fig|6666666.229907.peg.1 CDS AEJO02000001.1 1437 4037 3 + 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229907.peg.2 CDS AEJO02000001.1 5059 4241 -1 - 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229907.peg.3 CDS AEJO02000001.1 6931 5255 -1 - 1677 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229907.peg.4 CDS AEJO02000001.1 6999 7127 3 + 129 hypothetical protein - none -
fig|6666666.229907.peg.5 CDS AEJO02000001.1 7638 7099 -3 - 540 Metal-dependent hydrolase - none -
fig|6666666.229907.peg.6 CDS AEJO02000001.1 9149 7809 -2 - 1341 FIG00782214: hypothetical protein - none -
fig|6666666.229907.peg.7 CDS AEJO02000001.1 10526 9186 -2 - 1341 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229907.peg.8 CDS AEJO02000001.1 11391 10615 -3 - 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229907.peg.9 CDS AEJO02000001.1 12026 11394 -2 - 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229907.peg.10 CDS AEJO02000001.1 13267 12023 -1 - 1245 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) - none -
fig|6666666.229907.peg.11 CDS AEJO02000001.1 14091 13270 -3 - 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229907.peg.12 CDS AEJO02000001.1 14368 15126 1 + 759 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229907.peg.13 CDS AEJO02000001.1 15202 15540 1 + 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229907.peg.14 CDS AEJO02000001.1 15679 16722 1 + 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229907.peg.15 CDS AEJO02000001.1 16724 17356 2 + 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229907.peg.16 CDS AEJO02000001.1 17353 18336 1 + 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229907.peg.17 CDS AEJO02000001.1 18340 19122 1 + 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229907.peg.18 CDS AEJO02000001.1 19154 19678 2 + 525 FIG00696143: hypothetical protein - none -
fig|6666666.229907.peg.19 CDS AEJO02000001.1 19815 19675 -3 - 141 hypothetical protein - none -
fig|6666666.229907.peg.20 CDS AEJO02000001.1 19769 21085 2 + 1317 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229907.peg.21 CDS AEJO02000003.1 13 132 1 + 120 hypothetical protein - none -
fig|6666666.229907.peg.22 CDS AEJO02000003.1 148 285 1 + 138 hypothetical protein - none -
fig|6666666.229907.peg.23 CDS AEJO02000003.1 559 365 -1 - 195 hypothetical protein - none -
fig|6666666.229907.peg.24 CDS AEJO02000003.1 2592 1687 -3 - 906 hypothetical protein - none -
fig|6666666.229907.peg.25 CDS AEJO02000003.1 2812 2934 1 + 123 hypothetical protein - none -
fig|6666666.229907.peg.26 CDS AEJO02000003.1 3503 4360 2 + 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.229907.peg.27 CDS AEJO02000003.1 6083 4449 -2 - 1635 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229907.peg.28 CDS AEJO02000003.1 6493 6203 -1 - 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229907.peg.29 CDS AEJO02000003.1 7062 6580 -3 - 483 FxsA protein - none -
fig|6666666.229907.peg.30 CDS AEJO02000003.1 7292 8710 2 + 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229907.peg.31 CDS AEJO02000003.1 8891 9928 2 + 1038 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229907.peg.32 CDS AEJO02000003.1 11433 10597 -3 - 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229907.peg.33 CDS AEJO02000003.1 12252 11449 -3 - 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229907.peg.34 CDS AEJO02000003.1 13262 12264 -2 - 999 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229907.peg.35 CDS AEJO02000003.1 13487 13374 -2 - 114 hypothetical protein - none -
fig|6666666.229907.peg.36 CDS AEJO02000003.1 13547 15004 2 + 1458 Permeases of the major facilitator superfamily - none -
fig|6666666.229907.peg.37 CDS AEJO02000003.1 16203 15031 -3 - 1173 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229907.peg.38 CDS AEJO02000003.1 16192 16335 1 + 144 hypothetical protein - none -
fig|6666666.229907.peg.39 CDS AEJO02000003.1 17731 16319 -1 - 1413 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229907.peg.40 CDS AEJO02000003.1 18548 17718 -2 - 831 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229907.peg.41 CDS AEJO02000003.1 18906 18715 -3 - 192 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229907.peg.42 CDS AEJO02000003.1 19837 18995 -1 - 843 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229907.peg.43 CDS AEJO02000003.1 21352 19841 -1 - 1512 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229907.peg.44 CDS AEJO02000003.1 22410 21412 -3 - 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229907.peg.45 CDS AEJO02000003.1 22668 23987 3 + 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229907.peg.46 CDS AEJO02000003.1 24037 25509 1 + 1473 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229907.peg.47 CDS AEJO02000003.1 26097 26378 3 + 282 VgrG-3 protein - none -
fig|6666666.229907.peg.48 CDS AEJO02000003.1 26966 27601 2 + 636 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229907.peg.49 CDS AEJO02000003.1 28516 27668 -1 - 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229907.peg.50 CDS AEJO02000003.1 29015 28701 -2 - 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229907.peg.51 CDS AEJO02000003.1 30056 29031 -2 - 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229907.peg.52 CDS AEJO02000003.1 31774 30071 -1 - 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229907.peg.53 CDS AEJO02000003.1 31820 31984 2 + 165 hypothetical protein - none -
fig|6666666.229907.peg.54 CDS AEJO02000003.1 32050 32334 1 + 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229907.peg.55 CDS AEJO02000003.1 32368 34854 1 + 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229907.peg.56 CDS AEJO02000003.1 34902 35741 3 + 840 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229907.peg.57 CDS AEJO02000003.1 35741 36622 2 + 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229907.peg.58 CDS AEJO02000003.1 36660 37109 3 + 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229907.peg.59 CDS AEJO02000003.1 37123 37758 1 + 636 Cytochrome c-type protein NapC - none -
fig|6666666.229907.peg.60 CDS AEJO02000003.1 39740 37833 -2 - 1908 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229907.peg.61 CDS AEJO02000003.1 40901 39858 -2 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229907.peg.62 CDS AEJO02000003.1 42048 40921 -3 - 1128 Fic family protein - none -
fig|6666666.229907.peg.63 CDS AEJO02000003.1 43145 42219 -2 - 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229907.peg.64 CDS AEJO02000003.1 43174 43287 1 + 114 hypothetical protein - none -
fig|6666666.229907.peg.65 CDS AEJO02000003.1 43425 44201 3 + 777 Protein HI0205 precursor - none -
fig|6666666.229907.peg.66 CDS AEJO02000003.1 44228 46042 2 + 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229907.peg.67 CDS AEJO02000003.1 49459 46544 -1 - 2916 hypothetical protein - none -
fig|6666666.229907.peg.68 CDS AEJO02000003.1 49850 49470 -2 - 381 hypothetical protein - none -
fig|6666666.229907.peg.69 CDS AEJO02000004.1 2454 838 -3 - 1617 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229907.peg.70 CDS AEJO02000004.1 2787 2470 -3 - 318 Flp pilus assembly surface protein TadF, ATP/GTP-binding motif Widespread colonization island
fig|6666666.229907.peg.71 CDS AEJO02000004.1 4469 3708 -2 - 762 Flp pilus assembly protein TadD, contains TPR repeat Widespread colonization island
fig|6666666.229907.peg.72 CDS AEJO02000004.1 5325 4459 -3 - 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229907.peg.73 CDS AEJO02000004.1 6209 5322 -2 - 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229907.peg.74 CDS AEJO02000004.1 7489 6209 -1 - 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229907.peg.75 CDS AEJO02000004.1 8627 7503 -2 - 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229907.peg.76 CDS AEJO02000004.1 9146 8643 -2 - 504 Flp pilus assembly protein RcpB Widespread colonization island
fig|6666666.229907.peg.77 CDS AEJO02000004.1 10405 9143 -1 - 1263 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229907.peg.78 CDS AEJO02000004.1 11351 10527 -2 - 825 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229907.peg.79 CDS AEJO02000004.1 11583 11407 -3 - 177 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229907.peg.80 CDS AEJO02000004.1 12404 12177 -2 - 228 Flp pilus assembly protein, pilin Flp Widespread colonization island
fig|6666666.229907.peg.81 CDS AEJO02000004.1 12970 13434 1 + 465 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229907.peg.82 CDS AEJO02000004.1 13596 14297 3 + 702 unknown - none -
fig|6666666.229907.peg.83 CDS AEJO02000004.1 14301 16223 3 + 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229907.peg.84 CDS AEJO02000004.1 16265 16438 2 + 174 hypothetical protein - none -
fig|6666666.229907.peg.85 CDS AEJO02000004.1 16892 20350 2 + 3459 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229907.peg.86 CDS AEJO02000004.1 20452 21036 1 + 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229907.peg.87 CDS AEJO02000004.1 21177 21911 3 + 735 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229907.peg.88 CDS AEJO02000004.1 21932 22651 2 + 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229907.peg.89 CDS AEJO02000004.1 22656 23318 3 + 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229907.peg.90 CDS AEJO02000004.1 23318 24004 2 + 687 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229907.peg.91 CDS AEJO02000004.1 24546 26144 3 + 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229907.peg.92 CDS AEJO02000004.1 26408 26866 2 + 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229907.peg.93 CDS AEJO02000004.1 26976 27944 3 + 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229907.peg.94 CDS AEJO02000004.1 27944 28261 2 + 318 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229907.peg.95 CDS AEJO02000004.1 28279 30102 1 + 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229907.peg.96 CDS AEJO02000004.1 30120 31586 3 + 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229907.peg.97 CDS AEJO02000004.1 31591 32970 1 + 1380 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229907.peg.98 CDS AEJO02000004.1 32964 34049 3 + 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229907.peg.99 CDS AEJO02000004.1 34076 35380 2 + 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229907.peg.100 CDS AEJO02000004.1 35395 36585 1 + 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229907.peg.101 CDS AEJO02000004.1 36625 37689 1 + 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229907.peg.102 CDS AEJO02000004.1 37760 39190 2 + 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229907.peg.103 CDS AEJO02000004.1 39203 40132 2 + 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229907.peg.104 CDS AEJO02000004.1 40129 40896 1 + 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229907.peg.105 CDS AEJO02000004.1 40957 42201 1 + 1245 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229907.peg.106 CDS AEJO02000004.1 42285 43565 3 + 1281 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229907.peg.107 CDS AEJO02000004.1 43603 44520 1 + 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) KDO2-Lipid A biosynthesis
fig|6666666.229907.peg.108 CDS AEJO02000004.1 44719 45879 1 + 1161 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229907.peg.109 CDS AEJO02000004.1 46013 47893 2 + 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229907.peg.110 CDS AEJO02000004.1 47959 48303 1 + 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352
fig|6666666.229907.peg.111 CDS AEJO02000004.1 48440 49573 2 + 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229907.peg.112 CDS AEJO02000004.1 49575 50255 3 + 681 FIG009095: D,D-carboxypeptidase family protein CBSS-584.1.peg.1352
fig|6666666.229907.peg.113 CDS AEJO02000004.1 50501 51124 2 + 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229907.peg.114 CDS AEJO02000004.1 51175 51999 1 + 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229907.peg.115 CDS AEJO02000004.1 53337 52510 -3 - 828 FIG00711691: hypothetical protein - none -
fig|6666666.229907.peg.116 CDS AEJO02000004.1 53774 53310 -2 - 465 FIG00710847: hypothetical protein - none -
fig|6666666.229907.peg.117 CDS AEJO02000004.1 53996 54826 2 + 831 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229907.peg.118 CDS AEJO02000004.1 54951 55484 3 + 534 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229907.peg.119 CDS AEJO02000004.1 55542 56165 3 + 624 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229907.peg.120 CDS AEJO02000004.1 57272 56244 -2 - 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.121 CDS AEJO02000004.1 57543 59681 3 + 2139 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229907.peg.122 CDS AEJO02000004.1 60122 59778 -2 - 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229907.peg.123 CDS AEJO02000004.1 60524 60132 -2 - 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229907.peg.124 CDS AEJO02000004.1 61306 60536 -1 - 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229907.peg.125 CDS AEJO02000004.1 63119 61311 -2 - 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229907.peg.126 CDS AEJO02000004.1 63363 63175 -3 - 189 hypothetical protein - none -
fig|6666666.229907.peg.127 CDS AEJO02000004.1 63427 64398 1 + 972 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229907.peg.128 CDS AEJO02000004.1 65231 64464 -2 - 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229907.peg.129 CDS AEJO02000004.1 66214 65231 -1 - 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229907.peg.130 CDS AEJO02000004.1 67203 66214 -3 - 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229907.peg.131 CDS AEJO02000004.1 68096 67203 -2 - 894 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229907.peg.132 CDS AEJO02000004.1 69235 68165 -1 - 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229907.peg.133 CDS AEJO02000004.1 69306 69749 3 + 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229907.peg.134 CDS AEJO02000004.1 69834 70436 3 + 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229907.peg.135 CDS AEJO02000004.1 70468 72405 1 + 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229907.peg.136 CDS AEJO02000004.1 72578 72907 2 + 330 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.229907.peg.137 CDS AEJO02000004.1 73091 73345 2 + 255 hypothetical protein - none -
fig|6666666.229907.peg.138 CDS AEJO02000004.1 73345 73545 1 + 201 hypothetical protein - none -
fig|6666666.229907.peg.139 CDS AEJO02000004.1 74375 73602 -2 - 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229907.peg.140 CDS AEJO02000004.1 74661 74353 -3 - 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229907.peg.141 CDS AEJO02000004.1 76910 74694 -2 - 2217 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229907.peg.142 CDS AEJO02000004.1 77734 77438 -1 - 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229907.peg.143 CDS AEJO02000004.1 78207 77737 -3 - 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229907.peg.144 CDS AEJO02000004.1 78762 78211 -3 - 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229907.peg.145 CDS AEJO02000004.1 79526 78768 -2 - 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229907.peg.146 CDS AEJO02000004.1 79712 79560 -2 - 153 hypothetical protein - none -
fig|6666666.229907.peg.147 CDS AEJO02000004.1 79798 80445 1 + 648 Outer membrane protein W precursor - none -
fig|6666666.229907.peg.148 CDS AEJO02000004.1 82139 80463 -2 - 1677 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229907.peg.149 CDS AEJO02000004.1 83130 82213 -3 - 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229907.peg.150 CDS AEJO02000004.1 83315 83175 -2 - 141 hypothetical protein - none -
fig|6666666.229907.peg.151 CDS AEJO02000004.1 83271 83849 3 + 579 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229907.peg.152 CDS AEJO02000004.1 87030 83959 -3 - 3072 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229907.peg.153 CDS AEJO02000004.1 89238 87220 -3 - 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229907.peg.154 CDS AEJO02000004.1 89408 90628 2 + 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229907.peg.155 CDS AEJO02000004.1 90743 90609 -2 - 135 hypothetical protein - none -
fig|6666666.229907.peg.156 CDS AEJO02000004.1 90769 92616 1 + 1848 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229907.peg.157 CDS AEJO02000004.1 93701 92691 -2 - 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229907.peg.158 CDS AEJO02000004.1 95258 93720 -2 - 1539 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229907.peg.159 CDS AEJO02000004.1 96325 95333 -1 - 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229907.peg.160 CDS AEJO02000004.1 97553 96540 -2 - 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229907.peg.161 CDS AEJO02000004.1 97794 98837 3 + 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229907.peg.162 CDS AEJO02000004.1 98905 100059 1 + 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229907.peg.163 CDS AEJO02000004.1 100053 101084 3 + 1032 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229907.peg.164 CDS AEJO02000004.1 102848 101349 -2 - 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229907.peg.165 CDS AEJO02000004.1 104560 103127 -1 - 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229907.peg.166 CDS AEJO02000004.1 105959 104547 -2 - 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229907.peg.167 CDS AEJO02000004.1 107655 106153 -3 - 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229907.peg.168 CDS AEJO02000004.1 108545 107670 -2 - 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229907.peg.169 CDS AEJO02000004.1 108829 108542 -1 - 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229907.peg.170 CDS AEJO02000004.1 109876 108869 -1 - 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229907.peg.171 CDS AEJO02000004.1 110042 109914 -2 - 129 hypothetical protein - none -
fig|6666666.229907.peg.172 CDS AEJO02000004.1 110122 111018 1 + 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229907.peg.173 CDS AEJO02000004.1 111410 112954 2 + 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229907.peg.174 CDS AEJO02000004.1 113235 113017 -3 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229907.peg.175 CDS AEJO02000004.1 113290 113412 1 + 123 hypothetical protein - none -
fig|6666666.229907.peg.176 CDS AEJO02000004.1 113461 114762 1 + 1302 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229907.peg.177 CDS AEJO02000004.1 114774 115199 3 + 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229907.peg.178 CDS AEJO02000004.1 115335 116480 3 + 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229907.peg.179 CDS AEJO02000004.1 116588 116743 2 + 156 Mobile element protein - none -
fig|6666666.229907.peg.180 CDS AEJO02000004.1 116792 116959 2 + 168 hypothetical protein - none -
fig|6666666.229907.peg.181 CDS AEJO02000004.1 118279 117110 -1 - 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229907.peg.182 CDS AEJO02000004.1 118487 118296 -2 - 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229907.peg.183 CDS AEJO02000004.1 119077 118502 -1 - 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229907.peg.184 CDS AEJO02000004.1 119845 119105 -1 - 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229907.peg.185 CDS AEJO02000004.1 120888 119878 -3 - 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229907.peg.186 CDS AEJO02000004.1 121364 120885 -2 - 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229907.peg.187 CDS AEJO02000004.1 122056 121361 -1 - 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229907.peg.188 CDS AEJO02000004.1 122334 122056 -3 - 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229907.peg.189 CDS AEJO02000004.1 122486 123160 2 + 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229907.peg.190 CDS AEJO02000004.1 123163 123837 1 + 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229907.peg.191 CDS AEJO02000004.1 124332 125336 3 + 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229907.peg.192 CDS AEJO02000004.1 126067 125423 -1 - 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229907.peg.193 CDS AEJO02000004.1 128095 126593 -1 - 1503 Sodium-dependent transporter - none -
fig|6666666.229907.peg.194 CDS AEJO02000004.1 128513 128788 2 + 276 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229907.peg.195 CDS AEJO02000004.1 128790 129506 3 + 717 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229907.peg.196 CDS AEJO02000004.1 129888 129760 -3 - 129 hypothetical protein - none -
fig|6666666.229907.peg.197 CDS AEJO02000005.1 24 434 3 + 411 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229907.peg.198 CDS AEJO02000005.1 569 709 2 + 141 hypothetical protein - none -
fig|6666666.229907.peg.199 CDS AEJO02000005.1 726 1025 3 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229907.peg.200 CDS AEJO02000005.1 1056 2906 3 + 1851 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229907.peg.201 CDS AEJO02000005.1 2887 3888 1 + 1002 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229907.peg.202 CDS AEJO02000005.1 4108 6735 1 + 2628 Iron siderophore receptor protein - none -
fig|6666666.229907.peg.203 CDS AEJO02000005.1 6955 6815 -1 - 141 hypothetical protein - none -
fig|6666666.229907.peg.204 CDS AEJO02000005.1 7085 9706 2 + 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229907.peg.205 CDS AEJO02000005.1 10743 9790 -3 - 954 Inositol transport system permease protein Inositol catabolism
fig|6666666.229907.peg.206 CDS AEJO02000005.1 11573 10794 -2 - 780 Inositol transport system ATP-binding protein Inositol catabolism
fig|6666666.229907.peg.207 CDS AEJO02000005.1 12297 11680 -3 - 618 Inositol transport system ATP-binding protein Inositol catabolism
fig|6666666.229907.peg.208 CDS AEJO02000005.1 13298 12366 -2 - 933 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229907.peg.209 CDS AEJO02000005.1 14233 13382 -1 - 852 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229907.peg.210 CDS AEJO02000005.1 15473 14535 -2 - 939 Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229907.peg.211 CDS AEJO02000005.1 17272 15764 -1 - 1509 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) Inositol catabolism
fig|6666666.229907.peg.212 CDS AEJO02000005.1 17489 17602 2 + 114 hypothetical protein - none -
fig|6666666.229907.peg.213 CDS AEJO02000005.1 18012 19358 3 + 1347 CRISPR-associated protein, Csy1 family CRISPRs
fig|6666666.229907.peg.214 CDS AEJO02000005.1 19368 20327 3 + 960 CRISPR-associated protein, Csy2 family CRISPRs
fig|6666666.229907.peg.215 CDS AEJO02000005.1 20327 21337 2 + 1011 CRISPR-associated protein, Csy3 family CRISPRs
fig|6666666.229907.peg.216 CDS AEJO02000005.1 21340 21903 1 + 564 CRISPR-associated protein, Csy4 family CRISPRs
fig|6666666.229907.peg.217 CDS AEJO02000005.1 25236 21949 -3 - 3288 CRISPR-associated helicase Cas3, Yersinia-type CRISPRs
fig|6666666.229907.peg.218 CDS AEJO02000005.1 26198 25233 -2 - 966 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229907.peg.219 CDS AEJO02000005.1 26534 26959 2 + 426 Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229907.peg.220 CDS AEJO02000005.1 26920 27594 1 + 675 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229907.peg.221 CDS AEJO02000005.1 27717 28574 3 + 858 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229907.peg.222 CDS AEJO02000005.1 28665 29453 3 + 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229907.peg.223 CDS AEJO02000005.1 29526 31505 3 + 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229907.peg.224 CDS AEJO02000005.1 32106 31624 -3 - 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229907.peg.225 CDS AEJO02000005.1 32314 33474 1 + 1161 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229907.peg.226 CDS AEJO02000005.1 33487 35001 1 + 1515 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229907.peg.227 CDS AEJO02000005.1 35145 35426 3 + 282 HipB protein Persister Cells
fig|6666666.229907.peg.228 CDS AEJO02000005.1 35559 35380 -3 - 180 hypothetical protein - none -
fig|6666666.229907.peg.229 CDS AEJO02000005.1 35801 36043 2 + 243 HipA protein Persister Cells
fig|6666666.229907.peg.230 CDS AEJO02000005.1 36933 36040 -3 - 894 hypothetical protein - none -
fig|6666666.229907.peg.231 CDS AEJO02000005.1 39864 37000 -3 - 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229907.peg.232 CDS AEJO02000005.1 40250 39936 -2 - 315 RNA-binding domain protein - none -
fig|6666666.229907.peg.233 CDS AEJO02000005.1 40738 40289 -1 - 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229907.peg.234 CDS AEJO02000005.1 40948 42342 1 + 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229907.peg.235 CDS AEJO02000005.1 42446 43051 2 + 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229907.peg.236 CDS AEJO02000005.1 43099 43212 1 + 114 hypothetical protein - none -
fig|6666666.229907.peg.237 CDS AEJO02000005.1 44252 43347 -2 - 906 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229907.peg.238 CDS AEJO02000005.1 45005 44271 -2 - 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229907.peg.239 CDS AEJO02000005.1 45132 45395 3 + 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229907.peg.240 CDS AEJO02000005.1 45853 45659 -1 - 195 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229907.peg.241 CDS AEJO02000005.1 46034 45897 -2 - 138 hypothetical protein - none -
fig|6666666.229907.peg.242 CDS AEJO02000005.1 46148 47362 2 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229907.peg.243 CDS AEJO02000005.1 48298 47432 -1 - 867 hypothetical protein - none -
fig|6666666.229907.peg.244 CDS AEJO02000005.1 51123 48298 -3 - 2826 hypothetical protein - none -
fig|6666666.229907.peg.245 CDS AEJO02000005.1 52130 51174 -2 - 957 hypothetical protein - none -
fig|6666666.229907.peg.246 CDS AEJO02000005.1 53494 52799 -1 - 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229907.peg.247 CDS AEJO02000005.1 54348 53488 -3 - 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229907.peg.248 CDS AEJO02000005.1 55138 54389 -1 - 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229907.peg.249 CDS AEJO02000005.1 56321 55230 -2 - 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229907.peg.250 CDS AEJO02000005.1 56667 58439 3 + 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229907.peg.251 CDS AEJO02000005.1 58494 58955 3 + 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229907.peg.252 CDS AEJO02000005.1 59032 59706 1 + 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229907.peg.253 CDS AEJO02000005.1 60428 59775 -2 - 654 hypothetical protein - none -
fig|6666666.229907.peg.254 CDS AEJO02000005.1 61202 60438 -2 - 765 hypothetical protein - none -
fig|6666666.229907.peg.255 CDS AEJO02000006.1 406 260 -1 - 147 hypothetical protein - none -
fig|6666666.229907.peg.256 CDS AEJO02000007.1 1206 1328 3 + 123 hypothetical protein - none -
fig|6666666.229907.peg.257 CDS AEJO02000007.1 2038 1400 -1 - 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229907.peg.258 CDS AEJO02000007.1 2675 2115 -2 - 561 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229907.peg.259 CDS AEJO02000007.1 4248 2740 -3 - 1509 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229907.peg.260 CDS AEJO02000007.1 6383 4326 -2 - 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229907.peg.261 CDS AEJO02000007.1 7068 6457 -3 - 612 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229907.peg.262 CDS AEJO02000007.1 7286 8569 2 + 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229907.peg.263 CDS AEJO02000007.1 8532 11189 3 + 2658 Paraquat-inducible protein B Oxidative stress
fig|6666666.229907.peg.264 CDS AEJO02000007.1 12508 11264 -1 - 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229907.peg.265 CDS AEJO02000007.1 12772 13890 1 + 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229907.peg.266 CDS AEJO02000007.1 13874 14734 2 + 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229907.peg.267 CDS AEJO02000007.1 14734 15507 1 + 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229907.peg.268 CDS AEJO02000007.1 15638 16735 2 + 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229907.peg.269 CDS AEJO02000007.1 16859 17755 2 + 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229907.peg.270 CDS AEJO02000007.1 19151 17835 -2 - 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229907.peg.271 CDS AEJO02000007.1 19458 21098 3 + 1641 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229907.peg.272 CDS AEJO02000007.1 22935 21595 -3 - 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229907.peg.273 CDS AEJO02000007.1 23592 22948 -3 - 645 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229907.peg.274 CDS AEJO02000007.1 26401 23657 -1 - 2745 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229907.peg.275 CDS AEJO02000007.1 26884 26405 -1 - 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229907.peg.276 CDS AEJO02000007.1 26998 27171 1 + 174 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229907.peg.277 CDS AEJO02000007.1 28604 27600 -2 - 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229907.peg.278 CDS AEJO02000007.1 29297 28650 -2 - 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229907.peg.279 CDS AEJO02000007.1 30909 29281 -3 - 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229907.peg.280 CDS AEJO02000007.1 31922 30918 -2 - 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229907.peg.281 CDS AEJO02000007.1 32324 31944 -2 - 381 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229907.peg.282 CDS AEJO02000007.1 33172 33017 -1 - 156 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229907.peg.283 CDS AEJO02000007.1 34200 33496 -3 - 705 hypothetical protein - none -
fig|6666666.229907.peg.284 CDS AEJO02000007.1 34916 34266 -2 - 651 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229907.peg.285 CDS AEJO02000007.1 35927 35061 -2 - 867 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229907.peg.286 CDS AEJO02000007.1 37718 35940 -2 - 1779 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229907.peg.287 CDS AEJO02000007.1 38389 37715 -1 - 675 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229907.peg.288 CDS AEJO02000007.1 40342 38504 -1 - 1839 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229907.peg.289 CDS AEJO02000007.1 41221 40406 -1 - 816 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229907.peg.290 CDS AEJO02000007.1 42252 41218 -3 - 1035 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229907.peg.291 CDS AEJO02000007.1 42379 42236 -1 - 144 hypothetical protein - none -
fig|6666666.229907.peg.292 CDS AEJO02000007.1 42507 42379 -3 - 129 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229907.peg.293 CDS AEJO02000007.1 44113 42488 -1 - 1626 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229907.peg.294 CDS AEJO02000007.1 45068 44127 -2 - 942 FIG00807791: hypothetical protein - none -
fig|6666666.229907.peg.295 CDS AEJO02000007.1 48552 45676 -3 - 2877 helicase (Snf2/Rad54 family) - none -
fig|6666666.229907.peg.296 CDS AEJO02000007.1 50482 48695 -1 - 1788 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229907.peg.297 CDS AEJO02000007.1 50947 50513 -1 - 435 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229907.peg.298 CDS AEJO02000007.1 51263 51925 2 + 663 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229907.peg.299 CDS AEJO02000007.1 52011 52340 3 + 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) CBSS-326442.4.peg.1852;
Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229907.peg.300 CDS AEJO02000007.1 52438 53319 1 + 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229907.peg.301 CDS AEJO02000007.1 53319 54209 3 + 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229907.peg.302 CDS AEJO02000007.1 54209 55066 2 + 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229907.peg.303 CDS AEJO02000007.1 55063 55911 1 + 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229907.peg.304 CDS AEJO02000007.1 56158 55886 -1 - 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229907.peg.305 CDS AEJO02000007.1 56303 56983 2 + 681 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229907.peg.306 CDS AEJO02000007.1 57046 57504 1 + 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229907.peg.307 CDS AEJO02000007.1 57504 57977 3 + 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229907.peg.308 CDS AEJO02000007.1 57986 60127 2 + 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229907.peg.309 CDS AEJO02000007.1 60630 60124 -3 - 507 FIG001674: hypothetical protein - none -
fig|6666666.229907.peg.310 CDS AEJO02000007.1 60693 61643 3 + 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p YrdC-YciO-Sua5 protein family
fig|6666666.229907.peg.311 CDS AEJO02000007.1 62754 61810 -3 - 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229907.peg.312 CDS AEJO02000007.1 63568 62744 -1 - 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229907.peg.313 CDS AEJO02000007.1 64933 63578 -1 - 1356 FIG00732228: membrane protein - none -
fig|6666666.229907.peg.314 CDS AEJO02000007.1 65225 64956 -2 - 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229907.peg.315 CDS AEJO02000007.1 66410 65793 -2 - 618 hypothetical protein - none -
fig|6666666.229907.peg.316 CDS AEJO02000007.1 66565 66365 -1 - 201 hypothetical protein - none -
fig|6666666.229907.peg.317 CDS AEJO02000008.1 415 236 -1 - 180 hypothetical protein - none -
fig|6666666.229907.peg.318 CDS AEJO02000008.1 1907 432 -2 - 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229907.peg.319 CDS AEJO02000008.1 2047 3567 1 + 1521 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229907.peg.320 CDS AEJO02000008.1 3581 4546 2 + 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229907.peg.321 CDS AEJO02000008.1 4634 5932 2 + 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229907.peg.322 CDS AEJO02000008.1 6287 5997 -2 - 291 hypothetical protein - none -
fig|6666666.229907.peg.323 CDS AEJO02000008.1 7293 6310 -3 - 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229907.peg.324 CDS AEJO02000008.1 7581 9113 3 + 1533 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229907.peg.325 CDS AEJO02000008.1 10367 9183 -2 - 1185 Sugar efflux transporter SotB - none -
fig|6666666.229907.peg.326 CDS AEJO02000008.1 11571 10369 -3 - 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229907.peg.327 CDS AEJO02000008.1 12156 11572 -3 - 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229907.peg.328 CDS AEJO02000008.1 12816 12166 -3 - 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229907.peg.329 CDS AEJO02000008.1 13125 14165 3 + 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229907.peg.330 CDS AEJO02000008.1 14327 15370 2 + 1044 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229907.peg.331 CDS AEJO02000008.1 15398 17455 2 + 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229907.peg.332 CDS AEJO02000008.1 17471 18517 2 + 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229907.peg.333 CDS AEJO02000008.1 18796 20916 1 + 2121 unknown - none -
fig|6666666.229907.peg.334 CDS AEJO02000008.1 22726 22154 -1 - 573 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.229907.peg.335 CDS AEJO02000008.1 23515 22856 -1 - 660 putative membrane protein - none -
fig|6666666.229907.peg.336 CDS AEJO02000008.1 23712 23596 -3 - 117 hypothetical protein - none -
fig|6666666.229907.peg.337 CDS AEJO02000008.1 23727 24272 3 + 546 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229907.peg.338 CDS AEJO02000008.1 24281 24529 2 + 249 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229907.peg.339 CDS AEJO02000008.1 25799 24792 -2 - 1008 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229907.peg.340 CDS AEJO02000008.1 25957 27330 1 + 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229907.peg.341 CDS AEJO02000008.1 27528 28826 3 + 1299 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229907.peg.342 CDS AEJO02000008.1 28826 29596 2 + 771 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway - none -
fig|6666666.229907.peg.343 CDS AEJO02000008.1 29696 30715 2 + 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229907.peg.344 CDS AEJO02000008.1 30843 31655 3 + 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229907.peg.345 CDS AEJO02000008.1 32610 32194 -3 - 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229907.peg.346 CDS AEJO02000008.1 32683 33111 1 + 429 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229907.peg.347 CDS AEJO02000008.1 33104 33397 2 + 294 UPF0125 protein yfjF - none -
fig|6666666.229907.peg.348 CDS AEJO02000008.1 33430 34623 1 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229907.peg.349 CDS AEJO02000008.1 34630 35964 1 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229907.peg.350 CDS AEJO02000008.1 36824 35970 -2 - 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229907.peg.351 CDS AEJO02000008.1 37385 36852 -2 - 534 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229907.peg.352 CDS AEJO02000008.1 38114 37389 -2 - 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229907.peg.353 CDS AEJO02000008.1 38638 38120 -1 - 519 LptA, protein essential for LPS transport across the periplasm KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229907.peg.354 CDS AEJO02000008.1 39194 38619 -2 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229907.peg.355 CDS AEJO02000008.1 39307 39191 -1 - 117 hypothetical protein - none -
fig|6666666.229907.peg.356 CDS AEJO02000008.1 39477 40274 3 + 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229907.peg.357 CDS AEJO02000008.1 40268 41053 2 + 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229907.peg.358 CDS AEJO02000008.1 41076 41585 3 + 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229907.peg.359 CDS AEJO02000008.1 41614 42255 1 + 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229907.peg.360 CDS AEJO02000008.1 42349 42618 1 + 270 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229907.peg.361 CDS AEJO02000008.1 42618 42875 3 + 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229907.peg.362 CDS AEJO02000008.1 42892 44169 1 + 1278 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229907.peg.363 CDS AEJO02000008.1 44521 44231 -1 - 291 FIG00696346: hypothetical protein - none -
fig|6666666.229907.peg.364 CDS AEJO02000008.1 44724 46154 3 + 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229907.peg.365 CDS AEJO02000008.1 46231 46770 1 + 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229907.peg.366 CDS AEJO02000008.1 46767 47435 3 + 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229907.peg.367 CDS AEJO02000008.1 47500 48225 1 + 726 Integral membrane protein TerC - none -
fig|6666666.229907.peg.368 CDS AEJO02000008.1 49743 48334 -3 - 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229907.peg.369 CDS AEJO02000008.1 50130 51983 3 + 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229907.peg.370 CDS AEJO02000008.1 52093 51980 -1 - 114 hypothetical protein - none -
fig|6666666.229907.peg.371 CDS AEJO02000008.1 52209 54719 3 + 2511 TolA protein Ton and Tol transport systems
fig|6666666.229907.peg.372 CDS AEJO02000008.1 55247 54783 -2 - 465 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229907.peg.373 CDS AEJO02000008.1 55405 56298 1 + 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229907.peg.374 CDS AEJO02000008.1 56411 57415 2 + 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229907.peg.375 CDS AEJO02000008.1 57550 59061 1 + 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229907.peg.376 CDS AEJO02000008.1 59376 60212 3 + 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229907.peg.377 CDS AEJO02000008.1 60960 60265 -3 - 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229907.peg.378 CDS AEJO02000008.1 62341 60953 -1 - 1389 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229907.peg.379 CDS AEJO02000008.1 62480 62611 2 + 132 hypothetical protein - none -
fig|6666666.229907.peg.380 CDS AEJO02000008.1 62700 65147 3 + 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229907.peg.381 CDS AEJO02000008.1 65160 66104 3 + 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229907.peg.382 CDS AEJO02000008.1 66132 66572 3 + 441 hypothetical protein - none -
fig|6666666.229907.peg.383 CDS AEJO02000008.1 66628 67902 1 + 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229907.peg.384 CDS AEJO02000008.1 68072 68680 2 + 609 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229907.peg.385 CDS AEJO02000008.1 68776 70029 1 + 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229907.peg.386 CDS AEJO02000008.1 70029 70916 3 + 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229907.peg.387 CDS AEJO02000008.1 72390 71092 -3 - 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229907.peg.388 CDS AEJO02000008.1 73447 72554 -1 - 894 Tyrosine recombinase XerD - none -
fig|6666666.229907.peg.389 CDS AEJO02000008.1 73890 73450 -3 - 441 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229907.peg.390 CDS AEJO02000008.1 73953 74858 3 + 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229907.peg.391 CDS AEJO02000008.1 75323 74949 -2 - 375 opacity associated protein - none -
fig|6666666.229907.peg.392 CDS AEJO02000008.1 76707 75385 -3 - 1323 Cell envelope opacity-associated protein A - none -
fig|6666666.229907.peg.393 CDS AEJO02000008.1 77910 76879 -3 - 1032 Lysyl-lysine 2,3-aminomutase Translation elongation factor P lysylation
fig|6666666.229907.peg.394 CDS AEJO02000008.1 77975 78496 2 + 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229907.peg.395 CDS AEJO02000008.1 78827 80203 2 + 1377 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229907.peg.396 CDS AEJO02000008.1 80365 81579 1 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229907.peg.397 CDS AEJO02000008.1 82322 81645 -2 - 678 YheO-like PAS domain - none -
fig|6666666.229907.peg.398 CDS AEJO02000008.1 82891 82385 -1 - 507 Arabinose efflux permease - none -
fig|6666666.229907.peg.399 CDS AEJO02000008.1 83615 82884 -2 - 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229907.peg.400 CDS AEJO02000008.1 83726 84469 2 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.401 CDS AEJO02000008.1 84477 85889 3 + 1413 Putative cell division protein precursor - none -
fig|6666666.229907.peg.402 CDS AEJO02000008.1 86825 85962 -2 - 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229907.peg.403 CDS AEJO02000008.1 87707 86967 -2 - 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229907.peg.404 CDS AEJO02000008.1 90165 87853 -3 - 2313 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229907.peg.405 CDS AEJO02000008.1 91085 90264 -2 - 822 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229907.peg.406 CDS AEJO02000008.1 91428 91778 3 + 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229907.peg.407 CDS AEJO02000008.1 91779 92132 3 + 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229907.peg.408 CDS AEJO02000008.1 92134 93180 1 + 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229907.peg.409 CDS AEJO02000008.1 93182 94114 2 + 933 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229907.peg.410 CDS AEJO02000008.1 94198 94359 1 + 162 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229907.peg.411 CDS AEJO02000008.1 95424 94459 -3 - 966 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229907.peg.412 CDS AEJO02000008.1 96406 95486 -1 - 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229907.peg.413 CDS AEJO02000008.1 96972 96406 -3 - 567 FIG00696199: hypothetical protein - none -
fig|6666666.229907.peg.414 CDS AEJO02000008.1 97753 96974 -1 - 780 UPF0246 protein YaaA - none -
fig|6666666.229907.peg.415 CDS AEJO02000008.1 98443 97775 -1 - 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229907.peg.416 CDS AEJO02000008.1 98729 99112 2 + 384 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229907.peg.417 CDS AEJO02000009.1 328 65 -1 - 264 Phage tail fibers Phage tail fiber proteins
fig|6666666.229907.peg.418 CDS AEJO02000009.1 528 1223 3 + 696 hypothetical protein - none -
fig|6666666.229907.peg.419 CDS AEJO02000009.1 1358 2422 2 + 1065 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229907.peg.420 CDS AEJO02000009.1 2422 3216 1 + 795 Glutathione synthetase (EC 6.3.2.3) Cluster containing Glutathione synthetase;
Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229907.peg.421 CDS AEJO02000009.1 3229 4263 1 + 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229907.peg.422 CDS AEJO02000009.1 4346 4555 2 + 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229907.peg.423 CDS AEJO02000009.1 7071 4675 -3 - 2397 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229907.peg.424 CDS AEJO02000009.1 7915 7166 -1 - 750 ABC transporter ATP-binding protein - none -
fig|6666666.229907.peg.425 CDS AEJO02000009.1 8925 7912 -3 - 1014 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229907.peg.426 CDS AEJO02000009.1 9308 8925 -2 - 384 ABC transporter, solute-binding protein - none -
fig|6666666.229907.peg.427 CDS AEJO02000010.1 257 928 2 + 672 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229907.peg.428 CDS AEJO02000010.1 956 1705 2 + 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229907.peg.429 CDS AEJO02000010.1 1843 2934 1 + 1092 Putative exported protein precursor - none -
fig|6666666.229907.peg.430 CDS AEJO02000010.1 4436 3066 -2 - 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229907.peg.431 CDS AEJO02000010.1 4522 5652 1 + 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229907.peg.432 CDS AEJO02000010.1 5649 6563 3 + 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229907.peg.433 CDS AEJO02000010.1 6728 7774 2 + 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229907.peg.434 CDS AEJO02000010.1 8263 7835 -1 - 429 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.229907.peg.435 CDS AEJO02000010.1 9678 8305 -3 - 1374 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229907.peg.436 CDS AEJO02000010.1 10564 9695 -1 - 870 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229907.peg.437 CDS AEJO02000010.1 12121 10580 -1 - 1542 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229907.peg.438 CDS AEJO02000010.1 12682 12134 -1 - 549 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229907.peg.439 CDS AEJO02000010.1 13166 12696 -2 - 471 ATP synthase F0 sector subunit b - none -
fig|6666666.229907.peg.440 CDS AEJO02000010.1 13470 13216 -3 - 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) - none -
fig|6666666.229907.peg.441 CDS AEJO02000010.1 14310 13522 -3 - 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229907.peg.442 CDS AEJO02000010.1 14712 14335 -3 - 378 FIG048548: ATP synthase protein I2 - none -
fig|6666666.229907.peg.443 CDS AEJO02000010.1 15507 14824 -3 - 684 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229907.peg.444 CDS AEJO02000010.1 15970 15500 -1 - 471 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229907.peg.445 CDS AEJO02000010.1 16014 16871 3 + 858 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229907.peg.446 CDS AEJO02000010.1 19032 17143 -3 - 1890 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229907.peg.447 CDS AEJO02000010.1 19904 19461 -2 - 444 Flavoprotein MioC Flavodoxin
fig|6666666.229907.peg.448 CDS AEJO02000010.1 20179 19961 -1 - 219 FIG074102: hypothetical protein - none -
fig|6666666.229907.peg.449 CDS AEJO02000010.1 20375 21388 2 + 1014 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229907.peg.450 CDS AEJO02000010.1 21830 21426 -2 - 405 hypothetical protein - none -
fig|6666666.229907.peg.451 CDS AEJO02000010.1 21851 21982 2 + 132 hypothetical protein - none -
fig|6666666.229907.peg.452 CDS AEJO02000010.1 22827 22030 -3 - 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229907.peg.453 CDS AEJO02000010.1 23843 22830 -2 - 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.454 CDS AEJO02000010.1 24433 23921 -1 - 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229907.peg.455 CDS AEJO02000010.1 24955 24449 -1 - 507 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229907.peg.456 CDS AEJO02000010.1 25216 26538 1 + 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229907.peg.457 CDS AEJO02000010.1 26708 28456 2 + 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229907.peg.458 CDS AEJO02000010.1 28473 30107 3 + 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229907.peg.459 CDS AEJO02000010.1 30838 30218 -1 - 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229907.peg.460 CDS AEJO02000010.1 31749 30850 -3 - 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229907.peg.461 CDS AEJO02000010.1 31908 32636 3 + 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229907.peg.462 CDS AEJO02000010.1 32912 32697 -2 - 216 Protein SlyX - none -
fig|6666666.229907.peg.463 CDS AEJO02000010.1 33007 33732 1 + 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229907.peg.464 CDS AEJO02000010.1 33812 34480 2 + 669 YheO-like PAS domain - none -
fig|6666666.229907.peg.465 CDS AEJO02000010.1 34484 34861 2 + 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229907.peg.466 CDS AEJO02000010.1 34858 35220 1 + 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229907.peg.467 CDS AEJO02000010.1 35220 35510 3 + 291 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229907.peg.468 CDS AEJO02000010.1 36282 35515 -3 - 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229907.peg.469 CDS AEJO02000010.1 36975 36292 -3 - 684 L-Cystine ABC transporter, permease protein TcyB - none -
fig|6666666.229907.peg.470 CDS AEJO02000010.1 37777 36998 -1 - 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229907.peg.471 CDS AEJO02000010.1 39198 37903 -3 - 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229907.peg.472 CDS AEJO02000010.1 40688 39324 -2 - 1365 lipoprotein, putative - none -
fig|6666666.229907.peg.473 CDS AEJO02000010.1 40857 40735 -3 - 123 hypothetical protein - none -
fig|6666666.229907.peg.474 CDS AEJO02000010.1 41051 41269 2 + 219 hypothetical protein - none -
fig|6666666.229907.peg.475 CDS AEJO02000010.1 42440 41478 -2 - 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229907.peg.476 CDS AEJO02000010.1 43143 42505 -3 - 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229907.peg.477 CDS AEJO02000010.1 43488 43189 -3 - 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229907.peg.478 CDS AEJO02000010.1 44751 43561 -3 - 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229907.peg.479 CDS AEJO02000010.1 45639 44782 -3 - 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229907.peg.480 CDS AEJO02000010.1 46803 45688 -3 - 1116 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229907.peg.481 CDS AEJO02000010.1 48757 46796 -1 - 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229907.peg.482 CDS AEJO02000010.1 49306 48770 -1 - 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229907.peg.483 CDS AEJO02000010.1 49605 49297 -3 - 309 Iojap protein - none -
fig|6666666.229907.peg.484 CDS AEJO02000010.1 50928 49672 -3 - 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229907.peg.485 CDS AEJO02000010.1 51253 52491 1 + 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229907.peg.486 CDS AEJO02000010.1 53851 52616 -1 - 1236 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229907.peg.487 CDS AEJO02000010.1 53931 54071 3 + 141 hypothetical protein - none -
fig|6666666.229907.peg.488 CDS AEJO02000010.1 54310 54080 -1 - 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.489 CDS AEJO02000010.1 55311 54583 -3 - 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229907.peg.490 CDS AEJO02000010.1 56274 55336 -3 - 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229907.peg.491 CDS AEJO02000010.1 57331 56381 -1 - 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229907.peg.492 CDS AEJO02000010.1 58397 57378 -2 - 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.493 CDS AEJO02000010.1 58594 58424 -1 - 171 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.229907.peg.494 CDS AEJO02000010.1 59135 58611 -2 - 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229907.peg.495 CDS AEJO02000010.1 59335 59207 -1 - 129 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229907.peg.496 CDS AEJO02000011.1 63 389 3 + 327 hypothetical protein - none -
fig|6666666.229907.peg.497 CDS AEJO02000011.1 539 2440 2 + 1902 hypothetical protein - none -
fig|6666666.229907.peg.498 CDS AEJO02000011.1 2440 3261 1 + 822 hypothetical protein - none -
fig|6666666.229907.peg.499 CDS AEJO02000011.1 3705 4028 3 + 324 hypothetical protein - none -
fig|6666666.229907.peg.500 CDS AEJO02000011.1 4035 4262 3 + 228 hypothetical protein - none -
fig|6666666.229907.peg.501 CDS AEJO02000011.1 6003 4594 -3 - 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229907.peg.502 CDS AEJO02000011.1 6073 6585 1 + 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229907.peg.503 CDS AEJO02000011.1 6679 6834 1 + 156 hypothetical protein - none -
fig|6666666.229907.peg.504 CDS AEJO02000011.1 6827 7108 2 + 282 hypothetical protein - none -
fig|6666666.229907.peg.505 CDS AEJO02000011.1 7111 7899 1 + 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229907.peg.506 CDS AEJO02000011.1 8393 7926 -2 - 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229907.peg.507 CDS AEJO02000011.1 11121 8995 -3 - 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229907.peg.508 CDS AEJO02000011.1 16740 11374 -3 - 5367 Autotransporter adhesin - none -
fig|6666666.229907.peg.509 CDS AEJO02000011.1 17607 17491 -3 - 117 hypothetical protein - none -
fig|6666666.229907.peg.510 CDS AEJO02000011.1 19411 17624 -1 - 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229907.peg.511 CDS AEJO02000011.1 19645 19466 -1 - 180 hypothetical protein - none -
fig|6666666.229907.peg.512 CDS AEJO02000011.1 19610 23086 2 + 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229907.peg.513 CDS AEJO02000011.1 23955 23161 -3 - 795 hypothetical protein - none -
fig|6666666.229907.peg.514 CDS AEJO02000011.1 26039 24021 -2 - 2019 hypothetical protein - none -
fig|6666666.229907.peg.515 CDS AEJO02000011.1 27357 26032 -3 - 1326 hypothetical protein - none -
fig|6666666.229907.peg.516 CDS AEJO02000011.1 29088 27634 -3 - 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229907.peg.517 CDS AEJO02000011.1 30927 29578 -3 - 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229907.peg.518 CDS AEJO02000011.1 32594 31218 -2 - 1377 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229907.peg.519 CDS AEJO02000011.1 33495 32707 -3 - 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229907.peg.520 CDS AEJO02000011.1 34186 35631 1 + 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229907.peg.521 CDS AEJO02000011.1 36077 36286 2 + 210 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.229907.peg.522 CDS AEJO02000011.1 37317 36391 -3 - 927 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229907.peg.523 CDS AEJO02000011.1 38271 37399 -3 - 873 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229907.peg.524 CDS AEJO02000011.1 39258 38293 -3 - 966 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229907.peg.525 CDS AEJO02000011.1 40763 39255 -2 - 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229907.peg.526 CDS AEJO02000011.1 40995 40774 -3 - 222 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229907.peg.527 CDS AEJO02000012.1 534 358 -3 - 177 Xanthine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions;
Xanthine Metabolism in Bacteria
fig|6666666.229907.peg.528 CDS AEJO02000012.1 837 709 -3 - 129 Xanthine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions;
Xanthine Metabolism in Bacteria
fig|6666666.229907.peg.529 CDS AEJO02000012.1 1011 889 -3 - 123 hypothetical protein - none -
fig|6666666.229907.peg.530 CDS AEJO02000012.1 1545 1381 -3 - 165 Xanthine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions;
Xanthine Metabolism in Bacteria
fig|6666666.229907.peg.531 CDS AEJO02000012.1 2746 2225 -1 - 522 Xanthine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions;
Xanthine Metabolism in Bacteria
fig|6666666.229907.peg.532 CDS AEJO02000012.1 2926 2768 -1 - 159 Xanthine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions;
Xanthine Metabolism in Bacteria
fig|6666666.229907.peg.533 CDS AEJO02000012.1 3313 3176 -1 - 138 hypothetical protein - none -
fig|6666666.229907.peg.534 CDS AEJO02000012.1 4088 3957 -2 - 132 hypothetical protein - none -
fig|6666666.229907.peg.535 CDS AEJO02000012.1 4485 4324 -3 - 162 Xanthine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions;
Xanthine Metabolism in Bacteria
fig|6666666.229907.peg.536 CDS AEJO02000012.1 4925 4809 -2 - 117 hypothetical protein - none -
fig|6666666.229907.peg.537 CDS AEJO02000012.1 5400 5221 -3 - 180 Xanthine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions;
Xanthine Metabolism in Bacteria
fig|6666666.229907.peg.538 CDS AEJO02000012.1 5514 5813 3 + 300 hypothetical protein - none -
fig|6666666.229907.peg.539 CDS AEJO02000012.1 6180 5893 -3 - 288 Xanthine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions;
Xanthine Metabolism in Bacteria
fig|6666666.229907.peg.540 CDS AEJO02000012.1 8394 6886 -3 - 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229907.peg.541 CDS AEJO02000012.1 9353 8451 -2 - 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229907.peg.542 CDS AEJO02000012.1 9633 9472 -3 - 162 hypothetical protein - none -
fig|6666666.229907.peg.543 CDS AEJO02000012.1 9717 10400 3 + 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229907.peg.544 CDS AEJO02000012.1 10413 12134 3 + 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229907.peg.545 CDS AEJO02000012.1 12167 12814 2 + 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229907.peg.546 CDS AEJO02000012.1 12831 13523 3 + 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229907.peg.547 CDS AEJO02000012.1 13702 14397 1 + 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229907.peg.548 CDS AEJO02000012.1 14404 14907 1 + 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229907.peg.549 CDS AEJO02000012.1 14907 15560 3 + 654 Substrate-specific component NikM of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229907.peg.550 CDS AEJO02000012.1 15557 16222 2 + 666 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229907.peg.551 CDS AEJO02000012.1 16219 16842 1 + 624 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229907.peg.552 CDS AEJO02000012.1 16921 17730 1 + 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229907.peg.553 CDS AEJO02000012.1 17757 18869 3 + 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229907.peg.554 CDS AEJO02000012.1 18869 19882 2 + 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229907.peg.555 CDS AEJO02000012.1 20327 21532 2 + 1206 hypothetical protein - none -
fig|6666666.229907.peg.556 CDS AEJO02000012.1 24368 23553 -2 - 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229907.peg.557 CDS AEJO02000012.1 25402 24518 -1 - 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229907.peg.558 CDS AEJO02000012.1 26644 25577 -1 - 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229907.peg.559 CDS AEJO02000012.1 27767 26649 -2 - 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229907.peg.560 CDS AEJO02000012.1 27904 29394 1 + 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229907.peg.561 CDS AEJO02000012.1 30600 29539 -3 - 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229907.peg.562 CDS AEJO02000012.1 31315 30587 -1 - 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229907.peg.563 CDS AEJO02000012.1 32158 31394 -1 - 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229907.peg.564 CDS AEJO02000012.1 32386 33165 1 + 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229907.peg.565 CDS AEJO02000012.1 33332 34729 2 + 1398 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229907.peg.566 CDS AEJO02000012.1 35392 34796 -1 - 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229907.peg.567 CDS AEJO02000012.1 36429 35401 -3 - 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229907.peg.568 CDS AEJO02000012.1 37562 36438 -2 - 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229907.peg.569 CDS AEJO02000012.1 38014 37562 -1 - 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229907.peg.570 CDS AEJO02000012.1 39192 38131 -3 - 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229907.peg.571 CDS AEJO02000012.1 40117 39212 -1 - 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229907.peg.572 CDS AEJO02000012.1 40579 41598 1 + 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229907.peg.573 CDS AEJO02000012.1 41577 41765 3 + 189 hypothetical protein - none -
fig|6666666.229907.peg.574 CDS AEJO02000012.1 41966 42706 2 + 741 FIG00698611: hypothetical protein - none -
fig|6666666.229907.peg.575 CDS AEJO02000012.1 43875 42862 -3 - 1014 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229907.peg.576 CDS AEJO02000012.1 44035 43913 -1 - 123 hypothetical protein - none -
fig|6666666.229907.peg.577 CDS AEJO02000012.1 44060 44527 2 + 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229907.peg.578 CDS AEJO02000012.1 44551 45438 1 + 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229907.peg.579 CDS AEJO02000012.1 45629 46210 2 + 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.580 CDS AEJO02000012.1 46210 46800 1 + 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.581 CDS AEJO02000012.1 46801 49029 1 + 2229 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.582 CDS AEJO02000012.1 49040 50119 2 + 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.583 CDS AEJO02000012.1 50126 50746 2 + 621 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.584 CDS AEJO02000012.1 50739 51524 3 + 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.585 CDS AEJO02000012.1 51671 52306 2 + 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229907.peg.586 CDS AEJO02000012.1 52331 53704 2 + 1374 sodium-dependent transporter - none -
fig|6666666.229907.peg.587 CDS AEJO02000012.1 54884 54099 -2 - 786 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229907.peg.588 CDS AEJO02000012.1 55669 54896 -1 - 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229907.peg.589 CDS AEJO02000012.1 55857 57389 3 + 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229907.peg.590 CDS AEJO02000012.1 58255 57497 -1 - 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229907.peg.591 CDS AEJO02000012.1 59190 58267 -3 - 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229907.peg.592 CDS AEJO02000012.1 60163 59198 -1 - 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229907.peg.593 CDS AEJO02000012.1 61122 60223 -3 - 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229907.peg.594 CDS AEJO02000012.1 61352 63328 2 + 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229907.peg.595 CDS AEJO02000012.1 64441 63524 -1 - 918 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229907.peg.596 CDS AEJO02000012.1 64769 64656 -2 - 114 hypothetical protein - none -
fig|6666666.229907.peg.597 CDS AEJO02000012.1 64813 65229 1 + 417 Protein ygiW precursor - none -
fig|6666666.229907.peg.598 CDS AEJO02000012.1 65367 65612 3 + 246 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229907.peg.599 CDS AEJO02000012.1 65581 66015 1 + 435 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229907.peg.600 CDS AEJO02000012.1 66015 67391 3 + 1377 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229907.peg.601 CDS AEJO02000012.1 69286 67517 -1 - 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229907.peg.602 CDS AEJO02000012.1 69764 69519 -2 - 246 FIG00696862: hypothetical protein - none -
fig|6666666.229907.peg.603 CDS AEJO02000012.1 71292 69955 -3 - 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229907.peg.604 CDS AEJO02000012.1 72207 71380 -3 - 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229907.peg.605 CDS AEJO02000012.1 72494 72378 -2 - 117 hypothetical protein - none -
fig|6666666.229907.peg.606 CDS AEJO02000012.1 72564 74147 3 + 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229907.peg.607 CDS AEJO02000012.1 74334 74684 3 + 351 YPPCP.09C homologue - none -
fig|6666666.229907.peg.608 CDS AEJO02000012.1 74681 74980 2 + 300 Putative transcriptional regulator - none -
fig|6666666.229907.peg.609 CDS AEJO02000012.1 77949 75016 -3 - 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229907.peg.610 CDS AEJO02000012.1 78149 80614 2 + 2466 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229907.peg.611 CDS AEJO02000012.1 80623 81402 1 + 780 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229907.peg.612 CDS AEJO02000012.1 81399 83432 3 + 2034 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229907.peg.613 CDS AEJO02000012.1 83454 84347 3 + 894 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229907.peg.614 CDS AEJO02000012.1 84523 85170 1 + 648 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229907.peg.615 CDS AEJO02000012.1 85233 87077 3 + 1845 hypothetical protein - none -
fig|6666666.229907.peg.616 CDS AEJO02000012.1 87125 88138 2 + 1014 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229907.peg.617 CDS AEJO02000012.1 88142 88435 2 + 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229907.peg.618 CDS AEJO02000012.1 91276 89000 -1 - 2277 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229907.peg.619 CDS AEJO02000012.1 91567 92499 1 + 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229907.peg.620 CDS AEJO02000012.1 92504 93232 2 + 729 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229907.peg.621 CDS AEJO02000012.1 93233 93565 2 + 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229907.peg.622 CDS AEJO02000012.1 96406 93632 -1 - 2775 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229907.peg.623 CDS AEJO02000012.1 98850 96484 -3 - 2367 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229907.peg.624 CDS AEJO02000012.1 99152 100036 2 + 885 Membrane protein LAPB - none -
fig|6666666.229907.peg.625 CDS AEJO02000012.1 100029 100706 3 + 678 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229907.peg.626 CDS AEJO02000012.1 100804 102450 1 + 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229907.peg.627 CDS AEJO02000012.1 102512 102799 2 + 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229907.peg.628 CDS AEJO02000012.1 102898 103194 1 + 297 Inner membrane protein yciS - none -
fig|6666666.229907.peg.629 CDS AEJO02000012.1 103194 104384 3 + 1191 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229907.peg.630 CDS AEJO02000012.1 104414 105106 2 + 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229907.peg.631 CDS AEJO02000012.1 105112 105429 1 + 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229907.peg.632 CDS AEJO02000012.1 105813 105463 -3 - 351 FIG00782386: hypothetical protein - none -
fig|6666666.229907.peg.633 CDS AEJO02000012.1 108544 105881 -1 - 2664 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229907.peg.634 CDS AEJO02000012.1 109152 108712 -3 - 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229907.peg.635 CDS AEJO02000012.1 109695 109171 -3 - 525 Flavodoxin 1 Flavodoxin
fig|6666666.229907.peg.636 CDS AEJO02000012.1 110915 110115 -2 - 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229907.peg.637 CDS AEJO02000012.1 111002 111619 2 + 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229907.peg.638 CDS AEJO02000012.1 111625 113040 1 + 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229907.peg.639 CDS AEJO02000012.1 113049 116372 3 + 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229907.peg.640 CDS AEJO02000012.1 116394 117467 3 + 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229907.peg.641 CDS AEJO02000012.1 117458 118360 2 + 903 Murein endopeptidase - none -
fig|6666666.229907.peg.642 CDS AEJO02000012.1 118364 119131 2 + 768 Putative membrane protein YfcA - none -
fig|6666666.229907.peg.643 CDS AEJO02000012.1 119247 120203 3 + 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229907.peg.644 CDS AEJO02000012.1 120225 120836 3 + 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229907.peg.645 CDS AEJO02000012.1 120869 122914 2 + 2046 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229907.peg.646 CDS AEJO02000012.1 122917 123807 1 + 891 hypothetical protein - none -
fig|6666666.229907.peg.647 CDS AEJO02000012.1 123936 124904 3 + 969 Glycosyltransferase - none -
fig|6666666.229907.peg.648 CDS AEJO02000012.1 124907 126448 2 + 1542 hypothetical protein - none -
fig|6666666.229907.peg.649 CDS AEJO02000012.1 126843 126490 -3 - 354 Putative translation initiation inhibitor, yjgF family - none -
fig|6666666.229907.peg.650 CDS AEJO02000012.1 126984 127661 3 + 678 FIG00904286: hypothetical protein - none -
fig|6666666.229907.peg.651 CDS AEJO02000012.1 127667 128377 2 + 711 hypothetical protein - none -
fig|6666666.229907.peg.652 CDS AEJO02000012.1 130044 128512 -3 - 1533 Na+/H+ antiporter - none -
fig|6666666.229907.peg.653 CDS AEJO02000012.1 130485 130883 3 + 399 DNA-binding protein H-NS - none -
fig|6666666.229907.peg.654 CDS AEJO02000012.1 130920 131789 3 + 870 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229907.peg.655 CDS AEJO02000012.1 131924 132553 2 + 630 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229907.peg.656 CDS AEJO02000012.1 132660 134612 3 + 1953 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229907.peg.657 CDS AEJO02000012.1 134709 135245 3 + 537 Putative transporting ATPase - none -
fig|6666666.229907.peg.658 CDS AEJO02000012.1 136429 135371 -1 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229907.peg.659 CDS AEJO02000012.1 138145 136451 -1 - 1695 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229907.peg.660 CDS AEJO02000012.1 139227 138148 -3 - 1080 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229907.peg.661 CDS AEJO02000012.1 140247 139249 -3 - 999 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229907.peg.662 CDS AEJO02000012.1 140621 141550 2 + 930 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229907.peg.663 CDS AEJO02000012.1 141587 141871 2 + 285 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229907.peg.664 CDS AEJO02000012.1 141868 143850 1 + 1983 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229907.peg.665 CDS AEJO02000012.1 143843 145093 2 + 1251 Phosphoglycerate transport system transcriptional regulatory protein PgtA Phosphoglycerate transport system
fig|6666666.229907.peg.666 CDS AEJO02000012.1 145984 145145 -1 - 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229907.peg.667 CDS AEJO02000012.1 146775 145993 -3 - 783 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229907.peg.668 CDS AEJO02000012.1 146883 147197 3 + 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229907.peg.669 CDS AEJO02000012.1 147194 147919 2 + 726 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229907.peg.670 CDS AEJO02000012.1 147959 148123 2 + 165 hypothetical protein - none -
fig|6666666.229907.peg.671 CDS AEJO02000012.1 148314 148523 3 + 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229907.peg.672 CDS AEJO02000012.1 149035 148589 -1 - 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229907.peg.673 CDS AEJO02000012.1 149182 150966 1 + 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229907.peg.674 CDS AEJO02000012.1 151109 151639 2 + 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229907.peg.675 CDS AEJO02000012.1 152064 152420 3 + 357 DsrE-related protein - none -
fig|6666666.229907.peg.676 CDS AEJO02000012.1 152452 156156 1 + 3705 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229907.peg.677 CDS AEJO02000012.1 156156 158135 3 + 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229907.peg.678 CDS AEJO02000012.1 158148 158744 3 + 597 hypothetical protein - none -
fig|6666666.229907.peg.679 CDS AEJO02000012.1 158986 159414 1 + 429 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.229907.peg.680 CDS AEJO02000012.1 159431 159823 2 + 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229907.peg.681 CDS AEJO02000012.1 159984 160769 3 + 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229907.peg.682 CDS AEJO02000012.1 160928 160782 -2 - 147 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.683 CDS AEJO02000012.1 161064 160912 -3 - 153 StbE replicon stabilization toxin - none -
fig|6666666.229907.peg.684 CDS AEJO02000012.1 161315 161061 -2 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.685 CDS AEJO02000012.1 162988 161531 -1 - 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229907.peg.686 CDS AEJO02000012.1 163218 163997 3 + 780 Protein of unknown function DUF419 - none -
fig|6666666.229907.peg.687 CDS AEJO02000012.1 166548 164068 -3 - 2481 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229907.peg.688 CDS AEJO02000012.1 167709 166609 -3 - 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229907.peg.689 CDS AEJO02000012.1 168015 169472 3 + 1458 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis;
tRNA modification Bacteria;
tRNA modification Bacteria
fig|6666666.229907.peg.690 CDS AEJO02000012.1 170257 169556 -1 - 702 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229907.peg.691 CDS AEJO02000012.1 170441 171433 2 + 993 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229907.peg.692 CDS AEJO02000014.1 16 837 1 + 822 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229907.peg.693 CDS AEJO02000014.1 859 2136 1 + 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229907.peg.694 CDS AEJO02000014.1 2147 2761 2 + 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229907.peg.695 CDS AEJO02000014.1 2814 3266 3 + 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229907.peg.696 CDS AEJO02000014.1 3976 3272 -1 - 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229907.peg.697 CDS AEJO02000014.1 3962 4099 2 + 138 hypothetical protein - none -
fig|6666666.229907.peg.698 CDS AEJO02000014.1 5349 4096 -3 - 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229907.peg.699 CDS AEJO02000014.1 6099 5473 -3 - 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229907.peg.700 CDS AEJO02000014.1 8081 6234 -2 - 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229907.peg.701 CDS AEJO02000014.1 10625 8208 -2 - 2418 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229907.peg.702 CDS AEJO02000014.1 11062 12816 1 + 1755 Putative sulfate permease - none -
fig|6666666.229907.peg.703 CDS AEJO02000014.1 13633 12842 -1 - 792 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229907.peg.704 CDS AEJO02000014.1 14724 13789 -3 - 936 hypothetical protein - none -
fig|6666666.229907.peg.705 CDS AEJO02000014.1 15934 14750 -1 - 1185 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229907.peg.706 CDS AEJO02000014.1 16709 15954 -2 - 756 Hexuronate utilization operon transcriptional repressor ExuR D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229907.peg.707 CDS AEJO02000014.1 19099 16724 -1 - 2376 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229907.peg.708 CDS AEJO02000014.1 20424 19123 -3 - 1302 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229907.peg.709 CDS AEJO02000014.1 21137 22129 2 + 993 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229907.peg.710 CDS AEJO02000014.1 22184 23128 2 + 945 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229907.peg.711 CDS AEJO02000014.1 23140 23985 1 + 846 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229907.peg.712 CDS AEJO02000014.1 23997 24515 3 + 519 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229907.peg.713 CDS AEJO02000014.1 24577 25401 1 + 825 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229907.peg.714 CDS AEJO02000014.1 25410 26051 3 + 642 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229907.peg.715 CDS AEJO02000014.1 27184 26138 -1 - 1047 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229907.peg.716 CDS AEJO02000014.1 28727 27495 -2 - 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229907.peg.717 CDS AEJO02000014.1 29403 28747 -3 - 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229907.peg.718 CDS AEJO02000014.1 30671 29502 -2 - 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229907.peg.719 CDS AEJO02000014.1 30994 30671 -1 - 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229907.peg.720 CDS AEJO02000014.1 31713 31033 -3 - 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229907.peg.721 CDS AEJO02000014.1 32068 31739 -1 - 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229907.peg.722 CDS AEJO02000014.1 32070 32225 3 + 156 hypothetical protein - none -
fig|6666666.229907.peg.723 CDS AEJO02000014.1 33605 32661 -2 - 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229907.peg.724 CDS AEJO02000014.1 34099 33605 -1 - 495 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229907.peg.725 CDS AEJO02000014.1 36953 34179 -2 - 2775 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229907.peg.726 CDS AEJO02000014.1 37287 37039 -3 - 249 FIG01055344: hypothetical protein - none -
fig|6666666.229907.peg.727 CDS AEJO02000014.1 37513 37271 -1 - 243 putative ORF-4 - none -
fig|6666666.229907.peg.728 CDS AEJO02000014.1 38445 37513 -3 - 933 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229907.peg.729 CDS AEJO02000014.1 40100 38523 -2 - 1578 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229907.peg.730 CDS AEJO02000014.1 40368 40631 3 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229907.peg.731 CDS AEJO02000014.1 41418 40741 -3 - 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229907.peg.732 CDS AEJO02000014.1 41494 42438 1 + 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229907.peg.733 CDS AEJO02000014.1 42449 42940 2 + 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229907.peg.734 CDS AEJO02000014.1 43069 43653 1 + 585 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229907.peg.735 CDS AEJO02000014.1 43842 44933 3 + 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229907.peg.736 CDS AEJO02000014.1 45269 45850 2 + 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229907.peg.737 CDS AEJO02000014.1 45922 46068 1 + 147 hypothetical protein - none -
fig|6666666.229907.peg.738 CDS AEJO02000014.1 46210 46323 1 + 114 hypothetical protein - none -
fig|6666666.229907.peg.739 CDS AEJO02000014.1 47235 46288 -3 - 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229907.peg.740 CDS AEJO02000014.1 48173 47349 -2 - 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229907.peg.741 CDS AEJO02000014.1 48314 49351 2 + 1038 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229907.peg.742 CDS AEJO02000014.1 49461 49348 -3 - 114 hypothetical protein - none -
fig|6666666.229907.peg.743 CDS AEJO02000014.1 49455 51470 3 + 2016 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229907.peg.744 CDS AEJO02000014.1 52117 51539 -1 - 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229907.peg.745 CDS AEJO02000014.1 52353 52120 -3 - 234 unknown - none -
fig|6666666.229907.peg.746 CDS AEJO02000014.1 53446 52418 -1 - 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ;
YrdC-YciO-Sua5 protein family
fig|6666666.229907.peg.747 CDS AEJO02000014.1 53462 53641 2 + 180 hypothetical protein - none -
fig|6666666.229907.peg.748 CDS AEJO02000014.1 53672 53887 2 + 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229907.peg.749 CDS AEJO02000014.1 54009 55766 3 + 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229907.peg.750 CDS AEJO02000014.1 55842 57692 3 + 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229907.peg.751 CDS AEJO02000015.1 565 443 -1 - 123 hypothetical protein - none -
fig|6666666.229907.peg.752 CDS AEJO02000015.1 1541 711 -2 - 831 hypothetical protein - none -
fig|6666666.229907.peg.753 CDS AEJO02000015.1 4385 1581 -2 - 2805 hypothetical protein - none -
fig|6666666.229907.peg.754 CDS AEJO02000015.1 5282 4392 -2 - 891 hypothetical protein - none -
fig|6666666.229907.peg.755 CDS AEJO02000015.1 6772 5837 -1 - 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229907.peg.756 CDS AEJO02000015.1 7431 6781 -3 - 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229907.peg.757 CDS AEJO02000015.1 8846 7470 -2 - 1377 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229907.peg.758 CDS AEJO02000015.1 8934 9530 3 + 597 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229907.peg.759 CDS AEJO02000015.1 9829 10794 1 + 966 PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229907.peg.760 CDS AEJO02000015.1 10812 11609 3 + 798 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229907.peg.761 CDS AEJO02000015.1 11623 12459 1 + 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229907.peg.762 CDS AEJO02000015.1 12569 13744 2 + 1176 Cof protein - none -
fig|6666666.229907.peg.763 CDS AEJO02000015.1 14035 15285 1 + 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism;
Xanthine Metabolism in Bacteria
fig|6666666.229907.peg.764 CDS AEJO02000015.1 15411 16130 3 + 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229907.peg.765 CDS AEJO02000015.1 16178 16291 2 + 114 hypothetical protein - none -
fig|6666666.229907.peg.766 CDS AEJO02000015.1 16433 18820 2 + 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229907.peg.767 CDS AEJO02000015.1 18836 20752 2 + 1917 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229907.peg.768 CDS AEJO02000015.1 20761 21996 1 + 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229907.peg.769 CDS AEJO02000015.1 21999 22292 3 + 294 AagD - none -
fig|6666666.229907.peg.770 CDS AEJO02000015.1 22382 22260 -2 - 123 hypothetical protein - none -
fig|6666666.229907.peg.771 CDS AEJO02000015.1 23735 22410 -2 - 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229907.peg.772 CDS AEJO02000015.1 23906 24538 2 + 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229907.peg.773 CDS AEJO02000015.1 24630 24490 -3 - 141 hypothetical protein - none -
fig|6666666.229907.peg.774 CDS AEJO02000016.1 855 169 -3 - 687 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229907.peg.775 CDS AEJO02000016.1 2078 855 -2 - 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229907.peg.776 CDS AEJO02000016.1 3480 2071 -3 - 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229907.peg.777 CDS AEJO02000016.1 4028 3507 -2 - 522 Type IV pilin PilA Type IV pilus
fig|6666666.229907.peg.778 CDS AEJO02000016.1 4081 4635 1 + 555 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229907.peg.779 CDS AEJO02000016.1 4995 5120 3 + 126 hypothetical protein - none -
fig|6666666.229907.peg.780 CDS AEJO02000016.1 5579 5109 -2 - 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229907.peg.781 CDS AEJO02000017.1 382 642 1 + 261 hypothetical protein - none -
fig|6666666.229907.peg.782 CDS AEJO02000017.1 651 1307 3 + 657 FIG00697418: hypothetical protein - none -
fig|6666666.229907.peg.783 CDS AEJO02000017.1 1309 3321 1 + 2013 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229907.peg.784 CDS AEJO02000017.1 3827 3411 -2 - 417 putative membrane protein - none -
fig|6666666.229907.peg.785 CDS AEJO02000017.1 3968 4933 2 + 966 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Bacteria
fig|6666666.229907.peg.786 CDS AEJO02000017.1 4950 5450 3 + 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229907.peg.787 CDS AEJO02000017.1 5456 6652 2 + 1197 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229907.peg.788 CDS AEJO02000017.1 6649 7029 1 + 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229907.peg.789 CDS AEJO02000017.1 8501 7071 -2 - 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229907.peg.790 CDS AEJO02000017.1 8615 9550 2 + 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229907.peg.791 CDS AEJO02000017.1 10171 9608 -1 - 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229907.peg.792 CDS AEJO02000017.1 10782 10171 -3 - 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229907.peg.793 CDS AEJO02000017.1 11237 10791 -2 - 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229907.peg.794 CDS AEJO02000017.1 12187 11261 -1 - 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229907.peg.795 CDS AEJO02000017.1 13527 12706 -3 - 822 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229907.peg.796 CDS AEJO02000017.1 15329 16711 2 + 1383 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229907.peg.797 CDS AEJO02000017.1 17956 16799 -1 - 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229907.peg.798 CDS AEJO02000017.1 19105 18023 -1 - 1083 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229907.peg.799 CDS AEJO02000017.1 19654 19106 -1 - 549 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229907.peg.800 CDS AEJO02000017.1 20254 19697 -1 - 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229907.peg.801 CDS AEJO02000017.1 21008 20286 -2 - 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229907.peg.802 CDS AEJO02000017.1 22948 21011 -1 - 1938 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229907.peg.803 CDS AEJO02000017.1 23024 23842 2 + 819 Aldose 1-epimerase - none -
fig|6666666.229907.peg.804 CDS AEJO02000017.1 23988 24101 3 + 114 hypothetical protein - none -
fig|6666666.229907.peg.805 CDS AEJO02000017.1 25028 24126 -2 - 903 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229907.peg.806 CDS AEJO02000017.1 26397 25114 -3 - 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229907.peg.807 CDS AEJO02000017.1 27592 26474 -1 - 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229907.peg.808 CDS AEJO02000017.1 27623 27736 2 + 114 hypothetical protein - none -
fig|6666666.229907.peg.809 CDS AEJO02000017.1 28048 29238 1 + 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229907.peg.810 CDS AEJO02000017.1 29207 29338 2 + 132 hypothetical protein - none -
fig|6666666.229907.peg.811 CDS AEJO02000017.1 29362 30900 1 + 1539 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229907.peg.812 CDS AEJO02000017.1 30922 31812 1 + 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229907.peg.813 CDS AEJO02000017.1 31906 33672 1 + 1767 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229907.peg.814 CDS AEJO02000017.1 33710 33925 2 + 216 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229907.peg.815 CDS AEJO02000017.1 35025 33985 -3 - 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229907.peg.816 CDS AEJO02000017.1 37039 35009 -1 - 2031 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229907.peg.817 CDS AEJO02000017.1 38119 37091 -1 - 1029 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229907.peg.818 CDS AEJO02000017.1 38291 38130 -2 - 162 hypothetical protein - none -
fig|6666666.229907.peg.819 CDS AEJO02000017.1 38333 39865 2 + 1533 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System
fig|6666666.229907.peg.820 CDS AEJO02000017.1 40168 42438 1 + 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229907.peg.821 CDS AEJO02000017.1 43081 44211 1 + 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229907.peg.822 CDS AEJO02000017.1 44571 44819 3 + 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229907.peg.823 CDS AEJO02000017.1 45798 44986 -3 - 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229907.peg.824 CDS AEJO02000017.1 46443 45820 -3 - 624 L-lysine permease - none -
fig|6666666.229907.peg.825 CDS AEJO02000017.1 46943 46452 -2 - 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229907.peg.826 CDS AEJO02000017.1 47936 46953 -2 - 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229907.peg.827 CDS AEJO02000017.1 48380 47955 -2 - 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229907.peg.828 CDS AEJO02000017.1 48860 48387 -2 - 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229907.peg.829 CDS AEJO02000017.1 49103 49987 2 + 885 hypothetical protein - none -
fig|6666666.229907.peg.830 CDS AEJO02000017.1 51957 50308 -3 - 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229907.peg.831 CDS AEJO02000017.1 53055 51973 -3 - 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229907.peg.832 CDS AEJO02000017.1 54485 53079 -2 - 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229907.peg.833 CDS AEJO02000017.1 54518 54655 2 + 138 hypothetical protein - none -
fig|6666666.229907.peg.834 CDS AEJO02000017.1 55743 54664 -3 - 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229907.peg.835 CDS AEJO02000017.1 57094 55844 -1 - 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229907.peg.836 CDS AEJO02000017.1 57780 57094 -3 - 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229907.peg.837 CDS AEJO02000017.1 58979 57795 -2 - 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229907.peg.838 CDS AEJO02000017.1 60412 59546 -1 - 867 hypothetical protein - none -
fig|6666666.229907.peg.839 CDS AEJO02000018.1 2943 112 -3 - 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229907.peg.840 CDS AEJO02000018.1 3113 3598 2 + 486 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229907.peg.841 CDS AEJO02000018.1 3748 5025 1 + 1278 putative site specific recombinase - none -
fig|6666666.229907.peg.842 CDS AEJO02000018.1 5015 6535 2 + 1521 putative enzyme; Integration, recombination (Phage or Prophage Related) - none -
fig|6666666.229907.peg.843 CDS AEJO02000018.1 6538 8580 1 + 2043 FIG00638563: hypothetical protein - none -
fig|6666666.229907.peg.844 CDS AEJO02000018.1 8582 8992 2 + 411 Transposase and inactivated derivatives - none -
fig|6666666.229907.peg.845 CDS AEJO02000018.1 9722 9585 -2 - 138 hypothetical protein - none -
fig|6666666.229907.peg.846 CDS AEJO02000018.1 9860 10081 2 + 222 Aldo-keto reductase - none -
fig|6666666.229907.peg.847 CDS AEJO02000018.1 10116 10700 3 + 585 Flavodoxin Flavodoxin
fig|6666666.229907.peg.848 CDS AEJO02000018.1 10781 12433 2 + 1653 Carboxylesterase type B - none -
fig|6666666.229907.peg.849 CDS AEJO02000018.1 12697 12578 -1 - 120 hypothetical protein - none -
fig|6666666.229907.peg.850 CDS AEJO02000018.1 14865 12946 -3 - 1920 hypothetical protein - none -
fig|6666666.229907.peg.851 CDS AEJO02000018.1 16318 15428 -1 - 891 FIG00698198: hypothetical protein - none -
fig|6666666.229907.peg.852 CDS AEJO02000018.1 16447 16653 1 + 207 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229907.peg.853 CDS AEJO02000018.1 17022 16792 -3 - 231 COG0488: ATPase components of ABC transporters with duplicated ATPase domains - none -
fig|6666666.229907.peg.854 CDS AEJO02000018.1 17056 17226 1 + 171 Putative exported protein precursor - none -
fig|6666666.229907.peg.855 CDS AEJO02000018.1 18181 17615 -1 - 567 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229907.peg.856 CDS AEJO02000018.1 20566 18395 -1 - 2172 Hypothetical SecA-related protein - none -
fig|6666666.229907.peg.857 CDS AEJO02000018.1 20733 20921 3 + 189 hypothetical protein - none -
fig|6666666.229907.peg.858 CDS AEJO02000018.1 21551 21318 -2 - 234 hypothetical protein - none -
fig|6666666.229907.peg.859 CDS AEJO02000018.1 22433 21609 -2 - 825 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.229907.peg.860 CDS AEJO02000018.1 22581 23024 3 + 444 Transcriptional regulator, MarR family - none -
fig|6666666.229907.peg.861 CDS AEJO02000018.1 23024 23326 2 + 303 probable integral membrane protein NMA1777 - none -
fig|6666666.229907.peg.862 CDS AEJO02000018.1 23377 23904 1 + 528 probable integral membrane protein NMA1777 - none -
fig|6666666.229907.peg.863 CDS AEJO02000018.1 24997 24143 -1 - 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229907.peg.864 CDS AEJO02000018.1 26088 25000 -3 - 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229907.peg.865 CDS AEJO02000018.1 26639 26112 -2 - 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229907.peg.866 CDS AEJO02000018.1 28262 26853 -2 - 1410 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229907.peg.867 CDS AEJO02000018.1 28675 28283 -1 - 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229907.peg.868 CDS AEJO02000018.1 29199 28675 -3 - 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229907.peg.869 CDS AEJO02000018.1 29714 29196 -2 - 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229907.peg.870 CDS AEJO02000018.1 30534 29725 -3 - 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229907.peg.871 CDS AEJO02000018.1 30668 33235 2 + 2568 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229907.peg.872 CDS AEJO02000018.1 33331 34176 1 + 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229907.peg.873 CDS AEJO02000018.1 34271 35641 2 + 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229907.peg.874 CDS AEJO02000018.1 36418 35774 -1 - 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229907.peg.875 CDS AEJO02000018.1 36674 36456 -2 - 219 FIG00696234: hypothetical protein - none -
fig|6666666.229907.peg.876 CDS AEJO02000018.1 37297 36698 -1 - 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229907.peg.877 CDS AEJO02000018.1 37752 37297 -3 - 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229907.peg.878 CDS AEJO02000018.1 39020 37821 -2 - 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229907.peg.879 CDS AEJO02000018.1 39019 39150 1 + 132 hypothetical protein - none -
fig|6666666.229907.peg.880 CDS AEJO02000018.1 39198 39857 3 + 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229907.peg.881 CDS AEJO02000018.1 40129 40302 1 + 174 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.229907.peg.882 CDS AEJO02000018.1 40314 40484 3 + 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229907.peg.883 CDS AEJO02000018.1 40524 41381 3 + 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229907.peg.884 CDS AEJO02000018.1 42436 41384 -1 - 1053 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229907.peg.885 CDS AEJO02000018.1 43468 42446 -1 - 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229907.peg.886 CDS AEJO02000018.1 44161 43469 -1 - 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229907.peg.887 CDS AEJO02000018.1 44436 44224 -3 - 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229907.peg.888 CDS AEJO02000018.1 44694 45542 3 + 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229907.peg.889 CDS AEJO02000018.1 45551 46555 2 + 1005 putative capsular polysaccharide synthesis protein - none -
fig|6666666.229907.peg.890 CDS AEJO02000018.1 47425 46562 -1 - 864 Involved in lipopolysaccharide biosynthesis - none -
fig|6666666.229907.peg.891 CDS AEJO02000018.1 47610 49850 3 + 2241 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229907.peg.892 CDS AEJO02000018.1 49960 50793 1 + 834 Cell division protein - none -
fig|6666666.229907.peg.893 CDS AEJO02000018.1 50994 51560 3 + 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229907.peg.894 CDS AEJO02000018.1 51586 52782 1 + 1197 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229907.peg.895 CDS AEJO02000018.1 52796 55894 2 + 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229907.peg.896 CDS AEJO02000018.1 56048 56848 2 + 801 Orf2 - none -
fig|6666666.229907.peg.897 CDS AEJO02000018.1 57526 56867 -1 - 660 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229907.peg.898 CDS AEJO02000018.1 57898 57542 -1 - 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229907.peg.899 CDS AEJO02000018.1 60154 57923 -1 - 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229907.peg.900 CDS AEJO02000018.1 61480 60164 -1 - 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229907.peg.901 CDS AEJO02000018.1 62168 61482 -2 - 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229907.peg.902 CDS AEJO02000018.1 63324 62476 -3 - 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229907.peg.903 CDS AEJO02000018.1 63430 63317 -1 - 114 hypothetical protein - none -
fig|6666666.229907.peg.904 CDS AEJO02000018.1 64201 63479 -1 - 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229907.peg.905 CDS AEJO02000018.1 64665 64276 -3 - 390 Patatin-like phospholipase - none -
fig|6666666.229907.peg.906 CDS AEJO02000018.1 65671 64784 -1 - 888 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229907.peg.907 CDS AEJO02000018.1 66562 65699 -1 - 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229907.peg.908 CDS AEJO02000018.1 66680 67396 2 + 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229907.peg.909 CDS AEJO02000018.1 67406 68050 2 + 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229907.peg.910 CDS AEJO02000018.1 68132 69007 2 + 876 DnaJ-like protein DjlA - none -
fig|6666666.229907.peg.911 CDS AEJO02000018.1 69011 69979 2 + 969 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229907.peg.912 CDS AEJO02000018.1 71058 70000 -3 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229907.peg.913 CDS AEJO02000018.1 72594 71074 -3 - 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229907.peg.914 CDS AEJO02000018.1 73673 72675 -2 - 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229907.peg.915 CDS AEJO02000018.1 74233 73892 -1 - 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229907.peg.916 CDS AEJO02000018.1 75030 74263 -3 - 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229907.peg.917 CDS AEJO02000018.1 75128 76387 2 + 1260 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229907.peg.918 CDS AEJO02000018.1 76365 76643 3 + 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229907.peg.919 CDS AEJO02000018.1 76646 77725 2 + 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229907.peg.920 CDS AEJO02000018.1 78119 78244 2 + 126 hypothetical protein - none -
fig|6666666.229907.peg.921 CDS AEJO02000018.1 78818 78225 -2 - 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229907.peg.922 CDS AEJO02000018.1 78916 79233 1 + 318 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229907.peg.923 CDS AEJO02000018.1 79243 79359 1 + 117 hypothetical protein - none -
fig|6666666.229907.peg.924 CDS AEJO02000018.1 79397 79564 2 + 168 hypothetical protein - none -
fig|6666666.229907.peg.925 CDS AEJO02000018.1 79589 80929 2 + 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.926 CDS AEJO02000018.1 80932 82167 1 + 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.927 CDS AEJO02000018.1 82160 82945 2 + 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.928 CDS AEJO02000018.1 82945 83574 1 + 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.929 CDS AEJO02000018.1 83578 84174 1 + 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.930 CDS AEJO02000018.1 84186 85421 3 + 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.931 CDS AEJO02000018.1 85426 85575 1 + 150 hypothetical protein - none -
fig|6666666.229907.peg.932 CDS AEJO02000018.1 85572 86660 3 + 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229907.peg.933 CDS AEJO02000018.1 86739 86996 3 + 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229907.peg.934 CDS AEJO02000018.1 87257 88408 2 + 1152 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229907.peg.935 CDS AEJO02000018.1 88639 88779 1 + 141 hypothetical protein - none -
fig|6666666.229907.peg.936 CDS AEJO02000018.1 89048 90358 2 + 1311 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.229907.peg.937 CDS AEJO02000018.1 90874 90455 -1 - 420 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.229907.peg.938 CDS AEJO02000018.1 91431 90874 -3 - 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229907.peg.939 CDS AEJO02000018.1 92183 91449 -2 - 735 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229907.peg.940 CDS AEJO02000018.1 92182 92313 1 + 132 hypothetical protein - none -
fig|6666666.229907.peg.941 CDS AEJO02000018.1 92587 92270 -1 - 318 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229907.peg.942 CDS AEJO02000018.1 93629 92742 -2 - 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229907.peg.943 CDS AEJO02000018.1 95024 93705 -2 - 1320 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229907.peg.944 CDS AEJO02000018.1 95283 95101 -3 - 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229907.peg.945 CDS AEJO02000018.1 98030 95406 -2 - 2625 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229907.peg.946 CDS AEJO02000018.1 98655 98230 -3 - 426 Universal stress protein A Universal stress protein family
fig|6666666.229907.peg.947 CDS AEJO02000018.1 98837 99631 2 + 795 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229907.peg.948 CDS AEJO02000018.1 100719 99730 -3 - 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229907.peg.949 CDS AEJO02000018.1 100705 100842 1 + 138 hypothetical protein - none -
fig|6666666.229907.peg.950 CDS AEJO02000018.1 102718 100979 -1 - 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229907.peg.951 CDS AEJO02000018.1 102986 102729 -2 - 258 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229907.peg.952 CDS AEJO02000018.1 103079 104104 2 + 1026 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229907.peg.953 CDS AEJO02000018.1 104170 104583 1 + 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229907.peg.954 CDS AEJO02000018.1 104625 105320 3 + 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229907.peg.955 CDS AEJO02000018.1 105365 106753 2 + 1389 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229907.peg.956 CDS AEJO02000018.1 108017 106809 -2 - 1209 Sodium/glutamate symport protein - none -
fig|6666666.229907.peg.957 CDS AEJO02000018.1 108617 108183 -2 - 435 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229907.peg.958 CDS AEJO02000018.1 109444 108614 -1 - 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229907.peg.959 CDS AEJO02000018.1 109914 109441 -3 - 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229907.peg.960 CDS AEJO02000018.1 110585 109917 -2 - 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229907.peg.961 CDS AEJO02000018.1 110711 112210 2 + 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229907.peg.962 CDS AEJO02000018.1 112548 113363 3 + 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229907.peg.963 CDS AEJO02000018.1 114345 113452 -3 - 894 Transcriptional regulator, LysR family - none -
fig|6666666.229907.peg.964 CDS AEJO02000018.1 114528 115274 3 + 747 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229907.peg.965 CDS AEJO02000018.1 115437 116417 3 + 981 Aldo-keto reductase - none -
fig|6666666.229907.peg.966 CDS AEJO02000018.1 116643 116927 3 + 285 Carboxylesterase type B - none -
fig|6666666.229907.peg.967 CDS AEJO02000018.1 116960 118294 2 + 1335 Carboxylesterase type B - none -
fig|6666666.229907.peg.968 CDS AEJO02000018.1 118431 119540 3 + 1110 Putative exported protein precursor - none -
fig|6666666.229907.peg.969 CDS AEJO02000018.1 120569 119679 -2 - 891 Transcriptional regulator, LysR family - none -
fig|6666666.229907.peg.970 CDS AEJO02000018.1 120669 121733 3 + 1065 FIG01220323: hypothetical protein - none -
fig|6666666.229907.peg.971 CDS AEJO02000018.1 123717 121885 -3 - 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229907.peg.972 CDS AEJO02000018.1 124568 123771 -2 - 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229907.peg.973 CDS AEJO02000018.1 124966 124694 -1 - 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229907.peg.974 CDS AEJO02000018.1 125723 125133 -2 - 591 FIG01200173: hypothetical protein - none -
fig|6666666.229907.peg.975 CDS AEJO02000018.1 126805 125741 -1 - 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229907.peg.976 CDS AEJO02000018.1 127602 126802 -3 - 801 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229907.peg.977 CDS AEJO02000018.1 128383 127739 -1 - 645 converved hypothetical protein - none -
fig|6666666.229907.peg.978 CDS AEJO02000018.1 128641 130257 1 + 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.229907.peg.979 CDS AEJO02000018.1 131869 130322 -1 - 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229907.peg.980 CDS AEJO02000018.1 135753 131872 -3 - 3882 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229907.peg.981 CDS AEJO02000018.1 137640 135781 -3 - 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229907.peg.982 CDS AEJO02000018.1 138337 137708 -1 - 630 Nitrate/nitrite response regulator protein - none -
fig|6666666.229907.peg.983 CDS AEJO02000018.1 140848 138347 -1 - 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229907.peg.984 CDS AEJO02000018.1 140947 141930 1 + 984 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229907.peg.985 CDS AEJO02000018.1 141943 142689 1 + 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229907.peg.986 CDS AEJO02000018.1 142718 144103 2 + 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229907.peg.987 CDS AEJO02000018.1 144116 145366 2 + 1251 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229907.peg.988 CDS AEJO02000018.1 146170 145433 -1 - 738 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229907.peg.989 CDS AEJO02000018.1 146432 146713 2 + 282 hypothetical protein - none -
fig|6666666.229907.peg.990 CDS AEJO02000018.1 146899 147486 1 + 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229907.peg.991 CDS AEJO02000018.1 148257 147775 -3 - 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229907.peg.992 CDS AEJO02000018.1 148408 148602 1 + 195 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229907.peg.993 CDS AEJO02000018.1 149590 148991 -1 - 600 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229907.peg.994 CDS AEJO02000018.1 151071 149602 -3 - 1470 Sodium-dependent transporter - none -
fig|6666666.229907.peg.995 CDS AEJO02000018.1 151181 152068 2 + 888 RuBisCO operon transcriptional regulator CO2 uptake, carboxysome
fig|6666666.229907.peg.996 CDS AEJO02000019.1 6 260 3 + 255 hypothetical protein - none -
fig|6666666.229907.peg.997 CDS AEJO02000019.1 304 1101 1 + 798 Carboxypeptidase - none -
fig|6666666.229907.peg.998 CDS AEJO02000019.1 1092 1802 3 + 711 hypothetical protein - none -
fig|6666666.229907.peg.999 CDS AEJO02000019.1 1985 2929 2 + 945 hypothetical protein - none -
fig|6666666.229907.peg.1000 CDS AEJO02000019.1 3496 4128 1 + 633 hypothetical protein - none -
fig|6666666.229907.peg.1001 CDS AEJO02000019.1 5419 5559 1 + 141 hypothetical protein - none -
fig|6666666.229907.peg.1002 CDS AEJO02000019.1 5711 5577 -2 - 135 Mobile element protein - none -
fig|6666666.229907.peg.1003 CDS AEJO02000019.1 6024 5890 -3 - 135 hypothetical protein - none -
fig|6666666.229907.peg.1004 CDS AEJO02000019.1 6327 6506 3 + 180 hypothetical protein - none -
fig|6666666.229907.peg.1005 CDS AEJO02000019.1 8558 7335 -2 - 1224 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229907.peg.1006 CDS AEJO02000019.1 9924 8620 -3 - 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229907.peg.1007 CDS AEJO02000019.1 10811 10110 -2 - 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229907.peg.1008 CDS AEJO02000019.1 10832 11530 2 + 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229907.peg.1009 CDS AEJO02000019.1 13081 11588 -1 - 1494 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229907.peg.1010 CDS AEJO02000019.1 13607 13323 -2 - 285 FIG00904093: hypothetical protein - none -
fig|6666666.229907.peg.1011 CDS AEJO02000019.1 13783 14988 1 + 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229907.peg.1012 CDS AEJO02000019.1 15084 16841 3 + 1758 FIG00696060: hypothetical protein - none -
fig|6666666.229907.peg.1013 CDS AEJO02000019.1 17017 17427 1 + 411 probable membrane protein YPO3565 - none -
fig|6666666.229907.peg.1014 CDS AEJO02000019.1 17555 17385 -2 - 171 hypothetical protein - none -
fig|6666666.229907.peg.1015 CDS AEJO02000019.1 17618 19000 2 + 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229907.peg.1016 CDS AEJO02000019.1 20261 19191 -2 - 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229907.peg.1017 CDS AEJO02000019.1 22530 20488 -3 - 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229907.peg.1018 CDS AEJO02000019.1 24173 23142 -2 - 1032 putative membrane protein - none -
fig|6666666.229907.peg.1019 CDS AEJO02000019.1 24853 24188 -1 - 666 putative exported protein - none -
fig|6666666.229907.peg.1020 CDS AEJO02000019.1 25190 26902 2 + 1713 ABC transporter ATP-binding protein - none -
fig|6666666.229907.peg.1021 CDS AEJO02000019.1 27893 27006 -2 - 888 putative adhesin/invasin - none -
fig|6666666.229907.peg.1022 CDS AEJO02000019.1 28456 30282 1 + 1827 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229907.peg.1023 CDS AEJO02000019.1 30732 30866 3 + 135 hypothetical protein - none -
fig|6666666.229907.peg.1024 CDS AEJO02000019.1 30874 33129 1 + 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229907.peg.1025 CDS AEJO02000019.1 33413 34024 2 + 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229907.peg.1026 CDS AEJO02000019.1 34913 34089 -2 - 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229907.peg.1027 CDS AEJO02000019.1 36161 35103 -2 - 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229907.peg.1028 CDS AEJO02000019.1 36354 36944 3 + 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229907.peg.1029 CDS AEJO02000019.1 38375 37038 -2 - 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229907.peg.1030 CDS AEJO02000019.1 40141 38552 -1 - 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229907.peg.1031 CDS AEJO02000019.1 41259 40411 -3 - 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229907.peg.1032 CDS AEJO02000019.1 41336 43054 2 + 1719 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229907.peg.1033 CDS AEJO02000019.1 43064 43423 2 + 360 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229907.peg.1034 CDS AEJO02000019.1 43436 44020 2 + 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229907.peg.1035 CDS AEJO02000019.1 44085 44672 3 + 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229907.peg.1036 CDS AEJO02000019.1 45470 44778 -2 - 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229907.peg.1037 CDS AEJO02000019.1 45687 46757 3 + 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229907.peg.1038 CDS AEJO02000019.1 46761 47402 3 + 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229907.peg.1039 CDS AEJO02000019.1 47417 47899 2 + 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229907.peg.1040 CDS AEJO02000019.1 48225 48031 -3 - 195 Mobile element protein - none -
fig|6666666.229907.peg.1041 CDS AEJO02000019.1 48390 48256 -3 - 135 Mobile element protein - none -
fig|6666666.229907.peg.1042 CDS AEJO02000019.1 48600 48397 -3 - 204 Mobile element protein - none -
fig|6666666.229907.peg.1043 CDS AEJO02000019.1 49183 49037 -1 - 147 hypothetical protein - none -
fig|6666666.229907.peg.1044 CDS AEJO02000019.1 49277 50629 2 + 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229907.peg.1045 CDS AEJO02000019.1 50659 50844 1 + 186 hypothetical protein - none -
fig|6666666.229907.peg.1046 CDS AEJO02000019.1 50884 51156 1 + 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.1047 CDS AEJO02000019.1 51168 51434 3 + 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.1048 CDS AEJO02000019.1 51466 53025 1 + 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229907.peg.1049 CDS AEJO02000019.1 53582 53418 -2 - 165 hypothetical protein - none -
fig|6666666.229907.peg.1050 CDS AEJO02000019.1 54367 53579 -1 - 789 hypothetical protein - none -
fig|6666666.229907.peg.1051 CDS AEJO02000019.1 56149 57102 1 + 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229907.peg.1052 CDS AEJO02000019.1 57165 58022 3 + 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229907.peg.1053 CDS AEJO02000019.1 58054 59400 1 + 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229907.peg.1054 CDS AEJO02000019.1 60759 59428 -3 - 1332 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229907.peg.1055 CDS AEJO02000019.1 61270 60884 -1 - 387 Integral membrane protein - none -
fig|6666666.229907.peg.1056 CDS AEJO02000019.1 61464 62480 3 + 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229907.peg.1057 CDS AEJO02000019.1 62486 62827 2 + 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229907.peg.1058 CDS AEJO02000019.1 62834 64123 2 + 1290 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229907.peg.1059 CDS AEJO02000019.1 64256 64900 2 + 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229907.peg.1060 CDS AEJO02000019.1 64987 65100 1 + 114 hypothetical protein - none -
fig|6666666.229907.peg.1061 CDS AEJO02000019.1 66721 65348 -1 - 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229907.peg.1062 CDS AEJO02000019.1 67878 66724 -3 - 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229907.peg.1063 CDS AEJO02000019.1 68043 68723 3 + 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229907.peg.1064 CDS AEJO02000019.1 68749 70014 1 + 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229907.peg.1065 CDS AEJO02000019.1 70083 70694 3 + 612 SH3 domain protein - none -
fig|6666666.229907.peg.1066 CDS AEJO02000019.1 70694 71971 2 + 1278 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229907.peg.1067 CDS AEJO02000019.1 72033 72659 3 + 627 Outer membrane lipoprotein LolB A Gammaproteobacteria Cluster Relating to Translation;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229907.peg.1068 CDS AEJO02000019.1 72656 73567 2 + 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229907.peg.1069 CDS AEJO02000019.1 73608 74558 3 + 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229907.peg.1070 CDS AEJO02000019.1 74735 74881 2 + 147 hypothetical protein - none -
fig|6666666.229907.peg.1071 CDS AEJO02000019.1 75182 76327 2 + 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229907.peg.1072 CDS AEJO02000019.1 76570 78159 1 + 1590 L-lactate permease Lactate utilization
fig|6666666.229907.peg.1073 CDS AEJO02000019.1 78646 78314 -1 - 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229907.peg.1074 CDS AEJO02000019.1 78671 78787 2 + 117 hypothetical protein - none -
fig|6666666.229907.peg.1075 CDS AEJO02000019.1 78846 79928 3 + 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229907.peg.1076 CDS AEJO02000019.1 80003 80770 2 + 768 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229907.peg.1077 CDS AEJO02000019.1 80742 81101 3 + 360 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229907.peg.1078 CDS AEJO02000019.1 81112 82443 1 + 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229907.peg.1079 CDS AEJO02000019.1 82998 82531 -3 - 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229907.peg.1080 CDS AEJO02000019.1 83066 83827 2 + 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229907.peg.1081 CDS AEJO02000019.1 84279 84533 3 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.1082 CDS AEJO02000019.1 84523 84813 1 + 291 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.1083 CDS AEJO02000019.1 85213 84875 -1 - 339 conserved hypothetical protein - none -
fig|6666666.229907.peg.1084 CDS AEJO02000019.1 85554 85997 3 + 444 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229907.peg.1085 CDS AEJO02000019.1 86169 87557 3 + 1389 Putative protease - none -
fig|6666666.229907.peg.1086 CDS AEJO02000019.1 87679 87792 1 + 114 hypothetical protein - none -
fig|6666666.229907.peg.1087 CDS AEJO02000019.1 88076 88966 2 + 891 transcriptional regulator, putative - none -
fig|6666666.229907.peg.1088 CDS AEJO02000019.1 89107 89391 1 + 285 hypothetical protein - none -
fig|6666666.229907.peg.1089 CDS AEJO02000019.1 89403 90476 3 + 1074 FIG00697578: hypothetical protein - none -
fig|6666666.229907.peg.1090 CDS AEJO02000019.1 90523 92178 1 + 1656 FIG00698381: hypothetical protein - none -
fig|6666666.229907.peg.1091 CDS AEJO02000019.1 92570 93916 2 + 1347 FIG00849539: hypothetical protein - none -
fig|6666666.229907.peg.1092 CDS AEJO02000019.1 94189 94599 1 + 411 ABC-type Fe3+-hydroxamate transport system, periplasmic component - none -
fig|6666666.229907.peg.1093 CDS AEJO02000019.1 94716 95255 3 + 540 hypothetical protein - none -
fig|6666666.229907.peg.1094 CDS AEJO02000019.1 95346 96437 3 + 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229907.peg.1095 CDS AEJO02000019.1 97617 96481 -3 - 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229907.peg.1096 CDS AEJO02000021.1 600 10 -3 - 591 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229907.peg.1097 CDS AEJO02000021.1 1577 612 -2 - 966 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229907.peg.1098 CDS AEJO02000021.1 1680 2246 3 + 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229907.peg.1099 CDS AEJO02000021.1 2402 3346 2 + 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229907.peg.1100 CDS AEJO02000021.1 3564 3842 3 + 279 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229907.peg.1101 CDS AEJO02000021.1 4985 4110 -2 - 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229907.peg.1102 CDS AEJO02000021.1 5225 7156 2 + 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229907.peg.1103 CDS AEJO02000022.1 2377 854 -1 - 1524 putative flippase - none -
fig|6666666.229907.peg.1104 CDS AEJO02000022.1 2508 3284 3 + 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229907.peg.1105 CDS AEJO02000022.1 3293 4483 2 + 1191 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229907.peg.1106 CDS AEJO02000022.1 4483 5364 1 + 882 Glycosyltransferase - none -
fig|6666666.229907.peg.1107 CDS AEJO02000022.1 5433 6242 3 + 810 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229907.peg.1108 CDS AEJO02000022.1 6377 6231 -2 - 147 hypothetical protein - none -
fig|6666666.229907.peg.1109 CDS AEJO02000022.1 6244 7374 1 + 1131 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229907.peg.1110 CDS AEJO02000022.1 7444 8511 1 + 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229907.peg.1111 CDS AEJO02000022.1 8589 9461 3 + 873 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229907.peg.1112 CDS AEJO02000022.1 9463 10341 1 + 879 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229907.peg.1113 CDS AEJO02000022.1 10344 10886 3 + 543 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229907.peg.1114 CDS AEJO02000022.1 10986 11771 3 + 786 O-antigen export system permease protein RfbD - none -
fig|6666666.229907.peg.1115 CDS AEJO02000022.1 11784 12521 3 + 738 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) Rhamnose containing glycans
fig|6666666.229907.peg.1116 CDS AEJO02000022.1 12533 13714 2 + 1182 hypothetical protein - none -
fig|6666666.229907.peg.1117 CDS AEJO02000022.1 13725 15854 3 + 2130 hypothetical protein - none -
fig|6666666.229907.peg.1118 CDS AEJO02000022.1 16239 16943 3 + 705 Glycosyltransferase involved in cell wall biogenesis (EC 2.4.-.-) - none -
fig|6666666.229907.peg.1119 CDS AEJO02000022.1 17316 18185 3 + 870 Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.229907.peg.1120 CDS AEJO02000022.1 18195 19151 3 + 957 O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-) - none -
fig|6666666.229907.peg.1121 CDS AEJO02000022.1 19114 20532 1 + 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229907.peg.1122 CDS AEJO02000022.1 21074 21877 2 + 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229907.peg.1123 CDS AEJO02000022.1 21877 22671 1 + 795 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229907.peg.1124 CDS AEJO02000022.1 22696 23724 1 + 1029 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229907.peg.1125 CDS AEJO02000022.1 24626 23886 -2 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229907.peg.1126 CDS AEJO02000022.1 25554 24901 -3 - 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229907.peg.1127 CDS AEJO02000022.1 25637 26371 2 + 735 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229907.peg.1128 CDS AEJO02000022.1 26422 27336 1 + 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229907.peg.1129 CDS AEJO02000022.1 27977 27393 -2 - 585 Putative lipoprotein yceB precursor - none -
fig|6666666.229907.peg.1130 CDS AEJO02000022.1 28179 28700 3 + 522 unknown - none -
fig|6666666.229907.peg.1131 CDS AEJO02000022.1 28721 29506 2 + 786 serine/threonine protein kinase - none -
fig|6666666.229907.peg.1132 CDS AEJO02000022.1 29503 29631 1 + 129 hypothetical protein - none -
fig|6666666.229907.peg.1133 CDS AEJO02000022.1 30646 29780 -1 - 867 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.229907.peg.1134 CDS AEJO02000022.1 32630 30897 -2 - 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229907.peg.1135 CDS AEJO02000022.1 34465 32630 -1 - 1836 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229907.peg.1136 CDS AEJO02000022.1 35452 34499 -1 - 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229907.peg.1137 CDS AEJO02000022.1 36369 35512 -3 - 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229907.peg.1138 CDS AEJO02000022.1 37820 37089 -2 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229907.peg.1139 CDS AEJO02000022.1 39050 37836 -2 - 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229907.peg.1140 CDS AEJO02000022.1 39179 39835 2 + 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229907.peg.1141 CDS AEJO02000022.1 41376 39934 -3 - 1443 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229907.peg.1142 CDS AEJO02000022.1 41536 42012 1 + 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229907.peg.1143 CDS AEJO02000022.1 42390 42088 -3 - 303 FIG004454: RNA binding protein - none -
fig|6666666.229907.peg.1144 CDS AEJO02000022.1 42558 42857 3 + 300 Phage-related protein - none -
fig|6666666.229907.peg.1145 CDS AEJO02000022.1 42854 43150 2 + 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229907.peg.1146 CDS AEJO02000022.1 43797 43183 -3 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229907.peg.1147 CDS AEJO02000022.1 43824 45221 3 + 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229907.peg.1148 CDS AEJO02000022.1 46004 45525 -2 - 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229907.peg.1149 CDS AEJO02000022.1 46065 47045 3 + 981 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229907.peg.1150 CDS AEJO02000022.1 49375 47642 -1 - 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229907.peg.1151 CDS AEJO02000022.1 49472 49951 2 + 480 Protein yecM - none -
fig|6666666.229907.peg.1152 CDS AEJO02000022.1 50102 50557 2 + 456 Outer membrane lipoprotein - none -
fig|6666666.229907.peg.1153 CDS AEJO02000023.1 97 597 1 + 501 Protein sprT - none -
fig|6666666.229907.peg.1154 CDS AEJO02000023.1 754 1995 1 + 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229907.peg.1155 CDS AEJO02000023.1 2088 3452 3 + 1365 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229907.peg.1156 CDS AEJO02000023.1 4683 3634 -3 - 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229907.peg.1157 CDS AEJO02000023.1 4978 6117 1 + 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229907.peg.1158 CDS AEJO02000023.1 6139 6324 1 + 186 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229907.peg.1159 CDS AEJO02000023.1 6311 6691 2 + 381 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229907.peg.1160 CDS AEJO02000023.1 6701 6814 2 + 114 hypothetical protein - none -
fig|6666666.229907.peg.1161 CDS AEJO02000023.1 6835 7890 1 + 1056 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229907.peg.1162 CDS AEJO02000024.1 789 277 -3 - 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis;
Transport system clustering with HemG
fig|6666666.229907.peg.1163 CDS AEJO02000024.1 2252 789 -2 - 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229907.peg.1164 CDS AEJO02000024.1 2486 2271 -2 - 216 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229907.peg.1165 CDS AEJO02000024.1 2636 2517 -2 - 120 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229907.peg.1166 CDS AEJO02000024.1 2785 2630 -1 - 156 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229907.peg.1167 CDS AEJO02000024.1 2910 2782 -3 - 129 hypothetical protein - none -
fig|6666666.229907.peg.1168 CDS AEJO02000024.1 2987 3112 2 + 126 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229907.peg.1169 CDS AEJO02000024.1 3141 3389 3 + 249 FIG01200701: hypothetical protein - none -
fig|6666666.229907.peg.1170 CDS AEJO02000024.1 3440 4711 2 + 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229907.peg.1171 CDS AEJO02000024.1 4727 5410 2 + 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229907.peg.1172 CDS AEJO02000024.1 5417 5530 2 + 114 hypothetical protein - none -
fig|6666666.229907.peg.1173 CDS AEJO02000024.1 5540 6769 2 + 1230 Tyrosine-specific transport protein - none -
fig|6666666.229907.peg.1174 CDS AEJO02000024.1 7454 7065 -2 - 390 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.229907.peg.1175 CDS AEJO02000024.1 8485 7496 -1 - 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229907.peg.1176 CDS AEJO02000024.1 9134 8514 -2 - 621 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229907.peg.1177 CDS AEJO02000024.1 9553 9164 -1 - 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229907.peg.1178 CDS AEJO02000024.1 9925 9569 -1 - 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229907.peg.1179 CDS AEJO02000024.1 11528 10203 -2 - 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229907.peg.1180 CDS AEJO02000024.1 11966 11532 -2 - 435 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.229907.peg.1181 CDS AEJO02000024.1 12656 12156 -2 - 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229907.peg.1182 CDS AEJO02000024.1 13025 12672 -2 - 354 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.229907.peg.1183 CDS AEJO02000024.1 13572 13039 -3 - 534 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.229907.peg.1184 CDS AEJO02000024.1 13980 13588 -3 - 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229907.peg.1185 CDS AEJO02000024.1 14322 14017 -3 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229907.peg.1186 CDS AEJO02000024.1 14763 14335 -3 - 429 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.229907.peg.1187 CDS AEJO02000024.1 15203 14892 -2 - 312 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.229907.peg.1188 CDS AEJO02000024.1 15585 15214 -3 - 372 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.229907.peg.1189 CDS AEJO02000024.1 17222 16200 -2 - 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229907.peg.1190 CDS AEJO02000024.1 18007 17243 -1 - 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229907.peg.1191 CDS AEJO02000024.1 18707 18045 -2 - 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229907.peg.1192 CDS AEJO02000024.1 18935 18711 -2 - 225 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229907.peg.1193 CDS AEJO02000024.1 19213 19082 -1 - 132 hypothetical protein - none -
fig|6666666.229907.peg.1194 CDS AEJO02000024.1 20595 19483 -3 - 1113 hypothetical protein - none -
fig|6666666.229907.peg.1195 CDS AEJO02000024.1 21543 20650 -3 - 894 hypothetical protein - none -
fig|6666666.229907.peg.1196 CDS AEJO02000025.1 387 662 3 + 276 Mobile element protein - none -
fig|6666666.229907.peg.1197 CDS AEJO02000025.1 745 885 1 + 141 Mobile element protein - none -
fig|6666666.229907.peg.1198 CDS AEJO02000025.1 922 1170 1 + 249 Mobile element protein - none -
fig|6666666.229907.peg.1199 CDS AEJO02000026.1 1794 328 -3 - 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229907.peg.1200 CDS AEJO02000026.1 3173 2043 -2 - 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229907.peg.1201 CDS AEJO02000026.1 5161 3311 -1 - 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229907.peg.1202 CDS AEJO02000026.1 6211 5225 -1 - 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229907.peg.1203 CDS AEJO02000026.1 6453 7154 3 + 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229907.peg.1204 CDS AEJO02000026.1 7168 8055 1 + 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229907.peg.1205 CDS AEJO02000026.1 8065 8934 1 + 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229907.peg.1206 CDS AEJO02000026.1 8944 9822 1 + 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229907.peg.1207 CDS AEJO02000026.1 9977 10780 2 + 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229907.peg.1208 CDS AEJO02000026.1 10836 11981 3 + 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229907.peg.1209 CDS AEJO02000026.1 12081 12194 3 + 114 hypothetical protein - none -
fig|6666666.229907.peg.1210 CDS AEJO02000026.1 12686 12186 -2 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) CBSS-257314.1.peg.752;
Thioredoxin-disulfide reductase
fig|6666666.229907.peg.1211 CDS AEJO02000026.1 13791 12727 -3 - 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229907.peg.1212 CDS AEJO02000026.1 14206 13784 -1 - 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229907.peg.1213 CDS AEJO02000026.1 17269 14216 -1 - 3054 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229907.peg.1214 CDS AEJO02000026.1 17754 18791 3 + 1038 Outer membrane protein A precursor Osmoregulation
fig|6666666.229907.peg.1215 CDS AEJO02000026.1 19109 19438 2 + 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229907.peg.1216 CDS AEJO02000026.1 19413 19526 3 + 114 hypothetical protein - none -
fig|6666666.229907.peg.1217 CDS AEJO02000026.1 19562 20014 2 + 453 putative membrane protein - none -
fig|6666666.229907.peg.1218 CDS AEJO02000026.1 20015 20404 2 + 390 COG2363 - none -
fig|6666666.229907.peg.1219 CDS AEJO02000026.1 20401 24450 1 + 4050 HrpA-like helicases - none -
fig|6666666.229907.peg.1220 CDS AEJO02000026.1 25271 24537 -2 - 735 ATPase domain protein - none -
fig|6666666.229907.peg.1221 CDS AEJO02000026.1 25570 25346 -1 - 225 ATPase domain protein - none -
fig|6666666.229907.peg.1222 CDS AEJO02000026.1 25722 25922 3 + 201 hypothetical protein - none -
fig|6666666.229907.peg.1223 CDS AEJO02000026.1 26565 25900 -3 - 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229907.peg.1224 CDS AEJO02000026.1 27077 26766 -2 - 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229907.peg.1225 CDS AEJO02000026.1 27575 27084 -2 - 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229907.peg.1226 CDS AEJO02000026.1 28236 27565 -3 - 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229907.peg.1227 CDS AEJO02000026.1 29377 28238 -1 - 1140 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229907.peg.1228 CDS AEJO02000026.1 30689 29364 -2 - 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229907.peg.1229 CDS AEJO02000026.1 32122 30692 -1 - 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229907.peg.1230 CDS AEJO02000026.1 32781 32260 -3 - 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229907.peg.1231 CDS AEJO02000026.1 34731 32824 -3 - 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229907.peg.1232 CDS AEJO02000026.1 37423 35030 -1 - 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229907.peg.1233 CDS AEJO02000026.1 37684 37469 -1 - 216 hypothetical protein - none -
fig|6666666.229907.peg.1234 CDS AEJO02000026.1 38027 37686 -2 - 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229907.peg.1235 CDS AEJO02000026.1 38161 38961 1 + 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229907.peg.1236 CDS AEJO02000026.1 39033 41624 3 + 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229907.peg.1237 CDS AEJO02000026.1 42983 41700 -2 - 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229907.peg.1238 CDS AEJO02000026.1 43111 44184 1 + 1074 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.229907.peg.1239 CDS AEJO02000027.1 405 217 -3 - 189 VgrG-3 protein - none -
fig|6666666.229907.peg.1240 CDS AEJO02000027.1 788 1627 2 + 840 Predicted transcriptional regulator of the myo-inositol catabolic operon Inositol catabolism
fig|6666666.229907.peg.1241 CDS AEJO02000027.1 1867 1664 -1 - 204 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain Inositol catabolism;
Inositol catabolism
fig|6666666.229907.peg.1242 CDS AEJO02000027.1 3574 1907 -1 - 1668 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain Inositol catabolism;
Inositol catabolism
fig|6666666.229907.peg.1243 CDS AEJO02000027.1 3885 5831 3 + 1947 Epi-inositol hydrolase (EC 3.7.1.-) Inositol catabolism
fig|6666666.229907.peg.1244 CDS AEJO02000027.1 5885 6781 2 + 897 Inosose dehydratase (EC 4.2.1.44) Inositol catabolism
fig|6666666.229907.peg.1245 CDS AEJO02000027.1 6784 7794 1 + 1011 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229907.peg.1246 CDS AEJO02000027.1 8410 7898 -1 - 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229907.peg.1247 CDS AEJO02000027.1 9636 8488 -3 - 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229907.peg.1248 CDS AEJO02000027.1 11594 9714 -2 - 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229907.peg.1249 CDS AEJO02000027.1 13438 12005 -1 - 1434 Microcin H47 secretion protein - none -
fig|6666666.229907.peg.1250 CDS AEJO02000027.1 15576 13453 -3 - 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229907.peg.1251 CDS AEJO02000027.1 18812 15645 -2 - 3168 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229907.peg.1252 CDS AEJO02000027.1 19331 18825 -2 - 507 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229907.peg.1253 CDS AEJO02000027.1 21700 20438 -1 - 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis;
YrdC-YciO-Sua5 protein family
fig|6666666.229907.peg.1254 CDS AEJO02000027.1 22377 21835 -3 - 543 hypothetical protein - none -
fig|6666666.229907.peg.1255 CDS AEJO02000027.1 22755 22615 -3 - 141 hypothetical protein - none -
fig|6666666.229907.peg.1256 CDS AEJO02000027.1 22907 22758 -2 - 150 hypothetical protein - none -
fig|6666666.229907.peg.1257 CDS AEJO02000027.1 23998 22994 -1 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229907.peg.1258 CDS AEJO02000027.1 24054 24503 3 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229907.peg.1259 CDS AEJO02000027.1 24513 24956 3 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229907.peg.1260 CDS AEJO02000027.1 28347 24958 -3 - 3390 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229907.peg.1261 CDS AEJO02000027.1 28695 28393 -3 - 303 FIG00696353: hypothetical protein - none -
fig|6666666.229907.peg.1262 CDS AEJO02000027.1 29365 28670 -1 - 696 FIG00696574: hypothetical protein - none -
fig|6666666.229907.peg.1263 CDS AEJO02000027.1 30078 29362 -3 - 717 Type II secretory pathway, component PulJ - none -
fig|6666666.229907.peg.1264 CDS AEJO02000027.1 30709 30092 -1 - 618 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229907.peg.1265 CDS AEJO02000027.1 31784 31317 -2 - 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229907.peg.1266 CDS AEJO02000027.1 33079 31799 -1 - 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229907.peg.1267 CDS AEJO02000027.1 34280 33114 -2 - 1167 TolA protein Ton and Tol transport systems
fig|6666666.229907.peg.1268 CDS AEJO02000027.1 34719 34297 -3 - 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229907.peg.1269 CDS AEJO02000027.1 35494 34805 -1 - 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229907.peg.1270 CDS AEJO02000027.1 35928 35524 -3 - 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229907.peg.1271 CDS AEJO02000027.1 37582 36446 -1 - 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229907.peg.1272 CDS AEJO02000027.1 39066 37597 -3 - 1470 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229907.peg.1273 CDS AEJO02000027.1 39614 39931 2 + 318 Chromosome segregation ATPases - none -
fig|6666666.229907.peg.1274 CDS AEJO02000027.1 40998 39985 -3 - 1014 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229907.peg.1275 CDS AEJO02000027.1 41627 41013 -2 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229907.peg.1276 CDS AEJO02000027.1 42263 41691 -2 - 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229907.peg.1277 CDS AEJO02000027.1 42729 42319 -3 - 411 excinuclease ABC subunit A - none -
fig|6666666.229907.peg.1278 CDS AEJO02000027.1 43481 42741 -2 - 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229907.peg.1279 CDS AEJO02000027.1 43886 43515 -2 - 372 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) Folate Biosynthesis
fig|6666666.229907.peg.1280 CDS AEJO02000027.1 45335 44067 -2 - 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229907.peg.1281 CDS AEJO02000028.1 293 922 2 + 630 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - none -
fig|6666666.229907.peg.1282 CDS AEJO02000028.1 2465 2199 -2 - 267 hypothetical protein - none -
fig|6666666.229907.peg.1283 CDS AEJO02000028.1 2944 2618 -1 - 327 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229907.peg.1284 CDS AEJO02000028.1 3184 3585 1 + 402 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229907.peg.1285 CDS AEJO02000028.1 3826 3686 -1 - 141 hypothetical protein - none -
fig|6666666.229907.peg.1286 CDS AEJO02000028.1 4163 3885 -2 - 279 hypothetical protein - none -
fig|6666666.229907.peg.1287 CDS AEJO02000028.1 5849 4185 -2 - 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229907.peg.1288 CDS AEJO02000028.1 6795 5854 -3 - 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229907.peg.1289 CDS AEJO02000028.1 8327 6798 -2 - 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229907.peg.1290 CDS AEJO02000028.1 8969 8439 -2 - 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229907.peg.1291 CDS AEJO02000028.1 9652 9068 -1 - 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229907.peg.1292 CDS AEJO02000028.1 9736 10002 1 + 267 Protein yihD - none -
fig|6666666.229907.peg.1293 CDS AEJO02000028.1 10021 10638 1 + 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229907.peg.1294 CDS AEJO02000028.1 10698 11027 3 + 330 Protein yifE - none -
fig|6666666.229907.peg.1295 CDS AEJO02000028.1 11098 12195 1 + 1098 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) - none -
fig|6666666.229907.peg.1296 CDS AEJO02000028.1 12197 12955 2 + 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229907.peg.1297 CDS AEJO02000028.1 13047 14759 3 + 1713 hypothetical protein - none -
fig|6666666.229907.peg.1298 CDS AEJO02000029.1 663 13 -3 - 651 Mobile element protein - none -
fig|6666666.229907.peg.1299 CDS AEJO02000029.1 1190 816 -2 - 375 hypothetical protein - none -
fig|6666666.229907.peg.1300 CDS AEJO02000030.1 621 1181 3 + 561 Protein of unknown function DUF414 - none -
fig|6666666.229907.peg.1301 CDS AEJO02000030.1 1194 1628 3 + 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229907.peg.1302 CDS AEJO02000030.1 1648 3015 1 + 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229907.peg.1303 CDS AEJO02000030.1 3534 3091 -3 - 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229907.peg.1304 CDS AEJO02000030.1 3707 4474 2 + 768 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229907.peg.1305 CDS AEJO02000030.1 4586 5443 2 + 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229907.peg.1306 CDS AEJO02000030.1 5483 5902 2 + 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229907.peg.1307 CDS AEJO02000030.1 5884 6213 1 + 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229907.peg.1308 CDS AEJO02000030.1 6194 7195 2 + 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229907.peg.1309 CDS AEJO02000030.1 7294 7770 1 + 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229907.peg.1310 CDS AEJO02000030.1 7877 7725 -2 - 153 hypothetical protein - none -
fig|6666666.229907.peg.1311 CDS AEJO02000030.1 7894 8361 1 + 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229907.peg.1312 CDS AEJO02000030.1 8405 9751 2 + 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229907.peg.1313 CDS AEJO02000030.1 10054 10815 1 + 762 Periplasmic protein TonB, links inner and outer membranes - none -
fig|6666666.229907.peg.1314 CDS AEJO02000030.1 10934 12322 2 + 1389 FOG: TPR repeat - none -
fig|6666666.229907.peg.1315 CDS AEJO02000030.1 12346 12618 1 + 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229907.peg.1316 CDS AEJO02000030.1 12615 14051 3 + 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229907.peg.1317 CDS AEJO02000030.1 14061 14609 3 + 549 Protein involved in cell division - none -
fig|6666666.229907.peg.1318 CDS AEJO02000030.1 14622 15506 3 + 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229907.peg.1319 CDS AEJO02000030.1 15751 16800 1 + 1050 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229907.peg.1320 CDS AEJO02000030.1 16794 17093 3 + 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229907.peg.1321 CDS AEJO02000030.1 17956 17708 -1 - 249 unknown - none -
fig|6666666.229907.peg.1322 CDS AEJO02000030.1 18734 18411 -2 - 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229907.peg.1323 CDS AEJO02000030.1 20336 18963 -2 - 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229907.peg.1324 CDS AEJO02000030.1 20519 20391 -2 - 129 hypothetical protein - none -
fig|6666666.229907.peg.1325 CDS AEJO02000030.1 21023 20733 -2 - 291 FIG00904058: hypothetical protein - none -
fig|6666666.229907.peg.1326 CDS AEJO02000030.1 21216 21013 -3 - 204 FIG003276: zinc-binding protein - none -
fig|6666666.229907.peg.1327 CDS AEJO02000030.1 21829 21206 -1 - 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229907.peg.1328 CDS AEJO02000030.1 22592 22215 -2 - 378 Mobile element protein - none -
fig|6666666.229907.peg.1329 CDS AEJO02000031.1 36 908 3 + 873 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229907.peg.1330 CDS AEJO02000031.1 908 2263 2 + 1356 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229907.peg.1331 CDS AEJO02000031.1 2287 3663 1 + 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229907.peg.1332 CDS AEJO02000031.1 3773 4168 2 + 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229907.peg.1333 CDS AEJO02000031.1 4263 4697 3 + 435 Ribonuclease E inhibitor RraB RNA processing and degradation, bacterial
fig|6666666.229907.peg.1334 CDS AEJO02000031.1 4748 5467 2 + 720 probable periplasmic protein NMA1059 - none -
fig|6666666.229907.peg.1335 CDS AEJO02000031.1 5562 6158 3 + 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229907.peg.1336 CDS AEJO02000031.1 6979 6575 -1 - 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229907.peg.1337 CDS AEJO02000031.1 7259 7104 -2 - 156 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229907.peg.1338 CDS AEJO02000031.1 8217 7267 -3 - 951 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229907.peg.1339 CDS AEJO02000031.1 8397 8224 -3 - 174 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229907.peg.1340 CDS AEJO02000031.1 8608 8892 1 + 285 hypothetical protein - none -
fig|6666666.229907.peg.1341 CDS AEJO02000031.1 8843 9205 2 + 363 FIG00696564: hypothetical protein - none -
fig|6666666.229907.peg.1342 CDS AEJO02000031.1 9198 9323 3 + 126 hypothetical protein - none -
fig|6666666.229907.peg.1343 CDS AEJO02000031.1 9739 9389 -1 - 351 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229907.peg.1344 CDS AEJO02000031.1 9813 10874 3 + 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229907.peg.1345 CDS AEJO02000031.1 11767 11009 -1 - 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229907.peg.1346 CDS AEJO02000031.1 12254 11802 -2 - 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229907.peg.1347 CDS AEJO02000031.1 12420 13412 3 + 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229907.peg.1348 CDS AEJO02000031.1 14451 13468 -3 - 984 tRNA dihydrouridine synthase A - none -
fig|6666666.229907.peg.1349 CDS AEJO02000031.1 15845 14454 -2 - 1392 Chloride channel protein - none -
fig|6666666.229907.peg.1350 CDS AEJO02000032.1 1051 368 -1 - 684 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229907.peg.1351 CDS AEJO02000032.1 1357 3015 1 + 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229907.peg.1352 CDS AEJO02000032.1 3265 4482 1 + 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229907.peg.1353 CDS AEJO02000032.1 4479 5306 3 + 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229907.peg.1354 CDS AEJO02000032.1 6022 5318 -1 - 705 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein CBSS-203122.12.peg.188;
CBSS-203122.12.peg.188
fig|6666666.229907.peg.1355 CDS AEJO02000032.1 6284 6817 2 + 534 FIGfam050825 CBSS-203122.12.peg.188
fig|6666666.229907.peg.1356 CDS AEJO02000032.1 6810 8723 3 + 1914 TniA putative transposase CBSS-203122.12.peg.188
fig|6666666.229907.peg.1357 CDS AEJO02000032.1 8723 9616 2 + 894 TniB NTP-binding protein CBSS-203122.12.peg.188
fig|6666666.229907.peg.1358 CDS AEJO02000032.1 9574 10692 1 + 1119 Mll9366 protein CBSS-203122.12.peg.188
fig|6666666.229907.peg.1359 CDS AEJO02000032.1 10653 12107 3 + 1455 FIGfam110555 CBSS-203122.12.peg.188
fig|6666666.229907.peg.1360 CDS AEJO02000032.1 13427 12480 -2 - 948 Type II restriction enzyme BsuBI (EC 3.1.21.4) - none -
fig|6666666.229907.peg.1361 CDS AEJO02000032.1 14826 13399 -3 - 1428 Modification methylase PstI (EC 2.1.1.72) - none -
fig|6666666.229907.peg.1362 CDS AEJO02000032.1 17757 14890 -3 - 2868 DNA helicase IV CBSS-83333.1.peg.946;
DNA repair, bacterial UvrD and related helicases
fig|6666666.229907.peg.1363 CDS AEJO02000032.1 18964 17966 -1 - 999 RelA/SpoT - none -
fig|6666666.229907.peg.1364 CDS AEJO02000032.1 20049 18961 -3 - 1089 hypothetical protein - none -
fig|6666666.229907.peg.1365 CDS AEJO02000032.1 21962 20139 -2 - 1824 hypothetical protein - none -
fig|6666666.229907.peg.1366 CDS AEJO02000032.1 22931 22065 -2 - 867 MG(2+) CHELATASE FAMILY PROTEIN CBSS-203122.12.peg.188
fig|6666666.229907.peg.1367 CDS AEJO02000032.1 23660 23046 -2 - 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229907.peg.1368 CDS AEJO02000032.1 23670 23783 3 + 114 hypothetical protein - none -
fig|6666666.229907.peg.1369 CDS AEJO02000032.1 23793 24668 3 + 876 Membrane protein LAPB - none -
fig|6666666.229907.peg.1370 CDS AEJO02000032.1 25240 24764 -1 - 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) Biotin synthesis cluster;
RNA methylation
fig|6666666.229907.peg.1371 CDS AEJO02000032.1 25856 25359 -2 - 498 Phospholipid-binding protein - none -
fig|6666666.229907.peg.1372 CDS AEJO02000032.1 26804 25962 -2 - 843 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229907.peg.1373 CDS AEJO02000032.1 27516 26839 -3 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229907.peg.1374 CDS AEJO02000032.1 28543 27506 -1 - 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229907.peg.1375 CDS AEJO02000032.1 28739 29296 2 + 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229907.peg.1376 CDS AEJO02000033.1 445 44 -1 - 402 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229907.peg.1377 CDS AEJO02000033.1 809 513 -2 - 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.1378 CDS AEJO02000033.1 962 819 -2 - 144 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.1379 CDS AEJO02000033.1 1107 1226 3 + 120 hypothetical protein - none -
fig|6666666.229907.peg.1380 CDS AEJO02000033.1 2900 1209 -2 - 1692 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229907.peg.1381 CDS AEJO02000033.1 3101 4285 2 + 1185 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229907.peg.1382 CDS AEJO02000033.1 4305 6239 3 + 1935 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) Multidrug Resistance Efflux Pumps
fig|6666666.229907.peg.1383 CDS AEJO02000033.1 6316 7689 1 + 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229907.peg.1384 CDS AEJO02000033.1 9485 7944 -2 - 1542 Esterase/lipase - none -
fig|6666666.229907.peg.1385 CDS AEJO02000033.1 9925 9602 -1 - 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229907.peg.1386 CDS AEJO02000033.1 10871 10008 -2 - 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229907.peg.1387 CDS AEJO02000033.1 11593 10916 -1 - 678 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229907.peg.1388 CDS AEJO02000033.1 11724 12632 3 + 909 Putative surface protein - none -
fig|6666666.229907.peg.1389 CDS AEJO02000033.1 12646 14103 1 + 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.1390 CDS AEJO02000033.1 14165 14806 2 + 642 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229907.peg.1391 CDS AEJO02000033.1 16209 14863 -3 - 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229907.peg.1392 CDS AEJO02000033.1 17128 16232 -1 - 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229907.peg.1393 CDS AEJO02000033.1 17242 17373 1 + 132 hypothetical protein - none -
fig|6666666.229907.peg.1394 CDS AEJO02000033.1 17354 17599 2 + 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229907.peg.1395 CDS AEJO02000033.1 17610 18500 3 + 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229907.peg.1396 CDS AEJO02000033.1 18585 20435 3 + 1851 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229907.peg.1397 CDS AEJO02000034.1 243 494 3 + 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.1398 CDS AEJO02000034.1 491 745 2 + 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.1399 CDS AEJO02000034.1 758 1501 2 + 744 Probable transmembrane protein - none -
fig|6666666.229907.peg.1400 CDS AEJO02000034.1 1474 1635 1 + 162 hypothetical protein - none -
fig|6666666.229907.peg.1401 CDS AEJO02000034.1 1678 2043 1 + 366 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229907.peg.1402 CDS AEJO02000034.1 2053 2505 1 + 453 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229907.peg.1403 CDS AEJO02000034.1 4812 2638 -3 - 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229907.peg.1404 CDS AEJO02000034.1 6335 4986 -2 - 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229907.peg.1405 CDS AEJO02000034.1 6553 7071 1 + 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229907.peg.1406 CDS AEJO02000034.1 7190 7068 -2 - 123 hypothetical protein - none -
fig|6666666.229907.peg.1407 CDS AEJO02000034.1 8139 7141 -3 - 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229907.peg.1408 CDS AEJO02000034.1 9012 8188 -3 - 825 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229907.peg.1409 CDS AEJO02000034.1 9233 12343 2 + 3111 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229907.peg.1410 CDS AEJO02000034.1 12441 13271 3 + 831 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229907.peg.1411 CDS AEJO02000034.1 13264 13977 1 + 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229907.peg.1412 CDS AEJO02000034.1 16829 14544 -2 - 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229907.peg.1413 CDS AEJO02000034.1 17122 17721 1 + 600 Hydrogenase-4 component A - none -
fig|6666666.229907.peg.1414 CDS AEJO02000034.1 17755 19776 1 + 2022 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229907.peg.1415 CDS AEJO02000034.1 19784 20749 2 + 966 Hydrogenase-4 component C (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229907.peg.1416 CDS AEJO02000034.1 20762 22207 2 + 1446 Na(+) H(+) antiporter subunit A - none -
fig|6666666.229907.peg.1417 CDS AEJO02000034.1 22218 22856 3 + 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229907.peg.1418 CDS AEJO02000034.1 22861 24399 1 + 1539 Hydrogenase-4 component F - none -
fig|6666666.229907.peg.1419 CDS AEJO02000034.1 24419 26149 2 + 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229907.peg.1420 CDS AEJO02000034.1 26163 26810 3 + 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229907.peg.1421 CDS AEJO02000034.1 26807 27583 2 + 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229907.peg.1422 CDS AEJO02000034.1 27718 28122 1 + 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229907.peg.1423 CDS AEJO02000034.1 28154 28573 2 + 420 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) Hydrogenases
fig|6666666.229907.peg.1424 CDS AEJO02000034.1 28701 29873 3 + 1173 cell filamentation protein Fic-related protein - none -
fig|6666666.229907.peg.1425 CDS AEJO02000034.1 30006 32228 3 + 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229907.peg.1428 CDS AEJO02000035.1 441 133 -3 - 309 Mobile element protein - none -
fig|6666666.229907.peg.1429 CDS AEJO02000035.1 620 486 -2 - 135 hypothetical protein - none -
fig|6666666.229907.peg.1430 CDS AEJO02000035.1 1572 625 -3 - 948 hypothetical protein - none -
fig|6666666.229907.peg.1431 CDS AEJO02000035.1 3993 2044 -3 - 1950 hypothetical protein - none -
fig|6666666.229907.peg.1432 CDS AEJO02000035.1 5210 4200 -2 - 1011 hypothetical protein - none -
fig|6666666.229907.peg.1433 CDS AEJO02000035.1 5515 5351 -1 - 165 hypothetical protein - none -
fig|6666666.229907.peg.1434 CDS AEJO02000035.1 6188 5682 -2 - 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229907.peg.1435 CDS AEJO02000035.1 6886 6401 -1 - 486 Putative membrane protein - none -
fig|6666666.229907.peg.1436 CDS AEJO02000035.1 7494 6889 -3 - 606 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229907.peg.1437 CDS AEJO02000035.1 8096 7494 -2 - 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229907.peg.1438 CDS AEJO02000035.1 8224 8604 1 + 381 FIG00782409: hypothetical protein - none -
fig|6666666.229907.peg.1439 CDS AEJO02000035.1 11135 9120 -2 - 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229907.peg.1440 CDS AEJO02000035.1 11375 11145 -2 - 231 FIG00696102: hypothetical protein - none -
fig|6666666.229907.peg.1441 CDS AEJO02000035.1 12042 11479 -3 - 564 Outer membrane protein 18/16 - none -
fig|6666666.229907.peg.1442 CDS AEJO02000035.1 12259 15060 1 + 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229907.peg.1443 CDS AEJO02000035.1 15566 16657 2 + 1092 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.5.3) - none -
fig|6666666.229907.peg.1444 CDS AEJO02000035.1 16753 17991 1 + 1239 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229907.peg.1445 CDS AEJO02000035.1 18002 18619 2 + 618 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3) - none -
fig|6666666.229907.peg.1446 CDS AEJO02000035.1 18621 19460 3 + 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.5.3) - none -
fig|6666666.229907.peg.1447 CDS AEJO02000035.1 19494 20108 3 + 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229907.peg.1448 CDS AEJO02000035.1 20122 20331 1 + 210 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229907.peg.1449 CDS AEJO02000035.1 20476 21381 1 + 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229907.peg.1450 CDS AEJO02000035.1 21431 21691 2 + 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229907.peg.1451 CDS AEJO02000035.1 21731 22039 2 + 309 FIG074102: hypothetical protein - none -
fig|6666666.229907.peg.1452 CDS AEJO02000035.1 22161 22499 3 + 339 FIG074102: hypothetical protein - none -
fig|6666666.229907.peg.1453 CDS AEJO02000035.1 22636 22770 1 + 135 hypothetical protein - none -
fig|6666666.229907.peg.1454 CDS AEJO02000035.1 22818 24686 3 + 1869 ATPase family protein - none -
fig|6666666.229907.peg.1455 CDS AEJO02000035.1 24679 26790 1 + 2112 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229907.peg.1456 CDS AEJO02000035.1 28493 26859 -2 - 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229907.peg.1457 CDS AEJO02000035.1 28607 30022 2 + 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229907.peg.1458 CDS AEJO02000035.1 30132 30332 3 + 201 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Riboflavin synthesis cluster
fig|6666666.229907.peg.1459 CDS AEJO02000035.1 31103 30519 -2 - 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229907.peg.1460 CDS AEJO02000035.1 31901 31215 -2 - 687 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.229907.peg.1461 CDS AEJO02000035.1 32047 32859 1 + 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229907.peg.1462 CDS AEJO02000035.1 33043 34155 1 + 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229907.peg.1463 CDS AEJO02000035.1 34810 34229 -1 - 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229907.peg.1464 CDS AEJO02000035.1 35075 37645 2 + 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229907.peg.1465 CDS AEJO02000035.1 37773 37624 -3 - 150 hypothetical protein - none -
fig|6666666.229907.peg.1466 CDS AEJO02000035.1 38246 37746 -2 - 501 hypothetical protein - none -
fig|6666666.229907.peg.1467 CDS AEJO02000035.1 38429 39457 2 + 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229907.peg.1468 CDS AEJO02000035.1 39457 39636 1 + 180 hypothetical protein - none -
fig|6666666.229907.peg.1469 CDS AEJO02000035.1 39715 40539 1 + 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229907.peg.1470 CDS AEJO02000035.1 40549 41439 1 + 891 Tyrosine recombinase XerC - none -
fig|6666666.229907.peg.1471 CDS AEJO02000035.1 41454 42167 3 + 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229907.peg.1472 CDS AEJO02000035.1 42694 42269 -1 - 426 Excinuclease ATPase subunit - none -
fig|6666666.229907.peg.1473 CDS AEJO02000035.1 42842 42982 2 + 141 hypothetical protein - none -
fig|6666666.229907.peg.1474 CDS AEJO02000035.1 43074 43817 3 + 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1475 CDS AEJO02000035.1 43802 44590 2 + 789 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1476 CDS AEJO02000035.1 44568 44831 3 + 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1477 CDS AEJO02000035.1 44834 45085 2 + 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1478 CDS AEJO02000035.1 45085 46752 1 + 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1479 CDS AEJO02000035.1 46778 47323 2 + 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1480 CDS AEJO02000035.1 47320 48681 1 + 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1481 CDS AEJO02000035.1 48681 49403 3 + 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1482 CDS AEJO02000035.1 49400 50326 2 + 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1483 CDS AEJO02000035.1 50323 50769 1 + 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1484 CDS AEJO02000035.1 50766 51350 3 + 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1485 CDS AEJO02000035.1 51357 53630 3 + 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1486 CDS AEJO02000035.1 53760 54239 3 + 480 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1487 CDS AEJO02000035.1 54248 55471 2 + 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1488 CDS AEJO02000035.1 55464 55907 3 + 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1489 CDS AEJO02000035.1 55957 56685 1 + 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1490 CDS AEJO02000035.1 56716 57960 1 + 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229907.peg.1491 CDS AEJO02000036.1 86 661 2 + 576 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229907.peg.1492 CDS AEJO02000036.1 672 1694 3 + 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229907.peg.1493 CDS AEJO02000036.1 1701 2381 3 + 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229907.peg.1494 CDS AEJO02000036.1 2378 3286 2 + 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.229907.peg.1495 CDS AEJO02000036.1 4745 3390 -2 - 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229907.peg.1496 CDS AEJO02000036.1 6484 4874 -1 - 1611 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229907.peg.1497 CDS AEJO02000036.1 6768 6505 -3 - 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229907.peg.1498 CDS AEJO02000036.1 7058 6723 -2 - 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229907.peg.1499 CDS AEJO02000036.1 7238 7104 -2 - 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.229907.peg.1500 CDS AEJO02000036.1 7656 9017 3 + 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229907.peg.1501 CDS AEJO02000036.1 9028 10128 1 + 1101 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229907.peg.1502 CDS AEJO02000036.1 10132 11208 1 + 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229907.peg.1503 CDS AEJO02000036.1 12010 11255 -1 - 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229907.peg.1504 CDS AEJO02000036.1 12198 12773 3 + 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229907.peg.1505 CDS AEJO02000036.1 14127 12931 -3 - 1197 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229907.peg.1506 CDS AEJO02000036.1 15173 14124 -2 - 1050 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229907.peg.1507 CDS AEJO02000036.1 15700 15170 -1 - 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229907.peg.1508 CDS AEJO02000036.1 17603 15693 -2 - 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229907.peg.1509 CDS AEJO02000036.1 17742 17960 3 + 219 hypothetical protein - none -
fig|6666666.229907.peg.1510 CDS AEJO02000036.1 19157 18192 -2 - 966 NrfD protein - none -
fig|6666666.229907.peg.1511 CDS AEJO02000036.1 19831 19154 -1 - 678 NrfC protein - none -
fig|6666666.229907.peg.1512 CDS AEJO02000036.1 20493 19828 -3 - 666 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229907.peg.1513 CDS AEJO02000036.1 22090 20567 -1 - 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229907.peg.1514 CDS AEJO02000036.1 22958 22668 -2 - 291 hypothetical protein - none -
fig|6666666.229907.peg.1515 CDS AEJO02000036.1 23599 22976 -1 - 624 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229907.peg.1516 CDS AEJO02000036.1 24657 23734 -3 - 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229907.peg.1517 CDS AEJO02000036.1 25109 24657 -2 - 453 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229907.peg.1518 CDS AEJO02000036.1 25753 25208 -1 - 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229907.peg.1519 CDS AEJO02000036.1 27740 25782 -2 - 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229907.peg.1520 CDS AEJO02000036.1 28258 27740 -1 - 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229907.peg.1521 CDS AEJO02000036.1 28428 28255 -3 - 174 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229907.peg.1522 CDS AEJO02000036.1 29216 28479 -2 - 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229907.peg.1523 CDS AEJO02000036.1 29892 29227 -3 - 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229907.peg.1524 CDS AEJO02000036.1 30532 29897 -1 - 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229907.peg.1525 CDS AEJO02000036.1 31177 30704 -1 - 474 Bicyclomycin resistance protein - none -
fig|6666666.229907.peg.1526 CDS AEJO02000036.1 31895 31152 -2 - 744 Bicyclomycin resistance protein - none -
fig|6666666.229907.peg.1527 CDS AEJO02000036.1 32601 31900 -3 - 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229907.peg.1528 CDS AEJO02000037.1 354 1742 3 + 1389 hypothetical protein - none -
fig|6666666.229907.peg.1529 CDS AEJO02000037.1 1732 2829 1 + 1098 hypothetical protein - none -
fig|6666666.229907.peg.1530 CDS AEJO02000037.1 2845 4824 1 + 1980 hypothetical protein - none -
fig|6666666.229907.peg.1531 CDS AEJO02000037.1 5336 5815 2 + 480 hypothetical protein - none -
fig|6666666.229907.peg.1532 CDS AEJO02000037.1 6277 6432 1 + 156 hypothetical protein - none -
fig|6666666.229907.peg.1533 CDS AEJO02000037.1 6425 8689 2 + 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229907.peg.1534 CDS AEJO02000037.1 8833 9477 1 + 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229907.peg.1535 CDS AEJO02000037.1 9888 10679 3 + 792 putative lipoprotein - none -
fig|6666666.229907.peg.1536 CDS AEJO02000037.1 11708 10881 -2 - 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229907.peg.1537 CDS AEJO02000037.1 11803 12246 1 + 444 FIG00904084: hypothetical protein - none -
fig|6666666.229907.peg.1538 CDS AEJO02000037.1 12932 12336 -2 - 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.1539 CDS AEJO02000037.1 13029 13382 3 + 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229907.peg.1540 CDS AEJO02000037.1 13403 14833 2 + 1431 Transglycosylase, Slt family - none -
fig|6666666.229907.peg.1541 CDS AEJO02000037.1 14844 14990 3 + 147 hypothetical protein - none -
fig|6666666.229907.peg.1542 CDS AEJO02000037.1 15572 15033 -2 - 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229907.peg.1543 CDS AEJO02000037.1 17140 15596 -1 - 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229907.peg.1544 CDS AEJO02000037.1 17335 18066 1 + 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229907.peg.1545 CDS AEJO02000037.1 19401 18187 -3 - 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229907.peg.1546 CDS AEJO02000037.1 19518 20822 3 + 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229907.peg.1547 CDS AEJO02000037.1 20813 22519 2 + 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229907.peg.1548 CDS AEJO02000037.1 22572 23321 3 + 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229907.peg.1549 CDS AEJO02000037.1 23417 23686 2 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229907.peg.1550 CDS AEJO02000037.1 23894 25048 2 + 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229907.peg.1551 CDS AEJO02000038.1 310 459 1 + 150 hypothetical protein - none -
fig|6666666.229907.peg.1552 CDS AEJO02000038.1 836 994 2 + 159 hypothetical protein - none -
fig|6666666.229907.peg.1553 CDS AEJO02000038.1 1950 1150 -3 - 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229907.peg.1554 CDS AEJO02000038.1 2101 2841 1 + 741 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Bacteria
fig|6666666.229907.peg.1555 CDS AEJO02000038.1 2903 3376 2 + 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229907.peg.1556 CDS AEJO02000038.1 3430 4644 1 + 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229907.peg.1557 CDS AEJO02000038.1 4704 5087 3 + 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229907.peg.1558 CDS AEJO02000038.1 5219 5542 2 + 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229907.peg.1559 CDS AEJO02000038.1 5554 6075 1 + 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229907.peg.1560 CDS AEJO02000038.1 6096 7955 3 + 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229907.peg.1561 CDS AEJO02000038.1 7967 8308 2 + 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229907.peg.1562 CDS AEJO02000038.1 8308 8502 1 + 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229907.peg.1563 CDS AEJO02000038.1 10696 8636 -1 - 2061 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229907.peg.1564 CDS AEJO02000038.1 10869 11981 3 + 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229907.peg.1565 CDS AEJO02000040.1 2156 210 -2 - 1947 ABC transporter ATP-binding protein - none -
fig|6666666.229907.peg.1566 CDS AEJO02000040.1 2150 2269 2 + 120 hypothetical protein - none -
fig|6666666.229907.peg.1567 CDS AEJO02000040.1 2309 2611 2 + 303 FIG022160: hypothetical toxin - none -
fig|6666666.229907.peg.1568 CDS AEJO02000040.1 2613 2906 3 + 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229907.peg.1569 CDS AEJO02000040.1 4295 2943 -2 - 1353 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.229907.peg.1570 CDS AEJO02000040.1 4989 4297 -3 - 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229907.peg.1571 CDS AEJO02000040.1 5348 4989 -2 - 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229907.peg.1572 CDS AEJO02000040.1 5885 6976 2 + 1092 Integrase - none -
fig|6666666.229907.peg.1573 CDS AEJO02000040.1 7325 7086 -2 - 240 FIG050068: DNA-binding protein - none -
fig|6666666.229907.peg.1574 CDS AEJO02000041.1 694 296 -1 - 399 Integrase - none -
fig|6666666.229907.peg.1575 CDS AEJO02000041.1 1140 2876 3 + 1737 hypothetical protein - none -
fig|6666666.229907.peg.1576 CDS AEJO02000041.1 3157 2927 -1 - 231 Regulatory protein C.BcnI - none -
fig|6666666.229907.peg.1577 CDS AEJO02000041.1 4940 3984 -2 - 957 hypothetical protein - none -
fig|6666666.229907.peg.1578 CDS AEJO02000041.1 5956 5141 -1 - 816 hypothetical protein - none -
fig|6666666.229907.peg.1579 CDS AEJO02000041.1 6199 8079 1 + 1881 Phage tail fiber protein Phage tail fiber proteins
fig|6666666.229907.peg.1580 CDS AEJO02000041.1 9500 8604 -2 - 897 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.229907.peg.1581 CDS AEJO02000041.1 9596 9754 2 + 159 hypothetical protein - none -
fig|6666666.229907.peg.1582 CDS AEJO02000041.1 10488 10751 3 + 264 hypothetical protein - none -
fig|6666666.229907.peg.1583 CDS AEJO02000041.1 10800 10967 3 + 168 hypothetical protein - none -
fig|6666666.229907.peg.1584 CDS AEJO02000041.1 10964 11932 2 + 969 STEC autoagglutinating adhesin - none -
fig|6666666.229907.peg.1585 CDS AEJO02000041.1 12980 14236 2 + 1257 hypothetical protein - none -
fig|6666666.229907.peg.1586 CDS AEJO02000041.1 14538 14392 -3 - 147 hypothetical protein - none -
fig|6666666.229907.peg.1587 CDS AEJO02000041.1 15784 14531 -1 - 1254 Integrase - none -
fig|6666666.229907.peg.1588 CDS AEJO02000041.1 16858 16631 -1 - 228 FIG00354920: hypothetical protein - none -
fig|6666666.229907.peg.1589 CDS AEJO02000041.1 19506 16855 -3 - 2652 Putative uncharacterized protein ydbH - none -
fig|6666666.229907.peg.1590 CDS AEJO02000041.1 20310 19693 -3 - 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229907.peg.1591 CDS AEJO02000041.1 20391 22316 3 + 1926 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229907.peg.1592 CDS AEJO02000041.1 22464 23522 3 + 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229907.peg.1593 CDS AEJO02000041.1 23604 24062 3 + 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229907.peg.1594 CDS AEJO02000041.1 24135 24524 3 + 390 Endoribonuclease L-PSP - none -
fig|6666666.229907.peg.1595 CDS AEJO02000041.1 26704 24593 -1 - 2112 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229907.peg.1596 CDS AEJO02000041.1 27676 26723 -1 - 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229907.peg.1597 CDS AEJO02000042.1 2031 253 -3 - 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229907.peg.1598 CDS AEJO02000042.1 2239 2766 1 + 528 membrane protein, putative - none -
fig|6666666.229907.peg.1599 CDS AEJO02000042.1 2838 3563 3 + 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229907.peg.1600 CDS AEJO02000042.1 6210 3643 -3 - 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229907.peg.1601 CDS AEJO02000042.1 7684 6353 -1 - 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229907.peg.1602 CDS AEJO02000042.1 8085 10037 3 + 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229907.peg.1603 CDS AEJO02000042.1 10076 10603 2 + 528 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229907.peg.1604 CDS AEJO02000042.1 10690 11343 1 + 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229907.peg.1605 CDS AEJO02000042.1 11695 13047 1 + 1353 Histidine permease YuiF - none -
fig|6666666.229907.peg.1606 CDS AEJO02000042.1 13111 13677 1 + 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229907.peg.1607 CDS AEJO02000042.1 15159 13735 -3 - 1425 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229907.peg.1608 CDS AEJO02000042.1 15267 15386 3 + 120 hypothetical protein - none -
fig|6666666.229907.peg.1609 CDS AEJO02000042.1 15496 15645 1 + 150 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) CBSS-87626.3.peg.3639;
Ubiquinone Biosynthesis
fig|6666666.229907.peg.1610 CDS AEJO02000042.1 16392 15661 -3 - 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229907.peg.1611 CDS AEJO02000042.1 17383 16394 -1 - 990 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229907.peg.1612 CDS AEJO02000042.1 17631 17942 3 + 312 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229907.peg.1613 CDS AEJO02000042.1 17963 18220 2 + 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229907.peg.1614 CDS AEJO02000042.1 18291 19223 3 + 933 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229907.peg.1615 CDS AEJO02000042.1 19301 20218 2 + 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229907.peg.1616 CDS AEJO02000042.1 20255 21430 2 + 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229907.peg.1617 CDS AEJO02000042.1 21546 21427 -3 - 120 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229907.peg.1618 CDS AEJO02000042.1 21980 21498 -2 - 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229907.peg.1619 CDS AEJO02000042.1 22343 23968 2 + 1626 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229907.peg.1620 CDS AEJO02000042.1 24069 24989 3 + 921 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229907.peg.1621 CDS AEJO02000042.1 24999 25937 3 + 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229907.peg.1622 CDS AEJO02000042.1 25947 26930 3 + 984 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229907.peg.1623 CDS AEJO02000042.1 26927 27925 2 + 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229907.peg.1624 CDS AEJO02000042.1 28740 28033 -3 - 708 Aerobic respiration control protein arcA - none -
fig|6666666.229907.peg.1625 CDS AEJO02000042.1 29367 29101 -3 - 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229907.peg.1626 CDS AEJO02000042.1 30147 29578 -3 - 570 Lysine decarboxylase family - none -
fig|6666666.229907.peg.1627 CDS AEJO02000042.1 30311 32080 2 + 1770 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229907.peg.1628 CDS AEJO02000042.1 32160 32549 3 + 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229907.peg.1629 CDS AEJO02000042.1 35879 32988 -2 - 2892 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229907.peg.1630 CDS AEJO02000042.1 36010 35876 -1 - 135 hypothetical protein - none -
fig|6666666.229907.peg.1631 CDS AEJO02000042.1 36114 36236 3 + 123 hypothetical protein - none -
fig|6666666.229907.peg.1632 CDS AEJO02000042.1 36346 37305 1 + 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229907.peg.1633 CDS AEJO02000042.1 37719 37504 -3 - 216 Thioredoxin - none -
fig|6666666.229907.peg.1634 CDS AEJO02000042.1 38922 37927 -3 - 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229907.peg.1635 CDS AEJO02000042.1 40076 38946 -2 - 1131 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229907.peg.1636 CDS AEJO02000042.1 40763 40557 -2 - 207 Tfp pilus assembly protein, pilus retraction ATPase PilT - none -
fig|6666666.229907.peg.1637 CDS AEJO02000042.1 41100 40975 -3 - 126 hypothetical protein - none -
fig|6666666.229907.peg.1638 CDS AEJO02000042.1 41090 41281 2 + 192 Mobile element protein - none -
fig|6666666.229907.peg.1639 CDS AEJO02000043.1 39 1178 3 + 1140 Probable phospholipase protein - none -
fig|6666666.229907.peg.1640 CDS AEJO02000044.1 95 589 2 + 495 Integral membrane protein - none -
fig|6666666.229907.peg.1641 CDS AEJO02000044.1 601 2028 1 + 1428 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229907.peg.1642 CDS AEJO02000044.1 2928 3413 3 + 486 Ferritin-like protein 2 - none -
fig|6666666.229907.peg.1643 CDS AEJO02000044.1 3429 3926 3 + 498 Ferritin-like protein 2 - none -
fig|6666666.229907.peg.1644 CDS AEJO02000044.1 4158 3988 -3 - 171 hypothetical protein - none -
fig|6666666.229907.peg.1645 CDS AEJO02000044.1 4375 5040 1 + 666 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229907.peg.1646 CDS AEJO02000044.1 5158 6090 1 + 933 Universal stress protein E Universal stress protein family
fig|6666666.229907.peg.1647 CDS AEJO02000044.1 6217 7053 1 + 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229907.peg.1648 CDS AEJO02000044.1 9744 7138 -3 - 2607 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229907.peg.1649 CDS AEJO02000044.1 10818 9982 -3 - 837 COG0613, Predicted metal-dependent phosphoesterases (PHP family) YrdC-YciO-Sua5 protein family;
tRNA modification Bacteria
fig|6666666.229907.peg.1650 CDS AEJO02000044.1 11851 10832 -1 - 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229907.peg.1651 CDS AEJO02000044.1 14532 11923 -3 - 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229907.peg.1652 CDS AEJO02000044.1 14954 16144 2 + 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229907.peg.1653 CDS AEJO02000044.1 16758 16195 -3 - 564 Transcriptional regulator, TetR family - none -
fig|6666666.229907.peg.1654 CDS AEJO02000044.1 16906 17886 1 + 981 HlyD family secretion protein - none -
fig|6666666.229907.peg.1655 CDS AEJO02000044.1 20320 20556 1 + 237 ABC-type multidrug transport system, permease component - none -
fig|6666666.229907.peg.1656 CDS AEJO02000044.1 20558 21685 2 + 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229907.peg.1657 CDS AEJO02000044.1 21705 23123 3 + 1419 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229907.peg.1658 CDS AEJO02000044.1 23133 23249 3 + 117 hypothetical protein - none -
fig|6666666.229907.peg.1659 CDS AEJO02000044.1 23290 23643 1 + 354 hypothetical protein - none -
fig|6666666.229907.peg.1660 CDS AEJO02000044.1 24298 23810 -1 - 489 Probable lipoprotein nlpC precursor - none -
fig|6666666.229907.peg.1661 CDS AEJO02000044.1 24646 24350 -1 - 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229907.peg.1662 CDS AEJO02000044.1 27040 24650 -1 - 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229907.peg.1663 CDS AEJO02000044.1 28049 27060 -2 - 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229907.peg.1664 CDS AEJO02000044.1 29264 28389 -2 - 876 Probable protease htpX homolog - none -
fig|6666666.229907.peg.1665 CDS AEJO02000044.1 29946 30881 3 + 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) KDO2-Lipid A biosynthesis
fig|6666666.229907.peg.1666 CDS AEJO02000044.1 30881 31435 2 + 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) KDO2-Lipid A biosynthesis
fig|6666666.229907.peg.1667 CDS AEJO02000044.1 31601 33148 2 + 1548 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229907.peg.1668 CDS AEJO02000044.1 33159 33746 3 + 588 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229907.peg.1669 CDS AEJO02000045.1 2619 310 -3 - 2310 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229907.peg.1670 CDS AEJO02000045.1 3530 2787 -2 - 744 Putative membrane protein YeiH - none -
fig|6666666.229907.peg.1671 CDS AEJO02000045.1 9741 3970 -3 - 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229907.peg.1672 CDS AEJO02000045.1 11255 9807 -2 - 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229907.peg.1673 CDS AEJO02000045.1 12412 11552 -1 - 861 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229907.peg.1674 CDS AEJO02000045.1 12849 12409 -3 - 441 ABC transporter ATP-binding protein - none -
fig|6666666.229907.peg.1675 CDS AEJO02000045.1 13023 12865 -3 - 159 ABC transporter ATP-binding protein - none -
fig|6666666.229907.peg.1676 CDS AEJO02000045.1 13823 13026 -2 - 798 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229907.peg.1677 CDS AEJO02000045.1 14532 13798 -3 - 735 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229907.peg.1678 CDS AEJO02000045.1 15011 15196 2 + 186 Mobile element protein - none -
fig|6666666.229907.peg.1679 CDS AEJO02000045.1 15238 15486 1 + 249 Mobile element protein - none -
fig|6666666.229907.peg.1680 CDS AEJO02000045.1 17006 15573 -2 - 1434 Putative GTP-binding protein YdgA - none -
fig|6666666.229907.peg.1681 CDS AEJO02000045.1 17295 19196 3 + 1902 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229907.peg.1682 CDS AEJO02000045.1 19631 20758 2 + 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229907.peg.1683 CDS AEJO02000045.1 21183 20836 -3 - 348 Programmed cell death toxin ChpB - none -
fig|6666666.229907.peg.1684 CDS AEJO02000045.1 21440 21183 -2 - 258 hypothetical protein - none -
fig|6666666.229907.peg.1685 CDS AEJO02000045.1 22637 21585 -2 - 1053 Outer membrane protein P2 precursor (OMP P2) - none -
fig|6666666.229907.peg.1686 CDS AEJO02000045.1 24041 22851 -2 - 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229907.peg.1687 CDS AEJO02000045.1 24296 24853 2 + 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.1688 CDS AEJO02000045.1 25379 25510 2 + 132 Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like - none -
fig|6666666.229907.peg.1689 CDS AEJO02000045.1 26122 25544 -1 - 579 Mobile element protein - none -
fig|6666666.229907.peg.1690 CDS AEJO02000045.1 26598 26365 -3 - 234 Mobile element protein - none -
fig|6666666.229907.peg.1691 CDS AEJO02000046.1 1135 65 -1 - 1071 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229907.peg.1692 CDS AEJO02000046.1 2442 1363 -3 - 1080 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229907.peg.1693 CDS AEJO02000046.1 3832 3005 -1 - 828 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229907.peg.1694 CDS AEJO02000046.1 4341 4460 3 + 120 hypothetical protein - none -
fig|6666666.229907.peg.1695 CDS AEJO02000046.1 4673 4431 -2 - 243 DNA-damage-inducible protein d - none -
fig|6666666.229907.peg.1696 CDS AEJO02000046.1 6278 4854 -2 - 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229907.peg.1697 CDS AEJO02000046.1 7824 6289 -3 - 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229907.peg.1698 CDS AEJO02000046.1 8117 8842 2 + 726 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229907.peg.1699 CDS AEJO02000046.1 9090 10277 3 + 1188 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229907.peg.1700 CDS AEJO02000046.1 11113 11259 1 + 147 hypothetical protein - none -
fig|6666666.229907.peg.1701 CDS AEJO02000046.1 12221 11301 -2 - 921 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229907.peg.1702 CDS AEJO02000046.1 12607 12221 -1 - 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229907.peg.1703 CDS AEJO02000046.1 15631 13139 -1 - 2493 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229907.peg.1704 CDS AEJO02000046.1 17143 15647 -1 - 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229907.peg.1705 CDS AEJO02000046.1 17626 17171 -1 - 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229907.peg.1706 CDS AEJO02000046.1 18355 18537 1 + 183 hypothetical protein - none -
fig|6666666.229907.peg.1707 CDS AEJO02000047.1 569 159 -2 - 411 Mercuric resistance operon regulatory protein - none -
fig|6666666.229907.peg.1708 CDS AEJO02000047.1 1001 690 -2 - 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229907.peg.1709 CDS AEJO02000047.1 1147 1410 1 + 264 hypothetical protein - none -
fig|6666666.229907.peg.1710 CDS AEJO02000047.1 1420 4182 1 + 2763 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229907.peg.1711 CDS AEJO02000047.1 4259 4663 2 + 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229907.peg.1712 CDS AEJO02000047.1 6189 5155 -3 - 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229907.peg.1713 CDS AEJO02000047.1 6692 6189 -2 - 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229907.peg.1714 CDS AEJO02000047.1 6681 6809 3 + 129 hypothetical protein - none -
fig|6666666.229907.peg.1715 CDS AEJO02000047.1 9422 6834 -2 - 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229907.peg.1716 CDS AEJO02000047.1 9570 9400 -3 - 171 hypothetical protein - none -
fig|6666666.229907.peg.1717 CDS AEJO02000047.1 9658 9542 -1 - 117 hypothetical protein - none -
fig|6666666.229907.peg.1718 CDS AEJO02000047.1 10170 9613 -3 - 558 FIG00696423: hypothetical protein - none -
fig|6666666.229907.peg.1719 CDS AEJO02000047.1 10491 10198 -3 - 294 nucleotidyltransferase - none -
fig|6666666.229907.peg.1720 CDS AEJO02000047.1 10894 10475 -1 - 420 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229907.peg.1721 CDS AEJO02000047.1 11812 10985 -1 - 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229907.peg.1722 CDS AEJO02000047.1 12691 11828 -1 - 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229907.peg.1723 CDS AEJO02000047.1 13701 12769 -3 - 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229907.peg.1724 CDS AEJO02000047.1 14302 13766 -1 - 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229907.peg.1725 CDS AEJO02000047.1 14851 14441 -1 - 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229907.peg.1726 CDS AEJO02000047.1 14964 15575 3 + 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229907.peg.1727 CDS AEJO02000047.1 15599 16966 2 + 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229907.peg.1728 CDS AEJO02000047.1 16935 17195 3 + 261 hypothetical protein - none -
fig|6666666.229907.peg.1729 CDS AEJO02000047.1 17188 17937 1 + 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229907.peg.1730 CDS AEJO02000047.1 18182 18051 -2 - 132 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229907.peg.1731 CDS AEJO02000047.1 18458 18186 -2 - 273 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229907.peg.1732 CDS AEJO02000047.1 18596 19720 2 + 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229907.peg.1733 CDS AEJO02000047.1 19735 20565 1 + 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229907.peg.1734 CDS AEJO02000047.1 20918 21052 2 + 135 hypothetical protein - none -
fig|6666666.229907.peg.1735 CDS AEJO02000047.1 22584 21205 -3 - 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229907.peg.1736 CDS AEJO02000047.1 22738 23532 1 + 795 FIG001154: CcsA-related protein - none -
fig|6666666.229907.peg.1737 CDS AEJO02000047.1 23607 24869 3 + 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229907.peg.1738 CDS AEJO02000047.1 25044 25514 3 + 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229907.peg.1739 CDS AEJO02000047.1 25518 25964 3 + 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229907.peg.1740 CDS AEJO02000047.1 25974 26759 3 + 786 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229907.peg.1741 CDS AEJO02000047.1 27323 26847 -2 - 477 Zn-dependent protease with chaperone function - none -
fig|6666666.229907.peg.1742 CDS AEJO02000047.1 27619 27302 -1 - 318 Zn-dependent protease with chaperone function - none -
fig|6666666.229907.peg.1743 CDS AEJO02000047.1 28222 27695 -1 - 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229907.peg.1744 CDS AEJO02000047.1 28384 29628 1 + 1245 Tryptophan-specific transport protein - none -
fig|6666666.229907.peg.1745 CDS AEJO02000047.1 29905 30222 1 + 318 hypothetical protein - none -
fig|6666666.229907.peg.1746 CDS AEJO02000047.1 31309 30602 -1 - 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229907.peg.1747 CDS AEJO02000047.1 31524 32051 3 + 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229907.peg.1748 CDS AEJO02000047.1 32072 33403 2 + 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229907.peg.1749 CDS AEJO02000047.1 33469 35052 1 + 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229907.peg.1750 CDS AEJO02000047.1 35118 35894 3 + 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229907.peg.1751 CDS AEJO02000047.1 35912 36406 2 + 495 Protein yfbU - none -
fig|6666666.229907.peg.1752 CDS AEJO02000048.1 711 541 -3 - 171 hypothetical protein - none -
fig|6666666.229907.peg.1753 CDS AEJO02000048.1 1591 854 -1 - 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229907.peg.1754 CDS AEJO02000048.1 3993 1588 -3 - 2406 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229907.peg.1755 CDS AEJO02000048.1 4243 5298 1 + 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229907.peg.1756 CDS AEJO02000048.1 5368 6441 1 + 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229907.peg.1757 CDS AEJO02000048.1 6441 6929 3 + 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229907.peg.1758 CDS AEJO02000048.1 7389 7039 -3 - 351 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.229907.peg.1759 CDS AEJO02000048.1 8164 7415 -1 - 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229907.peg.1760 CDS AEJO02000048.1 8757 8230 -3 - 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229907.peg.1761 CDS AEJO02000048.1 9031 8783 -1 - 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229907.peg.1762 CDS AEJO02000048.1 9217 9372 1 + 156 hypothetical protein - none -
fig|6666666.229907.peg.1763 CDS AEJO02000048.1 10827 9526 -3 - 1302 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229907.peg.1764 CDS AEJO02000048.1 11576 10842 -2 - 735 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229907.peg.1765 CDS AEJO02000048.1 11570 11875 2 + 306 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229907.peg.1766 CDS AEJO02000048.1 12169 12744 1 + 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229907.peg.1767 CDS AEJO02000048.1 13570 12782 -1 - 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229907.peg.1768 CDS AEJO02000048.1 13677 14651 3 + 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229907.peg.1769 CDS AEJO02000048.1 14653 15390 1 + 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229907.peg.1770 CDS AEJO02000048.1 15759 15908 3 + 150 hypothetical protein - none -
fig|6666666.229907.peg.1771 CDS AEJO02000048.1 16679 16822 2 + 144 hypothetical protein - none -
fig|6666666.229907.peg.1772 CDS AEJO02000048.1 18354 17125 -3 - 1230 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229907.peg.1773 CDS AEJO02000048.1 19098 18397 -3 - 702 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229907.peg.1774 CDS AEJO02000048.1 19822 19163 -1 - 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229907.peg.1775 CDS AEJO02000048.1 20232 19939 -3 - 294 COG1872 - none -
fig|6666666.229907.peg.1776 CDS AEJO02000048.1 20817 20257 -3 - 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229907.peg.1777 CDS AEJO02000048.1 21780 20833 -3 - 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229907.peg.1778 CDS AEJO02000048.1 21782 21901 2 + 120 hypothetical protein - none -
fig|6666666.229907.peg.1779 CDS AEJO02000048.1 24141 22687 -3 - 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229907.peg.1780 CDS AEJO02000048.1 24162 24308 3 + 147 hypothetical protein - none -
fig|6666666.229907.peg.1781 CDS AEJO02000048.1 25155 24697 -3 - 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229907.peg.1782 CDS AEJO02000048.1 25866 25168 -3 - 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229907.peg.1783 CDS AEJO02000048.1 27603 26119 -3 - 1485 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229907.peg.1784 CDS AEJO02000048.1 28494 27685 -3 - 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229907.peg.1785 CDS AEJO02000048.1 28960 28532 -1 - 429 hypothetical protein - none -
fig|6666666.229907.peg.1786 CDS AEJO02000048.1 31028 29022 -2 - 2007 oligopeptide transporter - none -
fig|6666666.229907.peg.1787 CDS AEJO02000048.1 31397 32023 2 + 627 membrane protein ykgB - none -
fig|6666666.229907.peg.1788 CDS AEJO02000048.1 32094 32975 3 + 882 Transcriptional regulator, AraC family - none -
fig|6666666.229907.peg.1789 CDS AEJO02000048.1 33570 32980 -3 - 591 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229907.peg.1790 CDS AEJO02000048.1 33609 34268 3 + 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229907.peg.1791 CDS AEJO02000048.1 34281 34697 3 + 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229907.peg.1792 CDS AEJO02000048.1 34765 35640 1 + 876 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229907.peg.1793 CDS AEJO02000049.1 13 132 1 + 120 hypothetical protein - none -
fig|6666666.229907.peg.1794 CDS AEJO02000049.1 1337 621 -2 - 717 COG1720: Uncharacterized conserved protein tRNA modification Bacteria
fig|6666666.229907.peg.1795 CDS AEJO02000049.1 1465 2370 1 + 906 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229907.peg.1796 CDS AEJO02000049.1 2421 2921 3 + 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229907.peg.1797 CDS AEJO02000049.1 2942 3106 2 + 165 hypothetical protein - none -
fig|6666666.229907.peg.1798 CDS AEJO02000049.1 3111 4502 3 + 1392 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229907.peg.1799 CDS AEJO02000049.1 5093 4560 -2 - 534 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229907.peg.1800 CDS AEJO02000049.1 5210 6571 2 + 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229907.peg.1801 CDS AEJO02000049.1 6810 7349 3 + 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229907.peg.1802 CDS AEJO02000049.1 8559 7420 -3 - 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229907.peg.1803 CDS AEJO02000049.1 9620 8556 -2 - 1065 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229907.peg.1804 CDS AEJO02000050.1 1561 101 -1 - 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229907.peg.1805 CDS AEJO02000050.1 1601 2140 2 + 540 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229907.peg.1806 CDS AEJO02000050.1 4571 2229 -2 - 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229907.peg.1807 CDS AEJO02000050.1 5197 4637 -1 - 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229907.peg.1808 CDS AEJO02000050.1 5397 6002 3 + 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229907.peg.1809 CDS AEJO02000050.1 7305 6055 -3 - 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229907.peg.1810 CDS AEJO02000050.1 7442 7323 -2 - 120 hypothetical protein - none -
fig|6666666.229907.peg.1811 CDS AEJO02000050.1 7565 7879 2 + 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229907.peg.1812 CDS AEJO02000050.1 7876 9765 1 + 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229907.peg.1813 CDS AEJO02000050.1 9862 12282 1 + 2421 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229907.peg.1814 CDS AEJO02000050.1 13251 12337 -3 - 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229907.peg.1815 CDS AEJO02000051.1 69 200 3 + 132 hypothetical protein - none -
fig|6666666.229907.peg.1816 CDS AEJO02000051.1 1037 552 -2 - 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229907.peg.1817 CDS AEJO02000051.1 1541 1077 -2 - 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229907.peg.1818 CDS AEJO02000051.1 2328 1543 -3 - 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229907.peg.1819 CDS AEJO02000051.1 2479 2658 1 + 180 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229907.peg.1820 CDS AEJO02000051.1 2639 3298 2 + 660 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229907.peg.1821 CDS AEJO02000051.1 3994 3362 -1 - 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229907.peg.1822 CDS AEJO02000051.1 4890 4021 -3 - 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.1823 CDS AEJO02000051.1 5111 6400 2 + 1290 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229907.peg.1824 CDS AEJO02000051.1 6393 7568 3 + 1176 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229907.peg.1825 CDS AEJO02000051.1 7549 8199 1 + 651 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229907.peg.1826 CDS AEJO02000051.1 8217 8957 3 + 741 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229907.peg.1827 CDS AEJO02000052.1 13 696 1 + 684 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229907.peg.1828 CDS AEJO02000052.1 736 1635 1 + 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229907.peg.1829 CDS AEJO02000052.1 1645 2499 1 + 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation;
KDO2-Lipid A biosynthesis
fig|6666666.229907.peg.1830 CDS AEJO02000052.1 2679 3188 3 + 510 probable lipoprotein NlpC - none -
fig|6666666.229907.peg.1831 CDS AEJO02000052.1 3837 3586 -3 - 252 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229907.peg.1832 CDS AEJO02000052.1 3921 4583 3 + 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229907.peg.1833 CDS AEJO02000052.1 5150 4605 -2 - 546 FIG00696317: hypothetical protein - none -
fig|6666666.229907.peg.1834 CDS AEJO02000052.1 5841 5374 -3 - 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229907.peg.1835 CDS AEJO02000052.1 7191 5854 -3 - 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229907.peg.1836 CDS AEJO02000052.1 8046 7219 -3 - 828 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229907.peg.1837 CDS AEJO02000052.1 9298 8216 -1 - 1083 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229907.peg.1838 CDS AEJO02000053.1 211 375 1 + 165 Probable phospholipase protein - none -
fig|6666666.229907.peg.1839 CDS AEJO02000053.1 564 2327 3 + 1764 Probable phospholipase protein - none -
fig|6666666.229907.peg.1840 CDS AEJO02000053.1 2327 2515 2 + 189 hypothetical protein - none -
fig|6666666.229907.peg.1841 CDS AEJO02000053.1 2753 3499 2 + 747 FOG: TPR repeat, SEL1 subfamily - none -
fig|6666666.229907.peg.1842 CDS AEJO02000054.1 63 395 3 + 333 hypothetical protein - none -
fig|6666666.229907.peg.1843 CDS AEJO02000054.1 395 2275 2 + 1881 hypothetical protein - none -
fig|6666666.229907.peg.1844 CDS AEJO02000054.1 2275 3258 1 + 984 hypothetical protein - none -
fig|6666666.229907.peg.1845 CDS AEJO02000054.1 3268 4266 1 + 999 hypothetical protein - none -
fig|6666666.229907.peg.1846 CDS AEJO02000054.1 4330 4557 1 + 228 hypothetical protein - none -
fig|6666666.229907.peg.1847 CDS AEJO02000054.1 5420 4839 -2 - 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229907.peg.1848 CDS AEJO02000054.1 6439 5510 -1 - 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.1849 CDS AEJO02000054.1 7071 6439 -3 - 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.1850 CDS AEJO02000054.1 7690 7082 -1 - 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.1851 CDS AEJO02000054.1 9569 7701 -2 - 1869 Putative transport protein - none -
fig|6666666.229907.peg.1852 CDS AEJO02000054.1 10208 9609 -2 - 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229907.peg.1853 CDS AEJO02000054.1 11385 10201 -3 - 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229907.peg.1854 CDS AEJO02000054.1 12258 11470 -3 - 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229907.peg.1855 CDS AEJO02000054.1 12689 12279 -2 - 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229907.peg.1856 CDS AEJO02000054.1 13848 12826 -3 - 1023 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229907.peg.1857 CDS AEJO02000054.1 14423 13848 -2 - 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229907.peg.1858 CDS AEJO02000054.1 16939 14528 -1 - 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229907.peg.1859 CDS AEJO02000054.1 18292 16958 -1 - 1335 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage CBSS-83331.1.peg.3039;
Periplasmic Stress Response
fig|6666666.229907.peg.1860 CDS AEJO02000054.1 19170 18301 -3 - 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.1861 CDS AEJO02000054.1 19904 19185 -2 - 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229907.peg.1862 CDS AEJO02000054.1 21209 19926 -2 - 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229907.peg.1863 CDS AEJO02000054.1 21795 21238 -3 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229907.peg.1864 CDS AEJO02000054.1 21952 21809 -1 - 144 hypothetical protein - none -
fig|6666666.229907.peg.1865 CDS AEJO02000054.1 22733 22020 -2 - 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229907.peg.1866 CDS AEJO02000054.1 22878 22765 -3 - 114 hypothetical protein - none -
fig|6666666.229907.peg.1867 CDS AEJO02000054.1 24548 22890 -2 - 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229907.peg.1868 CDS AEJO02000054.1 24672 26489 3 + 1818 ABC transporter ATP-binding protein - none -
fig|6666666.229907.peg.1869 CDS AEJO02000054.1 27350 27195 -2 - 156 Probable tonB-dependent receptor HI1217 precursor - none -
fig|6666666.229907.peg.1870 CDS AEJO02000054.1 29138 27372 -2 - 1767 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229907.peg.1871 CDS AEJO02000054.1 29256 29125 -3 - 132 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229907.peg.1872 CDS AEJO02000054.1 29831 29292 -2 - 540 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229907.peg.1873 CDS AEJO02000054.1 30921 30166 -3 - 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229907.peg.1874 CDS AEJO02000054.1 31858 30983 -1 - 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229907.peg.1875 CDS AEJO02000054.1 31901 32215 2 + 315 Uncharacterized protein PM1437 - none -
fig|6666666.229907.peg.1876 CDS AEJO02000054.1 32553 32227 -3 - 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229907.peg.1877 CDS AEJO02000054.1 33218 32565 -2 - 654 FIG00903983: hypothetical protein - none -
fig|6666666.229907.peg.1878 CDS AEJO02000054.1 34852 33239 -1 - 1614 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229907.peg.1879 CDS AEJO02000054.1 34996 35535 1 + 540 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229907.peg.1880 CDS AEJO02000054.1 35540 36091 2 + 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229907.peg.1881 CDS AEJO02000054.1 36095 36895 2 + 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229907.peg.1882 CDS AEJO02000054.1 37771 36890 -1 - 882 Protein rarD - none -
fig|6666666.229907.peg.1883 CDS AEJO02000054.1 37989 37804 -3 - 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229907.peg.1884 CDS AEJO02000054.1 38621 38929 2 + 309 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229907.peg.1885 CDS AEJO02000054.1 39093 39209 3 + 117 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229907.peg.1886 CDS AEJO02000054.1 39388 39525 1 + 138 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229907.peg.1887 CDS AEJO02000054.1 39678 40148 3 + 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229907.peg.1888 CDS AEJO02000054.1 40263 42365 3 + 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229907.peg.1889 CDS AEJO02000055.1 17 985 2 + 969 Glycerol-3-phosphate transporter - none -
fig|6666666.229907.peg.1890 CDS AEJO02000055.1 1217 2299 2 + 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229907.peg.1891 CDS AEJO02000055.1 3473 2355 -2 - 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
YrdC-YciO-Sua5 protein family
fig|6666666.229907.peg.1892 CDS AEJO02000055.1 3701 3504 -2 - 198 hypothetical protein - none -
fig|6666666.229907.peg.1893 CDS AEJO02000055.1 4140 3691 -3 - 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome LSU bacterial
fig|6666666.229907.peg.1894 CDS AEJO02000055.1 4386 4156 -3 - 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229907.peg.1895 CDS AEJO02000055.1 4725 4399 -3 - 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229907.peg.1896 CDS AEJO02000055.1 5089 4712 -1 - 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229907.peg.1897 CDS AEJO02000055.1 5864 5241 -2 - 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229907.peg.1898 CDS AEJO02000055.1 6072 8510 3 + 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.1899 CDS AEJO02000055.1 10395 8551 -3 - 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229907.peg.1900 CDS AEJO02000055.1 11400 10483 -3 - 918 transcriptional regulator MtrA - none -
fig|6666666.229907.peg.1901 CDS AEJO02000055.1 11504 11845 2 + 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229907.peg.1902 CDS AEJO02000055.1 12985 11942 -1 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229907.peg.1903 CDS AEJO02000055.1 13039 13800 1 + 762 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229907.peg.1904 CDS AEJO02000055.1 14343 13849 -3 - 495 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229907.peg.1905 CDS AEJO02000055.1 15627 14344 -3 - 1284 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] - none -
fig|6666666.229907.peg.1906 CDS AEJO02000055.1 15726 16487 3 + 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229907.peg.1907 CDS AEJO02000055.1 16841 16545 -2 - 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.1908 CDS AEJO02000055.1 16992 16858 -3 - 135 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.1909 CDS AEJO02000055.1 18618 17251 -3 - 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229907.peg.1910 CDS AEJO02000055.1 18804 19880 3 + 1077 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229907.peg.1911 CDS AEJO02000055.1 20168 19947 -2 - 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229907.peg.1912 CDS AEJO02000055.1 20275 20970 1 + 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229907.peg.1913 CDS AEJO02000055.1 21087 22250 3 + 1164 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229907.peg.1914 CDS AEJO02000055.1 22315 23394 1 + 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229907.peg.1915 CDS AEJO02000055.1 23569 23396 -1 - 174 hypothetical protein - none -
fig|6666666.229907.peg.1916 CDS AEJO02000055.1 23603 24745 2 + 1143 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229907.peg.1917 CDS AEJO02000055.1 24738 25661 3 + 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229907.peg.1918 CDS AEJO02000055.1 26517 25699 -3 - 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229907.peg.1919 CDS AEJO02000055.1 26736 27533 3 + 798 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229907.peg.1920 CDS AEJO02000055.1 27530 27670 2 + 141 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229907.peg.1921 CDS AEJO02000055.1 27875 27759 -2 - 117 hypothetical protein - none -
fig|6666666.229907.peg.1922 CDS AEJO02000056.1 28 156 1 + 129 hypothetical protein - none -
fig|6666666.229907.peg.1923 CDS AEJO02000056.1 2434 161 -1 - 2274 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229907.peg.1924 CDS AEJO02000056.1 2666 4267 2 + 1602 Dca - none -
fig|6666666.229907.peg.1925 CDS AEJO02000056.1 4377 4231 -3 - 147 hypothetical protein - none -
fig|6666666.229907.peg.1926 CDS AEJO02000056.1 4526 5092 2 + 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229907.peg.1927 CDS AEJO02000056.1 5102 6334 2 + 1233 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229907.peg.1928 CDS AEJO02000056.1 6720 6397 -3 - 324 FIG074102: hypothetical protein - none -
fig|6666666.229907.peg.1929 CDS AEJO02000056.1 6913 6713 -1 - 201 Phage-related protein - none -
fig|6666666.229907.peg.1930 CDS AEJO02000056.1 8025 7180 -3 - 846 membrane protein, putative - none -
fig|6666666.229907.peg.1931 CDS AEJO02000056.1 10257 8098 -3 - 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229907.peg.1932 CDS AEJO02000056.1 10556 10344 -2 - 213 Copper chaperone Copper homeostasis
fig|6666666.229907.peg.1933 CDS AEJO02000056.1 10815 11036 3 + 222 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229907.peg.1934 CDS AEJO02000056.1 11251 11442 1 + 192 Mobile element protein - none -
fig|6666666.229907.peg.1935 CDS AEJO02000056.1 11605 11853 1 + 249 Mobile element protein - none -
fig|6666666.229907.peg.1936 CDS AEJO02000056.1 12300 12521 3 + 222 probable transcription regulator - none -
fig|6666666.229907.peg.1937 CDS AEJO02000056.1 17038 12770 -1 - 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229907.peg.1938 CDS AEJO02000056.1 21169 17141 -1 - 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229907.peg.1939 CDS AEJO02000056.1 21811 21440 -1 - 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229907.peg.1940 CDS AEJO02000056.1 22354 21863 -1 - 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229907.peg.1941 CDS AEJO02000056.1 22695 22525 -3 - 171 hypothetical protein - none -
fig|6666666.229907.peg.1942 CDS AEJO02000056.1 23399 22710 -2 - 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229907.peg.1943 CDS AEJO02000056.1 23832 23404 -3 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229907.peg.1944 CDS AEJO02000056.1 24539 23988 -2 - 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229907.peg.1945 CDS AEJO02000056.1 24951 24541 -3 - 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229907.peg.1946 CDS AEJO02000056.1 26090 25482 -2 - 609 hypothetical protein - none -
fig|6666666.229907.peg.1947 CDS AEJO02000056.1 26305 26150 -1 - 156 Mobile element protein - none -
fig|6666666.229907.peg.1948 CDS AEJO02000056.1 26528 26277 -2 - 252 Mobile element protein - none -
fig|6666666.229907.peg.1949 CDS AEJO02000056.1 26815 26534 -1 - 282 hypothetical protein - none -
fig|6666666.229907.peg.1950 CDS AEJO02000056.1 28103 26907 -2 - 1197 hypothetical protein - none -
fig|6666666.229907.peg.1951 CDS AEJO02000056.1 28990 28106 -1 - 885 hypothetical protein - none -
fig|6666666.229907.peg.1952 CDS AEJO02000057.1 55 777 1 + 723 hypothetical protein - none -
fig|6666666.229907.peg.1953 CDS AEJO02000058.1 97 1038 1 + 942 hypothetical protein - none -
fig|6666666.229907.peg.1954 CDS AEJO02000058.1 1035 1679 3 + 645 hypothetical protein - none -
fig|6666666.229907.peg.1955 CDS AEJO02000058.1 1871 2002 2 + 132 hypothetical protein - none -
fig|6666666.229907.peg.1956 CDS AEJO02000058.1 2281 2556 1 + 276 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229907.peg.1957 CDS AEJO02000058.1 2553 4877 3 + 2325 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229907.peg.1958 CDS AEJO02000059.1 875 618 -2 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229907.peg.1959 CDS AEJO02000059.1 1066 875 -1 - 192 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.229907.peg.1960 CDS AEJO02000059.1 1476 1066 -3 - 411 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.229907.peg.1961 CDS AEJO02000059.1 2197 1490 -1 - 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229907.peg.1962 CDS AEJO02000059.1 2546 2214 -2 - 333 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.229907.peg.1963 CDS AEJO02000059.1 2832 2557 -3 - 276 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229907.peg.1964 CDS AEJO02000059.1 3678 2857 -3 - 822 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.229907.peg.1965 CDS AEJO02000059.1 4001 3699 -2 - 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.229907.peg.1966 CDS AEJO02000059.1 4600 3998 -1 - 603 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.229907.peg.1967 CDS AEJO02000059.1 5242 4616 -1 - 627 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.229907.peg.1968 CDS AEJO02000059.1 5570 5259 -2 - 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229907.peg.1969 CDS AEJO02000059.1 6716 5820 -2 - 897 Transcriptional regulators, LysR family - none -
fig|6666666.229907.peg.1970 CDS AEJO02000059.1 7054 7644 1 + 591 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229907.peg.1971 CDS AEJO02000059.1 7656 8321 3 + 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229907.peg.1972 CDS AEJO02000059.1 8324 9667 2 + 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229907.peg.1973 CDS AEJO02000059.1 9685 10866 1 + 1182 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.229907.peg.1974 CDS AEJO02000059.1 11431 10964 -1 - 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229907.peg.1975 CDS AEJO02000059.1 13051 11522 -1 - 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229907.peg.1976 CDS AEJO02000059.1 14100 13168 -3 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229907.peg.1977 CDS AEJO02000059.1 14571 14110 -3 - 462 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229907.peg.1978 CDS AEJO02000062.1 21 419 3 + 399 hypothetical protein - none -
fig|6666666.229907.peg.1979 CDS AEJO02000062.1 457 3405 1 + 2949 hypothetical protein - none -
fig|6666666.229907.peg.1980 CDS AEJO02000062.1 3409 4587 1 + 1179 hypothetical protein - none -
fig|6666666.229907.peg.1981 CDS AEJO02000065.1 4915 425 -1 - 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229907.peg.1982 CDS AEJO02000065.1 5655 4915 -3 - 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229907.peg.1983 CDS AEJO02000065.1 9137 5676 -2 - 3462 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229907.peg.1984 CDS AEJO02000065.1 9289 9152 -1 - 138 hypothetical protein - none -
fig|6666666.229907.peg.1985 CDS AEJO02000065.1 10645 9317 -1 - 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229907.peg.1986 CDS AEJO02000065.1 11704 10823 -1 - 882 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229907.peg.1987 CDS AEJO02000065.1 12460 11852 -1 - 609 lipoprotein HlpB - none -
fig|6666666.229907.peg.1988 CDS AEJO02000065.1 12895 12608 -1 - 288 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.229907.peg.1989 CDS AEJO02000065.1 13109 13714 2 + 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229907.peg.1990 CDS AEJO02000065.1 13668 13808 3 + 141 hypothetical protein - none -
fig|6666666.229907.peg.1991 CDS AEJO02000065.1 16298 13833 -2 - 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229907.peg.1992 CDS AEJO02000065.1 17861 16422 -2 - 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229907.peg.1993 CDS AEJO02000065.1 18082 17945 -1 - 138 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229907.peg.1994 CDS AEJO02000065.1 19373 18063 -2 - 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229907.peg.1995 CDS AEJO02000065.1 21409 19400 -1 - 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229907.peg.1996 CDS AEJO02000065.1 23601 21406 -3 - 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229907.peg.1997 CDS AEJO02000065.1 24158 23589 -2 - 570 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229907.peg.1998 CDS AEJO02000065.1 25365 24616 -3 - 750 hypothetical protein - none -
fig|6666666.229907.peg.1999 CDS AEJO02000065.1 25904 25716 -2 - 189 hypothetical protein - none -
fig|6666666.229907.peg.2000 CDS AEJO02000066.1 1192 224 -1 - 969 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229907.peg.2001 CDS AEJO02000066.1 1550 2563 2 + 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229907.peg.2002 CDS AEJO02000066.1 2658 3098 3 + 441 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229907.peg.2003 CDS AEJO02000066.1 3098 3343 2 + 246 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229907.peg.2004 CDS AEJO02000066.1 3344 3799 2 + 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229907.peg.2005 CDS AEJO02000066.1 4029 4640 3 + 612 Stringent starvation protein A Carbon Starvation
fig|6666666.229907.peg.2006 CDS AEJO02000066.1 4652 5113 2 + 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229907.peg.2007 CDS AEJO02000066.1 6679 5276 -1 - 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.229907.peg.2008 CDS AEJO02000066.1 6875 8104 2 + 1230 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229907.peg.2009 CDS AEJO02000066.1 8181 8909 3 + 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229907.peg.2010 CDS AEJO02000066.1 10573 8999 -1 - 1575 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229907.peg.2011 CDS AEJO02000066.1 11587 10622 -1 - 966 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229907.peg.2012 CDS AEJO02000066.1 11831 13348 2 + 1518 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229907.peg.2013 CDS AEJO02000066.1 13357 14388 1 + 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229907.peg.2014 CDS AEJO02000066.1 14402 15406 2 + 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229907.peg.2015 CDS AEJO02000066.1 15431 16528 2 + 1098 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229907.peg.2016 CDS AEJO02000066.1 16547 17425 2 + 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229907.peg.2017 CDS AEJO02000066.1 17458 17760 1 + 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229907.peg.2018 CDS AEJO02000066.1 19270 17864 -1 - 1407 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229907.peg.2019 CDS AEJO02000066.1 20686 19556 -1 - 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229907.peg.2020 CDS AEJO02000066.1 22361 20676 -2 - 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229907.peg.2021 CDS AEJO02000066.1 23443 22637 -1 - 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229907.peg.2022 CDS AEJO02000066.1 24639 23446 -3 - 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229907.peg.2023 CDS AEJO02000066.1 25386 24649 -3 - 738 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229907.peg.2024 CDS AEJO02000066.1 25374 25586 3 + 213 hypothetical protein - none -
fig|6666666.229907.peg.2025 CDS AEJO02000066.1 26092 27600 1 + 1509 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229907.peg.2026 CDS AEJO02000066.1 27569 28537 2 + 969 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229907.peg.2027 CDS AEJO02000066.1 30245 28941 -2 - 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229907.peg.2028 CDS AEJO02000066.1 32052 30256 -3 - 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229907.peg.2029 CDS AEJO02000066.1 32334 32068 -3 - 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229907.peg.2030 CDS AEJO02000066.1 33634 33359 -1 - 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229907.peg.2031 CDS AEJO02000066.1 33951 33664 -3 - 288 Hydrogenase-2 operon protein hybE - none -
fig|6666666.229907.peg.2032 CDS AEJO02000066.1 35520 34090 -3 - 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229907.peg.2033 CDS AEJO02000066.1 35807 35529 -2 - 279 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.2034 CDS AEJO02000066.1 36095 35817 -2 - 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229907.peg.2035 CDS AEJO02000066.1 37007 36294 -2 - 714 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229907.peg.2036 CDS AEJO02000066.1 37360 37019 -1 - 342 putative - none -
fig|6666666.229907.peg.2037 CDS AEJO02000067.1 195 58 -3 - 138 hypothetical protein - none -
fig|6666666.229907.peg.2038 CDS AEJO02000067.1 992 213 -2 - 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229907.peg.2039 CDS AEJO02000067.1 1368 1847 3 + 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229907.peg.2040 CDS AEJO02000067.1 2054 1848 -2 - 207 hypothetical protein - none -
fig|6666666.229907.peg.2041 CDS AEJO02000067.1 2323 2676 1 + 354 LSU ribosomal protein L20p Ribosome LSU bacterial
fig|6666666.229907.peg.2042 CDS AEJO02000067.1 3562 3443 -1 - 120 hypothetical protein - none -
fig|6666666.229907.peg.2043 CDS AEJO02000067.1 3653 4606 2 + 954 Tagatose 1,6-bisphosphate aldolase (EC 4.1.2.40) - none -
fig|6666666.229907.peg.2044 CDS AEJO02000067.1 4621 6588 1 + 1968 Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144) - none -
fig|6666666.229907.peg.2045 CDS AEJO02000067.1 6585 6821 3 + 237 PTS system, galactitol-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.229907.peg.2046 CDS AEJO02000067.1 6844 7824 1 + 981 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) - none -
fig|6666666.229907.peg.2047 CDS AEJO02000070.1 7 1668 1 + 1662 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229907.peg.2048 CDS AEJO02000070.1 1794 3017 3 + 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229907.peg.2049 CDS AEJO02000070.1 3203 4372 2 + 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229907.peg.2050 CDS AEJO02000070.1 4383 5255 3 + 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229907.peg.2051 CDS AEJO02000071.1 108 407 3 + 300 hypothetical protein - none -
fig|6666666.229907.peg.2052 CDS AEJO02000071.1 581 784 2 + 204 hypothetical protein - none -
fig|6666666.229907.peg.2053 CDS AEJO02000072.1 1060 395 -1 - 666 hypothetical protein - none -
fig|6666666.229907.peg.2054 CDS AEJO02000072.1 1851 1072 -3 - 780 hypothetical protein - none -
fig|6666666.229907.peg.2055 CDS AEJO02000073.1 1076 213 -2 - 864 hypothetical protein - none -
fig|6666666.229907.peg.2056 CDS AEJO02000073.1 2048 1341 -2 - 708 hypothetical protein - none -
fig|6666666.229907.peg.2057 CDS AEJO02000073.1 2910 2005 -3 - 906 Phage endolysin Phage lysis modules
fig|6666666.229907.peg.2058 CDS AEJO02000074.1 407 922 2 + 516 Phage tail protein Phage tail proteins
fig|6666666.229907.peg.2059 CDS AEJO02000074.1 1586 1170 -2 - 417 hypothetical protein - none -
fig|6666666.229907.peg.2060 CDS AEJO02000074.1 2398 1769 -1 - 630 hypothetical protein - none -
fig|6666666.229907.peg.2061 CDS AEJO02000074.1 3512 2829 -2 - 684 transcriptional activator-regulatory protein - none -
fig|6666666.229907.peg.2062 CDS AEJO02000074.1 3911 4111 2 + 201 hypothetical protein - none -
fig|6666666.229907.peg.2063 CDS AEJO02000074.1 4296 4508 3 + 213 hypothetical protein - none -
fig|6666666.229907.peg.2064 CDS AEJO02000074.1 4511 4873 2 + 363 Phage protein - none -
fig|6666666.229907.peg.2065 CDS AEJO02000074.1 4882 5826 1 + 945 FIG00696091: hypothetical protein - none -
fig|6666666.229907.peg.2066 CDS AEJO02000074.1 5839 6627 1 + 789 FIG00696091: hypothetical protein - none -
fig|6666666.229907.peg.2067 CDS AEJO02000074.1 6737 7144 2 + 408 Adenine-specific methyltransferase (EC 2.1.1.72) CBSS-257314.1.peg.752
fig|6666666.229907.peg.2068 CDS AEJO02000074.1 7148 7501 2 + 354 Phage DNA-binding protein Phage packaging machinery
fig|6666666.229907.peg.2069 CDS AEJO02000075.1 895 629 -1 - 267 Probable phospholipase protein - none -
fig|6666666.229907.peg.2070 CDS AEJO02000077.1 251 538 2 + 288 hypothetical protein - none -
fig|6666666.229907.peg.2071 CDS AEJO02000078.1 304 2619 1 + 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229907.peg.2072 CDS AEJO02000078.1 4124 2667 -2 - 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229907.peg.2073 CDS AEJO02000078.1 5158 4130 -1 - 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229907.peg.2074 CDS AEJO02000078.1 6661 5174 -1 - 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229907.peg.2075 CDS AEJO02000078.1 6824 7765 2 + 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229907.peg.2076 CDS AEJO02000079.1 1510 1334 -1 - 177 hypothetical protein - none -
fig|6666666.229907.peg.2077 CDS AEJO02000079.1 2097 1519 -3 - 579 hypothetical protein - none -
fig|6666666.229907.peg.2078 CDS AEJO02000079.1 2592 2101 -3 - 492 hypothetical protein - none -
fig|6666666.229907.peg.2079 CDS AEJO02000080.1 1694 792 -2 - 903 hypothetical protein - none -
fig|6666666.229907.peg.2080 CDS AEJO02000081.1 140 850 2 + 711 FIG00698721: hypothetical protein - none -
fig|6666666.229907.peg.2081 CDS AEJO02000081.1 1775 1182 -2 - 594 Mobile element protein - none -
fig|6666666.229907.peg.2082 CDS AEJO02000081.1 2154 1990 -3 - 165 Mobile element protein - none -
fig|6666666.229907.peg.2083 CDS AEJO02000081.1 5336 4332 -2 - 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229907.peg.2084 CDS AEJO02000081.1 5507 6217 2 + 711 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229907.peg.2085 CDS AEJO02000081.1 6275 6541 2 + 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229907.peg.2086 CDS AEJO02000081.1 6587 8710 2 + 2124 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229907.peg.2087 CDS AEJO02000081.1 8712 10793 3 + 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229907.peg.2088 CDS AEJO02000081.1 10786 11280 1 + 495 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229907.peg.2089 CDS AEJO02000081.1 11314 12141 1 + 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229907.peg.2090 CDS AEJO02000082.1 321 157 -3 - 165 hypothetical protein - none -
fig|6666666.229907.peg.2091 CDS AEJO02000082.1 519 968 3 + 450 ImpA - none -
fig|6666666.229907.peg.2092 CDS AEJO02000082.1 1374 1201 -3 - 174 hypothetical protein - none -
fig|6666666.229907.peg.2093 CDS AEJO02000082.1 3142 1676 -1 - 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain Purine conversions;
Purine salvage cluster
fig|6666666.229907.peg.2094 CDS AEJO02000082.1 3284 4216 2 + 933 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin biosynthesis;
Biotin synthesis cluster;
Biotin synthesis cluster
fig|6666666.229907.peg.2095 CDS AEJO02000082.1 4303 4506 1 + 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229907.peg.2096 CDS AEJO02000083.1 247 405 1 + 159 hypothetical protein - none -
fig|6666666.229907.peg.2097 CDS AEJO02000083.1 558 2639 3 + 2082 VgrG-3 protein - none -
fig|6666666.229907.peg.2098 CDS AEJO02000085.1 153 539 3 + 387 hypothetical protein - none -
fig|6666666.229907.peg.2099 CDS AEJO02000085.1 579 1325 3 + 747 FOG: TPR repeat, SEL1 subfamily - none -
fig|6666666.229907.peg.2100 CDS AEJO02000085.1 1370 1489 2 + 120 hypothetical protein - none -
fig|6666666.229907.peg.2101 CDS AEJO02000085.1 3298 1760 -1 - 1539 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229907.peg.2102 CDS AEJO02000085.1 3719 3354 -2 - 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229907.peg.2103 CDS AEJO02000085.1 3861 5900 3 + 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229907.peg.2104 CDS AEJO02000085.1 6526 6026 -1 - 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229907.peg.2105 CDS AEJO02000085.1 8314 6587 -1 - 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229907.peg.2106 CDS AEJO02000085.1 8688 8431 -3 - 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229907.peg.2107 CDS AEJO02000085.1 9949 8909 -1 - 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229907.peg.2108 CDS AEJO02000085.1 10021 10569 1 + 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229907.peg.2109 CDS AEJO02000085.1 11265 10858 -3 - 408 putative lipoprotein - none -
fig|6666666.229907.peg.2110 CDS AEJO02000085.1 12662 11409 -2 - 1254 putative exported protein - none -
fig|6666666.229907.peg.2111 CDS AEJO02000085.1 13533 12673 -3 - 861 FIG00698030: hypothetical protein - none -
fig|6666666.229907.peg.2112 CDS AEJO02000085.1 14165 13533 -2 - 633 Possible exported protein - none -
fig|6666666.229907.peg.2113 CDS AEJO02000085.1 14548 14177 -1 - 372 FIG00696467: hypothetical protein - none -
fig|6666666.229907.peg.2114 CDS AEJO02000085.1 14974 14567 -1 - 408 FIG00696269: hypothetical protein - none -
fig|6666666.229907.peg.2115 CDS AEJO02000085.1 15230 14991 -2 - 240 hypothetical protein - none -
fig|6666666.229907.peg.2116 CDS AEJO02000085.1 15553 15230 -1 - 324 FIG00696053: hypothetical protein - none -
fig|6666666.229907.peg.2117 CDS AEJO02000085.1 15901 15788 -1 - 114 hypothetical protein - none -
fig|6666666.229907.peg.2118 CDS AEJO02000085.1 16603 17364 1 + 762 DUF1526 domain-containing protein - none -
fig|6666666.229907.peg.2119 CDS AEJO02000085.1 18531 17971 -3 - 561 Cytolethal distending toxin subunit C Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229907.peg.2120 CDS AEJO02000085.1 19393 18542 -1 - 852 Cytolethal distending toxin subunit B Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229907.peg.2121 CDS AEJO02000085.1 20076 19408 -3 - 669 Cytolethal distending toxin subunit A Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229907.peg.2122 CDS AEJO02000085.1 20985 20641 -3 - 345 Programmed cell death toxin MazF - none -
fig|6666666.229907.peg.2123 CDS AEJO02000085.1 21992 21813 -2 - 180 hypothetical protein - none -
fig|6666666.229907.peg.2124 CDS AEJO02000085.1 22485 22306 -3 - 180 Haemophilus-specific protein, uncharacterized - none -
fig|6666666.229907.peg.2125 CDS AEJO02000085.1 22779 24689 3 + 1911 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229907.peg.2126 CDS AEJO02000085.1 24773 25594 2 + 822 probable phage integrase - none -
fig|6666666.229907.peg.2127 CDS AEJO02000085.1 26107 27621 1 + 1515 Dca - none -
fig|6666666.229907.peg.2128 CDS AEJO02000085.1 27650 28267 2 + 618 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229907.peg.2129 CDS AEJO02000085.1 28254 29762 3 + 1509 putative integral membrane protein - none -
fig|6666666.229907.peg.2130 CDS AEJO02000085.1 29774 30682 2 + 909 RfbJ protein - none -
fig|6666666.229907.peg.2131 CDS AEJO02000085.1 31070 32863 2 + 1794 Mlr4739 protein - none -
fig|6666666.229907.peg.2132 CDS AEJO02000085.1 33044 32916 -2 - 129 hypothetical protein - none -
fig|6666666.229907.peg.2133 CDS AEJO02000085.1 33019 33513 1 + 495 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229907.peg.2134 CDS AEJO02000085.1 33510 34997 3 + 1488 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229907.peg.2135 CDS AEJO02000085.1 34997 36847 2 + 1851 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229907.peg.2136 CDS AEJO02000085.1 36862 37806 1 + 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229907.peg.2137 CDS AEJO02000085.1 37926 38222 3 + 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229907.peg.2138 CDS AEJO02000085.1 38237 38545 2 + 309 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229907.peg.2139 CDS AEJO02000085.1 39559 38600 -1 - 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229907.peg.2140 CDS AEJO02000085.1 40722 39643 -3 - 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229907.peg.2141 CDS AEJO02000085.1 42150 40735 -3 - 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229907.peg.2142 CDS AEJO02000085.1 42416 44047 2 + 1632 Peptide transport periplasmic protein SapA Peptide ABC transport system Sap
fig|6666666.229907.peg.2143 CDS AEJO02000085.1 44047 45012 1 + 966 Peptide transport system permease protein SapB Peptide ABC transport system Sap
fig|6666666.229907.peg.2144 CDS AEJO02000085.1 45002 45889 2 + 888 Peptide transport system permease protein SapC Peptide ABC transport system Sap
fig|6666666.229907.peg.2145 CDS AEJO02000085.1 45897 46949 3 + 1053 Peptide transport system ATP-binding protein SapD Peptide ABC transport system Sap
fig|6666666.229907.peg.2146 CDS AEJO02000085.1 46953 47771 3 + 819 Peptide transport system ATP-binding protein SapF Peptide ABC transport system Sap
fig|6666666.229907.peg.2147 CDS AEJO02000086.1 298 897 1 + 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229907.peg.2148 CDS AEJO02000086.1 900 1697 3 + 798 Protein of unknown function DUF81 - none -
fig|6666666.229907.peg.2149 CDS AEJO02000086.1 1706 2503 2 + 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229907.peg.2150 CDS AEJO02000086.1 2500 3351 1 + 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229907.peg.2151 CDS AEJO02000086.1 3377 3502 2 + 126 hypothetical protein - none -
fig|6666666.229907.peg.2152 CDS AEJO02000086.1 3676 4203 1 + 528 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229907.peg.2153 CDS AEJO02000086.1 4827 4429 -3 - 399 hypothetical protein - none -
fig|6666666.229907.peg.2154 CDS AEJO02000086.1 6256 5138 -1 - 1119 FOG: TPR repeat, SEL1 subfamily - none -
fig|6666666.229907.peg.2155 CDS AEJO02000086.1 6558 6292 -3 - 267 Probable phospholipase protein - none -
fig|6666666.229907.peg.2156 CDS AEJO02000087.1 122 250 2 + 129 hypothetical protein - none -
fig|6666666.229907.peg.2157 CDS AEJO02000087.1 254 403 2 + 150 hypothetical protein - none -
fig|6666666.229907.peg.2158 CDS AEJO02000087.1 777 1091 3 + 315 VgrG-3 protein - none -
fig|6666666.229907.peg.2159 CDS AEJO02000088.1 907 152 -1 - 756 Short chain dehydrogenase - none -
fig|6666666.229907.peg.2160 CDS AEJO02000088.1 1513 1001 -1 - 513 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229907.peg.2161 CDS AEJO02000088.1 2031 1594 -3 - 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229907.peg.2162 CDS AEJO02000088.1 2997 2041 -3 - 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229907.peg.2163 CDS AEJO02000088.1 3664 3080 -1 - 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229907.peg.2164 CDS AEJO02000088.1 4278 3703 -3 - 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229907.peg.2165 CDS AEJO02000088.1 4665 4411 -3 - 255 YgfY COG2938 - none -
fig|6666666.229907.peg.2166 CDS AEJO02000088.1 5034 4705 -3 - 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229907.peg.2167 CDS AEJO02000088.1 6815 5100 -2 - 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229907.peg.2168 CDS AEJO02000088.1 6959 8353 2 + 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229907.peg.2169 CDS AEJO02000088.1 8350 10209 1 + 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229907.peg.2170 CDS AEJO02000088.1 10255 11157 1 + 903 hypothetical protein - none -
fig|6666666.229907.peg.2171 CDS AEJO02000089.1 10882 11541 1 + 660 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229907.peg.2172 CDS AEJO02000089.1 11538 12389 3 + 852 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229907.peg.2173 CDS AEJO02000089.1 12409 13500 1 + 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229907.peg.2174 CDS AEJO02000089.1 15716 13887 -2 - 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229907.peg.2175 CDS AEJO02000089.1 16618 15845 -1 - 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229907.peg.2176 CDS AEJO02000089.1 16799 16620 -2 - 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229907.peg.2177 CDS AEJO02000089.1 17795 16821 -2 - 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229907.peg.2178 CDS AEJO02000089.1 19562 17814 -2 - 1749 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229907.peg.2179 CDS AEJO02000089.1 21843 19609 -3 - 2235 DNA internalization-related competence protein ComEC/Rec2 KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229907.peg.2180 CDS AEJO02000089.1 22336 22773 1 + 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229907.peg.2181 CDS AEJO02000089.1 22890 24356 3 + 1467 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229907.peg.2182 CDS AEJO02000089.1 24349 24849 1 + 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229907.peg.2183 CDS AEJO02000089.1 25281 24895 -3 - 387 hypothetical protein - none -
fig|6666666.229907.peg.2184 CDS AEJO02000089.1 27762 25627 -3 - 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229907.peg.2185 CDS AEJO02000089.1 29034 27832 -3 - 1203 Acetate kinase (EC 2.7.2.1) CBSS-257314.1.peg.752;
Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229907.peg.2186 CDS AEJO02000089.1 29302 29745 1 + 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229907.peg.2187 CDS AEJO02000089.1 29924 30466 2 + 543 Colicin V production protein - none -
fig|6666666.229907.peg.2188 CDS AEJO02000089.1 30534 30653 3 + 120 hypothetical protein - none -
fig|6666666.229907.peg.2189 CDS AEJO02000089.1 32686 30611 -1 - 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229907.peg.2190 CDS AEJO02000089.1 35221 32831 -1 - 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229907.peg.2191 CDS AEJO02000089.1 35390 38104 2 + 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229907.peg.2192 CDS AEJO02000089.1 39132 38257 -3 - 876 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229907.peg.2193 CDS AEJO02000089.1 39511 42168 1 + 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229907.peg.2194 CDS AEJO02000089.1 42197 43867 2 + 1671 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229907.peg.2195 CDS AEJO02000089.1 43904 45385 2 + 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229907.peg.2196 CDS AEJO02000089.1 45590 45471 -2 - 120 hypothetical protein - none -
fig|6666666.229907.peg.2197 CDS AEJO02000089.1 46369 45815 -1 - 555 FIG002003: Protein YdjA - none -
fig|6666666.229907.peg.2198 CDS AEJO02000089.1 46493 48373 2 + 1881 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229907.peg.2199 CDS AEJO02000089.1 48414 48911 3 + 498 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229907.peg.2200 CDS AEJO02000089.1 48920 49540 2 + 621 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229907.peg.2201 CDS AEJO02000089.1 49621 50244 1 + 624 Hypothetical YciO protein, TsaC/YrdC paralog YrdC-YciO-Sua5 protein family
fig|6666666.229907.peg.2202 CDS AEJO02000089.1 50299 51267 1 + 969 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229907.peg.2203 CDS AEJO02000089.1 51298 52269 1 + 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229907.peg.2204 CDS AEJO02000089.1 52354 53181 1 + 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229907.peg.2205 CDS AEJO02000089.1 53784 53296 -3 - 489 putative cytoplasmic protein - none -
fig|6666666.229907.peg.2206 CDS AEJO02000089.1 55085 54087 -2 - 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229907.peg.2207 CDS AEJO02000089.1 56494 55391 -1 - 1104 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229907.peg.2208 CDS AEJO02000089.1 56687 57400 2 + 714 SanA protein - none -
fig|6666666.229907.peg.2209 CDS AEJO02000089.1 58370 57384 -2 - 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229907.peg.2210 CDS AEJO02000091.1 238 122 -1 - 117 hypothetical protein - none -
fig|6666666.229907.peg.2211 CDS AEJO02000091.1 919 260 -1 - 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229907.peg.2212 CDS AEJO02000091.1 1300 1989 1 + 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229907.peg.2213 CDS AEJO02000091.1 2762 2064 -2 - 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229907.peg.2214 CDS AEJO02000091.1 2874 2746 -3 - 129 hypothetical protein - none -
fig|6666666.229907.peg.2215 CDS AEJO02000091.1 2861 4192 2 + 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229907.peg.2216 CDS AEJO02000091.1 4598 5902 2 + 1305 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229907.peg.2217 CDS AEJO02000093.1 645 133 -3 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229907.peg.2218 CDS AEJO02000094.1 895 200 -1 - 696 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229907.peg.2219 CDS AEJO02000094.1 1105 911 -1 - 195 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229907.peg.2220 CDS AEJO02000097.1 1429 326 -1 - 1104 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229907.peg.2221 CDS AEJO02000097.1 1677 1522 -3 - 156 Mobile element protein - none -
fig|6666666.229907.peg.2222 CDS AEJO02000097.1 1734 2345 3 + 612 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229907.peg.2223 CDS AEJO02000097.1 4215 2428 -3 - 1788 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229907.peg.2224 CDS AEJO02000097.1 5244 4342 -3 - 903 Lipoprotein nlpI precursor - none -
fig|6666666.229907.peg.2225 CDS AEJO02000097.1 6288 5329 -3 - 960 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229907.peg.2226 CDS AEJO02000099.1 537 280 -3 - 258 hypothetical protein - none -
fig|6666666.229907.peg.2227 CDS AEJO02000100.1 231 380 3 + 150 hypothetical protein - none -
fig|6666666.229907.peg.2228 CDS AEJO02000101.1 240 40 -3 - 201 Mobile element protein - none -
fig|6666666.229907.peg.2229 CDS AEJO02000101.1 367 242 -1 - 126 Mobile element protein - none -
fig|6666666.229907.peg.2230 CDS AEJO02000102.1 958 476 -1 - 483 hypothetical protein - none -
fig|6666666.229907.peg.2231 CDS AEJO02000103.1 12 131 3 + 120 hypothetical protein - none -
fig|6666666.229907.peg.2232 CDS AEJO02000103.1 144 1169 3 + 1026 hypothetical protein - none -
fig|6666666.229907.peg.2233 CDS AEJO02000105.1 1197 55 -3 - 1143 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229907.peg.2234 CDS AEJO02000107.1 494 60 -2 - 435 hypothetical protein - none -
fig|6666666.229907.peg.2235 CDS AEJO02000109.1 26 1450 2 + 1425 hypothetical protein - none -
fig|6666666.229907.peg.2236 CDS AEJO02000109.1 1568 1422 -2 - 147 hypothetical protein - none -
fig|6666666.229907.peg.2237 CDS AEJO02000111.1 23 829 2 + 807 Lytic enzyme - none -
fig|6666666.229907.peg.2238 CDS AEJO02000111.1 826 1647 1 + 822 hypothetical protein - none -
fig|6666666.229907.peg.2239 CDS AEJO02000112.1 2130 787 -3 - 1344 putative hexose phosphate transport protein - none -
fig|6666666.229907.peg.2240 CDS AEJO02000112.1 2951 2148 -2 - 804 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229907.peg.2241 CDS AEJO02000112.1 3215 4045 2 + 831 5-deoxy-glucuronate isomerase (EC 5.3.1.-) Inositol catabolism
fig|6666666.229907.peg.2242 CDS AEJO02000112.1 4931 4812 -2 - 120 hypothetical protein - none -
fig|6666666.229907.peg.2243 CDS AEJO02000112.1 5155 4976 -1 - 180 hypothetical protein - none -
fig|6666666.229907.peg.2244 CDS AEJO02000114.1 1633 443 -1 - 1191 hypothetical protein - none -
fig|6666666.229907.peg.2245 CDS AEJO02000114.1 3257 1653 -2 - 1605 hypothetical protein - none -
fig|6666666.229907.rna.1 RNA AEJO02000003.1 3236 3163 -2 - 74 tRNA-Arg-TCT - none -
fig|6666666.229907.rna.2 RNA AEJO02000003.1 3346 3273 -1 - 74 tRNA-Pro-TGG - none -
fig|6666666.229907.rna.3 RNA AEJO02000003.1 25584 25674 3 + 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229907.rna.4 RNA AEJO02000004.1 72923 73005 2 + 83 tRNA-Leu-GAG tRNAs
fig|6666666.229907.rna.5 RNA AEJO02000004.1 101184 101267 3 + 84 tRNA-Leu-CAG tRNAs
fig|6666666.229907.rna.6 RNA AEJO02000008.1 27469 27396 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.229907.rna.7 RNA AEJO02000011.1 33680 33608 -2 - 73 tRNA-Val-TAC - none -
fig|6666666.229907.rna.8 RNA AEJO02000011.1 33783 33711 -3 - 73 tRNA-Val-TAC - none -
fig|6666666.229907.rna.9 RNA AEJO02000011.1 33897 33825 -3 - 73 tRNA-Val-TAC - none -
fig|6666666.229907.rna.10 RNA AEJO02000011.1 35710 35782 1 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.229907.rna.11 RNA AEJO02000012.1 88773 88843 3 + 71 tRNA-Pseudo-AAC - none -
fig|6666666.229907.rna.12 RNA AEJO02000012.1 151823 151896 2 + 74 tRNA-Val-GAC tRNAs
fig|6666666.229907.rna.13 RNA AEJO02000014.1 10907 10821 -2 - 87 tRNA-Ser-GGA tRNAs
fig|6666666.229907.rna.14 RNA AEJO02000014.1 57822 57895 3 + 74 tRNA-Met-CAT - none -
fig|6666666.229907.rna.15 RNA AEJO02000018.1 77930 78002 2 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.229907.rna.16 RNA AEJO02000018.1 78010 78082 1 + 73 tRNA-Asn-GTT - none -
fig|6666666.229907.rna.17 RNA AEJO02000019.1 6790 6719 -1 - 72 tRNA-Gln-TTG - none -
fig|6666666.229907.rna.18 RNA AEJO02000019.1 6902 6831 -2 - 72 tRNA-Gln-TTG - none -
fig|6666666.229907.rna.19 RNA AEJO02000019.1 7016 6935 -2 - 82 tRNA-Leu-TAG - none -
fig|6666666.229907.rna.20 RNA AEJO02000019.1 7098 7025 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229907.rna.21 RNA AEJO02000019.1 22934 23006 2 + 73 tRNA-Asn-GTT - none -
fig|6666666.229907.rna.22 RNA AEJO02000019.1 83921 83994 2 + 74 tRNA-Asp-GTC - none -
fig|6666666.229907.rna.23 RNA AEJO02000019.1 84020 84093 2 + 74 tRNA-Asp-GTC - none -
fig|6666666.229907.rna.24 RNA AEJO02000026.1 44351 44424 2 + 74 tRNA-Arg-CCG tRNAs
fig|6666666.229907.rna.25 RNA AEJO02000026.1 44459 44531 2 + 73 tRNA-His-GTG - none -
fig|6666666.229907.rna.26 RNA AEJO02000026.1 44537 44610 2 + 74 tRNA-Pro-TGG - none -
fig|6666666.229907.rna.27 RNA AEJO02000027.1 30897 30824 -3 - 74 tRNA-Lys-CTT - none -
fig|6666666.229907.rna.28 RNA AEJO02000027.1 30998 30926 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.229907.rna.29 RNA AEJO02000027.1 31101 31029 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.229907.rna.30 RNA AEJO02000035.1 8752 8679 -1 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.229907.rna.31 RNA AEJO02000035.1 8883 8810 -3 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.229907.rna.32 RNA AEJO02000035.1 8994 8904 -3 - 91 tRNA-Ser-GCT - none -
fig|6666666.229907.rna.33 RNA AEJO02000039.1 1593 54 -3 - 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229907.rna.34 RNA AEJO02000040.1 5641 5723 1 + 83 tRNA-Leu-CAA tRNAs
fig|6666666.229907.rna.35 RNA AEJO02000042.1 32895 32809 -3 - 87 tRNA-Ser-TGA - none -
fig|6666666.229907.rna.36 RNA AEJO02000042.1 40293 40365 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229907.rna.37 RNA AEJO02000042.1 40377 40447 3 + 71 tRNA-Cys-GCA tRNAs
fig|6666666.229907.rna.38 RNA AEJO02000045.1 25014 25086 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229907.rna.39 RNA AEJO02000045.1 25091 25174 2 + 84 tRNA-Leu-TAA - none -
fig|6666666.229907.rna.40 RNA AEJO02000045.1 25229 25301 2 + 73 tRNA-Lys-TTT - none -
fig|6666666.229907.rna.41 RNA AEJO02000046.1 17858 17785 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.229907.rna.42 RNA AEJO02000050.1 13507 13579 1 + 73 tRNA-Thr-TGT - none -
fig|6666666.229907.rna.43 RNA AEJO02000050.1 13613 13694 2 + 82 tRNA-Tyr-GTA - none -
fig|6666666.229907.rna.44 RNA AEJO02000050.1 13738 13809 1 + 72 tRNA-Gly-TCC - none -
fig|6666666.229907.rna.45 RNA AEJO02000050.1 13816 13888 1 + 73 tRNA-Thr-GGT - none -
fig|6666666.229907.rna.46 RNA AEJO02000063.1 116 1 -2 - 116 5S RNA - none -
fig|6666666.229907.rna.47 RNA AEJO02000063.1 3385 343 -1 - 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229907.rna.48 RNA AEJO02000064.1 188 116 -2 - 73 tRNA-Glu-TTC - none -
fig|6666666.229907.rna.49 RNA AEJO02000085.1 10668 10740 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229907.rna.50 RNA AEJO02000089.1 1 98 1 + 98 5S RNA - none -
fig|6666666.229907.rna.51 RNA AEJO02000089.1 145 264 1 + 120 5S RNA - none -
fig|6666666.229907.rna.52 RNA AEJO02000089.1 271 344 1 + 74 tRNA-Asp-GTC - none -
fig|6666666.229907.rna.53 RNA AEJO02000089.1 382 454 1 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.229907.rna.54 RNA AEJO02000106.1 261 189 -3 - 73 tRNA-Ala-TGC - none -
fig|6666666.229907.rna.55 RNA AEJO02000106.1 387 314 -3 - 74 tRNA-Ile-GAT - none -