fig|6666666.229905.peg.1 CDS ADOB02000001.1 11 439 2 + 429 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229905.peg.2 CDS ADOB02000001.1 546 394 -3 - 153 hypothetical protein - none -
fig|6666666.229905.peg.3 CDS ADOB02000001.1 563 1030 2 + 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229905.peg.4 CDS ADOB02000001.1 1073 2419 2 + 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229905.peg.5 CDS ADOB02000001.1 2528 2662 2 + 135 hypothetical protein - none -
fig|6666666.229905.peg.6 CDS ADOB02000001.1 3599 4987 2 + 1389 FOG: TPR repeat - none -
fig|6666666.229905.peg.7 CDS ADOB02000001.1 5011 5283 1 + 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229905.peg.8 CDS ADOB02000001.1 5280 6716 3 + 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229905.peg.9 CDS ADOB02000001.1 6735 7277 3 + 543 Protein involved in cell division - none -
fig|6666666.229905.peg.10 CDS ADOB02000001.1 7290 8174 3 + 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229905.peg.11 CDS ADOB02000001.1 8419 9468 1 + 1050 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229905.peg.12 CDS ADOB02000001.1 9462 9761 3 + 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229905.peg.13 CDS ADOB02000001.1 10625 10377 -2 - 249 unknown - none -
fig|6666666.229905.peg.14 CDS ADOB02000001.1 11403 11080 -3 - 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229905.peg.15 CDS ADOB02000001.1 13005 11632 -3 - 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229905.peg.16 CDS ADOB02000001.1 13674 13402 -3 - 273 FIG00904058: hypothetical protein - none -
fig|6666666.229905.peg.17 CDS ADOB02000001.1 13886 13674 -2 - 213 FIG003276: zinc-binding protein - none -
fig|6666666.229905.peg.18 CDS ADOB02000001.1 14499 13876 -3 - 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229905.peg.19 CDS ADOB02000001.1 15238 14549 -1 - 690 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229905.peg.20 CDS ADOB02000001.1 16458 15235 -3 - 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229905.peg.21 CDS ADOB02000001.1 17860 16451 -1 - 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229905.peg.22 CDS ADOB02000001.1 18339 17887 -3 - 453 Type IV pilin PilA Type IV pilus
fig|6666666.229905.peg.23 CDS ADOB02000001.1 18362 19015 2 + 654 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229905.peg.24 CDS ADOB02000001.1 19959 19489 -3 - 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229905.peg.25 CDS ADOB02000001.1 20124 22382 3 + 2259 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229905.peg.26 CDS ADOB02000001.1 22467 23369 3 + 903 Lipoprotein nlpI precursor - none -
fig|6666666.229905.peg.27 CDS ADOB02000001.1 23496 25283 3 + 1788 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229905.peg.28 CDS ADOB02000001.1 26062 25367 -1 - 696 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229905.peg.29 CDS ADOB02000001.1 26283 27386 3 + 1104 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229905.peg.30 CDS ADOB02000001.1 27518 28792 2 + 1275 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229905.peg.31 CDS ADOB02000001.1 28789 29928 1 + 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229905.peg.32 CDS ADOB02000001.1 30537 29998 -3 - 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229905.peg.33 CDS ADOB02000001.1 32137 30776 -1 - 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229905.peg.34 CDS ADOB02000001.1 32258 32791 2 + 534 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229905.peg.35 CDS ADOB02000001.1 33730 32765 -1 - 966 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229905.peg.36 CDS ADOB02000001.1 33899 33735 -2 - 165 hypothetical protein - none -
fig|6666666.229905.peg.37 CDS ADOB02000001.1 34420 33920 -1 - 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229905.peg.38 CDS ADOB02000001.1 35391 34471 -3 - 921 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229905.peg.39 CDS ADOB02000001.1 35504 36340 2 + 837 COG1720: Uncharacterized conserved protein tRNA modification Bacteria
fig|6666666.229905.peg.40 CDS ADOB02000001.1 36889 36668 -1 - 222 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229905.peg.41 CDS ADOB02000001.1 37985 36903 -2 - 1083 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229905.peg.42 CDS ADOB02000001.1 38642 38256 -2 - 387 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229905.peg.43 CDS ADOB02000001.1 38737 38949 1 + 213 Copper chaperone Copper homeostasis
fig|6666666.229905.peg.44 CDS ADOB02000001.1 39036 41195 3 + 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229905.peg.45 CDS ADOB02000001.1 41268 42113 3 + 846 membrane protein, putative - none -
fig|6666666.229905.peg.46 CDS ADOB02000001.1 42443 42580 2 + 138 Phage-related protein - none -
fig|6666666.229905.peg.47 CDS ADOB02000001.1 42573 42896 3 + 324 FIG074102: hypothetical protein - none -
fig|6666666.229905.peg.48 CDS ADOB02000001.1 44200 42959 -1 - 1242 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229905.peg.49 CDS ADOB02000001.1 44776 44210 -1 - 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229905.peg.50 CDS ADOB02000001.1 46634 45033 -2 - 1602 Dca - none -
fig|6666666.229905.peg.51 CDS ADOB02000001.1 46738 46869 1 + 132 hypothetical protein - none -
fig|6666666.229905.peg.52 CDS ADOB02000001.1 46866 49139 3 + 2274 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229905.peg.53 CDS ADOB02000001.1 49272 51119 3 + 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229905.peg.54 CDS ADOB02000001.1 51254 51880 2 + 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229905.peg.55 CDS ADOB02000001.1 52004 53257 2 + 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229905.peg.56 CDS ADOB02000001.1 53391 53254 -3 - 138 hypothetical protein - none -
fig|6666666.229905.peg.57 CDS ADOB02000001.1 53377 54081 1 + 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229905.peg.58 CDS ADOB02000001.1 54539 54087 -2 - 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229905.peg.59 CDS ADOB02000001.1 55206 54592 -3 - 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229905.peg.60 CDS ADOB02000001.1 56494 55217 -1 - 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229905.peg.61 CDS ADOB02000001.1 57619 56516 -1 - 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229905.peg.62 CDS ADOB02000001.1 58686 57631 -3 - 1056 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229905.peg.63 CDS ADOB02000001.1 59381 58830 -2 - 552 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229905.peg.64 CDS ADOB02000001.1 60542 59403 -2 - 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229905.peg.65 CDS ADOB02000001.1 60837 61886 3 + 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229905.peg.66 CDS ADOB02000001.1 63431 62067 -2 - 1365 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229905.peg.67 CDS ADOB02000001.1 64765 63524 -1 - 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229905.peg.68 CDS ADOB02000001.1 65422 64922 -1 - 501 Protein sprT - none -
fig|6666666.229905.peg.69 CDS ADOB02000001.1 66645 65491 -3 - 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229905.peg.70 CDS ADOB02000001.1 67122 66853 -3 - 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229905.peg.71 CDS ADOB02000001.1 67967 67218 -2 - 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229905.peg.72 CDS ADOB02000001.1 69726 68020 -3 - 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229905.peg.73 CDS ADOB02000001.1 71021 69717 -2 - 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229905.peg.74 CDS ADOB02000001.1 71138 72352 2 + 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229905.peg.75 CDS ADOB02000001.1 73204 72473 -1 - 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229905.peg.76 CDS ADOB02000001.1 73399 74943 1 + 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229905.peg.77 CDS ADOB02000001.1 74967 75506 3 + 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229905.peg.78 CDS ADOB02000001.1 75695 75549 -2 - 147 hypothetical protein - none -
fig|6666666.229905.peg.79 CDS ADOB02000001.1 77136 75706 -3 - 1431 Transglycosylase, Slt family - none -
fig|6666666.229905.peg.80 CDS ADOB02000001.1 77510 77157 -2 - 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229905.peg.81 CDS ADOB02000001.1 77607 78203 3 + 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.82 CDS ADOB02000001.1 78736 78293 -1 - 444 FIG00904084: hypothetical protein - none -
fig|6666666.229905.peg.83 CDS ADOB02000001.1 78876 79703 3 + 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229905.peg.84 CDS ADOB02000001.1 80696 79905 -2 - 792 putative lipoprotein - none -
fig|6666666.229905.peg.85 CDS ADOB02000001.1 81751 81107 -1 - 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229905.peg.86 CDS ADOB02000001.1 84160 81896 -1 - 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229905.peg.87 CDS ADOB02000001.1 84335 84153 -2 - 183 hypothetical protein - none -
fig|6666666.229905.peg.88 CDS ADOB02000001.1 84377 85078 2 + 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229905.peg.89 CDS ADOB02000001.1 85083 85493 3 + 411 Bicyclomycin resistance protein - none -
fig|6666666.229905.peg.90 CDS ADOB02000001.1 85490 86275 2 + 786 Bicyclomycin resistance protein - none -
fig|6666666.229905.peg.91 CDS ADOB02000001.1 86447 87082 2 + 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229905.peg.92 CDS ADOB02000001.1 87087 87752 3 + 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229905.peg.93 CDS ADOB02000001.1 87763 88500 1 + 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229905.peg.94 CDS ADOB02000001.1 88518 88724 3 + 207 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229905.peg.95 CDS ADOB02000001.1 88721 89239 2 + 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229905.peg.96 CDS ADOB02000001.1 89239 91197 1 + 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229905.peg.97 CDS ADOB02000001.1 91226 91771 2 + 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229905.peg.98 CDS ADOB02000001.1 91870 92322 1 + 453 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229905.peg.99 CDS ADOB02000001.1 92322 93245 3 + 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229905.peg.100 CDS ADOB02000001.1 93380 94003 2 + 624 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229905.peg.101 CDS ADOB02000001.1 94021 94311 1 + 291 hypothetical protein - none -
fig|6666666.229905.peg.102 CDS ADOB02000001.1 94888 96411 1 + 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229905.peg.103 CDS ADOB02000001.1 96485 97150 2 + 666 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229905.peg.104 CDS ADOB02000001.1 97147 97824 1 + 678 NrfC protein - none -
fig|6666666.229905.peg.105 CDS ADOB02000001.1 97821 98786 3 + 966 NrfD protein - none -
fig|6666666.229905.peg.106 CDS ADOB02000001.1 99351 98983 -3 - 369 hypothetical protein - none -
fig|6666666.229905.peg.107 CDS ADOB02000001.1 99373 101283 1 + 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229905.peg.108 CDS ADOB02000001.1 101276 101806 2 + 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229905.peg.109 CDS ADOB02000001.1 101803 102852 1 + 1050 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229905.peg.110 CDS ADOB02000001.1 102849 104048 3 + 1200 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229905.peg.111 CDS ADOB02000001.1 105905 104268 -2 - 1638 NAD-dependent malic enzyme (EC 1.1.1.38) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229905.peg.112 CDS ADOB02000001.1 106056 106307 3 + 252 Transcriptional regulator, XRE family - none -
fig|6666666.229905.peg.113 CDS ADOB02000002.1 1921 449 -1 - 1473 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229905.peg.114 CDS ADOB02000002.1 3289 1970 -1 - 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229905.peg.115 CDS ADOB02000002.1 3547 4545 1 + 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229905.peg.116 CDS ADOB02000002.1 4605 6116 3 + 1512 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229905.peg.117 CDS ADOB02000002.1 6120 7187 3 + 1068 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229905.peg.118 CDS ADOB02000002.1 7197 8393 3 + 1197 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229905.peg.119 CDS ADOB02000002.1 8446 8775 1 + 330 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229905.peg.120 CDS ADOB02000002.1 8806 9789 1 + 984 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229905.peg.121 CDS ADOB02000002.1 9915 9793 -3 - 123 hypothetical protein - none -
fig|6666666.229905.peg.122 CDS ADOB02000002.1 9904 11076 1 + 1173 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229905.peg.123 CDS ADOB02000002.1 12560 11103 -2 - 1458 Permeases of the major facilitator superfamily - none -
fig|6666666.229905.peg.124 CDS ADOB02000002.1 12697 12581 -1 - 117 hypothetical protein - none -
fig|6666666.229905.peg.125 CDS ADOB02000002.1 12846 13844 3 + 999 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229905.peg.126 CDS ADOB02000002.1 13856 14659 2 + 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229905.peg.127 CDS ADOB02000002.1 14675 15511 2 + 837 PTS system, mannose-specific IID component - none -
fig|6666666.229905.peg.128 CDS ADOB02000002.1 17296 15692 -1 - 1605 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229905.peg.129 CDS ADOB02000002.1 17591 17397 -2 - 195 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229905.peg.130 CDS ADOB02000002.1 18525 17572 -3 - 954 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229905.peg.131 CDS ADOB02000002.1 19723 18734 -1 - 990 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229905.peg.132 CDS ADOB02000002.1 19894 19772 -1 - 123 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229905.peg.133 CDS ADOB02000002.1 20553 19876 -3 - 678 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229905.peg.134 CDS ADOB02000002.1 22759 20618 -1 - 2142 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229905.peg.135 CDS ADOB02000002.1 23060 22908 -2 - 153 hypothetical protein - none -
fig|6666666.229905.peg.136 CDS ADOB02000002.1 23065 24111 1 + 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229905.peg.137 CDS ADOB02000002.1 24600 24172 -3 - 429 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.229905.peg.138 CDS ADOB02000002.1 26015 24642 -2 - 1374 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229905.peg.139 CDS ADOB02000002.1 26901 26032 -3 - 870 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229905.peg.140 CDS ADOB02000002.1 28458 26917 -3 - 1542 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229905.peg.141 CDS ADOB02000002.1 29019 28471 -3 - 549 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229905.peg.142 CDS ADOB02000002.1 29503 29033 -1 - 471 ATP synthase F0 sector subunit b - none -
fig|6666666.229905.peg.143 CDS ADOB02000002.1 29807 29553 -2 - 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) - none -
fig|6666666.229905.peg.144 CDS ADOB02000002.1 30649 29861 -1 - 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229905.peg.145 CDS ADOB02000002.1 31051 30674 -1 - 378 FIG048548: ATP synthase protein I2 - none -
fig|6666666.229905.peg.146 CDS ADOB02000002.1 31846 31163 -1 - 684 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229905.peg.147 CDS ADOB02000002.1 32201 31839 -2 - 363 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229905.peg.148 CDS ADOB02000002.1 32452 33210 1 + 759 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229905.peg.149 CDS ADOB02000002.1 35371 33482 -1 - 1890 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229905.peg.150 CDS ADOB02000002.1 36257 35814 -2 - 444 Flavoprotein MioC Flavodoxin
fig|6666666.229905.peg.151 CDS ADOB02000002.1 36532 36314 -1 - 219 FIG074102: hypothetical protein - none -
fig|6666666.229905.peg.152 CDS ADOB02000002.1 36728 37741 2 + 1014 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229905.peg.153 CDS ADOB02000002.1 38183 37779 -2 - 405 hypothetical protein - none -
fig|6666666.229905.peg.154 CDS ADOB02000002.1 38204 38335 2 + 132 hypothetical protein - none -
fig|6666666.229905.peg.155 CDS ADOB02000002.1 39180 38383 -3 - 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229905.peg.156 CDS ADOB02000002.1 40196 39183 -2 - 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.157 CDS ADOB02000002.1 40787 40275 -2 - 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229905.peg.158 CDS ADOB02000002.1 41225 40803 -2 - 423 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229905.peg.159 CDS ADOB02000002.1 41570 42892 2 + 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229905.peg.160 CDS ADOB02000002.1 43061 44809 2 + 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229905.peg.161 CDS ADOB02000002.1 44826 46460 3 + 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229905.peg.162 CDS ADOB02000002.1 47192 46572 -2 - 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229905.peg.163 CDS ADOB02000002.1 48103 47204 -1 - 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229905.peg.164 CDS ADOB02000002.1 48262 48990 1 + 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229905.peg.165 CDS ADOB02000002.1 49266 49051 -3 - 216 Protein SlyX - none -
fig|6666666.229905.peg.166 CDS ADOB02000002.1 49361 50086 2 + 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229905.peg.167 CDS ADOB02000002.1 50166 50834 3 + 669 YheO-like PAS domain - none -
fig|6666666.229905.peg.168 CDS ADOB02000002.1 50838 51215 3 + 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229905.peg.169 CDS ADOB02000002.1 51212 51574 2 + 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229905.peg.170 CDS ADOB02000002.1 51577 51864 1 + 288 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229905.peg.171 CDS ADOB02000002.1 52636 51869 -1 - 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229905.peg.172 CDS ADOB02000002.1 53368 52646 -1 - 723 ABC-type amino acid transport system, permease component - none -
fig|6666666.229905.peg.173 CDS ADOB02000002.1 54131 53352 -2 - 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229905.peg.174 CDS ADOB02000002.1 55552 54257 -1 - 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229905.peg.175 CDS ADOB02000002.1 57041 55677 -2 - 1365 lipoprotein, putative - none -
fig|6666666.229905.peg.176 CDS ADOB02000002.1 59897 58983 -2 - 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229905.peg.177 CDS ADOB02000002.1 61024 59894 -1 - 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229905.peg.178 CDS ADOB02000002.1 61110 62480 3 + 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229905.peg.179 CDS ADOB02000002.1 63723 62632 -3 - 1092 Putative exported protein precursor - none -
fig|6666666.229905.peg.180 CDS ADOB02000002.1 64610 63861 -2 - 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229905.peg.181 CDS ADOB02000002.1 65309 64638 -2 - 672 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229905.peg.182 CDS ADOB02000002.1 66246 65875 -3 - 372 Mobile element protein - none -
fig|6666666.229905.peg.183 CDS ADOB02000002.1 66657 66466 -3 - 192 Integrase - none -
fig|6666666.229905.peg.184 CDS ADOB02000002.1 66938 67108 2 + 171 hypothetical protein - none -
fig|6666666.229905.peg.185 CDS ADOB02000002.1 67736 67230 -2 - 507 unknown - none -
fig|6666666.229905.peg.186 CDS ADOB02000002.1 67923 67723 -3 - 201 hypothetical protein - none -
fig|6666666.229905.peg.187 CDS ADOB02000002.1 68252 67923 -2 - 330 hypothetical protein - none -
fig|6666666.229905.peg.188 CDS ADOB02000002.1 68556 68245 -3 - 312 hypothetical protein - none -
fig|6666666.229905.peg.189 CDS ADOB02000002.1 68847 68596 -3 - 252 hypothetical protein - none -
fig|6666666.229905.peg.190 CDS ADOB02000002.1 69303 69097 -3 - 207 hypothetical protein - none -
fig|6666666.229905.peg.191 CDS ADOB02000002.1 70131 69628 -3 - 504 hypothetical protein - none -
fig|6666666.229905.peg.192 CDS ADOB02000002.1 70944 70204 -3 - 741 Phage antirepressor protein - none -
fig|6666666.229905.peg.193 CDS ADOB02000002.1 71403 71029 -3 - 375 hypothetical protein - none -
fig|6666666.229905.peg.194 CDS ADOB02000002.1 71648 71412 -2 - 237 FIG00696418: hypothetical protein - none -
fig|6666666.229905.peg.195 CDS ADOB02000002.1 71968 71645 -1 - 324 hypothetical protein - none -
fig|6666666.229905.peg.196 CDS ADOB02000002.1 72593 71982 -2 - 612 Phage Rha protein - none -
fig|6666666.229905.peg.197 CDS ADOB02000002.1 72944 72696 -2 - 249 hypothetical protein - none -
fig|6666666.229905.peg.198 CDS ADOB02000002.1 73164 72955 -3 - 210 possible prophage CP4-57 regulatory protein - none -
fig|6666666.229905.peg.199 CDS ADOB02000002.1 75227 73983 -2 - 1245 Integrase - none -
fig|6666666.229905.peg.200 CDS ADOB02000002.1 76352 76122 -2 - 231 hypothetical protein - none -
fig|6666666.229905.peg.201 CDS ADOB02000002.1 79084 76349 -1 - 2736 Putative uncharacterized protein ydbH - none -
fig|6666666.229905.peg.202 CDS ADOB02000002.1 79807 79190 -1 - 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229905.peg.203 CDS ADOB02000002.1 79888 81813 1 + 1926 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229905.peg.204 CDS ADOB02000002.1 81961 83019 1 + 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229905.peg.205 CDS ADOB02000002.1 83101 83559 1 + 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229905.peg.206 CDS ADOB02000002.1 83636 84025 2 + 390 Endoribonuclease L-PSP - none -
fig|6666666.229905.peg.207 CDS ADOB02000002.1 86208 84097 -3 - 2112 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229905.peg.208 CDS ADOB02000002.1 87180 86227 -3 - 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229905.peg.209 CDS ADOB02000003.1 82 627 1 + 546 FIG00696317: hypothetical protein - none -
fig|6666666.229905.peg.210 CDS ADOB02000003.1 1311 649 -3 - 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229905.peg.211 CDS ADOB02000003.1 1395 1646 3 + 252 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229905.peg.212 CDS ADOB02000003.1 2552 2043 -2 - 510 probable lipoprotein NlpC - none -
fig|6666666.229905.peg.213 CDS ADOB02000003.1 3586 2732 -1 - 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation
fig|6666666.229905.peg.214 CDS ADOB02000003.1 4495 3596 -1 - 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.229905.peg.215 CDS ADOB02000003.1 5617 4535 -1 - 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.229905.peg.216 CDS ADOB02000003.1 6212 5757 -2 - 456 Outer membrane lipoprotein - none -
fig|6666666.229905.peg.217 CDS ADOB02000003.1 6841 6254 -1 - 588 Protein yecM - none -
fig|6666666.229905.peg.218 CDS ADOB02000003.1 6938 8671 2 + 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229905.peg.219 CDS ADOB02000003.1 10464 9031 -3 - 1434 Putative GTP-binding protein YdgA - none -
fig|6666666.229905.peg.220 CDS ADOB02000003.1 10750 12651 1 + 1902 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229905.peg.221 CDS ADOB02000003.1 13088 14215 2 + 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229905.peg.222 CDS ADOB02000003.1 14640 14293 -3 - 348 Programmed cell death toxin ChpB - none -
fig|6666666.229905.peg.223 CDS ADOB02000003.1 14897 14640 -2 - 258 hypothetical protein - none -
fig|6666666.229905.peg.224 CDS ADOB02000003.1 16093 15041 -1 - 1053 Outer membrane protein P2 precursor (OMP P2) - none -
fig|6666666.229905.peg.225 CDS ADOB02000003.1 17497 16307 -1 - 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229905.peg.226 CDS ADOB02000003.1 17752 18309 1 + 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.227 CDS ADOB02000003.1 19033 19194 1 + 162 Protein with ParB-like nuclease domain in PFGI-1-like cluster - none -
fig|6666666.229905.peg.228 CDS ADOB02000003.1 19202 19345 2 + 144 hypothetical protein - none -
fig|6666666.229905.peg.229 CDS ADOB02000003.1 21123 20563 -3 - 561 Cytolethal distending toxin subunit C Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229905.peg.230 CDS ADOB02000003.1 21985 21134 -1 - 852 Cytolethal distending toxin subunit B Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229905.peg.231 CDS ADOB02000003.1 22668 22000 -3 - 669 Cytolethal distending toxin subunit A Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229905.peg.232 CDS ADOB02000003.1 23581 23237 -1 - 345 Programmed cell death toxin MazF - none -
fig|6666666.229905.peg.233 CDS ADOB02000003.1 23838 23584 -3 - 255 hypothetical protein - none -
fig|6666666.229905.peg.234 CDS ADOB02000003.1 24590 24411 -2 - 180 hypothetical protein - none -
fig|6666666.229905.peg.235 CDS ADOB02000003.1 25083 24904 -3 - 180 Haemophilus-specific protein, uncharacterized - none -
fig|6666666.229905.peg.236 CDS ADOB02000003.1 25377 25919 3 + 543 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229905.peg.237 CDS ADOB02000003.1 26614 26288 -1 - 327 Mobile element protein - none -
fig|6666666.229905.peg.238 CDS ADOB02000003.1 27188 26817 -2 - 372 Mobile element protein - none -
fig|6666666.229905.peg.239 CDS ADOB02000003.1 27959 27261 -2 - 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229905.peg.240 CDS ADOB02000003.1 28622 27975 -2 - 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229905.peg.241 CDS ADOB02000003.1 30214 28739 -1 - 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229905.peg.242 CDS ADOB02000003.1 30355 31875 1 + 1521 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229905.peg.243 CDS ADOB02000003.1 31889 32854 2 + 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229905.peg.244 CDS ADOB02000003.1 32942 34240 2 + 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229905.peg.245 CDS ADOB02000003.1 34595 34305 -2 - 291 hypothetical protein - none -
fig|6666666.229905.peg.246 CDS ADOB02000003.1 35601 34618 -3 - 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229905.peg.247 CDS ADOB02000003.1 35889 37421 3 + 1533 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229905.peg.248 CDS ADOB02000003.1 38687 37491 -2 - 1197 Sugar efflux transporter SotB - none -
fig|6666666.229905.peg.249 CDS ADOB02000003.1 39891 38689 -3 - 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229905.peg.250 CDS ADOB02000003.1 40476 39892 -3 - 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229905.peg.251 CDS ADOB02000003.1 41136 40486 -3 - 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229905.peg.252 CDS ADOB02000003.1 41445 42485 3 + 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229905.peg.253 CDS ADOB02000003.1 42938 43690 2 + 753 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229905.peg.254 CDS ADOB02000003.1 43718 45775 2 + 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229905.peg.255 CDS ADOB02000003.1 45791 46837 2 + 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229905.peg.256 CDS ADOB02000003.1 47116 49227 1 + 2112 unknown - none -
fig|6666666.229905.peg.257 CDS ADOB02000003.1 50080 49280 -1 - 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229905.peg.258 CDS ADOB02000003.1 50231 50956 2 + 726 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Bacteria
fig|6666666.229905.peg.259 CDS ADOB02000003.1 51034 51507 1 + 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229905.peg.260 CDS ADOB02000003.1 51561 52775 3 + 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229905.peg.261 CDS ADOB02000003.1 52835 53218 2 + 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229905.peg.262 CDS ADOB02000003.1 53350 53673 1 + 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229905.peg.263 CDS ADOB02000003.1 53685 54206 3 + 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229905.peg.264 CDS ADOB02000003.1 54227 56086 2 + 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229905.peg.265 CDS ADOB02000003.1 56098 56439 1 + 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229905.peg.266 CDS ADOB02000003.1 56439 56633 3 + 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229905.peg.267 CDS ADOB02000003.1 58827 56767 -3 - 2061 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229905.peg.268 CDS ADOB02000003.1 59000 60112 2 + 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229905.peg.269 CDS ADOB02000003.1 60209 60090 -2 - 120 hypothetical protein - none -
fig|6666666.229905.peg.270 CDS ADOB02000003.1 61347 60202 -3 - 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229905.peg.271 CDS ADOB02000003.1 61908 61483 -3 - 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229905.peg.272 CDS ADOB02000003.1 63227 61920 -2 - 1308 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229905.peg.273 CDS ADOB02000003.1 63392 63270 -2 - 123 hypothetical protein - none -
fig|6666666.229905.peg.274 CDS ADOB02000003.1 63447 63665 3 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229905.peg.275 CDS ADOB02000003.1 65272 63728 -1 - 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229905.peg.276 CDS ADOB02000003.1 66561 65665 -3 - 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229905.peg.277 CDS ADOB02000003.1 66641 66769 2 + 129 hypothetical protein - none -
fig|6666666.229905.peg.278 CDS ADOB02000003.1 66807 67814 3 + 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229905.peg.279 CDS ADOB02000003.1 67854 68141 3 + 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229905.peg.280 CDS ADOB02000003.1 68138 69013 2 + 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229905.peg.281 CDS ADOB02000003.1 69028 70530 1 + 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229905.peg.282 CDS ADOB02000003.1 70724 72136 2 + 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229905.peg.283 CDS ADOB02000003.1 72123 73556 3 + 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229905.peg.284 CDS ADOB02000003.1 73835 75334 2 + 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229905.peg.285 CDS ADOB02000003.1 76630 75599 -1 - 1032 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229905.peg.286 CDS ADOB02000003.1 77778 76624 -3 - 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229905.peg.287 CDS ADOB02000003.1 78888 77845 -3 - 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229905.peg.288 CDS ADOB02000003.1 79140 80153 3 + 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229905.peg.289 CDS ADOB02000003.1 80368 81360 1 + 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229905.peg.290 CDS ADOB02000003.1 81435 82973 3 + 1539 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229905.peg.291 CDS ADOB02000003.1 82992 84002 3 + 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229905.peg.292 CDS ADOB02000003.1 85935 84076 -3 - 1860 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229905.peg.293 CDS ADOB02000003.1 85961 86095 2 + 135 hypothetical protein - none -
fig|6666666.229905.peg.294 CDS ADOB02000003.1 87296 86076 -2 - 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229905.peg.295 CDS ADOB02000003.1 87466 89484 1 + 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229905.peg.296 CDS ADOB02000003.1 89674 92745 1 + 3072 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229905.peg.297 CDS ADOB02000003.1 93434 92856 -2 - 579 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229905.peg.298 CDS ADOB02000003.1 93402 93530 3 + 129 hypothetical protein - none -
fig|6666666.229905.peg.299 CDS ADOB02000003.1 93575 94492 2 + 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229905.peg.300 CDS ADOB02000003.1 94566 96242 3 + 1677 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229905.peg.301 CDS ADOB02000003.1 96728 96309 -2 - 420 Outer membrane protein W precursor - none -
fig|6666666.229905.peg.302 CDS ADOB02000003.1 96956 96732 -2 - 225 hypothetical protein - none -
fig|6666666.229905.peg.303 CDS ADOB02000003.1 97228 97986 1 + 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229905.peg.304 CDS ADOB02000003.1 97992 98543 3 + 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229905.peg.305 CDS ADOB02000003.1 98547 99017 3 + 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229905.peg.306 CDS ADOB02000003.1 99020 99316 2 + 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229905.peg.307 CDS ADOB02000003.1 99522 101738 3 + 2217 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229905.peg.308 CDS ADOB02000003.1 101771 102079 2 + 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229905.peg.309 CDS ADOB02000003.1 102057 102830 3 + 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229905.peg.310 CDS ADOB02000003.1 103340 103086 -2 - 255 hypothetical protein - none -
fig|6666666.229905.peg.311 CDS ADOB02000003.1 104226 103921 -3 - 306 hypothetical protein - none -
fig|6666666.229905.peg.312 CDS ADOB02000003.1 104782 104195 -1 - 588 Integrase - none -
fig|6666666.229905.peg.313 CDS ADOB02000003.1 105584 105246 -2 - 339 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.229905.peg.314 CDS ADOB02000003.1 105743 105612 -2 - 132 hypothetical protein - none -
fig|6666666.229905.peg.315 CDS ADOB02000003.1 107694 105757 -3 - 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229905.peg.316 CDS ADOB02000003.1 108328 107726 -1 - 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229905.peg.317 CDS ADOB02000003.1 108856 108413 -1 - 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229905.peg.318 CDS ADOB02000003.1 108927 109997 3 + 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229905.peg.319 CDS ADOB02000003.1 110067 110960 3 + 894 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229905.peg.320 CDS ADOB02000003.1 110960 111949 2 + 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229905.peg.321 CDS ADOB02000003.1 111949 112932 1 + 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229905.peg.322 CDS ADOB02000003.1 112932 113699 3 + 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229905.peg.323 CDS ADOB02000003.1 114736 113765 -1 - 972 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229905.peg.324 CDS ADOB02000003.1 115044 116852 3 + 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229905.peg.325 CDS ADOB02000003.1 116857 117627 1 + 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229905.peg.326 CDS ADOB02000003.1 117639 118031 3 + 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229905.peg.327 CDS ADOB02000003.1 118041 118385 3 + 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229905.peg.328 CDS ADOB02000003.1 120629 118482 -2 - 2148 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229905.peg.329 CDS ADOB02000003.1 120900 121928 3 + 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.330 CDS ADOB02000003.1 123221 122007 -2 - 1215 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.229905.peg.331 CDS ADOB02000003.1 124043 123339 -2 - 705 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229905.peg.332 CDS ADOB02000003.1 124214 124077 -2 - 138 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229905.peg.333 CDS ADOB02000003.1 124398 124862 3 + 465 FIG00710847: hypothetical protein - none -
fig|6666666.229905.peg.334 CDS ADOB02000003.1 124835 125659 2 + 825 FIG00711691: hypothetical protein - none -
fig|6666666.229905.peg.335 CDS ADOB02000003.1 126991 126167 -1 - 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229905.peg.336 CDS ADOB02000003.1 127665 127042 -3 - 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229905.peg.337 CDS ADOB02000003.1 128591 127911 -2 - 681 FIG009095: D,D-carboxypeptidase family protein CBSS-584.1.peg.1352
fig|6666666.229905.peg.338 CDS ADOB02000003.1 129726 128593 -3 - 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229905.peg.339 CDS ADOB02000003.1 130207 129863 -1 - 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352
fig|6666666.229905.peg.340 CDS ADOB02000003.1 132153 130273 -3 - 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229905.peg.341 CDS ADOB02000003.1 132733 132287 -1 - 447 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229905.peg.342 CDS ADOB02000003.1 133448 132714 -2 - 735 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229905.peg.343 CDS ADOB02000003.1 134563 133646 -1 - 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) - none -
fig|6666666.229905.peg.344 CDS ADOB02000003.1 135884 134601 -2 - 1284 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229905.peg.345 CDS ADOB02000003.1 137248 135968 -1 - 1281 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229905.peg.346 CDS ADOB02000003.1 138040 137273 -1 - 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229905.peg.347 CDS ADOB02000003.1 138966 138037 -3 - 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229905.peg.348 CDS ADOB02000003.1 140409 138979 -3 - 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229905.peg.349 CDS ADOB02000003.1 141544 140480 -1 - 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229905.peg.350 CDS ADOB02000003.1 142775 141585 -2 - 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229905.peg.351 CDS ADOB02000003.1 144094 142790 -1 - 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229905.peg.352 CDS ADOB02000003.1 145206 144121 -3 - 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229905.peg.353 CDS ADOB02000003.1 146579 145200 -2 - 1380 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229905.peg.354 CDS ADOB02000003.1 148052 146586 -2 - 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229905.peg.355 CDS ADOB02000003.1 149893 148070 -1 - 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229905.peg.356 CDS ADOB02000003.1 150228 149911 -3 - 318 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229905.peg.357 CDS ADOB02000003.1 151196 150228 -2 - 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229905.peg.358 CDS ADOB02000003.1 151764 151306 -3 - 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229905.peg.359 CDS ADOB02000003.1 153626 152028 -2 - 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229905.peg.360 CDS ADOB02000003.1 154851 154168 -3 - 684 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229905.peg.361 CDS ADOB02000003.1 155516 154854 -2 - 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229905.peg.362 CDS ADOB02000003.1 156240 155521 -3 - 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229905.peg.363 CDS ADOB02000003.1 156995 156261 -2 - 735 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229905.peg.364 CDS ADOB02000003.1 157720 157136 -1 - 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229905.peg.365 CDS ADOB02000003.1 161343 157822 -3 - 3522 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229905.peg.366 CDS ADOB02000003.1 161581 161408 -1 - 174 hypothetical protein - none -
fig|6666666.229905.peg.367 CDS ADOB02000003.1 163544 161622 -2 - 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229905.peg.368 CDS ADOB02000003.1 164246 163548 -2 - 699 unknown - none -
fig|6666666.229905.peg.369 CDS ADOB02000003.1 164872 164408 -1 - 465 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229905.peg.370 CDS ADOB02000003.1 165473 165360 -2 - 114 hypothetical protein - none -
fig|6666666.229905.peg.371 CDS ADOB02000003.1 165439 165669 1 + 231 Flp pilus assembly protein, pilin Flp Widespread colonization island
fig|6666666.229905.peg.372 CDS ADOB02000003.1 166262 166438 2 + 177 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229905.peg.373 CDS ADOB02000003.1 166489 167313 1 + 825 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229905.peg.374 CDS ADOB02000003.1 167435 168697 2 + 1263 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229905.peg.375 CDS ADOB02000003.1 168694 169197 1 + 504 Flp pilus assembly protein RcpB Widespread colonization island
fig|6666666.229905.peg.376 CDS ADOB02000003.1 169213 170337 1 + 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229905.peg.377 CDS ADOB02000003.1 170351 171631 2 + 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229905.peg.378 CDS ADOB02000003.1 171631 172518 1 + 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229905.peg.379 CDS ADOB02000003.1 172515 173381 3 + 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229905.peg.380 CDS ADOB02000003.1 173371 174132 1 + 762 Flp pilus assembly protein TadD, contains TPR repeat Widespread colonization island
fig|6666666.229905.peg.381 CDS ADOB02000003.1 175385 177022 2 + 1638 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229905.peg.382 CDS ADOB02000003.1 178236 178000 -3 - 237 Mobile element protein - none -
fig|6666666.229905.peg.383 CDS ADOB02000003.1 178396 178280 -1 - 117 hypothetical protein - none -
fig|6666666.229905.peg.384 CDS ADOB02000003.1 180722 179220 -2 - 1503 Sodium-dependent transporter - none -
fig|6666666.229905.peg.385 CDS ADOB02000003.1 181138 181413 1 + 276 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229905.peg.386 CDS ADOB02000003.1 181554 181865 3 + 312 Membrane protein, MgtC/SapB family - none -
fig|6666666.229905.peg.387 CDS ADOB02000003.1 182806 181904 -1 - 903 hypothetical protein - none -
fig|6666666.229905.peg.388 CDS ADOB02000003.1 184711 182852 -1 - 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229905.peg.389 CDS ADOB02000003.1 186102 184708 -3 - 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229905.peg.390 CDS ADOB02000003.1 186246 187961 3 + 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229905.peg.391 CDS ADOB02000003.1 188046 188234 3 + 189 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229905.peg.392 CDS ADOB02000003.1 188274 188528 3 + 255 YgfY COG2938 - none -
fig|6666666.229905.peg.393 CDS ADOB02000003.1 188661 189236 3 + 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229905.peg.394 CDS ADOB02000003.1 189275 189859 2 + 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229905.peg.395 CDS ADOB02000003.1 189942 190898 3 + 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229905.peg.396 CDS ADOB02000003.1 190908 191345 3 + 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229905.peg.397 CDS ADOB02000003.1 191426 191938 2 + 513 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229905.peg.398 CDS ADOB02000003.1 192032 192787 2 + 756 Short chain dehydrogenase - none -
fig|6666666.229905.peg.399 CDS ADOB02000003.1 194327 192867 -2 - 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229905.peg.400 CDS ADOB02000003.1 194442 194906 3 + 465 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229905.peg.401 CDS ADOB02000003.1 197337 194995 -3 - 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229905.peg.402 CDS ADOB02000003.1 197963 197403 -2 - 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229905.peg.403 CDS ADOB02000003.1 198162 198767 3 + 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229905.peg.404 CDS ADOB02000003.1 200070 198820 -3 - 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229905.peg.405 CDS ADOB02000003.1 200207 200088 -2 - 120 hypothetical protein - none -
fig|6666666.229905.peg.406 CDS ADOB02000003.1 200330 200644 2 + 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229905.peg.407 CDS ADOB02000003.1 200641 202530 1 + 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229905.peg.408 CDS ADOB02000003.1 202627 205047 1 + 2421 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229905.peg.409 CDS ADOB02000003.1 206016 205102 -3 - 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229905.peg.410 CDS ADOB02000004.1 112 1791 1 + 1680 FIG00698772: hypothetical protein - none -
fig|6666666.229905.peg.411 CDS ADOB02000004.1 1855 2664 1 + 810 Phage FAD/FMN-containing dehydrogenase - none -
fig|6666666.229905.peg.412 CDS ADOB02000004.1 2676 2921 3 + 246 hypothetical protein - none -
fig|6666666.229905.peg.413 CDS ADOB02000004.1 2955 3131 3 + 177 hypothetical protein - none -
fig|6666666.229905.peg.414 CDS ADOB02000005.1 4384 116 -1 - 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229905.peg.415 CDS ADOB02000005.1 8517 4489 -3 - 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229905.peg.416 CDS ADOB02000005.1 9159 8788 -3 - 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229905.peg.417 CDS ADOB02000005.1 9702 9211 -3 - 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229905.peg.418 CDS ADOB02000005.1 10049 9873 -2 - 177 hypothetical protein - none -
fig|6666666.229905.peg.419 CDS ADOB02000005.1 10753 10064 -1 - 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229905.peg.420 CDS ADOB02000005.1 11186 10758 -2 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229905.peg.421 CDS ADOB02000005.1 11893 11342 -1 - 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229905.peg.422 CDS ADOB02000005.1 12305 11895 -2 - 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229905.peg.423 CDS ADOB02000005.1 13451 12747 -2 - 705 hypothetical protein - none -
fig|6666666.229905.peg.424 CDS ADOB02000005.1 13935 13597 -3 - 339 hypothetical protein - none -
fig|6666666.229905.peg.425 CDS ADOB02000005.1 14568 14017 -3 - 552 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229905.peg.426 CDS ADOB02000005.1 14583 14915 3 + 333 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229905.peg.427 CDS ADOB02000005.1 14936 15082 2 + 147 hypothetical protein - none -
fig|6666666.229905.peg.428 CDS ADOB02000005.1 15265 15134 -1 - 132 hypothetical protein - none -
fig|6666666.229905.peg.429 CDS ADOB02000005.1 15578 15300 -2 - 279 hypothetical protein - none -
fig|6666666.229905.peg.430 CDS ADOB02000005.1 17264 15600 -2 - 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229905.peg.431 CDS ADOB02000005.1 18210 17269 -3 - 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229905.peg.432 CDS ADOB02000005.1 19742 18213 -2 - 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229905.peg.433 CDS ADOB02000005.1 20384 19854 -2 - 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229905.peg.434 CDS ADOB02000005.1 21067 20483 -1 - 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229905.peg.435 CDS ADOB02000005.1 21151 21417 1 + 267 Protein yihD - none -
fig|6666666.229905.peg.436 CDS ADOB02000005.1 21436 22053 1 + 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229905.peg.437 CDS ADOB02000005.1 22113 22442 3 + 330 Protein yifE - none -
fig|6666666.229905.peg.438 CDS ADOB02000005.1 22512 23609 3 + 1098 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) - none -
fig|6666666.229905.peg.439 CDS ADOB02000005.1 23611 24369 1 + 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229905.peg.440 CDS ADOB02000005.1 24556 25602 1 + 1047 hypothetical protein - none -
fig|6666666.229905.peg.441 CDS ADOB02000005.1 25687 28287 1 + 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229905.peg.442 CDS ADOB02000005.1 29311 28493 -1 - 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229905.peg.443 CDS ADOB02000005.1 31303 29507 -1 - 1797 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229905.peg.444 CDS ADOB02000005.1 32043 31351 -3 - 693 Metal-dependent hydrolase - none -
fig|6666666.229905.peg.445 CDS ADOB02000005.1 33401 32061 -2 - 1341 FIG00782214: hypothetical protein - none -
fig|6666666.229905.peg.446 CDS ADOB02000005.1 34778 33426 -2 - 1353 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229905.peg.447 CDS ADOB02000005.1 35643 34867 -3 - 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229905.peg.448 CDS ADOB02000005.1 36278 35646 -2 - 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229905.peg.449 CDS ADOB02000005.1 37519 36275 -1 - 1245 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) - none -
fig|6666666.229905.peg.450 CDS ADOB02000005.1 38343 37522 -3 - 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229905.peg.451 CDS ADOB02000005.1 38620 39378 1 + 759 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229905.peg.452 CDS ADOB02000005.1 39454 39792 1 + 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229905.peg.453 CDS ADOB02000005.1 39931 40863 1 + 933 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229905.peg.454 CDS ADOB02000005.1 40977 41606 3 + 630 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229905.peg.455 CDS ADOB02000005.1 41603 42586 2 + 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229905.peg.456 CDS ADOB02000005.1 42590 43372 2 + 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229905.peg.457 CDS ADOB02000005.1 43404 43928 3 + 525 FIG00696143: hypothetical protein - none -
fig|6666666.229905.peg.458 CDS ADOB02000005.1 44065 43925 -1 - 141 hypothetical protein - none -
fig|6666666.229905.peg.459 CDS ADOB02000005.1 44019 45329 3 + 1311 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229905.peg.460 CDS ADOB02000005.1 45934 45449 -1 - 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229905.peg.461 CDS ADOB02000005.1 46438 45974 -1 - 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229905.peg.462 CDS ADOB02000005.1 47225 46440 -2 - 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229905.peg.463 CDS ADOB02000005.1 47283 47459 3 + 177 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229905.peg.464 CDS ADOB02000005.1 47461 47961 1 + 501 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229905.peg.465 CDS ADOB02000005.1 47955 48197 3 + 243 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229905.peg.466 CDS ADOB02000005.1 48893 48261 -2 - 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229905.peg.467 CDS ADOB02000005.1 49788 48919 -3 - 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.468 CDS ADOB02000005.1 50011 50205 1 + 195 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229905.peg.469 CDS ADOB02000005.1 50169 51377 3 + 1209 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229905.peg.470 CDS ADOB02000005.1 51409 52467 1 + 1059 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229905.peg.471 CDS ADOB02000005.1 52448 53098 2 + 651 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229905.peg.472 CDS ADOB02000005.1 53092 53856 1 + 765 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229905.peg.473 CDS ADOB02000005.1 53872 54492 1 + 621 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229905.peg.474 CDS ADOB02000005.1 54564 55088 3 + 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229905.peg.475 CDS ADOB02000005.1 55105 55275 1 + 171 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.229905.peg.476 CDS ADOB02000005.1 55302 56321 3 + 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.477 CDS ADOB02000005.1 56368 57318 1 + 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229905.peg.478 CDS ADOB02000005.1 57425 58363 2 + 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229905.peg.479 CDS ADOB02000005.1 58388 59116 2 + 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229905.peg.480 CDS ADOB02000005.1 59390 59620 2 + 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.481 CDS ADOB02000005.1 59768 59655 -2 - 114 hypothetical protein - none -
fig|6666666.229905.peg.482 CDS ADOB02000005.1 59855 61090 2 + 1236 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229905.peg.483 CDS ADOB02000005.1 62453 61215 -2 - 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229905.peg.484 CDS ADOB02000005.1 62778 64034 3 + 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229905.peg.485 CDS ADOB02000005.1 64101 64409 3 + 309 Iojap protein - none -
fig|6666666.229905.peg.486 CDS ADOB02000005.1 64400 64936 2 + 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229905.peg.487 CDS ADOB02000005.1 64949 66910 2 + 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229905.peg.488 CDS ADOB02000005.1 66897 68018 3 + 1122 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229905.peg.489 CDS ADOB02000005.1 68067 68924 3 + 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229905.peg.490 CDS ADOB02000005.1 68955 70145 3 + 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229905.peg.491 CDS ADOB02000005.1 70218 70517 3 + 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229905.peg.492 CDS ADOB02000005.1 70563 71201 3 + 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229905.peg.493 CDS ADOB02000005.1 71266 72228 1 + 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229905.peg.494 CDS ADOB02000005.1 73785 72376 -3 - 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229905.peg.495 CDS ADOB02000005.1 73855 74367 1 + 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229905.peg.496 CDS ADOB02000005.1 74461 74616 1 + 156 hypothetical protein - none -
fig|6666666.229905.peg.497 CDS ADOB02000005.1 74609 74890 2 + 282 hypothetical protein - none -
fig|6666666.229905.peg.498 CDS ADOB02000005.1 74893 75681 1 + 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229905.peg.499 CDS ADOB02000005.1 76175 75708 -2 - 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229905.peg.500 CDS ADOB02000005.1 76209 76334 3 + 126 hypothetical protein - none -
fig|6666666.229905.peg.501 CDS ADOB02000005.1 76596 76477 -3 - 120 hypothetical protein - none -
fig|6666666.229905.peg.502 CDS ADOB02000005.1 78903 76777 -3 - 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229905.peg.503 CDS ADOB02000005.1 84520 79157 -1 - 5364 Autotransporter adhesin - none -
fig|6666666.229905.peg.504 CDS ADOB02000005.1 85386 85270 -3 - 117 hypothetical protein - none -
fig|6666666.229905.peg.505 CDS ADOB02000005.1 87190 85403 -1 - 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229905.peg.506 CDS ADOB02000005.1 87424 87245 -1 - 180 hypothetical protein - none -
fig|6666666.229905.peg.507 CDS ADOB02000005.1 87389 90865 2 + 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229905.peg.508 CDS ADOB02000005.1 91163 91321 2 + 159 hypothetical protein - none -
fig|6666666.229905.peg.509 CDS ADOB02000005.1 93448 91994 -1 - 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229905.peg.510 CDS ADOB02000005.1 95286 93937 -3 - 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229905.peg.511 CDS ADOB02000005.1 96963 95587 -3 - 1377 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229905.peg.512 CDS ADOB02000005.1 97864 97076 -1 - 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229905.peg.513 CDS ADOB02000005.1 98552 99997 2 + 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229905.peg.514 CDS ADOB02000005.1 100444 100653 1 + 210 Cold shock protein CspG Cold shock, CspA family of proteins
fig|6666666.229905.peg.515 CDS ADOB02000005.1 101683 100751 -1 - 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229905.peg.516 CDS ADOB02000005.1 101766 101635 -3 - 132 hypothetical protein - none -
fig|6666666.229905.peg.517 CDS ADOB02000005.1 102647 101766 -2 - 882 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229905.peg.518 CDS ADOB02000005.1 103633 102737 -1 - 897 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229905.peg.519 CDS ADOB02000005.1 105138 103630 -3 - 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229905.peg.520 CDS ADOB02000005.1 105568 105149 -1 - 420 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229905.peg.521 CDS ADOB02000005.1 105788 106387 2 + 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229905.peg.522 CDS ADOB02000005.1 106390 107187 1 + 798 Protein of unknown function DUF81 - none -
fig|6666666.229905.peg.523 CDS ADOB02000005.1 107196 107993 3 + 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229905.peg.524 CDS ADOB02000005.1 107990 108841 2 + 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229905.peg.525 CDS ADOB02000005.1 109167 109694 3 + 528 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229905.peg.526 CDS ADOB02000005.1 109795 110355 1 + 561 Protein of unknown function DUF414 - none -
fig|6666666.229905.peg.527 CDS ADOB02000005.1 110368 110802 1 + 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229905.peg.528 CDS ADOB02000005.1 110821 112188 1 + 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229905.peg.529 CDS ADOB02000005.1 112705 112262 -1 - 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229905.peg.530 CDS ADOB02000005.1 112877 113644 2 + 768 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229905.peg.531 CDS ADOB02000005.1 113756 114613 2 + 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229905.peg.532 CDS ADOB02000005.1 114653 115072 2 + 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229905.peg.533 CDS ADOB02000005.1 115054 115383 1 + 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229905.peg.534 CDS ADOB02000005.1 115364 116365 2 + 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229905.peg.535 CDS ADOB02000006.1 1508 81 -2 - 1428 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229905.peg.536 CDS ADOB02000006.1 2392 1520 -1 - 873 Integral membrane protein - none -
fig|6666666.229905.peg.537 CDS ADOB02000006.1 6958 2468 -1 - 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229905.peg.538 CDS ADOB02000006.1 7698 6958 -3 - 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229905.peg.539 CDS ADOB02000006.1 7907 7719 -2 - 189 hypothetical protein - none -
fig|6666666.229905.peg.540 CDS ADOB02000006.1 11224 7898 -1 - 3327 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229905.peg.541 CDS ADOB02000006.1 11175 11291 3 + 117 hypothetical protein - none -
fig|6666666.229905.peg.542 CDS ADOB02000006.1 12675 11347 -3 - 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229905.peg.543 CDS ADOB02000006.1 13733 12855 -2 - 879 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229905.peg.544 CDS ADOB02000006.1 14510 13908 -2 - 603 lipoprotein HlpB - none -
fig|6666666.229905.peg.545 CDS ADOB02000006.1 14946 14659 -3 - 288 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.229905.peg.546 CDS ADOB02000006.1 15160 15765 1 + 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229905.peg.547 CDS ADOB02000006.1 15719 15859 2 + 141 hypothetical protein - none -
fig|6666666.229905.peg.548 CDS ADOB02000006.1 17902 15884 -1 - 2019 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229905.peg.549 CDS ADOB02000007.1 434 231 -2 - 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229905.peg.550 CDS ADOB02000007.1 1453 521 -1 - 933 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin biosynthesis;
Biotin synthesis cluster;
Biotin synthesis cluster
fig|6666666.229905.peg.551 CDS ADOB02000007.1 1595 3061 2 + 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.229905.peg.552 CDS ADOB02000007.1 3832 3482 -1 - 351 phage-related putative DNA-binding protein - none -
fig|6666666.229905.peg.553 CDS ADOB02000007.1 4306 3836 -1 - 471 hypothetical protein - none -
fig|6666666.229905.peg.554 CDS ADOB02000007.1 5573 4875 -2 - 699 hypothetical protein - none -
fig|6666666.229905.peg.555 CDS ADOB02000007.1 5750 5577 -2 - 174 hypothetical protein - none -
fig|6666666.229905.peg.556 CDS ADOB02000007.1 5917 5753 -1 - 165 hypothetical protein - none -
fig|6666666.229905.peg.557 CDS ADOB02000007.1 6118 5927 -1 - 192 hypothetical protein - none -
fig|6666666.229905.peg.558 CDS ADOB02000007.1 6875 6354 -2 - 522 inhibition of exonuclease digestion of Mu DNA - none -
fig|6666666.229905.peg.559 CDS ADOB02000007.1 7229 6888 -2 - 342 hypothetical protein - none -
fig|6666666.229905.peg.560 CDS ADOB02000007.1 8411 7233 -2 - 1179 Eha - none -
fig|6666666.229905.peg.561 CDS ADOB02000007.1 10196 8424 -2 - 1773 Phage transposase - none -
fig|6666666.229905.peg.562 CDS ADOB02000007.1 11152 10208 -1 - 945 FIG00697991: hypothetical protein - none -
fig|6666666.229905.peg.563 CDS ADOB02000007.1 11469 11164 -3 - 306 Transcriptional regulator, IclR family - none -
fig|6666666.229905.peg.564 CDS ADOB02000007.1 11660 11481 -2 - 180 hypothetical protein - none -
fig|6666666.229905.peg.565 CDS ADOB02000007.1 11907 11671 -3 - 237 hypothetical protein - none -
fig|6666666.229905.peg.566 CDS ADOB02000007.1 12590 12751 2 + 162 hypothetical protein - none -
fig|6666666.229905.peg.567 CDS ADOB02000007.1 12778 13437 1 + 660 hypothetical protein - none -
fig|6666666.229905.peg.568 CDS ADOB02000007.1 13549 13427 -1 - 123 hypothetical protein - none -
fig|6666666.229905.peg.569 CDS ADOB02000007.1 14449 14102 -1 - 348 gene 66 protein - none -
fig|6666666.229905.peg.570 CDS ADOB02000007.1 14604 14972 3 + 369 Phage protein - none -
fig|6666666.229905.peg.571 CDS ADOB02000007.1 14975 15616 2 + 642 Phage lysin #murein transglycosylase - none -
fig|6666666.229905.peg.572 CDS ADOB02000007.1 15607 16053 1 + 447 hypothetical protein - none -
fig|6666666.229905.peg.573 CDS ADOB02000007.1 16150 16500 1 + 351 hypothetical protein - none -
fig|6666666.229905.peg.574 CDS ADOB02000007.1 16502 16807 2 + 306 Phage protein - none -
fig|6666666.229905.peg.575 CDS ADOB02000007.1 16816 17355 1 + 540 Phage terminase, small subunit Phage packaging machinery
fig|6666666.229905.peg.576 CDS ADOB02000007.1 17355 18965 3 + 1611 Phage terminase, large subunit Phage packaging machinery
fig|6666666.229905.peg.577 CDS ADOB02000007.1 18969 20471 3 + 1503 Mu-like prophage FluMu protein gp29 - none -
fig|6666666.229905.peg.578 CDS ADOB02000007.1 20464 21717 1 + 1254 Phage (Mu-like) virion morphogenesis protein - none -
fig|6666666.229905.peg.579 CDS ADOB02000007.1 21820 22311 1 + 492 possible bacteriophage Mu G-like protein - none -
fig|6666666.229905.peg.580 CDS ADOB02000007.1 22537 23565 1 + 1029 FIG00698681: hypothetical protein - none -
fig|6666666.229905.peg.581 CDS ADOB02000007.1 23562 23927 3 + 366 Phage protein - none -
fig|6666666.229905.peg.582 CDS ADOB02000007.1 23990 24916 2 + 927 hypothetical protein - none -
fig|6666666.229905.peg.583 CDS ADOB02000007.1 24926 25438 2 + 513 Phage protein - none -
fig|6666666.229905.peg.584 CDS ADOB02000007.1 25438 25884 1 + 447 Phage protein - none -
fig|6666666.229905.peg.585 CDS ADOB02000007.1 25881 26153 3 + 273 hypothetical protein - none -
fig|6666666.229905.peg.586 CDS ADOB02000007.1 26154 26900 3 + 747 Phage protein - none -
fig|6666666.229905.peg.587 CDS ADOB02000007.1 26959 27381 1 + 423 Phage protein - none -
fig|6666666.229905.peg.588 CDS ADOB02000007.1 27387 27572 3 + 186 hypothetical protein - none -
fig|6666666.229905.peg.589 CDS ADOB02000007.1 27802 27587 -1 - 216 hypothetical protein - none -
fig|6666666.229905.peg.590 CDS ADOB02000007.1 28902 28768 -3 - 135 hypothetical protein - none -
fig|6666666.229905.peg.591 CDS ADOB02000007.1 30093 29449 -3 - 645 hypothetical protein - none -
fig|6666666.229905.peg.592 CDS ADOB02000008.1 65 2848 2 + 2784 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229905.peg.593 CDS ADOB02000008.1 2934 3665 3 + 732 Minor pilin of type IV secretion complex, VirB5 - none -
fig|6666666.229905.peg.594 CDS ADOB02000008.1 3751 3933 1 + 183 hypothetical protein - none -
fig|6666666.229905.peg.595 CDS ADOB02000008.1 3953 4861 2 + 909 Integral inner membrane protein of type IV secretion complex (VirB6) - none -
fig|6666666.229905.peg.596 CDS ADOB02000008.1 5057 5764 2 + 708 Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB8 - none -
fig|6666666.229905.peg.597 CDS ADOB02000008.1 5776 6663 1 + 888 Outer membrane and periplasm component of type IV secretion of T-DNA complex, has secretin-like domain, VirB9 - none -
fig|6666666.229905.peg.598 CDS ADOB02000008.1 6674 7858 2 + 1185 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) - none -
fig|6666666.229905.peg.599 CDS ADOB02000008.1 7923 8957 3 + 1035 ATPase required for both assembly of type IV secretion complex and secretion of T-DNA complex, VirB11 - none -
fig|6666666.229905.peg.600 CDS ADOB02000008.1 8954 9253 2 + 300 hypothetical protein - none -
fig|6666666.229905.peg.601 CDS ADOB02000008.1 9253 11154 1 + 1902 Type IV secretion system protein VirD4 - none -
fig|6666666.229905.peg.602 CDS ADOB02000008.1 11595 11918 3 + 324 IncP-type conjugative transfer protein TrbM - none -
fig|6666666.229905.peg.603 CDS ADOB02000008.1 11927 12496 2 + 570 IncQ plasmid conjugative transfer protein TraQ (RP4 TrbM homolog) Conjugative transfer
fig|6666666.229905.peg.604 CDS ADOB02000008.1 13071 13244 3 + 174 hypothetical protein - none -
fig|6666666.229905.peg.605 CDS ADOB02000008.1 13590 13880 3 + 291 hypothetical protein - none -
fig|6666666.229905.peg.606 CDS ADOB02000008.1 13990 14229 1 + 240 hypothetical protein - none -
fig|6666666.229905.peg.607 CDS ADOB02000008.1 14239 16521 1 + 2283 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229905.peg.608 CDS ADOB02000008.1 16545 17021 3 + 477 hypothetical protein - none -
fig|6666666.229905.peg.609 CDS ADOB02000008.1 17064 17468 3 + 405 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229905.peg.610 CDS ADOB02000008.1 17750 17514 -2 - 237 hypothetical protein - none -
fig|6666666.229905.peg.611 CDS ADOB02000008.1 18191 18808 2 + 618 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229905.peg.612 CDS ADOB02000008.1 18810 19022 3 + 213 hypothetical protein - none -
fig|6666666.229905.peg.613 CDS ADOB02000008.1 19583 19750 2 + 168 hypothetical protein - none -
fig|6666666.229905.peg.614 CDS ADOB02000008.1 20821 19757 -1 - 1065 IncQ plasmid conjugative transfer DNA nicking endonuclease TraR (pTi VirD2 homolog) Conjugative transfer
fig|6666666.229905.peg.615 CDS ADOB02000008.1 21547 21047 -1 - 501 hypothetical protein - none -
fig|6666666.229905.peg.616 CDS ADOB02000009.1 163 696 1 + 534 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229905.peg.617 CDS ADOB02000009.1 1048 791 -1 - 258 transposase A - none -
fig|6666666.229905.peg.618 CDS ADOB02000009.1 1469 1203 -2 - 267 FIG00697940: hypothetical protein - none -
fig|6666666.229905.peg.619 CDS ADOB02000009.1 1590 2384 3 + 795 possible DNA-binding protein - none -
fig|6666666.229905.peg.620 CDS ADOB02000009.1 2914 3153 1 + 240 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229905.peg.621 CDS ADOB02000009.1 3156 3416 3 + 261 ABC transporter ATP-binding protein - none -
fig|6666666.229905.peg.622 CDS ADOB02000009.1 3419 3766 2 + 348 ABC transporter ATP-binding protein - none -
fig|6666666.229905.peg.623 CDS ADOB02000009.1 3763 4623 1 + 861 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229905.peg.624 CDS ADOB02000009.1 4696 4842 1 + 147 hypothetical protein - none -
fig|6666666.229905.peg.625 CDS ADOB02000009.1 4919 6367 2 + 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229905.peg.626 CDS ADOB02000009.1 6418 12189 1 + 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229905.peg.627 CDS ADOB02000009.1 12320 13369 2 + 1050 Putative membrane protein YeiH - none -
fig|6666666.229905.peg.628 CDS ADOB02000009.1 13489 15846 1 + 2358 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229905.peg.629 CDS ADOB02000009.1 16630 15956 -1 - 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229905.peg.630 CDS ADOB02000009.1 17168 16707 -2 - 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229905.peg.631 CDS ADOB02000009.1 18995 17223 -2 - 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229905.peg.632 CDS ADOB02000009.1 19343 20434 2 + 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229905.peg.633 CDS ADOB02000009.1 20526 21275 3 + 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229905.peg.634 CDS ADOB02000009.1 21316 22176 1 + 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229905.peg.635 CDS ADOB02000009.1 22170 22865 3 + 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229905.peg.636 CDS ADOB02000009.1 24162 22948 -3 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229905.peg.637 CDS ADOB02000009.1 24276 24413 3 + 138 hypothetical protein - none -
fig|6666666.229905.peg.638 CDS ADOB02000009.1 24457 24621 1 + 165 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229905.peg.639 CDS ADOB02000009.1 25169 24906 -2 - 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229905.peg.640 CDS ADOB02000009.1 25296 26030 3 + 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229905.peg.641 CDS ADOB02000009.1 26049 26954 3 + 906 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229905.peg.642 CDS ADOB02000009.1 27007 27198 1 + 192 hypothetical protein - none -
fig|6666666.229905.peg.643 CDS ADOB02000009.1 27855 27250 -3 - 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229905.peg.644 CDS ADOB02000009.1 29353 27959 -1 - 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229905.peg.645 CDS ADOB02000009.1 29563 30012 1 + 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229905.peg.646 CDS ADOB02000009.1 30051 30179 3 + 129 RNA-binding domain protein - none -
fig|6666666.229905.peg.647 CDS ADOB02000009.1 30207 30356 3 + 150 RNA-binding domain protein - none -
fig|6666666.229905.peg.648 CDS ADOB02000009.1 30708 30971 3 + 264 hypothetical protein - none -
fig|6666666.229905.peg.649 CDS ADOB02000009.1 31055 33919 2 + 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229905.peg.650 CDS ADOB02000009.1 33986 34879 2 + 894 hypothetical protein - none -
fig|6666666.229905.peg.651 CDS ADOB02000009.1 35114 34998 -2 - 117 HipA protein Persister Cells
fig|6666666.229905.peg.652 CDS ADOB02000009.1 35446 35108 -1 - 339 HipA protein Persister Cells
fig|6666666.229905.peg.653 CDS ADOB02000009.1 35777 35496 -2 - 282 HipB protein Persister Cells
fig|6666666.229905.peg.654 CDS ADOB02000009.1 37435 35921 -1 - 1515 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229905.peg.655 CDS ADOB02000009.1 38608 37448 -1 - 1161 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229905.peg.656 CDS ADOB02000009.1 38817 39299 3 + 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229905.peg.657 CDS ADOB02000009.1 41397 39418 -3 - 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229905.peg.658 CDS ADOB02000009.1 42258 41470 -3 - 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229905.peg.659 CDS ADOB02000009.1 43206 42349 -3 - 858 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229905.peg.660 CDS ADOB02000009.1 44003 43329 -2 - 675 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229905.peg.661 CDS ADOB02000009.1 44389 43964 -1 - 426 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229905.peg.662 CDS ADOB02000009.1 46087 44579 -1 - 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229905.peg.663 CDS ADOB02000009.1 47046 46144 -3 - 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229905.peg.664 CDS ADOB02000009.1 47326 47165 -1 - 162 hypothetical protein - none -
fig|6666666.229905.peg.665 CDS ADOB02000009.1 47410 48093 1 + 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229905.peg.666 CDS ADOB02000009.1 48106 49827 1 + 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229905.peg.667 CDS ADOB02000009.1 49860 50507 3 + 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229905.peg.668 CDS ADOB02000009.1 50524 51216 1 + 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229905.peg.669 CDS ADOB02000009.1 51395 52090 2 + 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229905.peg.670 CDS ADOB02000009.1 52097 52600 2 + 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229905.peg.671 CDS ADOB02000009.1 52600 53253 1 + 654 Substrate-specific component NikM of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229905.peg.672 CDS ADOB02000009.1 53250 53915 3 + 666 Transmembrane component NikQ of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229905.peg.673 CDS ADOB02000009.1 53912 54535 2 + 624 ATPase component NikO of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229905.peg.674 CDS ADOB02000009.1 54614 55423 2 + 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB NiFe hydrogenase maturation
fig|6666666.229905.peg.675 CDS ADOB02000009.1 55450 57318 1 + 1869 [NiFe] hydrogenase metallocenter assembly protein HypD NiFe hydrogenase maturation
fig|6666666.229905.peg.676 CDS ADOB02000009.1 57340 57492 1 + 153 hypothetical protein - none -
fig|6666666.229905.peg.677 CDS ADOB02000009.1 60098 59283 -2 - 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229905.peg.678 CDS ADOB02000009.1 61132 60248 -1 - 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229905.peg.679 CDS ADOB02000009.1 62374 61307 -1 - 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229905.peg.680 CDS ADOB02000009.1 63497 62379 -2 - 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229905.peg.681 CDS ADOB02000009.1 63634 65124 1 + 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229905.peg.682 CDS ADOB02000009.1 66330 65269 -3 - 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229905.peg.683 CDS ADOB02000009.1 67045 66317 -1 - 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229905.peg.684 CDS ADOB02000009.1 67887 67123 -3 - 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229905.peg.685 CDS ADOB02000009.1 68114 68893 2 + 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229905.peg.686 CDS ADOB02000009.1 69114 70457 3 + 1344 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229905.peg.687 CDS ADOB02000009.1 71120 70524 -2 - 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229905.peg.688 CDS ADOB02000009.1 72157 71129 -1 - 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229905.peg.689 CDS ADOB02000009.1 73290 72166 -3 - 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229905.peg.690 CDS ADOB02000009.1 73742 73290 -2 - 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229905.peg.691 CDS ADOB02000009.1 74920 73859 -1 - 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229905.peg.692 CDS ADOB02000009.1 75845 74940 -2 - 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229905.peg.693 CDS ADOB02000009.1 76307 77326 2 + 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229905.peg.694 CDS ADOB02000009.1 77694 78434 3 + 741 FIG00698611: hypothetical protein - none -
fig|6666666.229905.peg.695 CDS ADOB02000009.1 79525 78590 -1 - 936 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229905.peg.696 CDS ADOB02000009.1 79781 80248 2 + 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229905.peg.697 CDS ADOB02000009.1 80272 81159 1 + 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229905.peg.698 CDS ADOB02000009.1 81350 81931 2 + 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.699 CDS ADOB02000009.1 81931 82521 1 + 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.700 CDS ADOB02000009.1 82522 84759 1 + 2238 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.701 CDS ADOB02000009.1 84770 85849 2 + 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.702 CDS ADOB02000009.1 85856 86476 2 + 621 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.703 CDS ADOB02000009.1 86469 87254 3 + 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.704 CDS ADOB02000009.1 87401 88036 2 + 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229905.peg.705 CDS ADOB02000009.1 88061 89428 2 + 1368 sodium-dependent transporter - none -
fig|6666666.229905.peg.706 CDS ADOB02000009.1 90608 89823 -2 - 786 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229905.peg.707 CDS ADOB02000009.1 91393 90620 -1 - 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229905.peg.708 CDS ADOB02000009.1 91582 93114 1 + 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229905.peg.709 CDS ADOB02000009.1 93980 93222 -2 - 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229905.peg.710 CDS ADOB02000009.1 94915 93992 -1 - 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229905.peg.711 CDS ADOB02000009.1 95888 94923 -2 - 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229905.peg.712 CDS ADOB02000009.1 96847 95948 -1 - 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229905.peg.713 CDS ADOB02000009.1 97076 99052 2 + 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229905.peg.714 CDS ADOB02000009.1 99986 99126 -2 - 861 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229905.peg.715 CDS ADOB02000009.1 100286 100152 -2 - 135 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229905.peg.716 CDS ADOB02000009.1 100411 100827 1 + 417 Protein ygiW precursor - none -
fig|6666666.229905.peg.717 CDS ADOB02000009.1 100965 101636 3 + 672 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229905.peg.718 CDS ADOB02000009.1 101623 102999 1 + 1377 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229905.peg.719 CDS ADOB02000009.1 104906 103125 -2 - 1782 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229905.peg.720 CDS ADOB02000009.1 105384 105139 -3 - 246 FIG00696862: hypothetical protein - none -
fig|6666666.229905.peg.721 CDS ADOB02000009.1 106915 105578 -1 - 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229905.peg.722 CDS ADOB02000009.1 107837 107010 -2 - 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229905.peg.723 CDS ADOB02000009.1 108124 108008 -1 - 117 hypothetical protein - none -
fig|6666666.229905.peg.724 CDS ADOB02000009.1 108194 109777 2 + 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229905.peg.725 CDS ADOB02000009.1 109964 110314 2 + 351 YPPCP.09C homologue - none -
fig|6666666.229905.peg.726 CDS ADOB02000009.1 110311 110610 1 + 300 Putative transcriptional regulator - none -
fig|6666666.229905.peg.727 CDS ADOB02000009.1 113579 110646 -2 - 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229905.peg.728 CDS ADOB02000009.1 114284 116308 2 + 2025 CRISPR-associated protein Cas3@1@1 CRISPRs
fig|6666666.229905.peg.729 CDS ADOB02000009.1 116814 117320 3 + 507 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229905.peg.730 CDS ADOB02000009.1 117310 119064 1 + 1755 Overcoming lysogenization defect protein - none -
fig|6666666.229905.peg.731 CDS ADOB02000009.1 119187 120131 3 + 945 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229905.peg.732 CDS ADOB02000009.1 120135 120428 3 + 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229905.peg.733 CDS ADOB02000009.1 121118 121498 2 + 381 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229905.peg.734 CDS ADOB02000009.1 121520 122524 2 + 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229905.peg.735 CDS ADOB02000009.1 122533 124161 1 + 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229905.peg.736 CDS ADOB02000009.1 124145 124792 2 + 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229905.peg.737 CDS ADOB02000009.1 124837 125841 1 + 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229905.peg.738 CDS ADOB02000009.1 127321 125939 -1 - 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229905.peg.739 CDS ADOB02000009.1 127384 127554 1 + 171 hypothetical protein - none -
fig|6666666.229905.peg.740 CDS ADOB02000009.1 127922 127512 -2 - 411 probable membrane protein YPO3565 - none -
fig|6666666.229905.peg.741 CDS ADOB02000009.1 129856 128093 -1 - 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229905.peg.742 CDS ADOB02000009.1 131152 129947 -1 - 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229905.peg.743 CDS ADOB02000009.1 131328 131666 3 + 339 FIG00904093: hypothetical protein - none -
fig|6666666.229905.peg.744 CDS ADOB02000009.1 131855 133348 2 + 1494 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229905.peg.745 CDS ADOB02000009.1 134104 133406 -1 - 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229905.peg.746 CDS ADOB02000009.1 134125 134826 1 + 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229905.peg.747 CDS ADOB02000009.1 135011 136315 2 + 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229905.peg.748 CDS ADOB02000009.1 136377 137600 3 + 1224 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229905.peg.749 CDS ADOB02000009.1 138981 138337 -3 - 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229905.peg.750 CDS ADOB02000009.1 140403 139114 -3 - 1290 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229905.peg.751 CDS ADOB02000009.1 140751 140410 -3 - 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229905.peg.752 CDS ADOB02000009.1 141773 140757 -2 - 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229905.peg.753 CDS ADOB02000009.1 141967 142353 1 + 387 Integral membrane protein - none -
fig|6666666.229905.peg.754 CDS ADOB02000009.1 142478 143419 2 + 942 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229905.peg.755 CDS ADOB02000009.1 143373 143498 3 + 126 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229905.peg.756 CDS ADOB02000009.1 144872 143526 -2 - 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229905.peg.757 CDS ADOB02000009.1 145761 144904 -3 - 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229905.peg.758 CDS ADOB02000009.1 146777 145824 -2 - 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229905.peg.759 CDS ADOB02000009.1 148559 149509 2 + 951 hypothetical protein - none -
fig|6666666.229905.peg.760 CDS ADOB02000009.1 149946 150080 3 + 135 hypothetical protein - none -
fig|6666666.229905.peg.761 CDS ADOB02000009.1 151039 150815 -1 - 225 hypothetical protein - none -
fig|6666666.229905.peg.762 CDS ADOB02000009.1 151460 151104 -2 - 357 ORF_ID:slr6051 hypothetical protein - none -
fig|6666666.229905.peg.763 CDS ADOB02000009.1 151544 151903 2 + 360 phage-related protein - none -
fig|6666666.229905.peg.764 CDS ADOB02000009.1 152348 151929 -2 - 420 hypothetical protein - none -
fig|6666666.229905.peg.765 CDS ADOB02000009.1 152582 152400 -2 - 183 hypothetical protein - none -
fig|6666666.229905.peg.766 CDS ADOB02000009.1 152835 153986 3 + 1152 Family of unknown function (DUF450) family - none -
fig|6666666.229905.peg.767 CDS ADOB02000009.1 153958 154086 1 + 129 hypothetical protein - none -
fig|6666666.229905.peg.768 CDS ADOB02000009.1 154297 155535 1 + 1239 Phage tail fibers Phage tail fiber proteins
fig|6666666.229905.peg.769 CDS ADOB02000009.1 155535 156146 3 + 612 Phage tail fibers Phage tail fiber proteins
fig|6666666.229905.peg.770 CDS ADOB02000009.1 156901 156143 -1 - 759 Integrase - none -
fig|6666666.229905.peg.771 CDS ADOB02000009.1 158641 157082 -1 - 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229905.peg.772 CDS ADOB02000009.1 158939 158673 -2 - 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229905.peg.773 CDS ADOB02000009.1 159223 158951 -1 - 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229905.peg.774 CDS ADOB02000009.1 159448 159263 -1 - 186 hypothetical protein - none -
fig|6666666.229905.peg.775 CDS ADOB02000009.1 160830 159478 -3 - 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229905.peg.776 CDS ADOB02000009.1 161269 161724 1 + 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229905.peg.777 CDS ADOB02000009.1 161748 163244 3 + 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229905.peg.778 CDS ADOB02000009.1 164754 165671 3 + 918 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229905.peg.779 CDS ADOB02000009.1 166203 166589 3 + 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229905.peg.780 CDS ADOB02000009.1 166589 167506 2 + 918 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229905.peg.781 CDS ADOB02000009.1 167700 167548 -3 - 153 hypothetical protein - none -
fig|6666666.229905.peg.782 CDS ADOB02000009.1 169720 168533 -1 - 1188 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229905.peg.783 CDS ADOB02000009.1 170747 169968 -2 - 780 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229905.peg.784 CDS ADOB02000009.1 170988 172523 3 + 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229905.peg.785 CDS ADOB02000009.1 172534 173958 1 + 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229905.peg.786 CDS ADOB02000009.1 174139 174381 1 + 243 DNA-damage-inducible protein d - none -
fig|6666666.229905.peg.787 CDS ADOB02000009.1 174513 174352 -3 - 162 hypothetical protein - none -
fig|6666666.229905.peg.788 CDS ADOB02000009.1 174982 175830 1 + 849 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229905.peg.789 CDS ADOB02000009.1 176342 177451 2 + 1110 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229905.peg.790 CDS ADOB02000009.1 177689 178759 2 + 1071 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229905.peg.791 CDS ADOB02000009.1 178756 179625 1 + 870 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229905.peg.792 CDS ADOB02000009.1 179622 180470 3 + 849 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229905.peg.793 CDS ADOB02000009.1 180490 181581 1 + 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229905.peg.794 CDS ADOB02000009.1 183795 181966 -3 - 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229905.peg.795 CDS ADOB02000009.1 184707 183934 -3 - 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) - none -
fig|6666666.229905.peg.796 CDS ADOB02000009.1 184888 184709 -1 - 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.229905.peg.797 CDS ADOB02000009.1 185884 184910 -1 - 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) - none -
fig|6666666.229905.peg.798 CDS ADOB02000009.1 187651 185903 -1 - 1749 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229905.peg.799 CDS ADOB02000009.1 190127 187698 -2 - 2430 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.229905.peg.800 CDS ADOB02000009.1 190425 190862 3 + 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229905.peg.801 CDS ADOB02000009.1 190979 192925 2 + 1947 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229905.peg.802 CDS ADOB02000009.1 193358 192996 -2 - 363 hypothetical protein - none -
fig|6666666.229905.peg.803 CDS ADOB02000009.1 195840 193705 -3 - 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229905.peg.804 CDS ADOB02000009.1 197112 195910 -3 - 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229905.peg.805 CDS ADOB02000009.1 197380 197823 1 + 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229905.peg.806 CDS ADOB02000009.1 198002 198544 2 + 543 Colicin V production protein - none -
fig|6666666.229905.peg.807 CDS ADOB02000009.1 198666 198541 -3 - 126 hypothetical protein - none -
fig|6666666.229905.peg.808 CDS ADOB02000009.1 200763 198688 -3 - 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229905.peg.809 CDS ADOB02000009.1 203256 200866 -3 - 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229905.peg.810 CDS ADOB02000009.1 203425 206139 1 + 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229905.peg.811 CDS ADOB02000009.1 207167 206292 -2 - 876 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229905.peg.812 CDS ADOB02000009.1 207546 210203 3 + 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229905.peg.813 CDS ADOB02000009.1 210232 211902 1 + 1671 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229905.peg.814 CDS ADOB02000009.1 211939 213420 1 + 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229905.peg.815 CDS ADOB02000009.1 213625 213506 -1 - 120 hypothetical protein - none -
fig|6666666.229905.peg.816 CDS ADOB02000009.1 214404 213850 -3 - 555 FIG002003: Protein YdjA - none -
fig|6666666.229905.peg.817 CDS ADOB02000009.1 214535 216415 2 + 1881 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229905.peg.818 CDS ADOB02000009.1 216456 217580 3 + 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229905.peg.819 CDS ADOB02000009.1 218273 219259 2 + 987 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229905.peg.820 CDS ADOB02000009.1 219271 220242 1 + 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229905.peg.821 CDS ADOB02000009.1 220327 221154 1 + 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229905.peg.822 CDS ADOB02000009.1 221589 221269 -3 - 321 putative cytoplasmic protein - none -
fig|6666666.229905.peg.823 CDS ADOB02000009.1 221757 221623 -3 - 135 hypothetical protein - none -
fig|6666666.229905.peg.824 CDS ADOB02000009.1 223058 222060 -2 - 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229905.peg.825 CDS ADOB02000009.1 224467 223364 -1 - 1104 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229905.peg.826 CDS ADOB02000009.1 224660 225373 2 + 714 SanA protein - none -
fig|6666666.229905.peg.827 CDS ADOB02000009.1 226343 225357 -2 - 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229905.peg.828 CDS ADOB02000009.1 227178 227435 3 + 258 FIG00699498: hypothetical protein - none -
fig|6666666.229905.peg.829 CDS ADOB02000009.1 227590 227471 -1 - 120 FIG00697497: hypothetical protein - none -
fig|6666666.229905.peg.830 CDS ADOB02000009.1 229089 228607 -3 - 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229905.peg.831 CDS ADOB02000009.1 229745 229104 -2 - 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229905.peg.832 CDS ADOB02000009.1 230819 229749 -2 - 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229905.peg.833 CDS ADOB02000009.1 231035 231727 2 + 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229905.peg.834 CDS ADOB02000009.1 232420 231833 -1 - 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229905.peg.835 CDS ADOB02000009.1 233069 232485 -2 - 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229905.peg.836 CDS ADOB02000009.1 233450 233082 -2 - 369 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229905.peg.837 CDS ADOB02000009.1 235175 233451 -2 - 1725 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229905.peg.838 CDS ADOB02000009.1 235252 236100 1 + 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229905.peg.839 CDS ADOB02000009.1 236370 237959 3 + 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229905.peg.840 CDS ADOB02000009.1 238136 239473 2 + 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229905.peg.841 CDS ADOB02000009.1 240166 239576 -1 - 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229905.peg.842 CDS ADOB02000009.1 240359 241417 2 + 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229905.peg.843 CDS ADOB02000009.1 241596 242420 3 + 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229905.peg.844 CDS ADOB02000009.1 243354 242479 -3 - 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229905.peg.845 CDS ADOB02000009.1 243595 245526 1 + 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229905.peg.846 CDS ADOB02000009.1 245782 246228 1 + 447 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229905.peg.847 CDS ADOB02000009.1 246273 247001 3 + 729 Type III restriction-modification system restriction subunit (EC 3.1.21.5) - none -
fig|6666666.229905.peg.848 CDS ADOB02000009.1 247004 247303 2 + 300 Type III restriction-modification system restriction subunit (EC 3.1.21.5) - none -
fig|6666666.229905.peg.849 CDS ADOB02000009.1 247305 247442 3 + 138 hypothetical protein - none -
fig|6666666.229905.peg.850 CDS ADOB02000009.1 248199 247420 -3 - 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229905.peg.851 CDS ADOB02000009.1 248574 249053 3 + 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229905.peg.852 CDS ADOB02000009.1 249197 249054 -2 - 144 hypothetical protein - none -
fig|6666666.229905.peg.853 CDS ADOB02000009.1 249528 249881 3 + 354 LSU ribosomal protein L20p Ribosome LSU bacterial
fig|6666666.229905.peg.854 CDS ADOB02000009.1 250043 249930 -2 - 114 hypothetical protein - none -
fig|6666666.229905.peg.855 CDS ADOB02000009.1 251331 251212 -3 - 120 hypothetical protein - none -
fig|6666666.229905.peg.856 CDS ADOB02000009.1 251422 252372 1 + 951 Tagatose 1,6-bisphosphate aldolase (EC 4.1.2.40) - none -
fig|6666666.229905.peg.857 CDS ADOB02000009.1 252390 252839 3 + 450 Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144) - none -
fig|6666666.229905.peg.858 CDS ADOB02000010.1 461 105 -2 - 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229905.peg.859 CDS ADOB02000010.1 2717 486 -2 - 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229905.peg.860 CDS ADOB02000010.1 4043 2727 -2 - 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229905.peg.861 CDS ADOB02000010.1 4731 4045 -3 - 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229905.peg.862 CDS ADOB02000010.1 5876 5028 -2 - 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229905.peg.863 CDS ADOB02000010.1 6753 6031 -3 - 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229905.peg.864 CDS ADOB02000010.1 7217 6828 -2 - 390 Patatin-like phospholipase - none -
fig|6666666.229905.peg.865 CDS ADOB02000010.1 8223 7336 -3 - 888 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229905.peg.866 CDS ADOB02000010.1 9114 8251 -3 - 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229905.peg.867 CDS ADOB02000010.1 9232 9948 1 + 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229905.peg.868 CDS ADOB02000010.1 9958 10602 1 + 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229905.peg.869 CDS ADOB02000010.1 10684 11559 1 + 876 DnaJ-like protein DjlA - none -
fig|6666666.229905.peg.870 CDS ADOB02000010.1 11563 12567 1 + 1005 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229905.peg.871 CDS ADOB02000010.1 13611 12553 -3 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229905.peg.872 CDS ADOB02000010.1 15006 13627 -3 - 1380 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229905.peg.873 CDS ADOB02000010.1 16226 15228 -2 - 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229905.peg.874 CDS ADOB02000010.1 16786 16445 -1 - 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229905.peg.875 CDS ADOB02000010.1 17584 16817 -1 - 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229905.peg.876 CDS ADOB02000010.1 17750 18940 2 + 1191 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229905.peg.877 CDS ADOB02000010.1 18918 19196 3 + 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229905.peg.878 CDS ADOB02000010.1 19199 20278 2 + 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229905.peg.879 CDS ADOB02000010.1 20673 20798 3 + 126 hypothetical protein - none -
fig|6666666.229905.peg.880 CDS ADOB02000010.1 21372 20779 -3 - 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229905.peg.881 CDS ADOB02000010.1 21476 21787 2 + 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229905.peg.882 CDS ADOB02000010.1 21797 21913 2 + 117 hypothetical protein - none -
fig|6666666.229905.peg.883 CDS ADOB02000010.1 21951 22118 3 + 168 hypothetical protein - none -
fig|6666666.229905.peg.884 CDS ADOB02000010.1 22143 23483 3 + 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.885 CDS ADOB02000010.1 23486 24721 2 + 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.886 CDS ADOB02000010.1 24714 25499 3 + 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.887 CDS ADOB02000010.1 25499 26128 2 + 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.888 CDS ADOB02000010.1 26132 26728 2 + 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.889 CDS ADOB02000010.1 26740 27975 1 + 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.890 CDS ADOB02000010.1 27980 28129 2 + 150 hypothetical protein - none -
fig|6666666.229905.peg.891 CDS ADOB02000010.1 28126 29214 1 + 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229905.peg.892 CDS ADOB02000010.1 29293 29550 1 + 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229905.peg.893 CDS ADOB02000010.1 29811 30962 3 + 1152 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229905.peg.894 CDS ADOB02000010.1 31415 31531 2 + 117 hypothetical protein - none -
fig|6666666.229905.peg.895 CDS ADOB02000010.1 31600 32910 1 + 1311 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.229905.peg.896 CDS ADOB02000010.1 33425 33006 -2 - 420 Putative Holliday junction resolvase YqgF - none -
fig|6666666.229905.peg.897 CDS ADOB02000010.1 33982 33425 -1 - 558 UPF0301 protein YqgE - none -
fig|6666666.229905.peg.898 CDS ADOB02000010.1 34634 33999 -2 - 636 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229905.peg.899 CDS ADOB02000010.1 34732 34863 1 + 132 hypothetical protein - none -
fig|6666666.229905.peg.900 CDS ADOB02000010.1 35137 34820 -1 - 318 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229905.peg.901 CDS ADOB02000010.1 36179 35292 -2 - 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229905.peg.902 CDS ADOB02000010.1 37619 36255 -2 - 1365 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229905.peg.903 CDS ADOB02000010.1 37833 37651 -3 - 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229905.peg.904 CDS ADOB02000010.1 40580 37956 -2 - 2625 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229905.peg.905 CDS ADOB02000010.1 41205 40780 -3 - 426 Universal stress protein A Universal stress protein family
fig|6666666.229905.peg.906 CDS ADOB02000010.1 41324 42181 2 + 858 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229905.peg.907 CDS ADOB02000010.1 43268 42279 -2 - 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229905.peg.908 CDS ADOB02000010.1 45266 43527 -2 - 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229905.peg.909 CDS ADOB02000010.1 45495 45271 -3 - 225 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229905.peg.910 CDS ADOB02000010.1 45622 46647 1 + 1026 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229905.peg.911 CDS ADOB02000010.1 46713 47126 3 + 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229905.peg.912 CDS ADOB02000010.1 47168 47863 2 + 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229905.peg.913 CDS ADOB02000010.1 47908 49296 1 + 1389 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229905.peg.914 CDS ADOB02000010.1 50560 49352 -1 - 1209 Sodium/glutamate symport protein - none -
fig|6666666.229905.peg.915 CDS ADOB02000010.1 51160 50726 -1 - 435 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229905.peg.916 CDS ADOB02000010.1 51987 51157 -3 - 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229905.peg.917 CDS ADOB02000010.1 52457 51984 -2 - 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229905.peg.918 CDS ADOB02000010.1 53128 52460 -1 - 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229905.peg.919 CDS ADOB02000010.1 53254 54753 1 + 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.229905.peg.920 CDS ADOB02000010.1 55092 55907 3 + 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229905.peg.921 CDS ADOB02000010.1 56878 55985 -1 - 894 Transcriptional regulator, LysR family - none -
fig|6666666.229905.peg.922 CDS ADOB02000010.1 57237 58082 3 + 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229905.peg.923 CDS ADOB02000010.1 58146 59126 3 + 981 Aldo-keto reductase - none -
fig|6666666.229905.peg.924 CDS ADOB02000010.1 59352 60407 3 + 1056 Carboxylesterase type B - none -
fig|6666666.229905.peg.925 CDS ADOB02000010.1 60675 61007 3 + 333 Carboxylesterase type B - none -
fig|6666666.229905.peg.926 CDS ADOB02000010.1 61144 62253 1 + 1110 Putative exported protein precursor - none -
fig|6666666.229905.peg.927 CDS ADOB02000010.1 63282 62392 -3 - 891 Transcriptional regulator, LysR family - none -
fig|6666666.229905.peg.928 CDS ADOB02000010.1 63352 63471 1 + 120 hypothetical protein - none -
fig|6666666.229905.peg.929 CDS ADOB02000010.1 63484 63813 1 + 330 FIG01220323: hypothetical protein - none -
fig|6666666.229905.peg.930 CDS ADOB02000010.1 63797 64438 2 + 642 FIG01220323: hypothetical protein - none -
fig|6666666.229905.peg.931 CDS ADOB02000010.1 66422 64590 -2 - 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229905.peg.932 CDS ADOB02000010.1 67274 66477 -2 - 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229905.peg.933 CDS ADOB02000010.1 67672 67400 -1 - 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229905.peg.934 CDS ADOB02000010.1 68429 67839 -2 - 591 FIG01200173: hypothetical protein - none -
fig|6666666.229905.peg.935 CDS ADOB02000010.1 69511 68447 -1 - 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229905.peg.936 CDS ADOB02000010.1 70399 69524 -1 - 876 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229905.peg.937 CDS ADOB02000010.1 71092 70448 -1 - 645 converved hypothetical protein - none -
fig|6666666.229905.peg.938 CDS ADOB02000010.1 71350 72966 1 + 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.229905.peg.939 CDS ADOB02000010.1 74578 73031 -1 - 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229905.peg.940 CDS ADOB02000010.1 78462 74581 -3 - 3882 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229905.peg.941 CDS ADOB02000010.1 80349 78490 -3 - 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229905.peg.942 CDS ADOB02000010.1 81045 80416 -3 - 630 Nitrate/nitrite response regulator protein - none -
fig|6666666.229905.peg.943 CDS ADOB02000010.1 83556 81055 -3 - 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229905.peg.944 CDS ADOB02000010.1 83712 84638 3 + 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229905.peg.945 CDS ADOB02000010.1 84651 85397 3 + 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229905.peg.946 CDS ADOB02000010.1 85426 86811 1 + 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229905.peg.947 CDS ADOB02000010.1 86824 88074 1 + 1251 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229905.peg.948 CDS ADOB02000010.1 88878 88141 -3 - 738 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229905.peg.949 CDS ADOB02000010.1 89140 89421 1 + 282 hypothetical protein - none -
fig|6666666.229905.peg.950 CDS ADOB02000010.1 89607 90194 3 + 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229905.peg.951 CDS ADOB02000010.1 90965 90483 -2 - 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229905.peg.952 CDS ADOB02000010.1 91176 91310 3 + 135 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229905.peg.953 CDS ADOB02000010.1 92299 91700 -1 - 600 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229905.peg.954 CDS ADOB02000010.1 93444 92311 -3 - 1134 Sodium-dependent transporter - none -
fig|6666666.229905.peg.955 CDS ADOB02000010.1 93779 93495 -2 - 285 Sodium-dependent transporter - none -
fig|6666666.229905.peg.956 CDS ADOB02000010.1 93889 94776 1 + 888 RuBisCO operon transcriptional regulator CO2 uptake, carboxysome
fig|6666666.229905.peg.957 CDS ADOB02000010.1 94993 97308 1 + 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229905.peg.958 CDS ADOB02000010.1 98813 97356 -2 - 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229905.peg.959 CDS ADOB02000010.1 99847 98819 -1 - 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229905.peg.960 CDS ADOB02000010.1 101350 99863 -1 - 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229905.peg.961 CDS ADOB02000010.1 101513 102454 2 + 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229905.peg.962 CDS ADOB02000011.1 1923 535 -3 - 1389 Putative protease - none -
fig|6666666.229905.peg.963 CDS ADOB02000011.1 2459 2094 -2 - 366 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229905.peg.964 CDS ADOB02000011.1 2887 3225 1 + 339 conserved hypothetical protein - none -
fig|6666666.229905.peg.965 CDS ADOB02000011.1 3573 3283 -3 - 291 StbE replicon stabilization toxin - none -
fig|6666666.229905.peg.966 CDS ADOB02000011.1 3817 3563 -1 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229905.peg.967 CDS ADOB02000011.1 5026 4265 -1 - 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229905.peg.968 CDS ADOB02000011.1 5094 5561 3 + 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229905.peg.969 CDS ADOB02000011.1 6971 5640 -2 - 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229905.peg.970 CDS ADOB02000011.1 8127 6982 -3 - 1146 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229905.peg.971 CDS ADOB02000011.1 9236 8154 -2 - 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229905.peg.972 CDS ADOB02000011.1 9411 9295 -3 - 117 hypothetical protein - none -
fig|6666666.229905.peg.973 CDS ADOB02000011.1 9436 9768 1 + 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229905.peg.974 CDS ADOB02000011.1 11512 9923 -1 - 1590 L-lactate permease Lactate utilization
fig|6666666.229905.peg.975 CDS ADOB02000011.1 12900 11755 -3 - 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229905.peg.976 CDS ADOB02000011.1 13352 13206 -2 - 147 hypothetical protein - none -
fig|6666666.229905.peg.977 CDS ADOB02000011.1 14479 13529 -1 - 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229905.peg.978 CDS ADOB02000011.1 15431 14520 -2 - 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229905.peg.979 CDS ADOB02000011.1 16054 15431 -1 - 624 Outer membrane lipoprotein LolB precursor - none -
fig|6666666.229905.peg.980 CDS ADOB02000011.1 17393 16089 -2 - 1305 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229905.peg.981 CDS ADOB02000011.1 18004 17393 -1 - 612 SH3 domain protein - none -
fig|6666666.229905.peg.982 CDS ADOB02000011.1 19338 18073 -3 - 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229905.peg.983 CDS ADOB02000011.1 20044 19364 -1 - 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229905.peg.984 CDS ADOB02000011.1 20209 21363 1 + 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229905.peg.985 CDS ADOB02000011.1 21366 22739 3 + 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229905.peg.986 CDS ADOB02000011.1 23278 23757 1 + 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229905.peg.987 CDS ADOB02000011.1 23761 26505 1 + 2745 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229905.peg.988 CDS ADOB02000011.1 26598 27215 3 + 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229905.peg.989 CDS ADOB02000011.1 27228 28568 3 + 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229905.peg.990 CDS ADOB02000011.1 30732 29065 -3 - 1668 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229905.peg.991 CDS ADOB02000011.1 31040 32356 2 + 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229905.peg.992 CDS ADOB02000011.1 32337 32450 3 + 114 hypothetical protein - none -
fig|6666666.229905.peg.993 CDS ADOB02000011.1 33331 32435 -1 - 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229905.peg.994 CDS ADOB02000011.1 34550 33453 -2 - 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229905.peg.995 CDS ADOB02000011.1 35454 34681 -3 - 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229905.peg.996 CDS ADOB02000011.1 36314 35454 -2 - 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229905.peg.997 CDS ADOB02000011.1 37416 36298 -3 - 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229905.peg.998 CDS ADOB02000011.1 37680 38924 3 + 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229905.peg.999 CDS ADOB02000011.1 41657 39000 -2 - 2658 Paraquat-inducible protein B Oxidative stress
fig|6666666.229905.peg.1000 CDS ADOB02000011.1 42903 41620 -3 - 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229905.peg.1001 CDS ADOB02000011.1 43121 43729 2 + 609 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229905.peg.1002 CDS ADOB02000011.1 43803 45860 3 + 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229905.peg.1003 CDS ADOB02000011.1 45938 47446 2 + 1509 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229905.peg.1004 CDS ADOB02000011.1 47625 48071 3 + 447 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229905.peg.1005 CDS ADOB02000011.1 48148 48786 1 + 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229905.peg.1006 CDS ADOB02000011.1 48980 48858 -2 - 123 hypothetical protein - none -
fig|6666666.229905.peg.1007 CDS ADOB02000011.1 49065 51872 3 + 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229905.peg.1008 CDS ADOB02000011.1 51998 53221 2 + 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229905.peg.1009 CDS ADOB02000011.1 53408 54577 2 + 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229905.peg.1010 CDS ADOB02000011.1 54588 55460 3 + 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229905.peg.1012 CDS ADOB02000011.1 57853 55631 -1 - 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229905.peg.1014 CDS ADOB02000011.1 58822 58361 -1 - 462 Hydrogenase 3 maturation protease (EC 3.4.-.-) - none -
fig|6666666.229905.peg.1015 CDS ADOB02000011.1 59216 58812 -2 - 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229905.peg.1016 CDS ADOB02000011.1 60127 59351 -1 - 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229905.peg.1017 CDS ADOB02000011.1 60771 60124 -3 - 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229905.peg.1018 CDS ADOB02000011.1 62515 60785 -1 - 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229905.peg.1019 CDS ADOB02000011.1 63707 62535 -2 - 1173 Hydrogenase-4 component F - none -
fig|6666666.229905.peg.1020 CDS ADOB02000011.1 64072 63884 -1 - 189 Hydrogenase-4 component F - none -
fig|6666666.229905.peg.1021 CDS ADOB02000011.1 64715 64077 -2 - 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229905.peg.1022 CDS ADOB02000011.1 66171 64726 -3 - 1446 Hydrogenase-4 component D - none -
fig|6666666.229905.peg.1023 CDS ADOB02000011.1 67146 66184 -3 - 963 Hydrogenase-4 component C - none -
fig|6666666.229905.peg.1024 CDS ADOB02000011.1 68779 67157 -1 - 1623 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229905.peg.1025 CDS ADOB02000011.1 69179 68751 -2 - 429 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229905.peg.1026 CDS ADOB02000011.1 69811 69212 -1 - 600 Hydrogenase-4 component A - none -
fig|6666666.229905.peg.1027 CDS ADOB02000011.1 70107 72392 3 + 2286 [NiFe] hydrogenase metallocenter assembly protein HypF NiFe hydrogenase maturation
fig|6666666.229905.peg.1028 CDS ADOB02000011.1 72863 72747 -2 - 117 hypothetical protein - none -
fig|6666666.229905.peg.1029 CDS ADOB02000011.1 73733 73020 -2 - 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229905.peg.1030 CDS ADOB02000011.1 74556 73726 -3 - 831 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229905.peg.1031 CDS ADOB02000011.1 77449 74654 -1 - 2796 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229905.peg.1032 CDS ADOB02000011.1 77678 77526 -2 - 153 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase;
Selenocysteine metabolism
fig|6666666.229905.peg.1033 CDS ADOB02000011.1 77986 78810 1 + 825 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229905.peg.1034 CDS ADOB02000011.1 78859 79857 1 + 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229905.peg.1035 CDS ADOB02000011.1 79808 79930 2 + 123 hypothetical protein - none -
fig|6666666.229905.peg.1036 CDS ADOB02000011.1 80445 79927 -3 - 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.229905.peg.1037 CDS ADOB02000011.1 80663 82012 2 + 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229905.peg.1038 CDS ADOB02000011.1 82180 84354 1 + 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229905.peg.1039 CDS ADOB02000011.1 85149 84487 -3 - 663 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229905.peg.1040 CDS ADOB02000011.1 86235 85492 -3 - 744 Probable transmembrane protein - none -
fig|6666666.229905.peg.1041 CDS ADOB02000011.1 86502 86248 -3 - 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229905.peg.1042 CDS ADOB02000011.1 86750 86499 -2 - 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229905.peg.1043 CDS ADOB02000012.1 1276 206 -1 - 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229905.peg.1044 CDS ADOB02000012.1 3545 1503 -2 - 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229905.peg.1045 CDS ADOB02000012.1 3978 4094 3 + 117 hypothetical protein - none -
fig|6666666.229905.peg.1046 CDS ADOB02000012.1 4526 4113 -2 - 414 transcriptional regulatory protein - none -
fig|6666666.229905.peg.1047 CDS ADOB02000012.1 5021 5272 2 + 252 possible DNA-binding protein - none -
fig|6666666.229905.peg.1048 CDS ADOB02000012.1 5287 7305 1 + 2019 transposase - none -
fig|6666666.229905.peg.1049 CDS ADOB02000012.1 7340 8260 2 + 921 Mu phage DNA transposition protein B - none -
fig|6666666.229905.peg.1050 CDS ADOB02000012.1 8257 8487 1 + 231 hypothetical protein - none -
fig|6666666.229905.peg.1051 CDS ADOB02000012.1 8503 9126 1 + 624 hypothetical protein - none -
fig|6666666.229905.peg.1052 CDS ADOB02000012.1 9137 9340 2 + 204 hypothetical protein - none -
fig|6666666.229905.peg.1053 CDS ADOB02000012.1 9343 9552 1 + 210 hypothetical protein - none -
fig|6666666.229905.peg.1054 CDS ADOB02000012.1 9684 9851 3 + 168 hypothetical protein - none -
fig|6666666.229905.peg.1055 CDS ADOB02000012.1 9848 10033 2 + 186 hypothetical protein - none -
fig|6666666.229905.peg.1056 CDS ADOB02000012.1 10030 10575 1 + 546 hypothetical protein - none -
fig|6666666.229905.peg.1057 CDS ADOB02000012.1 10579 10839 1 + 261 hypothetical protein - none -
fig|6666666.229905.peg.1058 CDS ADOB02000012.1 10857 11417 3 + 561 hypothetical protein - none -
fig|6666666.229905.peg.1059 CDS ADOB02000012.1 11421 12125 3 + 705 hypothetical protein - none -
fig|6666666.229905.peg.1060 CDS ADOB02000012.1 12122 12442 2 + 321 hypothetical protein - none -
fig|6666666.229905.peg.1061 CDS ADOB02000012.1 12768 13310 3 + 543 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229905.peg.1062 CDS ADOB02000012.1 13288 13749 1 + 462 hypothetical protein - none -
fig|6666666.229905.peg.1063 CDS ADOB02000012.1 13746 14165 3 + 420 Mu-like phage C protein, possible positive regulator of late transcription - none -
fig|6666666.229905.peg.1064 CDS ADOB02000012.1 14248 14793 1 + 546 Negative regulator of beta-lactamase expression Beta-lactamase
fig|6666666.229905.peg.1065 CDS ADOB02000012.1 15096 15329 3 + 234 FIG00696851: hypothetical protein - none -
fig|6666666.229905.peg.1066 CDS ADOB02000012.1 15322 15606 1 + 285 hypothetical protein - none -
fig|6666666.229905.peg.1067 CDS ADOB02000012.1 15569 15733 2 + 165 hypothetical protein - none -
fig|6666666.229905.peg.1068 CDS ADOB02000012.1 15726 15944 3 + 219 hypothetical protein - none -
fig|6666666.229905.peg.1069 CDS ADOB02000012.1 15941 16276 2 + 336 Mu-like phage gp25 - none -
fig|6666666.229905.peg.1070 CDS ADOB02000012.1 16280 16579 2 + 300 FIG00638990: hypothetical protein - none -
fig|6666666.229905.peg.1071 CDS ADOB02000012.1 16602 17177 3 + 576 Phage terminase small subunit Phage packaging machinery
fig|6666666.229905.peg.1072 CDS ADOB02000012.1 17177 18781 2 + 1605 FIG00698398: hypothetical protein - none -
fig|6666666.229905.peg.1073 CDS ADOB02000012.1 18791 20365 2 + 1575 Mu-like prophage FluMu protein gp29 - none -
fig|6666666.229905.peg.1074 CDS ADOB02000012.1 20373 21677 3 + 1305 Phage (Mu-like) virion morphogenesis protein - none -
fig|6666666.229905.peg.1075 CDS ADOB02000012.1 21812 22255 2 + 444 G protein - none -
fig|6666666.229905.peg.1076 CDS ADOB02000012.1 22455 23534 3 + 1080 Mu-like prophage FluMu I protein - none -
fig|6666666.229905.peg.1077 CDS ADOB02000012.1 23527 24453 1 + 927 Phage major capsid protein Phage capsid proteins
fig|6666666.229905.peg.1078 CDS ADOB02000012.1 24530 24961 2 + 432 hypothetical protein - none -
fig|6666666.229905.peg.1079 CDS ADOB02000012.1 24961 25368 1 + 408 Mu-like prophage protein GP36 - none -
fig|6666666.229905.peg.1080 CDS ADOB02000012.1 25368 25802 3 + 435 Mu-like prophage FluMu protein gp37 - none -
fig|6666666.229905.peg.1081 CDS ADOB02000012.1 25804 26001 1 + 198 hypothetical protein - none -
fig|6666666.229905.peg.1082 CDS ADOB02000012.1 25988 26734 2 + 747 Phage protein - none -
fig|6666666.229905.peg.1083 CDS ADOB02000012.1 26820 27245 3 + 426 hypothetical protein - none -
fig|6666666.229905.peg.1084 CDS ADOB02000012.1 27248 27433 2 + 186 hypothetical protein - none -
fig|6666666.229905.peg.1085 CDS ADOB02000012.1 27619 27449 -1 - 171 hypothetical protein - none -
fig|6666666.229905.peg.1086 CDS ADOB02000012.1 29955 29095 -3 - 861 hypothetical protein - none -
fig|6666666.229905.peg.1087 CDS ADOB02000013.1 526 113 -1 - 414 Putative lipoprotein yceB precursor - none -
fig|6666666.229905.peg.1088 CDS ADOB02000013.1 697 569 -1 - 129 hypothetical protein - none -
fig|6666666.229905.peg.1089 CDS ADOB02000013.1 899 1420 2 + 522 unknown - none -
fig|6666666.229905.peg.1090 CDS ADOB02000013.1 1441 2226 1 + 786 serine/threonine protein kinase - none -
fig|6666666.229905.peg.1091 CDS ADOB02000013.1 2223 2351 3 + 129 hypothetical protein - none -
fig|6666666.229905.peg.1092 CDS ADOB02000013.1 4467 2734 -3 - 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229905.peg.1093 CDS ADOB02000013.1 6230 4467 -2 - 1764 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229905.peg.1094 CDS ADOB02000013.1 7289 6336 -2 - 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229905.peg.1095 CDS ADOB02000013.1 8206 7349 -1 - 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229905.peg.1096 CDS ADOB02000013.1 9434 8616 -2 - 819 Aldose 1-epimerase - none -
fig|6666666.229905.peg.1097 CDS ADOB02000013.1 9510 11447 3 + 1938 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229905.peg.1098 CDS ADOB02000013.1 11450 12172 2 + 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.229905.peg.1099 CDS ADOB02000013.1 12205 12762 1 + 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229905.peg.1100 CDS ADOB02000013.1 12805 14481 1 + 1677 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229905.peg.1101 CDS ADOB02000013.1 14564 15721 2 + 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229905.peg.1102 CDS ADOB02000013.1 17191 15809 -1 - 1383 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229905.peg.1103 CDS ADOB02000013.1 18993 19814 3 + 822 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229905.peg.1104 CDS ADOB02000013.1 20336 21262 2 + 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229905.peg.1105 CDS ADOB02000013.1 21286 21732 1 + 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229905.peg.1106 CDS ADOB02000013.1 21741 22352 3 + 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229905.peg.1107 CDS ADOB02000013.1 22352 22915 2 + 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229905.peg.1108 CDS ADOB02000013.1 23908 22973 -1 - 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229905.peg.1109 CDS ADOB02000013.1 24022 25452 1 + 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229905.peg.1110 CDS ADOB02000013.1 25876 25496 -1 - 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229905.peg.1111 CDS ADOB02000013.1 27069 25873 -3 - 1197 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229905.peg.1112 CDS ADOB02000013.1 27575 27075 -2 - 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229905.peg.1113 CDS ADOB02000013.1 28045 28404 1 + 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229905.peg.1114 CDS ADOB02000013.1 28404 29096 3 + 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229905.peg.1115 CDS ADOB02000013.1 29098 30450 1 + 1353 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.229905.peg.1116 CDS ADOB02000013.1 30492 32435 3 + 1944 ABC transporter ATP-binding protein - none -
fig|6666666.229905.peg.1117 CDS ADOB02000013.1 32700 33698 3 + 999 FIG00781545: hypothetical protein - none -
fig|6666666.229905.peg.1118 CDS ADOB02000013.1 33928 34197 1 + 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229905.peg.1119 CDS ADOB02000013.1 34214 34351 2 + 138 FIG00732228: membrane protein - none -
fig|6666666.229905.peg.1120 CDS ADOB02000013.1 34360 35568 1 + 1209 FIG00732228: membrane protein - none -
fig|6666666.229905.peg.1121 CDS ADOB02000013.1 35578 36402 1 + 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229905.peg.1122 CDS ADOB02000013.1 36392 37336 2 + 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229905.peg.1123 CDS ADOB02000013.1 38453 37503 -2 - 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p - none -
fig|6666666.229905.peg.1124 CDS ADOB02000013.1 38516 39022 2 + 507 FIG001674: hypothetical protein - none -
fig|6666666.229905.peg.1125 CDS ADOB02000013.1 41160 39019 -3 - 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229905.peg.1126 CDS ADOB02000013.1 41642 41169 -2 - 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229905.peg.1127 CDS ADOB02000013.1 42100 41642 -1 - 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229905.peg.1128 CDS ADOB02000013.1 42837 42163 -3 - 675 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229905.peg.1129 CDS ADOB02000013.1 42982 43254 1 + 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229905.peg.1130 CDS ADOB02000013.1 44077 43229 -1 - 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229905.peg.1131 CDS ADOB02000013.1 44931 44074 -3 - 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229905.peg.1132 CDS ADOB02000013.1 45821 44931 -2 - 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229905.peg.1133 CDS ADOB02000013.1 46702 45821 -1 - 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229905.peg.1134 CDS ADOB02000013.1 47125 46796 -1 - 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) CBSS-326442.4.peg.1852;
Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229905.peg.1135 CDS ADOB02000013.1 47873 47211 -2 - 663 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229905.peg.1136 CDS ADOB02000013.1 48427 48606 1 + 180 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229905.peg.1137 CDS ADOB02000013.1 53319 51046 -3 - 2274 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229905.peg.1138 CDS ADOB02000013.1 53619 54551 3 + 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229905.peg.1139 CDS ADOB02000013.1 54556 54675 1 + 120 hypothetical protein - none -
fig|6666666.229905.peg.1140 CDS ADOB02000013.1 54672 55283 3 + 612 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229905.peg.1141 CDS ADOB02000013.1 55284 55616 3 + 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229905.peg.1142 CDS ADOB02000013.1 58457 55683 -2 - 2775 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229905.peg.1143 CDS ADOB02000013.1 60901 58535 -1 - 2367 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229905.peg.1144 CDS ADOB02000013.1 61194 62087 3 + 894 Membrane protein LAPB - none -
fig|6666666.229905.peg.1145 CDS ADOB02000013.1 62080 62757 1 + 678 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229905.peg.1146 CDS ADOB02000013.1 62855 64501 2 + 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229905.peg.1147 CDS ADOB02000013.1 64563 64850 3 + 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229905.peg.1148 CDS ADOB02000013.1 64949 65245 2 + 297 Inner membrane protein yciS - none -
fig|6666666.229905.peg.1149 CDS ADOB02000013.1 65245 66435 1 + 1191 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229905.peg.1150 CDS ADOB02000013.1 66465 67157 3 + 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229905.peg.1151 CDS ADOB02000013.1 67163 67480 2 + 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229905.peg.1152 CDS ADOB02000013.1 67864 67514 -1 - 351 FIG00782386: hypothetical protein - none -
fig|6666666.229905.peg.1153 CDS ADOB02000013.1 70595 67932 -2 - 2664 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229905.peg.1154 CDS ADOB02000013.1 71203 70763 -1 - 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229905.peg.1155 CDS ADOB02000013.1 71746 71222 -1 - 525 Flavodoxin 1 Flavodoxin
fig|6666666.229905.peg.1156 CDS ADOB02000013.1 72978 72178 -3 - 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229905.peg.1157 CDS ADOB02000013.1 73065 73682 3 + 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229905.peg.1158 CDS ADOB02000013.1 73688 75103 2 + 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229905.peg.1159 CDS ADOB02000013.1 75112 78435 1 + 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229905.peg.1160 CDS ADOB02000013.1 78457 79530 1 + 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229905.peg.1161 CDS ADOB02000013.1 79552 80424 1 + 873 Murein endopeptidase - none -
fig|6666666.229905.peg.1162 CDS ADOB02000013.1 80428 81195 1 + 768 Putative membrane protein YfcA - none -
fig|6666666.229905.peg.1163 CDS ADOB02000013.1 81311 82267 2 + 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229905.peg.1164 CDS ADOB02000013.1 82289 82900 2 + 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229905.peg.1165 CDS ADOB02000013.1 82933 84978 1 + 2046 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229905.peg.1166 CDS ADOB02000013.1 84981 85871 3 + 891 hypothetical protein - none -
fig|6666666.229905.peg.1167 CDS ADOB02000013.1 86197 86967 1 + 771 Glycosyltransferase - none -
fig|6666666.229905.peg.1168 CDS ADOB02000014.1 3406 1283 -1 - 2124 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229905.peg.1169 CDS ADOB02000014.1 3718 3452 -1 - 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229905.peg.1170 CDS ADOB02000014.1 4414 3776 -1 - 639 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229905.peg.1171 CDS ADOB02000014.1 4427 4576 2 + 150 hypothetical protein - none -
fig|6666666.229905.peg.1172 CDS ADOB02000014.1 4656 5660 3 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229905.peg.1173 CDS ADOB02000014.1 6170 5754 -2 - 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229905.peg.1174 CDS ADOB02000014.1 6243 6671 3 + 429 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229905.peg.1175 CDS ADOB02000014.1 6664 6957 1 + 294 UPF0125 protein yfjF - none -
fig|6666666.229905.peg.1176 CDS ADOB02000014.1 6990 8183 3 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229905.peg.1177 CDS ADOB02000014.1 8190 9524 3 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229905.peg.1178 CDS ADOB02000014.1 10384 9530 -1 - 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229905.peg.1179 CDS ADOB02000014.1 10933 10412 -1 - 522 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229905.peg.1180 CDS ADOB02000014.1 11662 10937 -1 - 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB Lipopolysaccharide assembly
fig|6666666.229905.peg.1181 CDS ADOB02000014.1 12186 11668 -3 - 519 LptA, protein essential for LPS transport across the periplasm Lipopolysaccharide assembly
fig|6666666.229905.peg.1182 CDS ADOB02000014.1 12742 12167 -1 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229905.peg.1183 CDS ADOB02000014.1 13026 13823 3 + 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229905.peg.1184 CDS ADOB02000014.1 13817 14602 2 + 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229905.peg.1185 CDS ADOB02000014.1 14625 15134 3 + 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229905.peg.1186 CDS ADOB02000014.1 15163 15804 1 + 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229905.peg.1187 CDS ADOB02000014.1 15808 16143 1 + 336 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229905.peg.1188 CDS ADOB02000014.1 16143 16400 3 + 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229905.peg.1189 CDS ADOB02000014.1 16417 17694 1 + 1278 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229905.peg.1190 CDS ADOB02000014.1 18046 17756 -1 - 291 FIG00696346: hypothetical protein - none -
fig|6666666.229905.peg.1191 CDS ADOB02000014.1 18249 19679 3 + 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229905.peg.1192 CDS ADOB02000014.1 19756 20295 1 + 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229905.peg.1193 CDS ADOB02000014.1 20292 20960 3 + 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229905.peg.1194 CDS ADOB02000014.1 21025 21750 1 + 726 Integral membrane protein TerC - none -
fig|6666666.229905.peg.1195 CDS ADOB02000014.1 23268 21859 -3 - 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229905.peg.1196 CDS ADOB02000014.1 23655 25508 3 + 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229905.peg.1197 CDS ADOB02000014.1 25733 28243 2 + 2511 TolA protein Ton and Tol transport systems
fig|6666666.229905.peg.1198 CDS ADOB02000014.1 28771 28307 -1 - 465 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229905.peg.1199 CDS ADOB02000014.1 28929 29822 3 + 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229905.peg.1200 CDS ADOB02000014.1 29935 30939 1 + 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229905.peg.1201 CDS ADOB02000014.1 31074 32585 3 + 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229905.peg.1202 CDS ADOB02000014.1 32900 33736 2 + 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229905.peg.1203 CDS ADOB02000014.1 34484 33789 -2 - 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229905.peg.1204 CDS ADOB02000014.1 35865 34477 -3 - 1389 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229905.peg.1205 CDS ADOB02000014.1 36004 36135 1 + 132 hypothetical protein - none -
fig|6666666.229905.peg.1206 CDS ADOB02000014.1 36224 38671 2 + 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229905.peg.1207 CDS ADOB02000014.1 38684 39628 2 + 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229905.peg.1208 CDS ADOB02000014.1 39656 40096 2 + 441 hypothetical protein - none -
fig|6666666.229905.peg.1209 CDS ADOB02000014.1 40152 41426 3 + 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229905.peg.1210 CDS ADOB02000014.1 41485 42204 1 + 720 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229905.peg.1211 CDS ADOB02000014.1 42300 43553 3 + 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229905.peg.1212 CDS ADOB02000014.1 43553 44440 2 + 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229905.peg.1213 CDS ADOB02000014.1 44728 44573 -1 - 156 hypothetical protein - none -
fig|6666666.229905.peg.1214 CDS ADOB02000014.1 44730 45059 3 + 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229905.peg.1215 CDS ADOB02000014.1 45085 45765 1 + 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229905.peg.1216 CDS ADOB02000014.1 45804 46127 3 + 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229905.peg.1217 CDS ADOB02000014.1 46127 47296 2 + 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229905.peg.1218 CDS ADOB02000014.1 47395 48051 1 + 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229905.peg.1219 CDS ADOB02000014.1 48071 49303 2 + 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229905.peg.1220 CDS ADOB02000014.1 49312 49431 1 + 120 hypothetical protein - none -
fig|6666666.229905.peg.1221 CDS ADOB02000014.1 49613 50659 2 + 1047 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229905.peg.1222 CDS ADOB02000014.1 50849 51832 2 + 984 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229905.peg.1223 CDS ADOB02000014.1 51856 54231 1 + 2376 Alpha-glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization
fig|6666666.229905.peg.1224 CDS ADOB02000014.1 54246 55001 3 + 756 Hexuronate utilization operon transcriptional repressor ExuR - none -
fig|6666666.229905.peg.1225 CDS ADOB02000014.1 55021 56205 1 + 1185 Mannonate dehydratase (EC 4.2.1.8) - none -
fig|6666666.229905.peg.1226 CDS ADOB02000014.1 56243 56800 2 + 558 hypothetical protein - none -
fig|6666666.229905.peg.1227 CDS ADOB02000014.1 56850 57173 3 + 324 hypothetical protein - none -
fig|6666666.229905.peg.1228 CDS ADOB02000014.1 57230 58120 2 + 891 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229905.peg.1229 CDS ADOB02000014.1 59900 58146 -2 - 1755 Putative sulfate permease - none -
fig|6666666.229905.peg.1230 CDS ADOB02000014.1 60331 62748 1 + 2418 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229905.peg.1231 CDS ADOB02000014.1 64660 62810 -1 - 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229905.peg.1232 CDS ADOB02000014.1 66493 64736 -1 - 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229905.peg.1233 CDS ADOB02000014.1 66830 66615 -2 - 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229905.peg.1234 CDS ADOB02000014.1 66865 67032 1 + 168 hypothetical protein - none -
fig|6666666.229905.peg.1235 CDS ADOB02000014.1 67055 68083 2 + 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.229905.peg.1236 CDS ADOB02000014.1 68148 68381 3 + 234 unknown - none -
fig|6666666.229905.peg.1237 CDS ADOB02000014.1 68384 68962 2 + 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229905.peg.1238 CDS ADOB02000014.1 71042 69030 -2 - 2013 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229905.peg.1239 CDS ADOB02000014.1 72181 71144 -1 - 1038 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229905.peg.1240 CDS ADOB02000014.1 72321 73145 3 + 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229905.peg.1241 CDS ADOB02000014.1 73246 74193 1 + 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229905.peg.1242 CDS ADOB02000014.1 74271 74158 -3 - 114 hypothetical protein - none -
fig|6666666.229905.peg.1243 CDS ADOB02000014.1 74559 74413 -3 - 147 hypothetical protein - none -
fig|6666666.229905.peg.1244 CDS ADOB02000014.1 75216 74635 -3 - 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229905.peg.1245 CDS ADOB02000014.1 76616 75525 -2 - 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229905.peg.1246 CDS ADOB02000014.1 77488 76805 -1 - 684 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229905.peg.1247 CDS ADOB02000015.1 1296 1931 3 + 636 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229905.peg.1248 CDS ADOB02000015.1 2846 1998 -2 - 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229905.peg.1249 CDS ADOB02000015.1 3345 3031 -3 - 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229905.peg.1250 CDS ADOB02000015.1 4386 3361 -3 - 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229905.peg.1251 CDS ADOB02000015.1 6104 4401 -2 - 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229905.peg.1252 CDS ADOB02000015.1 6150 6314 3 + 165 hypothetical protein - none -
fig|6666666.229905.peg.1253 CDS ADOB02000015.1 6381 6665 3 + 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229905.peg.1254 CDS ADOB02000015.1 6699 9185 3 + 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229905.peg.1255 CDS ADOB02000015.1 9212 10072 2 + 861 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229905.peg.1256 CDS ADOB02000015.1 10072 10953 1 + 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229905.peg.1257 CDS ADOB02000015.1 10991 11440 2 + 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229905.peg.1258 CDS ADOB02000015.1 11454 12089 3 + 636 Cytochrome c-type protein NapC - none -
fig|6666666.229905.peg.1259 CDS ADOB02000015.1 14070 12175 -3 - 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229905.peg.1260 CDS ADOB02000015.1 15231 14188 -3 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229905.peg.1261 CDS ADOB02000015.1 16378 15251 -1 - 1128 Fic family protein - none -
fig|6666666.229905.peg.1262 CDS ADOB02000015.1 17474 16548 -2 - 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229905.peg.1263 CDS ADOB02000015.1 17496 17615 3 + 120 hypothetical protein - none -
fig|6666666.229905.peg.1264 CDS ADOB02000015.1 17753 18529 2 + 777 Protein HI0205 precursor - none -
fig|6666666.229905.peg.1265 CDS ADOB02000015.1 18556 20370 1 + 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229905.peg.1266 CDS ADOB02000015.1 20823 20476 -3 - 348 hypothetical protein - none -
fig|6666666.229905.peg.1267 CDS ADOB02000015.1 21039 20899 -3 - 141 hypothetical protein - none -
fig|6666666.229905.peg.1268 CDS ADOB02000015.1 21195 21073 -3 - 123 hypothetical protein - none -
fig|6666666.229905.peg.1269 CDS ADOB02000015.1 24011 21210 -2 - 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229905.peg.1270 CDS ADOB02000015.1 24228 24791 3 + 564 Outer membrane protein 18/16 - none -
fig|6666666.229905.peg.1271 CDS ADOB02000015.1 24895 25125 1 + 231 FIG00696102: hypothetical protein - none -
fig|6666666.229905.peg.1272 CDS ADOB02000015.1 25135 27150 1 + 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229905.peg.1273 CDS ADOB02000015.1 28046 27666 -2 - 381 FIG00782409: hypothetical protein - none -
fig|6666666.229905.peg.1274 CDS ADOB02000015.1 28175 28342 2 + 168 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229905.peg.1275 CDS ADOB02000015.1 28363 28776 1 + 414 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229905.peg.1276 CDS ADOB02000015.1 28776 29345 3 + 570 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229905.peg.1277 CDS ADOB02000015.1 29382 29867 3 + 486 Putative membrane protein - none -
fig|6666666.229905.peg.1278 CDS ADOB02000015.1 30080 30586 2 + 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229905.peg.1279 CDS ADOB02000015.1 30756 30908 3 + 153 hypothetical protein - none -
fig|6666666.229905.peg.1280 CDS ADOB02000015.1 31564 30905 -1 - 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229905.peg.1281 CDS ADOB02000015.1 31945 32634 1 + 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229905.peg.1282 CDS ADOB02000015.1 33407 32709 -2 - 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229905.peg.1283 CDS ADOB02000015.1 33519 33391 -3 - 129 hypothetical protein - none -
fig|6666666.229905.peg.1284 CDS ADOB02000015.1 33506 34837 2 + 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229905.peg.1285 CDS ADOB02000015.1 35308 36609 1 + 1302 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229905.peg.1286 CDS ADOB02000015.1 37039 38067 1 + 1029 USG protein - none -
fig|6666666.229905.peg.1287 CDS ADOB02000015.1 38580 39224 3 + 645 hypothetical protein - none -
fig|6666666.229905.peg.1288 CDS ADOB02000015.1 39944 39312 -2 - 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229905.peg.1289 CDS ADOB02000015.1 40115 41440 2 + 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229905.peg.1290 CDS ADOB02000015.1 41455 41595 1 + 141 hypothetical protein - none -
fig|6666666.229905.peg.1291 CDS ADOB02000015.1 41851 41558 -1 - 294 AagD - none -
fig|6666666.229905.peg.1292 CDS ADOB02000015.1 43089 41854 -3 - 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229905.peg.1293 CDS ADOB02000015.1 45014 43098 -2 - 1917 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229905.peg.1294 CDS ADOB02000015.1 47417 45030 -2 - 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229905.peg.1295 CDS ADOB02000015.1 47702 47559 -2 - 144 hypothetical protein - none -
fig|6666666.229905.peg.1296 CDS ADOB02000015.1 48439 47720 -1 - 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229905.peg.1297 CDS ADOB02000015.1 49815 48565 -3 - 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229905.peg.1298 CDS ADOB02000015.1 51282 50107 -3 - 1176 Cof protein - none -
fig|6666666.229905.peg.1299 CDS ADOB02000015.1 52228 51392 -1 - 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229905.peg.1300 CDS ADOB02000015.1 53039 52242 -2 - 798 PTS system, mannose-specific IIC component - none -
fig|6666666.229905.peg.1301 CDS ADOB02000015.1 54022 53057 -1 - 966 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229905.peg.1302 CDS ADOB02000015.1 54893 54309 -2 - 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229905.peg.1303 CDS ADOB02000015.1 54981 56342 3 + 1362 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229905.peg.1304 CDS ADOB02000015.1 56517 57521 3 + 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229905.peg.1305 CDS ADOB02000015.1 58252 57608 -1 - 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229905.peg.1306 CDS ADOB02000015.1 59705 58932 -2 - 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229905.peg.1307 CDS ADOB02000015.1 60308 59781 -2 - 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229905.peg.1308 CDS ADOB02000015.1 60470 61714 2 + 1245 Tryptophan-specific transport protein - none -
fig|6666666.229905.peg.1309 CDS ADOB02000015.1 61993 62127 1 + 135 hypothetical protein - none -
fig|6666666.229905.peg.1310 CDS ADOB02000015.1 62197 62310 1 + 114 hypothetical protein - none -
fig|6666666.229905.peg.1311 CDS ADOB02000015.1 63399 62692 -3 - 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229905.peg.1312 CDS ADOB02000015.1 63614 64141 2 + 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229905.peg.1313 CDS ADOB02000015.1 64162 65493 1 + 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229905.peg.1314 CDS ADOB02000015.1 65559 67142 3 + 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229905.peg.1315 CDS ADOB02000015.1 67241 67984 2 + 744 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229905.peg.1316 CDS ADOB02000015.1 68002 68496 1 + 495 Protein yfbU - none -
fig|6666666.229905.peg.1317 CDS ADOB02000015.1 69264 68581 -3 - 684 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229905.peg.1318 CDS ADOB02000015.1 69570 71228 3 + 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229905.peg.1319 CDS ADOB02000015.1 71479 72696 1 + 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229905.peg.1320 CDS ADOB02000015.1 72693 73520 3 + 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229905.peg.1321 CDS ADOB02000015.1 74236 73532 -1 - 705 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein CBSS-203122.12.peg.188;
CBSS-203122.12.peg.188
fig|6666666.229905.peg.1322 CDS ADOB02000015.1 74372 75034 2 + 663 FIGfam050825 CBSS-203122.12.peg.188
fig|6666666.229905.peg.1323 CDS ADOB02000015.1 75027 76946 3 + 1920 Mobile element protein - none -
fig|6666666.229905.peg.1324 CDS ADOB02000015.1 76946 77839 2 + 894 TniB NTP-binding protein CBSS-203122.12.peg.188
fig|6666666.229905.peg.1325 CDS ADOB02000015.1 77797 78915 1 + 1119 Mll9366 protein CBSS-203122.12.peg.188
fig|6666666.229905.peg.1326 CDS ADOB02000015.1 78912 80336 3 + 1425 FIGfam110555 CBSS-203122.12.peg.188
fig|6666666.229905.peg.1327 CDS ADOB02000015.1 80457 80669 3 + 213 hypothetical protein - none -
fig|6666666.229905.peg.1328 CDS ADOB02000015.1 80682 82322 3 + 1641 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229905.peg.1329 CDS ADOB02000015.1 82332 84953 3 + 2622 FIG00647261: hypothetical protein - none -
fig|6666666.229905.peg.1330 CDS ADOB02000015.1 85083 85559 3 + 477 hypothetical protein - none -
fig|6666666.229905.peg.1331 CDS ADOB02000015.1 86537 86325 -2 - 213 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229905.peg.1332 CDS ADOB02000015.1 87485 86697 -2 - 789 hypothetical protein - none -
fig|6666666.229905.peg.1333 CDS ADOB02000015.1 88674 87436 -3 - 1239 hypothetical protein - none -
fig|6666666.229905.peg.1334 CDS ADOB02000015.1 91529 88704 -2 - 2826 DNA helicase IV CBSS-83333.1.peg.946;
DNA repair, bacterial UvrD and related helicases
fig|6666666.229905.peg.1335 CDS ADOB02000015.1 92784 91786 -3 - 999 GTP pyrophosphokinase (EC 2.7.6.5) - none -
fig|6666666.229905.peg.1336 CDS ADOB02000015.1 93869 92781 -2 - 1089 hypothetical protein - none -
fig|6666666.229905.peg.1337 CDS ADOB02000015.1 95710 93878 -1 - 1833 hypothetical protein - none -
fig|6666666.229905.peg.1338 CDS ADOB02000015.1 95956 95813 -1 - 144 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein CBSS-203122.12.peg.188;
CBSS-203122.12.peg.188
fig|6666666.229905.peg.1339 CDS ADOB02000015.1 96668 95934 -2 - 735 MG(2+) CHELATASE FAMILY PROTEIN CBSS-203122.12.peg.188
fig|6666666.229905.peg.1340 CDS ADOB02000015.1 97397 96783 -2 - 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229905.peg.1341 CDS ADOB02000015.1 97407 97520 3 + 114 hypothetical protein - none -
fig|6666666.229905.peg.1342 CDS ADOB02000015.1 97530 98405 3 + 876 Membrane protein LAPB - none -
fig|6666666.229905.peg.1343 CDS ADOB02000015.1 98977 98501 -1 - 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) Biotin synthesis cluster;
RNA methylation
fig|6666666.229905.peg.1344 CDS ADOB02000015.1 99593 99096 -2 - 498 Phospholipid-binding protein - none -
fig|6666666.229905.peg.1345 CDS ADOB02000015.1 100541 99699 -2 - 843 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229905.peg.1346 CDS ADOB02000015.1 101253 100576 -3 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229905.peg.1347 CDS ADOB02000015.1 102280 101243 -1 - 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229905.peg.1348 CDS ADOB02000015.1 102477 103034 3 + 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229905.peg.1349 CDS ADOB02000016.1 65 838 2 + 774 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229905.peg.1350 CDS ADOB02000016.1 2018 882 -2 - 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229905.peg.1351 CDS ADOB02000016.1 2491 3642 1 + 1152 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229905.peg.1352 CDS ADOB02000016.1 3777 3917 3 + 141 hypothetical protein - none -
fig|6666666.229905.peg.1353 CDS ADOB02000016.1 3934 4233 1 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229905.peg.1354 CDS ADOB02000016.1 4297 6114 1 + 1818 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229905.peg.1355 CDS ADOB02000016.1 6131 7096 2 + 966 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229905.peg.1356 CDS ADOB02000016.1 7316 9943 2 + 2628 Iron siderophore receptor protein - none -
fig|6666666.229905.peg.1357 CDS ADOB02000016.1 10190 10014 -2 - 177 hypothetical protein - none -
fig|6666666.229905.peg.1358 CDS ADOB02000016.1 10293 12914 3 + 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229905.peg.1359 CDS ADOB02000016.1 13950 12997 -3 - 954 Inositol transport system permease protein - none -
fig|6666666.229905.peg.1360 CDS ADOB02000016.1 14089 14997 1 + 909 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) - none -
fig|6666666.229905.peg.1361 CDS ADOB02000016.1 15613 15101 -1 - 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229905.peg.1362 CDS ADOB02000016.1 16839 15691 -3 - 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229905.peg.1363 CDS ADOB02000016.1 18797 16917 -2 - 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229905.peg.1364 CDS ADOB02000016.1 20641 19208 -1 - 1434 Microcin H47 secretion protein - none -
fig|6666666.229905.peg.1365 CDS ADOB02000016.1 22779 20656 -3 - 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229905.peg.1366 CDS ADOB02000016.1 26015 22848 -2 - 3168 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229905.peg.1367 CDS ADOB02000016.1 26534 26028 -2 - 507 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229905.peg.1368 CDS ADOB02000016.1 28903 27641 -1 - 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.229905.peg.1369 CDS ADOB02000016.1 29580 29038 -3 - 543 hypothetical protein - none -
fig|6666666.229905.peg.1370 CDS ADOB02000016.1 30110 29961 -2 - 150 hypothetical protein - none -
fig|6666666.229905.peg.1371 CDS ADOB02000016.1 31201 30197 -1 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229905.peg.1372 CDS ADOB02000016.1 31257 31706 3 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229905.peg.1373 CDS ADOB02000016.1 31716 32159 3 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial
fig|6666666.229905.peg.1374 CDS ADOB02000016.1 35577 32161 -3 - 3417 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229905.peg.1375 CDS ADOB02000016.1 35891 35589 -2 - 303 FIG00696353: hypothetical protein - none -
fig|6666666.229905.peg.1376 CDS ADOB02000016.1 36561 35866 -3 - 696 FIG00696574: hypothetical protein - none -
fig|6666666.229905.peg.1377 CDS ADOB02000016.1 36949 36590 -1 - 360 Type II secretory pathway, component PulJ - none -
fig|6666666.229905.peg.1378 CDS ADOB02000016.1 37580 36963 -2 - 618 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229905.peg.1379 CDS ADOB02000016.1 38656 38189 -1 - 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229905.peg.1380 CDS ADOB02000016.1 39951 38671 -3 - 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229905.peg.1381 CDS ADOB02000016.1 41194 39986 -1 - 1209 TolA protein Ton and Tol transport systems
fig|6666666.229905.peg.1382 CDS ADOB02000016.1 41633 41211 -2 - 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229905.peg.1383 CDS ADOB02000016.1 42408 41719 -3 - 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229905.peg.1384 CDS ADOB02000016.1 42842 42438 -2 - 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229905.peg.1385 CDS ADOB02000016.1 44487 43351 -3 - 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229905.peg.1386 CDS ADOB02000016.1 45971 44502 -2 - 1470 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229905.peg.1387 CDS ADOB02000016.1 46519 46830 1 + 312 Chromosome segregation ATPases - none -
fig|6666666.229905.peg.1388 CDS ADOB02000016.1 47903 46884 -2 - 1020 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229905.peg.1389 CDS ADOB02000016.1 48526 47912 -1 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229905.peg.1390 CDS ADOB02000016.1 49162 48590 -1 - 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229905.peg.1391 CDS ADOB02000016.1 49628 49218 -2 - 411 excinuclease ABC subunit A - none -
fig|6666666.229905.peg.1392 CDS ADOB02000016.1 50380 49640 -1 - 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229905.peg.1393 CDS ADOB02000016.1 50785 50414 -1 - 372 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) Folate Biosynthesis
fig|6666666.229905.peg.1394 CDS ADOB02000016.1 52234 50966 -1 - 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229905.peg.1395 CDS ADOB02000016.1 52452 52592 3 + 141 hypothetical protein - none -
fig|6666666.229905.peg.1396 CDS ADOB02000016.1 54404 52626 -2 - 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229905.peg.1397 CDS ADOB02000016.1 54612 55139 3 + 528 membrane protein, putative - none -
fig|6666666.229905.peg.1398 CDS ADOB02000016.1 55211 55936 2 + 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229905.peg.1399 CDS ADOB02000016.1 56363 56223 -2 - 141 transposase - none -
fig|6666666.229905.peg.1400 CDS ADOB02000016.1 59109 56632 -3 - 2478 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229905.peg.1401 CDS ADOB02000016.1 59666 59334 -2 - 333 hypothetical protein - none -
fig|6666666.229905.peg.1402 CDS ADOB02000016.1 59894 60874 2 + 981 Mobile element protein - none -
fig|6666666.229905.peg.1403 CDS ADOB02000016.1 60874 61032 1 + 159 ATPase involved in DNA repair - none -
fig|6666666.229905.peg.1404 CDS ADOB02000016.1 64022 61455 -2 - 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229905.peg.1405 CDS ADOB02000016.1 65496 64165 -3 - 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229905.peg.1406 CDS ADOB02000016.1 65897 67849 2 + 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229905.peg.1407 CDS ADOB02000016.1 68008 68415 1 + 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229905.peg.1408 CDS ADOB02000016.1 68502 69155 3 + 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229905.peg.1409 CDS ADOB02000016.1 69507 70859 3 + 1353 Histidine permease YuiF - none -
fig|6666666.229905.peg.1410 CDS ADOB02000016.1 70923 71489 3 + 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229905.peg.1411 CDS ADOB02000016.1 72970 71546 -1 - 1425 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229905.peg.1412 CDS ADOB02000016.1 73078 73206 1 + 129 hypothetical protein - none -
fig|6666666.229905.peg.1413 CDS ADOB02000016.1 73314 73457 3 + 144 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) CBSS-87626.3.peg.3639;
Ubiquinone Biosynthesis
fig|6666666.229905.peg.1414 CDS ADOB02000016.1 74902 74171 -1 - 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229905.peg.1415 CDS ADOB02000016.1 75875 74904 -2 - 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229905.peg.1416 CDS ADOB02000016.1 76141 76452 1 + 312 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229905.peg.1417 CDS ADOB02000016.1 76473 76730 3 + 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229905.peg.1418 CDS ADOB02000016.1 76802 77725 2 + 924 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229905.peg.1419 CDS ADOB02000016.1 77803 78720 1 + 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229905.peg.1420 CDS ADOB02000016.1 78757 79932 1 + 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229905.peg.1421 CDS ADOB02000016.1 80048 79929 -2 - 120 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229905.peg.1422 CDS ADOB02000016.1 80482 80000 -1 - 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229905.peg.1423 CDS ADOB02000016.1 80827 80690 -1 - 138 hypothetical protein - none -
fig|6666666.229905.peg.1424 CDS ADOB02000016.1 80850 81698 3 + 849 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229905.peg.1425 CDS ADOB02000016.1 81775 82473 1 + 699 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229905.peg.1426 CDS ADOB02000016.1 82574 83494 2 + 921 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229905.peg.1427 CDS ADOB02000016.1 83504 84442 2 + 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229905.peg.1428 CDS ADOB02000016.1 84452 85435 2 + 984 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229905.peg.1429 CDS ADOB02000016.1 85432 86430 1 + 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229905.peg.1430 CDS ADOB02000016.1 87244 86537 -1 - 708 Aerobic respiration control protein arcA - none -
fig|6666666.229905.peg.1431 CDS ADOB02000016.1 87921 87655 -3 - 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229905.peg.1432 CDS ADOB02000016.1 88702 88133 -1 - 570 Lysine decarboxylase family - none -
fig|6666666.229905.peg.1433 CDS ADOB02000016.1 88845 90635 3 + 1791 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229905.peg.1434 CDS ADOB02000016.1 90737 90624 -2 - 114 hypothetical protein - none -
fig|6666666.229905.peg.1435 CDS ADOB02000016.1 90715 91104 1 + 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229905.peg.1436 CDS ADOB02000016.1 94384 91502 -1 - 2883 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229905.peg.1437 CDS ADOB02000016.1 94627 94749 1 + 123 hypothetical protein - none -
fig|6666666.229905.peg.1438 CDS ADOB02000016.1 94859 95818 2 + 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229905.peg.1439 CDS ADOB02000016.1 96232 96017 -1 - 216 Thioredoxin - none -
fig|6666666.229905.peg.1440 CDS ADOB02000016.1 97435 96440 -1 - 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229905.peg.1441 CDS ADOB02000016.1 98568 97459 -3 - 1110 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229905.peg.1442 CDS ADOB02000017.1 488 604 2 + 117 hypothetical protein - none -
fig|6666666.229905.peg.1443 CDS ADOB02000017.1 1748 1167 -2 - 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229905.peg.1444 CDS ADOB02000017.1 2767 1838 -1 - 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.1445 CDS ADOB02000017.1 3399 2767 -3 - 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.1446 CDS ADOB02000017.1 4018 3410 -1 - 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.1447 CDS ADOB02000017.1 5897 4029 -2 - 1869 Putative transport protein - none -
fig|6666666.229905.peg.1448 CDS ADOB02000017.1 6536 5937 -2 - 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229905.peg.1449 CDS ADOB02000017.1 7713 6529 -3 - 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) Llipid A biosynthesis cluster
fig|6666666.229905.peg.1450 CDS ADOB02000017.1 8586 7798 -3 - 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.229905.peg.1451 CDS ADOB02000017.1 9017 8607 -2 - 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229905.peg.1452 CDS ADOB02000017.1 10175 9153 -2 - 1023 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191) - none -
fig|6666666.229905.peg.1453 CDS ADOB02000017.1 10750 10175 -1 - 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229905.peg.1454 CDS ADOB02000017.1 13266 10855 -3 - 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229905.peg.1455 CDS ADOB02000017.1 14619 13285 -3 - 1335 Membrane-associated zinc metalloprotease - none -
fig|6666666.229905.peg.1456 CDS ADOB02000017.1 15497 14628 -2 - 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.1457 CDS ADOB02000017.1 16231 15512 -1 - 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229905.peg.1458 CDS ADOB02000017.1 17536 16253 -1 - 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229905.peg.1459 CDS ADOB02000017.1 18122 17565 -2 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229905.peg.1460 CDS ADOB02000017.1 18279 18136 -3 - 144 hypothetical protein - none -
fig|6666666.229905.peg.1461 CDS ADOB02000017.1 19060 18347 -1 - 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229905.peg.1462 CDS ADOB02000017.1 19118 19249 2 + 132 hypothetical protein - none -
fig|6666666.229905.peg.1463 CDS ADOB02000017.1 20875 19217 -1 - 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229905.peg.1464 CDS ADOB02000017.1 20999 22816 2 + 1818 ABC transporter ATP-binding protein - none -
fig|6666666.229905.peg.1465 CDS ADOB02000017.1 24503 23406 -2 - 1098 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229905.peg.1466 CDS ADOB02000017.1 25406 24540 -2 - 867 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229905.peg.1467 CDS ADOB02000018.1 752 177 -2 - 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229905.peg.1468 CDS ADOB02000018.1 940 1695 1 + 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229905.peg.1469 CDS ADOB02000018.1 2818 1742 -1 - 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229905.peg.1470 CDS ADOB02000018.1 3925 2822 -1 - 1104 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229905.peg.1471 CDS ADOB02000018.1 5294 3933 -2 - 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229905.peg.1472 CDS ADOB02000018.1 5712 5846 3 + 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.229905.peg.1473 CDS ADOB02000018.1 5892 6227 3 + 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229905.peg.1474 CDS ADOB02000018.1 6182 6445 2 + 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229905.peg.1475 CDS ADOB02000018.1 6487 8076 1 + 1590 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229905.peg.1476 CDS ADOB02000018.1 8204 9559 2 + 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229905.peg.1477 CDS ADOB02000018.1 10571 9663 -2 - 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.229905.peg.1478 CDS ADOB02000018.1 11248 10568 -1 - 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229905.peg.1479 CDS ADOB02000018.1 12277 11255 -1 - 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229905.peg.1480 CDS ADOB02000018.1 14084 12288 -2 - 1797 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229905.peg.1481 CDS ADOB02000018.1 14631 14248 -3 - 384 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229905.peg.1482 CDS ADOB02000018.1 14917 15585 1 + 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229905.peg.1483 CDS ADOB02000018.1 15607 16386 1 + 780 UPF0246 protein YaaA - none -
fig|6666666.229905.peg.1484 CDS ADOB02000018.1 16388 16954 2 + 567 FIG00696199: hypothetical protein - none -
fig|6666666.229905.peg.1485 CDS ADOB02000018.1 16954 17874 1 + 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229905.peg.1486 CDS ADOB02000018.1 17936 18901 2 + 966 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229905.peg.1487 CDS ADOB02000018.1 19498 19001 -1 - 498 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229905.peg.1488 CDS ADOB02000018.1 20178 19618 -3 - 561 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229905.peg.1489 CDS ADOB02000018.1 21226 20180 -1 - 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229905.peg.1490 CDS ADOB02000018.1 21581 21228 -2 - 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229905.peg.1491 CDS ADOB02000018.1 21932 21582 -2 - 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229905.peg.1492 CDS ADOB02000018.1 22245 23096 3 + 852 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229905.peg.1493 CDS ADOB02000018.1 23195 25507 2 + 2313 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229905.peg.1494 CDS ADOB02000018.1 25652 26392 2 + 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229905.peg.1495 CDS ADOB02000018.1 26534 27397 2 + 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229905.peg.1496 CDS ADOB02000018.1 28880 27468 -2 - 1413 Putative cell division protein precursor - none -
fig|6666666.229905.peg.1497 CDS ADOB02000018.1 29631 28888 -3 - 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.1498 CDS ADOB02000018.1 29742 30473 3 + 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) Llipid A biosynthesis cluster
fig|6666666.229905.peg.1499 CDS ADOB02000018.1 30466 30972 1 + 507 Arabinose efflux permease - none -
fig|6666666.229905.peg.1500 CDS ADOB02000018.1 31035 31712 3 + 678 YheO-like PAS domain - none -
fig|6666666.229905.peg.1501 CDS ADOB02000018.1 32992 31778 -1 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229905.peg.1502 CDS ADOB02000018.1 34530 33154 -3 - 1377 Tyrosine phenol-lyase (EC 4.1.99.2) - none -
fig|6666666.229905.peg.1503 CDS ADOB02000018.1 35381 34860 -2 - 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229905.peg.1504 CDS ADOB02000018.1 35446 36477 1 + 1032 Lysyl-lysine 2,3-aminomutase Translation elongation factor P lysylation
fig|6666666.229905.peg.1505 CDS ADOB02000018.1 36648 37961 3 + 1314 Cell envelope opacity-associated protein A - none -
fig|6666666.229905.peg.1506 CDS ADOB02000018.1 38023 38397 1 + 375 opacity associated protein - none -
fig|6666666.229905.peg.1507 CDS ADOB02000018.1 39393 38488 -3 - 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229905.peg.1508 CDS ADOB02000018.1 39456 39914 3 + 459 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229905.peg.1509 CDS ADOB02000018.1 39920 40159 2 + 240 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229905.peg.1510 CDS ADOB02000018.1 40159 41319 1 + 1161 Probable 3-phenylpropionic acid transporter - none -
fig|6666666.229905.peg.1511 CDS ADOB02000018.1 41322 42215 3 + 894 Tyrosine recombinase XerD - none -
fig|6666666.229905.peg.1512 CDS ADOB02000018.1 42379 43677 1 + 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229905.peg.1513 CDS ADOB02000018.1 45086 44142 -2 - 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229905.peg.1514 CDS ADOB02000018.1 45580 45086 -1 - 495 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229905.peg.1515 CDS ADOB02000018.1 48482 45660 -2 - 2823 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229905.peg.1516 CDS ADOB02000018.1 48684 48520 -3 - 165 FIG01055344: hypothetical protein - none -
fig|6666666.229905.peg.1517 CDS ADOB02000018.1 49824 48898 -3 - 927 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229905.peg.1518 CDS ADOB02000018.1 51479 49902 -2 - 1578 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229905.peg.1519 CDS ADOB02000018.1 51747 52010 3 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229905.peg.1520 CDS ADOB02000018.1 52044 52163 3 + 120 hypothetical protein - none -
fig|6666666.229905.peg.1521 CDS ADOB02000018.1 52797 52120 -3 - 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229905.peg.1522 CDS ADOB02000018.1 52873 53817 1 + 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229905.peg.1523 CDS ADOB02000018.1 53828 54319 2 + 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229905.peg.1524 CDS ADOB02000018.1 55211 54399 -2 - 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229905.peg.1525 CDS ADOB02000018.1 56358 55339 -3 - 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229905.peg.1526 CDS ADOB02000018.1 57228 56458 -3 - 771 HesA/MoeB/ThiF family protein related to EC-YgdL - none -
fig|6666666.229905.peg.1527 CDS ADOB02000018.1 58346 57228 -2 - 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229905.peg.1528 CDS ADOB02000018.1 60099 58726 -3 - 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229905.peg.1529 CDS ADOB02000018.1 60257 61264 2 + 1008 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229905.peg.1530 CDS ADOB02000018.1 62292 61528 -3 - 765 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229905.peg.1531 CDS ADOB02000018.1 62441 62307 -2 - 135 hypothetical protein - none -
fig|6666666.229905.peg.1532 CDS ADOB02000018.1 62428 62976 1 + 549 putative membrane protein - none -
fig|6666666.229905.peg.1533 CDS ADOB02000018.1 63606 63409 -3 - 198 hypothetical protein - none -
fig|6666666.229905.peg.1534 CDS ADOB02000020.1 13 1635 1 + 1623 oligopeptide transporter - none -
fig|6666666.229905.peg.1535 CDS ADOB02000020.1 1697 2125 2 + 429 hypothetical protein - none -
fig|6666666.229905.peg.1536 CDS ADOB02000020.1 2163 2972 3 + 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229905.peg.1537 CDS ADOB02000020.1 2995 4554 1 + 1560 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.229905.peg.1538 CDS ADOB02000020.1 4807 5505 1 + 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.229905.peg.1539 CDS ADOB02000020.1 5615 6043 2 + 429 FIG00848466: hypothetical protein - none -
fig|6666666.229905.peg.1540 CDS ADOB02000020.1 6185 6850 2 + 666 Aspartate racemase (EC 5.1.1.13) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229905.peg.1541 CDS ADOB02000020.1 6863 7117 2 + 255 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229905.peg.1542 CDS ADOB02000020.1 7197 7655 3 + 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229905.peg.1543 CDS ADOB02000020.1 8190 8044 -3 - 147 hypothetical protein - none -
fig|6666666.229905.peg.1544 CDS ADOB02000020.1 8211 9665 3 + 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229905.peg.1545 CDS ADOB02000020.1 11320 10076 -1 - 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1546 CDS ADOB02000020.1 12068 11340 -2 - 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1547 CDS ADOB02000020.1 12561 12118 -3 - 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1548 CDS ADOB02000020.1 13777 12554 -1 - 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1549 CDS ADOB02000020.1 14355 13786 -3 - 570 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1550 CDS ADOB02000020.1 16668 14395 -3 - 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1551 CDS ADOB02000020.1 17259 16675 -3 - 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1552 CDS ADOB02000020.1 17702 17256 -2 - 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1553 CDS ADOB02000020.1 18625 17699 -1 - 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1554 CDS ADOB02000020.1 19344 18622 -3 - 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1555 CDS ADOB02000020.1 20705 19344 -2 - 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1556 CDS ADOB02000020.1 21247 20702 -1 - 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1557 CDS ADOB02000020.1 22016 21273 -2 - 744 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1558 CDS ADOB02000021.1 682 32 -1 - 651 Mobile element protein - none -
fig|6666666.229905.peg.1559 CDS ADOB02000021.1 1008 835 -3 - 174 hypothetical protein - none -
fig|6666666.229905.peg.1560 CDS ADOB02000022.1 112 1791 1 + 1680 FIG00698772: hypothetical protein - none -
fig|6666666.229905.peg.1561 CDS ADOB02000022.1 1856 2665 2 + 810 Phage FAD/FMN-containing dehydrogenase - none -
fig|6666666.229905.peg.1562 CDS ADOB02000022.1 2677 2922 1 + 246 hypothetical protein - none -
fig|6666666.229905.peg.1563 CDS ADOB02000022.1 2926 3132 1 + 207 FIG00697022: hypothetical protein - none -
fig|6666666.229905.peg.1564 CDS ADOB02000023.1 751 287 -1 - 465 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229905.peg.1565 CDS ADOB02000024.1 2357 816 -2 - 1542 putative flippase - none -
fig|6666666.229905.peg.1566 CDS ADOB02000024.1 2488 3264 1 + 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229905.peg.1567 CDS ADOB02000024.1 3273 4466 3 + 1194 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229905.peg.1568 CDS ADOB02000024.1 4466 5347 2 + 882 Glycosyltransferase - none -
fig|6666666.229905.peg.1569 CDS ADOB02000024.1 5416 6225 1 + 810 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229905.peg.1570 CDS ADOB02000024.1 6227 7357 2 + 1131 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229905.peg.1571 CDS ADOB02000024.1 7428 8495 3 + 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229905.peg.1572 CDS ADOB02000024.1 8573 9445 2 + 873 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229905.peg.1573 CDS ADOB02000024.1 9447 10331 3 + 885 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229905.peg.1574 CDS ADOB02000024.1 10334 10876 2 + 543 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229905.peg.1575 CDS ADOB02000024.1 10888 11673 1 + 786 O-antigen export system permease protein RfbD - none -
fig|6666666.229905.peg.1576 CDS ADOB02000024.1 11772 12422 3 + 651 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) Rhamnose containing glycans
fig|6666666.229905.peg.1577 CDS ADOB02000024.1 12430 14328 1 + 1899 Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L- rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.229905.peg.1578 CDS ADOB02000024.1 14333 15145 2 + 813 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229905.peg.1579 CDS ADOB02000024.1 15149 16183 2 + 1035 Exopolysaccharide production protein ExoZ - none -
fig|6666666.229905.peg.1580 CDS ADOB02000024.1 16241 17113 2 + 873 Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.229905.peg.1581 CDS ADOB02000024.1 17123 18079 2 + 957 O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-) - none -
fig|6666666.229905.peg.1582 CDS ADOB02000024.1 18042 19460 3 + 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229905.peg.1583 CDS ADOB02000024.1 20001 20804 3 + 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229905.peg.1584 CDS ADOB02000024.1 20804 21598 2 + 795 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229905.peg.1585 CDS ADOB02000024.1 21623 22165 2 + 543 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229905.peg.1586 CDS ADOB02000024.1 22126 22650 1 + 525 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229905.peg.1587 CDS ADOB02000024.1 23552 22812 -2 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229905.peg.1588 CDS ADOB02000024.1 24484 23831 -1 - 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229905.peg.1589 CDS ADOB02000024.1 24573 25301 3 + 729 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229905.peg.1590 CDS ADOB02000026.1 50 805 2 + 756 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.229905.peg.1591 CDS ADOB02000026.1 1207 1070 -1 - 138 hypothetical protein - none -
fig|6666666.229905.peg.1592 CDS ADOB02000026.1 1472 1188 -2 - 285 hypothetical protein - none -
fig|6666666.229905.peg.1593 CDS ADOB02000026.1 2598 3755 3 + 1158 IncQ plasmid conjugative transfer DNA nicking endonuclease TraR (pTi VirD2 homolog) Conjugative transfer
fig|6666666.229905.peg.1594 CDS ADOB02000026.1 4515 4964 3 + 450 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229905.peg.1595 CDS ADOB02000026.1 5047 5622 1 + 576 Bores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1) - none -
fig|6666666.229905.peg.1596 CDS ADOB02000026.1 5649 5936 3 + 288 hypothetical protein - none -
fig|6666666.229905.peg.1597 CDS ADOB02000026.1 5949 8720 3 + 2772 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229905.peg.1598 CDS ADOB02000026.1 8731 9459 1 + 729 Minor pilin of type IV secretion complex, VirB5 - none -
fig|6666666.229905.peg.1599 CDS ADOB02000026.1 9481 9705 1 + 225 hypothetical protein - none -
fig|6666666.229905.peg.1600 CDS ADOB02000026.1 9717 10718 3 + 1002 Integral inner membrane protein of type IV secretion complex (VirB6) - none -
fig|6666666.229905.peg.1601 CDS ADOB02000026.1 10788 10931 3 + 144 hypothetical protein - none -
fig|6666666.229905.peg.1602 CDS ADOB02000026.1 10928 11617 2 + 690 Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB8 - none -
fig|6666666.229905.peg.1603 CDS ADOB02000026.1 11619 12476 3 + 858 Outer membrane and periplasm component of type IV secretion of T-DNA complex, has secretin-like domain, VirB9 - none -
fig|6666666.229905.peg.1604 CDS ADOB02000026.1 12486 13595 3 + 1110 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) - none -
fig|6666666.229905.peg.1605 CDS ADOB02000026.1 13608 14639 3 + 1032 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB11) - none -
fig|6666666.229905.peg.1606 CDS ADOB02000026.1 14642 16378 2 + 1737 Type IV secretion system protein VirD4 - none -
fig|6666666.229905.peg.1607 CDS ADOB02000026.1 16412 16849 2 + 438 hypothetical protein - none -
fig|6666666.229905.peg.1608 CDS ADOB02000026.1 17258 17476 2 + 219 hypothetical protein - none -
fig|6666666.229905.peg.1609 CDS ADOB02000026.1 18085 17801 -1 - 285 hypothetical protein - none -
fig|6666666.229905.peg.1610 CDS ADOB02000026.1 18249 18082 -3 - 168 hypothetical protein - none -
fig|6666666.229905.peg.1611 CDS ADOB02000026.1 18669 19310 3 + 642 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229905.peg.1612 CDS ADOB02000026.1 19303 19542 1 + 240 hypothetical protein - none -
fig|6666666.229905.peg.1613 CDS ADOB02000026.1 19595 19840 2 + 246 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229905.peg.1614 CDS ADOB02000026.1 20546 21553 2 + 1008 hypothetical protein - none -
fig|6666666.229905.peg.1615 CDS ADOB02000027.1 28 693 1 + 666 Phage tail length tape-measure protein 1 # Enterobacteria-related - none -
fig|6666666.229905.peg.1616 CDS ADOB02000027.1 701 1657 2 + 957 Phage protein - none -
fig|6666666.229905.peg.1617 CDS ADOB02000028.1 39 359 3 + 321 ABC transporter, solute-binding protein - none -
fig|6666666.229905.peg.1618 CDS ADOB02000028.1 359 1372 2 + 1014 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229905.peg.1619 CDS ADOB02000028.1 1369 2118 1 + 750 ABC transporter ATP-binding protein - none -
fig|6666666.229905.peg.1620 CDS ADOB02000028.1 2213 3073 2 + 861 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229905.peg.1621 CDS ADOB02000028.1 3101 4609 2 + 1509 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229905.peg.1622 CDS ADOB02000028.1 4937 4728 -2 - 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229905.peg.1623 CDS ADOB02000028.1 6053 5019 -2 - 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229905.peg.1624 CDS ADOB02000028.1 6860 6066 -2 - 795 Glutathione synthetase (EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229905.peg.1625 CDS ADOB02000028.1 7879 6860 -1 - 1020 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229905.peg.1626 CDS ADOB02000028.1 8029 7898 -1 - 132 hypothetical protein - none -
fig|6666666.229905.peg.1627 CDS ADOB02000028.1 9425 8007 -2 - 1419 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229905.peg.1628 CDS ADOB02000028.1 10572 9445 -3 - 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229905.peg.1629 CDS ADOB02000028.1 13318 10574 -1 - 2745 ABC-type multidrug transport system, permease component - none -
fig|6666666.229905.peg.1630 CDS ADOB02000028.1 14280 13321 -3 - 960 HlyD family secretion protein - none -
fig|6666666.229905.peg.1631 CDS ADOB02000028.1 14577 14401 -3 - 177 hypothetical protein - none -
fig|6666666.229905.peg.1632 CDS ADOB02000028.1 14631 15017 3 + 387 Transcriptional regulator, TetR family - none -
fig|6666666.229905.peg.1633 CDS ADOB02000028.1 16258 15068 -1 - 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229905.peg.1634 CDS ADOB02000028.1 16680 19289 3 + 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229905.peg.1635 CDS ADOB02000028.1 19362 20381 3 + 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229905.peg.1636 CDS ADOB02000028.1 20481 20897 3 + 417 COG0613, Predicted metal-dependent phosphoesterases (PHP family) tRNA modification Bacteria
fig|6666666.229905.peg.1637 CDS ADOB02000028.1 21135 23741 3 + 2607 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229905.peg.1638 CDS ADOB02000028.1 24662 23826 -2 - 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229905.peg.1639 CDS ADOB02000028.1 25721 24789 -2 - 933 Universal stress protein E Universal stress protein family
fig|6666666.229905.peg.1640 CDS ADOB02000028.1 26613 25840 -3 - 774 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229905.peg.1641 CDS ADOB02000028.1 26721 26891 3 + 171 hypothetical protein - none -
fig|6666666.229905.peg.1642 CDS ADOB02000028.1 27450 26953 -3 - 498 Ferritin-like protein 2 - none -
fig|6666666.229905.peg.1643 CDS ADOB02000028.1 27951 27466 -3 - 486 Ferritin-like protein 2 - none -
fig|6666666.229905.peg.1644 CDS ADOB02000028.1 29801 29190 -2 - 612 hypothetical protein - none -
fig|6666666.229905.peg.1645 CDS ADOB02000029.1 223 906 1 + 684 hypothetical protein - none -
fig|6666666.229905.peg.1646 CDS ADOB02000029.1 1329 976 -3 - 354 Bona fide RidA/YjgF/TdcF/RutC subgroup - none -
fig|6666666.229905.peg.1647 CDS ADOB02000029.1 1470 2147 3 + 678 FIG00904286: hypothetical protein - none -
fig|6666666.229905.peg.1648 CDS ADOB02000029.1 2153 2863 2 + 711 hypothetical protein - none -
fig|6666666.229905.peg.1649 CDS ADOB02000029.1 3525 2914 -3 - 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229905.peg.1650 CDS ADOB02000029.1 6064 3809 -1 - 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229905.peg.1651 CDS ADOB02000029.1 6248 6072 -2 - 177 hypothetical protein - none -
fig|6666666.229905.peg.1652 CDS ADOB02000029.1 8499 6601 -3 - 1899 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229905.peg.1653 CDS ADOB02000029.1 9002 9889 2 + 888 putative adhesin/invasin - none -
fig|6666666.229905.peg.1654 CDS ADOB02000029.1 11639 9993 -2 - 1647 ABC transporter ATP-binding protein - none -
fig|6666666.229905.peg.1655 CDS ADOB02000029.1 12042 12707 3 + 666 putative exported protein - none -
fig|6666666.229905.peg.1656 CDS ADOB02000029.1 12722 13753 2 + 1032 putative membrane protein - none -
fig|6666666.229905.peg.1657 CDS ADOB02000029.1 14734 14477 -1 - 258 hypothetical protein - none -
fig|6666666.229905.peg.1658 CDS ADOB02000029.1 15014 14808 -2 - 207 hypothetical protein - none -
fig|6666666.229905.peg.1659 CDS ADOB02000029.1 15284 15015 -2 - 270 hypothetical protein - none -
fig|6666666.229905.peg.1660 CDS ADOB02000029.1 16205 15516 -2 - 690 hypothetical protein - none -
fig|6666666.229905.peg.1661 CDS ADOB02000029.1 16490 16224 -2 - 267 hypothetical protein - none -
fig|6666666.229905.peg.1662 CDS ADOB02000029.1 17351 16656 -2 - 696 FIG00697497: hypothetical protein - none -
fig|6666666.229905.peg.1663 CDS ADOB02000030.1 702 172 -3 - 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229905.peg.1664 CDS ADOB02000030.1 2629 845 -1 - 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229905.peg.1665 CDS ADOB02000030.1 2776 3222 1 + 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229905.peg.1666 CDS ADOB02000030.1 3497 3288 -2 - 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229905.peg.1667 CDS ADOB02000030.1 3852 3688 -3 - 165 hypothetical protein - none -
fig|6666666.229905.peg.1668 CDS ADOB02000030.1 4619 3906 -2 - 714 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229905.peg.1669 CDS ADOB02000030.1 4930 4616 -1 - 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229905.peg.1670 CDS ADOB02000030.1 5037 5819 3 + 783 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229905.peg.1671 CDS ADOB02000030.1 5828 6667 2 + 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229905.peg.1672 CDS ADOB02000030.1 7965 6715 -3 - 1251 Phosphoglycerate transport system transcriptional regulatory protein PgtA Phosphoglycerate transport system
fig|6666666.229905.peg.1673 CDS ADOB02000030.1 9940 7958 -1 - 1983 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229905.peg.1674 CDS ADOB02000030.1 10923 9937 -3 - 987 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229905.peg.1675 CDS ADOB02000030.1 11561 12559 2 + 999 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229905.peg.1676 CDS ADOB02000030.1 12581 13378 2 + 798 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229905.peg.1677 CDS ADOB02000030.1 13384 14553 1 + 1170 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229905.peg.1678 CDS ADOB02000030.1 14575 15312 1 + 738 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229905.peg.1679 CDS ADOB02000030.1 17492 15654 -2 - 1839 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229905.peg.1680 CDS ADOB02000030.1 18228 17599 -3 - 630 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229905.peg.1681 CDS ADOB02000030.1 18515 18363 -2 - 153 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229905.peg.1682 CDS ADOB02000030.1 19232 18597 -2 - 636 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229905.peg.1683 CDS ADOB02000030.1 19682 19284 -2 - 399 DNA-binding protein H-NS - none -
fig|6666666.229905.peg.1684 CDS ADOB02000030.1 20123 21655 2 + 1533 Na+/H+ antiporter - none -
fig|6666666.229905.peg.1685 CDS ADOB02000031.1 4 258 1 + 255 Galactitol utilization operon repressor - none -
fig|6666666.229905.peg.1686 CDS ADOB02000031.1 2228 378 -2 - 1851 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229905.peg.1687 CDS ADOB02000031.1 3203 2313 -2 - 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229905.peg.1688 CDS ADOB02000031.1 3459 3214 -3 - 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229905.peg.1689 CDS ADOB02000031.1 3684 4580 3 + 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229905.peg.1690 CDS ADOB02000031.1 4603 5949 1 + 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229905.peg.1691 CDS ADOB02000031.1 6647 6006 -2 - 642 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229905.peg.1692 CDS ADOB02000031.1 8166 6709 -3 - 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.1693 CDS ADOB02000031.1 8959 8180 -1 - 780 Putative surface protein - none -
fig|6666666.229905.peg.1694 CDS ADOB02000031.1 9087 8971 -3 - 117 Putative surface protein - none -
fig|6666666.229905.peg.1695 CDS ADOB02000031.1 9218 9421 2 + 204 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229905.peg.1696 CDS ADOB02000031.1 9429 9896 3 + 468 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229905.peg.1697 CDS ADOB02000031.1 9941 10804 2 + 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229905.peg.1698 CDS ADOB02000031.1 10887 11210 3 + 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229905.peg.1699 CDS ADOB02000031.1 12957 11566 -3 - 1392 hypothetical protein - none -
fig|6666666.229905.peg.1700 CDS ADOB02000031.1 13524 13793 3 + 270 hypothetical protein - none -
fig|6666666.229905.peg.1701 CDS ADOB02000031.1 14420 15961 2 + 1542 Esterase/lipase - none -
fig|6666666.229905.peg.1702 CDS ADOB02000031.1 17607 16234 -3 - 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229905.peg.1703 CDS ADOB02000031.1 19618 17684 -1 - 1935 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) Multidrug Resistance Efflux Pumps
fig|6666666.229905.peg.1704 CDS ADOB02000031.1 20822 19638 -2 - 1185 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229905.peg.1705 CDS ADOB02000031.1 21023 22714 2 + 1692 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229905.peg.1706 CDS ADOB02000031.1 22786 23220 1 + 435 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229905.peg.1707 CDS ADOB02000031.1 23320 23880 1 + 561 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229905.peg.1708 CDS ADOB02000031.1 23877 26072 3 + 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229905.peg.1709 CDS ADOB02000031.1 26069 28078 2 + 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229905.peg.1710 CDS ADOB02000031.1 28105 29415 1 + 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229905.peg.1711 CDS ADOB02000031.1 29617 31056 1 + 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229905.peg.1712 CDS ADOB02000032.1 554 685 2 + 132 hypothetical protein - none -
fig|6666666.229905.peg.1713 CDS ADOB02000032.1 1692 937 -3 - 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229905.peg.1714 CDS ADOB02000032.1 2629 1754 -1 - 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229905.peg.1715 CDS ADOB02000032.1 2672 2986 2 + 315 Uncharacterized protein PM1437 - none -
fig|6666666.229905.peg.1716 CDS ADOB02000032.1 3281 2997 -2 - 285 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229905.peg.1717 CDS ADOB02000032.1 3883 3335 -1 - 549 FIG00903983: hypothetical protein - none -
fig|6666666.229905.peg.1718 CDS ADOB02000032.1 5762 4008 -2 - 1755 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229905.peg.1719 CDS ADOB02000032.1 5765 6313 2 + 549 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229905.peg.1720 CDS ADOB02000032.1 6318 6869 3 + 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229905.peg.1721 CDS ADOB02000032.1 6873 7673 3 + 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229905.peg.1722 CDS ADOB02000032.1 8549 7668 -2 - 882 Protein rarD - none -
fig|6666666.229905.peg.1723 CDS ADOB02000032.1 8767 8582 -1 - 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229905.peg.1724 CDS ADOB02000032.1 9408 9707 3 + 300 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229905.peg.1725 CDS ADOB02000032.1 9877 9993 1 + 117 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229905.peg.1726 CDS ADOB02000032.1 10172 10309 2 + 138 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229905.peg.1727 CDS ADOB02000032.1 10462 10932 1 + 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229905.peg.1728 CDS ADOB02000032.1 11047 13149 1 + 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229905.peg.1729 CDS ADOB02000033.1 56 751 2 + 696 FIG00697497: hypothetical protein - none -
fig|6666666.229905.peg.1730 CDS ADOB02000033.1 1081 791 -1 - 291 FIG00699498: hypothetical protein - none -
fig|6666666.229905.peg.1731 CDS ADOB02000033.1 1416 1700 3 + 285 hypothetical protein - none -
fig|6666666.229905.peg.1732 CDS ADOB02000033.1 2422 1973 -1 - 450 ImpA - none -
fig|6666666.229905.peg.1733 CDS ADOB02000033.1 2844 3098 3 + 255 hypothetical protein - none -
fig|6666666.229905.peg.1734 CDS ADOB02000033.1 3174 4256 3 + 1083 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229905.peg.1735 CDS ADOB02000033.1 4426 5253 1 + 828 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229905.peg.1736 CDS ADOB02000033.1 5282 6619 2 + 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229905.peg.1737 CDS ADOB02000033.1 6632 7099 2 + 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229905.peg.1738 CDS ADOB02000034.1 15 671 3 + 657 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229905.peg.1739 CDS ADOB02000034.1 685 1689 1 + 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229905.peg.1740 CDS ADOB02000034.1 1714 2811 1 + 1098 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229905.peg.1741 CDS ADOB02000034.1 2835 3713 3 + 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229905.peg.1742 CDS ADOB02000034.1 3746 4048 2 + 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229905.peg.1743 CDS ADOB02000034.1 5558 4152 -2 - 1407 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229905.peg.1744 CDS ADOB02000034.1 6833 5844 -2 - 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229905.peg.1745 CDS ADOB02000034.1 8649 6964 -3 - 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229905.peg.1746 CDS ADOB02000034.1 9731 8925 -2 - 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229905.peg.1747 CDS ADOB02000034.1 10927 9734 -1 - 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229905.peg.1748 CDS ADOB02000034.1 11704 10937 -1 - 768 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229905.peg.1749 CDS ADOB02000034.1 12110 12874 2 + 765 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229905.peg.1750 CDS ADOB02000034.1 16383 15079 -3 - 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229905.peg.1751 CDS ADOB02000034.1 18190 16394 -1 - 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229905.peg.1752 CDS ADOB02000034.1 18472 18206 -1 - 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229905.peg.1753 CDS ADOB02000034.1 18664 18506 -1 - 159 hypothetical protein - none -
fig|6666666.229905.peg.1754 CDS ADOB02000034.1 19762 19487 -1 - 276 [NiFe] hydrogenase metallocenter assembly protein HybG NiFe hydrogenase maturation
fig|6666666.229905.peg.1755 CDS ADOB02000034.1 20075 19911 -2 - 165 hypothetical protein - none -
fig|6666666.229905.peg.1756 CDS ADOB02000034.1 21644 20214 -2 - 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229905.peg.1757 CDS ADOB02000034.1 22570 21653 -1 - 918 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229905.peg.1758 CDS ADOB02000034.1 23059 22667 -1 - 393 putative - none -
fig|6666666.229905.peg.1759 CDS ADOB02000034.1 23722 23198 -1 - 525 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229905.peg.1760 CDS ADOB02000034.1 25280 23733 -2 - 1548 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229905.peg.1761 CDS ADOB02000034.1 26002 25448 -1 - 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) - none -
fig|6666666.229905.peg.1762 CDS ADOB02000034.1 26937 26002 -3 - 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) - none -
fig|6666666.229905.peg.1763 CDS ADOB02000034.1 27620 28495 2 + 876 Probable protease htpX homolog - none -
fig|6666666.229905.peg.1764 CDS ADOB02000034.1 28757 29746 2 + 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229905.peg.1765 CDS ADOB02000034.1 29766 32156 3 + 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229905.peg.1766 CDS ADOB02000034.1 32160 32456 3 + 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229905.peg.1767 CDS ADOB02000034.1 32508 32996 3 + 489 Probable lipoprotein nlpC precursor - none -
fig|6666666.229905.peg.1768 CDS ADOB02000034.1 33216 33091 -3 - 126 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Bacteria
fig|6666666.229905.peg.1769 CDS ADOB02000034.1 34055 33213 -2 - 843 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Bacteria
fig|6666666.229905.peg.1770 CDS ADOB02000034.1 34196 34612 2 + 417 putative membrane protein - none -
fig|6666666.229905.peg.1771 CDS ADOB02000034.1 36714 34702 -3 - 2013 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229905.peg.1772 CDS ADOB02000034.1 37105 36716 -1 - 390 FIG00697418: hypothetical protein - none -
fig|6666666.229905.peg.1773 CDS ADOB02000034.1 37266 37108 -3 - 159 FIG00697418: hypothetical protein - none -
fig|6666666.229905.peg.1774 CDS ADOB02000034.1 37640 37380 -2 - 261 hypothetical protein - none -
fig|6666666.229905.peg.1775 CDS ADOB02000035.1 622 233 -1 - 390 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.229905.peg.1776 CDS ADOB02000035.1 1653 664 -3 - 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229905.peg.1777 CDS ADOB02000035.1 2302 1682 -1 - 621 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229905.peg.1778 CDS ADOB02000035.1 2721 2332 -3 - 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229905.peg.1779 CDS ADOB02000035.1 3093 2737 -3 - 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229905.peg.1780 CDS ADOB02000035.1 3348 3235 -3 - 114 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.229905.peg.1781 CDS ADOB02000035.1 4699 3374 -1 - 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229905.peg.1782 CDS ADOB02000035.1 5137 4703 -1 - 435 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.229905.peg.1783 CDS ADOB02000035.1 5827 5327 -1 - 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229905.peg.1784 CDS ADOB02000035.1 6196 5843 -1 - 354 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.229905.peg.1785 CDS ADOB02000035.1 6743 6210 -2 - 534 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.229905.peg.1786 CDS ADOB02000035.1 7151 6759 -2 - 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229905.peg.1787 CDS ADOB02000035.1 7493 7188 -2 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229905.peg.1788 CDS ADOB02000035.1 7934 7506 -2 - 429 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.229905.peg.1789 CDS ADOB02000035.1 8374 8063 -1 - 312 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.229905.peg.1790 CDS ADOB02000035.1 8756 8385 -2 - 372 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.229905.peg.1791 CDS ADOB02000036.1 2231 1929 -2 - 303 Major pilus subunit of type IV secretion complex, VirB2 - none -
fig|6666666.229905.peg.1792 CDS ADOB02000037.1 1878 412 -3 - 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229905.peg.1793 CDS ADOB02000037.1 3258 2128 -3 - 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229905.peg.1794 CDS ADOB02000037.1 5247 3397 -3 - 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229905.peg.1795 CDS ADOB02000037.1 6297 5311 -3 - 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229905.peg.1796 CDS ADOB02000037.1 6833 7243 2 + 411 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229905.peg.1797 CDS ADOB02000037.1 7257 8144 3 + 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229905.peg.1798 CDS ADOB02000037.1 8154 9023 3 + 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229905.peg.1799 CDS ADOB02000037.1 9033 9911 3 + 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229905.peg.1800 CDS ADOB02000037.1 10066 10869 1 + 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229905.peg.1801 CDS ADOB02000037.1 10925 12070 2 + 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229905.peg.1802 CDS ADOB02000037.1 12775 12275 -1 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229905.peg.1803 CDS ADOB02000037.1 13880 12816 -2 - 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229905.peg.1804 CDS ADOB02000037.1 14295 13873 -3 - 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229905.peg.1805 CDS ADOB02000037.1 17358 14305 -3 - 3054 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229905.peg.1806 CDS ADOB02000037.1 17844 18884 3 + 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229905.peg.1807 CDS ADOB02000037.1 19226 19555 2 + 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229905.peg.1808 CDS ADOB02000037.1 19680 20132 3 + 453 putative membrane protein - none -
fig|6666666.229905.peg.1809 CDS ADOB02000037.1 20133 20522 3 + 390 COG2363 - none -
fig|6666666.229905.peg.1810 CDS ADOB02000037.1 20519 24430 2 + 3912 HrpA-like helicases - none -
fig|6666666.229905.peg.1811 CDS ADOB02000037.1 24738 25790 3 + 1053 putative inner membrane protein - none -
fig|6666666.229905.peg.1812 CDS ADOB02000037.1 25890 27038 3 + 1149 Mobile element protein - none -
fig|6666666.229905.peg.1813 CDS ADOB02000037.1 27066 27224 3 + 159 hypothetical protein - none -
fig|6666666.229905.peg.1814 CDS ADOB02000037.1 27895 27230 -1 - 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229905.peg.1815 CDS ADOB02000037.1 28534 28223 -1 - 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229905.peg.1816 CDS ADOB02000037.1 29032 28541 -1 - 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229905.peg.1817 CDS ADOB02000037.1 29693 29022 -2 - 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229905.peg.1818 CDS ADOB02000037.1 30834 29695 -3 - 1140 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229905.peg.1819 CDS ADOB02000037.1 32146 30821 -1 - 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229905.peg.1820 CDS ADOB02000037.1 33579 32149 -3 - 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229905.peg.1821 CDS ADOB02000037.1 34239 33718 -3 - 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229905.peg.1822 CDS ADOB02000037.1 36189 34282 -3 - 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229905.peg.1823 CDS ADOB02000037.1 38881 36488 -1 - 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229905.peg.1824 CDS ADOB02000037.1 39139 38927 -1 - 213 hypothetical protein - none -
fig|6666666.229905.peg.1825 CDS ADOB02000037.1 39482 39141 -2 - 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229905.peg.1826 CDS ADOB02000037.1 39616 40416 1 + 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229905.peg.1827 CDS ADOB02000037.1 40482 43073 3 + 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229905.peg.1828 CDS ADOB02000037.1 44432 43149 -2 - 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229905.peg.1829 CDS ADOB02000037.1 44561 45634 2 + 1074 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.229905.peg.1830 CDS ADOB02000038.1 67 1629 1 + 1563 FIG00696772: hypothetical protein - none -
fig|6666666.229905.peg.1831 CDS ADOB02000039.1 1803 169 -3 - 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229905.peg.1832 CDS ADOB02000039.1 1917 3332 3 + 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229905.peg.1833 CDS ADOB02000039.1 3481 3642 1 + 162 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Riboflavin synthesis cluster
fig|6666666.229905.peg.1834 CDS ADOB02000039.1 4413 3829 -3 - 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229905.peg.1835 CDS ADOB02000039.1 5216 4530 -2 - 687 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.229905.peg.1836 CDS ADOB02000039.1 5362 6174 1 + 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229905.peg.1837 CDS ADOB02000039.1 6358 7470 1 + 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229905.peg.1838 CDS ADOB02000039.1 8124 7543 -3 - 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229905.peg.1839 CDS ADOB02000039.1 8389 10959 1 + 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229905.peg.1840 CDS ADOB02000039.1 11088 10969 -3 - 120 hypothetical protein - none -
fig|6666666.229905.peg.1841 CDS ADOB02000039.1 11561 11061 -2 - 501 hypothetical protein - none -
fig|6666666.229905.peg.1842 CDS ADOB02000039.1 11744 12772 2 + 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229905.peg.1843 CDS ADOB02000039.1 12772 12951 1 + 180 hypothetical protein - none -
fig|6666666.229905.peg.1844 CDS ADOB02000039.1 13030 13854 1 + 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229905.peg.1845 CDS ADOB02000039.1 13864 14754 1 + 891 Tyrosine recombinase XerC - none -
fig|6666666.229905.peg.1846 CDS ADOB02000039.1 14768 15481 2 + 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229905.peg.1847 CDS ADOB02000039.1 16007 15582 -2 - 426 Excinuclease ATPase subunit - none -
fig|6666666.229905.peg.1848 CDS ADOB02000039.1 16035 16358 3 + 324 hypothetical protein - none -
fig|6666666.229905.peg.1849 CDS ADOB02000039.1 16388 17131 2 + 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1850 CDS ADOB02000039.1 17116 17904 1 + 789 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1851 CDS ADOB02000039.1 17882 18145 2 + 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1852 CDS ADOB02000039.1 18148 18399 1 + 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229905.peg.1853 CDS ADOB02000039.1 42076 42702 1 + 627 membrane protein ykgB - none -
fig|6666666.229905.peg.1854 CDS ADOB02000039.1 42773 43654 2 + 882 Transcriptional regulator, AraC family - none -
fig|6666666.229905.peg.1855 CDS ADOB02000039.1 44249 43659 -2 - 591 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229905.peg.1856 CDS ADOB02000039.1 44288 44947 2 + 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229905.peg.1857 CDS ADOB02000039.1 44960 45376 2 + 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229905.peg.1858 CDS ADOB02000039.1 45444 46316 3 + 873 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229905.peg.1859 CDS ADOB02000039.1 46719 46943 3 + 225 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229905.peg.1860 CDS ADOB02000039.1 46947 47609 3 + 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229905.peg.1861 CDS ADOB02000039.1 47647 48411 1 + 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229905.peg.1862 CDS ADOB02000039.1 48430 49452 1 + 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229905.peg.1863 CDS ADOB02000039.1 51745 49664 -1 - 2082 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229905.peg.1864 CDS ADOB02000039.1 52531 51827 -1 - 705 hypothetical protein - none -
fig|6666666.229905.peg.1865 CDS ADOB02000039.1 52912 52736 -1 - 177 hypothetical protein - none -
fig|6666666.229905.peg.1866 CDS ADOB02000039.1 53339 53079 -2 - 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229905.peg.1867 CDS ADOB02000039.1 54294 53389 -3 - 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229905.peg.1868 CDS ADOB02000039.1 54647 54486 -2 - 162 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229905.peg.1869 CDS ADOB02000039.1 55275 54661 -3 - 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229905.peg.1870 CDS ADOB02000039.1 56162 55323 -2 - 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.5.3) - none -
fig|6666666.229905.peg.1871 CDS ADOB02000039.1 56787 56164 -3 - 624 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3) - none -
fig|6666666.229905.peg.1872 CDS ADOB02000039.1 59218 56798 -1 - 2421 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229905.peg.1873 CDS ADOB02000039.1 59493 59353 -3 - 141 hypothetical protein - none -
fig|6666666.229905.peg.1874 CDS ADOB02000039.1 60343 60194 -1 - 150 hypothetical protein - none -
fig|6666666.229905.peg.1875 CDS ADOB02000039.1 60937 60800 -1 - 138 hypothetical protein - none -
fig|6666666.229905.peg.1876 CDS ADOB02000039.1 62869 62111 -1 - 759 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229905.peg.1877 CDS ADOB02000039.1 63325 62879 -1 - 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229905.peg.1878 CDS ADOB02000039.1 63799 63329 -1 - 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229905.peg.1879 CDS ADOB02000039.1 65236 63974 -1 - 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229905.peg.1880 CDS ADOB02000039.1 66105 65311 -3 - 795 FIG001154: CcsA-related protein - none -
fig|6666666.229905.peg.1881 CDS ADOB02000039.1 66259 67638 1 + 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229905.peg.1882 CDS ADOB02000039.1 68022 67789 -3 - 234 hypothetical protein - none -
fig|6666666.229905.peg.1883 CDS ADOB02000039.1 69089 68259 -2 - 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229905.peg.1884 CDS ADOB02000039.1 70228 69104 -1 - 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229905.peg.1885 CDS ADOB02000039.1 70367 70774 2 + 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229905.peg.1886 CDS ADOB02000039.1 71637 70888 -3 - 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229905.peg.1887 CDS ADOB02000039.1 73226 71859 -2 - 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229905.peg.1888 CDS ADOB02000039.1 73861 73250 -1 - 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229905.peg.1889 CDS ADOB02000039.1 73974 74384 3 + 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229905.peg.1890 CDS ADOB02000039.1 74545 75081 1 + 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229905.peg.1891 CDS ADOB02000039.1 75148 76080 1 + 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229905.peg.1892 CDS ADOB02000039.1 76159 77022 1 + 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229905.peg.1893 CDS ADOB02000039.1 77038 77865 1 + 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229905.peg.1894 CDS ADOB02000039.1 77953 78363 1 + 411 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229905.peg.1895 CDS ADOB02000039.1 78347 78640 2 + 294 Uncharacterized protein HI0073 - none -
fig|6666666.229905.peg.1896 CDS ADOB02000039.1 78668 79300 2 + 633 FIG00696423: hypothetical protein - none -
fig|6666666.229905.peg.1897 CDS ADOB02000039.1 79254 79379 3 + 126 hypothetical protein - none -
fig|6666666.229905.peg.1898 CDS ADOB02000039.1 79421 82009 2 + 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229905.peg.1899 CDS ADOB02000039.1 82162 82034 -1 - 129 hypothetical protein - none -
fig|6666666.229905.peg.1900 CDS ADOB02000039.1 82151 82654 2 + 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
Lipopolysaccharide assembly
fig|6666666.229905.peg.1901 CDS ADOB02000039.1 82654 83688 1 + 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229905.peg.1902 CDS ADOB02000039.1 84584 84180 -2 - 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229905.peg.1903 CDS ADOB02000039.1 87423 84661 -3 - 2763 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229905.peg.1904 CDS ADOB02000039.1 87750 87433 -3 - 318 hypothetical protein - none -
fig|6666666.229905.peg.1905 CDS ADOB02000039.1 87842 88153 2 + 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229905.peg.1906 CDS ADOB02000039.1 88223 88672 2 + 450 Mercuric resistance operon regulatory protein - none -
fig|6666666.229905.peg.1907 CDS ADOB02000039.1 91572 88741 -3 - 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229905.peg.1908 CDS ADOB02000039.1 91743 92222 3 + 480 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229905.peg.1909 CDS ADOB02000039.1 93182 92328 -2 - 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229905.peg.1910 CDS ADOB02000039.1 94273 93185 -1 - 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229905.peg.1911 CDS ADOB02000039.1 94824 94297 -3 - 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229905.peg.1912 CDS ADOB02000039.1 96447 95038 -3 - 1410 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229905.peg.1913 CDS ADOB02000039.1 96859 96467 -1 - 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229905.peg.1914 CDS ADOB02000039.1 97383 96859 -3 - 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229905.peg.1915 CDS ADOB02000039.1 97898 97380 -2 - 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229905.peg.1916 CDS ADOB02000039.1 98718 97909 -3 - 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229905.peg.1917 CDS ADOB02000039.1 98852 101419 2 + 2568 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229905.peg.1918 CDS ADOB02000039.1 101514 102359 3 + 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229905.peg.1919 CDS ADOB02000039.1 102454 103824 1 + 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229905.peg.1920 CDS ADOB02000039.1 104601 103957 -3 - 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229905.peg.1921 CDS ADOB02000039.1 104857 104639 -1 - 219 FIG00696234: hypothetical protein - none -
fig|6666666.229905.peg.1922 CDS ADOB02000039.1 105480 104881 -3 - 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229905.peg.1923 CDS ADOB02000039.1 105935 105480 -2 - 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229905.peg.1924 CDS ADOB02000039.1 107203 106004 -1 - 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229905.peg.1925 CDS ADOB02000039.1 107202 107330 3 + 129 hypothetical protein - none -
fig|6666666.229905.peg.1926 CDS ADOB02000039.1 107381 108040 2 + 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229905.peg.1927 CDS ADOB02000039.1 108312 108485 3 + 174 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.229905.peg.1928 CDS ADOB02000039.1 108497 108667 2 + 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229905.peg.1929 CDS ADOB02000039.1 108707 109564 2 + 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229905.peg.1930 CDS ADOB02000039.1 110619 109567 -3 - 1053 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229905.peg.1931 CDS ADOB02000039.1 111651 110629 -3 - 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229905.peg.1932 CDS ADOB02000039.1 112344 111652 -3 - 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229905.peg.1933 CDS ADOB02000039.1 112619 112407 -2 - 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229905.peg.1934 CDS ADOB02000039.1 112877 113725 2 + 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229905.peg.1935 CDS ADOB02000039.1 113734 114738 1 + 1005 putative capsular polysaccharide synthesis protein - none -
fig|6666666.229905.peg.1936 CDS ADOB02000039.1 115608 114745 -3 - 864 Involved in lipopolysaccharide biosynthesis - none -
fig|6666666.229905.peg.1937 CDS ADOB02000039.1 115793 118033 2 + 2241 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229905.peg.1938 CDS ADOB02000039.1 118057 118239 1 + 183 hypothetical protein - none -
fig|6666666.229905.peg.1939 CDS ADOB02000039.1 118834 118953 1 + 120 Cell division protein - none -
fig|6666666.229905.peg.1940 CDS ADOB02000039.1 119153 119719 2 + 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229905.peg.1941 CDS ADOB02000039.1 119745 120935 3 + 1191 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229905.peg.1942 CDS ADOB02000039.1 120949 124047 1 + 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229905.peg.1943 CDS ADOB02000039.1 124201 125001 1 + 801 Orf2 - none -
fig|6666666.229905.peg.1944 CDS ADOB02000039.1 125654 126601 2 + 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229905.peg.1945 CDS ADOB02000039.1 126617 127177 2 + 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229905.peg.1946 CDS ADOB02000039.1 127203 127496 3 + 294 COG1872 - none -
fig|6666666.229905.peg.1947 CDS ADOB02000039.1 127613 128272 2 + 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229905.peg.1948 CDS ADOB02000039.1 128337 130310 3 + 1974 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229905.peg.1949 CDS ADOB02000039.1 131217 130480 -3 - 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229905.peg.1950 CDS ADOB02000039.1 132193 131219 -1 - 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229905.peg.1951 CDS ADOB02000039.1 132300 133088 3 + 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229905.peg.1952 CDS ADOB02000039.1 133699 133124 -1 - 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229905.peg.1953 CDS ADOB02000039.1 134319 133993 -3 - 327 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229905.peg.1954 CDS ADOB02000039.1 134478 135026 3 + 549 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229905.peg.1955 CDS ADOB02000039.1 135056 136342 2 + 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229905.peg.1956 CDS ADOB02000039.1 136651 136496 -1 - 156 hypothetical protein - none -
fig|6666666.229905.peg.1957 CDS ADOB02000039.1 136837 137085 1 + 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229905.peg.1958 CDS ADOB02000039.1 137111 137638 2 + 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229905.peg.1959 CDS ADOB02000039.1 137704 138453 1 + 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229905.peg.1960 CDS ADOB02000039.1 138479 138829 2 + 351 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.229905.peg.1961 CDS ADOB02000039.1 139427 138939 -2 - 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229905.peg.1962 CDS ADOB02000039.1 140500 139427 -1 - 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229905.peg.1963 CDS ADOB02000039.1 141625 140570 -1 - 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229905.peg.1964 CDS ADOB02000039.1 141875 144280 2 + 2406 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229905.peg.1965 CDS ADOB02000039.1 144277 145014 1 + 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229905.peg.1966 CDS ADOB02000039.1 145347 146789 3 + 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229905.peg.1967 CDS ADOB02000039.1 147023 148105 2 + 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229905.peg.1968 CDS ADOB02000039.1 149280 148162 -3 - 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229905.peg.1969 CDS ADOB02000039.1 149949 149500 -3 - 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome LSU bacterial
fig|6666666.229905.peg.1970 CDS ADOB02000039.1 150195 149965 -3 - 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229905.peg.1971 CDS ADOB02000039.1 150534 150208 -3 - 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229905.peg.1972 CDS ADOB02000039.1 150898 150521 -1 - 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229905.peg.1973 CDS ADOB02000039.1 151673 151050 -2 - 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229905.peg.1974 CDS ADOB02000039.1 151881 154319 3 + 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.1975 CDS ADOB02000039.1 156204 154360 -3 - 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229905.peg.1976 CDS ADOB02000039.1 157209 156292 -3 - 918 transcriptional regulator MtrA - none -
fig|6666666.229905.peg.1977 CDS ADOB02000039.1 157313 157654 2 + 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229905.peg.1978 CDS ADOB02000039.1 158794 157751 -1 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229905.peg.1979 CDS ADOB02000039.1 158883 159608 3 + 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229905.peg.1980 CDS ADOB02000039.1 160151 159657 -2 - 495 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229905.peg.1981 CDS ADOB02000039.1 161435 160152 -2 - 1284 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] - none -
fig|6666666.229905.peg.1982 CDS ADOB02000039.1 161534 162295 2 + 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229905.peg.1983 CDS ADOB02000039.1 162568 162747 1 + 180 hypothetical protein - none -
fig|6666666.229905.peg.1984 CDS ADOB02000039.1 164161 162992 -1 - 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229905.peg.1985 CDS ADOB02000039.1 164369 164178 -2 - 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229905.peg.1986 CDS ADOB02000039.1 164959 164384 -1 - 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229905.peg.1987 CDS ADOB02000039.1 165727 164987 -1 - 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229905.peg.1988 CDS ADOB02000039.1 166770 165760 -3 - 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229905.peg.1989 CDS ADOB02000039.1 167246 166767 -2 - 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229905.peg.1990 CDS ADOB02000039.1 167938 167243 -1 - 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229905.peg.1991 CDS ADOB02000039.1 168216 167938 -3 - 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229905.peg.1992 CDS ADOB02000039.1 168368 169042 2 + 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229905.peg.1993 CDS ADOB02000039.1 169045 169719 1 + 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229905.peg.1994 CDS ADOB02000039.1 169962 170612 3 + 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229905.peg.1995 CDS ADOB02000039.1 170621 171556 2 + 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229905.peg.1996 CDS ADOB02000039.1 172106 171690 -2 - 417 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229905.peg.1997 CDS ADOB02000039.1 172564 172157 -1 - 408 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229905.peg.1998 CDS ADOB02000039.1 173522 172638 -2 - 885 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229905.peg.1999 CDS ADOB02000039.1 173809 174627 1 + 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229905.peg.2000 CDS ADOB02000039.1 175588 174665 -1 - 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229905.peg.2001 CDS ADOB02000039.1 176723 175581 -2 - 1143 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229905.peg.2002 CDS ADOB02000039.1 176757 176918 3 + 162 hypothetical protein - none -
fig|6666666.229905.peg.2003 CDS ADOB02000039.1 178010 176931 -2 - 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229905.peg.2004 CDS ADOB02000039.1 179238 178075 -3 - 1164 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.229905.peg.2005 CDS ADOB02000039.1 180046 179351 -1 - 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229905.peg.2006 CDS ADOB02000039.1 180153 180374 3 + 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229905.peg.2007 CDS ADOB02000039.1 181516 180440 -1 - 1077 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229905.peg.2008 CDS ADOB02000039.1 181702 183069 1 + 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229905.peg.2009 CDS ADOB02000040.1 1502 1179 -2 - 324 capsular polysaccharide biosynthesis protein, putative - none -
fig|6666666.229905.peg.2010 CDS ADOB02000040.1 2529 1558 -3 - 972 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229905.peg.2011 CDS ADOB02000040.1 2590 3069 1 + 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229905.peg.2012 CDS ADOB02000040.1 4772 3375 -2 - 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229905.peg.2013 CDS ADOB02000040.1 4799 5431 2 + 633 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229905.peg.2014 CDS ADOB02000040.1 5741 5445 -2 - 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229905.peg.2015 CDS ADOB02000040.1 6037 5726 -1 - 312 Phage-related protein - none -
fig|6666666.229905.peg.2016 CDS ADOB02000040.1 6205 6507 1 + 303 FIG004454: RNA binding protein - none -
fig|6666666.229905.peg.2017 CDS ADOB02000040.1 7058 6582 -2 - 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229905.peg.2018 CDS ADOB02000040.1 7219 8661 1 + 1443 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229905.peg.2019 CDS ADOB02000040.1 9416 8760 -2 - 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229905.peg.2020 CDS ADOB02000040.1 9545 10759 2 + 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229905.peg.2021 CDS ADOB02000040.1 10775 11506 2 + 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229905.peg.2022 CDS ADOB02000040.1 11812 11681 -1 - 132 hypothetical protein - none -
fig|6666666.229905.peg.2023 CDS ADOB02000040.1 12782 11883 -2 - 900 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229905.peg.2024 CDS ADOB02000040.1 14151 12868 -3 - 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229905.peg.2025 CDS ADOB02000040.1 15346 14228 -1 - 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229905.peg.2026 CDS ADOB02000040.1 15803 16993 2 + 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229905.peg.2027 CDS ADOB02000040.1 16962 17093 3 + 132 hypothetical protein - none -
fig|6666666.229905.peg.2028 CDS ADOB02000040.1 17117 18661 2 + 1545 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229905.peg.2029 CDS ADOB02000040.1 19630 21681 1 + 2052 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229905.peg.2030 CDS ADOB02000040.1 22778 21738 -2 - 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229905.peg.2031 CDS ADOB02000040.1 24792 22762 -3 - 2031 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229905.peg.2032 CDS ADOB02000040.1 25872 24844 -3 - 1029 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229905.peg.2033 CDS ADOB02000040.1 26005 25883 -1 - 123 hypothetical protein - none -
fig|6666666.229905.peg.2034 CDS ADOB02000040.1 26143 27615 1 + 1473 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229905.peg.2035 CDS ADOB02000040.1 27581 27709 2 + 129 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229905.peg.2036 CDS ADOB02000040.1 27918 30188 3 + 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229905.peg.2037 CDS ADOB02000040.1 31100 32230 2 + 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229905.peg.2038 CDS ADOB02000040.1 32252 32527 2 + 276 hypothetical protein - none -
fig|6666666.229905.peg.2039 CDS ADOB02000040.1 32595 32843 3 + 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229905.peg.2040 CDS ADOB02000040.1 32927 32796 -2 - 132 hypothetical protein - none -
fig|6666666.229905.peg.2041 CDS ADOB02000040.1 33767 32955 -2 - 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229905.peg.2042 CDS ADOB02000040.1 34409 33789 -2 - 621 L-lysine permease - none -
fig|6666666.229905.peg.2043 CDS ADOB02000040.1 34909 34418 -1 - 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229905.peg.2044 CDS ADOB02000040.1 35902 34919 -1 - 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229905.peg.2045 CDS ADOB02000040.1 36346 35921 -1 - 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229905.peg.2046 CDS ADOB02000040.1 36826 36353 -1 - 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229905.peg.2047 CDS ADOB02000040.1 38615 36966 -2 - 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229905.peg.2048 CDS ADOB02000040.1 39713 38631 -2 - 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229905.peg.2049 CDS ADOB02000040.1 41143 39737 -1 - 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229905.peg.2050 CDS ADOB02000040.1 41158 41280 1 + 123 hypothetical protein - none -
fig|6666666.229905.peg.2051 CDS ADOB02000040.1 42368 41289 -2 - 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229905.peg.2052 CDS ADOB02000040.1 43719 42469 -3 - 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229905.peg.2053 CDS ADOB02000040.1 44405 43719 -2 - 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229905.peg.2054 CDS ADOB02000040.1 45604 44420 -1 - 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229905.peg.2055 CDS ADOB02000040.1 47091 46147 -3 - 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229905.peg.2056 CDS ADOB02000040.1 47813 47247 -2 - 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229905.peg.2057 CDS ADOB02000040.1 47915 48889 2 + 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229905.peg.2058 CDS ADOB02000040.1 48892 49479 1 + 588 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229905.peg.2059 CDS ADOB02000040.1 51292 49754 -1 - 1539 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229905.peg.2060 CDS ADOB02000040.1 51713 51348 -2 - 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229905.peg.2061 CDS ADOB02000040.1 51855 53894 3 + 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229905.peg.2062 CDS ADOB02000040.1 54520 54020 -1 - 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229905.peg.2063 CDS ADOB02000040.1 56308 54581 -1 - 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229905.peg.2064 CDS ADOB02000040.1 56679 56422 -3 - 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229905.peg.2065 CDS ADOB02000040.1 57940 56900 -1 - 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229905.peg.2066 CDS ADOB02000040.1 58011 58559 3 + 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229905.peg.2067 CDS ADOB02000040.1 59078 60592 2 + 1515 Dca - none -
fig|6666666.229905.peg.2068 CDS ADOB02000040.1 60621 61238 3 + 618 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229905.peg.2069 CDS ADOB02000040.1 61225 62733 1 + 1509 conserved domain protein - none -
fig|6666666.229905.peg.2070 CDS ADOB02000040.1 62745 63653 3 + 909 RfbJ protein - none -
fig|6666666.229905.peg.2071 CDS ADOB02000040.1 64041 65834 3 + 1794 Mlr4739 protein - none -
fig|6666666.229905.peg.2072 CDS ADOB02000040.1 66033 65887 -3 - 147 hypothetical protein - none -
fig|6666666.229905.peg.2073 CDS ADOB02000040.1 66032 66484 2 + 453 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE
fig|6666666.229905.peg.2074 CDS ADOB02000040.1 66481 67968 1 + 1488 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229905.peg.2075 CDS ADOB02000040.1 67968 69818 3 + 1851 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229905.peg.2076 CDS ADOB02000040.1 69833 70777 2 + 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229905.peg.2077 CDS ADOB02000040.1 70896 71192 3 + 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229905.peg.2078 CDS ADOB02000040.1 71207 71356 2 + 150 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229905.peg.2079 CDS ADOB02000040.1 71441 71575 2 + 135 hypothetical protein - none -
fig|6666666.229905.peg.2080 CDS ADOB02000040.1 72531 71572 -3 - 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229905.peg.2081 CDS ADOB02000040.1 73694 72615 -2 - 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229905.peg.2082 CDS ADOB02000040.1 75122 73707 -2 - 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229905.peg.2083 CDS ADOB02000040.1 75387 77018 3 + 1632 Peptide transport periplasmic protein sapA (TC 3.A.1.5.5) - none -
fig|6666666.229905.peg.2084 CDS ADOB02000040.1 77018 77983 2 + 966 Peptide transport system permease protein SapB - none -
fig|6666666.229905.peg.2085 CDS ADOB02000040.1 77973 78860 3 + 888 Peptide transport system permease protein SapC - none -
fig|6666666.229905.peg.2086 CDS ADOB02000040.1 78868 79920 1 + 1053 Peptide transport system ATP-binding protein SapD - none -
fig|6666666.229905.peg.2087 CDS ADOB02000040.1 79924 80742 1 + 819 Peptide transport system ATP-binding protein SapF - none -
fig|6666666.229905.peg.2088 CDS ADOB02000041.1 126 710 3 + 585 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229905.peg.2089 CDS ADOB02000041.1 1252 1401 1 + 150 Integral membrane protein - none -
fig|6666666.229905.peg.2090 CDS ADOB02000041.1 1448 1645 2 + 198 hypothetical protein - none -
fig|6666666.229905.peg.2091 CDS ADOB02000041.1 2654 1617 -2 - 1038 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229905.peg.2092 CDS ADOB02000041.1 4254 2836 -3 - 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229905.peg.2093 CDS ADOB02000041.1 4484 4966 2 + 483 FxsA protein - none -
fig|6666666.229905.peg.2094 CDS ADOB02000041.1 5053 5343 1 + 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229905.peg.2095 CDS ADOB02000041.1 5464 7107 1 + 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229905.peg.2096 CDS ADOB02000041.1 8053 7196 -1 - 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.229905.peg.2097 CDS ADOB02000042.1 468 136 -3 - 333 Major pilus subunit of type IV secretion complex, VirB2 - none -
fig|6666666.229905.peg.2098 CDS ADOB02000042.1 1143 481 -3 - 663 Peptidoglycan hydrolase VirB1, involved in T-DNA transfer - none -
fig|6666666.229905.peg.2099 CDS ADOB02000042.1 1331 1143 -2 - 189 hypothetical protein - none -
fig|6666666.229905.peg.2100 CDS ADOB02000042.1 2641 1514 -1 - 1128 Replication initiator protein - none -
fig|6666666.229905.peg.2101 CDS ADOB02000042.1 2937 3062 3 + 126 hypothetical protein - none -
fig|6666666.229905.peg.2102 CDS ADOB02000042.1 4657 4208 -1 - 450 hypothetical protein - none -
fig|6666666.229905.peg.2103 CDS ADOB02000042.1 6840 4792 -3 - 2049 putative antirestriction protein - none -
fig|6666666.229905.peg.2104 CDS ADOB02000042.1 7058 6870 -2 - 189 hypothetical protein - none -
fig|6666666.229905.peg.2105 CDS ADOB02000042.1 8576 7122 -2 - 1455 DNA double-strand break repair Rad50 ATPase - none -
fig|6666666.229905.peg.2106 CDS ADOB02000042.1 9920 8601 -2 - 1320 hypothetical protein - none -
fig|6666666.229905.peg.2107 CDS ADOB02000042.1 10173 9931 -3 - 243 hypothetical protein - none -
fig|6666666.229905.peg.2108 CDS ADOB02000044.1 1586 357 -2 - 1230 Tyrosine-specific transport protein - none -
fig|6666666.229905.peg.2109 CDS ADOB02000044.1 2399 1716 -2 - 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229905.peg.2110 CDS ADOB02000044.1 3686 2415 -2 - 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229905.peg.2111 CDS ADOB02000044.1 4251 4006 -3 - 246 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229905.peg.2112 CDS ADOB02000044.1 4339 4494 1 + 156 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229905.peg.2113 CDS ADOB02000044.1 4488 4610 3 + 123 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229905.peg.2114 CDS ADOB02000044.1 4641 4856 3 + 216 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229905.peg.2115 CDS ADOB02000044.1 4875 6338 3 + 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229905.peg.2116 CDS ADOB02000044.1 6338 6850 2 + 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis;
Transport system clustering with HemG
fig|6666666.229905.peg.2117 CDS ADOB02000045.1 171 3095 3 + 2925 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229905.peg.2118 CDS ADOB02000045.1 3095 5074 2 + 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229905.peg.2119 CDS ADOB02000045.1 5087 5683 2 + 597 hypothetical protein - none -
fig|6666666.229905.peg.2120 CDS ADOB02000045.1 5927 6355 2 + 429 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.229905.peg.2121 CDS ADOB02000045.1 6372 6764 3 + 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229905.peg.2122 CDS ADOB02000045.1 6928 6809 -1 - 120 hypothetical protein - none -
fig|6666666.229905.peg.2123 CDS ADOB02000045.1 6927 7712 3 + 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229905.peg.2124 CDS ADOB02000045.1 8009 7725 -2 - 285 StbE replicon stabilization toxin - none -
fig|6666666.229905.peg.2125 CDS ADOB02000045.1 8260 8006 -1 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229905.peg.2126 CDS ADOB02000045.1 9934 8477 -1 - 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229905.peg.2127 CDS ADOB02000045.1 10164 10943 3 + 780 Protein of unknown function DUF419 - none -
fig|6666666.229905.peg.2128 CDS ADOB02000045.1 13481 11001 -2 - 2481 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229905.peg.2129 CDS ADOB02000045.1 14642 13542 -2 - 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229905.peg.2130 CDS ADOB02000045.1 14948 16405 2 + 1458 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis;
tRNA modification Bacteria;
tRNA modification Bacteria
fig|6666666.229905.peg.2131 CDS ADOB02000045.1 17193 16489 -3 - 705 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229905.peg.2132 CDS ADOB02000045.1 17376 18368 3 + 993 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229905.peg.2133 CDS ADOB02000045.1 19083 18433 -3 - 651 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229905.peg.2134 CDS ADOB02000046.1 474 1487 3 + 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229905.peg.2135 CDS ADOB02000046.1 1500 2021 3 + 522 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229905.peg.2136 CDS ADOB02000046.1 2021 2269 2 + 249 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229905.peg.2137 CDS ADOB02000046.1 2270 2725 2 + 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229905.peg.2138 CDS ADOB02000046.1 2925 3566 3 + 642 Stringent starvation protein A Carbon Starvation
fig|6666666.229905.peg.2139 CDS ADOB02000046.1 3578 4039 2 + 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229905.peg.2140 CDS ADOB02000046.1 5605 4202 -1 - 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.229905.peg.2141 CDS ADOB02000046.1 5801 7030 2 + 1230 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229905.peg.2142 CDS ADOB02000046.1 7107 7835 3 + 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229905.peg.2143 CDS ADOB02000046.1 8564 7923 -2 - 642 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229905.peg.2144 CDS ADOB02000046.1 10455 9502 -3 - 954 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229905.peg.2145 CDS ADOB02000046.1 10711 12228 1 + 1518 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229905.peg.2146 CDS ADOB02000047.1 1184 42 -2 - 1143 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229905.peg.2147 CDS ADOB02000048.1 257 484 2 + 228 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229905.peg.2148 CDS ADOB02000048.1 691 807 1 + 117 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229905.peg.2149 CDS ADOB02000048.1 1591 1451 -1 - 141 hypothetical protein - none -
fig|6666666.229905.peg.2150 CDS ADOB02000049.1 415 158 -1 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229905.peg.2151 CDS ADOB02000049.1 606 415 -3 - 192 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.229905.peg.2152 CDS ADOB02000049.1 1016 606 -2 - 411 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.229905.peg.2153 CDS ADOB02000049.1 1737 1030 -3 - 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229905.peg.2154 CDS ADOB02000049.1 2086 1754 -1 - 333 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.229905.peg.2155 CDS ADOB02000049.1 2243 2097 -2 - 147 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229905.peg.2156 CDS ADOB02000049.1 3219 2398 -3 - 822 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.229905.peg.2157 CDS ADOB02000049.1 3542 3240 -2 - 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.229905.peg.2158 CDS ADOB02000049.1 4141 3539 -1 - 603 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.229905.peg.2159 CDS ADOB02000049.1 4783 4157 -1 - 627 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.229905.peg.2160 CDS ADOB02000049.1 5111 4800 -2 - 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229905.peg.2161 CDS ADOB02000049.1 6259 5363 -1 - 897 Transcriptional regulators, LysR family - none -
fig|6666666.229905.peg.2162 CDS ADOB02000049.1 6597 7187 3 + 591 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229905.peg.2163 CDS ADOB02000049.1 7199 7864 2 + 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229905.peg.2164 CDS ADOB02000049.1 7867 9210 1 + 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229905.peg.2165 CDS ADOB02000049.1 9228 10409 3 + 1182 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.229905.peg.2166 CDS ADOB02000049.1 10974 10507 -3 - 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229905.peg.2167 CDS ADOB02000049.1 12450 11065 -3 - 1386 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229905.peg.2168 CDS ADOB02000049.1 13643 12711 -2 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229905.peg.2169 CDS ADOB02000049.1 14657 13653 -2 - 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229905.peg.2170 CDS ADOB02000049.1 16233 16877 3 + 645 tRNA dihydrouridine synthase A - none -
fig|6666666.229905.peg.2171 CDS ADOB02000049.1 17925 16933 -3 - 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229905.peg.2172 CDS ADOB02000049.1 18091 18543 1 + 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229905.peg.2173 CDS ADOB02000049.1 18577 19335 1 + 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229905.peg.2174 CDS ADOB02000049.1 20533 19472 -1 - 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229905.peg.2175 CDS ADOB02000049.1 20607 20957 3 + 351 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229905.peg.2176 CDS ADOB02000049.1 21423 21061 -3 - 363 FIG00696564: hypothetical protein - none -
fig|6666666.229905.peg.2177 CDS ADOB02000049.1 21658 21374 -1 - 285 hypothetical protein - none -
fig|6666666.229905.peg.2178 CDS ADOB02000049.1 21856 23187 1 + 1332 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229905.peg.2179 CDS ADOB02000049.1 23312 23716 2 + 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229905.peg.2180 CDS ADOB02000049.1 23843 24061 2 + 219 hypothetical protein - none -
fig|6666666.229905.peg.2181 CDS ADOB02000049.1 24741 24145 -3 - 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229905.peg.2182 CDS ADOB02000049.1 25555 24836 -1 - 720 probable periplasmic protein NMA1059 - none -
fig|6666666.229905.peg.2183 CDS ADOB02000049.1 26040 25606 -3 - 435 Ribonuclease E inhibitor RraB RNA processing and degradation, bacterial
fig|6666666.229905.peg.2184 CDS ADOB02000049.1 26530 26135 -1 - 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229905.peg.2185 CDS ADOB02000049.1 28016 26640 -2 - 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229905.peg.2186 CDS ADOB02000049.1 29395 28040 -1 - 1356 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.229905.peg.2187 CDS ADOB02000049.1 30351 29395 -3 - 957 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229905.peg.2188 CDS ADOB02000049.1 30929 30417 -2 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229905.peg.2189 CDS ADOB02000050.1 943 587 -1 - 357 DsrE-related protein - none -
fig|6666666.229905.peg.2190 CDS ADOB02000051.1 980 153 -2 - 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229905.peg.2191 CDS ADOB02000051.1 1508 1011 -2 - 498 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229905.peg.2192 CDS ADOB02000051.1 2307 1501 -3 - 807 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229905.rna.1 RNA ADOB02000002.1 374 284 -2 - 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229905.rna.2 RNA ADOB02000003.1 18470 18542 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229905.rna.3 RNA ADOB02000003.1 18547 18630 1 + 84 tRNA-Leu-TAA - none -
fig|6666666.229905.rna.4 RNA ADOB02000003.1 18686 18758 2 + 73 tRNA-Lys-TTT - none -
fig|6666666.229905.rna.5 RNA ADOB02000003.1 75499 75416 -1 - 84 tRNA-Leu-CAG tRNAs
fig|6666666.229905.rna.6 RNA ADOB02000003.1 105230 105148 -2 - 83 tRNA-Leu-GAG tRNAs
fig|6666666.229905.rna.7 RNA ADOB02000003.1 177294 177367 3 + 74 tRNA-Met-CAT - none -
fig|6666666.229905.rna.8 RNA ADOB02000003.1 206272 206344 1 + 73 tRNA-Thr-TGT - none -
fig|6666666.229905.rna.9 RNA ADOB02000003.1 206378 206459 2 + 82 tRNA-Tyr-GTA - none -
fig|6666666.229905.rna.10 RNA ADOB02000003.1 206503 206574 1 + 72 tRNA-Gly-TCC - none -
fig|6666666.229905.rna.11 RNA ADOB02000003.1 206581 206653 1 + 73 tRNA-Thr-GGT - none -
fig|6666666.229905.rna.12 RNA ADOB02000005.1 98049 97977 -3 - 73 tRNA-Val-TAC - none -
fig|6666666.229905.rna.13 RNA ADOB02000005.1 98152 98080 -1 - 73 tRNA-Val-TAC - none -
fig|6666666.229905.rna.14 RNA ADOB02000005.1 98266 98194 -1 - 73 tRNA-Val-TAC - none -
fig|6666666.229905.rna.15 RNA ADOB02000005.1 100076 100148 2 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.229905.rna.16 RNA ADOB02000009.1 137837 137910 2 + 74 tRNA-Met-CAT - none -
fig|6666666.229905.rna.17 RNA ADOB02000009.1 137919 138000 3 + 82 tRNA-Leu-TAG - none -
fig|6666666.229905.rna.18 RNA ADOB02000009.1 138033 138104 3 + 72 tRNA-Gln-TTG - none -
fig|6666666.229905.rna.19 RNA ADOB02000009.1 138145 138216 1 + 72 tRNA-Gln-TTG - none -
fig|6666666.229905.rna.20 RNA ADOB02000009.1 161037 161110 3 + 74 tRNA-Met-CAT - none -
fig|6666666.229905.rna.21 RNA ADOB02000010.1 20484 20556 3 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.229905.rna.22 RNA ADOB02000010.1 20564 20636 2 + 73 tRNA-Asn-GTT - none -
fig|6666666.229905.rna.23 RNA ADOB02000011.1 4072 3999 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.229905.rna.24 RNA ADOB02000011.1 4171 4098 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.229905.rna.25 RNA ADOB02000013.1 27752 27670 -2 - 83 tRNA-Leu-CAA tRNAs
fig|6666666.229905.rna.26 RNA ADOB02000014.1 60055 60141 1 + 87 tRNA-Ser-GGA tRNAs
fig|6666666.229905.rna.27 RNA ADOB02000014.1 78016 77944 -1 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.229905.rna.28 RNA ADOB02000014.1 78127 78054 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.229905.rna.29 RNA ADOB02000014.1 78253 78134 -1 - 120 5S RNA - none -
fig|6666666.229905.rna.30 RNA ADOB02000015.1 27276 27366 3 + 91 tRNA-Ser-GCT - none -
fig|6666666.229905.rna.31 RNA ADOB02000015.1 27387 27460 3 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.229905.rna.32 RNA ADOB02000015.1 27518 27591 2 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.229905.rna.33 RNA ADOB02000016.1 37769 37696 -2 - 74 tRNA-Lys-CTT - none -
fig|6666666.229905.rna.34 RNA ADOB02000016.1 37870 37798 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.229905.rna.35 RNA ADOB02000016.1 37972 37900 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.229905.rna.36 RNA ADOB02000016.1 91450 91364 -1 - 87 tRNA-Ser-TGA - none -
fig|6666666.229905.rna.37 RNA ADOB02000016.1 98805 98877 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229905.rna.38 RNA ADOB02000016.1 98889 98959 3 + 71 tRNA-Cys-GCA tRNAs
fig|6666666.229905.rna.39 RNA ADOB02000018.1 58587 58660 3 + 74 tRNA-Met-CAT - none -
fig|6666666.229905.rna.40 RNA ADOB02000019.1 189 3231 3 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229905.rna.41 RNA ADOB02000019.1 3492 3607 3 + 116 5S RNA - none -
fig|6666666.229905.rna.42 RNA ADOB02000025.1 1600 61 -1 - 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229905.rna.43 RNA ADOB02000029.1 13961 13889 -2 - 73 tRNA-Asn-GTT - none -
fig|6666666.229905.rna.44 RNA ADOB02000037.1 45801 45874 3 + 74 tRNA-Arg-CCG tRNAs
fig|6666666.229905.rna.45 RNA ADOB02000037.1 45909 45981 3 + 73 tRNA-His-GTG - none -
fig|6666666.229905.rna.46 RNA ADOB02000037.1 45987 46060 3 + 74 tRNA-Pro-TGG - none -
fig|6666666.229905.rna.47 RNA ADOB02000040.1 58658 58730 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229905.rna.48 RNA ADOB02000041.1 8210 8283 2 + 74 tRNA-Pro-TGG - none -
fig|6666666.229905.rna.49 RNA ADOB02000041.1 8320 8393 1 + 74 tRNA-Arg-TCT - none -
fig|6666666.229905.rna.50 RNA ADOB02000043.1 92 165 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.229905.rna.51 RNA ADOB02000043.1 218 290 2 + 73 tRNA-Ala-TGC - none -