 141 hypothetical protein - none -
fig|6666666.229904.peg.567 CDS CP001733.2 531870 532043 3 + 174 hypothetical protein - none -
fig|6666666.229904.peg.568 CDS CP001733.2 532085 532198 2 + 114 Mobile element protein - none -
fig|6666666.229904.peg.569 CDS CP001733.2 532331 532840 2 + 510 Mobile element protein - none -
fig|6666666.229904.peg.570 CDS CP001733.2 532936 533520 1 + 585 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229904.peg.571 CDS CP001733.2 534062 534211 2 + 150 Integral membrane protein - none -
fig|6666666.229904.peg.572 CDS CP001733.2 534258 534455 3 + 198 hypothetical protein - none -
fig|6666666.229904.peg.573 CDS CP001733.2 535464 534427 -3 - 1038 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229904.peg.574 CDS CP001733.2 537064 535646 -1 - 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229904.peg.575 CDS CP001733.2 537294 537776 3 + 483 FxsA protein - none -
fig|6666666.229904.peg.576 CDS CP001733.2 537863 538153 2 + 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229904.peg.577 CDS CP001733.2 538274 539917 2 + 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229904.peg.578 CDS CP001733.2 540863 540006 -2 - 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.229904.peg.579 CDS CP001733.2 542038 541280 -1 - 759 Mobile element protein - none -
fig|6666666.229904.peg.580 CDS CP001733.2 542253 542080 -3 - 174 hypothetical protein - none -
fig|6666666.229904.peg.581 CDS CP001733.2 542452 542321 -1 - 132 hypothetical protein - none -
fig|6666666.229904.peg.582 CDS CP001733.2 542881 542525 -1 - 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229904.peg.583 CDS CP001733.2 545137 542906 -1 - 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229904.peg.584 CDS CP001733.2 546463 545147 -1 - 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229904.peg.585 CDS CP001733.2 547151 546465 -2 - 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229904.peg.586 CDS CP001733.2 548296 547448 -1 - 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229904.peg.587 CDS CP001733.2 549173 548451 -2 - 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229904.peg.588 CDS CP001733.2 549637 549248 -1 - 390 Patatin-like phospholipase - none -
fig|6666666.229904.peg.589 CDS CP001733.2 550643 549756 -2 - 888 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229904.peg.590 CDS CP001733.2 551534 550671 -2 - 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229904.peg.591 CDS CP001733.2 551652 552368 3 + 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229904.peg.592 CDS CP001733.2 552378 553022 3 + 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229904.peg.593 CDS CP001733.2 553104 553979 3 + 876 DnaJ-like protein DjlA - none -
fig|6666666.229904.peg.594 CDS CP001733.2 553983 554987 3 + 1005 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229904.peg.595 CDS CP001733.2 556031 554973 -2 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229904.peg.596 CDS CP001733.2 557567 556047 -2 - 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229904.peg.597 CDS CP001733.2 558646 557648 -1 - 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229904.peg.598 CDS CP001733.2 559206 558865 -3 - 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229904.peg.599 CDS CP001733.2 560004 559237 -3 - 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229904.peg.600 CDS CP001733.2 560170 561360 1 + 1191 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229904.peg.601 CDS CP001733.2 561338 561616 2 + 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229904.peg.602 CDS CP001733.2 561619 562698 1 + 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229904.peg.603 CDS CP001733.2 563093 563218 2 + 126 hypothetical protein - none -
fig|6666666.229904.peg.604 CDS CP001733.2 563792 563199 -2 - 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229904.peg.605 CDS CP001733.2 563896 564207 1 + 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229904.peg.606 CDS CP001733.2 564217 564333 1 + 117 hypothetical protein - none -
fig|6666666.229904.peg.607 CDS CP001733.2 564371 564538 2 + 168 hypothetical protein - none -
fig|6666666.229904.peg.608 CDS CP001733.2 564563 565903 2 + 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.609 CDS CP001733.2 565906 567141 1 + 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.610 CDS CP001733.2 567134 567919 2 + 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.611 CDS CP001733.2 567919 568548 1 + 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.612 CDS CP001733.2 568552 569148 1 + 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.613 CDS CP001733.2 569160 570395 3 + 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.614 CDS CP001733.2 570400 570549 1 + 150 hypothetical protein - none -
fig|6666666.229904.peg.615 CDS CP001733.2 570546 571634 3 + 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229904.peg.616 CDS CP001733.2 571713 571970 3 + 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.617 CDS CP001733.2 572230 573381 1 + 1152 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229904.peg.618 CDS CP001733.2 573834 573950 3 + 117 hypothetical protein - none -
fig|6666666.229904.peg.619 CDS CP001733.2 574019 575329 2 + 1311 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.229904.peg.620 CDS CP001733.2 575844 575425 -3 - 420 Putative Holliday junction resolvase YqgF - none -
fig|6666666.229904.peg.621 CDS CP001733.2 576401 575844 -2 - 558 UPF0301 protein YqgE - none -
fig|6666666.229904.peg.622 CDS CP001733.2 577053 576418 -3 - 636 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229904.peg.623 CDS CP001733.2 577151 577282 2 + 132 hypothetical protein - none -
fig|6666666.229904.peg.624 CDS CP001733.2 577556 577239 -2 - 318 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229904.peg.625 CDS CP001733.2 578597 577710 -2 - 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229904.peg.626 CDS CP001733.2 580037 578673 -2 - 1365 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229904.peg.627 CDS CP001733.2 580251 580069 -3 - 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229904.peg.628 CDS CP001733.2 582998 580374 -2 - 2625 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229904.peg.629 CDS CP001733.2 583623 583198 -3 - 426 Universal stress protein A Universal stress protein family
fig|6666666.229904.peg.630 CDS CP001733.2 583742 584599 2 + 858 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229904.peg.631 CDS CP001733.2 585686 584697 -2 - 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229904.peg.632 CDS CP001733.2 587684 585945 -2 - 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229904.peg.633 CDS CP001733.2 587913 587689 -3 - 225 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229904.peg.634 CDS CP001733.2 588040 589065 1 + 1026 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229904.peg.635 CDS CP001733.2 589131 589544 3 + 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229904.peg.636 CDS CP001733.2 589586 590281 2 + 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229904.peg.637 CDS CP001733.2 590326 591714 1 + 1389 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229904.peg.638 CDS CP001733.2 592978 591770 -1 - 1209 Sodium/glutamate symport protein - none -
fig|6666666.229904.peg.639 CDS CP001733.2 593578 593144 -1 - 435 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229904.peg.640 CDS CP001733.2 594405 593575 -3 - 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229904.peg.641 CDS CP001733.2 594875 594402 -2 - 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229904.peg.642 CDS CP001733.2 595546 594878 -1 - 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229904.peg.643 CDS CP001733.2 595672 597171 1 + 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.229904.peg.644 CDS CP001733.2 597510 598325 3 + 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229904.peg.645 CDS CP001733.2 599296 598403 -1 - 894 Transcriptional regulator, LysR family - none -
fig|6666666.229904.peg.646 CDS CP001733.2 599655 600500 3 + 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229904.peg.647 CDS CP001733.2 600564 601544 3 + 981 Aldo-keto reductase - none -
fig|6666666.229904.peg.648 CDS CP001733.2 601770 602825 3 + 1056 Carboxylesterase type B - none -
fig|6666666.229904.peg.649 CDS CP001733.2 603093 603425 3 + 333 Carboxylesterase type B - none -
fig|6666666.229904.peg.650 CDS CP001733.2 603562 604671 1 + 1110 Putative exported protein precursor - none -
fig|6666666.229904.peg.651 CDS CP001733.2 605700 604810 -3 - 891 Transcriptional regulator, LysR family - none -
fig|6666666.229904.peg.652 CDS CP001733.2 605770 605889 1 + 120 hypothetical protein - none -
fig|6666666.229904.peg.653 CDS CP001733.2 605902 606864 1 + 963 FIG01220323: hypothetical protein - none -
fig|6666666.229904.peg.654 CDS CP001733.2 608848 607016 -1 - 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229904.peg.655 CDS CP001733.2 609700 608903 -1 - 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229904.peg.656 CDS CP001733.2 610098 609826 -3 - 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229904.peg.657 CDS CP001733.2 610855 610265 -1 - 591 FIG01200173: hypothetical protein - none -
fig|6666666.229904.peg.658 CDS CP001733.2 611937 610873 -3 - 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229904.peg.659 CDS CP001733.2 612825 611950 -3 - 876 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229904.peg.660 CDS CP001733.2 613518 612874 -3 - 645 converved hypothetical protein - none -
fig|6666666.229904.peg.661 CDS CP001733.2 613637 613515 -2 - 123 hypothetical protein - none -
fig|6666666.229904.peg.662 CDS CP001733.2 613776 615392 3 + 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.229904.peg.663 CDS CP001733.2 617004 615457 -3 - 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229904.peg.664 CDS CP001733.2 620888 617007 -2 - 3882 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229904.peg.665 CDS CP001733.2 622775 620916 -2 - 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229904.peg.666 CDS CP001733.2 623471 622842 -2 - 630 Nitrate/nitrite response regulator protein - none -
fig|6666666.229904.peg.667 CDS CP001733.2 625982 623481 -2 - 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229904.peg.668 CDS CP001733.2 626138 627064 2 + 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229904.peg.669 CDS CP001733.2 627077 627823 2 + 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229904.peg.670 CDS CP001733.2 627852 629237 3 + 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229904.peg.671 CDS CP001733.2 629250 630500 3 + 1251 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229904.peg.672 CDS CP001733.2 631304 630567 -2 - 738 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229904.peg.673 CDS CP001733.2 631566 631847 3 + 282 hypothetical protein - none -
fig|6666666.229904.peg.674 CDS CP001733.2 632033 632620 2 + 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229904.peg.675 CDS CP001733.2 632635 632826 1 + 192 hypothetical protein - none -
fig|6666666.229904.peg.676 CDS CP001733.2 633391 632909 -1 - 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229904.peg.677 CDS CP001733.2 633602 633736 2 + 135 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229904.peg.678 CDS CP001733.2 634725 634126 -3 - 600 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229904.peg.679 CDS CP001733.2 635723 634737 -2 - 987 Sodium-dependent transporter - none -
fig|6666666.229904.peg.680 CDS CP001733.2 635907 635773 -3 - 135 hypothetical protein - none -
fig|6666666.229904.peg.681 CDS CP001733.2 636205 635921 -1 - 285 Sodium-dependent transporter - none -
fig|6666666.229904.peg.682 CDS CP001733.2 636315 637202 3 + 888 RuBisCO operon transcriptional regulator CO2 uptake, carboxysome
fig|6666666.229904.peg.683 CDS CP001733.2 637419 639734 3 + 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229904.peg.684 CDS CP001733.2 641239 639782 -1 - 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229904.peg.685 CDS CP001733.2 642273 641245 -3 - 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229904.peg.686 CDS CP001733.2 643776 642289 -3 - 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229904.peg.687 CDS CP001733.2 643939 644880 1 + 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229904.peg.688 CDS CP001733.2 645354 644950 -3 - 405 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229904.peg.689 CDS CP001733.2 646135 645356 -1 - 780 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229904.peg.690 CDS CP001733.2 646868 647782 2 + 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229904.peg.691 CDS CP001733.2 650257 647837 -1 - 2421 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229904.peg.692 CDS CP001733.2 652243 650354 -1 - 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229904.peg.693 CDS CP001733.2 652554 652240 -3 - 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229904.peg.694 CDS CP001733.2 652677 652796 3 + 120 hypothetical protein - none -
fig|6666666.229904.peg.695 CDS CP001733.2 652814 654064 2 + 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229904.peg.696 CDS CP001733.2 654722 654117 -2 - 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229904.peg.697 CDS CP001733.2 654921 655481 3 + 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229904.peg.698 CDS CP001733.2 655547 657889 2 + 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229904.peg.699 CDS CP001733.2 658442 657978 -2 - 465 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229904.peg.700 CDS CP001733.2 658557 660017 3 + 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229904.peg.701 CDS CP001733.2 660852 660097 -3 - 756 Short chain dehydrogenase - none -
fig|6666666.229904.peg.702 CDS CP001733.2 661458 660946 -3 - 513 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229904.peg.703 CDS CP001733.2 661976 661539 -2 - 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229904.peg.704 CDS CP001733.2 662942 661986 -2 - 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229904.peg.705 CDS CP001733.2 663609 663025 -3 - 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229904.peg.706 CDS CP001733.2 664223 663648 -2 - 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229904.peg.707 CDS CP001733.2 664610 664356 -2 - 255 YgfY COG2938 - none -
fig|6666666.229904.peg.708 CDS CP001733.2 664838 664650 -2 - 189 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229904.peg.709 CDS CP001733.2 666638 664923 -2 - 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229904.peg.710 CDS CP001733.2 666782 668176 2 + 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229904.peg.711 CDS CP001733.2 668173 670032 1 + 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229904.peg.712 CDS CP001733.2 670078 670980 1 + 903 hypothetical protein - none -
fig|6666666.229904.peg.713 CDS CP001733.2 671315 671019 -2 - 297 Membrane protein, MgtC/SapB family - none -
fig|6666666.229904.peg.714 CDS CP001733.2 671469 671275 -3 - 195 hypothetical protein - none -
fig|6666666.229904.peg.715 CDS CP001733.2 671746 671471 -1 - 276 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229904.peg.716 CDS CP001733.2 672152 673654 2 + 1503 Sodium-dependent transporter - none -
fig|6666666.229904.peg.717 CDS CP001733.2 674478 674594 3 + 117 hypothetical protein - none -
fig|6666666.229904.peg.718 CDS CP001733.2 674638 674874 1 + 237 Mobile element protein - none -
fig|6666666.229904.peg.719 CDS CP001733.2 675126 675299 3 + 174 Mobile element protein - none -
fig|6666666.229904.peg.720 CDS CP001733.2 677489 675852 -2 - 1638 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229904.peg.721 CDS CP001733.2 679503 678742 -3 - 762 Flp pilus assembly protein TadD, contains TPR repeat Widespread colonization island
fig|6666666.229904.peg.722 CDS CP001733.2 680359 679493 -1 - 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229904.peg.723 CDS CP001733.2 681243 680356 -3 - 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229904.peg.724 CDS CP001733.2 682523 681243 -2 - 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229904.peg.725 CDS CP001733.2 683661 682537 -3 - 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229904.peg.726 CDS CP001733.2 684180 683677 -3 - 504 Flp pilus assembly protein RcpB Widespread colonization island
fig|6666666.229904.peg.727 CDS CP001733.2 685439 684177 -2 - 1263 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229904.peg.728 CDS CP001733.2 686385 685561 -3 - 825 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229904.peg.729 CDS CP001733.2 686612 686436 -2 - 177 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229904.peg.730 CDS CP001733.2 687435 687205 -3 - 231 Flp pilus assembly protein, pilin Flp Widespread colonization island
fig|6666666.229904.peg.731 CDS CP001733.2 687401 687514 2 + 114 hypothetical protein - none -
fig|6666666.229904.peg.732 CDS CP001733.2 688002 688466 3 + 465 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229904.peg.733 CDS CP001733.2 688628 689326 2 + 699 unknown - none -
fig|6666666.229904.peg.734 CDS CP001733.2 689330 691252 2 + 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229904.peg.735 CDS CP001733.2 691293 691466 3 + 174 hypothetical protein - none -
fig|6666666.229904.peg.736 CDS CP001733.2 691594 695052 1 + 3459 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229904.peg.737 CDS CP001733.2 695154 695738 3 + 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229904.peg.738 CDS CP001733.2 695879 696613 2 + 735 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229904.peg.739 CDS CP001733.2 696634 697353 1 + 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229904.peg.740 CDS CP001733.2 697358 698020 2 + 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229904.peg.741 CDS CP001733.2 698020 698706 1 + 687 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229904.peg.742 CDS CP001733.2 699248 700846 2 + 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229904.peg.743 CDS CP001733.2 701110 701568 1 + 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229904.peg.744 CDS CP001733.2 701678 702646 2 + 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229904.peg.745 CDS CP001733.2 702646 702963 1 + 318 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229904.peg.746 CDS CP001733.2 702981 704804 3 + 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229904.peg.747 CDS CP001733.2 704822 706288 2 + 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229904.peg.748 CDS CP001733.2 706295 707674 2 + 1380 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229904.peg.749 CDS CP001733.2 707668 708753 1 + 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229904.peg.750 CDS CP001733.2 708780 710084 3 + 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229904.peg.751 CDS CP001733.2 710099 711289 2 + 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229904.peg.752 CDS CP001733.2 711330 712394 3 + 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229904.peg.753 CDS CP001733.2 712465 713895 1 + 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229904.peg.754 CDS CP001733.2 713908 714837 1 + 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229904.peg.755 CDS CP001733.2 714834 715601 3 + 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229904.peg.756 CDS CP001733.2 715626 716906 3 + 1281 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229904.peg.757 CDS CP001733.2 716990 718273 2 + 1284 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229904.peg.758 CDS CP001733.2 718311 719228 3 + 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) - none -
fig|6666666.229904.peg.759 CDS CP001733.2 719426 720160 2 + 735 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229904.peg.760 CDS CP001733.2 720135 720587 3 + 453 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229904.peg.761 CDS CP001733.2 720721 722601 1 + 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229904.peg.762 CDS CP001733.2 722667 723011 3 + 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352
fig|6666666.229904.peg.763 CDS CP001733.2 723148 724281 1 + 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229904.peg.764 CDS CP001733.2 724283 724963 2 + 681 FIG009095: D,D-carboxypeptidase family protein CBSS-584.1.peg.1352
fig|6666666.229904.peg.765 CDS CP001733.2 725209 725832 1 + 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229904.peg.766 CDS CP001733.2 725883 726707 3 + 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229904.peg.767 CDS CP001733.2 728039 727215 -2 - 825 FIG00711691: hypothetical protein - none -
fig|6666666.229904.peg.768 CDS CP001733.2 728476 728012 -1 - 465 FIG00710847: hypothetical protein - none -
fig|6666666.229904.peg.769 CDS CP001733.2 728660 728797 2 + 138 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229904.peg.770 CDS CP001733.2 728831 729535 2 + 705 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229904.peg.771 CDS CP001733.2 729653 730867 2 + 1215 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.229904.peg.772 CDS CP001733.2 731974 730946 -1 - 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.773 CDS CP001733.2 732245 734392 2 + 2148 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229904.peg.774 CDS CP001733.2 734833 734489 -1 - 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229904.peg.775 CDS CP001733.2 735235 734843 -1 - 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229904.peg.776 CDS CP001733.2 736017 735247 -3 - 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229904.peg.777 CDS CP001733.2 737830 736022 -1 - 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229904.peg.778 CDS CP001733.2 738138 739109 3 + 972 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229904.peg.779 CDS CP001733.2 739942 739175 -1 - 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229904.peg.780 CDS CP001733.2 740925 739942 -3 - 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229904.peg.781 CDS CP001733.2 741914 740925 -2 - 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229904.peg.782 CDS CP001733.2 742807 741914 -1 - 894 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229904.peg.783 CDS CP001733.2 743947 742877 -1 - 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229904.peg.784 CDS CP001733.2 744018 744461 3 + 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229904.peg.785 CDS CP001733.2 744546 745148 3 + 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229904.peg.786 CDS CP001733.2 745180 747117 1 + 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229904.peg.787 CDS CP001733.2 747131 747262 2 + 132 hypothetical protein - none -
fig|6666666.229904.peg.788 CDS CP001733.2 747290 747628 2 + 339 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.229904.peg.789 CDS CP001733.2 748104 748691 3 + 588 Integrase - none -
fig|6666666.229904.peg.790 CDS CP001733.2 748660 748965 1 + 306 hypothetical protein - none -
fig|6666666.229904.peg.791 CDS CP001733.2 749546 749800 2 + 255 hypothetical protein - none -
fig|6666666.229904.peg.792 CDS CP001733.2 750829 750056 -1 - 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229904.peg.793 CDS CP001733.2 751115 750807 -2 - 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229904.peg.794 CDS CP001733.2 753364 751148 -1 - 2217 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229904.peg.795 CDS CP001733.2 753866 753570 -2 - 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229904.peg.796 CDS CP001733.2 754339 753869 -1 - 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229904.peg.797 CDS CP001733.2 754894 754343 -1 - 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229904.peg.798 CDS CP001733.2 755658 754900 -3 - 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229904.peg.799 CDS CP001733.2 755930 756154 2 + 225 hypothetical protein - none -
fig|6666666.229904.peg.800 CDS CP001733.2 756158 756577 2 + 420 Outer membrane protein W precursor - none -
fig|6666666.229904.peg.801 CDS CP001733.2 758320 756644 -1 - 1677 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229904.peg.802 CDS CP001733.2 759311 758394 -2 - 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229904.peg.803 CDS CP001733.2 759484 759356 -1 - 129 hypothetical protein - none -
fig|6666666.229904.peg.804 CDS CP001733.2 759452 760030 2 + 579 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229904.peg.805 CDS CP001733.2 763212 760141 -3 - 3072 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229904.peg.806 CDS CP001733.2 765420 763402 -3 - 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229904.peg.807 CDS CP001733.2 765590 766810 2 + 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229904.peg.808 CDS CP001733.2 766925 766791 -2 - 135 hypothetical protein - none -
fig|6666666.229904.peg.809 CDS CP001733.2 766951 768810 1 + 1860 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229904.peg.810 CDS CP001733.2 769894 768884 -1 - 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229904.peg.811 CDS CP001733.2 771451 769913 -1 - 1539 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229904.peg.812 CDS CP001733.2 772518 771526 -3 - 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229904.peg.813 CDS CP001733.2 773746 772733 -1 - 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229904.peg.814 CDS CP001733.2 773998 775041 1 + 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229904.peg.815 CDS CP001733.2 775108 776262 1 + 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229904.peg.816 CDS CP001733.2 776256 777287 3 + 1032 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229904.peg.817 CDS CP001733.2 779051 777552 -2 - 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229904.peg.818 CDS CP001733.2 780763 779330 -1 - 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229904.peg.819 CDS CP001733.2 782162 780750 -2 - 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229904.peg.820 CDS CP001733.2 783858 782356 -3 - 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229904.peg.821 CDS CP001733.2 784748 783873 -2 - 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229904.peg.822 CDS CP001733.2 785032 784745 -1 - 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229904.peg.823 CDS CP001733.2 786079 785072 -1 - 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229904.peg.824 CDS CP001733.2 786245 786117 -2 - 129 hypothetical protein - none -
fig|6666666.229904.peg.825 CDS CP001733.2 786325 787221 1 + 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229904.peg.826 CDS CP001733.2 787613 789157 2 + 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229904.peg.827 CDS CP001733.2 789438 789220 -3 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229904.peg.828 CDS CP001733.2 789493 789615 1 + 123 hypothetical protein - none -
fig|6666666.229904.peg.829 CDS CP001733.2 789658 790965 1 + 1308 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229904.peg.830 CDS CP001733.2 790977 791402 3 + 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229904.peg.831 CDS CP001733.2 791538 792683 3 + 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229904.peg.832 CDS CP001733.2 792676 792795 1 + 120 hypothetical protein - none -
fig|6666666.229904.peg.833 CDS CP001733.2 793885 792773 -1 - 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229904.peg.834 CDS CP001733.2 794058 796118 3 + 2061 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229904.peg.835 CDS CP001733.2 796446 796252 -3 - 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229904.peg.836 CDS CP001733.2 796787 796446 -2 - 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229904.peg.837 CDS CP001733.2 798658 796799 -1 - 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229904.peg.838 CDS CP001733.2 799200 798679 -3 - 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229904.peg.839 CDS CP001733.2 799535 799212 -2 - 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229904.peg.840 CDS CP001733.2 800050 799667 -1 - 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229904.peg.841 CDS CP001733.2 801324 800110 -3 - 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229904.peg.842 CDS CP001733.2 801851 801378 -2 - 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229904.peg.843 CDS CP001733.2 802654 801929 -1 - 726 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Bacteria
fig|6666666.229904.peg.844 CDS CP001733.2 802805 803605 2 + 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229904.peg.845 CDS CP001733.2 805769 803658 -2 - 2112 unknown - none -
fig|6666666.229904.peg.846 CDS CP001733.2 807094 806048 -1 - 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229904.peg.847 CDS CP001733.2 809167 807110 -1 - 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229904.peg.848 CDS CP001733.2 810115 809195 -1 - 921 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229904.peg.849 CDS CP001733.2 811440 810400 -3 - 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229904.peg.850 CDS CP001733.2 811749 812399 3 + 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229904.peg.851 CDS CP001733.2 812409 812993 3 + 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229904.peg.852 CDS CP001733.2 812994 814196 3 + 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229904.peg.853 CDS CP001733.2 814198 815394 1 + 1197 Sugar efflux transporter SotB - none -
fig|6666666.229904.peg.854 CDS CP001733.2 816996 815464 -3 - 1533 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229904.peg.855 CDS CP001733.2 817284 818267 3 + 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229904.peg.856 CDS CP001733.2 818290 818580 1 + 291 hypothetical protein - none -
fig|6666666.229904.peg.857 CDS CP001733.2 819943 818645 -1 - 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229904.peg.858 CDS CP001733.2 820996 820031 -1 - 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229904.peg.859 CDS CP001733.2 822530 821010 -2 - 1521 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229904.peg.860 CDS CP001733.2 822671 824146 2 + 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229904.peg.861 CDS CP001733.2 824263 824910 1 + 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229904.peg.862 CDS CP001733.2 824926 825624 1 + 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229904.peg.863 CDS CP001733.2 825697 826068 1 + 372 Mobile element protein - none -
fig|6666666.229904.peg.864 CDS CP001733.2 826271 826597 2 + 327 Mobile element protein - none -
fig|6666666.229904.peg.865 CDS CP001733.2 827508 826966 -3 - 543 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229904.peg.866 CDS CP001733.2 827802 827981 3 + 180 Haemophilus-specific protein, uncharacterized - none -
fig|6666666.229904.peg.867 CDS CP001733.2 828295 828474 1 + 180 hypothetical protein - none -
fig|6666666.229904.peg.868 CDS CP001733.2 829047 829301 3 + 255 hypothetical protein - none -
fig|6666666.229904.peg.869 CDS CP001733.2 829304 829648 2 + 345 Programmed cell death toxin MazF - none -
fig|6666666.229904.peg.870 CDS CP001733.2 830217 830885 3 + 669 Cytolethal distending toxin subunit A Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229904.peg.871 CDS CP001733.2 830900 831751 2 + 852 Cytolethal distending toxin subunit B Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229904.peg.872 CDS CP001733.2 831762 832322 3 + 561 Cytolethal distending toxin subunit C Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229904.peg.873 CDS CP001733.2 833683 833540 -1 - 144 hypothetical protein - none -
fig|6666666.229904.peg.874 CDS CP001733.2 833852 833691 -2 - 162 Protein with ParB-like nuclease domain in PFGI-1-like cluster - none -
fig|6666666.229904.peg.875 CDS CP001733.2 835133 834576 -2 - 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.876 CDS CP001733.2 835388 836578 2 + 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229904.peg.877 CDS CP001733.2 836792 837844 2 + 1053 Outer membrane protein P2 precursor (OMP P2) - none -
fig|6666666.229904.peg.878 CDS CP001733.2 837988 838245 1 + 258 hypothetical protein - none -
fig|6666666.229904.peg.879 CDS CP001733.2 838245 838592 3 + 348 Programmed cell death toxin ChpB - none -
fig|6666666.229904.peg.880 CDS CP001733.2 839797 838670 -1 - 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229904.peg.881 CDS CP001733.2 842133 840232 -3 - 1902 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229904.peg.882 CDS CP001733.2 842419 843852 1 + 1434 Putative GTP-binding protein YdgA - none -
fig|6666666.229904.peg.883 CDS CP001733.2 845945 844212 -2 - 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229904.peg.884 CDS CP001733.2 846042 846629 3 + 588 Protein yecM - none -
fig|6666666.229904.peg.885 CDS CP001733.2 846671 847126 2 + 456 Outer membrane lipoprotein - none -
fig|6666666.229904.peg.886 CDS CP001733.2 847266 848348 3 + 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229904.peg.887 CDS CP001733.2 848388 849287 3 + 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229904.peg.888 CDS CP001733.2 849297 850151 3 + 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation
fig|6666666.229904.peg.889 CDS CP001733.2 850331 850840 2 + 510 probable lipoprotein NlpC - none -
fig|6666666.229904.peg.890 CDS CP001733.2 851488 851237 -1 - 252 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229904.peg.891 CDS CP001733.2 851572 852234 1 + 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229904.peg.892 CDS CP001733.2 852801 852256 -3 - 546 FIG00696317: hypothetical protein - none -
fig|6666666.229904.peg.893 CDS CP001733.2 853492 853025 -1 - 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229904.peg.894 CDS CP001733.2 854842 853505 -1 - 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229904.peg.895 CDS CP001733.2 855698 854871 -2 - 828 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229904.peg.896 CDS CP001733.2 856950 855868 -3 - 1083 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229904.peg.897 CDS CP001733.2 857280 857026 -3 - 255 hypothetical protein - none -
fig|6666666.229904.peg.898 CDS CP001733.2 857702 858151 2 + 450 ImpA - none -
fig|6666666.229904.peg.899 CDS CP001733.2 858588 858424 -3 - 165 hypothetical protein - none -
fig|6666666.229904.peg.900 CDS CP001733.2 860349 858883 -3 - 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.229904.peg.901 CDS CP001733.2 860491 861423 1 + 933 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin biosynthesis;
Biotin synthesis cluster;
Biotin synthesis cluster
fig|6666666.229904.peg.902 CDS CP001733.2 861510 861713 3 + 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229904.peg.904 CDS CP001733.2 868386 867568 -3 - 819 Peptide transport system ATP-binding protein SapF - none -
fig|6666666.229904.peg.905 CDS CP001733.2 869442 868390 -3 - 1053 Peptide transport system ATP-binding protein SapD - none -
fig|6666666.229904.peg.906 CDS CP001733.2 870337 869450 -1 - 888 Peptide transport system permease protein SapC - none -
fig|6666666.229904.peg.907 CDS CP001733.2 871292 870327 -2 - 966 Peptide transport system permease protein SapB - none -
fig|6666666.229904.peg.908 CDS CP001733.2 872923 871292 -1 - 1632 Peptide transport periplasmic protein sapA (TC 3.A.1.5.5) - none -
fig|6666666.229904.peg.909 CDS CP001733.2 873188 874603 2 + 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229904.peg.910 CDS CP001733.2 874616 875695 2 + 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229904.peg.911 CDS CP001733.2 875779 876738 1 + 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229904.peg.912 CDS CP001733.2 876869 876735 -2 - 135 hypothetical protein - none -
fig|6666666.229904.peg.913 CDS CP001733.2 877103 876954 -2 - 150 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229904.peg.914 CDS CP001733.2 877414 877118 -1 - 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229904.peg.915 CDS CP001733.2 878477 877533 -2 - 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229904.peg.916 CDS CP001733.2 880342 878492 -1 - 1851 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229904.peg.917 CDS CP001733.2 881829 880342 -3 - 1488 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229904.peg.918 CDS CP001733.2 882278 881826 -2 - 453 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229904.peg.919 CDS CP001733.2 882277 882423 1 + 147 hypothetical protein - none -
fig|6666666.229904.peg.920 CDS CP001733.2 884269 882476 -1 - 1794 Mlr4739 protein - none -
fig|6666666.229904.peg.921 CDS CP001733.2 885577 884657 -1 - 921 RfbJ protein - none -
fig|6666666.229904.peg.922 CDS CP001733.2 887093 885585 -2 - 1509 putative integral membrane protein - none -
fig|6666666.229904.peg.923 CDS CP001733.2 887697 887080 -3 - 618 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229904.peg.924 CDS CP001733.2 889240 887726 -1 - 1515 Dca - none -
fig|6666666.229904.peg.925 CDS CP001733.2 890307 889759 -3 - 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229904.peg.926 CDS CP001733.2 890378 891418 2 + 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229904.peg.927 CDS CP001733.2 891639 891896 3 + 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229904.peg.928 CDS CP001733.2 892010 893737 2 + 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229904.peg.929 CDS CP001733.2 893798 894298 2 + 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229904.peg.930 CDS CP001733.2 896463 894424 -3 - 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229904.peg.931 CDS CP001733.2 896605 896970 1 + 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229904.peg.932 CDS CP001733.2 897026 898564 2 + 1539 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229904.peg.933 CDS CP001733.2 899426 898839 -2 - 588 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229904.peg.934 CDS CP001733.2 900403 899429 -1 - 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229904.peg.935 CDS CP001733.2 900505 901071 1 + 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229904.peg.936 CDS CP001733.2 901227 902171 3 + 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229904.peg.937 CDS CP001733.2 902714 903898 2 + 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229904.peg.938 CDS CP001733.2 903913 904599 1 + 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229904.peg.939 CDS CP001733.2 904599 905849 3 + 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229904.peg.940 CDS CP001733.2 905950 907029 1 + 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229904.peg.941 CDS CP001733.2 907160 907038 -2 - 123 hypothetical protein - none -
fig|6666666.229904.peg.942 CDS CP001733.2 907175 908581 2 + 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229904.peg.943 CDS CP001733.2 908605 909687 1 + 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229904.peg.944 CDS CP001733.2 909703 911352 1 + 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229904.peg.945 CDS CP001733.2 911492 911965 2 + 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229904.peg.946 CDS CP001733.2 911972 912397 2 + 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229904.peg.947 CDS CP001733.2 912416 913399 2 + 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229904.peg.948 CDS CP001733.2 913409 913900 2 + 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229904.peg.949 CDS CP001733.2 913909 914529 1 + 621 L-lysine permease - none -
fig|6666666.229904.peg.950 CDS CP001733.2 914551 915363 1 + 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229904.peg.951 CDS CP001733.2 915391 915522 1 + 132 hypothetical protein - none -
fig|6666666.229904.peg.952 CDS CP001733.2 915723 915475 -3 - 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229904.peg.953 CDS CP001733.2 916060 915791 -1 - 270 hypothetical protein - none -
fig|6666666.229904.peg.954 CDS CP001733.2 917212 916082 -1 - 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229904.peg.955 CDS CP001733.2 920394 918124 -3 - 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229904.peg.956 CDS CP001733.2 922169 920697 -2 - 1473 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229904.peg.957 CDS CP001733.2 922307 922429 2 + 123 hypothetical protein - none -
fig|6666666.229904.peg.958 CDS CP001733.2 922440 923468 3 + 1029 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229904.peg.959 CDS CP001733.2 923520 925550 3 + 2031 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229904.peg.960 CDS CP001733.2 925534 926574 1 + 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229904.peg.961 CDS CP001733.2 926646 926533 -3 - 114 hypothetical protein - none -
fig|6666666.229904.peg.962 CDS CP001733.2 928682 926631 -2 - 2052 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229904.peg.963 CDS CP001733.2 929667 928777 -3 - 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229904.peg.964 CDS CP001733.2 931233 929689 -3 - 1545 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229904.peg.965 CDS CP001733.2 931388 931257 -2 - 132 hypothetical protein - none -
fig|6666666.229904.peg.966 CDS CP001733.2 932547 931357 -3 - 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229904.peg.967 CDS CP001733.2 933004 934122 1 + 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229904.peg.968 CDS CP001733.2 934199 935482 2 + 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229904.peg.969 CDS CP001733.2 935568 936467 3 + 900 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229904.peg.970 CDS CP001733.2 936538 936669 1 + 132 hypothetical protein - none -
fig|6666666.229904.peg.971 CDS CP001733.2 937575 936844 -3 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229904.peg.972 CDS CP001733.2 938805 937591 -3 - 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229904.peg.973 CDS CP001733.2 938934 939590 3 + 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229904.peg.974 CDS CP001733.2 941131 939689 -1 - 1443 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229904.peg.975 CDS CP001733.2 941292 941768 3 + 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229904.peg.976 CDS CP001733.2 942145 941843 -1 - 303 FIG004454: RNA binding protein - none -
fig|6666666.229904.peg.977 CDS CP001733.2 942313 942624 1 + 312 Phage-related protein - none -
fig|6666666.229904.peg.978 CDS CP001733.2 942609 942905 3 + 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229904.peg.979 CDS CP001733.2 943552 942938 -1 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229904.peg.980 CDS CP001733.2 943579 944976 1 + 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229904.peg.981 CDS CP001733.2 945760 945281 -1 - 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229904.peg.982 CDS CP001733.2 945821 946792 2 + 972 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229904.peg.983 CDS CP001733.2 946848 947171 3 + 324 capsular polysaccharide biosynthesis protein, putative - none -
fig|6666666.229904.peg.984 CDS CP001733.2 948390 948692 3 + 303 hypothetical protein - none -
fig|6666666.229904.peg.985 CDS CP001733.2 948807 949502 3 + 696 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229904.peg.986 CDS CP001733.2 949648 951234 1 + 1587 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229904.peg.987 CDS CP001733.2 951586 951329 -1 - 258 transposase A - none -
fig|6666666.229904.peg.988 CDS CP001733.2 952007 951741 -2 - 267 FIG00697940: hypothetical protein - none -
fig|6666666.229904.peg.989 CDS CP001733.2 952128 952922 3 + 795 possible DNA-binding protein - none -
fig|6666666.229904.peg.990 CDS CP001733.2 953453 953692 2 + 240 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229904.peg.991 CDS CP001733.2 953695 953955 1 + 261 ABC transporter ATP-binding protein - none -
fig|6666666.229904.peg.992 CDS CP001733.2 953958 954305 3 + 348 ABC transporter ATP-binding protein - none -
fig|6666666.229904.peg.993 CDS CP001733.2 954302 955162 2 + 861 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229904.peg.994 CDS CP001733.2 955235 955381 2 + 147 hypothetical protein - none -
fig|6666666.229904.peg.995 CDS CP001733.2 955458 956906 3 + 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229904.peg.996 CDS CP001733.2 956957 962728 2 + 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229904.peg.997 CDS CP001733.2 962859 963908 3 + 1050 Putative membrane protein YeiH - none -
fig|6666666.229904.peg.998 CDS CP001733.2 964028 966385 2 + 2358 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229904.peg.999 CDS CP001733.2 967169 966495 -2 - 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229904.peg.1000 CDS CP001733.2 967707 967246 -3 - 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229904.peg.1001 CDS CP001733.2 969534 967762 -3 - 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229904.peg.1002 CDS CP001733.2 969882 970973 3 + 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229904.peg.1003 CDS CP001733.2 971065 971814 1 + 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229904.peg.1004 CDS CP001733.2 971855 972715 2 + 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229904.peg.1005 CDS CP001733.2 972709 973404 1 + 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229904.peg.1006 CDS CP001733.2 974701 973487 -1 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229904.peg.1007 CDS CP001733.2 974815 974952 1 + 138 hypothetical protein - none -
fig|6666666.229904.peg.1008 CDS CP001733.2 974963 975190 2 + 228 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229904.peg.1009 CDS CP001733.2 975708 975445 -3 - 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229904.peg.1010 CDS CP001733.2 975835 976569 1 + 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229904.peg.1011 CDS CP001733.2 976588 977493 1 + 906 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229904.peg.1012 CDS CP001733.2 977546 977737 2 + 192 hypothetical protein - none -
fig|6666666.229904.peg.1013 CDS CP001733.2 978394 977789 -1 - 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229904.peg.1014 CDS CP001733.2 979892 978498 -2 - 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229904.peg.1015 CDS CP001733.2 980102 980551 2 + 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229904.peg.1016 CDS CP001733.2 980590 980718 1 + 129 RNA-binding domain protein - none -
fig|6666666.229904.peg.1017 CDS CP001733.2 980746 980895 1 + 150 RNA-binding domain protein - none -
fig|6666666.229904.peg.1018 CDS CP001733.2 981594 984458 3 + 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229904.peg.1019 CDS CP001733.2 984525 985418 3 + 894 hypothetical protein - none -
fig|6666666.229904.peg.1020 CDS CP001733.2 985653 985537 -3 - 117 HipA protein Persister Cells
fig|6666666.229904.peg.1021 CDS CP001733.2 985985 985647 -2 - 339 HipA protein Persister Cells
fig|6666666.229904.peg.1022 CDS CP001733.2 986316 986035 -3 - 282 HipB protein Persister Cells
fig|6666666.229904.peg.1023 CDS CP001733.2 987974 986460 -2 - 1515 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229904.peg.1024 CDS CP001733.2 988718 987987 -2 - 732 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229904.peg.1025 CDS CP001733.2 989148 988783 -3 - 366 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229904.peg.1026 CDS CP001733.2 989357 989839 2 + 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229904.peg.1027 CDS CP001733.2 991937 989958 -2 - 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229904.peg.1028 CDS CP001733.2 992798 992010 -2 - 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229904.peg.1029 CDS CP001733.2 993644 992889 -2 - 756 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229904.peg.1030 CDS CP001733.2 994543 993869 -1 - 675 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229904.peg.1031 CDS CP001733.2 994929 994504 -3 - 426 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229904.peg.1032 CDS CP001733.2 996627 995119 -3 - 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229904.peg.1033 CDS CP001733.2 997586 996684 -2 - 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229904.peg.1034 CDS CP001733.2 997866 997705 -3 - 162 hypothetical protein - none -
fig|6666666.229904.peg.1035 CDS CP001733.2 997950 998633 3 + 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229904.peg.1036 CDS CP001733.2 998646 1000367 3 + 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229904.peg.1037 CDS CP001733.2 1000400 1001047 2 + 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229904.peg.1038 CDS CP001733.2 1001064 1001756 3 + 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229904.peg.1039 CDS CP001733.2 1001935 1002630 1 + 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229904.peg.1040 CDS CP001733.2 1002637 1003140 1 + 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229904.peg.1041 CDS CP001733.2 1003140 1003793 3 + 654 Substrate-specific component NikM of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229904.peg.1042 CDS CP001733.2 1003790 1004455 2 + 666 Transmembrane component NikQ of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229904.peg.1043 CDS CP001733.2 1004452 1005075 1 + 624 ATPase component NikO of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229904.peg.1044 CDS CP001733.2 1005154 1005963 1 + 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229904.peg.1045 CDS CP001733.2 1005990 1007102 3 + 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229904.peg.1046 CDS CP001733.2 1007102 1008115 2 + 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229904.peg.1047 CDS CP001733.2 1008137 1008289 2 + 153 hypothetical protein - none -
fig|6666666.229904.peg.1048 CDS CP001733.2 1010894 1010079 -2 - 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229904.peg.1049 CDS CP001733.2 1011928 1011044 -1 - 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229904.peg.1050 CDS CP001733.2 1013170 1012103 -1 - 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229904.peg.1051 CDS CP001733.2 1014293 1013175 -2 - 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229904.peg.1052 CDS CP001733.2 1014430 1015920 1 + 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229904.peg.1053 CDS CP001733.2 1017126 1016065 -3 - 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229904.peg.1054 CDS CP001733.2 1017841 1017113 -1 - 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229904.peg.1055 CDS CP001733.2 1018683 1017919 -3 - 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229904.peg.1056 CDS CP001733.2 1018910 1019689 2 + 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229904.peg.1057 CDS CP001733.2 1019910 1021253 3 + 1344 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229904.peg.1058 CDS CP001733.2 1021916 1021320 -2 - 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229904.peg.1059 CDS CP001733.2 1022953 1021925 -1 - 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229904.peg.1060 CDS CP001733.2 1024086 1022962 -3 - 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229904.peg.1061 CDS CP001733.2 1024538 1024086 -2 - 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229904.peg.1062 CDS CP001733.2 1025716 1024655 -1 - 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229904.peg.1063 CDS CP001733.2 1026641 1025736 -2 - 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229904.peg.1064 CDS CP001733.2 1027103 1028122 2 + 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229904.peg.1065 CDS CP001733.2 1028490 1029230 3 + 741 FIG00698611: hypothetical protein - none -
fig|6666666.229904.peg.1066 CDS CP001733.2 1030321 1029386 -1 - 936 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229904.peg.1067 CDS CP001733.2 1030577 1031044 2 + 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229904.peg.1068 CDS CP001733.2 1031068 1031955 1 + 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229904.peg.1069 CDS CP001733.2 1032146 1032727 2 + 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.1070 CDS CP001733.2 1032727 1033317 1 + 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.1071 CDS CP001733.2 1033318 1035555 1 + 2238 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.1072 CDS CP001733.2 1035566 1036645 2 + 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.1073 CDS CP001733.2 1036652 1037272 2 + 621 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.1074 CDS CP001733.2 1037265 1038050 3 + 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229904.peg.1075 CDS CP001733.2 1038197 1038832 2 + 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229904.peg.1076 CDS CP001733.2 1038857 1040224 2 + 1368 sodium-dependent transporter - none -
fig|6666666.229904.peg.1077 CDS CP001733.2 1041404 1040619 -2 - 786 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229904.peg.1078 CDS CP001733.2 1042189 1041416 -1 - 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229904.peg.1079 CDS CP001733.2 1042378 1043910 1 + 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229904.peg.1080 CDS CP001733.2 1044776 1044018 -2 - 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229904.peg.1081 CDS CP001733.2 1045711 1044788 -1 - 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229904.peg.1082 CDS CP001733.2 1046684 1045719 -2 - 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229904.peg.1083 CDS CP001733.2 1047643 1046744 -1 - 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229904.peg.1084 CDS CP001733.2 1047850 1049826 1 + 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229904.peg.1085 CDS CP001733.2 1050760 1049900 -1 - 861 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229904.peg.1086 CDS CP001733.2 1051060 1050926 -1 - 135 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229904.peg.1087 CDS CP001733.2 1051185 1051601 3 + 417 Protein ygiW precursor - none -
fig|6666666.229904.peg.1088 CDS CP001733.2 1051739 1052410 2 + 672 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229904.peg.1089 CDS CP001733.2 1052397 1053773 3 + 1377 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229904.peg.1090 CDS CP001733.2 1055668 1053899 -1 - 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229904.peg.1091 CDS CP001733.2 1056146 1055901 -2 - 246 FIG00696862: hypothetical protein - none -
fig|6666666.229904.peg.1092 CDS CP001733.2 1057677 1056340 -3 - 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229904.peg.1093 CDS CP001733.2 1058599 1057772 -1 - 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229904.peg.1094 CDS CP001733.2 1058886 1058770 -3 - 117 hypothetical protein - none -
fig|6666666.229904.peg.1095 CDS CP001733.2 1058956 1060539 1 + 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229904.peg.1096 CDS CP001733.2 1060726 1061076 1 + 351 YPPCP.09C homologue - none -
fig|6666666.229904.peg.1097 CDS CP001733.2 1061073 1061372 3 + 300 Putative transcriptional regulator - none -
fig|6666666.229904.peg.1098 CDS CP001733.2 1064341 1061408 -1 - 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229904.peg.1099 CDS CP001733.2 1064763 1067069 3 + 2307 CRISPR-associated protein Cas3@1@1 CRISPRs
fig|6666666.229904.peg.1100 CDS CP001733.2 1067575 1068081 1 + 507 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229904.peg.1101 CDS CP001733.2 1068071 1069825 2 + 1755 Overcoming lysogenization defect protein - none -
fig|6666666.229904.peg.1102 CDS CP001733.2 1069948 1070892 1 + 945 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229904.peg.1103 CDS CP001733.2 1070896 1071189 1 + 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229904.peg.1104 CDS CP001733.2 1071814 1072194 1 + 381 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229904.peg.1105 CDS CP001733.2 1072216 1073220 1 + 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229904.peg.1106 CDS CP001733.2 1073286 1074857 3 + 1572 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229904.peg.1107 CDS CP001733.2 1074841 1075488 1 + 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229904.peg.1108 CDS CP001733.2 1075533 1076537 3 + 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229904.peg.1109 CDS CP001733.2 1078017 1076635 -3 - 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229904.peg.1110 CDS CP001733.2 1078080 1078250 3 + 171 hypothetical protein - none -
fig|6666666.229904.peg.1111 CDS CP001733.2 1078618 1078208 -1 - 411 probable membrane protein YPO3565 - none -
fig|6666666.229904.peg.1112 CDS CP001733.2 1080552 1078789 -3 - 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229904.peg.1113 CDS CP001733.2 1081848 1080643 -3 - 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229904.peg.1114 CDS CP001733.2 1082024 1082362 2 + 339 FIG00904093: hypothetical protein - none -
fig|6666666.229904.peg.1115 CDS CP001733.2 1082551 1084044 1 + 1494 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229904.peg.1116 CDS CP001733.2 1084800 1084102 -3 - 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229904.peg.1117 CDS CP001733.2 1084821 1085522 3 + 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229904.peg.1118 CDS CP001733.2 1085707 1087011 1 + 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229904.peg.1119 CDS CP001733.2 1087073 1088296 2 + 1224 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229904.peg.1120 CDS CP001733.2 1089677 1089033 -2 - 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229904.peg.1121 CDS CP001733.2 1091099 1089810 -2 - 1290 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229904.peg.1122 CDS CP001733.2 1091447 1091106 -2 - 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229904.peg.1123 CDS CP001733.2 1092469 1091453 -1 - 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229904.peg.1124 CDS CP001733.2 1092663 1093049 3 + 387 Integral membrane protein - none -
fig|6666666.229904.peg.1125 CDS CP001733.2 1093174 1094115 1 + 942 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229904.peg.1126 CDS CP001733.2 1094069 1094194 2 + 126 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229904.peg.1127 CDS CP001733.2 1095556 1094222 -1 - 1335 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229904.peg.1128 CDS CP001733.2 1096457 1095600 -2 - 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229904.peg.1129 CDS CP001733.2 1097473 1096520 -1 - 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229904.peg.1130 CDS CP001733.2 1099255 1100205 1 + 951 hypothetical protein - none -
fig|6666666.229904.peg.1131 CDS CP001733.2 1100642 1100776 2 + 135 hypothetical protein - none -
fig|6666666.229904.peg.1132 CDS CP001733.2 1101735 1101511 -3 - 225 hypothetical protein - none -
fig|6666666.229904.peg.1133 CDS CP001733.2 1102156 1101800 -1 - 357 ORF_ID:slr6051 hypothetical protein - none -
fig|6666666.229904.peg.1134 CDS CP001733.2 1102240 1102599 1 + 360 phage-related protein - none -
fig|6666666.229904.peg.1135 CDS CP001733.2 1103044 1102625 -1 - 420 hypothetical protein - none -
fig|6666666.229904.peg.1136 CDS CP001733.2 1103278 1103096 -1 - 183 hypothetical protein - none -
fig|6666666.229904.peg.1137 CDS CP001733.2 1103531 1104682 2 + 1152 Family of unknown function (DUF450) family - none -
fig|6666666.229904.peg.1138 CDS CP001733.2 1104654 1104782 3 + 129 hypothetical protein - none -
fig|6666666.229904.peg.1139 CDS CP001733.2 1104993 1106231 3 + 1239 Phage tail fibers Phage tail fiber proteins
fig|6666666.229904.peg.1140 CDS CP001733.2 1106231 1106842 2 + 612 Phage tail fibers Phage tail fiber proteins
fig|6666666.229904.peg.1141 CDS CP001733.2 1107597 1106839 -3 - 759 Integrase - none -
fig|6666666.229904.peg.1142 CDS CP001733.2 1109337 1107778 -3 - 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229904.peg.1143 CDS CP001733.2 1109635 1109369 -1 - 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229904.peg.1144 CDS CP001733.2 1109919 1109647 -3 - 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229904.peg.1145 CDS CP001733.2 1110144 1109959 -3 - 186 hypothetical protein - none -
fig|6666666.229904.peg.1146 CDS CP001733.2 1111526 1110174 -2 - 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229904.peg.1147 CDS CP001733.2 1111965 1112420 3 + 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229904.peg.1148 CDS CP001733.2 1112444 1113940 2 + 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229904.peg.1149 CDS CP001733.2 1113956 1116445 2 + 2490 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229904.peg.1150 CDS CP001733.2 1116977 1117363 2 + 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229904.peg.1151 CDS CP001733.2 1117363 1118280 1 + 918 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229904.peg.1152 CDS CP001733.2 1118474 1118322 -2 - 153 hypothetical protein - none -
fig|6666666.229904.peg.1153 CDS CP001733.2 1120494 1119307 -3 - 1188 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229904.peg.1154 CDS CP001733.2 1121467 1120742 -1 - 726 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229904.peg.1155 CDS CP001733.2 1121762 1123297 2 + 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229904.peg.1156 CDS CP001733.2 1123308 1124732 3 + 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229904.peg.1157 CDS CP001733.2 1124913 1125155 3 + 243 DNA-damage-inducible protein d - none -
fig|6666666.229904.peg.1158 CDS CP001733.2 1125287 1125126 -2 - 162 hypothetical protein - none -
fig|6666666.229904.peg.1159 CDS CP001733.2 1125756 1126604 3 + 849 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229904.peg.1160 CDS CP001733.2 1127116 1128225 1 + 1110 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229904.peg.1161 CDS CP001733.2 1128463 1129533 1 + 1071 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229904.peg.1162 CDS CP001733.2 1129530 1130399 3 + 870 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229904.peg.1163 CDS CP001733.2 1130396 1131244 2 + 849 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229904.peg.1164 CDS CP001733.2 1131264 1132355 3 + 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229904.peg.1165 CDS CP001733.2 1134569 1132740 -2 - 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229904.peg.1166 CDS CP001733.2 1135481 1134708 -2 - 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) - none -
fig|6666666.229904.peg.1167 CDS CP001733.2 1135662 1135483 -3 - 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.229904.peg.1168 CDS CP001733.2 1136658 1135684 -3 - 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) - none -
fig|6666666.229904.peg.1169 CDS CP001733.2 1138425 1136677 -3 - 1749 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229904.peg.1170 CDS CP001733.2 1140706 1138472 -1 - 2235 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.229904.peg.1171 CDS CP001733.2 1141199 1141636 2 + 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229904.peg.1172 CDS CP001733.2 1141920 1143698 3 + 1779 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229904.peg.1173 CDS CP001733.2 1144131 1143769 -3 - 363 hypothetical protein - none -
fig|6666666.229904.peg.1174 CDS CP001733.2 1146613 1144478 -1 - 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229904.peg.1175 CDS CP001733.2 1147885 1146683 -1 - 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229904.peg.1176 CDS CP001733.2 1148153 1148596 2 + 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229904.peg.1177 CDS CP001733.2 1148775 1149317 3 + 543 Colicin V production protein - none -
fig|6666666.229904.peg.1178 CDS CP001733.2 1149439 1149314 -1 - 126 hypothetical protein - none -
fig|6666666.229904.peg.1179 CDS CP001733.2 1151536 1149461 -1 - 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229904.peg.1180 CDS CP001733.2 1154029 1151639 -1 - 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229904.peg.1181 CDS CP001733.2 1154198 1156912 2 + 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229904.peg.1182 CDS CP001733.2 1157925 1157065 -3 - 861 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229904.peg.1183 CDS CP001733.2 1158319 1160976 1 + 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229904.peg.1184 CDS CP001733.2 1161005 1162675 2 + 1671 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229904.peg.1185 CDS CP001733.2 1162712 1164193 2 + 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229904.peg.1186 CDS CP001733.2 1164398 1164279 -2 - 120 hypothetical protein - none -
fig|6666666.229904.peg.1187 CDS CP001733.2 1165177 1164623 -1 - 555 FIG002003: Protein YdjA - none -
fig|6666666.229904.peg.1188 CDS CP001733.2 1165301 1167181 2 + 1881 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229904.peg.1189 CDS CP001733.2 1167222 1168346 3 + 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229904.peg.1190 CDS CP001733.2 1168420 1169043 1 + 624 Hypothetical YciO protein, TsaC/YrdC paralog YrdC-YciO-Sua5 protein family
fig|6666666.229904.peg.1191 CDS CP001733.2 1169098 1170084 1 + 987 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229904.peg.1192 CDS CP001733.2 1170096 1171067 3 + 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229904.peg.1193 CDS CP001733.2 1171152 1171979 3 + 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229904.peg.1194 CDS CP001733.2 1172414 1172094 -2 - 321 putative cytoplasmic protein - none -
fig|6666666.229904.peg.1195 CDS CP001733.2 1172582 1172448 -2 - 135 hypothetical protein - none -
fig|6666666.229904.peg.1196 CDS CP001733.2 1173883 1172885 -1 - 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229904.peg.1197 CDS CP001733.2 1175292 1174189 -3 - 1104 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229904.peg.1198 CDS CP001733.2 1175485 1176198 1 + 714 SanA protein - none -
fig|6666666.229904.peg.1199 CDS CP001733.2 1177168 1176182 -1 - 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229904.peg.1200 CDS CP001733.2 1178003 1178260 2 + 258 FIG00699498: hypothetical protein - none -
fig|6666666.229904.peg.1201 CDS CP001733.2 1178415 1178296 -3 - 120 FIG00697497: hypothetical protein - none -
fig|6666666.229904.peg.1202 CDS CP001733.2 1179914 1179432 -2 - 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229904.peg.1203 CDS CP001733.2 1180570 1179929 -1 - 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229904.peg.1204 CDS CP001733.2 1181644 1180574 -1 - 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229904.peg.1205 CDS CP001733.2 1181860 1182552 1 + 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229904.peg.1206 CDS CP001733.2 1183245 1182658 -3 - 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229904.peg.1207 CDS CP001733.2 1183894 1183310 -1 - 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229904.peg.1208 CDS CP001733.2 1184275 1183907 -1 - 369 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229904.peg.1209 CDS CP001733.2 1186000 1184276 -1 - 1725 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229904.peg.1210 CDS CP001733.2 1186077 1186925 3 + 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229904.peg.1211 CDS CP001733.2 1187195 1188784 2 + 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229904.peg.1212 CDS CP001733.2 1188961 1190298 1 + 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229904.peg.1213 CDS CP001733.2 1190991 1190401 -3 - 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229904.peg.1214 CDS CP001733.2 1191184 1192242 1 + 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229904.peg.1215 CDS CP001733.2 1192432 1193256 1 + 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229904.peg.1216 CDS CP001733.2 1194190 1193315 -1 - 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229904.peg.1217 CDS CP001733.2 1194431 1196362 2 + 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229904.peg.1218 CDS CP001733.2 1196613 1197059 3 + 447 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229904.peg.1219 CDS CP001733.2 1197104 1197832 2 + 729 Type III restriction-modification system restriction subunit (EC 3.1.21.5) - none -
fig|6666666.229904.peg.1220 CDS CP001733.2 1197835 1198134 1 + 300 Type III restriction-modification system restriction subunit (EC 3.1.21.5) - none -
fig|6666666.229904.peg.1221 CDS CP001733.2 1198136 1198273 2 + 138 hypothetical protein - none -
fig|6666666.229904.peg.1222 CDS CP001733.2 1199030 1198251 -2 - 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229904.peg.1223 CDS CP001733.2 1199405 1199884 2 + 480 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.229904.peg.1224 CDS CP001733.2 1200028 1199885 -1 - 144 hypothetical protein - none -
fig|6666666.229904.peg.1225 CDS CP001733.2 1200108 1200305 3 + 198 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.229904.peg.1226 CDS CP001733.2 1200359 1200712 2 + 354 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.229904.peg.1227 CDS CP001733.2 1200874 1200761 -1 - 114 hypothetical protein - none -
fig|6666666.229904.peg.1228 CDS CP001733.2 1202161 1202042 -1 - 120 hypothetical protein - none -
fig|6666666.229904.peg.1229 CDS CP001733.2 1202252 1202782 2 + 531 Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) Lactose and Galactose Uptake and Utilization
fig|6666666.229904.peg.1230 CDS CP001733.2 1202772 1203203 3 + 432 Tagatose 1,6-bisphosphate aldolase (EC 4.1.2.40) - none -
fig|6666666.229904.peg.1231 CDS CP001733.2 1203221 1203670 2 + 450 Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144) - none -
fig|6666666.229904.peg.1232 CDS CP001733.2 1203831 1204589 3 + 759 Galactitol utilization operon repressor - none -
fig|6666666.229904.peg.1233 CDS CP001733.2 1206559 1204709 -1 - 1851 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229904.peg.1234 CDS CP001733.2 1207534 1206644 -1 - 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229904.peg.1235 CDS CP001733.2 1207790 1207545 -2 - 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229904.peg.1236 CDS CP001733.2 1208015 1208911 2 + 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229904.peg.1237 CDS CP001733.2 1208934 1210280 3 + 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229904.peg.1238 CDS CP001733.2 1210978 1210337 -1 - 642 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229904.peg.1239 CDS CP001733.2 1212497 1211040 -2 - 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.1240 CDS CP001733.2 1213419 1212511 -3 - 909 Putative surface protein - none -
fig|6666666.229904.peg.1241 CDS CP001733.2 1213550 1213753 2 + 204 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229904.peg.1242 CDS CP001733.2 1213761 1214228 3 + 468 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229904.peg.1243 CDS CP001733.2 1214273 1215136 2 + 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229904.peg.1244 CDS CP001733.2 1215219 1215542 3 + 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229904.peg.1245 CDS CP001733.2 1217288 1216350 -2 - 939 hypothetical protein - none -
fig|6666666.229904.peg.1246 CDS CP001733.2 1217855 1218124 2 + 270 hypothetical protein - none -
fig|6666666.229904.peg.1247 CDS CP001733.2 1218751 1220292 1 + 1542 Esterase/lipase - none -
fig|6666666.229904.peg.1248 CDS CP001733.2 1221938 1220565 -2 - 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229904.peg.1249 CDS CP001733.2 1223949 1222015 -3 - 1935 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) Multidrug Resistance Efflux Pumps
fig|6666666.229904.peg.1250 CDS CP001733.2 1225153 1223969 -1 - 1185 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229904.peg.1251 CDS CP001733.2 1225354 1227045 1 + 1692 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229904.peg.1252 CDS CP001733.2 1227117 1227551 3 + 435 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229904.peg.1253 CDS CP001733.2 1227651 1228211 3 + 561 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229904.peg.1254 CDS CP001733.2 1228208 1230403 2 + 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229904.peg.1255 CDS CP001733.2 1230400 1232409 1 + 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229904.peg.1256 CDS CP001733.2 1232436 1233746 3 + 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229904.peg.1257 CDS CP001733.2 1233727 1233864 1 + 138 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229904.peg.1258 CDS CP001733.2 1233948 1235387 3 + 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229904.peg.1259 CDS CP001733.2 1235511 1237976 3 + 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229904.peg.1260 CDS CP001733.2 1238141 1238001 -2 - 141 hypothetical protein - none -
fig|6666666.229904.peg.1261 CDS CP001733.2 1238700 1238095 -3 - 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229904.peg.1262 CDS CP001733.2 1238914 1239201 1 + 288 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.229904.peg.1263 CDS CP001733.2 1239350 1239952 2 + 603 lipoprotein HlpB - none -
fig|6666666.229904.peg.1264 CDS CP001733.2 1240127 1241005 2 + 879 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229904.peg.1265 CDS CP001733.2 1241185 1242513 1 + 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229904.peg.1266 CDS CP001733.2 1242685 1242569 -1 - 117 hypothetical protein - none -
fig|6666666.229904.peg.1267 CDS CP001733.2 1242684 1245962 3 + 3279 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229904.peg.1268 CDS CP001733.2 1245953 1246141 2 + 189 hypothetical protein - none -
fig|6666666.229904.peg.1269 CDS CP001733.2 1246162 1246902 1 + 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229904.peg.1270 CDS CP001733.2 1246902 1251392 3 + 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229904.peg.1271 CDS CP001733.2 1251468 1252340 3 + 873 Integral membrane protein - none -
fig|6666666.229904.peg.1272 CDS CP001733.2 1252352 1253779 2 + 1428 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229904.peg.1273 CDS CP001733.2 1254027 1254200 3 + 174 hypothetical protein - none -
fig|6666666.229904.peg.1274 CDS CP001733.2 1254242 1254412 2 + 171 Mobile element protein - none -
fig|6666666.229904.peg.1275 CDS CP001733.2 1254741 1254980 3 + 240 Mobile element protein - none -
fig|6666666.229904.peg.1276 CDS CP001733.2 1255278 1255889 3 + 612 hypothetical protein - none -
fig|6666666.229904.peg.1277 CDS CP001733.2 1257128 1257613 2 + 486 Ferritin-like protein 2 - none -
fig|6666666.229904.peg.1278 CDS CP001733.2 1257629 1258126 2 + 498 Ferritin-like protein 2 - none -
fig|6666666.229904.peg.1279 CDS CP001733.2 1258358 1258188 -2 - 171 hypothetical protein - none -
fig|6666666.229904.peg.1280 CDS CP001733.2 1258466 1259239 2 + 774 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229904.peg.1281 CDS CP001733.2 1259358 1260290 3 + 933 Universal stress protein E Universal stress protein family
fig|6666666.229904.peg.1282 CDS CP001733.2 1260417 1261253 3 + 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229904.peg.1283 CDS CP001733.2 1263944 1261338 -2 - 2607 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229904.peg.1284 CDS CP001733.2 1264598 1264182 -2 - 417 COG0613, Predicted metal-dependent phosphoesterases (PHP family) YrdC-YciO-Sua5 protein family;
tRNA modification Bacteria
fig|6666666.229904.peg.1285 CDS CP001733.2 1265717 1264698 -2 - 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229904.peg.1286 CDS CP001733.2 1268399 1265790 -2 - 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229904.peg.1287 CDS CP001733.2 1268821 1270011 1 + 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229904.peg.1288 CDS CP001733.2 1270448 1270062 -2 - 387 Transcriptional regulator, TetR family - none -
fig|6666666.229904.peg.1289 CDS CP001733.2 1270502 1270678 2 + 177 hypothetical protein - none -
fig|6666666.229904.peg.1290 CDS CP001733.2 1270799 1271758 2 + 960 HlyD family secretion protein - none -
fig|6666666.229904.peg.1291 CDS CP001733.2 1271761 1272990 1 + 1230 ABC-type multidrug transport system, permease component - none -
fig|6666666.229904.peg.1292 CDS CP001733.2 1272994 1274505 1 + 1512 ABC-type multidrug transport system, permease component - none -
fig|6666666.229904.peg.1293 CDS CP001733.2 1274507 1275634 2 + 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229904.peg.1294 CDS CP001733.2 1275654 1276514 3 + 861 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229904.peg.1295 CDS CP001733.2 1276533 1277552 3 + 1020 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229904.peg.1296 CDS CP001733.2 1277552 1278346 2 + 795 Glutathione synthetase (EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229904.peg.1297 CDS CP001733.2 1278359 1279393 2 + 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229904.peg.1298 CDS CP001733.2 1279475 1279684 2 + 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229904.peg.1299 CDS CP001733.2 1280237 1279803 -2 - 435 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229904.peg.1300 CDS CP001733.2 1281030 1280314 -3 - 717 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229904.peg.1301 CDS CP001733.2 1281918 1281058 -3 - 861 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229904.peg.1302 CDS CP001733.2 1282762 1282013 -1 - 750 ABC transporter ATP-binding protein - none -
fig|6666666.229904.peg.1303 CDS CP001733.2 1283772 1282759 -3 - 1014 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229904.peg.1304 CDS CP001733.2 1284773 1283772 -2 - 1002 ABC transporter, solute-binding protein - none -
fig|6666666.229904.peg.1305 CDS CP001733.2 1284862 1285035 1 + 174 FIG00697418: hypothetical protein - none -
fig|6666666.229904.peg.1306 CDS CP001733.2 1285037 1287049 2 + 2013 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229904.peg.1307 CDS CP001733.2 1287555 1287139 -3 - 417 putative membrane protein - none -
fig|6666666.229904.peg.1308 CDS CP001733.2 1287696 1288538 3 + 843 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Bacteria
fig|6666666.229904.peg.1309 CDS CP001733.2 1288535 1288660 2 + 126 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Bacteria
fig|6666666.229904.peg.1310 CDS CP001733.2 1289123 1288755 -2 - 369 Probable lipoprotein nlpC precursor - none -
fig|6666666.229904.peg.1311 CDS CP001733.2 1289591 1289295 -2 - 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229904.peg.1312 CDS CP001733.2 1291985 1289595 -2 - 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229904.peg.1313 CDS CP001733.2 1292994 1292005 -3 - 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229904.peg.1314 CDS CP001733.2 1294131 1293256 -3 - 876 Probable protease htpX homolog - none -
fig|6666666.229904.peg.1315 CDS CP001733.2 1294814 1295749 2 + 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) - none -
fig|6666666.229904.peg.1316 CDS CP001733.2 1295749 1296303 1 + 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) - none -
fig|6666666.229904.peg.1317 CDS CP001733.2 1296471 1298018 3 + 1548 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229904.peg.1318 CDS CP001733.2 1298029 1298553 1 + 525 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229904.peg.1319 CDS CP001733.2 1298692 1299084 1 + 393 putative - none -
fig|6666666.229904.peg.1320 CDS CP001733.2 1299096 1300097 3 + 1002 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229904.peg.1321 CDS CP001733.2 1300106 1301536 2 + 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229904.peg.1322 CDS CP001733.2 1301675 1301839 2 + 165 hypothetical protein - none -
fig|6666666.229904.peg.1323 CDS CP001733.2 1301988 1302263 3 + 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229904.peg.1324 CDS CP001733.2 1303086 1303244 3 + 159 hypothetical protein - none -
fig|6666666.229904.peg.1325 CDS CP001733.2 1303278 1303544 3 + 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229904.peg.1326 CDS CP001733.2 1303560 1305356 3 + 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229904.peg.1327 CDS CP001733.2 1305367 1306671 1 + 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229904.peg.1328 CDS CP001733.2 1309640 1308876 -2 - 765 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229904.peg.1329 CDS CP001733.2 1310013 1309882 -3 - 132 hypothetical protein - none -
fig|6666666.229904.peg.1330 CDS CP001733.2 1310046 1310813 3 + 768 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229904.peg.1331 CDS CP001733.2 1310823 1312016 3 + 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229904.peg.1332 CDS CP001733.2 1312019 1312825 2 + 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229904.peg.1333 CDS CP001733.2 1313101 1314786 1 + 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229904.peg.1334 CDS CP001733.2 1314776 1315906 2 + 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229904.peg.1335 CDS CP001733.2 1316192 1317598 2 + 1407 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229904.peg.1336 CDS CP001733.2 1318004 1317702 -2 - 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229904.peg.1337 CDS CP001733.2 1318915 1318037 -1 - 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229904.peg.1338 CDS CP001733.2 1320036 1318939 -3 - 1098 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229904.peg.1339 CDS CP001733.2 1321065 1320061 -3 - 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229904.peg.1340 CDS CP001733.2 1322110 1321079 -1 - 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229904.peg.1341 CDS CP001733.2 1323636 1322119 -3 - 1518 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229904.peg.1342 CDS CP001733.2 1323880 1324845 1 + 966 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229904.peg.1343 CDS CP001733.2 1324894 1326468 1 + 1575 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229904.peg.1344 CDS CP001733.2 1327284 1326556 -3 - 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229904.peg.1345 CDS CP001733.2 1328590 1327361 -1 - 1230 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229904.peg.1346 CDS CP001733.2 1328786 1330189 2 + 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.229904.peg.1347 CDS CP001733.2 1330813 1330352 -1 - 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229904.peg.1348 CDS CP001733.2 1331466 1330825 -3 - 642 Stringent starvation protein A Carbon Starvation
fig|6666666.229904.peg.1349 CDS CP001733.2 1332121 1331666 -1 - 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229904.peg.1350 CDS CP001733.2 1332370 1332122 -1 - 249 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229904.peg.1351 CDS CP001733.2 1332891 1332370 -3 - 522 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229904.peg.1352 CDS CP001733.2 1333917 1332904 -3 - 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229904.peg.1353 CDS CP001733.2 1334275 1335243 1 + 969 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229904.peg.1354 CDS CP001733.2 1336204 1335308 -1 - 897 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229904.peg.1355 CDS CP001733.2 1336483 1337187 1 + 705 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229904.peg.1356 CDS CP001733.2 1338728 1337271 -2 - 1458 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis;
tRNA modification Bacteria;
tRNA modification Bacteria
fig|6666666.229904.peg.1357 CDS CP001733.2 1339034 1340134 2 + 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229904.peg.1358 CDS CP001733.2 1340195 1342675 2 + 2481 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229904.peg.1359 CDS CP001733.2 1343512 1342733 -1 - 780 Protein of unknown function DUF419 - none -
fig|6666666.229904.peg.1360 CDS CP001733.2 1343742 1345199 3 + 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229904.peg.1361 CDS CP001733.2 1345416 1345670 3 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229904.peg.1362 CDS CP001733.2 1345667 1345951 2 + 285 StbE replicon stabilization toxin - none -
fig|6666666.229904.peg.1363 CDS CP001733.2 1346749 1345964 -1 - 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229904.peg.1364 CDS CP001733.2 1346748 1346867 3 + 120 hypothetical protein - none -
fig|6666666.229904.peg.1365 CDS CP001733.2 1347304 1346912 -1 - 393 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.229904.peg.1366 CDS CP001733.2 1347749 1347321 -2 - 429 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.229904.peg.1367 CDS CP001733.2 1348589 1347993 -2 - 597 hypothetical protein - none -
fig|6666666.229904.peg.1368 CDS CP001733.2 1350581 1348602 -2 - 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229904.peg.1369 CDS CP001733.2 1354246 1350581 -1 - 3666 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229904.peg.1370 CDS CP001733.2 1354673 1354317 -2 - 357 DsrE-related protein - none -
fig|6666666.229904.peg.1371 CDS CP001733.2 1355628 1355098 -3 - 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229904.peg.1372 CDS CP001733.2 1357555 1355771 -1 - 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229904.peg.1373 CDS CP001733.2 1357702 1358148 1 + 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229904.peg.1374 CDS CP001733.2 1358423 1358214 -2 - 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229904.peg.1375 CDS CP001733.2 1358778 1358614 -3 - 165 hypothetical protein - none -
fig|6666666.229904.peg.1376 CDS CP001733.2 1359545 1358832 -2 - 714 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229904.peg.1377 CDS CP001733.2 1359856 1359542 -1 - 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229904.peg.1378 CDS CP001733.2 1359951 1360745 3 + 795 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229904.peg.1379 CDS CP001733.2 1360754 1361593 2 + 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229904.peg.1380 CDS CP001733.2 1362891 1361641 -3 - 1251 Phosphoglycerate transport system transcriptional regulatory protein PgtA Phosphoglycerate transport system
fig|6666666.229904.peg.1381 CDS CP001733.2 1364866 1362884 -1 - 1983 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229904.peg.1382 CDS CP001733.2 1365849 1364863 -3 - 987 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229904.peg.1383 CDS CP001733.2 1366487 1367485 2 + 999 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229904.peg.1384 CDS CP001733.2 1367507 1368304 2 + 798 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229904.peg.1385 CDS CP001733.2 1368310 1369479 1 + 1170 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229904.peg.1386 CDS CP001733.2 1369501 1370238 1 + 738 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229904.peg.1387 CDS CP001733.2 1372409 1370580 -2 - 1830 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229904.peg.1388 CDS CP001733.2 1373154 1372525 -3 - 630 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229904.peg.1389 CDS CP001733.2 1374158 1373289 -2 - 870 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229904.peg.1390 CDS CP001733.2 1374608 1374210 -2 - 399 DNA-binding protein H-NS - none -
fig|6666666.229904.peg.1391 CDS CP001733.2 1375049 1376581 2 + 1533 Na+/H+ antiporter - none -
fig|6666666.229904.peg.1392 CDS CP001733.2 1377004 1376807 -1 - 198 Mobile element protein - none -
fig|6666666.229904.peg.1394 CDS CP001733.2 1384013 1383186 -2 - 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229904.peg.1395 CDS CP001733.2 1384541 1384044 -2 - 498 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229904.peg.1396 CDS CP001733.2 1386615 1384534 -3 - 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229904.peg.1397 CDS CP001733.2 1388739 1386616 -3 - 2124 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229904.peg.1398 CDS CP001733.2 1389051 1388785 -3 - 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229904.peg.1399 CDS CP001733.2 1389747 1389109 -3 - 639 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229904.peg.1400 CDS CP001733.2 1389760 1389909 1 + 150 hypothetical protein - none -
fig|6666666.229904.peg.1401 CDS CP001733.2 1389989 1390993 2 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229904.peg.1402 CDS CP001733.2 1391503 1391087 -1 - 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229904.peg.1403 CDS CP001733.2 1391624 1392004 2 + 381 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229904.peg.1404 CDS CP001733.2 1391997 1392290 3 + 294 UPF0125 protein yfjF - none -
fig|6666666.229904.peg.1405 CDS CP001733.2 1392323 1393516 2 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229904.peg.1406 CDS CP001733.2 1393523 1394857 2 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229904.peg.1407 CDS CP001733.2 1395717 1394863 -3 - 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229904.peg.1408 CDS CP001733.2 1396266 1395745 -3 - 522 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229904.peg.1409 CDS CP001733.2 1396995 1396270 -3 - 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB Lipopolysaccharide assembly
fig|6666666.229904.peg.1410 CDS CP001733.2 1397519 1397001 -2 - 519 LptA, protein essential for LPS transport across the periplasm Lipopolysaccharide assembly
fig|6666666.229904.peg.1411 CDS CP001733.2 1398075 1397500 -3 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229904.peg.1412 CDS CP001733.2 1398359 1399156 2 + 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229904.peg.1413 CDS CP001733.2 1399150 1399935 1 + 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229904.peg.1414 CDS CP001733.2 1399958 1400467 2 + 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229904.peg.1415 CDS CP001733.2 1400496 1401137 3 + 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229904.peg.1416 CDS CP001733.2 1401141 1401476 3 + 336 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229904.peg.1417 CDS CP001733.2 1401476 1401733 2 + 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229904.peg.1418 CDS CP001733.2 1401750 1403027 3 + 1278 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229904.peg.1419 CDS CP001733.2 1403379 1403089 -3 - 291 FIG00696346: hypothetical protein - none -
fig|6666666.229904.peg.1420 CDS CP001733.2 1403582 1405012 2 + 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229904.peg.1421 CDS CP001733.2 1405089 1405628 3 + 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229904.peg.1422 CDS CP001733.2 1405625 1406293 2 + 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229904.peg.1423 CDS CP001733.2 1406358 1407083 3 + 726 Integral membrane protein TerC - none -
fig|6666666.229904.peg.1424 CDS CP001733.2 1408601 1407192 -2 - 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229904.peg.1425 CDS CP001733.2 1408988 1410841 2 + 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229904.peg.1426 CDS CP001733.2 1410951 1410838 -3 - 114 hypothetical protein - none -
fig|6666666.229904.peg.1427 CDS CP001733.2 1411067 1413577 2 + 2511 TolA protein Ton and Tol transport systems
fig|6666666.229904.peg.1428 CDS CP001733.2 1414105 1413641 -1 - 465 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229904.peg.1429 CDS CP001733.2 1414263 1415156 3 + 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229904.peg.1430 CDS CP001733.2 1415269 1416273 1 + 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229904.peg.1431 CDS CP001733.2 1416408 1417919 3 + 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229904.peg.1432 CDS CP001733.2 1418234 1419070 2 + 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229904.peg.1433 CDS CP001733.2 1419818 1419123 -2 - 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229904.peg.1434 CDS CP001733.2 1421199 1419811 -3 - 1389 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229904.peg.1435 CDS CP001733.2 1421338 1421469 1 + 132 hypothetical protein - none -
fig|6666666.229904.peg.1436 CDS CP001733.2 1421558 1424005 2 + 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229904.peg.1437 CDS CP001733.2 1424018 1424962 2 + 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229904.peg.1438 CDS CP001733.2 1424990 1425430 2 + 441 hypothetical protein - none -
fig|6666666.229904.peg.1439 CDS CP001733.2 1425486 1426760 3 + 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229904.peg.1440 CDS CP001733.2 1426819 1427538 1 + 720 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229904.peg.1441 CDS CP001733.2 1427634 1428887 3 + 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229904.peg.1442 CDS CP001733.2 1428887 1429774 2 + 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229904.peg.1443 CDS CP001733.2 1430062 1429907 -1 - 156 hypothetical protein - none -
fig|6666666.229904.peg.1444 CDS CP001733.2 1430064 1430393 3 + 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229904.peg.1445 CDS CP001733.2 1430419 1431099 1 + 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229904.peg.1446 CDS CP001733.2 1431138 1431461 3 + 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229904.peg.1447 CDS CP001733.2 1431461 1432630 2 + 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229904.peg.1448 CDS CP001733.2 1432729 1433385 1 + 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229904.peg.1449 CDS CP001733.2 1433405 1434637 2 + 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229904.peg.1450 CDS CP001733.2 1434646 1434765 1 + 120 hypothetical protein - none -
fig|6666666.229904.peg.1451 CDS CP001733.2 1434947 1435993 2 + 1047 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229904.peg.1452 CDS CP001733.2 1436183 1437166 2 + 984 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229904.peg.1453 CDS CP001733.2 1437190 1439565 1 + 2376 Alpha-glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization
fig|6666666.229904.peg.1454 CDS CP001733.2 1439580 1440335 3 + 756 Hexuronate utilization operon transcriptional repressor ExuR - none -
fig|6666666.229904.peg.1455 CDS CP001733.2 1440355 1441539 1 + 1185 Mannonate dehydratase (EC 4.2.1.8) - none -
fig|6666666.229904.peg.1456 CDS CP001733.2 1441577 1442134 2 + 558 hypothetical protein - none -
fig|6666666.229904.peg.1457 CDS CP001733.2 1442184 1442507 3 + 324 hypothetical protein - none -
fig|6666666.229904.peg.1458 CDS CP001733.2 1442564 1443454 2 + 891 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229904.peg.1459 CDS CP001733.2 1445234 1443480 -2 - 1755 Putative sulfate permease - none -
fig|6666666.229904.peg.1460 CDS CP001733.2 1445614 1445492 -1 - 123 hypothetical protein - none -
fig|6666666.229904.peg.1461 CDS CP001733.2 1445665 1448082 1 + 2418 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229904.peg.1462 CDS CP001733.2 1449994 1448144 -1 - 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229904.peg.1463 CDS CP001733.2 1451827 1450070 -1 - 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229904.peg.1464 CDS CP001733.2 1452164 1451949 -2 - 216 SSU ribosomal protein S21p Macromolecular synthesis operon
fig|6666666.229904.peg.1465 CDS CP001733.2 1452199 1452366 1 + 168 hypothetical protein - none -
fig|6666666.229904.peg.1466 CDS CP001733.2 1452389 1453417 2 + 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ;
YrdC-YciO-Sua5 protein family
fig|6666666.229904.peg.1467 CDS CP001733.2 1453482 1453715 3 + 234 unknown - none -
fig|6666666.229904.peg.1468 CDS CP001733.2 1453718 1454296 2 + 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229904.peg.1469 CDS CP001733.2 1456376 1454364 -2 - 2013 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229904.peg.1470 CDS CP001733.2 1457515 1456478 -1 - 1038 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229904.peg.1471 CDS CP001733.2 1457655 1458479 3 + 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229904.peg.1472 CDS CP001733.2 1458580 1459527 1 + 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229904.peg.1473 CDS CP001733.2 1459605 1459492 -3 - 114 hypothetical protein - none -
fig|6666666.229904.peg.1474 CDS CP001733.2 1459893 1459747 -3 - 147 hypothetical protein - none -
fig|6666666.229904.peg.1475 CDS CP001733.2 1460550 1459969 -3 - 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229904.peg.1476 CDS CP001733.2 1461950 1460859 -2 - 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229904.peg.1477 CDS CP001733.2 1462822 1462139 -1 - 684 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229904.peg.1479 CDS CP001733.2 1470664 1469591 -1 - 1074 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.229904.peg.1480 CDS CP001733.2 1470793 1472076 1 + 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229904.peg.1481 CDS CP001733.2 1474743 1472152 -3 - 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229904.peg.1482 CDS CP001733.2 1475609 1474809 -2 - 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229904.peg.1483 CDS CP001733.2 1475743 1476084 1 + 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229904.peg.1484 CDS CP001733.2 1476086 1476298 2 + 213 hypothetical protein - none -
fig|6666666.229904.peg.1485 CDS CP001733.2 1476344 1478737 2 + 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229904.peg.1486 CDS CP001733.2 1479036 1480943 3 + 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229904.peg.1487 CDS CP001733.2 1480986 1481507 3 + 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229904.peg.1488 CDS CP001733.2 1481646 1483076 3 + 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229904.peg.1489 CDS CP001733.2 1483079 1484404 2 + 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229904.peg.1490 CDS CP001733.2 1484391 1485530 3 + 1140 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229904.peg.1491 CDS CP001733.2 1485532 1486203 1 + 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229904.peg.1492 CDS CP001733.2 1486193 1486684 2 + 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229904.peg.1493 CDS CP001733.2 1486691 1487002 2 + 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229904.peg.1494 CDS CP001733.2 1487330 1487995 2 + 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229904.peg.1495 CDS CP001733.2 1488159 1488001 -3 - 159 hypothetical protein - none -
fig|6666666.229904.peg.1496 CDS CP001733.2 1489335 1488187 -3 - 1149 Mobile element protein - none -
fig|6666666.229904.peg.1497 CDS CP001733.2 1490487 1489435 -3 - 1053 putative inner membrane protein - none -
fig|6666666.229904.peg.1498 CDS CP001733.2 1494706 1490795 -1 - 3912 HrpA-like helicases - none -
fig|6666666.229904.peg.1499 CDS CP001733.2 1495092 1494703 -3 - 390 COG2363 - none -
fig|6666666.229904.peg.1500 CDS CP001733.2 1495545 1495093 -3 - 453 putative membrane protein - none -
fig|6666666.229904.peg.1501 CDS CP001733.2 1495999 1495670 -1 - 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229904.peg.1502 CDS CP001733.2 1497381 1496341 -3 - 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229904.peg.1503 CDS CP001733.2 1497867 1500920 3 + 3054 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229904.peg.1504 CDS CP001733.2 1500930 1501352 3 + 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229904.peg.1505 CDS CP001733.2 1501345 1502409 1 + 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229904.peg.1506 CDS CP001733.2 1502450 1502950 2 + 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229904.peg.1507 CDS CP001733.2 1504300 1503155 -1 - 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229904.peg.1508 CDS CP001733.2 1505159 1504356 -2 - 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229904.peg.1509 CDS CP001733.2 1506192 1505314 -3 - 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229904.peg.1510 CDS CP001733.2 1507071 1506202 -3 - 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229904.peg.1511 CDS CP001733.2 1507968 1507081 -3 - 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229904.peg.1512 CDS CP001733.2 1508683 1507982 -1 - 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229904.peg.1513 CDS CP001733.2 1508924 1509910 2 + 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229904.peg.1514 CDS CP001733.2 1509974 1511824 2 + 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229904.peg.1515 CDS CP001733.2 1511963 1513093 2 + 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229904.peg.1516 CDS CP001733.2 1513343 1514809 2 + 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229904.peg.1517 CDS CP001733.2 1516555 1515485 -1 - 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229904.peg.1518 CDS CP001733.2 1518824 1516782 -2 - 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229904.peg.1519 CDS CP001733.2 1520467 1519436 -1 - 1032 putative membrane protein - none -
fig|6666666.229904.peg.1520 CDS CP001733.2 1521147 1520482 -3 - 666 putative exported protein - none -
fig|6666666.229904.peg.1521 CDS CP001733.2 1521550 1523196 1 + 1647 ABC transporter ATP-binding protein - none -
fig|6666666.229904.peg.1522 CDS CP001733.2 1524187 1523300 -1 - 888 putative adhesin/invasin - none -
fig|6666666.229904.peg.1523 CDS CP001733.2 1524690 1526588 3 + 1899 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229904.peg.1524 CDS CP001733.2 1526941 1527117 1 + 177 hypothetical protein - none -
fig|6666666.229904.peg.1525 CDS CP001733.2 1527125 1529380 2 + 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229904.peg.1526 CDS CP001733.2 1529664 1530275 3 + 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229904.peg.1527 CDS CP001733.2 1531036 1530326 -1 - 711 hypothetical protein - none -
fig|6666666.229904.peg.1528 CDS CP001733.2 1531719 1531042 -3 - 678 FIG00904286: hypothetical protein - none -
fig|6666666.229904.peg.1529 CDS CP001733.2 1531860 1532213 3 + 354 Bona fide RidA/YjgF/TdcF/RutC subgroup - none -
fig|6666666.229904.peg.1530 CDS CP001733.2 1533128 1532283 -2 - 846 hypothetical protein - none -
fig|6666666.229904.peg.1531 CDS CP001733.2 1534574 1533804 -2 - 771 Glycosyltransferase - none -
fig|6666666.229904.peg.1532 CDS CP001733.2 1535790 1534900 -3 - 891 hypothetical protein - none -
fig|6666666.229904.peg.1533 CDS CP001733.2 1536317 1535793 -2 - 525 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229904.peg.1534 CDS CP001733.2 1537837 1536434 -1 - 1404 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229904.peg.1535 CDS CP001733.2 1538481 1537870 -3 - 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229904.peg.1536 CDS CP001733.2 1539459 1538503 -3 - 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229904.peg.1537 CDS CP001733.2 1540342 1539575 -1 - 768 Putative membrane protein YfcA - none -
fig|6666666.229904.peg.1538 CDS CP001733.2 1541218 1540346 -1 - 873 Murein endopeptidase - none -
fig|6666666.229904.peg.1539 CDS CP001733.2 1542313 1541240 -1 - 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229904.peg.1540 CDS CP001733.2 1545658 1542335 -1 - 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229904.peg.1541 CDS CP001733.2 1547082 1545667 -3 - 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229904.peg.1542 CDS CP001733.2 1547705 1547088 -2 - 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229904.peg.1543 CDS CP001733.2 1547792 1548592 2 + 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229904.peg.1544 CDS CP001733.2 1549024 1549548 1 + 525 Flavodoxin 1 Flavodoxin
fig|6666666.229904.peg.1545 CDS CP001733.2 1549567 1550007 1 + 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229904.peg.1546 CDS CP001733.2 1550175 1552838 3 + 2664 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229904.peg.1547 CDS CP001733.2 1552906 1553256 1 + 351 FIG00782386: hypothetical protein - none -
fig|6666666.229904.peg.1548 CDS CP001733.2 1553607 1553290 -3 - 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229904.peg.1549 CDS CP001733.2 1554305 1553613 -2 - 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229904.peg.1550 CDS CP001733.2 1555525 1554335 -1 - 1191 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229904.peg.1551 CDS CP001733.2 1555821 1555525 -3 - 297 Inner membrane protein yciS - none -
fig|6666666.229904.peg.1552 CDS CP001733.2 1556207 1555920 -2 - 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229904.peg.1553 CDS CP001733.2 1557915 1556269 -3 - 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.229904.peg.1554 CDS CP001733.2 1558690 1558013 -1 - 678 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229904.peg.1555 CDS CP001733.2 1559576 1558683 -2 - 894 Membrane protein LAPB - none -
fig|6666666.229904.peg.1556 CDS CP001733.2 1559869 1562235 1 + 2367 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229904.peg.1557 CDS CP001733.2 1562313 1565087 3 + 2775 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229904.peg.1558 CDS CP001733.2 1565486 1565154 -2 - 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229904.peg.1559 CDS CP001733.2 1566098 1565487 -2 - 612 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229904.peg.1560 CDS CP001733.2 1566214 1566095 -1 - 120 hypothetical protein - none -
fig|6666666.229904.peg.1561 CDS CP001733.2 1567151 1566219 -2 - 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229904.peg.1562 CDS CP001733.2 1567451 1569724 2 + 2274 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229904.peg.1563 CDS CP001733.2 1572002 1570155 -2 - 1848 helicase (Snf2/Rad54 family) - none -
fig|6666666.229904.peg.1564 CDS CP001733.2 1572398 1572219 -2 - 180 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229904.peg.1565 CDS CP001733.2 1572952 1573614 1 + 663 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229904.peg.1566 CDS CP001733.2 1573700 1574029 2 + 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) CBSS-326442.4.peg.1852;
Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229904.peg.1567 CDS CP001733.2 1574127 1575008 3 + 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229904.peg.1568 CDS CP001733.2 1575008 1575898 2 + 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229904.peg.1569 CDS CP001733.2 1575898 1576755 1 + 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229904.peg.1570 CDS CP001733.2 1576752 1577600 3 + 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229904.peg.1571 CDS CP001733.2 1577847 1577575 -3 - 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229904.peg.1572 CDS CP001733.2 1577992 1578666 1 + 675 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229904.peg.1573 CDS CP001733.2 1578729 1579187 3 + 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229904.peg.1574 CDS CP001733.2 1579187 1579660 2 + 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229904.peg.1575 CDS CP001733.2 1579669 1581810 1 + 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229904.peg.1576 CDS CP001733.2 1582139 1581807 -2 - 333 FIG001674: hypothetical protein - none -
fig|6666666.229904.peg.1577 CDS CP001733.2 1582314 1582153 -3 - 162 FIG001674: hypothetical protein - none -
fig|6666666.229904.peg.1578 CDS CP001733.2 1582377 1583327 3 + 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p YrdC-YciO-Sua5 protein family
fig|6666666.229904.peg.1579 CDS CP001733.2 1584438 1583494 -3 - 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229904.peg.1580 CDS CP001733.2 1585252 1584428 -1 - 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229904.peg.1581 CDS CP001733.2 1586470 1585262 -1 - 1209 FIG00732228: membrane protein - none -
fig|6666666.229904.peg.1582 CDS CP001733.2 1586616 1586479 -3 - 138 FIG00732228: membrane protein - none -
fig|6666666.229904.peg.1583 CDS CP001733.2 1586902 1586633 -1 - 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229904.peg.1584 CDS CP001733.2 1588130 1587132 -2 - 999 FIG00781545: hypothetical protein - none -
fig|6666666.229904.peg.1585 CDS CP001733.2 1590334 1588391 -1 - 1944 ABC transporter ATP-binding protein - none -
fig|6666666.229904.peg.1586 CDS CP001733.2 1591728 1590376 -3 - 1353 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.229904.peg.1587 CDS CP001733.2 1592422 1591730 -1 - 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229904.peg.1588 CDS CP001733.2 1592781 1592422 -3 - 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229904.peg.1589 CDS CP001733.2 1593251 1593751 2 + 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229904.peg.1590 CDS CP001733.2 1593757 1594953 1 + 1197 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229904.peg.1591 CDS CP001733.2 1594950 1595330 3 + 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229904.peg.1592 CDS CP001733.2 1596804 1595374 -3 - 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229904.peg.1593 CDS CP001733.2 1596918 1597853 3 + 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229904.peg.1594 CDS CP001733.2 1598474 1597911 -2 - 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229904.peg.1595 CDS CP001733.2 1599085 1598474 -1 - 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229904.peg.1596 CDS CP001733.2 1599540 1599094 -3 - 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229904.peg.1597 CDS CP001733.2 1600490 1599564 -2 - 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229904.peg.1598 CDS CP001733.2 1601833 1601012 -1 - 822 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229904.peg.1599 CDS CP001733.2 1603635 1605017 3 + 1383 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229904.peg.1600 CDS CP001733.2 1606262 1605105 -2 - 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229904.peg.1601 CDS CP001733.2 1608021 1606345 -3 - 1677 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229904.peg.1602 CDS CP001733.2 1608621 1608064 -3 - 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229904.peg.1603 CDS CP001733.2 1609376 1608654 -2 - 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229904.peg.1604 CDS CP001733.2 1611316 1609379 -1 - 1938 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229904.peg.1605 CDS CP001733.2 1611392 1612210 2 + 819 Aldose 1-epimerase - none -
fig|6666666.229904.peg.1606 CDS CP001733.2 1612620 1613477 3 + 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229904.peg.1607 CDS CP001733.2 1613537 1614490 2 + 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229904.peg.1608 CDS CP001733.2 1614596 1616359 2 + 1764 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229904.peg.1609 CDS CP001733.2 1616359 1618092 1 + 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229904.peg.1610 CDS CP001733.2 1618603 1618475 -1 - 129 hypothetical protein - none -
fig|6666666.229904.peg.1611 CDS CP001733.2 1619385 1618600 -3 - 786 serine/threonine protein kinase - none -
fig|6666666.229904.peg.1612 CDS CP001733.2 1620041 1619406 -2 - 636 unknown - none -
fig|6666666.229904.peg.1613 CDS CP001733.2 1620129 1620713 3 + 585 Putative lipoprotein yceB precursor - none -
fig|6666666.229904.peg.1614 CDS CP001733.2 1621084 1621365 1 + 282 Mobile element protein - none -
fig|6666666.229904.peg.1615 CDS CP001733.2 1622405 1621491 -2 - 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229904.peg.1616 CDS CP001733.2 1623189 1622455 -3 - 735 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229904.peg.1617 CDS CP001733.2 1623272 1623925 2 + 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229904.peg.1618 CDS CP001733.2 1624204 1624944 1 + 741 FIG00698611: hypothetical protein - none -
fig|6666666.229904.peg.1619 CDS CP001733.2 1625528 1625106 -2 - 423 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229904.peg.1620 CDS CP001733.2 1626133 1625591 -1 - 543 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229904.peg.1621 CDS CP001733.2 1626952 1626158 -1 - 795 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229904.peg.1622 CDS CP001733.2 1627755 1626952 -3 - 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229904.peg.1623 CDS CP001733.2 1629714 1628296 -3 - 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229904.peg.1624 CDS CP001733.2 1630633 1629677 -1 - 957 O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-) - none -
fig|6666666.229904.peg.1625 CDS CP001733.2 1631515 1630643 -1 - 873 Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.229904.peg.1626 CDS CP001733.2 1632607 1631573 -1 - 1035 Exopolysaccharide production protein ExoZ - none -
fig|6666666.229904.peg.1627 CDS CP001733.2 1633423 1632611 -1 - 813 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229904.peg.1628 CDS CP001733.2 1635326 1633428 -2 - 1899 Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L- rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.229904.peg.1629 CDS CP001733.2 1635984 1635334 -3 - 651 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) Rhamnose containing glycans
fig|6666666.229904.peg.1630 CDS CP001733.2 1636868 1636083 -2 - 786 O-antigen export system permease protein RfbD - none -
fig|6666666.229904.peg.1631 CDS CP001733.2 1637422 1636880 -1 - 543 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229904.peg.1632 CDS CP001733.2 1638309 1637425 -3 - 885 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229904.peg.1633 CDS CP001733.2 1639183 1638311 -1 - 873 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229904.peg.1634 CDS CP001733.2 1640328 1639261 -3 - 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229904.peg.1635 CDS CP001733.2 1641529 1640399 -1 - 1131 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229904.peg.1636 CDS CP001733.2 1641381 1641542 3 + 162 hypothetical protein - none -
fig|6666666.229904.peg.1637 CDS CP001733.2 1642340 1641531 -2 - 810 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229904.peg.1638 CDS CP001733.2 1643290 1642409 -1 - 882 Glycosyltransferase - none -
fig|6666666.229904.peg.1639 CDS CP001733.2 1644483 1643290 -3 - 1194 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229904.peg.1640 CDS CP001733.2 1645268 1644492 -2 - 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229904.peg.1641 CDS CP001733.2 1645399 1646931 1 + 1533 putative flippase - none -
fig|6666666.229904.peg.1642 CDS CP001733.2 1646928 1647884 3 + 957 Polysaccharide polymerization protein - none -
fig|6666666.229904.peg.1643 CDS CP001733.2 1647993 1648244 3 + 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229904.peg.1644 CDS CP001733.2 1648241 1648495 2 + 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229904.peg.1645 CDS CP001733.2 1648508 1649251 2 + 744 Probable transmembrane protein - none -
fig|6666666.229904.peg.1646 CDS CP001733.2 1649545 1650255 1 + 711 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229904.peg.1647 CDS CP001733.2 1652562 1650388 -3 - 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229904.peg.1648 CDS CP001733.2 1654079 1652730 -2 - 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229904.peg.1649 CDS CP001733.2 1654297 1654815 1 + 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.229904.peg.1650 CDS CP001733.2 1654934 1654812 -2 - 123 hypothetical protein - none -
fig|6666666.229904.peg.1651 CDS CP001733.2 1655883 1654885 -3 - 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229904.peg.1652 CDS CP001733.2 1656756 1655932 -3 - 825 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229904.peg.1653 CDS CP001733.2 1657043 1657216 2 + 174 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase;
Selenocysteine metabolism
fig|6666666.229904.peg.1654 CDS CP001733.2 1657293 1660088 3 + 2796 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229904.peg.1655 CDS CP001733.2 1660186 1661016 1 + 831 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229904.peg.1656 CDS CP001733.2 1661009 1661722 2 + 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229904.peg.1657 CDS CP001733.2 1661879 1661995 2 + 117 hypothetical protein - none -
fig|6666666.229904.peg.1658 CDS CP001733.2 1664635 1662350 -1 - 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229904.peg.1659 CDS CP001733.2 1664931 1665530 3 + 600 Hydrogenase-4 component A - none -
fig|6666666.229904.peg.1660 CDS CP001733.2 1665563 1665991 2 + 429 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229904.peg.1661 CDS CP001733.2 1665963 1667585 3 + 1623 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229904.peg.1662 CDS CP001733.2 1667596 1668558 1 + 963 Hydrogenase-4 component C - none -
fig|6666666.229904.peg.1663 CDS CP001733.2 1668571 1670016 1 + 1446 Hydrogenase-4 component D - none -
fig|6666666.229904.peg.1664 CDS CP001733.2 1670027 1670665 2 + 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229904.peg.1665 CDS CP001733.2 1670670 1672208 3 + 1539 Hydrogenase-4 component F - none -
fig|6666666.229904.peg.1666 CDS CP001733.2 1672228 1673958 1 + 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229904.peg.1667 CDS CP001733.2 1673972 1674619 2 + 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229904.peg.1668 CDS CP001733.2 1674616 1675392 1 + 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229904.peg.1669 CDS CP001733.2 1675527 1675931 3 + 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229904.peg.1670 CDS CP001733.2 1675921 1676382 1 + 462 Hydrogenase 3 maturation protease (EC 3.4.-.-) - none -
fig|6666666.229904.peg.1671 CDS CP001733.2 1676911 1679133 1 + 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229904.peg.1674 CDS CP001733.2 1680176 1679304 -2 - 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229904.peg.1675 CDS CP001733.2 1681356 1680187 -3 - 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229904.peg.1676 CDS CP001733.2 1682766 1681543 -3 - 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229904.peg.1677 CDS CP001733.2 1685699 1682892 -2 - 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229904.peg.1678 CDS CP001733.2 1685784 1685906 3 + 123 hypothetical protein - none -
fig|6666666.229904.peg.1679 CDS CP001733.2 1686616 1685978 -1 - 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229904.peg.1680 CDS CP001733.2 1687139 1686693 -2 - 447 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229904.peg.1681 CDS CP001733.2 1688826 1687318 -3 - 1509 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229904.peg.1682 CDS CP001733.2 1690964 1688904 -2 - 2061 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229904.peg.1683 CDS CP001733.2 1691646 1691038 -3 - 609 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229904.peg.1684 CDS CP001733.2 1691864 1693147 2 + 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229904.peg.1685 CDS CP001733.2 1693110 1695767 3 + 2658 Paraquat-inducible protein B Oxidative stress
fig|6666666.229904.peg.1686 CDS CP001733.2 1697087 1695843 -2 - 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229904.peg.1687 CDS CP001733.2 1697351 1698469 2 + 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229904.peg.1688 CDS CP001733.2 1698453 1699313 3 + 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229904.peg.1689 CDS CP001733.2 1699313 1700086 2 + 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229904.peg.1690 CDS CP001733.2 1700217 1701314 3 + 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229904.peg.1691 CDS CP001733.2 1701436 1702332 1 + 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229904.peg.1692 CDS CP001733.2 1702430 1702317 -2 - 114 hypothetical protein - none -
fig|6666666.229904.peg.1693 CDS CP001733.2 1703727 1702411 -3 - 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229904.peg.1694 CDS CP001733.2 1704035 1705702 2 + 1668 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229904.peg.1695 CDS CP001733.2 1707539 1706199 -2 - 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229904.peg.1696 CDS CP001733.2 1708169 1707552 -2 - 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229904.peg.1697 CDS CP001733.2 1711006 1708262 -1 - 2745 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229904.peg.1698 CDS CP001733.2 1711489 1711010 -1 - 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229904.peg.1699 CDS CP001733.2 1713401 1712028 -2 - 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229904.peg.1700 CDS CP001733.2 1714558 1713404 -1 - 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229904.peg.1701 CDS CP001733.2 1714723 1715403 1 + 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229904.peg.1702 CDS CP001733.2 1715429 1716694 2 + 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229904.peg.1703 CDS CP001733.2 1716763 1717374 1 + 612 SH3 domain protein - none -
fig|6666666.229904.peg.1704 CDS CP001733.2 1717374 1718678 3 + 1305 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229904.peg.1705 CDS CP001733.2 1718713 1719336 1 + 624 Outer membrane lipoprotein LolB precursor - none -
fig|6666666.229904.peg.1706 CDS CP001733.2 1719336 1720247 3 + 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229904.peg.1707 CDS CP001733.2 1720288 1721238 1 + 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229904.peg.1708 CDS CP001733.2 1721414 1721560 2 + 147 hypothetical protein - none -
fig|6666666.229904.peg.1709 CDS CP001733.2 1721866 1723011 1 + 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229904.peg.1710 CDS CP001733.2 1723254 1724843 3 + 1590 L-lactate permease Lactate utilization
fig|6666666.229904.peg.1711 CDS CP001733.2 1725330 1724998 -3 - 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229904.peg.1712 CDS CP001733.2 1725355 1725471 1 + 117 hypothetical protein - none -
fig|6666666.229904.peg.1713 CDS CP001733.2 1725530 1726612 2 + 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229904.peg.1714 CDS CP001733.2 1726639 1727784 1 + 1146 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229904.peg.1715 CDS CP001733.2 1727795 1729126 2 + 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229904.peg.1716 CDS CP001733.2 1729672 1729205 -1 - 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229904.peg.1717 CDS CP001733.2 1729740 1730501 3 + 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229904.peg.1718 CDS CP001733.2 1730949 1731203 3 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229904.peg.1719 CDS CP001733.2 1731193 1731483 1 + 291 StbE replicon stabilization toxin - none -
fig|6666666.229904.peg.1720 CDS CP001733.2 1731879 1731541 -3 - 339 conserved hypothetical protein - none -
fig|6666666.229904.peg.1721 CDS CP001733.2 1732307 1732672 2 + 366 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229904.peg.1722 CDS CP001733.2 1732843 1734231 1 + 1389 Putative protease - none -
fig|6666666.229904.peg.1723 CDS CP001733.2 1734528 1735619 3 + 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229904.peg.1724 CDS CP001733.2 1736799 1735663 -3 - 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229904.peg.1725 CDS CP001733.2 1737272 1738423 2 + 1152 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229904.peg.1726 CDS CP001733.2 1738558 1738698 1 + 141 hypothetical protein - none -
fig|6666666.229904.peg.1727 CDS CP001733.2 1738715 1739014 2 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229904.peg.1728 CDS CP001733.2 1739078 1740895 2 + 1818 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229904.peg.1729 CDS CP001733.2 1740912 1741877 3 + 966 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229904.peg.1730 CDS CP001733.2 1742097 1744724 3 + 2628 Iron siderophore receptor protein - none -
fig|6666666.229904.peg.1731 CDS CP001733.2 1744971 1744795 -3 - 177 hypothetical protein - none -
fig|6666666.229904.peg.1732 CDS CP001733.2 1745074 1747695 1 + 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229904.peg.1733 CDS CP001733.2 1748731 1747778 -1 - 954 Inositol transport system permease protein - none -
fig|6666666.229904.peg.1734 CDS CP001733.2 1748870 1749778 2 + 909 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) - none -
fig|6666666.229904.peg.1735 CDS CP001733.2 1750394 1749882 -2 - 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229904.peg.1736 CDS CP001733.2 1751620 1750472 -1 - 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229904.peg.1737 CDS CP001733.2 1753578 1751698 -3 - 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229904.peg.1738 CDS CP001733.2 1753876 1753721 -1 - 156 hypothetical protein - none -
fig|6666666.229904.peg.1739 CDS CP001733.2 1755422 1753989 -2 - 1434 Microcin H47 secretion protein - none -
fig|6666666.229904.peg.1740 CDS CP001733.2 1757560 1755437 -1 - 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229904.peg.1741 CDS CP001733.2 1760796 1757629 -3 - 3168 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229904.peg.1742 CDS CP001733.2 1761315 1760809 -3 - 507 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229904.peg.1743 CDS CP001733.2 1763684 1762422 -2 - 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis;
YrdC-YciO-Sua5 protein family
fig|6666666.229904.peg.1744 CDS CP001733.2 1764361 1763819 -1 - 543 hypothetical protein - none -
fig|6666666.229904.peg.1745 CDS CP001733.2 1764739 1764599 -1 - 141 hypothetical protein - none -
fig|6666666.229904.peg.1746 CDS CP001733.2 1764891 1764742 -3 - 150 hypothetical protein - none -
fig|6666666.229904.peg.1747 CDS CP001733.2 1765982 1764978 -2 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229904.peg.1748 CDS CP001733.2 1766038 1766487 1 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229904.peg.1749 CDS CP001733.2 1766497 1766940 1 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229904.peg.1750 CDS CP001733.2 1770358 1766942 -1 - 3417 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229904.peg.1751 CDS CP001733.2 1770672 1770370 -3 - 303 FIG00696353: hypothetical protein - none -
fig|6666666.229904.peg.1752 CDS CP001733.2 1771342 1770647 -1 - 696 FIG00696574: hypothetical protein - none -
fig|6666666.229904.peg.1753 CDS CP001733.2 1771730 1771371 -2 - 360 Type II secretory pathway, component PulJ - none -
fig|6666666.229904.peg.1754 CDS CP001733.2 1772361 1771744 -3 - 618 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229904.peg.1755 CDS CP001733.2 1773437 1772970 -2 - 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229904.peg.1756 CDS CP001733.2 1774732 1773452 -1 - 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229904.peg.1757 CDS CP001733.2 1775975 1774767 -2 - 1209 TolA protein Ton and Tol transport systems
fig|6666666.229904.peg.1758 CDS CP001733.2 1776414 1775992 -3 - 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229904.peg.1759 CDS CP001733.2 1777189 1776500 -1 - 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229904.peg.1760 CDS CP001733.2 1777623 1777219 -3 - 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229904.peg.1761 CDS CP001733.2 1777688 1777807 2 + 120 hypothetical protein - none -
fig|6666666.229904.peg.1762 CDS CP001733.2 1779268 1778132 -1 - 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229904.peg.1763 CDS CP001733.2 1780764 1779283 -3 - 1482 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229904.peg.1764 CDS CP001733.2 1781300 1781611 2 + 312 Chromosome segregation ATPases - none -
fig|6666666.229904.peg.1765 CDS CP001733.2 1782684 1781665 -3 - 1020 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229904.peg.1766 CDS CP001733.2 1783307 1782693 -2 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229904.peg.1767 CDS CP001733.2 1783943 1783371 -2 - 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229904.peg.1768 CDS CP001733.2 1784409 1783999 -3 - 411 excinuclease ABC subunit A - none -
fig|6666666.229904.peg.1769 CDS CP001733.2 1785161 1784421 -2 - 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229904.peg.1770 CDS CP001733.2 1785566 1785195 -2 - 372 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) Folate Biosynthesis
fig|6666666.229904.peg.1771 CDS CP001733.2 1787015 1785747 -2 - 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229904.peg.1772 CDS CP001733.2 1787233 1787373 1 + 141 hypothetical protein - none -
fig|6666666.229904.peg.1773 CDS CP001733.2 1789185 1787407 -3 - 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229904.peg.1774 CDS CP001733.2 1789393 1789920 1 + 528 membrane protein, putative - none -
fig|6666666.229904.peg.1775 CDS CP001733.2 1789992 1790717 3 + 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229904.peg.1776 CDS CP001733.2 1791144 1791004 -3 - 141 transposase - none -
fig|6666666.229904.peg.1777 CDS CP001733.2 1793890 1791413 -1 - 2478 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229904.peg.1778 CDS CP001733.2 1794432 1794100 -3 - 333 hypothetical protein - none -
fig|6666666.229904.peg.1779 CDS CP001733.2 1794660 1795640 3 + 981 Mobile element protein - none -
fig|6666666.229904.peg.1780 CDS CP001733.2 1795640 1795798 2 + 159 ATPase involved in DNA repair - none -
fig|6666666.229904.peg.1781 CDS CP001733.2 1798788 1796221 -3 - 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229904.peg.1782 CDS CP001733.2 1800262 1798931 -1 - 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229904.peg.1783 CDS CP001733.2 1800663 1802615 3 + 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229904.peg.1784 CDS CP001733.2 1802774 1803181 2 + 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229904.peg.1785 CDS CP001733.2 1803268 1803921 1 + 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229904.peg.1786 CDS CP001733.2 1804273 1805625 1 + 1353 Histidine permease YuiF - none -
fig|6666666.229904.peg.1787 CDS CP001733.2 1805689 1806255 1 + 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229904.peg.1788 CDS CP001733.2 1807736 1806312 -2 - 1425 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229904.peg.1789 CDS CP001733.2 1807844 1807972 2 + 129 hypothetical protein - none -
fig|6666666.229904.peg.1790 CDS CP001733.2 1808080 1808223 1 + 144 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) CBSS-87626.3.peg.3639;
Ubiquinone Biosynthesis
fig|6666666.229904.peg.1791 CDS CP001733.2 1809668 1808937 -2 - 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229904.peg.1792 CDS CP001733.2 1810659 1809670 -3 - 990 Octaprenyl diphosphate synthase (EC 2.5.1.90) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229904.peg.1793 CDS CP001733.2 1810907 1811218 2 + 312 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229904.peg.1794 CDS CP001733.2 1811239 1811496 1 + 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229904.peg.1795 CDS CP001733.2 1811568 1812491 3 + 924 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229904.peg.1796 CDS CP001733.2 1812569 1813486 2 + 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229904.peg.1797 CDS CP001733.2 1813523 1814698 2 + 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229904.peg.1798 CDS CP001733.2 1814814 1814695 -3 - 120 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229904.peg.1799 CDS CP001733.2 1815248 1814766 -2 - 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229904.peg.1800 CDS CP001733.2 1815593 1815456 -2 - 138 hypothetical protein - none -
fig|6666666.229904.peg.1801 CDS CP001733.2 1815616 1816464 1 + 849 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229904.peg.1802 CDS CP001733.2 1816541 1817239 2 + 699 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229904.peg.1803 CDS CP001733.2 1817340 1818260 3 + 921 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229904.peg.1804 CDS CP001733.2 1818270 1819208 3 + 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229904.peg.1805 CDS CP001733.2 1819218 1820201 3 + 984 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229904.peg.1806 CDS CP001733.2 1820198 1821196 2 + 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229904.peg.1807 CDS CP001733.2 1822010 1821303 -2 - 708 Aerobic respiration control protein arcA - none -
fig|6666666.229904.peg.1808 CDS CP001733.2 1822687 1822421 -1 - 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229904.peg.1809 CDS CP001733.2 1823468 1822899 -2 - 570 Lysine decarboxylase family - none -
fig|6666666.229904.peg.1810 CDS CP001733.2 1823611 1825401 1 + 1791 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229904.peg.1811 CDS CP001733.2 1825503 1825390 -3 - 114 hypothetical protein - none -
fig|6666666.229904.peg.1812 CDS CP001733.2 1825481 1825870 2 + 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229904.peg.1813 CDS CP001733.2 1829150 1826268 -2 - 2883 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229904.peg.1814 CDS CP001733.2 1829393 1829515 2 + 123 hypothetical protein - none -
fig|6666666.229904.peg.1815 CDS CP001733.2 1829625 1830584 3 + 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229904.peg.1816 CDS CP001733.2 1830998 1830783 -2 - 216 Thioredoxin - none -
fig|6666666.229904.peg.1817 CDS CP001733.2 1832201 1831206 -2 - 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229904.peg.1818 CDS CP001733.2 1833355 1832225 -1 - 1131 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229904.peg.1819 CDS CP001733.2 1834335 1835036 3 + 702 Peptidoglycan hydrolase VirB1, involved in T-DNA transfer - none -
fig|6666666.229904.peg.1820 CDS CP001733.2 1835051 1835353 2 + 303 Major pilus subunit of type IV secretion complex, VirB2 - none -
fig|6666666.229904.peg.1821 CDS CP001733.2 1835630 1837321 2 + 1692 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229904.peg.1822 CDS CP001733.2 1837324 1837521 1 + 198 hypothetical protein - none -
fig|6666666.229904.peg.1823 CDS CP001733.2 1838502 1837954 -3 - 549 putative membrane protein - none -
fig|6666666.229904.peg.1824 CDS CP001733.2 1838489 1838623 2 + 135 hypothetical protein - none -
fig|6666666.229904.peg.1825 CDS CP001733.2 1838638 1839402 1 + 765 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229904.peg.1826 CDS CP001733.2 1840673 1839666 -2 - 1008 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229904.peg.1827 CDS CP001733.2 1840831 1842204 1 + 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229904.peg.1828 CDS CP001733.2 1842584 1843702 2 + 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229904.peg.1829 CDS CP001733.2 1843702 1844472 1 + 771 HesA/MoeB/ThiF family protein related to EC-YgdL - none -
fig|6666666.229904.peg.1830 CDS CP001733.2 1844572 1845591 1 + 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229904.peg.1831 CDS CP001733.2 1845719 1846531 2 + 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229904.peg.1832 CDS CP001733.2 1847102 1846611 -2 - 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229904.peg.1833 CDS CP001733.2 1848057 1847113 -3 - 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229904.peg.1834 CDS CP001733.2 1848133 1848810 1 + 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229904.peg.1835 CDS CP001733.2 1848886 1848767 -1 - 120 hypothetical protein - none -
fig|6666666.229904.peg.1836 CDS CP001733.2 1849183 1848920 -1 - 264 SSU ribosomal protein S20p - none -
fig|6666666.229904.peg.1837 CDS CP001733.2 1849451 1851028 2 + 1578 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229904.peg.1838 CDS CP001733.2 1851106 1852032 1 + 927 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229904.peg.1839 CDS CP001733.2 1852246 1852410 1 + 165 FIG01055344: hypothetical protein - none -
fig|6666666.229904.peg.1840 CDS CP001733.2 1852448 1855270 2 + 2823 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229904.peg.1841 CDS CP001733.2 1855350 1855844 3 + 495 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229904.peg.1842 CDS CP001733.2 1855844 1856788 2 + 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229904.peg.1843 CDS CP001733.2 1858551 1857253 -3 - 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229904.peg.1844 CDS CP001733.2 1859608 1858715 -1 - 894 Tyrosine recombinase XerD - none -
fig|6666666.229904.peg.1845 CDS CP001733.2 1860771 1859611 -3 - 1161 Probable 3-phenylpropionic acid transporter - none -
fig|6666666.229904.peg.1846 CDS CP001733.2 1861010 1860771 -2 - 240 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229904.peg.1847 CDS CP001733.2 1861474 1861016 -1 - 459 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229904.peg.1848 CDS CP001733.2 1861537 1862442 1 + 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229904.peg.1849 CDS CP001733.2 1862907 1862533 -3 - 375 opacity associated protein - none -
fig|6666666.229904.peg.1850 CDS CP001733.2 1864282 1862969 -1 - 1314 Cell envelope opacity-associated protein A - none -
fig|6666666.229904.peg.1851 CDS CP001733.2 1865484 1864453 -3 - 1032 Lysyl-lysine 2,3-aminomutase Translation elongation factor P lysylation
fig|6666666.229904.peg.1852 CDS CP001733.2 1865549 1866070 2 + 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229904.peg.1853 CDS CP001733.2 1866400 1867776 1 + 1377 Tyrosine phenol-lyase (EC 4.1.99.2) - none -
fig|6666666.229904.peg.1854 CDS CP001733.2 1867938 1869152 3 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229904.peg.1855 CDS CP001733.2 1869895 1869218 -1 - 678 YheO-like PAS domain - none -
fig|6666666.229904.peg.1856 CDS CP001733.2 1870464 1869958 -3 - 507 Arabinose efflux permease - none -
fig|6666666.229904.peg.1857 CDS CP001733.2 1871188 1870457 -1 - 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) Llipid A biosynthesis cluster
fig|6666666.229904.peg.1858 CDS CP001733.2 1871299 1872042 1 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.1859 CDS CP001733.2 1872050 1873462 2 + 1413 Putative cell division protein precursor - none -
fig|6666666.229904.peg.1860 CDS CP001733.2 1874396 1873533 -2 - 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229904.peg.1861 CDS CP001733.2 1875278 1874538 -2 - 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229904.peg.1862 CDS CP001733.2 1877735 1875423 -2 - 2313 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229904.peg.1863 CDS CP001733.2 1878655 1877834 -1 - 822 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229904.peg.1864 CDS CP001733.2 1878998 1879348 2 + 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229904.peg.1865 CDS CP001733.2 1879349 1879702 2 + 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229904.peg.1866 CDS CP001733.2 1879704 1880750 3 + 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229904.peg.1867 CDS CP001733.2 1880752 1881312 1 + 561 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229904.peg.1868 CDS CP001733.2 1881432 1881929 3 + 498 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229904.peg.1869 CDS CP001733.2 1882994 1882029 -2 - 966 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229904.peg.1870 CDS CP001733.2 1883976 1883056 -3 - 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229904.peg.1871 CDS CP001733.2 1884542 1883976 -2 - 567 FIG00696199: hypothetical protein - none -
fig|6666666.229904.peg.1872 CDS CP001733.2 1885323 1884544 -3 - 780 UPF0246 protein YaaA - none -
fig|6666666.229904.peg.1873 CDS CP001733.2 1886013 1885345 -3 - 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229904.peg.1874 CDS CP001733.2 1886299 1886682 1 + 384 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229904.peg.1875 CDS CP001733.2 1886846 1888642 2 + 1797 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229904.peg.1876 CDS CP001733.2 1888653 1889675 3 + 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229904.peg.1877 CDS CP001733.2 1889682 1890362 3 + 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229904.peg.1878 CDS CP001733.2 1890359 1891267 2 + 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.229904.peg.1879 CDS CP001733.2 1892726 1891371 -2 - 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229904.peg.1880 CDS CP001733.2 1894443 1892854 -3 - 1590 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229904.peg.1881 CDS CP001733.2 1894748 1894485 -2 - 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229904.peg.1882 CDS CP001733.2 1895038 1894703 -1 - 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229904.peg.1883 CDS CP001733.2 1895218 1895084 -1 - 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.229904.peg.1884 CDS CP001733.2 1895636 1896997 2 + 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229904.peg.1885 CDS CP001733.2 1897005 1898108 3 + 1104 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229904.peg.1886 CDS CP001733.2 1898112 1899188 3 + 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229904.peg.1887 CDS CP001733.2 1899990 1899235 -3 - 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229904.peg.1888 CDS CP001733.2 1900178 1900753 2 + 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229904.peg.1889 CDS CP001733.2 1901020 1901193 1 + 174 hypothetical protein - none -
fig|6666666.229904.peg.1890 CDS CP001733.2 1901235 1901399 3 + 165 Mobile element protein - none -
fig|6666666.229904.peg.1891 CDS CP001733.2 1901580 1901987 3 + 408 Mobile element protein - none -
fig|6666666.229904.peg.1892 CDS CP001733.2 1902448 1902197 -1 - 252 Transcriptional regulator, XRE family - none -
fig|6666666.229904.peg.1893 CDS CP001733.2 1902599 1904236 2 + 1638 NAD-dependent malic enzyme (EC 1.1.1.38) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229904.peg.1894 CDS CP001733.2 1905655 1904456 -1 - 1200 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229904.peg.1895 CDS CP001733.2 1906701 1905652 -3 - 1050 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229904.peg.1896 CDS CP001733.2 1907228 1906698 -2 - 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229904.peg.1897 CDS CP001733.2 1909131 1907221 -3 - 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229904.peg.1898 CDS CP001733.2 1909153 1909521 1 + 369 hypothetical protein - none -
fig|6666666.229904.peg.1899 CDS CP001733.2 1909597 1909472 -1 - 126 hypothetical protein - none -
fig|6666666.229904.peg.1900 CDS CP001733.2 1910683 1909718 -1 - 966 NrfD protein - none -
fig|6666666.229904.peg.1901 CDS CP001733.2 1911357 1910680 -3 - 678 NrfC protein - none -
fig|6666666.229904.peg.1902 CDS CP001733.2 1912019 1911354 -2 - 666 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229904.peg.1903 CDS CP001733.2 1913616 1912093 -3 - 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229904.peg.1904 CDS CP001733.2 1914483 1914193 -3 - 291 hypothetical protein - none -
fig|6666666.229904.peg.1905 CDS CP001733.2 1915124 1914501 -2 - 624 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229904.peg.1906 CDS CP001733.2 1916182 1915259 -1 - 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229904.peg.1907 CDS CP001733.2 1916634 1916182 -3 - 453 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229904.peg.1908 CDS CP001733.2 1917278 1916733 -2 - 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229904.peg.1909 CDS CP001733.2 1919265 1917307 -3 - 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229904.peg.1910 CDS CP001733.2 1919783 1919265 -2 - 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229904.peg.1911 CDS CP001733.2 1919953 1919780 -1 - 174 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229904.peg.1912 CDS CP001733.2 1920741 1920004 -3 - 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229904.peg.1913 CDS CP001733.2 1921417 1920752 -1 - 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229904.peg.1914 CDS CP001733.2 1922057 1921422 -2 - 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229904.peg.1915 CDS CP001733.2 1923014 1922229 -2 - 786 Bicyclomycin resistance protein - none -
fig|6666666.229904.peg.1916 CDS CP001733.2 1923421 1923011 -1 - 411 Bicyclomycin resistance protein - none -
fig|6666666.229904.peg.1917 CDS CP001733.2 1924127 1923426 -2 - 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229904.peg.1918 CDS CP001733.2 1924169 1924351 2 + 183 hypothetical protein - none -
fig|6666666.229904.peg.1919 CDS CP001733.2 1924344 1926608 3 + 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229904.peg.1920 CDS CP001733.2 1926753 1927397 3 + 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229904.peg.1921 CDS CP001733.2 1927808 1928599 2 + 792 putative lipoprotein - none -
fig|6666666.229904.peg.1922 CDS CP001733.2 1929628 1928801 -1 - 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229904.peg.1923 CDS CP001733.2 1929768 1930211 3 + 444 FIG00904084: hypothetical protein - none -
fig|6666666.229904.peg.1924 CDS CP001733.2 1930897 1930301 -1 - 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.1925 CDS CP001733.2 1930994 1931347 2 + 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229904.peg.1926 CDS CP001733.2 1931368 1932798 1 + 1431 Transglycosylase, Slt family - none -
fig|6666666.229904.peg.1927 CDS CP001733.2 1932809 1932955 2 + 147 hypothetical protein - none -
fig|6666666.229904.peg.1928 CDS CP001733.2 1933537 1932998 -1 - 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229904.peg.1929 CDS CP001733.2 1934937 1933561 -3 - 1377 Na+/H+ antiporter NhaB - none -
fig|6666666.229904.peg.1930 CDS CP001733.2 1935300 1936031 3 + 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229904.peg.1931 CDS CP001733.2 1937366 1936152 -2 - 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229904.peg.1932 CDS CP001733.2 1937483 1938787 2 + 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229904.peg.1933 CDS CP001733.2 1938778 1940484 1 + 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229904.peg.1934 CDS CP001733.2 1940537 1941286 2 + 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229904.peg.1935 CDS CP001733.2 1941382 1941651 1 + 270 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.229904.peg.1936 CDS CP001733.2 1941859 1943013 1 + 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229904.peg.1937 CDS CP001733.2 1943082 1943582 3 + 501 Protein sprT - none -
fig|6666666.229904.peg.1938 CDS CP001733.2 1943739 1944980 3 + 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229904.peg.1939 CDS CP001733.2 1945073 1946437 2 + 1365 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229904.peg.1940 CDS CP001733.2 1947667 1946618 -1 - 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229904.peg.1941 CDS CP001733.2 1947962 1949101 2 + 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229904.peg.1942 CDS CP001733.2 1949123 1949674 2 + 552 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229904.peg.1943 CDS CP001733.2 1949818 1950873 1 + 1056 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229904.peg.1944 CDS CP001733.2 1950885 1951988 3 + 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229904.peg.1945 CDS CP001733.2 1952010 1953287 3 + 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229904.peg.1946 CDS CP001733.2 1953298 1953912 1 + 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229904.peg.1947 CDS CP001733.2 1953965 1954417 2 + 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229904.peg.1948 CDS CP001733.2 1955127 1954423 -3 - 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229904.peg.1949 CDS CP001733.2 1955113 1955250 1 + 138 hypothetical protein - none -
fig|6666666.229904.peg.1950 CDS CP001733.2 1956500 1955247 -2 - 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229904.peg.1951 CDS CP001733.2 1957250 1956624 -2 - 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229904.peg.1952 CDS CP001733.2 1959232 1957385 -1 - 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229904.peg.1953 CDS CP001733.2 1961638 1959365 -1 - 2274 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229904.peg.1954 CDS CP001733.2 1961766 1961635 -3 - 132 hypothetical protein - none -
fig|6666666.229904.peg.1955 CDS CP001733.2 1961870 1963471 2 + 1602 Dca - none -
fig|6666666.229904.peg.1956 CDS CP001733.2 1963728 1964294 3 + 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229904.peg.1957 CDS CP001733.2 1964304 1965545 3 + 1242 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229904.peg.1958 CDS CP001733.2 1965931 1965608 -1 - 324 FIG074102: hypothetical protein - none -
fig|6666666.229904.peg.1959 CDS CP001733.2 1966088 1965924 -2 - 165 Phage-related protein - none -
fig|6666666.229904.peg.1960 CDS CP001733.2 1967236 1966391 -1 - 846 membrane protein, putative - none -
fig|6666666.229904.peg.1961 CDS CP001733.2 1969468 1967309 -1 - 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229904.peg.1962 CDS CP001733.2 1969767 1969555 -3 - 213 Copper chaperone Copper homeostasis
fig|6666666.229904.peg.1963 CDS CP001733.2 1969862 1970248 2 + 387 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229904.peg.1964 CDS CP001733.2 1970519 1971601 2 + 1083 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229904.peg.1965 CDS CP001733.2 1971615 1971836 3 + 222 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229904.peg.1966 CDS CP001733.2 1973000 1972164 -2 - 837 COG1720: Uncharacterized conserved protein tRNA modification Bacteria
fig|6666666.229904.peg.1967 CDS CP001733.2 1973128 1974033 1 + 906 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229904.peg.1968 CDS CP001733.2 1974084 1974584 3 + 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229904.peg.1969 CDS CP001733.2 1974605 1974769 2 + 165 hypothetical protein - none -
fig|6666666.229904.peg.1970 CDS CP001733.2 1974774 1975739 3 + 966 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229904.peg.1971 CDS CP001733.2 1976246 1975713 -2 - 534 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229904.peg.1972 CDS CP001733.2 1976367 1977728 3 + 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229904.peg.1973 CDS CP001733.2 1977967 1978506 1 + 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229904.peg.1974 CDS CP001733.2 1979715 1978576 -3 - 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229904.peg.1975 CDS CP001733.2 1980986 1979712 -2 - 1275 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229904.peg.1976 CDS CP001733.2 1982221 1981118 -1 - 1104 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229904.peg.1977 CDS CP001733.2 1982442 1983137 3 + 696 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229904.peg.1978 CDS CP001733.2 1985008 1983221 -1 - 1788 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229904.peg.1979 CDS CP001733.2 1986037 1985135 -1 - 903 Lipoprotein nlpI precursor - none -
fig|6666666.229904.peg.1980 CDS CP001733.2 1988380 1986122 -1 - 2259 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229904.peg.1981 CDS CP001733.2 1988545 1989015 1 + 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229904.peg.1982 CDS CP001733.2 1990142 1989489 -2 - 654 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229904.peg.1983 CDS CP001733.2 1990165 1990617 1 + 453 Type IV pilin PilA Type IV pilus
fig|6666666.229904.peg.1984 CDS CP001733.2 1990644 1992053 3 + 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229904.peg.1985 CDS CP001733.2 1992046 1993269 1 + 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229904.peg.1986 CDS CP001733.2 1993266 1993955 3 + 690 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229904.peg.1987 CDS CP001733.2 1994005 1994628 1 + 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229904.peg.1988 CDS CP001733.2 1994618 1994830 2 + 213 FIG003276: zinc-binding protein - none -
fig|6666666.229904.peg.1989 CDS CP001733.2 1994830 1995102 1 + 273 FIG00904058: hypothetical protein - none -
fig|6666666.229904.peg.1990 CDS CP001733.2 1995499 1996872 1 + 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229904.peg.1991 CDS CP001733.2 1997101 1997424 1 + 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229904.peg.1992 CDS CP001733.2 1997879 1998127 2 + 249 unknown - none -
fig|6666666.229904.peg.1993 CDS CP001733.2 1999042 1998743 -1 - 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229904.peg.1994 CDS CP001733.2 2000085 1999036 -3 - 1050 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229904.peg.1995 CDS CP001733.2 2001214 2000330 -1 - 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229904.peg.1996 CDS CP001733.2 2001769 2001227 -1 - 543 Protein involved in cell division - none -
fig|6666666.229904.peg.1997 CDS CP001733.2 2003224 2001788 -1 - 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229904.peg.1998 CDS CP001733.2 2003493 2003221 -3 - 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229904.peg.1999 CDS CP001733.2 2004959 2003517 -2 - 1443 FOG: TPR repeat - none -
fig|6666666.229904.peg.2000 CDS CP001733.2 2005788 2005024 -3 - 765 Periplasmic protein TonB, links inner and outer membranes - none -
fig|6666666.229904.peg.2001 CDS CP001733.2 2005977 2005843 -3 - 135 hypothetical protein - none -
fig|6666666.229904.peg.2002 CDS CP001733.2 2007432 2006086 -3 - 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229904.peg.2003 CDS CP001733.2 2007942 2007475 -3 - 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229904.peg.2004 CDS CP001733.2 2007959 2008111 2 + 153 hypothetical protein - none -
fig|6666666.229904.peg.2005 CDS CP001733.2 2008542 2008066 -3 - 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229904.peg.2006 CDS CP001733.2 2009642 2008641 -2 - 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229904.peg.2007 CDS CP001733.2 2009952 2009623 -3 - 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229904.peg.2008 CDS CP001733.2 2010353 2009934 -2 - 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229904.peg.2009 CDS CP001733.2 2011250 2010393 -2 - 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229904.peg.2010 CDS CP001733.2 2012129 2011362 -2 - 768 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229904.peg.2011 CDS CP001733.2 2012302 2012745 1 + 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229904.peg.2012 CDS CP001733.2 2014186 2012819 -1 - 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229904.peg.2013 CDS CP001733.2 2014639 2014205 -1 - 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229904.peg.2014 CDS CP001733.2 2015212 2014652 -1 - 561 Protein of unknown function DUF414 - none -
fig|6666666.229904.peg.2015 CDS CP001733.2 2015840 2015313 -2 - 528 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229904.peg.2016 CDS CP001733.2 2017017 2016166 -3 - 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229904.peg.2017 CDS CP001733.2 2017811 2017014 -2 - 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229904.peg.2018 CDS CP001733.2 2018617 2017820 -1 - 798 Protein of unknown function DUF81 - none -
fig|6666666.229904.peg.2019 CDS CP001733.2 2019219 2018620 -3 - 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229904.peg.2020 CDS CP001733.2 2019439 2019858 1 + 420 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229904.peg.2021 CDS CP001733.2 2019869 2021377 2 + 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229904.peg.2022 CDS CP001733.2 2021374 2022270 1 + 897 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229904.peg.2023 CDS CP001733.2 2022360 2023241 3 + 882 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229904.peg.2024 CDS CP001733.2 2023241 2023372 2 + 132 hypothetical protein - none -
fig|6666666.229904.peg.2025 CDS CP001733.2 2023324 2024256 1 + 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229904.peg.2026 CDS CP001733.2 2024563 2024354 -1 - 210 Cold shock protein CspG Cold shock, CspA family of proteins
fig|6666666.229904.peg.2027 CDS CP001733.2 2026455 2025010 -3 - 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229904.peg.2028 CDS CP001733.2 2027143 2027931 1 + 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229904.peg.2029 CDS CP001733.2 2028044 2029420 2 + 1377 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229904.peg.2030 CDS CP001733.2 2029721 2031070 2 + 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229904.peg.2031 CDS CP001733.2 2031559 2033013 1 + 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229904.peg.2032 CDS CP001733.2 2033845 2033687 -1 - 159 hypothetical protein - none -
fig|6666666.229904.peg.2033 CDS CP001733.2 2037619 2034143 -1 - 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229904.peg.2034 CDS CP001733.2 2037584 2037763 2 + 180 hypothetical protein - none -
fig|6666666.229904.peg.2035 CDS CP001733.2 2037818 2039605 2 + 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229904.peg.2036 CDS CP001733.2 2039622 2039738 3 + 117 hypothetical protein - none -
fig|6666666.229904.peg.2037 CDS CP001733.2 2040488 2045851 2 + 5364 Autotransporter adhesin - none -
fig|6666666.229904.peg.2038 CDS CP001733.2 2046105 2048231 3 + 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229904.peg.2039 CDS CP001733.2 2048412 2048531 3 + 120 hypothetical protein - none -
fig|6666666.229904.peg.2040 CDS CP001733.2 2048799 2048674 -3 - 126 hypothetical protein - none -
fig|6666666.229904.peg.2041 CDS CP001733.2 2048833 2049300 1 + 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229904.peg.2042 CDS CP001733.2 2050115 2049327 -2 - 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229904.peg.2043 CDS CP001733.2 2050399 2050118 -1 - 282 hypothetical protein - none -
fig|6666666.229904.peg.2044 CDS CP001733.2 2050547 2050392 -2 - 156 hypothetical protein - none -
fig|6666666.229904.peg.2045 CDS CP001733.2 2051153 2050641 -2 - 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229904.peg.2046 CDS CP001733.2 2051223 2052632 3 + 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229904.peg.2047 CDS CP001733.2 2053742 2052780 -2 - 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229904.peg.2048 CDS CP001733.2 2054445 2053807 -3 - 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229904.peg.2049 CDS CP001733.2 2054790 2054491 -3 - 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229904.peg.2050 CDS CP001733.2 2056053 2054863 -3 - 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229904.peg.2051 CDS CP001733.2 2056941 2056084 -3 - 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229904.peg.2052 CDS CP001733.2 2058111 2056990 -3 - 1122 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229904.peg.2053 CDS CP001733.2 2060059 2058098 -1 - 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229904.peg.2054 CDS CP001733.2 2060608 2060072 -1 - 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229904.peg.2055 CDS CP001733.2 2060907 2060599 -3 - 309 Iojap protein - none -
fig|6666666.229904.peg.2056 CDS CP001733.2 2062230 2060974 -3 - 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229904.peg.2057 CDS CP001733.2 2062555 2063793 1 + 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229904.peg.2058 CDS CP001733.2 2065153 2063918 -1 - 1236 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229904.peg.2059 CDS CP001733.2 2065240 2065353 1 + 114 hypothetical protein - none -
fig|6666666.229904.peg.2060 CDS CP001733.2 2065618 2065388 -1 - 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.2061 CDS CP001733.2 2066620 2065892 -1 - 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229904.peg.2062 CDS CP001733.2 2067583 2066645 -1 - 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229904.peg.2063 CDS CP001733.2 2068640 2067690 -2 - 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229904.peg.2064 CDS CP001733.2 2069706 2068687 -3 - 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229904.peg.2065 CDS CP001733.2 2069903 2069733 -2 - 171 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.229904.peg.2066 CDS CP001733.2 2070444 2069920 -3 - 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229904.peg.2067 CDS CP001733.2 2071043 2070516 -2 - 528 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229904.peg.2068 CDS CP001733.2 2071892 2071152 -2 - 741 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229904.peg.2069 CDS CP001733.2 2072491 2071910 -1 - 582 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229904.peg.2070 CDS CP001733.2 2073204 2072947 -3 - 258 hypothetical protein - none -
fig|6666666.229904.peg.2071 CDS CP001733.2 2073484 2073278 -1 - 207 hypothetical protein - none -
fig|6666666.229904.peg.2072 CDS CP001733.2 2073754 2073485 -1 - 270 hypothetical protein - none -
fig|6666666.229904.peg.2073 CDS CP001733.2 2074675 2073986 -1 - 690 hypothetical protein - none -
fig|6666666.229904.peg.2074 CDS CP001733.2 2074959 2074693 -3 - 267 hypothetical protein - none -
fig|6666666.229904.peg.2075 CDS CP001733.2 2075956 2075126 -1 - 831 FIG00697497: hypothetical protein - none -
fig|6666666.229904.peg.2076 CDS CP001733.2 2078865 2076082 -3 - 2784 FIG00696772: hypothetical protein - none -
fig|6666666.229904.peg.2077 CDS CP001733.2 2079041 2078865 -2 - 177 hypothetical protein - none -
fig|6666666.229904.peg.2078 CDS CP001733.2 2079320 2079075 -2 - 246 hypothetical protein - none -
fig|6666666.229904.peg.2079 CDS CP001733.2 2080142 2079333 -2 - 810 Phage FAD/FMN-containing dehydrogenase - none -
fig|6666666.229904.peg.2080 CDS CP001733.2 2081885 2080206 -2 - 1680 FIG00698772: hypothetical protein - none -
fig|6666666.229904.peg.2081 CDS CP001733.2 2082872 2081889 -2 - 984 hypothetical protein - none -
fig|6666666.229904.peg.2082 CDS CP001733.2 2083828 2082872 -1 - 957 Phage protein - none -
fig|6666666.229904.peg.2083 CDS CP001733.2 2087120 2083836 -2 - 3285 Phage tail length tape-measure protein Phage tail proteins;
Phage tail proteins 2
fig|6666666.229904.peg.2084 CDS CP001733.2 2087178 2087348 3 + 171 hypothetical protein - none -
fig|6666666.229904.peg.2085 CDS CP001733.2 2087549 2087364 -2 - 186 hypothetical protein - none -
fig|6666666.229904.peg.2086 CDS CP001733.2 2087977 2087552 -1 - 426 hypothetical protein - none -
fig|6666666.229904.peg.2087 CDS CP001733.2 2088809 2088063 -2 - 747 Phage protein - none -
fig|6666666.229904.peg.2088 CDS CP001733.2 2088987 2088796 -3 - 192 hypothetical protein - none -
fig|6666666.229904.peg.2089 CDS CP001733.2 2089423 2088989 -1 - 435 Mu-like prophage FluMu protein gp37 - none -
fig|6666666.229904.peg.2090 CDS CP001733.2 2089830 2089423 -3 - 408 Mu-like prophage protein GP36 - none -
fig|6666666.229904.peg.2091 CDS CP001733.2 2090261 2089830 -2 - 432 hypothetical protein - none -
fig|6666666.229904.peg.2092 CDS CP001733.2 2091264 2090338 -3 - 927 Phage major capsid protein Phage capsid proteins
fig|6666666.229904.peg.2093 CDS CP001733.2 2092336 2091257 -1 - 1080 Mu-like prophage FluMu I protein - none -
fig|6666666.229904.peg.2094 CDS CP001733.2 2092979 2092536 -2 - 444 G protein - none -
fig|6666666.229904.peg.2095 CDS CP001733.2 2094439 2093114 -1 - 1326 Phage (Mu-like) virion morphogenesis protein - none -
fig|6666666.229904.peg.2096 CDS CP001733.2 2096000 2094426 -2 - 1575 Mu-like prophage FluMu protein gp29 - none -
fig|6666666.229904.peg.2097 CDS CP001733.2 2097614 2096010 -2 - 1605 FIG00698398: hypothetical protein - none -
fig|6666666.229904.peg.2098 CDS CP001733.2 2098189 2097614 -1 - 576 Phage terminase small subunit Phage packaging machinery
fig|6666666.229904.peg.2099 CDS CP001733.2 2098511 2098212 -2 - 300 FIG00638990: hypothetical protein - none -
fig|6666666.229904.peg.2100 CDS CP001733.2 2098850 2098515 -2 - 336 Mu-like phage gp25 - none -
fig|6666666.229904.peg.2101 CDS CP001733.2 2099065 2098847 -1 - 219 hypothetical protein - none -
fig|6666666.229904.peg.2102 CDS CP001733.2 2099222 2099058 -2 - 165 hypothetical protein - none -
fig|6666666.229904.peg.2103 CDS CP001733.2 2099469 2099185 -3 - 285 hypothetical protein - none -
fig|6666666.229904.peg.2104 CDS CP001733.2 2099695 2099462 -1 - 234 FIG00696851: hypothetical protein - none -
fig|6666666.229904.peg.2105 CDS CP001733.2 2100543 2099998 -3 - 546 Negative regulator of beta-lactamase expression Beta-lactamase
fig|6666666.229904.peg.2106 CDS CP001733.2 2101045 2100626 -1 - 420 Mu-like phage C protein, possible positive regulator of late transcription - none -
fig|6666666.229904.peg.2107 CDS CP001733.2 2101503 2101042 -3 - 462 hypothetical protein - none -
fig|6666666.229904.peg.2108 CDS CP001733.2 2102023 2101481 -1 - 543 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229904.peg.2109 CDS CP001733.2 2103069 2102620 -3 - 450 hypothetical protein - none -
fig|6666666.229904.peg.2110 CDS CP001733.2 2103106 2103219 1 + 114 hypothetical protein - none -
fig|6666666.229904.peg.2111 CDS CP001733.2 2104038 2103778 -3 - 261 hypothetical protein - none -
fig|6666666.229904.peg.2112 CDS CP001733.2 2104587 2104042 -3 - 546 hypothetical protein - none -
fig|6666666.229904.peg.2113 CDS CP001733.2 2104769 2104584 -2 - 186 hypothetical protein - none -
fig|6666666.229904.peg.2114 CDS CP001733.2 2104933 2104766 -1 - 168 hypothetical protein - none -
fig|6666666.229904.peg.2115 CDS CP001733.2 2105286 2105077 -3 - 210 hypothetical protein - none -
fig|6666666.229904.peg.2116 CDS CP001733.2 2105492 2105289 -2 - 204 hypothetical protein - none -
fig|6666666.229904.peg.2117 CDS CP001733.2 2105706 2105503 -3 - 204 Phage protein - none -
fig|6666666.229904.peg.2118 CDS GQ866233.1 565 248 -1 - 318 Phage tail fibers Phage tail fiber proteins
fig|6666666.229904.peg.2119 CDS GQ866233.1 1074 709 -3 - 366 Phage tail fiber assembly protein Phage tail fiber proteins
fig|6666666.229904.peg.2120 CDS GQ866233.1 2564 1080 -2 - 1485 Phage tail fibers Phage tail fiber proteins
fig|6666666.229904.peg.2121 CDS GQ866233.1 3150 2575 -3 - 576 FIG00696337: hypothetical protein - none -
fig|6666666.229904.peg.2122 CDS GQ866233.1 4292 3150 -2 - 1143 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229904.peg.2123 CDS GQ866233.1 4682 4323 -2 - 360 phage-related protein - none -
fig|6666666.229904.peg.2124 CDS GQ866233.1 5323 4679 -1 - 645 Phage baseplate Phage baseplate proteins
fig|6666666.229904.peg.2125 CDS GQ866233.1 6120 5320 -3 - 801 FIG00643583: hypothetical protein - none -
fig|6666666.229904.peg.2126 CDS GQ866233.1 6659 6462 -2 - 198 Phage protein - none -
fig|6666666.229904.peg.2127 CDS GQ866233.1 7554 6787 -3 - 768 FIG01218156: hypothetical protein - none -
fig|6666666.229904.peg.2128 CDS GQ866233.1 9642 7558 -3 - 2085 Phage tape measure protein Phage tail proteins
fig|6666666.229904.peg.2129 CDS GQ866233.1 10212 9793 -3 - 420 hypothetical protein - none -
fig|6666666.229904.peg.2130 CDS GQ866233.1 10643 10212 -2 - 432 FIG01217275: hypothetical protein - none -
fig|6666666.229904.peg.2131 CDS GQ866233.1 12201 10693 -3 - 1509 Phage-related protein - none -
fig|6666666.229904.peg.2132 CDS GQ866233.1 12499 12206 -1 - 294 Phage protein - none -
fig|6666666.229904.peg.2133 CDS GQ866233.1 13004 12633 -2 - 372 hypothetical protein - none -
fig|6666666.229904.peg.2134 CDS GQ866233.1 13447 13001 -1 - 447 Phage-related protein - none -
fig|6666666.229904.peg.2135 CDS GQ866233.1 13807 13448 -1 - 360 hypothetical protein - none -
fig|6666666.229904.peg.2136 CDS GQ866233.1 14732 13818 -2 - 915 hypothetical protein - none -
fig|6666666.229904.peg.2137 CDS GQ866233.1 15193 14744 -1 - 450 Phage protein - none -
fig|6666666.229904.peg.2138 CDS GQ866233.1 16319 15207 -2 - 1113 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229904.peg.2139 CDS GQ866233.1 16777 16379 -1 - 399 Guanosine-3@1,5@1-bis(Diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) - none -
fig|6666666.229904.peg.2140 CDS GQ866233.1 19355 17019 -2 - 2337 Phage minor capsid protein Phage capsid proteins
fig|6666666.229904.peg.2141 CDS GQ866233.1 20655 19321 -3 - 1335 Phage protein - none -
fig|6666666.229904.peg.2142 CDS GQ866233.1 22039 20657 -1 - 1383 Phage terminase, large subunit Phage packaging machinery
fig|6666666.229904.peg.2143 CDS GQ866233.1 22367 22065 -2 - 303 Phage terminase, small subunit Phage packaging machinery
fig|6666666.229904.peg.2144 CDS GQ866233.1 23048 22782 -2 - 267 Phage protein - none -
fig|6666666.229904.peg.2145 CDS GQ866233.1 23577 23245 -3 - 333 hypothetical protein - none -
fig|6666666.229904.peg.2146 CDS GQ866233.1 24161 23580 -2 - 582 Lytic enzyme - none -
fig|6666666.229904.peg.2147 CDS GQ866233.1 24704 24504 -2 - 201 Phage protein - none -
fig|6666666.229904.peg.2148 CDS GQ866233.1 26383 25514 -1 - 870 Phage tail fibers Phage tail fiber proteins
fig|6666666.229904.peg.2149 CDS GQ866233.1 26861 26667 -2 - 195 anti-termination protein - none -
fig|6666666.229904.peg.2150 CDS GQ866233.1 27493 27038 -1 - 456 NinG recombination protein - none -
fig|6666666.229904.peg.2151 CDS GQ866233.1 27801 27598 -3 - 204 Phage protein - none -
fig|6666666.229904.peg.2152 CDS GQ866233.1 27967 27788 -1 - 180 Phage protein - none -
fig|6666666.229904.peg.2153 CDS GQ866233.1 28185 27967 -3 - 219 Phage protein - none -
fig|6666666.229904.peg.2154 CDS GQ866233.1 28616 28191 -2 - 426 Phage NinB DNA recombination - none -
fig|6666666.229904.peg.2155 CDS GQ866233.1 29195 28695 -2 - 501 DNA adenine methyltransferase, phage-associated Phage DNA synthesis
fig|6666666.229904.peg.2156 CDS GQ866233.1 29866 29192 -1 - 675 Replication protein P - none -
fig|6666666.229904.peg.2157 CDS GQ866233.1 30585 29863 -3 - 723 Primosomal protein I - none -
fig|6666666.229904.peg.2158 CDS GQ866233.1 31289 30582 -2 - 708 Putative DNA-binding protein Roi of bacteriophage BP-933W - none -
fig|6666666.229904.peg.2159 CDS GQ866233.1 31458 31342 -3 - 117 hypothetical protein - none -
fig|6666666.229904.peg.2160 CDS GQ866233.1 31777 31538 -1 - 240 hypothetical protein - none -
fig|6666666.229904.peg.2161 CDS GQ866233.1 31908 32567 3 + 660 Phage repressor - none -
fig|6666666.229904.peg.2162 CDS GQ866233.1 32592 34289 3 + 1698 Possible abortive infection phage resistance protein - none -
fig|6666666.229904.peg.2163 CDS GQ866233.1 35586 35789 3 + 204 FIG00698500: hypothetical protein - none -
fig|6666666.229904.peg.2164 CDS GQ866233.1 36265 36705 1 + 441 GepA protein - none -
fig|6666666.229904.peg.2165 CDS GQ866233.1 37748 38401 2 + 654 Phage tail fibers Phage tail fiber proteins
fig|6666666.229904.peg.2166 CDS GQ866233.1 38488 38763 1 + 276 Phage protein - none -
fig|6666666.229904.peg.2167 CDS GQ866233.1 38768 39007 2 + 240 Phage protein - none -
fig|6666666.229904.peg.2168 CDS GQ866233.1 39010 39309 1 + 300 Phage protein - none -
fig|6666666.229904.peg.2169 CDS GQ866233.1 39321 40214 3 + 894 hypothetical protein - none -
fig|6666666.229904.peg.2170 CDS GQ866233.1 40211 40834 2 + 624 hypothetical protein - none -
fig|6666666.229904.peg.2171 CDS GQ866233.1 40878 41009 3 + 132 Phage protein - none -
fig|6666666.229904.peg.2172 CDS GQ866233.1 41594 42250 2 + 657 Phage protein - none -
fig|6666666.229904.peg.2173 CDS GQ866233.1 42856 43902 1 + 1047 Phage integrase - none -
fig|6666666.229904.peg.2174 CDS GQ866234.1 1154 1029 -2 - 126 hypothetical protein - none -
fig|6666666.229904.peg.2175 CDS GQ866234.1 1554 2531 3 + 978 Beta-galactosidase 3 Galactosylceramide and Sulfatide metabolism
fig|6666666.229904.peg.2176 CDS GQ866234.1 2714 2902 2 + 189 hypothetical protein - none -
fig|6666666.229904.peg.2177 CDS GQ866234.1 2902 3564 1 + 663 Peptidoglycan hydrolase VirB1, involved in T-DNA transfer - none -
fig|6666666.229904.peg.2178 CDS GQ866234.1 3577 3909 1 + 333 L-fucose isomerase related protein - none -
fig|6666666.229904.peg.2179 CDS GQ866234.1 4049 6832 2 + 2784 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229904.peg.2180 CDS GQ866234.1 6918 7649 3 + 732 Minor pilin of type IV secretion complex, VirB5 - none -
fig|6666666.229904.peg.2181 CDS GQ866234.1 7659 7850 3 + 192 hypothetical protein - none -
fig|6666666.229904.peg.2182 CDS GQ866234.1 7869 8795 3 + 927 conserved hypothetical protein - phage associated - none -
fig|6666666.229904.peg.2183 CDS GQ866234.1 8991 9698 3 + 708 Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB8 - none -
fig|6666666.229904.peg.2184 CDS GQ866234.1 9710 10597 2 + 888 Outer membrane and periplasm component of type IV secretion of T-DNA complex, has secretin-like domain, VirB9 - none -
fig|6666666.229904.peg.2185 CDS GQ866234.1 10608 11792 3 + 1185 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) - none -
fig|6666666.229904.peg.2186 CDS GQ866234.1 11985 11872 -3 - 114 hypothetical protein - none -
fig|6666666.229904.peg.2187 CDS GQ866234.1 12187 12891 1 + 705 ATPase required for both assembly of type IV secretion complex and secretion of T-DNA complex, VirB11 - none -
fig|6666666.229904.peg.2188 CDS GQ866234.1 13333 13713 1 + 381 hypothetical protein - none -
fig|6666666.229904.peg.2189 CDS GQ866234.1 13706 15607 2 + 1902 Type IV secretion system protein VirD4 - none -
fig|6666666.229904.peg.2190 CDS GQ866234.1 15620 16036 2 + 417 hypothetical protein - none -
fig|6666666.229904.peg.2191 CDS GQ866234.1 16048 16371 1 + 324 IncP-type conjugative transfer protein TrbM - none -
fig|6666666.229904.peg.2192 CDS GQ866234.1 16380 16949 3 + 570 IncQ plasmid conjugative transfer protein TraQ (RP4 TrbM homolog) Conjugative transfer
fig|6666666.229904.peg.2193 CDS GQ866234.1 17274 17417 3 + 144 hypothetical protein - none -
fig|6666666.229904.peg.2194 CDS GQ866234.1 18288 18578 3 + 291 hypothetical protein - none -
fig|6666666.229904.peg.2195 CDS GQ866234.1 18688 18927 1 + 240 hypothetical protein - none -
fig|6666666.229904.peg.2196 CDS GQ866234.1 18937 21219 1 + 2283 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229904.peg.2197 CDS GQ866234.1 21239 21550 2 + 312 hypothetical protein - none -
fig|6666666.229904.peg.2198 CDS GQ866234.1 21778 22182 1 + 405 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229904.peg.2199 CDS GQ866234.1 22465 22229 -1 - 237 hypothetical protein - none -
fig|6666666.229904.peg.2200 CDS GQ866234.1 22906 23523 1 + 618 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229904.peg.2201 CDS GQ866234.1 23565 23738 3 + 174 hypothetical protein - none -
fig|6666666.229904.peg.2202 CDS GQ866234.1 23832 23957 3 + 126 hypothetical protein - none -
fig|6666666.229904.peg.2203 CDS GQ866234.1 25020 23959 -3 - 1062 IncQ plasmid conjugative transfer DNA nicking endonuclease TraR (pTi VirD2 homolog) Conjugative transfer
fig|6666666.229904.peg.2204 CDS GQ866234.1 25746 25246 -3 - 501 hypothetical protein - none -
fig|6666666.229904.peg.2205 CDS GQ866234.1 25917 26159 3 + 243 hypothetical protein - none -
fig|6666666.229904.peg.2206 CDS GQ866234.1 26170 27489 1 + 1320 hypothetical protein - none -
fig|6666666.229904.peg.2207 CDS GQ866234.1 27514 28977 1 + 1464 hypothetical protein - none -
fig|6666666.229904.peg.2208 CDS GQ866234.1 29041 30354 1 + 1314 hypothetical protein - none -
fig|6666666.229904.peg.2209 CDS GQ866234.1 30474 30926 3 + 453 hypothetical protein - none -
fig|6666666.229904.peg.2210 CDS GQ866235.1 870 583 -3 - 288 hypothetical protein - none -
fig|6666666.229904.peg.2211 CDS GQ866235.1 1472 897 -2 - 576 Bores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1) - none -
fig|6666666.229904.peg.2212 CDS GQ866235.1 1997 1560 -2 - 438 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229904.peg.2213 CDS GQ866235.1 2898 2758 -3 - 141 Amidase - none -
fig|6666666.229904.peg.2214 CDS GQ866235.1 3712 2966 -1 - 747 IncQ plasmid conjugative transfer DNA nicking endonuclease TraR (pTi VirD2 homolog) Conjugative transfer
fig|6666666.229904.peg.2215 CDS GQ866235.1 5049 5333 3 + 285 hypothetical protein - none -
fig|6666666.229904.peg.2216 CDS GQ866235.1 5614 6003 1 + 390 sigma factor - none -
fig|6666666.229904.peg.2217 CDS GQ866235.1 6044 6418 2 + 375 hypothetical protein - none -
fig|6666666.229904.peg.2218 CDS GQ866235.1 6375 7085 3 + 711 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase( EC:1.1.1.- ) - none -
fig|6666666.229904.peg.2219 CDS GQ866235.1 7063 7680 1 + 618 hypothetical protein - none -
fig|6666666.229904.peg.2220 CDS GQ866235.1 8146 8334 1 + 189 hypothetical protein - none -
fig|6666666.229904.peg.2221 CDS GQ866235.1 8327 8443 2 + 117 hypothetical protein - none -
fig|6666666.229904.peg.2222 CDS GQ866235.1 10026 9019 -3 - 1008 putative ATP-dependent RNA helicase - none -
fig|6666666.229904.peg.2223 CDS GQ866235.1 10972 10736 -1 - 237 FIG00699267: hypothetical protein - none -
fig|6666666.229904.peg.2224 CDS GQ866235.1 11357 11082 -2 - 276 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229904.peg.2225 CDS GQ866235.1 11649 11410 -3 - 240 hypothetical protein - none -
fig|6666666.229904.peg.2226 CDS GQ866235.1 12283 11642 -1 - 642 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229904.peg.2227 CDS GQ866235.1 12437 12306 -2 - 132 hypothetical protein - none -
fig|6666666.229904.peg.2228 CDS GQ866235.1 12700 12867 1 + 168 hypothetical protein - none -
fig|6666666.229904.peg.2229 CDS GQ866235.1 12864 13148 3 + 285 hypothetical protein - none -
fig|6666666.229904.peg.2230 CDS GQ866235.1 13488 13225 -3 - 264 IncQ plasmid conjugative transfer protein TraQ (RP4 TrbM homolog) Conjugative transfer
fig|6666666.229904.peg.2231 CDS GQ866235.1 13978 13541 -1 - 438 hypothetical protein - none -
fig|6666666.229904.peg.2232 CDS GQ866235.1 15763 14024 -1 - 1740 Coupling protein VirD4, ATPase required for T-DNA transfer - none -
fig|6666666.229904.peg.2233 CDS GQ866235.1 16794 15763 -3 - 1032 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB11) - none -
fig|6666666.229904.peg.2234 CDS GQ866235.1 17916 16807 -3 - 1110 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) - none -
fig|6666666.229904.peg.2235 CDS GQ866235.1 18783 17926 -3 - 858 Outer membrane and periplasm component of type IV secretion of T-DNA complex, has secretin-like domain, VirB9 - none -
fig|6666666.229904.peg.2236 CDS GQ866235.1 19474 18785 -1 - 690 Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB8 - none -
fig|6666666.229904.peg.2237 CDS GQ866235.1 20688 19687 -3 - 1002 Integral inner membrane protein of type IV secretion complex (VirB6) - none -
fig|6666666.229904.peg.2238 CDS GQ866235.1 20924 20700 -2 - 225 hypothetical protein - none -
fig|6666666.229904.peg.2239 CDS GQ866235.1 21674 20946 -2 - 729 Minor pilin of type IV secretion complex, VirB5 - none -
fig|6666666.229904.peg.2240 CDS GQ866235.1 23856 21685 -3 - 2172 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229904.rna.1 RNA CP001733.2 89525 89407 -2 - 119 5S RNA - none -
fig|6666666.229904.rna.2 RNA CP001733.2 92836 89799 -1 - 3038 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229904.rna.3 RNA CP001733.2 93191 93119 -2 - 73 tRNA-Ala-TGC - none -
fig|6666666.229904.rna.4 RNA CP001733.2 93317 93244 -2 - 74 tRNA-Ile-GAT - none -
fig|6666666.229904.rna.5 RNA CP001733.2 94940 93401 -2 - 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229904.rna.6 RNA CP001733.2 170752 170679 -1 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.229904.rna.7 RNA CP001733.2 170883 170810 -3 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.229904.rna.8 RNA CP001733.2 170994 170904 -3 - 91 tRNA-Ser-GCT - none -
fig|6666666.229904.rna.9 RNA CP001733.2 238562 238444 -2 - 119 5S RNA - none -
fig|6666666.229904.rna.10 RNA CP001733.2 241878 238836 -3 - 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229904.rna.11 RNA CP001733.2 242233 242161 -1 - 73 tRNA-Ala-TGC - none -
fig|6666666.229904.rna.12 RNA CP001733.2 242359 242286 -1 - 74 tRNA-Ile-GAT - none -
fig|6666666.229904.rna.13 RNA CP001733.2 243982 242443 -1 - 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229904.rna.14 RNA CP001733.2 322556 322646 2 + 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229904.rna.15 RNA CP001733.2 524604 526143 3 + 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229904.rna.16 RNA CP001733.2 526240 526312 1 + 73 tRNA-Glu-TTC - none -
fig|6666666.229904.rna.17 RNA CP001733.2 526522 529564 1 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229904.rna.18 RNA CP001733.2 529838 529956 2 + 119 5S RNA - none -
fig|6666666.229904.rna.19 RNA CP001733.2 541020 541093 3 + 74 tRNA-Pro-TGG - none -
fig|6666666.229904.rna.20 RNA CP001733.2 541130 541203 2 + 74 tRNA-Arg-TCT - none -
fig|6666666.229904.rna.21 RNA CP001733.2 562904 562976 2 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.229904.rna.22 RNA CP001733.2 562984 563056 1 + 73 tRNA-Asn-GTT - none -
fig|6666666.229904.rna.23 RNA CP001733.2 646304 646232 -2 - 73 tRNA-Thr-GGT - none -
fig|6666666.229904.rna.24 RNA CP001733.2 646382 646311 -2 - 72 tRNA-Gly-TCC - none -
fig|6666666.229904.rna.25 RNA CP001733.2 646507 646426 -1 - 82 tRNA-Tyr-GTA - none -
fig|6666666.229904.rna.26 RNA CP001733.2 646613 646541 -2 - 73 tRNA-Thr-TGT - none -
fig|6666666.229904.rna.27 RNA CP001733.2 675580 675507 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.229904.rna.28 RNA CP001733.2 747644 747726 2 + 83 tRNA-Leu-GAG tRNAs
fig|6666666.229904.rna.29 RNA CP001733.2 777387 777470 3 + 84 tRNA-Leu-CAG tRNAs
fig|6666666.229904.rna.30 RNA CP001733.2 834199 834127 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.229904.rna.31 RNA CP001733.2 834338 834255 -2 - 84 tRNA-Leu-TAA - none -
fig|6666666.229904.rna.32 RNA CP001733.2 834415 834343 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229904.rna.33 RNA CP001733.2 862112 863651 2 + 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229904.rna.34 RNA CP001733.2 863748 863820 3 + 73 tRNA-Glu-TTC - none -
fig|6666666.229904.rna.35 RNA CP001733.2 864030 867072 3 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229904.rna.36 RNA CP001733.2 867346 867464 1 + 119 5S RNA - none -
fig|6666666.229904.rna.37 RNA CP001733.2 889660 889588 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229904.rna.38 RNA CP001733.2 1088533 1088606 1 + 74 tRNA-Met-CAT - none -
fig|6666666.229904.rna.39 RNA CP001733.2 1088615 1088696 2 + 82 tRNA-Leu-TAG - none -
fig|6666666.229904.rna.40 RNA CP001733.2 1088729 1088800 2 + 72 tRNA-Gln-TTG - none -
fig|6666666.229904.rna.41 RNA CP001733.2 1088841 1088912 3 + 72 tRNA-Gln-TTG - none -
fig|6666666.229904.rna.42 RNA CP001733.2 1111733 1111806 2 + 74 tRNA-Met-CAT - none -
fig|6666666.229904.rna.43 RNA CP001733.2 1354914 1354841 -3 - 74 tRNA-Val-GAC tRNAs
fig|6666666.229904.rna.44 RNA CP001733.2 1377486 1377368 -3 - 119 5S RNA - none -
fig|6666666.229904.rna.45 RNA CP001733.2 1380796 1377754 -1 - 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229904.rna.46 RNA CP001733.2 1381151 1381079 -2 - 73 tRNA-Ala-TGC - none -
fig|6666666.229904.rna.47 RNA CP001733.2 1381277 1381204 -2 - 74 tRNA-Ile-GAT - none -
fig|6666666.229904.rna.48 RNA CP001733.2 1382900 1381361 -2 - 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229904.rna.49 RNA CP001733.2 1445389 1445475 1 + 87 tRNA-Ser-GGA tRNAs
fig|6666666.229904.rna.50 RNA CP001733.2 1463350 1463278 -1 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.229904.rna.51 RNA CP001733.2 1463461 1463388 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.229904.rna.52 RNA CP001733.2 1463752 1463634 -1 - 119 5S RNA - none -
fig|6666666.229904.rna.53 RNA CP001733.2 1467059 1464020 -2 - 3040 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229904.rna.54 RNA CP001733.2 1467341 1467269 -2 - 73 tRNA-Glu-TTC - none -
fig|6666666.229904.rna.55 RNA CP001733.2 1468977 1467438 -3 - 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229904.rna.56 RNA CP001733.2 1469238 1469165 -3 - 74 tRNA-Pro-TGG - none -
fig|6666666.229904.rna.57 RNA CP001733.2 1469316 1469244 -3 - 73 tRNA-His-GTG - none -
fig|6666666.229904.rna.58 RNA CP001733.2 1469424 1469351 -3 - 74 tRNA-Arg-CCG tRNAs
fig|6666666.229904.rna.59 RNA CP001733.2 1519228 1519300 1 + 73 tRNA-Asn-GTT - none -
fig|6666666.229904.rna.60 RNA CP001733.2 1593074 1593156 2 + 83 tRNA-Leu-CAA tRNAs
fig|6666666.229904.rna.61 RNA CP001733.2 1730595 1730668 3 + 74 tRNA-Asp-GTC - none -
fig|6666666.229904.rna.62 RNA CP001733.2 1730694 1730767 3 + 74 tRNA-Asp-GTC - none -
fig|6666666.229904.rna.63 RNA CP001733.2 1772550 1772477 -3 - 74 tRNA-Lys-CTT - none -
fig|6666666.229904.rna.64 RNA CP001733.2 1772651 1772579 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.229904.rna.65 RNA CP001733.2 1772753 1772681 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.229904.rna.66 RNA CP001733.2 1826216 1826130 -2 - 87 tRNA-Ser-TGA - none -
fig|6666666.229904.rna.67 RNA CP001733.2 1833571 1833643 1 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229904.rna.68 RNA CP001733.2 1833655 1833725 1 + 71 tRNA-Cys-GCA tRNAs
fig|6666666.229904.rna.69 RNA CP001733.2 1842343 1842270 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.229904.rna.70 RNA CP001733.2 2024931 2024859 -3 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.229904.rna.71 RNA CP001733.2 2026741 2026813 1 + 73 tRNA-Val-TAC - none -
fig|6666666.229904.rna.72 RNA CP001733.2 2026855 2026927 1 + 73 tRNA-Val-TAC - none -
fig|6666666.229904.rna.73 RNA CP001733.2 2026958 2027030 2 + 73 tRNA-Val-TAC - none -
fig|6666666.229904.rna.74 RNA GQ866233.1 35391 35478 3 + 88 tRNA-Leu-AAG - none -