fig|6666666.229908.peg.1 CDS CP003496.2 466 71 -1 - 396 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229908.peg.2 CDS CP003496.2 1034 468 -2 - 567 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229908.peg.3 CDS CP003496.2 1392 2405 3 + 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229908.peg.4 CDS CP003496.2 2500 2940 1 + 441 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229908.peg.5 CDS CP003496.2 2940 3185 3 + 246 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229908.peg.6 CDS CP003496.2 3186 3641 3 + 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229908.peg.7 CDS CP003496.2 3841 4482 1 + 642 Stringent starvation protein A Carbon Starvation
fig|6666666.229908.peg.8 CDS CP003496.2 4494 4955 3 + 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229908.peg.9 CDS CP003496.2 6521 5118 -2 - 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn;
tRNA modification Archaea
fig|6666666.229908.peg.10 CDS CP003496.2 6717 7946 3 + 1230 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229908.peg.11 CDS CP003496.2 8023 8751 1 + 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229908.peg.12 CDS CP003496.2 10415 8841 -2 - 1575 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229908.peg.13 CDS CP003496.2 11429 10464 -2 - 966 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229908.peg.14 CDS CP003496.2 11673 13190 3 + 1518 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229908.peg.15 CDS CP003496.2 13199 14230 2 + 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229908.peg.16 CDS CP003496.2 14244 15248 3 + 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229908.peg.17 CDS CP003496.2 15273 16370 3 + 1098 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229908.peg.18 CDS CP003496.2 16389 17267 3 + 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229908.peg.19 CDS CP003496.2 17300 17602 2 + 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229908.peg.20 CDS CP003496.2 19112 17706 -2 - 1407 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229908.peg.21 CDS CP003496.2 20387 19398 -2 - 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229908.peg.22 CDS CP003496.2 22203 20518 -3 - 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229908.peg.23 CDS CP003496.2 23285 22479 -2 - 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229908.peg.24 CDS CP003496.2 24481 23288 -1 - 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229908.peg.25 CDS CP003496.2 25228 24491 -1 - 738 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229908.peg.26 CDS CP003496.2 25216 25428 1 + 213 hypothetical protein - none -
fig|6666666.229908.peg.27 CDS CP003496.2 25934 28378 2 + 2445 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229908.peg.28 CDS CP003496.2 28770 28573 -3 - 198 hypothetical protein - none -
fig|6666666.229908.peg.29 CDS CP003496.2 30086 28782 -2 - 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229908.peg.30 CDS CP003496.2 31893 30097 -3 - 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229908.peg.31 CDS CP003496.2 32175 31909 -3 - 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229908.peg.32 CDS CP003496.2 32838 32957 3 + 120 hypothetical protein - none -
fig|6666666.229908.peg.33 CDS CP003496.2 33475 33200 -1 - 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229908.peg.34 CDS CP003496.2 33669 33505 -3 - 165 Hydrogenase-2 operon protein hybE - none -
fig|6666666.229908.peg.35 CDS CP003496.2 35362 33932 -1 - 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229908.peg.36 CDS CP003496.2 35649 35371 -3 - 279 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.37 CDS CP003496.2 35937 35659 -3 - 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.38 CDS CP003496.2 37033 36032 -1 - 1002 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229908.peg.39 CDS CP003496.2 37437 37045 -3 - 393 putative - none -
fig|6666666.229908.peg.40 CDS CP003496.2 38101 37511 -1 - 591 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229908.peg.41 CDS CP003496.2 39659 38112 -2 - 1548 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229908.peg.42 CDS CP003496.2 40379 39825 -2 - 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) KDO2-Lipid A biosynthesis
fig|6666666.229908.peg.43 CDS CP003496.2 41314 40379 -1 - 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) KDO2-Lipid A biosynthesis
fig|6666666.229908.peg.44 CDS CP003496.2 41960 41811 -2 - 150 hypothetical protein - none -
fig|6666666.229908.peg.45 CDS CP003496.2 41997 42872 3 + 876 Probable protease htpX homolog - none -
fig|6666666.229908.peg.46 CDS CP003496.2 43212 44201 3 + 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229908.peg.47 CDS CP003496.2 44221 46611 1 + 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229908.peg.48 CDS CP003496.2 46615 46911 1 + 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229908.peg.49 CDS CP003496.2 46963 47451 1 + 489 Probable lipoprotein nlpC precursor - none -
fig|6666666.229908.peg.50 CDS CP003496.2 47971 47618 -1 - 354 hypothetical protein - none -
fig|6666666.229908.peg.51 CDS CP003496.2 48128 48012 -2 - 117 hypothetical protein - none -
fig|6666666.229908.peg.52 CDS CP003496.2 49556 48138 -2 - 1419 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229908.peg.53 CDS CP003496.2 50703 49576 -3 - 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229908.peg.54 CDS CP003496.2 53449 50705 -1 - 2745 ABC-type multidrug transport system, permease component - none -
fig|6666666.229908.peg.55 CDS CP003496.2 54432 53452 -3 - 981 HlyD family secretion protein - none -
fig|6666666.229908.peg.56 CDS CP003496.2 54580 55143 1 + 564 Transcriptional regulator, TetR family - none -
fig|6666666.229908.peg.57 CDS CP003496.2 56384 55194 -2 - 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229908.peg.58 CDS CP003496.2 56806 59415 1 + 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229908.peg.59 CDS CP003496.2 59488 60507 1 + 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229908.peg.60 CDS CP003496.2 60521 61357 2 + 837 COG0613, Predicted metal-dependent phosphoesterases (PHP family) YrdC-YciO-Sua5 protein family;
tRNA modification Bacteria
fig|6666666.229908.peg.61 CDS CP003496.2 61595 64201 2 + 2607 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229908.peg.62 CDS CP003496.2 65122 64286 -1 - 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229908.peg.63 CDS CP003496.2 66181 65249 -1 - 933 Universal stress protein E Universal stress protein family
fig|6666666.229908.peg.64 CDS CP003496.2 67072 66299 -1 - 774 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229908.peg.65 CDS CP003496.2 67181 67351 2 + 171 hypothetical protein - none -
fig|6666666.229908.peg.66 CDS CP003496.2 67910 67413 -2 - 498 Ferritin-like protein 2 - none -
fig|6666666.229908.peg.67 CDS CP003496.2 68411 67926 -2 - 486 Ferritin-like protein 2 - none -
fig|6666666.229908.peg.68 CDS CP003496.2 70739 69312 -2 - 1428 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229908.peg.69 CDS CP003496.2 71623 70751 -1 - 873 Integral membrane protein - none -
fig|6666666.229908.peg.70 CDS CP003496.2 76190 71700 -2 - 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229908.peg.71 CDS CP003496.2 76930 76190 -1 - 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229908.peg.72 CDS CP003496.2 80412 76951 -3 - 3462 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229908.peg.73 CDS CP003496.2 80564 80427 -2 - 138 hypothetical protein - none -
fig|6666666.229908.peg.74 CDS CP003496.2 81920 80592 -2 - 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229908.peg.75 CDS CP003496.2 82979 82098 -2 - 882 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229908.peg.76 CDS CP003496.2 83735 83127 -2 - 609 lipoprotein HlpB - none -
fig|6666666.229908.peg.77 CDS CP003496.2 84170 83883 -2 - 288 LSU ribosomal protein L25p Transcription repair cluster
fig|6666666.229908.peg.78 CDS CP003496.2 84384 84989 3 + 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229908.peg.79 CDS CP003496.2 87573 85108 -3 - 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229908.peg.80 CDS CP003496.2 89135 87696 -2 - 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229908.peg.81 CDS CP003496.2 90647 89337 -2 - 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229908.peg.82 CDS CP003496.2 92683 90674 -1 - 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229908.peg.83 CDS CP003496.2 94875 92680 -3 - 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229908.peg.84 CDS CP003496.2 95432 94863 -2 - 570 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229908.peg.85 CDS CP003496.2 96640 95891 -1 - 750 hypothetical protein - none -
fig|6666666.229908.peg.86 CDS CP003496.2 97227 96991 -3 - 237 hypothetical protein - none -
fig|6666666.229908.peg.87 CDS CP003496.2 98393 97182 -2 - 1212 hypothetical protein - none -
fig|6666666.229908.peg.88 CDS CP003496.2 100380 98434 -3 - 1947 ABC transporter ATP-binding protein - none -
fig|6666666.229908.peg.89 CDS CP003496.2 100374 100493 3 + 120 hypothetical protein - none -
fig|6666666.229908.peg.90 CDS CP003496.2 100533 100835 3 + 303 FIG022160: hypothetical toxin - none -
fig|6666666.229908.peg.91 CDS CP003496.2 100837 101130 1 + 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229908.peg.92 CDS CP003496.2 102519 101167 -3 - 1353 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.229908.peg.93 CDS CP003496.2 103213 102521 -1 - 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229908.peg.94 CDS CP003496.2 103572 103213 -3 - 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229908.peg.95 CDS CP003496.2 104109 105200 3 + 1092 Integrase - none -
fig|6666666.229908.peg.96 CDS CP003496.2 105489 105310 -3 - 180 FIG050068: DNA-binding protein - none -
fig|6666666.229908.peg.97 CDS CP003496.2 105931 105512 -1 - 420 Mobile element protein - none -
fig|6666666.229908.peg.98 CDS CP003496.2 106535 105882 -2 - 654 Mobile element protein - none -
fig|6666666.229908.peg.99 CDS CP003496.2 106859 106572 -2 - 288 hypothetical protein - none -
fig|6666666.229908.peg.100 CDS CP003496.2 107087 107884 2 + 798 Mobile element protein - none -
fig|6666666.229908.peg.101 CDS CP003496.2 108873 107881 -3 - 993 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229908.peg.102 CDS CP003496.2 109057 109761 1 + 705 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229908.peg.103 CDS CP003496.2 111302 109845 -2 - 1458 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis;
tRNA modification Archaea;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA modification Bacteria
fig|6666666.229908.peg.104 CDS CP003496.2 111608 112708 2 + 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229908.peg.105 CDS CP003496.2 112769 115249 2 + 2481 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229908.peg.106 CDS CP003496.2 116099 115320 -2 - 780 Protein of unknown function DUF419 - none -
fig|6666666.229908.peg.107 CDS CP003496.2 116329 117786 1 + 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229908.peg.108 CDS CP003496.2 118001 118255 2 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.109 CDS CP003496.2 118252 118404 1 + 153 StbE replicon stabilization toxin - none -
fig|6666666.229908.peg.110 CDS CP003496.2 118388 118534 2 + 147 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.111 CDS CP003496.2 119332 118547 -1 - 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229908.peg.112 CDS CP003496.2 119885 119493 -2 - 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229908.peg.113 CDS CP003496.2 120330 119902 -3 - 429 LSU ribosomal protein L13p (L13Ae) - none -
fig|6666666.229908.peg.114 CDS CP003496.2 121168 120572 -1 - 597 hypothetical protein - none -
fig|6666666.229908.peg.115 CDS CP003496.2 123160 121181 -1 - 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229908.peg.116 CDS CP003496.2 126864 123160 -3 - 3705 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229908.peg.117 CDS CP003496.2 127252 126896 -1 - 357 DsrE-related protein - none -
fig|6666666.229908.peg.118 CDS CP003496.2 128207 127677 -2 - 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229908.peg.119 CDS CP003496.2 130134 128350 -3 - 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229908.peg.120 CDS CP003496.2 130281 130727 3 + 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229908.peg.121 CDS CP003496.2 131003 130794 -2 - 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229908.peg.122 CDS CP003496.2 131358 131194 -3 - 165 hypothetical protein - none -
fig|6666666.229908.peg.123 CDS CP003496.2 132122 131409 -2 - 714 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229908.peg.124 CDS CP003496.2 132433 132119 -1 - 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229908.peg.125 CDS CP003496.2 132541 133323 1 + 783 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229908.peg.126 CDS CP003496.2 133332 134171 3 + 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229908.peg.127 CDS CP003496.2 135473 134223 -2 - 1251 Phosphoglycerate transport system transcriptional regulatory protein PgtA Phosphoglycerate transport system
fig|6666666.229908.peg.128 CDS CP003496.2 136062 135466 -3 - 597 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229908.peg.129 CDS CP003496.2 137359 136019 -1 - 1341 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229908.peg.130 CDS CP003496.2 137505 137356 -3 - 150 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229908.peg.131 CDS CP003496.2 137536 137670 1 + 135 hypothetical protein - none -
fig|6666666.229908.peg.132 CDS CP003496.2 137738 137911 2 + 174 hypothetical protein - none -
fig|6666666.229908.peg.133 CDS CP003496.2 138064 138210 1 + 147 Mobile element protein - none -
fig|6666666.229908.peg.134 CDS CP003496.2 138204 138656 3 + 453 Mobile element protein - none -
fig|6666666.229908.peg.135 CDS CP003496.2 139861 138740 -1 - 1122 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229908.peg.136 CDS CP003496.2 140235 141233 3 + 999 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229908.peg.137 CDS CP003496.2 141255 142334 3 + 1080 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229908.peg.138 CDS CP003496.2 142337 144031 2 + 1695 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229908.peg.139 CDS CP003496.2 144053 145111 2 + 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229908.peg.140 CDS CP003496.2 145674 145237 -3 - 438 Putative transporting ATPase - none -
fig|6666666.229908.peg.141 CDS CP003496.2 147822 145870 -3 - 1953 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229908.peg.142 CDS CP003496.2 148558 147929 -1 - 630 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229908.peg.143 CDS CP003496.2 149562 148693 -3 - 870 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229908.peg.144 CDS CP003496.2 149997 149599 -3 - 399 DNA-binding protein H-NS - none -
fig|6666666.229908.peg.145 CDS CP003496.2 150438 151970 3 + 1533 Na+/H+ antiporter - none -
fig|6666666.229908.peg.146 CDS CP003496.2 152815 152105 -1 - 711 hypothetical protein - none -
fig|6666666.229908.peg.147 CDS CP003496.2 153498 152821 -3 - 678 FIG00904286: hypothetical protein - none -
fig|6666666.229908.peg.148 CDS CP003496.2 153639 153992 3 + 354 Putative translation initiation inhibitor, yjgF family - none -
fig|6666666.229908.peg.149 CDS CP003496.2 155578 154034 -1 - 1545 hypothetical protein - none -
fig|6666666.229908.peg.150 CDS CP003496.2 156534 155581 -3 - 954 Glycosyltransferase - none -
fig|6666666.229908.peg.151 CDS CP003496.2 157568 156678 -2 - 891 hypothetical protein - none -
fig|6666666.229908.peg.152 CDS CP003496.2 159616 157571 -1 - 2046 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229908.peg.153 CDS CP003496.2 160260 159649 -3 - 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229908.peg.154 CDS CP003496.2 161238 160282 -3 - 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229908.peg.155 CDS CP003496.2 162121 161354 -1 - 768 Putative membrane protein YfcA - none -
fig|6666666.229908.peg.156 CDS CP003496.2 162997 162125 -1 - 873 Murein endopeptidase - none -
fig|6666666.229908.peg.157 CDS CP003496.2 164091 163018 -3 - 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229908.peg.158 CDS CP003496.2 167436 164113 -3 - 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229908.peg.159 CDS CP003496.2 168860 167445 -2 - 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229908.peg.160 CDS CP003496.2 169483 168866 -1 - 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229908.peg.161 CDS CP003496.2 169570 170370 1 + 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229908.peg.162 CDS CP003496.2 170790 171314 3 + 525 Flavodoxin 1 Flavodoxin
fig|6666666.229908.peg.163 CDS CP003496.2 171333 171773 3 + 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229908.peg.164 CDS CP003496.2 171941 174604 2 + 2664 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229908.peg.165 CDS CP003496.2 174672 175022 3 + 351 FIG00782386: hypothetical protein - none -
fig|6666666.229908.peg.166 CDS CP003496.2 175373 175056 -2 - 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229908.peg.167 CDS CP003496.2 176071 175379 -1 - 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229908.peg.168 CDS CP003496.2 177291 176101 -3 - 1191 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229908.peg.169 CDS CP003496.2 177587 177291 -2 - 297 Inner membrane protein yciS - none -
fig|6666666.229908.peg.170 CDS CP003496.2 177973 177686 -1 - 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229908.peg.171 CDS CP003496.2 179681 178035 -2 - 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229908.peg.172 CDS CP003496.2 180456 179779 -3 - 678 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229908.peg.173 CDS CP003496.2 181342 180449 -1 - 894 Membrane protein LAPB - none -
fig|6666666.229908.peg.174 CDS CP003496.2 181635 184001 3 + 2367 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229908.peg.175 CDS CP003496.2 184079 186853 2 + 2775 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229908.peg.176 CDS CP003496.2 187252 186920 -1 - 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229908.peg.177 CDS CP003496.2 187981 187253 -1 - 729 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229908.peg.178 CDS CP003496.2 188918 187986 -2 - 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229908.peg.179 CDS CP003496.2 189209 191485 2 + 2277 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229908.peg.180 CDS CP003496.2 192607 192314 -1 - 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229908.peg.181 CDS CP003496.2 193624 192611 -1 - 1014 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229908.peg.182 CDS CP003496.2 194931 193672 -3 - 1260 hypothetical protein - none -
fig|6666666.229908.peg.183 CDS CP003496.2 195516 194986 -3 - 531 hypothetical protein - none -
fig|6666666.229908.peg.184 CDS CP003496.2 196226 195579 -2 - 648 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229908.peg.185 CDS CP003496.2 197295 196402 -3 - 894 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229908.peg.186 CDS CP003496.2 199350 197317 -3 - 2034 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229908.peg.187 CDS CP003496.2 200126 199347 -2 - 780 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229908.peg.188 CDS CP003496.2 202600 200135 -1 - 2466 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229908.peg.189 CDS CP003496.2 202800 205733 3 + 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229908.peg.190 CDS CP003496.2 206068 205769 -1 - 300 Putative transcriptional regulator - none -
fig|6666666.229908.peg.191 CDS CP003496.2 206415 206065 -3 - 351 YPPCP.09C homologue - none -
fig|6666666.229908.peg.192 CDS CP003496.2 206601 206428 -3 - 174 hypothetical protein - none -
fig|6666666.229908.peg.193 CDS CP003496.2 206900 206601 -2 - 300 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229908.peg.194 CDS CP003496.2 208185 206851 -3 - 1335 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229908.peg.195 CDS CP003496.2 208255 208371 1 + 117 hypothetical protein - none -
fig|6666666.229908.peg.196 CDS CP003496.2 208542 209369 3 + 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229908.peg.197 CDS CP003496.2 209457 210794 3 + 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229908.peg.198 CDS CP003496.2 210985 211230 1 + 246 FIG00696862: hypothetical protein - none -
fig|6666666.229908.peg.199 CDS CP003496.2 211463 213232 2 + 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229908.peg.200 CDS CP003496.2 214299 213358 -3 - 942 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229908.peg.201 CDS CP003496.2 214734 214324 -3 - 411 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229908.peg.202 CDS CP003496.2 215167 214721 -1 - 447 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229908.peg.203 CDS CP003496.2 215381 215136 -2 - 246 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229908.peg.204 CDS CP003496.2 215935 215519 -1 - 417 Protein ygiW precursor - none -
fig|6666666.229908.peg.205 CDS CP003496.2 216307 217224 1 + 918 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229908.peg.206 CDS CP003496.2 219396 217420 -3 - 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229908.peg.207 CDS CP003496.2 219626 220525 2 + 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229908.peg.208 CDS CP003496.2 220585 221550 1 + 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229908.peg.209 CDS CP003496.2 221558 222481 2 + 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229908.peg.210 CDS CP003496.2 222494 223252 2 + 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229908.peg.211 CDS CP003496.2 223256 223393 2 + 138 hypothetical protein - none -
fig|6666666.229908.peg.212 CDS CP003496.2 224891 223359 -2 - 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229908.peg.213 CDS CP003496.2 225079 225852 1 + 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229908.peg.214 CDS CP003496.2 225864 226667 3 + 804 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229908.peg.215 CDS CP003496.2 228416 227043 -2 - 1374 sodium-dependent transporter - none -
fig|6666666.229908.peg.216 CDS CP003496.2 228884 228441 -2 - 444 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229908.peg.217 CDS CP003496.2 229078 228926 -1 - 153 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229908.peg.218 CDS CP003496.2 230010 229225 -3 - 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.219 CDS CP003496.2 230623 230003 -1 - 621 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.220 CDS CP003496.2 231709 230630 -1 - 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.221 CDS CP003496.2 234092 231720 -2 - 2373 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.222 CDS CP003496.2 234683 234093 -2 - 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.223 CDS CP003496.2 235264 234683 -1 - 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.224 CDS CP003496.2 236342 235455 -2 - 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229908.peg.225 CDS CP003496.2 236833 236366 -1 - 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229908.peg.226 CDS CP003496.2 236858 236980 2 + 123 hypothetical protein - none -
fig|6666666.229908.peg.227 CDS CP003496.2 237096 238031 3 + 936 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229908.peg.228 CDS CP003496.2 238927 238187 -1 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229908.peg.229 CDS CP003496.2 240293 239274 -2 - 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229908.peg.230 CDS CP003496.2 240755 241660 2 + 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229908.peg.231 CDS CP003496.2 241680 242741 3 + 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229908.peg.232 CDS CP003496.2 242858 243310 2 + 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229908.peg.233 CDS CP003496.2 243310 244434 1 + 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229908.peg.234 CDS CP003496.2 244443 245471 3 + 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229908.peg.235 CDS CP003496.2 245480 246076 2 + 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229908.peg.236 CDS CP003496.2 247540 246143 -1 - 1398 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229908.peg.237 CDS CP003496.2 248486 247707 -2 - 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229908.peg.238 CDS CP003496.2 248714 249478 2 + 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229908.peg.239 CDS CP003496.2 249557 250285 2 + 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229908.peg.240 CDS CP003496.2 250272 251333 3 + 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229908.peg.241 CDS CP003496.2 252968 251478 -2 - 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229908.peg.242 CDS CP003496.2 253105 254223 1 + 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229908.peg.243 CDS CP003496.2 254228 255295 2 + 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229908.peg.244 CDS CP003496.2 255470 256354 2 + 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229908.peg.245 CDS CP003496.2 256504 257319 1 + 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229908.peg.246 CDS CP003496.2 261129 259924 -3 - 1206 hypothetical protein - none -
fig|6666666.229908.peg.247 CDS CP003496.2 262587 261574 -3 - 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229908.peg.248 CDS CP003496.2 263699 262587 -2 - 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229908.peg.249 CDS CP003496.2 264535 263726 -1 - 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229908.peg.250 CDS CP003496.2 265237 264614 -1 - 624 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229908.peg.251 CDS CP003496.2 265899 265234 -3 - 666 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229908.peg.252 CDS CP003496.2 266549 265896 -2 - 654 Substrate-specific component NikM of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229908.peg.253 CDS CP003496.2 267052 266549 -1 - 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229908.peg.254 CDS CP003496.2 267394 267059 -1 - 336 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229908.peg.255 CDS CP003496.2 267755 267531 -2 - 225 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229908.peg.256 CDS CP003496.2 268626 267934 -3 - 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229908.peg.257 CDS CP003496.2 269290 268643 -1 - 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229908.peg.258 CDS CP003496.2 271044 269323 -3 - 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229908.peg.259 CDS CP003496.2 271740 271057 -3 - 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229908.peg.260 CDS CP003496.2 271824 271985 3 + 162 hypothetical protein - none -
fig|6666666.229908.peg.261 CDS CP003496.2 272104 273006 1 + 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229908.peg.262 CDS CP003496.2 273063 274571 3 + 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229908.peg.263 CDS CP003496.2 284383 284658 1 + 276 Mobile element protein - none -
fig|6666666.229908.peg.264 CDS CP003496.2 284741 284935 2 + 195 Mobile element protein - none -
fig|6666666.229908.peg.265 CDS CP003496.2 285019 285168 1 + 150 Mobile element protein - none -
fig|6666666.229908.peg.266 CDS CP003496.2 287106 285763 -3 - 1344 putative hexose phosphate transport protein - none -
fig|6666666.229908.peg.267 CDS CP003496.2 287927 287124 -2 - 804 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229908.peg.268 CDS CP003496.2 288191 289021 2 + 831 5-deoxy-glucuronate isomerase (EC 5.3.1.-) Inositol catabolism
fig|6666666.229908.peg.269 CDS CP003496.2 289620 289757 3 + 138 hypothetical protein - none -
fig|6666666.229908.peg.270 CDS CP003496.2 289906 289778 -1 - 129 hypothetical protein - none -
fig|6666666.229908.peg.271 CDS CP003496.2 291105 289951 -3 - 1155 probable lipoprotein - none -
fig|6666666.229908.peg.272 CDS CP003496.2 292172 291105 -2 - 1068 Probable phospholipase protein - none -
fig|6666666.229908.peg.273 CDS CP003496.2 293308 292169 -1 - 1140 Probable phospholipase protein - none -
fig|6666666.229908.peg.274 CDS CP003496.2 295534 293312 -1 - 2223 VgrG-3 protein - none -
fig|6666666.229908.peg.275 CDS CP003496.2 295701 295531 -3 - 171 hypothetical protein - none -
fig|6666666.229908.peg.276 CDS CP003496.2 295909 296043 1 + 135 hypothetical protein - none -
fig|6666666.229908.peg.277 CDS CP003496.2 296232 297218 3 + 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229908.peg.278 CDS CP003496.2 297915 297202 -3 - 714 SanA protein - none -
fig|6666666.229908.peg.279 CDS CP003496.2 298211 299212 2 + 1002 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229908.peg.280 CDS CP003496.2 299518 300516 1 + 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229908.peg.281 CDS CP003496.2 300818 300952 2 + 135 hypothetical protein - none -
fig|6666666.229908.peg.282 CDS CP003496.2 300985 301305 1 + 321 putative cytoplasmic protein - none -
fig|6666666.229908.peg.283 CDS CP003496.2 302247 301420 -3 - 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229908.peg.284 CDS CP003496.2 303302 302331 -2 - 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229908.peg.285 CDS CP003496.2 304301 303333 -2 - 969 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229908.peg.286 CDS CP003496.2 304979 304356 -2 - 624 Hypothetical YciO protein, TsaC/YrdC paralog YrdC-YciO-Sua5 protein family
fig|6666666.229908.peg.287 CDS CP003496.2 306184 305060 -1 - 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229908.peg.288 CDS CP003496.2 308105 306225 -2 - 1881 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229908.peg.289 CDS CP003496.2 308229 308783 3 + 555 FIG002003: Protein YdjA - none -
fig|6666666.229908.peg.290 CDS CP003496.2 309008 309127 2 + 120 hypothetical protein - none -
fig|6666666.229908.peg.291 CDS CP003496.2 310694 309213 -2 - 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229908.peg.292 CDS CP003496.2 312401 310731 -2 - 1671 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229908.peg.293 CDS CP003496.2 315090 312430 -3 - 2661 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229908.peg.294 CDS CP003496.2 315469 316344 1 + 876 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229908.peg.295 CDS CP003496.2 319211 316497 -2 - 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229908.peg.296 CDS CP003496.2 319380 321770 3 + 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229908.peg.297 CDS CP003496.2 321873 323948 3 + 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229908.peg.298 CDS CP003496.2 323970 324095 3 + 126 hypothetical protein - none -
fig|6666666.229908.peg.299 CDS CP003496.2 324634 324092 -1 - 543 Colicin V production protein - none -
fig|6666666.229908.peg.300 CDS CP003496.2 325256 324813 -2 - 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229908.peg.301 CDS CP003496.2 325524 326726 3 + 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229908.peg.302 CDS CP003496.2 326796 328931 3 + 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229908.peg.303 CDS CP003496.2 329278 329640 1 + 363 hypothetical protein - none -
fig|6666666.229908.peg.304 CDS CP003496.2 330211 329711 -1 - 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229908.peg.305 CDS CP003496.2 331670 330204 -2 - 1467 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229908.peg.306 CDS CP003496.2 332224 331787 -1 - 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229908.peg.307 CDS CP003496.2 332717 334951 2 + 2235 DNA internalization-related competence protein ComEC/Rec2 KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229908.peg.308 CDS CP003496.2 334998 336746 3 + 1749 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229908.peg.309 CDS CP003496.2 336765 337739 3 + 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229908.peg.310 CDS CP003496.2 337761 337940 3 + 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229908.peg.311 CDS CP003496.2 338148 338720 3 + 573 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229908.peg.312 CDS CP003496.2 338849 340678 2 + 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229908.peg.313 CDS CP003496.2 340874 341014 2 + 141 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229908.peg.314 CDS CP003496.2 342156 341065 -3 - 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229908.peg.315 CDS CP003496.2 343027 342176 -1 - 852 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229908.peg.316 CDS CP003496.2 343893 343024 -3 - 870 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229908.peg.317 CDS CP003496.2 344960 343890 -2 - 1071 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229908.peg.318 CDS CP003496.2 346267 345188 -1 - 1080 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229908.peg.319 CDS CP003496.2 347657 346809 -2 - 849 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229908.peg.320 CDS CP003496.2 348166 348285 1 + 120 hypothetical protein - none -
fig|6666666.229908.peg.321 CDS CP003496.2 348498 348256 -3 - 243 DNA-damage-inducible protein d - none -
fig|6666666.229908.peg.322 CDS CP003496.2 350103 348679 -3 - 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229908.peg.323 CDS CP003496.2 351649 350114 -1 - 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229908.peg.324 CDS CP003496.2 351942 352667 3 + 726 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229908.peg.325 CDS CP003496.2 352915 354102 1 + 1188 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229908.peg.326 CDS CP003496.2 354229 354840 1 + 612 hypothetical protein - none -
fig|6666666.229908.peg.327 CDS CP003496.2 354933 355085 3 + 153 hypothetical protein - none -
fig|6666666.229908.peg.328 CDS CP003496.2 356047 355127 -1 - 921 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229908.peg.329 CDS CP003496.2 356433 356047 -3 - 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229908.peg.330 CDS CP003496.2 359457 356965 -3 - 2493 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229908.peg.331 CDS CP003496.2 360969 359473 -3 - 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229908.peg.332 CDS CP003496.2 361452 360997 -3 - 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229908.peg.333 CDS CP003496.2 362181 362363 3 + 183 hypothetical protein - none -
fig|6666666.229908.peg.335 CDS CP003496.2 371194 370121 -1 - 1074 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.229908.peg.336 CDS CP003496.2 371322 372605 3 + 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229908.peg.337 CDS CP003496.2 375272 372681 -2 - 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229908.peg.338 CDS CP003496.2 376144 375344 -1 - 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229908.peg.339 CDS CP003496.2 376278 376619 3 + 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229908.peg.340 CDS CP003496.2 376621 376836 1 + 216 hypothetical protein - none -
fig|6666666.229908.peg.341 CDS CP003496.2 376882 379275 1 + 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229908.peg.342 CDS CP003496.2 379574 381481 2 + 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229908.peg.343 CDS CP003496.2 381524 382045 2 + 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229908.peg.344 CDS CP003496.2 382183 383613 1 + 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229908.peg.345 CDS CP003496.2 383616 384941 3 + 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229908.peg.346 CDS CP003496.2 384928 386067 1 + 1140 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229908.peg.347 CDS CP003496.2 386069 386740 2 + 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229908.peg.348 CDS CP003496.2 386730 387221 3 + 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229908.peg.349 CDS CP003496.2 387228 387539 3 + 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229908.peg.350 CDS CP003496.2 387740 388405 2 + 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229908.peg.351 CDS CP003496.2 388583 388383 -2 - 201 hypothetical protein - none -
fig|6666666.229908.peg.352 CDS CP003496.2 388735 389769 1 + 1035 ATPase domain protein - none -
fig|6666666.229908.peg.353 CDS CP003496.2 393905 389856 -2 - 4050 HrpA-like helicases - none -
fig|6666666.229908.peg.354 CDS CP003496.2 394291 393902 -1 - 390 COG2363 - none -
fig|6666666.229908.peg.355 CDS CP003496.2 394894 394292 -1 - 603 putative membrane protein - none -
fig|6666666.229908.peg.356 CDS CP003496.2 395198 394869 -2 - 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229908.peg.357 CDS CP003496.2 396556 395516 -1 - 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229908.peg.358 CDS CP003496.2 397041 400094 3 + 3054 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229908.peg.359 CDS CP003496.2 400104 400526 3 + 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229908.peg.360 CDS CP003496.2 400519 401583 1 + 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229908.peg.361 CDS CP003496.2 401624 402124 2 + 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229908.peg.362 CDS CP003496.2 402229 402116 -1 - 114 hypothetical protein - none -
fig|6666666.229908.peg.363 CDS CP003496.2 403474 402329 -1 - 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229908.peg.364 CDS CP003496.2 404333 403530 -2 - 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229908.peg.365 CDS CP003496.2 405366 404488 -3 - 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229908.peg.366 CDS CP003496.2 406245 405376 -3 - 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229908.peg.367 CDS CP003496.2 407142 406255 -3 - 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229908.peg.368 CDS CP003496.2 407857 407156 -1 - 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229908.peg.369 CDS CP003496.2 408099 409085 3 + 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229908.peg.370 CDS CP003496.2 409149 410999 3 + 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229908.peg.371 CDS CP003496.2 411137 412267 2 + 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229908.peg.372 CDS CP003496.2 412516 413982 1 + 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229908.peg.373 CDS CP003496.2 414513 414683 3 + 171 hypothetical protein - none -
fig|6666666.229908.peg.374 CDS CP003496.2 414680 416596 2 + 1917 VgrG-3 protein - none -
fig|6666666.229908.peg.375 CDS CP003496.2 416612 417040 2 + 429 hypothetical protein - none -
fig|6666666.229908.peg.376 CDS CP003496.2 417037 418353 1 + 1317 hypothetical protein - none -
fig|6666666.229908.peg.377 CDS CP003496.2 418914 419624 3 + 711 hypothetical protein - none -
fig|6666666.229908.peg.378 CDS CP003496.2 419807 420751 2 + 945 hypothetical protein - none -
fig|6666666.229908.peg.379 CDS CP003496.2 421318 421950 1 + 633 hypothetical protein - none -
fig|6666666.229908.peg.380 CDS CP003496.2 423531 423397 -3 - 135 Mobile element protein - none -
fig|6666666.229908.peg.381 CDS CP003496.2 423844 423710 -1 - 135 hypothetical protein - none -
fig|6666666.229908.peg.382 CDS CP003496.2 424147 424326 1 + 180 hypothetical protein - none -
fig|6666666.229908.peg.383 CDS CP003496.2 426333 425155 -3 - 1179 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229908.peg.384 CDS CP003496.2 427744 426440 -1 - 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229908.peg.385 CDS CP003496.2 428631 427930 -3 - 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229908.peg.386 CDS CP003496.2 428652 429350 3 + 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229908.peg.387 CDS CP003496.2 429959 429408 -2 - 552 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229908.peg.388 CDS CP003496.2 430900 429911 -1 - 990 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229908.peg.389 CDS CP003496.2 431426 431088 -2 - 339 FIG00904093: hypothetical protein - none -
fig|6666666.229908.peg.390 CDS CP003496.2 431602 432807 1 + 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229908.peg.391 CDS CP003496.2 432903 434666 3 + 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229908.peg.392 CDS CP003496.2 434836 435246 1 + 411 probable membrane protein YPO3565 - none -
fig|6666666.229908.peg.393 CDS CP003496.2 435374 435204 -2 - 171 hypothetical protein - none -
fig|6666666.229908.peg.394 CDS CP003496.2 435437 436819 2 + 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229908.peg.395 CDS CP003496.2 438080 437010 -2 - 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229908.peg.396 CDS CP003496.2 440349 438307 -3 - 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229908.peg.397 CDS CP003496.2 441992 440961 -2 - 1032 putative membrane protein - none -
fig|6666666.229908.peg.398 CDS CP003496.2 442672 442007 -1 - 666 putative exported protein - none -
fig|6666666.229908.peg.399 CDS CP003496.2 443075 444721 2 + 1647 ABC transporter ATP-binding protein - none -
fig|6666666.229908.peg.400 CDS CP003496.2 445712 444825 -2 - 888 putative adhesin/invasin - none -
fig|6666666.229908.peg.401 CDS CP003496.2 446203 448101 1 + 1899 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229908.peg.402 CDS CP003496.2 448304 448140 -2 - 165 hypothetical protein - none -
fig|6666666.229908.peg.403 CDS CP003496.2 448551 448685 3 + 135 hypothetical protein - none -
fig|6666666.229908.peg.404 CDS CP003496.2 448789 450948 1 + 2160 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229908.peg.405 CDS CP003496.2 451232 451843 2 + 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229908.peg.406 CDS CP003496.2 452732 451908 -2 - 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229908.peg.407 CDS CP003496.2 453980 452922 -2 - 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229908.peg.408 CDS CP003496.2 454173 454763 3 + 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229908.peg.409 CDS CP003496.2 456194 454857 -2 - 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229908.peg.410 CDS CP003496.2 457960 456371 -1 - 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229908.peg.411 CDS CP003496.2 459078 458230 -3 - 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229908.peg.412 CDS CP003496.2 459155 460873 2 + 1719 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229908.peg.413 CDS CP003496.2 460883 461242 2 + 360 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229908.peg.414 CDS CP003496.2 461255 461839 2 + 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229908.peg.415 CDS CP003496.2 461904 462491 3 + 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229908.peg.416 CDS CP003496.2 463289 462597 -2 - 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229908.peg.417 CDS CP003496.2 463506 464576 3 + 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229908.peg.418 CDS CP003496.2 464580 465221 3 + 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229908.peg.419 CDS CP003496.2 465236 465718 2 + 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229908.peg.420 CDS CP003496.2 466050 465850 -3 - 201 Mobile element protein - none -
fig|6666666.229908.peg.421 CDS CP003496.2 466209 466075 -3 - 135 Mobile element protein - none -
fig|6666666.229908.peg.422 CDS CP003496.2 466419 466216 -3 - 204 Mobile element protein - none -
fig|6666666.229908.peg.423 CDS CP003496.2 466547 466720 2 + 174 hypothetical protein - none -
fig|6666666.229908.peg.424 CDS CP003496.2 467002 466856 -1 - 147 hypothetical protein - none -
fig|6666666.229908.peg.425 CDS CP003496.2 467096 468448 2 + 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229908.peg.426 CDS CP003496.2 468478 468663 1 + 186 hypothetical protein - none -
fig|6666666.229908.peg.427 CDS CP003496.2 468704 468976 2 + 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.428 CDS CP003496.2 469286 470845 2 + 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229908.peg.429 CDS CP003496.2 472188 471238 -3 - 951 hypothetical protein - none -
fig|6666666.229908.peg.430 CDS CP003496.2 472660 472382 -1 - 279 Transthyretin-like periplasmic protein - none -
fig|6666666.229908.peg.431 CDS CP003496.2 473970 474923 3 + 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229908.peg.432 CDS CP003496.2 474986 475843 2 + 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229908.peg.433 CDS CP003496.2 475875 477221 3 + 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229908.peg.434 CDS CP003496.2 478580 477249 -2 - 1332 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229908.peg.435 CDS CP003496.2 479091 478705 -3 - 387 Integral membrane protein - none -
fig|6666666.229908.peg.436 CDS CP003496.2 479285 480301 2 + 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization
fig|6666666.229908.peg.437 CDS CP003496.2 480307 480648 1 + 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229908.peg.438 CDS CP003496.2 480655 481230 1 + 576 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229908.peg.439 CDS CP003496.2 481227 481943 3 + 717 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229908.peg.440 CDS CP003496.2 482076 482720 3 + 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229908.peg.441 CDS CP003496.2 482807 482920 2 + 114 hypothetical protein - none -
fig|6666666.229908.peg.442 CDS CP003496.2 484541 483168 -2 - 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229908.peg.443 CDS CP003496.2 485698 484544 -1 - 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229908.peg.444 CDS CP003496.2 485863 486543 1 + 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229908.peg.445 CDS CP003496.2 486569 487834 2 + 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229908.peg.446 CDS CP003496.2 487903 488514 1 + 612 SH3 domain protein - none -
fig|6666666.229908.peg.447 CDS CP003496.2 488514 489791 3 + 1278 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229908.peg.448 CDS CP003496.2 489853 490479 1 + 627 Outer membrane lipoprotein LolB A Gammaproteobacteria Cluster Relating to Translation;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229908.peg.449 CDS CP003496.2 490476 491387 3 + 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229908.peg.450 CDS CP003496.2 491428 492378 1 + 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229908.peg.451 CDS CP003496.2 492555 492701 3 + 147 hypothetical protein - none -
fig|6666666.229908.peg.452 CDS CP003496.2 493002 494147 3 + 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229908.peg.453 CDS CP003496.2 494389 495978 1 + 1590 L-lactate permease Lactate utilization
fig|6666666.229908.peg.454 CDS CP003496.2 496465 496133 -1 - 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229908.peg.455 CDS CP003496.2 496490 496606 2 + 117 hypothetical protein - none -
fig|6666666.229908.peg.456 CDS CP003496.2 496665 497747 3 + 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229908.peg.457 CDS CP003496.2 497822 499093 2 + 1272 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229908.peg.458 CDS CP003496.2 499094 499288 2 + 195 hypothetical protein - none -
fig|6666666.229908.peg.459 CDS CP003496.2 500270 499374 -2 - 897 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.229908.peg.460 CDS CP003496.2 501109 501342 1 + 234 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229908.peg.461 CDS CP003496.2 501353 502684 2 + 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229908.peg.462 CDS CP003496.2 503239 502772 -1 - 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229908.peg.463 CDS CP003496.2 503307 504068 3 + 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229908.peg.464 CDS CP003496.2 504520 504774 1 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.465 CDS CP003496.2 504764 505054 2 + 291 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.466 CDS CP003496.2 505454 505116 -2 - 339 conserved hypothetical protein - none -
fig|6666666.229908.peg.467 CDS CP003496.2 505882 506247 1 + 366 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229908.peg.468 CDS CP003496.2 506418 507806 3 + 1389 Putative protease - none -
fig|6666666.229908.peg.469 CDS CP003496.2 507928 508041 1 + 114 hypothetical protein - none -
fig|6666666.229908.peg.470 CDS CP003496.2 508580 509215 2 + 636 transcriptional regulator, putative - none -
fig|6666666.229908.peg.471 CDS CP003496.2 509356 509640 1 + 285 hypothetical protein - none -
fig|6666666.229908.peg.472 CDS CP003496.2 509652 510725 3 + 1074 FIG00697578: hypothetical protein - none -
fig|6666666.229908.peg.473 CDS CP003496.2 510772 512427 1 + 1656 FIG00698381: hypothetical protein - none -
fig|6666666.229908.peg.474 CDS CP003496.2 512819 514165 2 + 1347 FIG00849539: hypothetical protein - none -
fig|6666666.229908.peg.475 CDS CP003496.2 514438 514848 1 + 411 ABC-type Fe3+-hydroxamate transport system, periplasmic component - none -
fig|6666666.229908.peg.476 CDS CP003496.2 514965 515504 3 + 540 hypothetical protein - none -
fig|6666666.229908.peg.477 CDS CP003496.2 515595 516686 3 + 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229908.peg.478 CDS CP003496.2 517866 516730 -3 - 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229908.peg.479 CDS CP003496.2 518335 519486 1 + 1152 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229908.peg.480 CDS CP003496.2 519778 520077 1 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229908.peg.481 CDS CP003496.2 520108 521958 1 + 1851 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229908.peg.482 CDS CP003496.2 521939 522940 2 + 1002 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229908.peg.483 CDS CP003496.2 523160 525787 2 + 2628 Iron siderophore receptor protein - none -
fig|6666666.229908.peg.484 CDS CP003496.2 526006 525866 -1 - 141 hypothetical protein - none -
fig|6666666.229908.peg.485 CDS CP003496.2 526136 528757 2 + 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229908.peg.486 CDS CP003496.2 529794 528841 -3 - 954 Inositol transport system permease protein Inositol catabolism
fig|6666666.229908.peg.487 CDS CP003496.2 531350 529845 -2 - 1506 Inositol transport system ATP-binding protein Inositol catabolism
fig|6666666.229908.peg.488 CDS CP003496.2 532351 531419 -1 - 933 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229908.peg.489 CDS CP003496.2 533373 532435 -3 - 939 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229908.peg.490 CDS CP003496.2 534814 533675 -1 - 1140 Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229908.peg.491 CDS CP003496.2 536413 534905 -1 - 1509 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) Inositol catabolism
fig|6666666.229908.peg.492 CDS CP003496.2 536630 536743 2 + 114 hypothetical protein - none -
fig|6666666.229908.peg.493 CDS CP003496.2 537153 538499 3 + 1347 CRISPR-associated protein, Csy1 family CRISPRs
fig|6666666.229908.peg.494 CDS CP003496.2 538509 539468 3 + 960 CRISPR-associated protein, Csy2 family CRISPRs
fig|6666666.229908.peg.495 CDS CP003496.2 539468 540478 2 + 1011 CRISPR-associated protein, Csy3 family CRISPRs
fig|6666666.229908.peg.496 CDS CP003496.2 540481 541044 1 + 564 CRISPR-associated protein, Csy4 family CRISPRs
fig|6666666.229908.peg.497 CDS CP003496.2 544377 541090 -3 - 3288 CRISPR-associated helicase Cas3, Yersinia-type CRISPRs
fig|6666666.229908.peg.498 CDS CP003496.2 545339 544374 -2 - 966 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229908.peg.499 CDS CP003496.2 545675 546100 2 + 426 Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229908.peg.500 CDS CP003496.2 546061 546735 1 + 675 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229908.peg.501 CDS CP003496.2 546858 547715 3 + 858 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229908.peg.502 CDS CP003496.2 547806 548594 3 + 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229908.peg.503 CDS CP003496.2 548667 550646 3 + 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229908.peg.504 CDS CP003496.2 551247 550765 -3 - 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229908.peg.505 CDS CP003496.2 551455 551925 1 + 471 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229908.peg.506 CDS CP003496.2 552013 552138 1 + 126 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229908.peg.507 CDS CP003496.2 552172 552615 1 + 444 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229908.peg.508 CDS CP003496.2 552628 554142 1 + 1515 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229908.peg.509 CDS CP003496.2 554286 554567 3 + 282 HipB protein Persister Cells
fig|6666666.229908.peg.510 CDS CP003496.2 554700 554521 -3 - 180 hypothetical protein - none -
fig|6666666.229908.peg.511 CDS CP003496.2 554942 555184 2 + 243 HipA protein Persister Cells
fig|6666666.229908.peg.512 CDS CP003496.2 556074 555181 -3 - 894 hypothetical protein - none -
fig|6666666.229908.peg.513 CDS CP003496.2 559005 556141 -3 - 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229908.peg.514 CDS CP003496.2 559391 559077 -2 - 315 RNA-binding domain protein - none -
fig|6666666.229908.peg.515 CDS CP003496.2 559879 559430 -1 - 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229908.peg.516 CDS CP003496.2 560089 561483 1 + 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229908.peg.517 CDS CP003496.2 561587 562192 2 + 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229908.peg.518 CDS CP003496.2 562435 562244 -1 - 192 hypothetical protein - none -
fig|6666666.229908.peg.519 CDS CP003496.2 563321 562488 -2 - 834 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229908.peg.520 CDS CP003496.2 564146 563412 -2 - 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229908.peg.521 CDS CP003496.2 564273 564536 3 + 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229908.peg.522 CDS CP003496.2 564994 564800 -1 - 195 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229908.peg.523 CDS CP003496.2 565289 566503 2 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229908.peg.524 CDS CP003496.2 567439 566573 -1 - 867 hypothetical protein - none -
fig|6666666.229908.peg.525 CDS CP003496.2 567783 567439 -3 - 345 hypothetical protein - none -
fig|6666666.229908.peg.526 CDS CP003496.2 569874 567796 -3 - 2079 hypothetical protein - none -
fig|6666666.229908.peg.527 CDS CP003496.2 570263 569895 -2 - 369 hypothetical protein - none -
fig|6666666.229908.peg.528 CDS CP003496.2 571276 570320 -1 - 957 hypothetical protein - none -
fig|6666666.229908.peg.529 CDS CP003496.2 572639 571944 -2 - 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229908.peg.530 CDS CP003496.2 573493 572633 -1 - 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229908.peg.531 CDS CP003496.2 574283 573534 -2 - 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229908.peg.532 CDS CP003496.2 575466 574375 -3 - 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229908.peg.533 CDS CP003496.2 575812 577584 1 + 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229908.peg.534 CDS CP003496.2 577639 578100 1 + 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229908.peg.535 CDS CP003496.2 578177 578851 2 + 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229908.peg.536 CDS CP003496.2 579573 578920 -3 - 654 hypothetical protein - none -
fig|6666666.229908.peg.537 CDS CP003496.2 579969 579583 -3 - 387 hypothetical protein - none -
fig|6666666.229908.peg.538 CDS CP003496.2 580775 580098 -2 - 678 hypothetical protein - none -
fig|6666666.229908.peg.539 CDS CP003496.2 581939 580869 -2 - 1071 hypothetical protein - none -
fig|6666666.229908.peg.540 CDS CP003496.2 582250 582062 -1 - 189 VgrG-3 protein - none -
fig|6666666.229908.peg.541 CDS CP003496.2 582631 583470 1 + 840 Predicted transcriptional regulator of the myo-inositol catabolic operon Inositol catabolism
fig|6666666.229908.peg.542 CDS CP003496.2 585417 583507 -3 - 1911 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain Inositol catabolism;
Inositol catabolism
fig|6666666.229908.peg.543 CDS CP003496.2 585419 585586 2 + 168 hypothetical protein - none -
fig|6666666.229908.peg.544 CDS CP003496.2 585729 587675 3 + 1947 Epi-inositol hydrolase (EC 3.7.1.-) Inositol catabolism
fig|6666666.229908.peg.545 CDS CP003496.2 587730 588626 3 + 897 Inosose dehydratase (EC 4.2.1.44) Inositol catabolism
fig|6666666.229908.peg.546 CDS CP003496.2 588629 589639 2 + 1011 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229908.peg.547 CDS CP003496.2 590255 589743 -2 - 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229908.peg.548 CDS CP003496.2 591481 590333 -1 - 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229908.peg.549 CDS CP003496.2 593439 591559 -3 - 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229908.peg.550 CDS CP003496.2 595283 593850 -2 - 1434 Microcin H47 secretion protein - none -
fig|6666666.229908.peg.551 CDS CP003496.2 597421 595298 -1 - 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229908.peg.552 CDS CP003496.2 600657 597490 -3 - 3168 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229908.peg.553 CDS CP003496.2 601176 600670 -3 - 507 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229908.peg.554 CDS CP003496.2 603545 602283 -2 - 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis;
YrdC-YciO-Sua5 protein family
fig|6666666.229908.peg.555 CDS CP003496.2 604222 603680 -1 - 543 hypothetical protein - none -
fig|6666666.229908.peg.556 CDS CP003496.2 604599 604459 -3 - 141 hypothetical protein - none -
fig|6666666.229908.peg.557 CDS CP003496.2 604751 604602 -2 - 150 hypothetical protein - none -
fig|6666666.229908.peg.558 CDS CP003496.2 605842 604838 -1 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229908.peg.559 CDS CP003496.2 605898 606347 3 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229908.peg.560 CDS CP003496.2 606357 606800 3 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229908.peg.561 CDS CP003496.2 610191 606802 -3 - 3390 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229908.peg.562 CDS CP003496.2 610539 610237 -3 - 303 FIG00696353: hypothetical protein - none -
fig|6666666.229908.peg.563 CDS CP003496.2 611209 610514 -1 - 696 FIG00696574: hypothetical protein - none -
fig|6666666.229908.peg.564 CDS CP003496.2 611922 611206 -3 - 717 Type II secretory pathway, component PulJ - none -
fig|6666666.229908.peg.565 CDS CP003496.2 612553 611936 -1 - 618 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229908.peg.566 CDS CP003496.2 613629 613162 -3 - 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229908.peg.567 CDS CP003496.2 614924 613644 -2 - 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229908.peg.568 CDS CP003496.2 616107 614959 -3 - 1149 TolA protein Ton and Tol transport systems
fig|6666666.229908.peg.569 CDS CP003496.2 616546 616124 -1 - 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229908.peg.570 CDS CP003496.2 617321 616632 -2 - 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229908.peg.571 CDS CP003496.2 617755 617351 -1 - 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229908.peg.572 CDS CP003496.2 619409 618273 -2 - 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229908.peg.573 CDS CP003496.2 620884 619424 -1 - 1461 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229908.peg.574 CDS CP003496.2 621441 621752 3 + 312 Chromosome segregation ATPases - none -
fig|6666666.229908.peg.575 CDS CP003496.2 622825 621806 -1 - 1020 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229908.peg.576 CDS CP003496.2 623448 622834 -3 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229908.peg.577 CDS CP003496.2 624084 623512 -3 - 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229908.peg.578 CDS CP003496.2 624550 624140 -1 - 411 excinuclease ABC subunit A - none -
fig|6666666.229908.peg.579 CDS CP003496.2 625302 624562 -3 - 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229908.peg.580 CDS CP003496.2 625707 625336 -3 - 372 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) Folate Biosynthesis
fig|6666666.229908.peg.581 CDS CP003496.2 627156 625888 -3 - 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229908.peg.582 CDS CP003496.2 627430 627564 1 + 135 hypothetical protein - none -
fig|6666666.229908.peg.583 CDS CP003496.2 627632 627805 2 + 174 hypothetical protein - none -
fig|6666666.229908.peg.584 CDS CP003496.2 627958 628104 1 + 147 Mobile element protein - none -
fig|6666666.229908.peg.585 CDS CP003496.2 628098 628562 3 + 465 Mobile element protein - none -
fig|6666666.229908.peg.586 CDS CP003496.2 630583 628805 -1 - 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229908.peg.587 CDS CP003496.2 630791 631318 2 + 528 membrane protein, putative - none -
fig|6666666.229908.peg.588 CDS CP003496.2 631390 632115 1 + 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229908.peg.589 CDS CP003496.2 634762 632195 -1 - 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229908.peg.590 CDS CP003496.2 636236 634905 -2 - 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229908.peg.591 CDS CP003496.2 636637 638589 1 + 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229908.peg.592 CDS CP003496.2 638748 639155 3 + 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229908.peg.593 CDS CP003496.2 639242 639895 2 + 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229908.peg.594 CDS CP003496.2 640247 641599 2 + 1353 Histidine permease YuiF - none -
fig|6666666.229908.peg.595 CDS CP003496.2 641663 642229 2 + 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229908.peg.596 CDS CP003496.2 643711 642287 -1 - 1425 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229908.peg.597 CDS CP003496.2 643819 643938 1 + 120 hypothetical protein - none -
fig|6666666.229908.peg.598 CDS CP003496.2 644048 644197 2 + 150 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) CBSS-87626.3.peg.3639;
Ubiquinone Biosynthesis
fig|6666666.229908.peg.599 CDS CP003496.2 644944 644213 -1 - 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229908.peg.600 CDS CP003496.2 645917 644946 -2 - 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229908.peg.601 CDS CP003496.2 646183 646494 1 + 312 LSU ribosomal protein L21p CBSS-176279.3.peg.868
fig|6666666.229908.peg.602 CDS CP003496.2 646515 646772 3 + 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868
fig|6666666.229908.peg.603 CDS CP003496.2 646843 647775 1 + 933 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229908.peg.604 CDS CP003496.2 647853 648770 3 + 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229908.peg.605 CDS CP003496.2 648807 649982 3 + 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229908.peg.606 CDS CP003496.2 650098 649979 -1 - 120 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229908.peg.607 CDS CP003496.2 650532 650050 -3 - 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229908.peg.608 CDS CP003496.2 650878 650741 -1 - 138 hypothetical protein - none -
fig|6666666.229908.peg.609 CDS CP003496.2 650901 652484 3 + 1584 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229908.peg.610 CDS CP003496.2 652627 653289 1 + 663 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229908.peg.611 CDS CP003496.2 653265 653432 3 + 168 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229908.peg.612 CDS CP003496.2 653401 653547 1 + 147 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229908.peg.613 CDS CP003496.2 653557 654495 1 + 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229908.peg.614 CDS CP003496.2 654505 655488 1 + 984 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229908.peg.615 CDS CP003496.2 655485 656483 3 + 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229908.peg.616 CDS CP003496.2 657298 656591 -1 - 708 Aerobic respiration control protein arcA - none -
fig|6666666.229908.peg.617 CDS CP003496.2 657700 657560 -1 - 141 LSU ribosomal protein L36p - none -
fig|6666666.229908.peg.618 CDS CP003496.2 657976 657710 -1 - 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent - none -
fig|6666666.229908.peg.619 CDS CP003496.2 658756 658187 -1 - 570 Lysine decarboxylase family - none -
fig|6666666.229908.peg.620 CDS CP003496.2 658977 660689 3 + 1713 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229908.peg.621 CDS CP003496.2 660791 660678 -2 - 114 hypothetical protein - none -
fig|6666666.229908.peg.622 CDS CP003496.2 660769 661158 1 + 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229908.peg.623 CDS CP003496.2 664488 661597 -3 - 2892 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229908.peg.624 CDS CP003496.2 664619 664485 -2 - 135 hypothetical protein - none -
fig|6666666.229908.peg.625 CDS CP003496.2 664723 664845 1 + 123 hypothetical protein - none -
fig|6666666.229908.peg.626 CDS CP003496.2 664955 665914 2 + 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229908.peg.627 CDS CP003496.2 666328 666113 -1 - 216 Thioredoxin - none -
fig|6666666.229908.peg.628 CDS CP003496.2 667531 666536 -1 - 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229908.peg.629 CDS CP003496.2 668724 667555 -3 - 1170 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229908.peg.630 CDS CP003496.2 669373 669167 -1 - 207 Tfp pilus assembly protein, pilus retraction ATPase PilT - none -
fig|6666666.229908.peg.631 CDS CP003496.2 669710 669585 -2 - 126 hypothetical protein - none -
fig|6666666.229908.peg.632 CDS CP003496.2 669700 669891 1 + 192 Mobile element protein - none -
fig|6666666.229908.peg.633 CDS CP003496.2 670602 670039 -3 - 564 hypothetical protein - none -
fig|6666666.229908.peg.634 CDS CP003496.2 671214 670633 -3 - 582 hypothetical protein - none -
fig|6666666.229908.peg.635 CDS CP003496.2 673350 671218 -3 - 2133 hypothetical protein - none -
fig|6666666.229908.peg.636 CDS CP003496.2 675586 674174 -1 - 1413 hypothetical protein - none -
fig|6666666.229908.peg.637 CDS CP003496.2 675903 676028 3 + 126 Mobile element protein - none -
fig|6666666.229908.peg.638 CDS CP003496.2 676030 676230 1 + 201 Mobile element protein - none -
fig|6666666.229908.peg.639 CDS CP003496.2 676485 676634 3 + 150 hypothetical protein - none -
fig|6666666.229908.peg.640 CDS CP003496.2 677011 677169 1 + 159 hypothetical protein - none -
fig|6666666.229908.peg.641 CDS CP003496.2 678125 677325 -2 - 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229908.peg.642 CDS CP003496.2 678276 679016 3 + 741 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229908.peg.643 CDS CP003496.2 679078 679551 1 + 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229908.peg.644 CDS CP003496.2 679605 680819 3 + 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229908.peg.645 CDS CP003496.2 680879 681262 2 + 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229908.peg.646 CDS CP003496.2 681394 681717 1 + 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229908.peg.647 CDS CP003496.2 681729 682250 3 + 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229908.peg.648 CDS CP003496.2 682271 684130 2 + 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229908.peg.649 CDS CP003496.2 684142 684483 1 + 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229908.peg.650 CDS CP003496.2 684483 684677 3 + 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229908.peg.651 CDS CP003496.2 686871 684811 -3 - 2061 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229908.peg.652 CDS CP003496.2 687044 688156 2 + 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229908.peg.653 CDS CP003496.2 688437 688607 3 + 171 hypothetical protein - none -
fig|6666666.229908.peg.654 CDS CP003496.2 688604 690697 2 + 2094 VgrG-3 protein - none -
fig|6666666.229908.peg.655 CDS CP003496.2 690682 691584 1 + 903 hypothetical protein - none -
fig|6666666.229908.peg.656 CDS CP003496.2 692007 693221 3 + 1215 Probable phospholipase protein - none -
fig|6666666.229908.peg.657 CDS CP003496.2 693257 693979 2 + 723 miscellaneous; hypothetical/partial homology - none -
fig|6666666.229908.peg.658 CDS CP003496.2 694186 694371 1 + 186 hypothetical protein - none -
fig|6666666.229908.peg.659 CDS CP003496.2 694681 695079 1 + 399 hypothetical protein - none -
fig|6666666.229908.peg.660 CDS CP003496.2 695832 695305 -3 - 528 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229908.peg.661 CDS CP003496.2 697008 696157 -3 - 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229908.peg.662 CDS CP003496.2 697802 697005 -2 - 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229908.peg.663 CDS CP003496.2 698608 697811 -1 - 798 Protein of unknown function DUF81 - none -
fig|6666666.229908.peg.664 CDS CP003496.2 699210 698611 -3 - 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229908.peg.665 CDS CP003496.2 699430 699849 1 + 420 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229908.peg.666 CDS CP003496.2 699860 701368 2 + 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229908.peg.667 CDS CP003496.2 701365 702330 1 + 966 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229908.peg.668 CDS CP003496.2 702352 703224 1 + 873 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229908.peg.669 CDS CP003496.2 703306 704238 1 + 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229908.peg.670 CDS CP003496.2 704546 704337 -2 - 210 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.229908.peg.671 CDS CP003496.2 706437 704992 -3 - 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229908.peg.672 CDS CP003496.2 707127 707915 3 + 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229908.peg.673 CDS CP003496.2 708028 709404 1 + 1377 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229908.peg.674 CDS CP003496.2 709706 711055 2 + 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229908.peg.675 CDS CP003496.2 711545 712999 2 + 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229908.peg.676 CDS CP003496.2 713276 714601 2 + 1326 hypothetical protein - none -
fig|6666666.229908.peg.677 CDS CP003496.2 714594 716828 3 + 2235 hypothetical protein - none -
fig|6666666.229908.peg.678 CDS CP003496.2 716807 717991 2 + 1185 hypothetical protein - none -
fig|6666666.229908.peg.679 CDS CP003496.2 721542 718066 -3 - 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229908.peg.680 CDS CP003496.2 721507 721686 1 + 180 hypothetical protein - none -
fig|6666666.229908.peg.681 CDS CP003496.2 721741 723528 1 + 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229908.peg.682 CDS CP003496.2 724322 728911 2 + 4590 Autotransporter adhesin - none -
fig|6666666.229908.peg.683 CDS CP003496.2 729164 731290 2 + 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229908.peg.684 CDS CP003496.2 731471 731590 2 + 120 hypothetical protein - none -
fig|6666666.229908.peg.685 CDS CP003496.2 731858 731733 -2 - 126 hypothetical protein - none -
fig|6666666.229908.peg.686 CDS CP003496.2 731892 732359 3 + 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229908.peg.687 CDS CP003496.2 733174 732386 -1 - 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229908.peg.688 CDS CP003496.2 733458 733177 -3 - 282 hypothetical protein - none -
fig|6666666.229908.peg.689 CDS CP003496.2 733606 733451 -1 - 156 hypothetical protein - none -
fig|6666666.229908.peg.690 CDS CP003496.2 734212 733700 -1 - 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229908.peg.691 CDS CP003496.2 734282 735691 2 + 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229908.peg.692 CDS CP003496.2 736580 736023 -2 - 558 hypothetical protein - none -
fig|6666666.229908.peg.693 CDS CP003496.2 739519 737024 -1 - 2496 hypothetical protein - none -
fig|6666666.229908.peg.694 CDS CP003496.2 739807 739658 -1 - 150 hypothetical protein - none -
fig|6666666.229908.peg.695 CDS CP003496.2 740223 739897 -3 - 327 hypothetical protein - none -
fig|6666666.229908.peg.696 CDS CP003496.2 741308 740244 -2 - 1065 hypothetical protein - none -
fig|6666666.229908.peg.698 CDS CP003496.2 747733 747221 -1 - 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis;
Transport system clustering with HemG
fig|6666666.229908.peg.699 CDS CP003496.2 749196 747733 -3 - 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229908.peg.700 CDS CP003496.2 749430 749215 -3 - 216 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229908.peg.701 CDS CP003496.2 749580 749461 -3 - 120 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229908.peg.702 CDS CP003496.2 749729 749574 -2 - 156 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229908.peg.703 CDS CP003496.2 749854 749726 -1 - 129 hypothetical protein - none -
fig|6666666.229908.peg.704 CDS CP003496.2 749931 750056 3 + 126 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229908.peg.705 CDS CP003496.2 750085 750333 1 + 249 FIG01200701: hypothetical protein - none -
fig|6666666.229908.peg.706 CDS CP003496.2 750384 751655 3 + 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229908.peg.707 CDS CP003496.2 751671 752354 3 + 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229908.peg.708 CDS CP003496.2 752361 752474 3 + 114 hypothetical protein - none -
fig|6666666.229908.peg.709 CDS CP003496.2 752484 753704 3 + 1221 Tyrosine-specific transport protein - none -
fig|6666666.229908.peg.710 CDS CP003496.2 754389 754000 -3 - 390 LSU ribosomal protein L17p - none -
fig|6666666.229908.peg.711 CDS CP003496.2 755420 754431 -2 - 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229908.peg.712 CDS CP003496.2 756069 755449 -3 - 621 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229908.peg.713 CDS CP003496.2 756488 756099 -2 - 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229908.peg.714 CDS CP003496.2 756860 756504 -2 - 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229908.peg.715 CDS CP003496.2 757111 756998 -1 - 114 LSU ribosomal protein L36p - none -
fig|6666666.229908.peg.716 CDS CP003496.2 758463 757138 -3 - 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229908.peg.717 CDS CP003496.2 758901 758467 -3 - 435 LSU ribosomal protein L15p (L27Ae) - none -
fig|6666666.229908.peg.718 CDS CP003496.2 759591 759091 -3 - 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229908.peg.719 CDS CP003496.2 759885 759607 -3 - 279 LSU ribosomal protein L18p (L5e) - none -
fig|6666666.229908.peg.720 CDS CP003496.2 760507 759974 -1 - 534 LSU ribosomal protein L6p (L9e) - none -
fig|6666666.229908.peg.721 CDS CP003496.2 760915 760523 -1 - 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229908.peg.722 CDS CP003496.2 761257 760952 -1 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229908.peg.723 CDS CP003496.2 761698 761270 -1 - 429 LSU ribosomal protein L5p (L11e) - none -
fig|6666666.229908.peg.724 CDS CP003496.2 762138 761827 -3 - 312 LSU ribosomal protein L24p (L26e) - none -
fig|6666666.229908.peg.725 CDS CP003496.2 764157 763135 -3 - 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229908.peg.726 CDS CP003496.2 764942 764178 -2 - 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229908.peg.727 CDS CP003496.2 765642 764980 -3 - 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229908.peg.728 CDS CP003496.2 765870 765646 -3 - 225 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229908.peg.729 CDS CP003496.2 766148 766017 -2 - 132 hypothetical protein - none -
fig|6666666.229908.peg.730 CDS CP003496.2 766594 766418 -1 - 177 hypothetical protein - none -
fig|6666666.229908.peg.731 CDS CP003496.2 767613 766603 -3 - 1011 hypothetical protein - none -
fig|6666666.229908.peg.732 CDS CP003496.2 769607 767616 -2 - 1992 hypothetical protein - none -
fig|6666666.229908.peg.733 CDS CP003496.2 770577 769759 -3 - 819 hypothetical protein - none -
fig|6666666.229908.peg.734 CDS CP003496.2 771091 770921 -1 - 171 hypothetical protein - none -
fig|6666666.229908.peg.735 CDS CP003496.2 772172 771297 -2 - 876 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229908.peg.736 CDS CP003496.2 772656 772240 -3 - 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229908.peg.737 CDS CP003496.2 773328 772669 -3 - 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229908.peg.738 CDS CP003496.2 773367 773957 3 + 591 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229908.peg.739 CDS CP003496.2 774843 773962 -3 - 882 Transcriptional regulator, AraC family - none -
fig|6666666.229908.peg.740 CDS CP003496.2 775539 774913 -3 - 627 membrane protein ykgB - none -
fig|6666666.229908.peg.741 CDS CP003496.2 775908 777914 3 + 2007 oligopeptide transporter - none -
fig|6666666.229908.peg.742 CDS CP003496.2 777976 778404 1 + 429 hypothetical protein - none -
fig|6666666.229908.peg.743 CDS CP003496.2 778442 779251 2 + 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229908.peg.744 CDS CP003496.2 779274 780833 3 + 1560 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229908.peg.745 CDS CP003496.2 781086 781784 3 + 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229908.peg.746 CDS CP003496.2 781797 782255 3 + 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229908.peg.747 CDS CP003496.2 782790 782644 -3 - 147 hypothetical protein - none -
fig|6666666.229908.peg.748 CDS CP003496.2 782811 784265 3 + 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229908.peg.749 CDS CP003496.2 784742 784611 -2 - 132 hypothetical protein - none -
fig|6666666.229908.peg.750 CDS CP003496.2 785171 785052 -2 - 120 hypothetical protein - none -
fig|6666666.229908.peg.751 CDS CP003496.2 785173 786120 1 + 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229908.peg.752 CDS CP003496.2 786136 786696 1 + 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229908.peg.753 CDS CP003496.2 786721 787014 1 + 294 COG1872 - none -
fig|6666666.229908.peg.754 CDS CP003496.2 787131 787790 3 + 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229908.peg.755 CDS CP003496.2 788033 788557 2 + 525 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229908.peg.756 CDS CP003496.2 788600 789829 2 + 1230 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229908.peg.757 CDS CP003496.2 790275 790132 -3 - 144 hypothetical protein - none -
fig|6666666.229908.peg.758 CDS CP003496.2 791195 791046 -2 - 150 hypothetical protein - none -
fig|6666666.229908.peg.759 CDS CP003496.2 792301 791564 -1 - 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229908.peg.760 CDS CP003496.2 793277 792303 -2 - 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229908.peg.761 CDS CP003496.2 793384 794172 1 + 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229908.peg.762 CDS CP003496.2 794785 794210 -1 - 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229908.peg.763 CDS CP003496.2 795384 795079 -3 - 306 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229908.peg.764 CDS CP003496.2 795378 796112 3 + 735 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229908.peg.765 CDS CP003496.2 796142 797428 2 + 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229908.peg.766 CDS CP003496.2 797737 797582 -1 - 156 hypothetical protein - none -
fig|6666666.229908.peg.767 CDS CP003496.2 797923 798171 1 + 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229908.peg.768 CDS CP003496.2 798197 798724 2 + 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229908.peg.769 CDS CP003496.2 798790 799539 1 + 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229908.peg.770 CDS CP003496.2 799565 799915 2 + 351 LSU ribosomal protein L19p - none -
fig|6666666.229908.peg.771 CDS CP003496.2 800513 800025 -2 - 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229908.peg.772 CDS CP003496.2 801586 800513 -1 - 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229908.peg.773 CDS CP003496.2 802711 801656 -1 - 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229908.peg.774 CDS CP003496.2 802961 805366 2 + 2406 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229908.peg.775 CDS CP003496.2 805363 806100 1 + 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229908.peg.776 CDS CP003496.2 806433 807875 3 + 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229908.peg.777 CDS CP003496.2 808107 809189 3 + 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229908.peg.778 CDS CP003496.2 810363 809245 -3 - 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
YrdC-YciO-Sua5 protein family
fig|6666666.229908.peg.779 CDS CP003496.2 810591 810394 -3 - 198 hypothetical protein - none -
fig|6666666.229908.peg.780 CDS CP003496.2 811030 810581 -1 - 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229908.peg.781 CDS CP003496.2 811276 811046 -1 - 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229908.peg.782 CDS CP003496.2 811615 811289 -1 - 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229908.peg.783 CDS CP003496.2 811979 811602 -2 - 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229908.peg.784 CDS CP003496.2 812754 812131 -3 - 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229908.peg.785 CDS CP003496.2 812962 815400 1 + 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.786 CDS CP003496.2 817285 815441 -1 - 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229908.peg.787 CDS CP003496.2 818290 817373 -1 - 918 transcriptional regulator MtrA - none -
fig|6666666.229908.peg.788 CDS CP003496.2 818394 818735 3 + 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229908.peg.789 CDS CP003496.2 819875 818832 -2 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229908.peg.790 CDS CP003496.2 819964 820689 1 + 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229908.peg.791 CDS CP003496.2 821232 820738 -3 - 495 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229908.peg.792 CDS CP003496.2 822516 821233 -3 - 1284 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) KDO2-Lipid A biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229908.peg.793 CDS CP003496.2 822615 823376 3 + 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229908.peg.794 CDS CP003496.2 823730 823434 -2 - 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.795 CDS CP003496.2 824022 823747 -3 - 276 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.796 CDS CP003496.2 825506 824139 -2 - 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.797 CDS CP003496.2 825692 826768 2 + 1077 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229908.peg.798 CDS CP003496.2 827056 826835 -1 - 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229908.peg.799 CDS CP003496.2 827163 827858 3 + 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229908.peg.800 CDS CP003496.2 827975 829138 2 + 1164 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229908.peg.801 CDS CP003496.2 829203 830282 3 + 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229908.peg.802 CDS CP003496.2 830457 830284 -3 - 174 hypothetical protein - none -
fig|6666666.229908.peg.803 CDS CP003496.2 830491 831633 1 + 1143 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229908.peg.804 CDS CP003496.2 831626 832549 2 + 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229908.peg.805 CDS CP003496.2 833405 832587 -2 - 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229908.peg.806 CDS CP003496.2 833624 834421 2 + 798 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229908.peg.807 CDS CP003496.2 834373 834558 1 + 186 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229908.peg.808 CDS CP003496.2 834763 834647 -1 - 117 hypothetical protein - none -
fig|6666666.229908.peg.809 CDS CP003496.2 836205 835021 -3 - 1185 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229908.peg.810 CDS CP003496.2 836938 837852 1 + 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229908.peg.811 CDS CP003496.2 840243 837907 -3 - 2337 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229908.peg.812 CDS CP003496.2 842313 840424 -3 - 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229908.peg.813 CDS CP003496.2 842624 842310 -2 - 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229908.peg.814 CDS CP003496.2 842747 842866 2 + 120 hypothetical protein - none -
fig|6666666.229908.peg.815 CDS CP003496.2 842884 844134 1 + 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229908.peg.816 CDS CP003496.2 844792 844187 -1 - 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229908.peg.817 CDS CP003496.2 844993 845553 1 + 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229908.peg.818 CDS CP003496.2 845619 847961 3 + 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229908.peg.819 CDS CP003496.2 848590 848051 -1 - 540 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229908.peg.820 CDS CP003496.2 848630 850090 2 + 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229908.peg.821 CDS CP003496.2 850925 850170 -2 - 756 Short chain dehydrogenase - none -
fig|6666666.229908.peg.822 CDS CP003496.2 851530 850979 -1 - 552 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229908.peg.823 CDS CP003496.2 852048 851611 -3 - 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229908.peg.824 CDS CP003496.2 853014 852058 -3 - 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229908.peg.825 CDS CP003496.2 853681 853097 -1 - 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229908.peg.826 CDS CP003496.2 854300 853725 -2 - 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229908.peg.827 CDS CP003496.2 854687 854433 -2 - 255 YgfY COG2938 - none -
fig|6666666.229908.peg.828 CDS CP003496.2 855056 854727 -2 - 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229908.peg.829 CDS CP003496.2 856838 855123 -2 - 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229908.peg.830 CDS CP003496.2 856988 858382 2 + 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229908.peg.831 CDS CP003496.2 858379 860238 1 + 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229908.peg.832 CDS CP003496.2 860284 861186 1 + 903 hypothetical protein - none -
fig|6666666.229908.peg.833 CDS CP003496.2 861261 862391 3 + 1131 hypothetical protein - none -
fig|6666666.229908.peg.834 CDS CP003496.2 862428 863798 3 + 1371 hypothetical protein - none -
fig|6666666.229908.peg.835 CDS CP003496.2 863795 864439 2 + 645 hypothetical protein - none -
fig|6666666.229908.peg.836 CDS CP003496.2 864631 864762 1 + 132 hypothetical protein - none -
fig|6666666.229908.peg.837 CDS CP003496.2 865041 867002 3 + 1962 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229908.peg.838 CDS CP003496.2 866963 867634 2 + 672 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229908.peg.839 CDS CP003496.2 867751 868569 1 + 819 hypothetical protein - none -
fig|6666666.229908.peg.840 CDS CP003496.2 868686 869168 3 + 483 hypothetical protein - none -
fig|6666666.229908.peg.841 CDS CP003496.2 869666 872017 2 + 2352 hypothetical protein - none -
fig|6666666.229908.peg.842 CDS CP003496.2 872027 873034 2 + 1008 hypothetical protein - none -
fig|6666666.229908.peg.843 CDS CP003496.2 873098 873325 2 + 228 hypothetical protein - none -
fig|6666666.229908.peg.844 CDS CP003496.2 874188 873607 -3 - 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229908.peg.845 CDS CP003496.2 875207 874278 -2 - 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.846 CDS CP003496.2 875839 875207 -1 - 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.847 CDS CP003496.2 876458 875850 -2 - 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.848 CDS CP003496.2 878337 876469 -3 - 1869 Putative transport protein - none -
fig|6666666.229908.peg.849 CDS CP003496.2 878976 878377 -3 - 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229908.peg.850 CDS CP003496.2 880153 878969 -1 - 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229908.peg.851 CDS CP003496.2 881026 880238 -1 - 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229908.peg.852 CDS CP003496.2 881457 881047 -3 - 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229908.peg.853 CDS CP003496.2 882616 881594 -1 - 1023 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229908.peg.854 CDS CP003496.2 883191 882616 -3 - 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229908.peg.855 CDS CP003496.2 885707 883296 -2 - 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229908.peg.856 CDS CP003496.2 887060 885726 -2 - 1335 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage CBSS-83331.1.peg.3039;
Periplasmic Stress Response
fig|6666666.229908.peg.857 CDS CP003496.2 887938 887069 -1 - 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.858 CDS CP003496.2 888672 887953 -3 - 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229908.peg.859 CDS CP003496.2 889977 888694 -3 - 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229908.peg.860 CDS CP003496.2 890563 890006 -1 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229908.peg.861 CDS CP003496.2 890720 890577 -2 - 144 hypothetical protein - none -
fig|6666666.229908.peg.862 CDS CP003496.2 891501 890788 -3 - 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229908.peg.863 CDS CP003496.2 891646 891533 -1 - 114 hypothetical protein - none -
fig|6666666.229908.peg.864 CDS CP003496.2 893316 891658 -3 - 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229908.peg.865 CDS CP003496.2 893440 895257 1 + 1818 ABC transporter ATP-binding protein - none -
fig|6666666.229908.peg.866 CDS CP003496.2 896119 895847 -1 - 273 Probable tonB-dependent receptor HI1217 precursor - none -
fig|6666666.229908.peg.867 CDS CP003496.2 898597 896141 -1 - 2457 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229908.peg.868 CDS CP003496.2 899687 898932 -2 - 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229908.peg.869 CDS CP003496.2 900624 899749 -3 - 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229908.peg.870 CDS CP003496.2 900667 900981 1 + 315 Uncharacterized protein PM1437 - none -
fig|6666666.229908.peg.871 CDS CP003496.2 901319 900993 -2 - 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229908.peg.872 CDS CP003496.2 901984 901331 -1 - 654 FIG00903983: hypothetical protein - none -
fig|6666666.229908.peg.873 CDS CP003496.2 903759 902005 -3 - 1755 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229908.peg.874 CDS CP003496.2 903762 904301 3 + 540 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229908.peg.875 CDS CP003496.2 904306 904857 1 + 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229908.peg.876 CDS CP003496.2 904861 905661 1 + 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229908.peg.877 CDS CP003496.2 906537 905656 -3 - 882 Protein rarD - none -
fig|6666666.229908.peg.878 CDS CP003496.2 906755 906570 -2 - 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229908.peg.879 CDS CP003496.2 907396 907695 1 + 300 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229908.peg.880 CDS CP003496.2 907859 907975 2 + 117 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229908.peg.881 CDS CP003496.2 908154 908291 3 + 138 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229908.peg.882 CDS CP003496.2 908444 908914 2 + 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229908.peg.883 CDS CP003496.2 909029 911131 2 + 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229908.peg.884 CDS CP003496.2 911195 912379 2 + 1185 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229908.peg.885 CDS CP003496.2 913390 912449 -1 - 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229908.peg.886 CDS CP003496.2 913553 915040 2 + 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229908.peg.887 CDS CP003496.2 915056 916084 2 + 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229908.peg.888 CDS CP003496.2 916090 917547 1 + 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229908.peg.889 CDS CP003496.2 919910 917595 -2 - 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229908.peg.890 CDS CP003496.2 920163 920297 3 + 135 hypothetical protein - none -
fig|6666666.229908.peg.891 CDS CP003496.2 920365 920538 1 + 174 hypothetical protein - none -
fig|6666666.229908.peg.892 CDS CP003496.2 920691 920837 3 + 147 Mobile element protein - none -
fig|6666666.229908.peg.893 CDS CP003496.2 920831 921340 2 + 510 Mobile element protein - none -
fig|6666666.229908.peg.894 CDS CP003496.2 922276 921389 -1 - 888 RuBisCO operon transcriptional regulator CO2 uptake, carboxysome
fig|6666666.229908.peg.895 CDS CP003496.2 922386 923855 3 + 1470 Sodium-dependent transporter - none -
fig|6666666.229908.peg.896 CDS CP003496.2 923867 924466 2 + 600 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229908.peg.897 CDS CP003496.2 924652 924816 1 + 165 hypothetical protein - none -
fig|6666666.229908.peg.898 CDS CP003496.2 925052 924861 -2 - 192 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229908.peg.899 CDS CP003496.2 925203 925685 3 + 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229908.peg.900 CDS CP003496.2 925959 925768 -3 - 192 hypothetical protein - none -
fig|6666666.229908.peg.901 CDS CP003496.2 926561 925974 -2 - 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229908.peg.902 CDS CP003496.2 927028 926747 -1 - 282 hypothetical protein - none -
fig|6666666.229908.peg.903 CDS CP003496.2 927290 928027 2 + 738 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229908.peg.904 CDS CP003496.2 929346 928096 -3 - 1251 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229908.peg.905 CDS CP003496.2 930744 929359 -3 - 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229908.peg.906 CDS CP003496.2 931521 930775 -3 - 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229908.peg.907 CDS CP003496.2 932461 931535 -1 - 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229908.peg.908 CDS CP003496.2 932617 935118 1 + 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229908.peg.909 CDS CP003496.2 935128 935757 1 + 630 Nitrate/nitrite response regulator protein Nitrate and nitrite ammonification
fig|6666666.229908.peg.910 CDS CP003496.2 935825 937684 2 + 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229908.peg.911 CDS CP003496.2 937712 941593 2 + 3882 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229908.peg.912 CDS CP003496.2 941596 943143 1 + 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229908.peg.913 CDS CP003496.2 944824 943208 -1 - 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.229908.peg.914 CDS CP003496.2 945083 945727 2 + 645 converved hypothetical protein - none -
fig|6666666.229908.peg.915 CDS CP003496.2 945776 946495 2 + 720 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229908.peg.916 CDS CP003496.2 946664 947728 2 + 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229908.peg.917 CDS CP003496.2 947746 948336 1 + 591 FIG01200173: hypothetical protein - none -
fig|6666666.229908.peg.918 CDS CP003496.2 948503 948775 2 + 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229908.peg.919 CDS CP003496.2 948901 949698 1 + 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229908.peg.920 CDS CP003496.2 949752 951584 3 + 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229908.peg.921 CDS CP003496.2 952800 951736 -3 - 1065 FIG01220323: hypothetical protein - none -
fig|6666666.229908.peg.922 CDS CP003496.2 952900 953790 1 + 891 Transcriptional regulator, LysR family - none -
fig|6666666.229908.peg.923 CDS CP003496.2 955038 953929 -3 - 1110 Putative exported protein precursor - none -
fig|6666666.229908.peg.924 CDS CP003496.2 956830 955175 -1 - 1656 Carboxylesterase type B - none -
fig|6666666.229908.peg.925 CDS CP003496.2 958036 957056 -1 - 981 Aldo-keto reductase - none -
fig|6666666.229908.peg.926 CDS CP003496.2 958945 958100 -1 - 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229908.peg.927 CDS CP003496.2 959128 960021 1 + 894 Transcriptional regulator, LysR family - none -
fig|6666666.229908.peg.928 CDS CP003496.2 960925 960110 -1 - 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229908.peg.929 CDS CP003496.2 962762 961263 -2 - 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229908.peg.930 CDS CP003496.2 962888 963556 2 + 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229908.peg.931 CDS CP003496.2 963559 964032 1 + 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229908.peg.932 CDS CP003496.2 964029 964859 3 + 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229908.peg.933 CDS CP003496.2 964856 965290 2 + 435 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229908.peg.934 CDS CP003496.2 965456 966664 2 + 1209 Sodium/glutamate symport protein - none -
fig|6666666.229908.peg.935 CDS CP003496.2 968108 966720 -2 - 1389 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229908.peg.936 CDS CP003496.2 968848 968153 -1 - 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229908.peg.937 CDS CP003496.2 969303 968890 -3 - 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229908.peg.938 CDS CP003496.2 970394 969369 -2 - 1026 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229908.peg.939 CDS CP003496.2 970487 970744 2 + 258 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229908.peg.940 CDS CP003496.2 970749 972488 3 + 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229908.peg.941 CDS CP003496.2 972762 972625 -3 - 138 hypothetical protein - none -
fig|6666666.229908.peg.942 CDS CP003496.2 972748 973737 1 + 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229908.peg.943 CDS CP003496.2 974692 973835 -1 - 858 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229908.peg.944 CDS CP003496.2 974811 975236 3 + 426 Universal stress protein A Universal stress protein family
fig|6666666.229908.peg.945 CDS CP003496.2 975436 978060 1 + 2625 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229908.peg.946 CDS CP003496.2 978183 978365 3 + 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229908.peg.947 CDS CP003496.2 978397 979761 1 + 1365 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229908.peg.948 CDS CP003496.2 979837 980724 1 + 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229908.peg.949 CDS CP003496.2 980879 981196 2 + 318 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229908.peg.950 CDS CP003496.2 981283 982017 1 + 735 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229908.peg.951 CDS CP003496.2 982035 982592 3 + 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229908.peg.952 CDS CP003496.2 982592 983011 2 + 420 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.229908.peg.953 CDS CP003496.2 984418 983108 -1 - 1311 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.229908.peg.954 CDS CP003496.2 984827 984687 -2 - 141 hypothetical protein - none -
fig|6666666.229908.peg.955 CDS CP003496.2 986209 985058 -1 - 1152 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229908.peg.956 CDS CP003496.2 986727 986470 -3 - 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.957 CDS CP003496.2 987894 986806 -3 - 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229908.peg.958 CDS CP003496.2 988040 987891 -2 - 150 hypothetical protein - none -
fig|6666666.229908.peg.959 CDS CP003496.2 989280 988045 -3 - 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.960 CDS CP003496.2 989888 989292 -2 - 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.961 CDS CP003496.2 990521 989892 -2 - 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.962 CDS CP003496.2 991306 990521 -1 - 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.963 CDS CP003496.2 992534 991299 -2 - 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.964 CDS CP003496.2 993877 992537 -1 - 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229908.peg.965 CDS CP003496.2 994069 993902 -1 - 168 hypothetical protein - none -
fig|6666666.229908.peg.966 CDS CP003496.2 994223 994107 -2 - 117 hypothetical protein - none -
fig|6666666.229908.peg.967 CDS CP003496.2 994544 994233 -2 - 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229908.peg.968 CDS CP003496.2 994648 995241 1 + 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229908.peg.969 CDS CP003496.2 995347 995222 -1 - 126 hypothetical protein - none -
fig|6666666.229908.peg.970 CDS CP003496.2 996821 995742 -2 - 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229908.peg.971 CDS CP003496.2 997102 996824 -1 - 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229908.peg.972 CDS CP003496.2 998339 997080 -2 - 1260 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229908.peg.973 CDS CP003496.2 998437 999204 1 + 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229908.peg.974 CDS CP003496.2 999234 999575 3 + 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229908.peg.975 CDS CP003496.2 999794 1000792 2 + 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229908.peg.976 CDS CP003496.2 1000873 1002393 1 + 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229908.peg.977 CDS CP003496.2 1002409 1003467 1 + 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229908.peg.978 CDS CP003496.2 1004456 1003488 -2 - 969 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229908.peg.979 CDS CP003496.2 1005335 1004460 -2 - 876 DnaJ-like protein DjlA - none -
fig|6666666.229908.peg.980 CDS CP003496.2 1006061 1005417 -2 - 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229908.peg.981 CDS CP003496.2 1006787 1006071 -2 - 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229908.peg.982 CDS CP003496.2 1006905 1007768 3 + 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229908.peg.983 CDS CP003496.2 1007796 1008683 3 + 888 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229908.peg.984 CDS CP003496.2 1008802 1009191 1 + 390 Patatin-like phospholipase - none -
fig|6666666.229908.peg.985 CDS CP003496.2 1009266 1009988 3 + 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229908.peg.986 CDS CP003496.2 1010037 1010150 3 + 114 hypothetical protein - none -
fig|6666666.229908.peg.987 CDS CP003496.2 1010143 1010991 1 + 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229908.peg.988 CDS CP003496.2 1011299 1011985 2 + 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229908.peg.989 CDS CP003496.2 1011987 1013303 3 + 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229908.peg.990 CDS CP003496.2 1013313 1015544 3 + 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229908.peg.991 CDS CP003496.2 1015570 1015926 1 + 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229908.peg.992 CDS CP003496.2 1015942 1016601 1 + 660 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229908.peg.993 CDS CP003496.2 1017420 1016620 -3 - 801 Orf2 - none -
fig|6666666.229908.peg.994 CDS CP003496.2 1017459 1017584 3 + 126 hypothetical protein - none -
fig|6666666.229908.peg.995 CDS CP003496.2 1020672 1017574 -3 - 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229908.peg.996 CDS CP003496.2 1021882 1020686 -1 - 1197 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229908.peg.997 CDS CP003496.2 1022474 1021908 -2 - 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229908.peg.998 CDS CP003496.2 1023508 1022675 -1 - 834 Cell division protein - none -
fig|6666666.229908.peg.999 CDS CP003496.2 1025816 1023618 -2 - 2199 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229908.peg.1000 CDS CP003496.2 1026043 1026906 1 + 864 Involved in lipopolysaccharide biosynthesis - none -
fig|6666666.229908.peg.1001 CDS CP003496.2 1027917 1026913 -3 - 1005 putative capsular polysaccharide synthesis protein - none -
fig|6666666.229908.peg.1002 CDS CP003496.2 1028774 1027926 -2 - 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229908.peg.1003 CDS CP003496.2 1029032 1029244 2 + 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent - none -
fig|6666666.229908.peg.1004 CDS CP003496.2 1029307 1029999 1 + 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229908.peg.1005 CDS CP003496.2 1030000 1031022 1 + 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229908.peg.1006 CDS CP003496.2 1031032 1032084 1 + 1053 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229908.peg.1007 CDS CP003496.2 1032944 1032087 -2 - 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229908.peg.1008 CDS CP003496.2 1033154 1032984 -2 - 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent - none -
fig|6666666.229908.peg.1009 CDS CP003496.2 1033339 1033166 -1 - 174 LSU ribosomal protein L28p - none -
fig|6666666.229908.peg.1010 CDS CP003496.2 1034248 1033589 -1 - 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229908.peg.1011 CDS CP003496.2 1034427 1034299 -3 - 129 hypothetical protein - none -
fig|6666666.229908.peg.1012 CDS CP003496.2 1034426 1034659 2 + 234 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229908.peg.1013 CDS CP003496.2 1034646 1035626 3 + 981 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229908.peg.1014 CDS CP003496.2 1035695 1036150 2 + 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229908.peg.1015 CDS CP003496.2 1036150 1036749 1 + 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229908.peg.1016 CDS CP003496.2 1036773 1036991 3 + 219 FIG00696234: hypothetical protein - none -
fig|6666666.229908.peg.1017 CDS CP003496.2 1037029 1037673 1 + 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229908.peg.1018 CDS CP003496.2 1039176 1037806 -3 - 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229908.peg.1019 CDS CP003496.2 1040116 1039271 -1 - 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229908.peg.1020 CDS CP003496.2 1042778 1040211 -2 - 2568 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229908.peg.1021 CDS CP003496.2 1042912 1043721 1 + 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229908.peg.1022 CDS CP003496.2 1043732 1044250 2 + 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229908.peg.1023 CDS CP003496.2 1044247 1044771 1 + 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229908.peg.1024 CDS CP003496.2 1044771 1045163 3 + 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229908.peg.1025 CDS CP003496.2 1045184 1046593 2 + 1410 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229908.peg.1026 CDS CP003496.2 1046807 1047334 2 + 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229908.peg.1027 CDS CP003496.2 1047358 1048446 1 + 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229908.peg.1028 CDS CP003496.2 1048449 1049303 3 + 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229908.peg.1029 CDS CP003496.2 1050069 1049542 -3 - 528 probable integral membrane protein NMA1777 - none -
fig|6666666.229908.peg.1030 CDS CP003496.2 1050422 1050120 -2 - 303 probable integral membrane protein NMA1777 - none -
fig|6666666.229908.peg.1031 CDS CP003496.2 1050865 1050422 -1 - 444 Transcriptional regulator, MarR family - none -
fig|6666666.229908.peg.1032 CDS CP003496.2 1051013 1052128 2 + 1116 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.229908.peg.1033 CDS CP003496.2 1052712 1052524 -3 - 189 hypothetical protein - none -
fig|6666666.229908.peg.1034 CDS CP003496.2 1052879 1055050 2 + 2172 Hypothetical SecA-related protein - none -
fig|6666666.229908.peg.1035 CDS CP003496.2 1055264 1055830 2 + 567 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229908.peg.1036 CDS CP003496.2 1056505 1056020 -1 - 486 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229908.peg.1037 CDS CP003496.2 1056675 1059506 3 + 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229908.peg.1038 CDS CP003496.2 1059583 1059717 1 + 135 hypothetical protein - none -
fig|6666666.229908.peg.1039 CDS CP003496.2 1059785 1059958 2 + 174 hypothetical protein - none -
fig|6666666.229908.peg.1040 CDS CP003496.2 1060111 1060257 1 + 147 Mobile element protein - none -
fig|6666666.229908.peg.1041 CDS CP003496.2 1060251 1060760 3 + 510 Mobile element protein - none -
fig|6666666.229908.peg.1042 CDS CP003496.2 1061340 1060837 -3 - 504 Mercuric resistance operon regulatory protein - none -
fig|6666666.229908.peg.1043 CDS CP003496.2 1061679 1061368 -3 - 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229908.peg.1044 CDS CP003496.2 1061771 1062088 2 + 318 hypothetical protein - none -
fig|6666666.229908.peg.1045 CDS CP003496.2 1062098 1064860 2 + 2763 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229908.peg.1046 CDS CP003496.2 1064937 1065341 3 + 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229908.peg.1047 CDS CP003496.2 1066867 1065833 -1 - 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229908.peg.1048 CDS CP003496.2 1067370 1066867 -3 - 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229908.peg.1049 CDS CP003496.2 1067359 1067487 1 + 129 hypothetical protein - none -
fig|6666666.229908.peg.1050 CDS CP003496.2 1070100 1067512 -3 - 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229908.peg.1051 CDS CP003496.2 1070248 1070078 -1 - 171 hypothetical protein - none -
fig|6666666.229908.peg.1052 CDS CP003496.2 1070336 1070220 -2 - 117 hypothetical protein - none -
fig|6666666.229908.peg.1053 CDS CP003496.2 1070848 1070291 -1 - 558 FIG00696423: hypothetical protein - none -
fig|6666666.229908.peg.1054 CDS CP003496.2 1071169 1070876 -1 - 294 nucleotidyltransferase - none -
fig|6666666.229908.peg.1055 CDS CP003496.2 1071572 1071153 -2 - 420 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229908.peg.1056 CDS CP003496.2 1072490 1071663 -2 - 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229908.peg.1057 CDS CP003496.2 1073369 1072506 -2 - 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229908.peg.1058 CDS CP003496.2 1074379 1073447 -1 - 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229908.peg.1059 CDS CP003496.2 1074982 1074446 -1 - 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229908.peg.1060 CDS CP003496.2 1075531 1075121 -1 - 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229908.peg.1061 CDS CP003496.2 1075644 1076255 3 + 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229908.peg.1062 CDS CP003496.2 1076279 1077646 2 + 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229908.peg.1063 CDS CP003496.2 1077868 1078617 1 + 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229908.peg.1064 CDS CP003496.2 1079138 1078731 -2 - 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229908.peg.1065 CDS CP003496.2 1079276 1080400 2 + 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229908.peg.1066 CDS CP003496.2 1080413 1081243 2 + 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229908.peg.1067 CDS CP003496.2 1081596 1081715 3 + 120 hypothetical protein - none -
fig|6666666.229908.peg.1068 CDS CP003496.2 1083263 1081884 -2 - 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229908.peg.1069 CDS CP003496.2 1083417 1084211 3 + 795 FIG001154: CcsA-related protein - none -
fig|6666666.229908.peg.1070 CDS CP003496.2 1084286 1085548 2 + 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229908.peg.1071 CDS CP003496.2 1085723 1086193 2 + 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229908.peg.1072 CDS CP003496.2 1086197 1086643 2 + 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229908.peg.1073 CDS CP003496.2 1086653 1087411 2 + 759 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229908.peg.1074 CDS CP003496.2 1088272 1087499 -1 - 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229908.peg.1075 CDS CP003496.2 1088875 1088348 -1 - 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229908.peg.1076 CDS CP003496.2 1089037 1090281 1 + 1245 Tryptophan-specific transport protein - none -
fig|6666666.229908.peg.1077 CDS CP003496.2 1090305 1090622 3 + 318 hypothetical protein - none -
fig|6666666.229908.peg.1078 CDS CP003496.2 1090606 1090875 1 + 270 hypothetical protein - none -
fig|6666666.229908.peg.1079 CDS CP003496.2 1091964 1091257 -3 - 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229908.peg.1080 CDS CP003496.2 1092179 1092706 2 + 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229908.peg.1081 CDS CP003496.2 1092727 1094058 1 + 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229908.peg.1082 CDS CP003496.2 1094124 1095707 3 + 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229908.peg.1083 CDS CP003496.2 1095773 1096549 2 + 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229908.peg.1084 CDS CP003496.2 1096567 1097061 1 + 495 Protein yfbU - none -
fig|6666666.229908.peg.1085 CDS CP003496.2 1097136 1097023 -3 - 114 hypothetical protein - none -
fig|6666666.229908.peg.1086 CDS CP003496.2 1097506 1097676 1 + 171 hypothetical protein - none -
fig|6666666.229908.peg.1087 CDS CP003496.2 1097673 1099895 3 + 2223 VgrG-3 protein - none -
fig|6666666.229908.peg.1088 CDS CP003496.2 1099899 1100942 3 + 1044 Probable phospholipase protein - none -
fig|6666666.229908.peg.1089 CDS CP003496.2 1101191 1102102 2 + 912 Probable phospholipase protein - none -
fig|6666666.229908.peg.1090 CDS CP003496.2 1102198 1103256 1 + 1059 hypothetical protein - none -
fig|6666666.229908.peg.1091 CDS CP003496.2 1103568 1103699 3 + 132 hypothetical protein - none -
fig|6666666.229908.peg.1092 CDS CP003496.2 1104535 1104050 -1 - 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229908.peg.1093 CDS CP003496.2 1105039 1104575 -1 - 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229908.peg.1094 CDS CP003496.2 1105826 1105041 -2 - 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229908.peg.1095 CDS CP003496.2 1105977 1106156 3 + 180 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229908.peg.1096 CDS CP003496.2 1106137 1106796 1 + 660 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229908.peg.1097 CDS CP003496.2 1107493 1106861 -1 - 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229908.peg.1098 CDS CP003496.2 1108388 1107519 -2 - 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.1099 CDS CP003496.2 1108611 1109900 3 + 1290 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229908.peg.1100 CDS CP003496.2 1109893 1111068 1 + 1176 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229908.peg.1101 CDS CP003496.2 1111049 1111699 2 + 651 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229908.peg.1102 CDS CP003496.2 1111717 1112457 1 + 741 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229908.peg.1103 CDS CP003496.2 1112457 1113098 3 + 642 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229908.peg.1104 CDS CP003496.2 1113170 1113694 2 + 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229908.peg.1105 CDS CP003496.2 1113711 1113881 3 + 171 LSU ribosomal protein L32p - none -
fig|6666666.229908.peg.1106 CDS CP003496.2 1113908 1114927 2 + 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.1107 CDS CP003496.2 1114974 1115924 3 + 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229908.peg.1108 CDS CP003496.2 1116031 1116969 1 + 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229908.peg.1109 CDS CP003496.2 1116994 1117722 1 + 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229908.peg.1110 CDS CP003496.2 1117995 1118225 3 + 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.1111 CDS CP003496.2 1118374 1118234 -1 - 141 hypothetical protein - none -
fig|6666666.229908.peg.1112 CDS CP003496.2 1118454 1119689 3 + 1236 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229908.peg.1113 CDS CP003496.2 1121052 1119814 -3 - 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229908.peg.1114 CDS CP003496.2 1121377 1122633 1 + 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229908.peg.1115 CDS CP003496.2 1122700 1123008 1 + 309 Iojap protein - none -
fig|6666666.229908.peg.1116 CDS CP003496.2 1122999 1123535 3 + 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229908.peg.1117 CDS CP003496.2 1123548 1125509 3 + 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229908.peg.1118 CDS CP003496.2 1125496 1126617 1 + 1122 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229908.peg.1119 CDS CP003496.2 1126666 1127523 1 + 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229908.peg.1120 CDS CP003496.2 1127554 1128744 1 + 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229908.peg.1121 CDS CP003496.2 1128794 1129093 2 + 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229908.peg.1122 CDS CP003496.2 1129139 1129777 2 + 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229908.peg.1123 CDS CP003496.2 1129842 1130804 3 + 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229908.peg.1124 CDS CP003496.2 1131231 1131013 -3 - 219 hypothetical protein - none -
fig|6666666.229908.peg.1125 CDS CP003496.2 1131425 1131547 2 + 123 hypothetical protein - none -
fig|6666666.229908.peg.1126 CDS CP003496.2 1131594 1132958 3 + 1365 lipoprotein, putative - none -
fig|6666666.229908.peg.1127 CDS CP003496.2 1132993 1133115 1 + 123 hypothetical protein - none -
fig|6666666.229908.peg.1128 CDS CP003496.2 1133084 1134379 2 + 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229908.peg.1129 CDS CP003496.2 1134505 1135284 1 + 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229908.peg.1130 CDS CP003496.2 1135307 1135990 2 + 684 L-Cystine ABC transporter, permease protein TcyB - none -
fig|6666666.229908.peg.1131 CDS CP003496.2 1136000 1136767 2 + 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229908.peg.1132 CDS CP003496.2 1137062 1136772 -2 - 291 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229908.peg.1133 CDS CP003496.2 1137424 1137062 -1 - 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229908.peg.1134 CDS CP003496.2 1137798 1137421 -3 - 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229908.peg.1135 CDS CP003496.2 1138470 1137802 -3 - 669 YheO-like PAS domain - none -
fig|6666666.229908.peg.1136 CDS CP003496.2 1139275 1138550 -1 - 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229908.peg.1137 CDS CP003496.2 1139370 1139585 3 + 216 Protein SlyX - none -
fig|6666666.229908.peg.1138 CDS CP003496.2 1140374 1139646 -2 - 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229908.peg.1139 CDS CP003496.2 1140533 1141432 2 + 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229908.peg.1140 CDS CP003496.2 1141444 1142064 1 + 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229908.peg.1141 CDS CP003496.2 1143809 1142175 -2 - 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229908.peg.1142 CDS CP003496.2 1145574 1143826 -3 - 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229908.peg.1143 CDS CP003496.2 1147066 1145744 -1 - 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229908.peg.1144 CDS CP003496.2 1147327 1147833 1 + 507 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229908.peg.1145 CDS CP003496.2 1147849 1148361 1 + 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229908.peg.1146 CDS CP003496.2 1148439 1149452 3 + 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.1147 CDS CP003496.2 1149455 1150252 2 + 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229908.peg.1148 CDS CP003496.2 1150431 1150300 -3 - 132 hypothetical protein - none -
fig|6666666.229908.peg.1149 CDS CP003496.2 1150452 1150856 3 + 405 hypothetical protein - none -
fig|6666666.229908.peg.1150 CDS CP003496.2 1151907 1150894 -3 - 1014 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229908.peg.1151 CDS CP003496.2 1152103 1152321 1 + 219 FIG074102: hypothetical protein - none -
fig|6666666.229908.peg.1152 CDS CP003496.2 1152378 1152821 3 + 444 Flavoprotein MioC Flavodoxin
fig|6666666.229908.peg.1153 CDS CP003496.2 1153250 1155139 2 + 1890 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229908.peg.1154 CDS CP003496.2 1155257 1155141 -2 - 117 hypothetical protein - none -
fig|6666666.229908.peg.1155 CDS CP003496.2 1156112 1155411 -2 - 702 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229908.peg.1156 CDS CP003496.2 1156267 1156097 -1 - 171 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229908.peg.1157 CDS CP003496.2 1156311 1156781 3 + 471 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229908.peg.1158 CDS CP003496.2 1156774 1157457 1 + 684 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229908.peg.1159 CDS CP003496.2 1157569 1157946 1 + 378 FIG048548: ATP synthase protein I2 F0F1-type ATP synthase
fig|6666666.229908.peg.1160 CDS CP003496.2 1157971 1158759 1 + 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229908.peg.1161 CDS CP003496.2 1158811 1159065 1 + 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229908.peg.1162 CDS CP003496.2 1159178 1159585 2 + 408 ATP synthase F0 sector subunit b (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229908.peg.1163 CDS CP003496.2 1159599 1160147 3 + 549 ATP synthase delta chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229908.peg.1164 CDS CP003496.2 1160160 1161701 3 + 1542 ATP synthase alpha chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229908.peg.1165 CDS CP003496.2 1161717 1162586 3 + 870 ATP synthase gamma chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229908.peg.1166 CDS CP003496.2 1162603 1163976 1 + 1374 ATP synthase beta chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229908.peg.1167 CDS CP003496.2 1164018 1164446 3 + 429 ATP synthase epsilon chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229908.peg.1168 CDS CP003496.2 1165553 1164507 -2 - 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229908.peg.1169 CDS CP003496.2 1166632 1165718 -1 - 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229908.peg.1170 CDS CP003496.2 1167759 1166629 -3 - 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229908.peg.1171 CDS CP003496.2 1167845 1169215 2 + 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229908.peg.1172 CDS CP003496.2 1170438 1169347 -3 - 1092 Putative exported protein precursor - none -
fig|6666666.229908.peg.1173 CDS CP003496.2 1171325 1170576 -2 - 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229908.peg.1174 CDS CP003496.2 1172024 1171353 -2 - 672 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229908.peg.1175 CDS CP003496.2 1172330 1173178 2 + 849 hypothetical protein - none -
fig|6666666.229908.peg.1176 CDS CP003496.2 1173196 1173531 1 + 336 hypothetical protein - none -
fig|6666666.229908.peg.1177 CDS CP003496.2 1173573 1173908 3 + 336 hypothetical protein - none -
fig|6666666.229908.peg.1178 CDS CP003496.2 1174005 1176098 3 + 2094 hypothetical protein - none -
fig|6666666.229908.peg.1179 CDS CP003496.2 1176139 1176297 1 + 159 hypothetical protein - none -
fig|6666666.229908.peg.1180 CDS CP003496.2 1176727 1178532 1 + 1806 VgrG-3 protein - none -
fig|6666666.229908.peg.1181 CDS CP003496.2 1178695 1180107 1 + 1413 hypothetical protein - none -
fig|6666666.229908.peg.1182 CDS CP003496.2 1180931 1183063 2 + 2133 hypothetical protein - none -
fig|6666666.229908.peg.1183 CDS CP003496.2 1183067 1183648 2 + 582 hypothetical protein - none -
fig|6666666.229908.peg.1184 CDS CP003496.2 1183860 1184291 3 + 432 hypothetical protein - none -
fig|6666666.229908.peg.1185 CDS CP003496.2 1184413 1184541 1 + 129 hypothetical protein - none -
fig|6666666.229908.peg.1186 CDS CP003496.2 1184545 1184694 1 + 150 hypothetical protein - none -
fig|6666666.229908.peg.1187 CDS CP003496.2 1185056 1185382 2 + 327 VgrG-3 protein - none -
fig|6666666.229908.peg.1188 CDS CP003496.2 1185567 1185409 -3 - 159 hypothetical protein - none -
fig|6666666.229908.peg.1189 CDS CP003496.2 1185730 1186902 1 + 1173 hypothetical protein - none -
fig|6666666.229908.peg.1190 CDS CP003496.2 1186909 1189713 1 + 2805 hypothetical protein - none -
fig|6666666.229908.peg.1191 CDS CP003496.2 1189753 1190583 1 + 831 hypothetical protein - none -
fig|6666666.229908.peg.1192 CDS CP003496.2 1190729 1190851 2 + 123 hypothetical protein - none -
fig|6666666.229908.peg.1193 CDS CP003496.2 1191155 1191706 2 + 552 hypothetical protein - none -
fig|6666666.229908.peg.1194 CDS CP003496.2 1191751 1191888 1 + 138 hypothetical protein - none -
fig|6666666.229908.peg.1195 CDS CP003496.2 1192162 1191968 -1 - 195 hypothetical protein - none -
fig|6666666.229908.peg.1196 CDS CP003496.2 1194416 1194538 2 + 123 hypothetical protein - none -
fig|6666666.229908.peg.1197 CDS CP003496.2 1195107 1195964 3 + 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.229908.peg.1198 CDS CP003496.2 1197687 1196053 -3 - 1635 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229908.peg.1199 CDS CP003496.2 1198097 1197807 -2 - 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229908.peg.1200 CDS CP003496.2 1198666 1198184 -1 - 483 FxsA protein - none -
fig|6666666.229908.peg.1201 CDS CP003496.2 1198896 1200314 3 + 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229908.peg.1202 CDS CP003496.2 1200495 1201532 3 + 1038 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229908.peg.1203 CDS CP003496.2 1203037 1202201 -1 - 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229908.peg.1204 CDS CP003496.2 1203856 1203053 -1 - 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229908.peg.1205 CDS CP003496.2 1204866 1203868 -3 - 999 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229908.peg.1206 CDS CP003496.2 1205216 1206607 2 + 1392 Permeases of the major facilitator superfamily - none -
fig|6666666.229908.peg.1207 CDS CP003496.2 1206802 1208205 1 + 1404 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) Mannose Metabolism
fig|6666666.229908.peg.1208 CDS CP003496.2 1208229 1209020 3 + 792 O-antigen export system permease protein RfbD - none -
fig|6666666.229908.peg.1209 CDS CP003496.2 1209017 1209769 2 + 753 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) - none -
fig|6666666.229908.peg.1210 CDS CP003496.2 1209817 1212750 1 + 2934 Possible glycosyltransferase WbpX (EC 2.4.1.-) - none -
fig|6666666.229908.peg.1211 CDS CP003496.2 1212763 1213647 1 + 885 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization
fig|6666666.229908.peg.1212 CDS CP003496.2 1213649 1214842 2 + 1194 hypothetical protein - none -
fig|6666666.229908.peg.1213 CDS CP003496.2 1214875 1215909 1 + 1035 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) Capsular heptose biosynthesis
fig|6666666.229908.peg.1214 CDS CP003496.2 1215998 1217170 2 + 1173 glycosyl transferase, group 1 family protein - none -
fig|6666666.229908.peg.1215 CDS CP003496.2 1217172 1218263 3 + 1092 Glycosyltransferase - none -
fig|6666666.229908.peg.1216 CDS CP003496.2 1218274 1219692 1 + 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229908.peg.1217 CDS CP003496.2 1220913 1219738 -3 - 1176 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229908.peg.1218 CDS CP003496.2 1220902 1221024 1 + 123 hypothetical protein - none -
fig|6666666.229908.peg.1219 CDS CP003496.2 1222374 1221028 -3 - 1347 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229908.peg.1220 CDS CP003496.2 1223623 1222427 -1 - 1197 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229908.peg.1221 CDS CP003496.2 1224839 1223712 -2 - 1128 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229908.peg.1222 CDS CP003496.2 1226354 1224843 -2 - 1512 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229908.peg.1223 CDS CP003496.2 1227412 1226414 -1 - 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229908.peg.1224 CDS CP003496.2 1227670 1228989 1 + 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229908.peg.1225 CDS CP003496.2 1229039 1230016 2 + 978 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229908.peg.1226 CDS CP003496.2 1230038 1230511 2 + 474 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229908.peg.1227 CDS CP003496.2 1231196 1231393 2 + 198 VgrG-3 protein - none -
fig|6666666.229908.peg.1228 CDS CP003496.2 1231982 1232617 2 + 636 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229908.peg.1229 CDS CP003496.2 1233532 1232684 -1 - 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229908.peg.1230 CDS CP003496.2 1233842 1233717 -2 - 126 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229908.peg.1231 CDS CP003496.2 1234031 1233900 -2 - 132 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229908.peg.1232 CDS CP003496.2 1235072 1234047 -2 - 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229908.peg.1233 CDS CP003496.2 1236790 1235087 -1 - 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) Nitrate and nitrite ammonification
fig|6666666.229908.peg.1234 CDS CP003496.2 1236836 1237000 2 + 165 hypothetical protein - none -
fig|6666666.229908.peg.1235 CDS CP003496.2 1237066 1237350 1 + 285 periplasmic diheme c-type cytochrome, NapB Nitrate and nitrite ammonification
fig|6666666.229908.peg.1236 CDS CP003496.2 1237384 1239870 1 + 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) Nitrate and nitrite ammonification
fig|6666666.229908.peg.1237 CDS CP003496.2 1239897 1240757 3 + 861 Ferredoxin-type protein NapG (periplasmic nitrate reductase) Nitrate and nitrite ammonification
fig|6666666.229908.peg.1238 CDS CP003496.2 1240757 1241638 2 + 882 Polyferredoxin NapH (periplasmic nitrate reductase) Nitrate and nitrite ammonification
fig|6666666.229908.peg.1239 CDS CP003496.2 1241676 1242125 3 + 450 Nitrate reductase cytochrome c550-type subunit Nitrate and nitrite ammonification
fig|6666666.229908.peg.1240 CDS CP003496.2 1242139 1242774 1 + 636 Cytochrome c-type protein NapC Nitrate and nitrite ammonification
fig|6666666.229908.peg.1241 CDS CP003496.2 1244764 1242869 -1 - 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229908.peg.1242 CDS CP003496.2 1245925 1244882 -1 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229908.peg.1243 CDS CP003496.2 1247072 1245945 -2 - 1128 Fic family protein - none -
fig|6666666.229908.peg.1244 CDS CP003496.2 1248168 1247242 -3 - 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229908.peg.1245 CDS CP003496.2 1248448 1249224 1 + 777 Protein HI0205 precursor - none -
fig|6666666.229908.peg.1246 CDS CP003496.2 1249251 1251065 3 + 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229908.peg.1247 CDS CP003496.2 1252321 1251452 -1 - 870 hypothetical protein - none -
fig|6666666.229908.peg.1248 CDS CP003496.2 1254939 1252648 -3 - 2292 hypothetical protein - none -
fig|6666666.229908.peg.1249 CDS CP003496.2 1255325 1254921 -2 - 405 hypothetical protein - none -
fig|6666666.229908.peg.1250 CDS CP003496.2 1255559 1255398 -2 - 162 hypothetical protein - none -
fig|6666666.229908.peg.1251 CDS CP003496.2 1256964 1255570 -3 - 1395 hypothetical protein - none -
fig|6666666.229908.peg.1252 CDS CP003496.2 1258602 1257358 -3 - 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1253 CDS CP003496.2 1259361 1258633 -3 - 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1254 CDS CP003496.2 1259854 1259411 -1 - 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1255 CDS CP003496.2 1261070 1259847 -2 - 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1256 CDS CP003496.2 1261558 1261079 -1 - 480 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1257 CDS CP003496.2 1263961 1261688 -1 - 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1258 CDS CP003496.2 1264552 1263968 -1 - 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1259 CDS CP003496.2 1264995 1264549 -3 - 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1260 CDS CP003496.2 1265918 1264992 -2 - 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1261 CDS CP003496.2 1266637 1265915 -1 - 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1262 CDS CP003496.2 1267998 1266637 -3 - 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1263 CDS CP003496.2 1268540 1267995 -2 - 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1264 CDS CP003496.2 1270233 1268566 -3 - 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1265 CDS CP003496.2 1270484 1270233 -2 - 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1266 CDS CP003496.2 1270750 1270487 -1 - 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1267 CDS CP003496.2 1271516 1270728 -2 - 789 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1268 CDS CP003496.2 1272244 1271501 -1 - 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229908.peg.1269 CDS CP003496.2 1272625 1273050 1 + 426 Excinuclease ATPase subunit - none -
fig|6666666.229908.peg.1270 CDS CP003496.2 1273865 1273152 -2 - 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229908.peg.1271 CDS CP003496.2 1274770 1273880 -1 - 891 Tyrosine recombinase XerC - none -
fig|6666666.229908.peg.1272 CDS CP003496.2 1275604 1274780 -1 - 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229908.peg.1273 CDS CP003496.2 1275862 1275683 -1 - 180 hypothetical protein - none -
fig|6666666.229908.peg.1274 CDS CP003496.2 1276890 1275862 -3 - 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229908.peg.1275 CDS CP003496.2 1277073 1277573 3 + 501 hypothetical protein - none -
fig|6666666.229908.peg.1276 CDS CP003496.2 1277546 1277695 2 + 150 hypothetical protein - none -
fig|6666666.229908.peg.1277 CDS CP003496.2 1280244 1277674 -3 - 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229908.peg.1278 CDS CP003496.2 1280509 1281090 1 + 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229908.peg.1279 CDS CP003496.2 1282277 1281165 -2 - 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229908.peg.1280 CDS CP003496.2 1283273 1282461 -2 - 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229908.peg.1281 CDS CP003496.2 1283419 1284105 1 + 687 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.229908.peg.1282 CDS CP003496.2 1284217 1284801 1 + 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229908.peg.1283 CDS CP003496.2 1285188 1284988 -3 - 201 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Riboflavin synthesis cluster
fig|6666666.229908.peg.1284 CDS CP003496.2 1286713 1285298 -1 - 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229908.peg.1285 CDS CP003496.2 1286827 1288461 1 + 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229908.peg.1286 CDS CP003496.2 1290641 1288530 -2 - 2112 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229908.peg.1287 CDS CP003496.2 1292502 1290634 -3 - 1869 ATPase family protein - none -
fig|6666666.229908.peg.1288 CDS CP003496.2 1292684 1292550 -2 - 135 hypothetical protein - none -
fig|6666666.229908.peg.1289 CDS CP003496.2 1293159 1292821 -3 - 339 FIG074102: hypothetical protein - none -
fig|6666666.229908.peg.1290 CDS CP003496.2 1293589 1293281 -1 - 309 FIG074102: hypothetical protein - none -
fig|6666666.229908.peg.1291 CDS CP003496.2 1293889 1293629 -1 - 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229908.peg.1292 CDS CP003496.2 1294844 1293939 -2 - 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229908.peg.1293 CDS CP003496.2 1295198 1294989 -2 - 210 Ferredoxin-type protein NapF (periplasmic nitrate reductase) Nitrate and nitrite ammonification
fig|6666666.229908.peg.1294 CDS CP003496.2 1295826 1295212 -3 - 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229908.peg.1295 CDS CP003496.2 1296699 1295860 -3 - 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229908.peg.1296 CDS CP003496.2 1297318 1296701 -1 - 618 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229908.peg.1297 CDS CP003496.2 1299554 1297329 -2 - 2226 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229908.peg.1298 CDS CP003496.2 1303057 1300256 -1 - 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229908.peg.1299 CDS CP003496.2 1303274 1303837 2 + 564 Outer membrane protein 18/16 - none -
fig|6666666.229908.peg.1300 CDS CP003496.2 1303941 1304171 3 + 231 FIG00696102: hypothetical protein - none -
fig|6666666.229908.peg.1301 CDS CP003496.2 1304181 1306196 3 + 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229908.peg.1302 CDS CP003496.2 1307092 1306712 -1 - 381 FIG00782409: hypothetical protein - none -
fig|6666666.229908.peg.1303 CDS CP003496.2 1307220 1307822 3 + 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229908.peg.1304 CDS CP003496.2 1307822 1308427 2 + 606 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229908.peg.1305 CDS CP003496.2 1308430 1308915 1 + 486 Putative membrane protein - none -
fig|6666666.229908.peg.1306 CDS CP003496.2 1309127 1309633 2 + 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229908.peg.1307 CDS CP003496.2 1309800 1309964 3 + 165 hypothetical protein - none -
fig|6666666.229908.peg.1308 CDS CP003496.2 1310105 1311334 2 + 1230 hypothetical protein - none -
fig|6666666.229908.peg.1309 CDS CP003496.2 1311321 1313264 3 + 1944 hypothetical protein - none -
fig|6666666.229908.peg.1310 CDS CP003496.2 1313554 1314684 1 + 1131 hypothetical protein - none -
fig|6666666.229908.peg.1311 CDS CP003496.2 1314689 1314823 2 + 135 hypothetical protein - none -
fig|6666666.229908.peg.1312 CDS CP003496.2 1314868 1315176 1 + 309 Mobile element protein - none -
fig|6666666.229908.peg.1313 CDS CP003496.2 1315253 1317454 2 + 2202 Probable phospholipase protein - none -
fig|6666666.229908.peg.1314 CDS CP003496.2 1317550 1318608 1 + 1059 probable lipoprotein - none -
fig|6666666.229908.peg.1315 CDS CP003496.2 1318680 1319852 3 + 1173 miscellaneous; hypothetical/partial homology - none -
fig|6666666.229908.peg.1316 CDS CP003496.2 1319978 1320127 2 + 150 hypothetical protein - none -
fig|6666666.229908.peg.1317 CDS CP003496.2 1320788 1320390 -2 - 399 Integrase - none -
fig|6666666.229908.peg.1318 CDS CP003496.2 1321688 1321458 -2 - 231 hypothetical protein - none -
fig|6666666.229908.peg.1319 CDS CP003496.2 1322160 1321954 -3 - 207 hypothetical protein - none -
fig|6666666.229908.peg.1320 CDS CP003496.2 1322521 1322150 -1 - 372 FIG00696117: hypothetical protein - none -
fig|6666666.229908.peg.1321 CDS CP003496.2 1323317 1322514 -2 - 804 FIG00698594: hypothetical protein - none -
fig|6666666.229908.peg.1322 CDS CP003496.2 1323705 1323592 -3 - 114 hypothetical protein - none -
fig|6666666.229908.peg.1323 CDS CP003496.2 1324112 1323687 -2 - 426 hypothetical protein - none -
fig|6666666.229908.peg.1324 CDS CP003496.2 1324948 1324184 -1 - 765 Phage antirepressor protein - none -
fig|6666666.229908.peg.1325 CDS CP003496.2 1325547 1325242 -3 - 306 hypothetical protein - none -
fig|6666666.229908.peg.1326 CDS CP003496.2 1325949 1325719 -3 - 231 hypothetical protein - none -
fig|6666666.229908.peg.1327 CDS CP003496.2 1326507 1326055 -3 - 453 hypothetical protein - none -
fig|6666666.229908.peg.1328 CDS CP003496.2 1326781 1326521 -1 - 261 hypothetical protein - none -
fig|6666666.229908.peg.1329 CDS CP003496.2 1327001 1326792 -2 - 210 possible prophage CP4-57 regulatory protein - none -
fig|6666666.229908.peg.1330 CDS CP003496.2 1327964 1327188 -2 - 777 hypothetical protein - none -
fig|6666666.229908.peg.1331 CDS CP003496.2 1328645 1327974 -2 - 672 hypothetical protein - none -
fig|6666666.229908.peg.1332 CDS CP003496.2 1330063 1328819 -1 - 1245 Integrase - none -
fig|6666666.229908.peg.1333 CDS CP003496.2 1331186 1330959 -2 - 228 FIG00354920: hypothetical protein - none -
fig|6666666.229908.peg.1334 CDS CP003496.2 1333834 1331183 -1 - 2652 Putative uncharacterized protein ydbH - none -
fig|6666666.229908.peg.1335 CDS CP003496.2 1334638 1334021 -1 - 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229908.peg.1336 CDS CP003496.2 1334719 1336644 1 + 1926 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229908.peg.1337 CDS CP003496.2 1336792 1337850 1 + 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229908.peg.1338 CDS CP003496.2 1337932 1338390 1 + 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229908.peg.1339 CDS CP003496.2 1338463 1338852 1 + 390 Endoribonuclease L-PSP - none -
fig|6666666.229908.peg.1340 CDS CP003496.2 1341032 1338921 -2 - 2112 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229908.peg.1341 CDS CP003496.2 1342004 1341051 -2 - 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229908.peg.1343 CDS CP003496.2 1348171 1348824 1 + 654 Mobile element protein - none -
fig|6666666.229908.peg.1344 CDS CP003496.2 1348775 1349194 2 + 420 Mobile element protein - none -
fig|6666666.229908.peg.1345 CDS CP003496.2 1349941 1349423 -1 - 519 Mobile element protein - none -
fig|6666666.229908.peg.1346 CDS CP003496.2 1350450 1350253 -3 - 198 Mobile element protein - none -
fig|6666666.229908.peg.1347 CDS CP003496.2 1350603 1350469 -3 - 135 hypothetical protein - none -
fig|6666666.229908.peg.1348 CDS CP003496.2 1352937 1351360 -3 - 1578 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229908.peg.1349 CDS CP003496.2 1353532 1352954 -1 - 579 Flp pilus assembly surface protein TadF, ATP/GTP-binding motif Widespread colonization island
fig|6666666.229908.peg.1350 CDS CP003496.2 1354948 1354187 -1 - 762 Flp pilus assembly protein TadD, contains TPR repeat Widespread colonization island
fig|6666666.229908.peg.1351 CDS CP003496.2 1355804 1354938 -2 - 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229908.peg.1352 CDS CP003496.2 1356688 1355801 -1 - 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229908.peg.1353 CDS CP003496.2 1357968 1356688 -3 - 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229908.peg.1354 CDS CP003496.2 1359106 1357982 -1 - 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229908.peg.1355 CDS CP003496.2 1359625 1359122 -1 - 504 Flp pilus assembly protein RcpB Widespread colonization island
fig|6666666.229908.peg.1356 CDS CP003496.2 1361004 1359622 -3 - 1383 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229908.peg.1357 CDS CP003496.2 1361830 1361006 -1 - 825 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229908.peg.1358 CDS CP003496.2 1362208 1361882 -1 - 327 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229908.peg.1359 CDS CP003496.2 1362875 1362648 -2 - 228 Flp pilus assembly protein, pilin Flp Widespread colonization island
fig|6666666.229908.peg.1360 CDS CP003496.2 1363395 1363643 3 + 249 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229908.peg.1361 CDS CP003496.2 1363631 1364095 2 + 465 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229908.peg.1362 CDS CP003496.2 1364257 1364958 1 + 702 unknown - none -
fig|6666666.229908.peg.1363 CDS CP003496.2 1364962 1366887 1 + 1926 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Archaea;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229908.peg.1364 CDS CP003496.2 1366925 1367098 2 + 174 hypothetical protein - none -
fig|6666666.229908.peg.1365 CDS CP003496.2 1367794 1367165 -1 - 630 Mobile element protein - none -
fig|6666666.229908.peg.1366 CDS CP003496.2 1368429 1371887 3 + 3459 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229908.peg.1367 CDS CP003496.2 1371989 1372573 2 + 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229908.peg.1368 CDS CP003496.2 1372714 1373448 1 + 735 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229908.peg.1369 CDS CP003496.2 1373469 1374188 3 + 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229908.peg.1370 CDS CP003496.2 1374193 1374855 1 + 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229908.peg.1371 CDS CP003496.2 1374855 1375541 3 + 687 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229908.peg.1372 CDS CP003496.2 1376083 1377681 1 + 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229908.peg.1373 CDS CP003496.2 1377945 1378403 3 + 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229908.peg.1374 CDS CP003496.2 1378513 1379481 1 + 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229908.peg.1375 CDS CP003496.2 1379481 1379798 3 + 318 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229908.peg.1376 CDS CP003496.2 1379816 1381639 2 + 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229908.peg.1377 CDS CP003496.2 1381657 1383123 1 + 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229908.peg.1378 CDS CP003496.2 1383179 1384507 2 + 1329 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229908.peg.1379 CDS CP003496.2 1384501 1385586 1 + 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229908.peg.1380 CDS CP003496.2 1385613 1386917 3 + 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229908.peg.1381 CDS CP003496.2 1386932 1388122 2 + 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229908.peg.1382 CDS CP003496.2 1388162 1389226 2 + 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229908.peg.1383 CDS CP003496.2 1389234 1390727 3 + 1494 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229908.peg.1384 CDS CP003496.2 1390740 1391669 3 + 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229908.peg.1385 CDS CP003496.2 1391666 1392433 2 + 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229908.peg.1386 CDS CP003496.2 1392458 1393738 2 + 1281 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229908.peg.1387 CDS CP003496.2 1393822 1395102 1 + 1281 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229908.peg.1388 CDS CP003496.2 1395140 1396057 2 + 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) KDO2-Lipid A biosynthesis
fig|6666666.229908.peg.1389 CDS CP003496.2 1396256 1397416 2 + 1161 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229908.peg.1390 CDS CP003496.2 1397550 1399430 3 + 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229908.peg.1391 CDS CP003496.2 1399496 1399840 2 + 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352
fig|6666666.229908.peg.1392 CDS CP003496.2 1399977 1401110 3 + 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229908.peg.1393 CDS CP003496.2 1401112 1401792 1 + 681 FIG009095: D,D-carboxypeptidase family protein CBSS-584.1.peg.1352
fig|6666666.229908.peg.1394 CDS CP003496.2 1402038 1402661 3 + 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229908.peg.1395 CDS CP003496.2 1402712 1403536 2 + 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229908.peg.1396 CDS CP003496.2 1404874 1404047 -1 - 828 FIG00711691: hypothetical protein - none -
fig|6666666.229908.peg.1397 CDS CP003496.2 1405311 1404847 -3 - 465 FIG00710847: hypothetical protein - none -
fig|6666666.229908.peg.1398 CDS CP003496.2 1405533 1406363 3 + 831 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229908.peg.1399 CDS CP003496.2 1406488 1407702 1 + 1215 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229908.peg.1400 CDS CP003496.2 1408809 1407781 -3 - 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.1401 CDS CP003496.2 1409080 1411218 1 + 2139 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229908.peg.1402 CDS CP003496.2 1411659 1411315 -3 - 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229908.peg.1403 CDS CP003496.2 1412061 1411669 -3 - 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229908.peg.1404 CDS CP003496.2 1412843 1412073 -2 - 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229908.peg.1405 CDS CP003496.2 1414656 1412848 -3 - 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229908.peg.1406 CDS CP003496.2 1414900 1414712 -1 - 189 hypothetical protein - none -
fig|6666666.229908.peg.1407 CDS CP003496.2 1414964 1415935 2 + 972 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229908.peg.1408 CDS CP003496.2 1416768 1416001 -3 - 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229908.peg.1409 CDS CP003496.2 1417562 1416768 -2 - 795 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229908.peg.1410 CDS CP003496.2 1417752 1417582 -3 - 171 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229908.peg.1411 CDS CP003496.2 1418741 1417752 -2 - 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229908.peg.1412 CDS CP003496.2 1419634 1418741 -1 - 894 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229908.peg.1413 CDS CP003496.2 1420773 1419703 -3 - 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229908.peg.1414 CDS CP003496.2 1420844 1421287 2 + 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229908.peg.1415 CDS CP003496.2 1421372 1421974 2 + 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229908.peg.1416 CDS CP003496.2 1422006 1423943 3 + 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229908.peg.1417 CDS CP003496.2 1424116 1424445 1 + 330 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.229908.peg.1418 CDS CP003496.2 1424811 1424665 -3 - 147 hypothetical protein - none -
fig|6666666.229908.peg.1419 CDS CP003496.2 1424882 1425082 2 + 201 hypothetical protein - none -
fig|6666666.229908.peg.1420 CDS CP003496.2 1425912 1425139 -3 - 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229908.peg.1421 CDS CP003496.2 1426198 1425890 -1 - 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229908.peg.1422 CDS CP003496.2 1428447 1426231 -3 - 2217 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229908.peg.1423 CDS CP003496.2 1429270 1428974 -1 - 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229908.peg.1424 CDS CP003496.2 1429743 1429273 -3 - 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229908.peg.1425 CDS CP003496.2 1430298 1429747 -3 - 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229908.peg.1426 CDS CP003496.2 1431062 1430304 -2 - 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229908.peg.1427 CDS CP003496.2 1431335 1431544 2 + 210 hypothetical protein - none -
fig|6666666.229908.peg.1428 CDS CP003496.2 1431564 1431983 3 + 420 Outer membrane protein W precursor - none -
fig|6666666.229908.peg.1429 CDS CP003496.2 1433727 1432051 -3 - 1677 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229908.peg.1430 CDS CP003496.2 1434718 1433801 -1 - 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229908.peg.1431 CDS CP003496.2 1434891 1434763 -3 - 129 hypothetical protein - none -
fig|6666666.229908.peg.1432 CDS CP003496.2 1434859 1435437 1 + 579 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229908.peg.1433 CDS CP003496.2 1438618 1435547 -1 - 3072 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229908.peg.1434 CDS CP003496.2 1440826 1438808 -1 - 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229908.peg.1435 CDS CP003496.2 1440997 1442217 1 + 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229908.peg.1436 CDS CP003496.2 1442332 1442198 -1 - 135 hypothetical protein - none -
fig|6666666.229908.peg.1437 CDS CP003496.2 1442358 1444205 3 + 1848 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229908.peg.1438 CDS CP003496.2 1445290 1444280 -1 - 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229908.peg.1439 CDS CP003496.2 1446350 1445268 -2 - 1083 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229908.peg.1440 CDS CP003496.2 1446836 1446357 -2 - 480 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229908.peg.1441 CDS CP003496.2 1447904 1446912 -2 - 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229908.peg.1442 CDS CP003496.2 1449132 1448119 -3 - 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229908.peg.1443 CDS CP003496.2 1449374 1450417 2 + 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229908.peg.1444 CDS CP003496.2 1450485 1451639 3 + 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229908.peg.1445 CDS CP003496.2 1451633 1452664 2 + 1032 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229908.peg.1446 CDS CP003496.2 1454428 1452929 -1 - 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229908.peg.1447 CDS CP003496.2 1456140 1454707 -3 - 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229908.peg.1448 CDS CP003496.2 1457539 1456127 -1 - 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229908.peg.1449 CDS CP003496.2 1459235 1457733 -2 - 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229908.peg.1450 CDS CP003496.2 1460125 1459250 -1 - 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229908.peg.1451 CDS CP003496.2 1460409 1460122 -3 - 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229908.peg.1452 CDS CP003496.2 1461456 1460449 -3 - 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229908.peg.1453 CDS CP003496.2 1461622 1461494 -1 - 129 hypothetical protein - none -
fig|6666666.229908.peg.1454 CDS CP003496.2 1461702 1462598 3 + 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229908.peg.1455 CDS CP003496.2 1462990 1464534 1 + 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229908.peg.1456 CDS CP003496.2 1464815 1464597 -2 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229908.peg.1457 CDS CP003496.2 1464840 1464992 3 + 153 hypothetical protein - none -
fig|6666666.229908.peg.1458 CDS CP003496.2 1465035 1466342 3 + 1308 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229908.peg.1459 CDS CP003496.2 1466354 1466779 2 + 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229908.peg.1460 CDS CP003496.2 1466915 1468060 2 + 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229908.peg.1461 CDS CP003496.2 1468168 1468323 1 + 156 Mobile element protein - none -
fig|6666666.229908.peg.1462 CDS CP003496.2 1468372 1468539 1 + 168 hypothetical protein - none -
fig|6666666.229908.peg.1463 CDS CP003496.2 1469859 1468690 -3 - 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229908.peg.1464 CDS CP003496.2 1470067 1469876 -1 - 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229908.peg.1465 CDS CP003496.2 1470657 1470082 -3 - 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229908.peg.1466 CDS CP003496.2 1471425 1470685 -3 - 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229908.peg.1467 CDS CP003496.2 1472468 1471458 -2 - 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229908.peg.1468 CDS CP003496.2 1472944 1472465 -1 - 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229908.peg.1469 CDS CP003496.2 1473636 1472941 -3 - 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229908.peg.1470 CDS CP003496.2 1473914 1473636 -2 - 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229908.peg.1471 CDS CP003496.2 1474066 1474740 1 + 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229908.peg.1472 CDS CP003496.2 1474743 1475417 3 + 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229908.peg.1473 CDS CP003496.2 1475912 1476916 2 + 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229908.peg.1474 CDS CP003496.2 1477647 1477003 -3 - 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229908.peg.1475 CDS CP003496.2 1479675 1478173 -3 - 1503 Sodium-dependent transporter - none -
fig|6666666.229908.peg.1476 CDS CP003496.2 1480094 1480369 2 + 276 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229908.peg.1477 CDS CP003496.2 1480371 1481087 3 + 717 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229908.peg.1478 CDS CP003496.2 1481469 1481341 -3 - 129 hypothetical protein - none -
fig|6666666.229908.peg.1479 CDS CP003496.2 1482622 1482203 -1 - 420 Mobile element protein - none -
fig|6666666.229908.peg.1480 CDS CP003496.2 1483226 1482573 -2 - 654 Mobile element protein - none -
fig|6666666.229908.peg.1481 CDS CP003496.2 1483466 1484095 2 + 630 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - none -
fig|6666666.229908.peg.1482 CDS CP003496.2 1485596 1485372 -2 - 225 hypothetical protein - none -
fig|6666666.229908.peg.1483 CDS CP003496.2 1486117 1485791 -1 - 327 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229908.peg.1484 CDS CP003496.2 1486357 1486758 1 + 402 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229908.peg.1485 CDS CP003496.2 1486904 1486767 -2 - 138 hypothetical protein - none -
fig|6666666.229908.peg.1486 CDS CP003496.2 1487241 1486963 -3 - 279 hypothetical protein - none -
fig|6666666.229908.peg.1487 CDS CP003496.2 1488927 1487263 -3 - 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229908.peg.1488 CDS CP003496.2 1489873 1488932 -1 - 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229908.peg.1489 CDS CP003496.2 1491285 1489876 -3 - 1410 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229908.peg.1490 CDS CP003496.2 1491927 1491397 -3 - 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229908.peg.1491 CDS CP003496.2 1492610 1492026 -2 - 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229908.peg.1492 CDS CP003496.2 1492694 1492960 2 + 267 Protein yihD - none -
fig|6666666.229908.peg.1493 CDS CP003496.2 1492979 1493596 2 + 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229908.peg.1494 CDS CP003496.2 1493656 1493985 1 + 330 Protein yifE - none -
fig|6666666.229908.peg.1495 CDS CP003496.2 1494055 1495152 1 + 1098 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) RNA methylation;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229908.peg.1496 CDS CP003496.2 1495154 1495912 2 + 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229908.peg.1497 CDS CP003496.2 1496004 1496339 3 + 336 hypothetical protein - none -
fig|6666666.229908.peg.1498 CDS CP003496.2 1496394 1497767 3 + 1374 hypothetical protein - none -
fig|6666666.229908.peg.1499 CDS CP003496.2 1497769 1499088 1 + 1320 hypothetical protein - none -
fig|6666666.229908.peg.1500 CDS CP003496.2 1499814 1500041 3 + 228 hypothetical protein - none -
fig|6666666.229908.peg.1501 CDS CP003496.2 1500685 1503285 1 + 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229908.peg.1502 CDS CP003496.2 1504309 1503491 -1 - 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229908.peg.1503 CDS CP003496.2 1506179 1504503 -2 - 1677 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229908.peg.1504 CDS CP003496.2 1506247 1506375 1 + 129 hypothetical protein - none -
fig|6666666.229908.peg.1505 CDS CP003496.2 1506886 1506347 -1 - 540 Metal-dependent hydrolase - none -
fig|6666666.229908.peg.1506 CDS CP003496.2 1508397 1507057 -3 - 1341 FIG00782214: hypothetical protein - none -
fig|6666666.229908.peg.1507 CDS CP003496.2 1509774 1508422 -3 - 1353 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229908.peg.1508 CDS CP003496.2 1510639 1509863 -1 - 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229908.peg.1509 CDS CP003496.2 1511274 1510642 -3 - 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229908.peg.1510 CDS CP003496.2 1512515 1511271 -2 - 1245 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) - none -
fig|6666666.229908.peg.1511 CDS CP003496.2 1513339 1512518 -1 - 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229908.peg.1512 CDS CP003496.2 1513616 1514374 2 + 759 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229908.peg.1513 CDS CP003496.2 1514450 1514788 2 + 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229908.peg.1514 CDS CP003496.2 1514927 1515970 2 + 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229908.peg.1515 CDS CP003496.2 1515972 1516604 3 + 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229908.peg.1516 CDS CP003496.2 1516601 1517584 2 + 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229908.peg.1517 CDS CP003496.2 1517588 1518370 2 + 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229908.peg.1518 CDS CP003496.2 1518402 1518926 3 + 525 FIG00696143: hypothetical protein - none -
fig|6666666.229908.peg.1519 CDS CP003496.2 1519017 1520132 3 + 1116 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229908.peg.1520 CDS CP003496.2 1520110 1520334 1 + 225 Hemolysins and related proteins containing CBS domains - none -
fig|6666666.229908.peg.1521 CDS CP003496.2 1520750 1520565 -2 - 186 hypothetical protein - none -
fig|6666666.229908.peg.1522 CDS CP003496.2 1521721 1520957 -1 - 765 miscellaneous; hypothetical/partial homology - none -
fig|6666666.229908.peg.1523 CDS CP003496.2 1523838 1521721 -3 - 2118 Probable phospholipase protein - none -
fig|6666666.229908.peg.1524 CDS CP003496.2 1524142 1523870 -1 - 273 VgrG-3 protein - none -
fig|6666666.229908.peg.1525 CDS CP003496.2 1525056 1524373 -3 - 684 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229908.peg.1526 CDS CP003496.2 1525363 1527021 1 + 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229908.peg.1527 CDS CP003496.2 1527271 1528488 1 + 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229908.peg.1528 CDS CP003496.2 1528485 1529312 3 + 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229908.peg.1529 CDS CP003496.2 1530859 1529324 -1 - 1536 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.229908.peg.1530 CDS CP003496.2 1531588 1530974 -1 - 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229908.peg.1531 CDS CP003496.2 1531598 1531711 2 + 114 hypothetical protein - none -
fig|6666666.229908.peg.1532 CDS CP003496.2 1531721 1532596 2 + 876 Membrane protein LAPB - none -
fig|6666666.229908.peg.1533 CDS CP003496.2 1533168 1532692 -3 - 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) Biotin synthesis cluster;
RNA methylation
fig|6666666.229908.peg.1534 CDS CP003496.2 1533784 1533287 -1 - 498 Phospholipid-binding protein - none -
fig|6666666.229908.peg.1535 CDS CP003496.2 1534732 1533890 -1 - 843 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229908.peg.1536 CDS CP003496.2 1535444 1534767 -2 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229908.peg.1537 CDS CP003496.2 1536471 1535434 -3 - 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229908.peg.1538 CDS CP003496.2 1536667 1537224 1 + 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229908.peg.1540 CDS CP003496.2 1543425 1543559 3 + 135 hypothetical protein - none -
fig|6666666.229908.peg.1541 CDS CP003496.2 1543816 1544370 1 + 555 Mobile element protein - none -
fig|6666666.229908.peg.1542 CDS CP003496.2 1544352 1544600 3 + 249 Mobile element protein - none -
fig|6666666.229908.peg.1543 CDS CP003496.2 1546208 1544904 -2 - 1305 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229908.peg.1544 CDS CP003496.2 1547945 1546614 -2 - 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229908.peg.1545 CDS CP003496.2 1547932 1548060 1 + 129 hypothetical protein - none -
fig|6666666.229908.peg.1546 CDS CP003496.2 1548044 1548742 2 + 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229908.peg.1547 CDS CP003496.2 1549506 1548817 -3 - 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229908.peg.1548 CDS CP003496.2 1549887 1550546 3 + 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229908.peg.1549 CDS CP003496.2 1550568 1550684 3 + 117 hypothetical protein - none -
fig|6666666.229908.peg.1550 CDS CP003496.2 1551583 1550681 -1 - 903 VgrG-3 protein - none -
fig|6666666.229908.peg.1551 CDS CP003496.2 1552126 1552686 1 + 561 Protein of unknown function DUF414 - none -
fig|6666666.229908.peg.1552 CDS CP003496.2 1552699 1553133 1 + 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229908.peg.1553 CDS CP003496.2 1553152 1554519 1 + 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229908.peg.1554 CDS CP003496.2 1555036 1554593 -1 - 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229908.peg.1555 CDS CP003496.2 1555209 1555976 3 + 768 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229908.peg.1556 CDS CP003496.2 1556088 1556945 3 + 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229908.peg.1557 CDS CP003496.2 1556985 1557404 3 + 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229908.peg.1558 CDS CP003496.2 1557386 1557715 2 + 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229908.peg.1559 CDS CP003496.2 1557696 1558697 3 + 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229908.peg.1560 CDS CP003496.2 1558796 1559272 2 + 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229908.peg.1561 CDS CP003496.2 1559379 1559227 -3 - 153 hypothetical protein - none -
fig|6666666.229908.peg.1562 CDS CP003496.2 1559396 1559863 2 + 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229908.peg.1563 CDS CP003496.2 1559907 1561253 3 + 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229908.peg.1564 CDS CP003496.2 1561362 1561496 3 + 135 hypothetical protein - none -
fig|6666666.229908.peg.1565 CDS CP003496.2 1561551 1562312 3 + 762 Periplasmic protein TonB, links inner and outer membranes - none -
fig|6666666.229908.peg.1566 CDS CP003496.2 1562431 1563819 1 + 1389 FOG: TPR repeat - none -
fig|6666666.229908.peg.1567 CDS CP003496.2 1563843 1564115 3 + 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229908.peg.1568 CDS CP003496.2 1564112 1565548 2 + 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229908.peg.1569 CDS CP003496.2 1565558 1566109 2 + 552 Protein involved in cell division - none -
fig|6666666.229908.peg.1570 CDS CP003496.2 1566122 1567006 2 + 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229908.peg.1571 CDS CP003496.2 1567251 1568300 3 + 1050 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229908.peg.1572 CDS CP003496.2 1568294 1568593 2 + 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229908.peg.1573 CDS CP003496.2 1569456 1569208 -3 - 249 unknown - none -
fig|6666666.229908.peg.1574 CDS CP003496.2 1570234 1569911 -1 - 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229908.peg.1575 CDS CP003496.2 1571836 1570463 -1 - 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229908.peg.1576 CDS CP003496.2 1572019 1571891 -1 - 129 hypothetical protein - none -
fig|6666666.229908.peg.1577 CDS CP003496.2 1572505 1572233 -1 - 273 FIG00904058: hypothetical protein - none -
fig|6666666.229908.peg.1578 CDS CP003496.2 1572717 1572505 -3 - 213 FIG003276: zinc-binding protein - none -
fig|6666666.229908.peg.1579 CDS CP003496.2 1573330 1572707 -1 - 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229908.peg.1580 CDS CP003496.2 1574092 1573715 -1 - 378 Mobile element protein - none -
fig|6666666.229908.peg.1581 CDS CP003496.2 1574933 1574685 -2 - 249 Mobile element protein - none -
fig|6666666.229908.peg.1582 CDS CP003496.2 1575469 1574915 -1 - 555 Mobile element protein - none -
fig|6666666.229908.peg.1583 CDS CP003496.2 1575860 1575726 -2 - 135 hypothetical protein - none -
fig|6666666.229908.peg.1584 CDS CP003496.2 1577455 1575890 -1 - 1566 hypothetical protein - none -
fig|6666666.229908.peg.1585 CDS CP003496.2 1577473 1577601 1 + 129 hypothetical protein - none -
fig|6666666.229908.peg.1586 CDS CP003496.2 1579879 1577606 -1 - 2274 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229908.peg.1587 CDS CP003496.2 1580007 1579876 -3 - 132 hypothetical protein - none -
fig|6666666.229908.peg.1588 CDS CP003496.2 1580111 1581712 2 + 1602 Dca - none -
fig|6666666.229908.peg.1589 CDS CP003496.2 1581816 1581676 -3 - 141 hypothetical protein - none -
fig|6666666.229908.peg.1590 CDS CP003496.2 1581971 1582537 2 + 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229908.peg.1591 CDS CP003496.2 1582547 1583779 2 + 1233 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229908.peg.1592 CDS CP003496.2 1584165 1583842 -3 - 324 FIG074102: hypothetical protein - none -
fig|6666666.229908.peg.1593 CDS CP003496.2 1584334 1584158 -1 - 177 Phage-related protein - none -
fig|6666666.229908.peg.1594 CDS CP003496.2 1585469 1584624 -2 - 846 membrane protein, putative - none -
fig|6666666.229908.peg.1595 CDS CP003496.2 1587701 1585542 -2 - 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229908.peg.1596 CDS CP003496.2 1588000 1587788 -1 - 213 Copper chaperone Copper homeostasis
fig|6666666.229908.peg.1597 CDS CP003496.2 1588259 1588480 2 + 222 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229908.peg.1598 CDS CP003496.2 1588695 1588886 3 + 192 Mobile element protein - none -
fig|6666666.229908.peg.1599 CDS CP003496.2 1589049 1589297 3 + 249 Mobile element protein - none -
fig|6666666.229908.peg.1600 CDS CP003496.2 1589744 1589965 2 + 222 probable transcription regulator - none -
fig|6666666.229908.peg.1601 CDS CP003496.2 1594482 1590214 -3 - 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229908.peg.1602 CDS CP003496.2 1598613 1594585 -3 - 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229908.peg.1603 CDS CP003496.2 1599255 1598884 -3 - 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster
fig|6666666.229908.peg.1604 CDS CP003496.2 1599798 1599307 -3 - 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster
fig|6666666.229908.peg.1605 CDS CP003496.2 1600139 1599969 -2 - 171 hypothetical protein - none -
fig|6666666.229908.peg.1606 CDS CP003496.2 1600843 1600154 -1 - 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster
fig|6666666.229908.peg.1607 CDS CP003496.2 1601276 1600848 -2 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster
fig|6666666.229908.peg.1608 CDS CP003496.2 1601983 1601432 -1 - 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229908.peg.1609 CDS CP003496.2 1602395 1601985 -2 - 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229908.peg.1610 CDS CP003496.2 1603537 1602833 -1 - 705 hypothetical protein - none -
fig|6666666.229908.peg.1611 CDS CP003496.2 1604174 1603785 -2 - 390 Mobile element protein - none -
fig|6666666.229908.peg.1612 CDS CP003496.2 1604461 1604180 -1 - 282 hypothetical protein - none -
fig|6666666.229908.peg.1613 CDS CP003496.2 1604729 1604553 -2 - 177 hypothetical protein - none -
fig|6666666.229908.peg.1614 CDS CP003496.2 1605748 1604738 -1 - 1011 hypothetical protein - none -
fig|6666666.229908.peg.1615 CDS CP003496.2 1607742 1605751 -3 - 1992 hypothetical protein - none -
fig|6666666.229908.peg.1616 CDS CP003496.2 1608712 1607894 -1 - 819 hypothetical protein - none -
fig|6666666.229908.peg.1617 CDS CP003496.2 1609037 1608825 -2 - 213 hypothetical protein - none -
fig|6666666.229908.peg.1618 CDS CP003496.2 1609226 1609056 -2 - 171 hypothetical protein - none -
fig|6666666.229908.peg.1619 CDS CP003496.2 1610088 1609402 -3 - 687 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229908.peg.1620 CDS CP003496.2 1611311 1610088 -2 - 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229908.peg.1621 CDS CP003496.2 1612713 1611304 -3 - 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229908.peg.1622 CDS CP003496.2 1613261 1612740 -2 - 522 Type IV pilin PilA Type IV pilus
fig|6666666.229908.peg.1623 CDS CP003496.2 1613314 1613868 1 + 555 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229908.peg.1624 CDS CP003496.2 1614807 1614334 -3 - 474 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229908.peg.1625 CDS CP003496.2 1614999 1617230 3 + 2232 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229908.peg.1626 CDS CP003496.2 1617315 1618217 3 + 903 Lipoprotein nlpI precursor - none -
fig|6666666.229908.peg.1627 CDS CP003496.2 1618344 1620131 3 + 1788 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229908.peg.1628 CDS CP003496.2 1620825 1620214 -3 - 612 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229908.peg.1629 CDS CP003496.2 1620882 1621037 3 + 156 Mobile element protein - none -
fig|6666666.229908.peg.1630 CDS CP003496.2 1621130 1622233 2 + 1104 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229908.peg.1631 CDS CP003496.2 1622365 1623639 1 + 1275 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229908.peg.1632 CDS CP003496.2 1623636 1624775 3 + 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229908.peg.1633 CDS CP003496.2 1625385 1624846 -3 - 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229908.peg.1634 CDS CP003496.2 1626986 1625625 -2 - 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229908.peg.1635 CDS CP003496.2 1627103 1627636 2 + 534 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229908.peg.1636 CDS CP003496.2 1629085 1627694 -1 - 1392 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229908.peg.1637 CDS CP003496.2 1629774 1629274 -3 - 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229908.peg.1638 CDS CP003496.2 1630769 1629825 -2 - 945 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229908.peg.1639 CDS CP003496.2 1630899 1631615 3 + 717 COG1720: Uncharacterized conserved protein tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229908.peg.1640 CDS CP003496.2 1631967 1631713 -3 - 255 Mobile element protein - none -
fig|6666666.229908.peg.1641 CDS CP003496.2 1632082 1631945 -1 - 138 hypothetical protein - none -
fig|6666666.229908.peg.1642 CDS CP003496.2 1632992 1632090 -2 - 903 hypothetical protein - none -
fig|6666666.229908.peg.1643 CDS CP003496.2 1634183 1632993 -2 - 1191 hypothetical protein - none -
fig|6666666.229908.peg.1644 CDS CP003496.2 1635807 1634203 -3 - 1605 hypothetical protein - none -
fig|6666666.229908.peg.1645 CDS CP003496.2 1636995 1635817 -3 - 1179 hypothetical protein - none -
fig|6666666.229908.peg.1646 CDS CP003496.2 1638203 1637268 -2 - 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229908.peg.1647 CDS CP003496.2 1638862 1638212 -1 - 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229908.peg.1648 CDS CP003496.2 1640277 1638901 -3 - 1377 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229908.peg.1649 CDS CP003496.2 1640365 1640949 1 + 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229908.peg.1650 CDS CP003496.2 1641248 1642213 2 + 966 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229908.peg.1651 CDS CP003496.2 1642231 1643028 1 + 798 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229908.peg.1652 CDS CP003496.2 1643042 1643878 2 + 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229908.peg.1653 CDS CP003496.2 1643988 1645163 3 + 1176 Cof protein - none -
fig|6666666.229908.peg.1654 CDS CP003496.2 1645454 1646704 2 + 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229908.peg.1655 CDS CP003496.2 1646830 1647549 1 + 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229908.peg.1656 CDS CP003496.2 1647567 1647710 3 + 144 hypothetical protein - none -
fig|6666666.229908.peg.1657 CDS CP003496.2 1647852 1650239 3 + 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229908.peg.1658 CDS CP003496.2 1650255 1650722 3 + 468 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229908.peg.1659 CDS CP003496.2 1650818 1652173 2 + 1356 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229908.peg.1660 CDS CP003496.2 1652182 1653417 1 + 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229908.peg.1661 CDS CP003496.2 1653420 1653713 3 + 294 AagD - none -
fig|6666666.229908.peg.1662 CDS CP003496.2 1653803 1653681 -2 - 123 hypothetical protein - none -
fig|6666666.229908.peg.1663 CDS CP003496.2 1655156 1653831 -2 - 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229908.peg.1664 CDS CP003496.2 1655327 1655959 2 + 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229908.peg.1665 CDS CP003496.2 1656051 1655911 -3 - 141 hypothetical protein - none -
fig|6666666.229908.peg.1666 CDS CP003496.2 1656707 1657168 2 + 462 Mobile element protein - none -
fig|6666666.229908.peg.1667 CDS CP003496.2 1657168 1657446 1 + 279 Mobile element protein - none -
fig|6666666.229908.peg.1668 CDS CP003496.2 1658100 1658246 3 + 147 hypothetical protein - none -
fig|6666666.229908.peg.1669 CDS CP003496.2 1659234 1658578 -3 - 657 Mobile element protein - none -
fig|6666666.229908.peg.1670 CDS CP003496.2 1659550 1659386 -1 - 165 Mobile element protein - none -
fig|6666666.229908.peg.1671 CDS CP003496.2 1660407 1660523 3 + 117 hypothetical protein - none -
fig|6666666.229908.peg.1672 CDS CP003496.2 1662738 1661734 -3 - 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229908.peg.1673 CDS CP003496.2 1662909 1663619 3 + 711 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229908.peg.1674 CDS CP003496.2 1663677 1663943 3 + 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229908.peg.1675 CDS CP003496.2 1663989 1666112 3 + 2124 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229908.peg.1676 CDS CP003496.2 1666114 1668195 1 + 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229908.peg.1677 CDS CP003496.2 1668188 1668682 2 + 495 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229908.peg.1678 CDS CP003496.2 1668716 1669543 2 + 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229908.peg.1680 CDS CP003496.2 1675265 1675777 2 + 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229908.peg.1681 CDS CP003496.2 1675843 1676799 1 + 957 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229908.peg.1682 CDS CP003496.2 1676799 1678154 3 + 1356 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229908.peg.1683 CDS CP003496.2 1678178 1679554 2 + 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229908.peg.1684 CDS CP003496.2 1679664 1680059 3 + 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229908.peg.1685 CDS CP003496.2 1680154 1680588 1 + 435 Ribonuclease E inhibitor RraB RNA processing and degradation, bacterial
fig|6666666.229908.peg.1686 CDS CP003496.2 1680639 1681358 3 + 720 probable periplasmic protein NMA1059 - none -
fig|6666666.229908.peg.1687 CDS CP003496.2 1681453 1682049 1 + 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229908.peg.1688 CDS CP003496.2 1682870 1682466 -2 - 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229908.peg.1689 CDS CP003496.2 1684326 1682995 -3 - 1332 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229908.peg.1690 CDS CP003496.2 1684537 1684821 1 + 285 hypothetical protein - none -
fig|6666666.229908.peg.1691 CDS CP003496.2 1684772 1685134 2 + 363 FIG00696564: hypothetical protein - none -
fig|6666666.229908.peg.1692 CDS CP003496.2 1685127 1685252 3 + 126 hypothetical protein - none -
fig|6666666.229908.peg.1693 CDS CP003496.2 1685668 1685318 -1 - 351 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229908.peg.1694 CDS CP003496.2 1685742 1686803 3 + 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229908.peg.1695 CDS CP003496.2 1687697 1686939 -2 - 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229908.peg.1696 CDS CP003496.2 1688184 1687732 -3 - 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229908.peg.1697 CDS CP003496.2 1688350 1689342 1 + 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229908.peg.1698 CDS CP003496.2 1690381 1689398 -1 - 984 tRNA dihydrouridine synthase A - none -
fig|6666666.229908.peg.1699 CDS CP003496.2 1691775 1690384 -3 - 1392 Chloride channel protein - none -
fig|6666666.229908.peg.1700 CDS CP003496.2 1692018 1693022 3 + 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229908.peg.1701 CDS CP003496.2 1693032 1693964 3 + 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229908.peg.1702 CDS CP003496.2 1694081 1695610 2 + 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229908.peg.1703 CDS CP003496.2 1695701 1696168 2 + 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229908.peg.1704 CDS CP003496.2 1697447 1696266 -2 - 1182 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.229908.peg.1705 CDS CP003496.2 1698808 1697465 -1 - 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229908.peg.1706 CDS CP003496.2 1699476 1698811 -3 - 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229908.peg.1707 CDS CP003496.2 1700141 1699488 -2 - 654 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229908.peg.1708 CDS CP003496.2 1700415 1701311 3 + 897 Transcriptional regulators, LysR family - none -
fig|6666666.229908.peg.1709 CDS CP003496.2 1701561 1701872 3 + 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229908.peg.1710 CDS CP003496.2 1701889 1702515 1 + 627 LSU ribosomal protein L3p (L3e) - none -
fig|6666666.229908.peg.1711 CDS CP003496.2 1702531 1703133 1 + 603 LSU ribosomal protein L4p (L1e) - none -
fig|6666666.229908.peg.1712 CDS CP003496.2 1703130 1703432 3 + 303 LSU ribosomal protein L23p (L23Ae) - none -
fig|6666666.229908.peg.1713 CDS CP003496.2 1703453 1704274 2 + 822 LSU ribosomal protein L2p (L8e) - none -
fig|6666666.229908.peg.1714 CDS CP003496.2 1704429 1704575 3 + 147 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229908.peg.1715 CDS CP003496.2 1704586 1704918 1 + 333 LSU ribosomal protein L22p (L17e) - none -
fig|6666666.229908.peg.1716 CDS CP003496.2 1704935 1705642 2 + 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229908.peg.1717 CDS CP003496.2 1705656 1706066 3 + 411 LSU ribosomal protein L16p (L10e) - none -
fig|6666666.229908.peg.1718 CDS CP003496.2 1706066 1706257 2 + 192 LSU ribosomal protein L29p (L35e) - none -
fig|6666666.229908.peg.1719 CDS CP003496.2 1706257 1706514 1 + 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229908.peg.1720 CDS CP003496.2 1707299 1707051 -2 - 249 Mobile element protein - none -
fig|6666666.229908.peg.1721 CDS CP003496.2 1707476 1707336 -2 - 141 Mobile element protein - none -
fig|6666666.229908.peg.1722 CDS CP003496.2 1707978 1707844 -3 - 135 hypothetical protein - none -
fig|6666666.229908.peg.1723 CDS CP003496.2 1708517 1708245 -2 - 273 Phage integrase - none -
fig|6666666.229908.peg.1724 CDS CP003496.2 1710762 1708912 -3 - 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229908.peg.1725 CDS CP003496.2 1712595 1710838 -3 - 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229908.peg.1726 CDS CP003496.2 1712932 1712717 -1 - 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229908.peg.1727 CDS CP003496.2 1712967 1713134 3 + 168 hypothetical protein - none -
fig|6666666.229908.peg.1728 CDS CP003496.2 1713157 1714185 1 + 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ;
YrdC-YciO-Sua5 protein family
fig|6666666.229908.peg.1729 CDS CP003496.2 1714250 1714483 2 + 234 unknown - none -
fig|6666666.229908.peg.1730 CDS CP003496.2 1714486 1715064 1 + 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229908.peg.1731 CDS CP003496.2 1717148 1715133 -2 - 2016 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229908.peg.1732 CDS CP003496.2 1717142 1717255 2 + 114 hypothetical protein - none -
fig|6666666.229908.peg.1733 CDS CP003496.2 1718385 1717252 -3 - 1134 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229908.peg.1734 CDS CP003496.2 1718430 1719254 3 + 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229908.peg.1735 CDS CP003496.2 1719368 1720315 2 + 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229908.peg.1736 CDS CP003496.2 1720393 1720280 -1 - 114 hypothetical protein - none -
fig|6666666.229908.peg.1737 CDS CP003496.2 1720681 1720535 -1 - 147 hypothetical protein - none -
fig|6666666.229908.peg.1738 CDS CP003496.2 1721334 1720753 -3 - 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229908.peg.1739 CDS CP003496.2 1722760 1721669 -1 - 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229908.peg.1740 CDS CP003496.2 1723533 1722949 -3 - 585 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229908.peg.1741 CDS CP003496.2 1724153 1723662 -2 - 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229908.peg.1742 CDS CP003496.2 1725108 1724164 -3 - 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229908.peg.1743 CDS CP003496.2 1725184 1725861 1 + 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229908.peg.1744 CDS CP003496.2 1726234 1725971 -1 - 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229908.peg.1745 CDS CP003496.2 1726502 1728079 2 + 1578 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229908.peg.1746 CDS CP003496.2 1728157 1729089 1 + 933 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229908.peg.1747 CDS CP003496.2 1729089 1729331 3 + 243 putative ORF-4 - none -
fig|6666666.229908.peg.1748 CDS CP003496.2 1729315 1729563 1 + 249 FIG01055344: hypothetical protein - none -
fig|6666666.229908.peg.1749 CDS CP003496.2 1729649 1732423 2 + 2775 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229908.peg.1750 CDS CP003496.2 1732504 1732998 1 + 495 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229908.peg.1751 CDS CP003496.2 1732998 1733942 3 + 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229908.peg.1752 CDS CP003496.2 1734533 1734378 -2 - 156 hypothetical protein - none -
fig|6666666.229908.peg.1753 CDS CP003496.2 1734535 1734864 1 + 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229908.peg.1754 CDS CP003496.2 1734890 1735570 2 + 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229908.peg.1755 CDS CP003496.2 1735609 1735932 1 + 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229908.peg.1756 CDS CP003496.2 1735932 1737101 3 + 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229908.peg.1757 CDS CP003496.2 1737200 1737856 2 + 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229908.peg.1758 CDS CP003496.2 1737876 1739108 3 + 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229908.peg.1759 CDS CP003496.2 1739419 1740465 1 + 1047 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229908.peg.1760 CDS CP003496.2 1741193 1740552 -2 - 642 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229908.peg.1761 CDS CP003496.2 1742605 1741202 -1 - 1404 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229908.peg.1762 CDS CP003496.2 1743462 1742617 -3 - 846 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229908.peg.1763 CDS CP003496.2 1744418 1743474 -2 - 945 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229908.peg.1764 CDS CP003496.2 1745465 1744473 -2 - 993 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229908.peg.1765 CDS CP003496.2 1746178 1746861 1 + 684 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229908.peg.1766 CDS CP003496.2 1746873 1747478 3 + 606 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229908.peg.1767 CDS CP003496.2 1747502 1749877 2 + 2376 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229908.peg.1768 CDS CP003496.2 1749892 1750647 1 + 756 Hexuronate utilization operon transcriptional repressor ExuR D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229908.peg.1769 CDS CP003496.2 1750667 1751851 2 + 1185 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229908.peg.1770 CDS CP003496.2 1751877 1752812 3 + 936 hypothetical protein - none -
fig|6666666.229908.peg.1771 CDS CP003496.2 1752869 1753759 2 + 891 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229908.peg.1772 CDS CP003496.2 1755539 1753785 -2 - 1755 Putative sulfate permease - none -
fig|6666666.229908.peg.1773 CDS CP003496.2 1755976 1758393 1 + 2418 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229908.peg.1774 CDS CP003496.2 1758520 1760367 1 + 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229908.peg.1775 CDS CP003496.2 1760502 1761128 3 + 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229908.peg.1776 CDS CP003496.2 1761252 1762505 3 + 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229908.peg.1777 CDS CP003496.2 1762639 1762502 -1 - 138 hypothetical protein - none -
fig|6666666.229908.peg.1778 CDS CP003496.2 1762625 1763329 2 + 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229908.peg.1779 CDS CP003496.2 1763787 1763335 -3 - 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229908.peg.1780 CDS CP003496.2 1764454 1763840 -1 - 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229908.peg.1781 CDS CP003496.2 1765742 1764465 -2 - 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229908.peg.1782 CDS CP003496.2 1766867 1765764 -2 - 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229908.peg.1783 CDS CP003496.2 1767934 1766879 -1 - 1056 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229908.peg.1784 CDS CP003496.2 1768068 1767955 -3 - 114 hypothetical protein - none -
fig|6666666.229908.peg.1785 CDS CP003496.2 1768629 1768078 -3 - 552 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229908.peg.1786 CDS CP003496.2 1769790 1768651 -3 - 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229908.peg.1787 CDS CP003496.2 1769917 1770030 1 + 114 hypothetical protein - none -
fig|6666666.229908.peg.1788 CDS CP003496.2 1770085 1771134 1 + 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229908.peg.1789 CDS CP003496.2 1772600 1771236 -2 - 1365 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229908.peg.1790 CDS CP003496.2 1773934 1772693 -1 - 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229908.peg.1791 CDS CP003496.2 1774591 1774091 -1 - 501 Protein sprT - none -
fig|6666666.229908.peg.1792 CDS CP003496.2 1775138 1774686 -2 - 453 Mobile element protein - none -
fig|6666666.229908.peg.1793 CDS CP003496.2 1775406 1775233 -3 - 174 hypothetical protein - none -
fig|6666666.229908.peg.1794 CDS CP003496.2 1775608 1775474 -1 - 135 hypothetical protein - none -
fig|6666666.229908.peg.1795 CDS CP003496.2 1775949 1777307 3 + 1359 hypothetical protein - none -
fig|6666666.229908.peg.1796 CDS CP003496.2 1777297 1778574 1 + 1278 hypothetical protein - none -
fig|6666666.229908.peg.1797 CDS CP003496.2 1778576 1779331 2 + 756 hypothetical protein - none -
fig|6666666.229908.peg.1798 CDS CP003496.2 1779328 1780389 1 + 1062 hypothetical protein - none -
fig|6666666.229908.peg.1799 CDS CP003496.2 1780901 1781380 2 + 480 hypothetical protein - none -
fig|6666666.229908.peg.1800 CDS CP003496.2 1781841 1781996 3 + 156 hypothetical protein - none -
fig|6666666.229908.peg.1801 CDS CP003496.2 1781989 1784253 1 + 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229908.peg.1802 CDS CP003496.2 1784397 1785041 3 + 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229908.peg.1803 CDS CP003496.2 1785452 1786243 2 + 792 putative lipoprotein - none -
fig|6666666.229908.peg.1804 CDS CP003496.2 1787272 1786445 -1 - 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229908.peg.1805 CDS CP003496.2 1787367 1787810 3 + 444 FIG00904084: hypothetical protein - none -
fig|6666666.229908.peg.1806 CDS CP003496.2 1788496 1787900 -1 - 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.1807 CDS CP003496.2 1788593 1788946 2 + 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229908.peg.1808 CDS CP003496.2 1788967 1790397 1 + 1431 Transglycosylase, Slt family - none -
fig|6666666.229908.peg.1809 CDS CP003496.2 1790408 1790554 2 + 147 hypothetical protein - none -
fig|6666666.229908.peg.1810 CDS CP003496.2 1791136 1790597 -1 - 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229908.peg.1811 CDS CP003496.2 1792704 1791160 -3 - 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229908.peg.1812 CDS CP003496.2 1792899 1793630 3 + 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229908.peg.1813 CDS CP003496.2 1794965 1793751 -2 - 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229908.peg.1814 CDS CP003496.2 1795082 1796383 2 + 1302 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229908.peg.1815 CDS CP003496.2 1796374 1798080 1 + 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229908.peg.1816 CDS CP003496.2 1798133 1798882 2 + 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229908.peg.1817 CDS CP003496.2 1798978 1799247 1 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229908.peg.1818 CDS CP003496.2 1799455 1800609 1 + 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229908.peg.1819 CDS CP003496.2 1801212 1800760 -3 - 453 Mobile element protein - none -
fig|6666666.229908.peg.1820 CDS CP003496.2 1801352 1801206 -2 - 147 Mobile element protein - none -
fig|6666666.229908.peg.1821 CDS CP003496.2 1801678 1801505 -1 - 174 hypothetical protein - none -
fig|6666666.229908.peg.1822 CDS CP003496.2 1801880 1801746 -2 - 135 hypothetical protein - none -
fig|6666666.229908.peg.1823 CDS CP003496.2 1803136 1802201 -1 - 936 hypothetical protein - none -
fig|6666666.229908.peg.1824 CDS CP003496.2 1805668 1803149 -1 - 2520 hypothetical protein - none -
fig|6666666.229908.peg.1825 CDS CP003496.2 1806100 1805765 -1 - 336 hypothetical protein - none -
fig|6666666.229908.peg.1826 CDS CP003496.2 1806477 1806142 -3 - 336 hypothetical protein - none -
fig|6666666.229908.peg.1827 CDS CP003496.2 1807343 1806495 -2 - 849 hypothetical protein - none -
fig|6666666.229908.peg.1828 CDS CP003496.2 1807559 1808260 2 + 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229908.peg.1829 CDS CP003496.2 1808265 1809458 3 + 1194 Bicyclomycin resistance protein - none -
fig|6666666.229908.peg.1830 CDS CP003496.2 1809630 1810265 3 + 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229908.peg.1831 CDS CP003496.2 1810270 1810935 1 + 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229908.peg.1832 CDS CP003496.2 1810946 1811683 2 + 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229908.peg.1833 CDS CP003496.2 1811734 1811907 1 + 174 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229908.peg.1834 CDS CP003496.2 1811904 1812422 3 + 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229908.peg.1835 CDS CP003496.2 1812422 1814380 2 + 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229908.peg.1836 CDS CP003496.2 1814409 1814954 3 + 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229908.peg.1837 CDS CP003496.2 1814954 1815505 2 + 552 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229908.peg.1838 CDS CP003496.2 1815505 1816428 1 + 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229908.peg.1839 CDS CP003496.2 1816560 1817186 3 + 627 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229908.peg.1840 CDS CP003496.2 1817204 1817494 2 + 291 hypothetical protein - none -
fig|6666666.229908.peg.1841 CDS CP003496.2 1818071 1819594 2 + 1524 Cytochrome c552 precursor (EC 1.7.2.2) Nitrate and nitrite ammonification;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229908.peg.1842 CDS CP003496.2 1819668 1820333 3 + 666 Cytochrome c-type protein NrfB precursor Nitrate and nitrite ammonification
fig|6666666.229908.peg.1843 CDS CP003496.2 1820384 1821007 2 + 624 NrfC protein Nitrate and nitrite ammonification
fig|6666666.229908.peg.1844 CDS CP003496.2 1821046 1821969 1 + 924 NrfD protein Nitrate and nitrite ammonification
fig|6666666.229908.peg.1845 CDS CP003496.2 1822419 1822201 -3 - 219 hypothetical protein - none -
fig|6666666.229908.peg.1846 CDS CP003496.2 1822558 1824468 1 + 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly Nitrate and nitrite ammonification
fig|6666666.229908.peg.1847 CDS CP003496.2 1824461 1824991 2 + 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly Nitrate and nitrite ammonification
fig|6666666.229908.peg.1848 CDS CP003496.2 1824988 1826037 1 + 1050 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly Nitrate and nitrite ammonification
fig|6666666.229908.peg.1849 CDS CP003496.2 1826034 1827230 3 + 1197 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229908.peg.1850 CDS CP003496.2 1827963 1827388 -3 - 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229908.peg.1851 CDS CP003496.2 1828151 1828906 2 + 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229908.peg.1852 CDS CP003496.2 1830029 1828953 -2 - 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229908.peg.1853 CDS CP003496.2 1831133 1830033 -2 - 1101 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229908.peg.1854 CDS CP003496.2 1832505 1831144 -3 - 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229908.peg.1855 CDS CP003496.2 1832591 1832728 2 + 138 hypothetical protein - none -
fig|6666666.229908.peg.1856 CDS CP003496.2 1832923 1833057 1 + 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229908.peg.1857 CDS CP003496.2 1833103 1833438 1 + 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229908.peg.1858 CDS CP003496.2 1833393 1833656 3 + 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229908.peg.1859 CDS CP003496.2 1833677 1835287 2 + 1611 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229908.peg.1860 CDS CP003496.2 1835416 1836771 1 + 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229908.peg.1861 CDS CP003496.2 1837783 1836875 -1 - 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases;
tRNA modification Archaea
fig|6666666.229908.peg.1862 CDS CP003496.2 1838460 1837780 -3 - 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229908.peg.1863 CDS CP003496.2 1839489 1838467 -3 - 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229908.peg.1864 CDS CP003496.2 1841296 1839500 -1 - 1797 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229908.peg.1865 CDS CP003496.2 1841843 1841460 -2 - 384 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229908.peg.1866 CDS CP003496.2 1842129 1842797 3 + 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229908.peg.1867 CDS CP003496.2 1842819 1843598 3 + 780 UPF0246 protein YaaA - none -
fig|6666666.229908.peg.1868 CDS CP003496.2 1843600 1844166 1 + 567 FIG00696199: hypothetical protein - none -
fig|6666666.229908.peg.1869 CDS CP003496.2 1844166 1845086 3 + 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229908.peg.1870 CDS CP003496.2 1845148 1846113 1 + 966 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229908.peg.1871 CDS CP003496.2 1846374 1846213 -3 - 162 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229908.peg.1872 CDS CP003496.2 1847390 1846458 -2 - 933 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229908.peg.1873 CDS CP003496.2 1848438 1847392 -3 - 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229908.peg.1874 CDS CP003496.2 1848793 1848440 -1 - 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229908.peg.1875 CDS CP003496.2 1849144 1848794 -1 - 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229908.peg.1876 CDS CP003496.2 1849487 1850308 2 + 822 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229908.peg.1877 CDS CP003496.2 1850407 1852719 1 + 2313 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229908.peg.1878 CDS CP003496.2 1852865 1853605 2 + 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229908.peg.1879 CDS CP003496.2 1853747 1854610 2 + 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229908.peg.1880 CDS CP003496.2 1856095 1854683 -1 - 1413 Putative cell division protein precursor - none -
fig|6666666.229908.peg.1881 CDS CP003496.2 1856846 1856103 -2 - 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.1882 CDS CP003496.2 1856957 1857688 2 + 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229908.peg.1883 CDS CP003496.2 1857681 1858187 3 + 507 Arabinose efflux permease - none -
fig|6666666.229908.peg.1884 CDS CP003496.2 1858250 1858927 2 + 678 YheO-like PAS domain - none -
fig|6666666.229908.peg.1885 CDS CP003496.2 1860207 1858993 -3 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229908.peg.1886 CDS CP003496.2 1861745 1860369 -2 - 1377 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229908.peg.1887 CDS CP003496.2 1862597 1862076 -2 - 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229908.peg.1888 CDS CP003496.2 1862662 1863693 1 + 1032 Lysyl-lysine 2,3-aminomutase Translation elongation factor P lysylation
fig|6666666.229908.peg.1889 CDS CP003496.2 1863865 1865187 1 + 1323 Cell envelope opacity-associated protein A - none -
fig|6666666.229908.peg.1890 CDS CP003496.2 1865249 1865623 2 + 375 opacity associated protein - none -
fig|6666666.229908.peg.1891 CDS CP003496.2 1866619 1865714 -1 - 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229908.peg.1892 CDS CP003496.2 1866682 1867122 1 + 441 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229908.peg.1893 CDS CP003496.2 1867125 1868018 3 + 894 Tyrosine recombinase XerD - none -
fig|6666666.229908.peg.1894 CDS CP003496.2 1868182 1869480 1 + 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229908.peg.1895 CDS CP003496.2 1869628 1869503 -1 - 126 hypothetical protein - none -
fig|6666666.229908.peg.1896 CDS CP003496.2 1870545 1869658 -3 - 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229908.peg.1897 CDS CP003496.2 1871798 1870545 -2 - 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229908.peg.1898 CDS CP003496.2 1872613 1871894 -1 - 720 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229908.peg.1899 CDS CP003496.2 1873946 1872672 -2 - 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229908.peg.1900 CDS CP003496.2 1874442 1874002 -3 - 441 hypothetical protein - none -
fig|6666666.229908.peg.1901 CDS CP003496.2 1875414 1874470 -3 - 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229908.peg.1902 CDS CP003496.2 1877874 1875427 -3 - 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229908.peg.1903 CDS CP003496.2 1878094 1877963 -1 - 132 hypothetical protein - none -
fig|6666666.229908.peg.1904 CDS CP003496.2 1878233 1879621 2 + 1389 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229908.peg.1905 CDS CP003496.2 1879614 1880309 3 + 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229908.peg.1906 CDS CP003496.2 1881198 1880362 -3 - 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229908.peg.1907 CDS CP003496.2 1883024 1881513 -2 - 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229908.peg.1908 CDS CP003496.2 1884163 1883159 -1 - 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229908.peg.1909 CDS CP003496.2 1885169 1884276 -2 - 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229908.peg.1910 CDS CP003496.2 1885327 1885791 1 + 465 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229908.peg.1911 CDS CP003496.2 1888635 1885855 -3 - 2781 TolA protein Ton and Tol transport systems
fig|6666666.229908.peg.1912 CDS CP003496.2 1888751 1888864 2 + 114 hypothetical protein - none -
fig|6666666.229908.peg.1913 CDS CP003496.2 1890714 1888861 -3 - 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229908.peg.1914 CDS CP003496.2 1891101 1892510 3 + 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229908.peg.1915 CDS CP003496.2 1893344 1892619 -2 - 726 Integral membrane protein TerC - none -
fig|6666666.229908.peg.1916 CDS CP003496.2 1894077 1893409 -3 - 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229908.peg.1917 CDS CP003496.2 1894613 1894074 -2 - 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229908.peg.1918 CDS CP003496.2 1896120 1894690 -3 - 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229908.peg.1919 CDS CP003496.2 1896324 1896614 3 + 291 FIG00696346: hypothetical protein - none -
fig|6666666.229908.peg.1920 CDS CP003496.2 1897953 1896676 -3 - 1278 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229908.peg.1921 CDS CP003496.2 1898227 1897970 -1 - 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229908.peg.1922 CDS CP003496.2 1898496 1898227 -3 - 270 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229908.peg.1923 CDS CP003496.2 1899231 1898590 -3 - 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229908.peg.1924 CDS CP003496.2 1899769 1899260 -1 - 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229908.peg.1925 CDS CP003496.2 1900577 1899792 -2 - 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229908.peg.1926 CDS CP003496.2 1901368 1900571 -1 - 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229908.peg.1927 CDS CP003496.2 1901538 1901654 3 + 117 hypothetical protein - none -
fig|6666666.229908.peg.1928 CDS CP003496.2 1901651 1902226 2 + 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229908.peg.1929 CDS CP003496.2 1902207 1902725 3 + 519 LptA, protein essential for LPS transport across the periplasm KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229908.peg.1930 CDS CP003496.2 1902731 1903456 2 + 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229908.peg.1931 CDS CP003496.2 1903460 1903993 2 + 534 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229908.peg.1932 CDS CP003496.2 1904021 1904875 2 + 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229908.peg.1933 CDS CP003496.2 1906215 1904881 -3 - 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229908.peg.1934 CDS CP003496.2 1907415 1906222 -3 - 1194 FIG074102: hypothetical protein - none -
fig|6666666.229908.peg.1935 CDS CP003496.2 1907741 1907448 -2 - 294 UPF0125 protein yfjF - none -
fig|6666666.229908.peg.1936 CDS CP003496.2 1908114 1907734 -3 - 381 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229908.peg.1937 CDS CP003496.2 1908235 1908651 1 + 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229908.peg.1938 CDS CP003496.2 1909086 1909211 3 + 126 hypothetical protein - none -
fig|6666666.229908.peg.1939 CDS CP003496.2 1910001 1909189 -3 - 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229908.peg.1940 CDS CP003496.2 1911148 1910129 -1 - 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229908.peg.1941 CDS CP003496.2 1912018 1911248 -1 - 771 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway - none -
fig|6666666.229908.peg.1942 CDS CP003496.2 1913136 1912018 -3 - 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229908.peg.1943 CDS CP003496.2 1913206 1913331 1 + 126 hypothetical protein - none -
fig|6666666.229908.peg.1944 CDS CP003496.2 1914887 1913514 -2 - 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229908.peg.1945 CDS CP003496.2 1915045 1916052 1 + 1008 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229908.peg.1946 CDS CP003496.2 1917121 1916315 -1 - 807 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229908.peg.1947 CDS CP003496.2 1917136 1917252 1 + 117 hypothetical protein - none -
fig|6666666.229908.peg.1948 CDS CP003496.2 1917333 1917992 3 + 660 putative membrane protein - none -
fig|6666666.229908.peg.1949 CDS CP003496.2 1918122 1918694 3 + 573 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.229908.peg.1950 CDS CP003496.2 1922052 1919932 -3 - 2121 unknown - none -
fig|6666666.229908.peg.1951 CDS CP003496.2 1923377 1922331 -2 - 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229908.peg.1952 CDS CP003496.2 1925450 1923393 -2 - 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229908.peg.1953 CDS CP003496.2 1926230 1925478 -2 - 753 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229908.peg.1954 CDS CP003496.2 1927723 1926683 -1 - 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229908.peg.1955 CDS CP003496.2 1928032 1928682 1 + 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229908.peg.1956 CDS CP003496.2 1928692 1929276 1 + 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229908.peg.1957 CDS CP003496.2 1929277 1930479 1 + 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229908.peg.1958 CDS CP003496.2 1930481 1931677 2 + 1197 Sugar efflux transporter SotB - none -
fig|6666666.229908.peg.1959 CDS CP003496.2 1933279 1931747 -1 - 1533 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229908.peg.1960 CDS CP003496.2 1933567 1934550 1 + 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229908.peg.1961 CDS CP003496.2 1934573 1934863 2 + 291 hypothetical protein - none -
fig|6666666.229908.peg.1962 CDS CP003496.2 1936226 1934928 -2 - 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229908.peg.1963 CDS CP003496.2 1937279 1936314 -2 - 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229908.peg.1964 CDS CP003496.2 1938813 1937293 -3 - 1521 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229908.peg.1965 CDS CP003496.2 1938953 1940428 2 + 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229908.peg.1966 CDS CP003496.2 1940545 1941192 1 + 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229908.peg.1967 CDS CP003496.2 1941208 1941906 1 + 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229908.peg.1968 CDS CP003496.2 1943736 1943179 -3 - 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.1969 CDS CP003496.2 1943991 1945181 3 + 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229908.peg.1970 CDS CP003496.2 1945395 1946447 3 + 1053 Outer membrane protein P2 precursor (OMP P2) - none -
fig|6666666.229908.peg.1971 CDS CP003496.2 1946592 1946849 3 + 258 hypothetical protein - none -
fig|6666666.229908.peg.1972 CDS CP003496.2 1946849 1947196 2 + 348 Programmed cell death toxin ChpB - none -
fig|6666666.229908.peg.1973 CDS CP003496.2 1948401 1947274 -3 - 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229908.peg.1974 CDS CP003496.2 1950741 1948840 -3 - 1902 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229908.peg.1975 CDS CP003496.2 1951030 1951155 1 + 126 hypothetical protein - none -
fig|6666666.229908.peg.1976 CDS CP003496.2 1951127 1952464 2 + 1338 GTP-binding protein - none -
fig|6666666.229908.peg.1977 CDS CP003496.2 1952799 1952551 -3 - 249 Mobile element protein - none -
fig|6666666.229908.peg.1978 CDS CP003496.2 1953026 1952841 -2 - 186 Mobile element protein - none -
fig|6666666.229908.peg.1979 CDS CP003496.2 1953505 1954239 1 + 735 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229908.peg.1980 CDS CP003496.2 1954208 1955011 2 + 804 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229908.peg.1981 CDS CP003496.2 1955014 1955628 1 + 615 ABC transporter ATP-binding protein - none -
fig|6666666.229908.peg.1982 CDS CP003496.2 1955625 1956485 3 + 861 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229908.peg.1983 CDS CP003496.2 1956782 1958230 2 + 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229908.peg.1984 CDS CP003496.2 1958296 1964067 1 + 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229908.peg.1985 CDS CP003496.2 1964507 1965250 2 + 744 Putative membrane protein YeiH - none -
fig|6666666.229908.peg.1986 CDS CP003496.2 1965370 1967727 1 + 2358 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229908.peg.1987 CDS CP003496.2 1967892 1968062 3 + 171 hypothetical protein - none -
fig|6666666.229908.peg.1988 CDS CP003496.2 1968059 1968694 2 + 636 VgrG-3 protein - none -
fig|6666666.229908.peg.1989 CDS CP003496.2 1968654 1969739 3 + 1086 VgrG-3 protein - none -
fig|6666666.229908.peg.1990 CDS CP003496.2 1969786 1969968 1 + 183 VgrG-3 protein - none -
fig|6666666.229908.peg.1991 CDS CP003496.2 1970305 1970919 1 + 615 hypothetical protein - none -
fig|6666666.229908.peg.1992 CDS CP003496.2 1970936 1971106 2 + 171 hypothetical protein - none -
fig|6666666.229908.peg.1993 CDS CP003496.2 1971143 1971793 2 + 651 hypothetical protein - none -
fig|6666666.229908.peg.1994 CDS CP003496.2 1972384 1973001 1 + 618 hypothetical protein - none -
fig|6666666.229908.peg.1995 CDS CP003496.2 1973569 1973838 1 + 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229908.peg.1996 CDS CP003496.2 1973855 1975210 2 + 1356 FIG00732228: membrane protein - none -
fig|6666666.229908.peg.1997 CDS CP003496.2 1975220 1976044 2 + 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229908.peg.1998 CDS CP003496.2 1976034 1976978 3 + 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229908.peg.1999 CDS CP003496.2 1978095 1977145 -3 - 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p YrdC-YciO-Sua5 protein family
fig|6666666.229908.peg.2000 CDS CP003496.2 1978158 1978664 3 + 507 FIG001674: hypothetical protein - none -
fig|6666666.229908.peg.2001 CDS CP003496.2 1980802 1978661 -1 - 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229908.peg.2002 CDS CP003496.2 1981284 1980811 -3 - 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229908.peg.2003 CDS CP003496.2 1981742 1981284 -2 - 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229908.peg.2004 CDS CP003496.2 1982485 1981805 -1 - 681 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229908.peg.2005 CDS CP003496.2 1982630 1982902 2 + 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229908.peg.2006 CDS CP003496.2 1983725 1982877 -2 - 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229908.peg.2007 CDS CP003496.2 1984579 1983722 -1 - 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229908.peg.2008 CDS CP003496.2 1985469 1984579 -3 - 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229908.peg.2009 CDS CP003496.2 1986350 1985469 -2 - 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229908.peg.2010 CDS CP003496.2 1986777 1986448 -3 - 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) CBSS-326442.4.peg.1852;
Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229908.peg.2011 CDS CP003496.2 1987525 1986863 -1 - 663 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229908.peg.2012 CDS CP003496.2 1987841 1988275 2 + 435 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229908.peg.2013 CDS CP003496.2 1988388 1990091 3 + 1704 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229908.peg.2014 CDS CP003496.2 1990228 1993104 1 + 2877 helicase (Snf2/Rad54 family) - none -
fig|6666666.229908.peg.2015 CDS CP003496.2 1993712 1994653 2 + 942 FIG00807791: hypothetical protein - none -
fig|6666666.229908.peg.2016 CDS CP003496.2 1994667 1996403 3 + 1737 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229908.peg.2017 CDS CP003496.2 1996403 1996546 2 + 144 hypothetical protein - none -
fig|6666666.229908.peg.2018 CDS CP003496.2 1996530 1997564 3 + 1035 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229908.peg.2019 CDS CP003496.2 1997561 2000278 2 + 2718 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229908.peg.2020 CDS CP003496.2 2000393 2001067 2 + 675 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229908.peg.2021 CDS CP003496.2 2001064 2002461 1 + 1398 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229908.peg.2022 CDS CP003496.2 2002458 2002841 3 + 384 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229908.peg.2023 CDS CP003496.2 2002854 2003720 3 + 867 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229908.peg.2024 CDS CP003496.2 2003865 2004515 3 + 651 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229908.peg.2025 CDS CP003496.2 2004581 2005285 2 + 705 hypothetical protein - none -
fig|6666666.229908.peg.2026 CDS CP003496.2 2005609 2005764 1 + 156 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229908.peg.2027 CDS CP003496.2 2006787 2007167 3 + 381 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229908.peg.2028 CDS CP003496.2 2007189 2008193 3 + 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229908.peg.2029 CDS CP003496.2 2008202 2009830 2 + 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229908.peg.2030 CDS CP003496.2 2009814 2010461 3 + 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229908.peg.2031 CDS CP003496.2 2010507 2011511 3 + 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229908.peg.2032 CDS CP003496.2 2012112 2011939 -3 - 174 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229908.peg.2033 CDS CP003496.2 2012226 2012705 3 + 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229908.peg.2034 CDS CP003496.2 2012709 2015453 3 + 2745 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229908.peg.2035 CDS CP003496.2 2015546 2016163 2 + 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229908.peg.2036 CDS CP003496.2 2016176 2017516 2 + 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229908.peg.2037 CDS CP003496.2 2019680 2018013 -2 - 1668 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229908.peg.2038 CDS CP003496.2 2019987 2021303 3 + 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229908.peg.2039 CDS CP003496.2 2022279 2021383 -3 - 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229908.peg.2040 CDS CP003496.2 2023500 2022403 -3 - 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229908.peg.2041 CDS CP003496.2 2024404 2023631 -1 - 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229908.peg.2042 CDS CP003496.2 2025264 2024404 -3 - 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229908.peg.2043 CDS CP003496.2 2026366 2025248 -1 - 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229908.peg.2044 CDS CP003496.2 2026630 2027874 1 + 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229908.peg.2045 CDS CP003496.2 2030606 2027949 -2 - 2658 Paraquat-inducible protein B Oxidative stress
fig|6666666.229908.peg.2046 CDS CP003496.2 2031852 2030569 -3 - 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229908.peg.2047 CDS CP003496.2 2032070 2032681 2 + 612 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229908.peg.2048 CDS CP003496.2 2032755 2034812 3 + 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229908.peg.2049 CDS CP003496.2 2034890 2036398 2 + 1509 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229908.peg.2050 CDS CP003496.2 2036463 2037023 3 + 561 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229908.peg.2051 CDS CP003496.2 2037100 2037738 1 + 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229908.peg.2052 CDS CP003496.2 2037932 2037810 -2 - 123 hypothetical protein - none -
fig|6666666.229908.peg.2053 CDS CP003496.2 2038017 2040824 3 + 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229908.peg.2054 CDS CP003496.2 2040950 2042173 2 + 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229908.peg.2055 CDS CP003496.2 2042163 2042315 3 + 153 hypothetical protein - none -
fig|6666666.229908.peg.2056 CDS CP003496.2 2042359 2043528 1 + 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229908.peg.2057 CDS CP003496.2 2043539 2044411 2 + 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229908.peg.2058 CDS CP003496.2 2044444 2045736 1 + 1293 hypothetical protein - none -
fig|6666666.229908.peg.2060 CDS CP003496.2 2049000 2046778 -3 - 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229908.peg.2062 CDS CP003496.2 2050326 2049133 -3 - 1194 cell filamentation protein Fic-related protein - none -
fig|6666666.229908.peg.2063 CDS CP003496.2 2050915 2050454 -1 - 462 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) Hydrogenases
fig|6666666.229908.peg.2064 CDS CP003496.2 2051309 2050905 -2 - 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229908.peg.2065 CDS CP003496.2 2052167 2051391 -2 - 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229908.peg.2066 CDS CP003496.2 2052811 2052164 -1 - 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229908.peg.2067 CDS CP003496.2 2054555 2052825 -2 - 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229908.peg.2068 CDS CP003496.2 2056113 2054575 -3 - 1539 Hydrogenase-4 component F - none -
fig|6666666.229908.peg.2069 CDS CP003496.2 2056756 2056118 -1 - 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229908.peg.2070 CDS CP003496.2 2058212 2056767 -2 - 1446 Hydrogenase-4 component D (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229908.peg.2071 CDS CP003496.2 2059190 2058225 -2 - 966 Hydrogenase-4 component C (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229908.peg.2072 CDS CP003496.2 2061219 2059198 -3 - 2022 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229908.peg.2073 CDS CP003496.2 2061852 2061253 -3 - 600 Hydrogenase-4 component A - none -
fig|6666666.229908.peg.2074 CDS CP003496.2 2062145 2064430 2 + 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229908.peg.2075 CDS CP003496.2 2064901 2064785 -1 - 117 hypothetical protein - none -
fig|6666666.229908.peg.2076 CDS CP003496.2 2065764 2065051 -3 - 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229908.peg.2077 CDS CP003496.2 2066587 2065757 -1 - 831 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229908.peg.2078 CDS CP003496.2 2069795 2066685 -2 - 3111 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229908.peg.2079 CDS CP003496.2 2070016 2070840 1 + 825 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229908.peg.2080 CDS CP003496.2 2070889 2071887 1 + 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229908.peg.2081 CDS CP003496.2 2071838 2071960 2 + 123 hypothetical protein - none -
fig|6666666.229908.peg.2082 CDS CP003496.2 2072475 2071957 -3 - 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229908.peg.2083 CDS CP003496.2 2072693 2074042 2 + 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229908.peg.2084 CDS CP003496.2 2074215 2076389 3 + 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229908.peg.2085 CDS CP003496.2 2077348 2076521 -1 - 828 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229908.peg.2086 CDS CP003496.2 2077552 2077391 -1 - 162 hypothetical protein - none -
fig|6666666.229908.peg.2087 CDS CP003496.2 2078268 2077525 -3 - 744 Probable transmembrane protein - none -
fig|6666666.229908.peg.2088 CDS CP003496.2 2078535 2078281 -3 - 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.2089 CDS CP003496.2 2078702 2078532 -2 - 171 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.2090 CDS CP003496.2 2079848 2078892 -2 - 957 Polysaccharide polymerization protein - none -
fig|6666666.229908.peg.2091 CDS CP003496.2 2081308 2079845 -1 - 1464 putative flippase - none -
fig|6666666.229908.peg.2092 CDS CP003496.2 2081499 2082275 3 + 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229908.peg.2093 CDS CP003496.2 2082284 2083474 2 + 1191 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase - none -
fig|6666666.229908.peg.2094 CDS CP003496.2 2083474 2084355 1 + 882 Glycosyltransferase - none -
fig|6666666.229908.peg.2095 CDS CP003496.2 2084448 2085233 3 + 786 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229908.peg.2096 CDS CP003496.2 2085368 2085222 -2 - 147 hypothetical protein - none -
fig|6666666.229908.peg.2097 CDS CP003496.2 2085340 2086377 1 + 1038 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229908.peg.2098 CDS CP003496.2 2086395 2087198 3 + 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229908.peg.2099 CDS CP003496.2 2087198 2087986 2 + 789 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase - none -
fig|6666666.229908.peg.2100 CDS CP003496.2 2088011 2089039 2 + 1029 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) - none -
fig|6666666.229908.peg.2101 CDS CP003496.2 2089941 2089201 -3 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229908.peg.2102 CDS CP003496.2 2090869 2090216 -1 - 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229908.peg.2103 CDS CP003496.2 2090952 2091686 3 + 735 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229908.peg.2104 CDS CP003496.2 2091737 2092651 2 + 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229908.peg.2105 CDS CP003496.2 2092944 2092708 -3 - 237 Putative lipoprotein yceB precursor - none -
fig|6666666.229908.peg.2106 CDS CP003496.2 2093293 2092967 -1 - 327 Putative lipoprotein yceB precursor - none -
fig|6666666.229908.peg.2107 CDS CP003496.2 2093495 2094016 2 + 522 unknown - none -
fig|6666666.229908.peg.2108 CDS CP003496.2 2094037 2094822 1 + 786 serine/threonine protein kinase - none -
fig|6666666.229908.peg.2109 CDS CP003496.2 2094819 2094947 3 + 129 hypothetical protein - none -
fig|6666666.229908.peg.2110 CDS CP003496.2 2095963 2095031 -1 - 933 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.229908.peg.2111 CDS CP003496.2 2097947 2096214 -2 - 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229908.peg.2112 CDS CP003496.2 2099803 2097947 -1 - 1857 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229908.peg.2113 CDS CP003496.2 2100769 2099816 -1 - 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229908.peg.2114 CDS CP003496.2 2101686 2100829 -3 - 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229908.peg.2115 CDS CP003496.2 2103137 2102406 -2 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229908.peg.2116 CDS CP003496.2 2104367 2103153 -2 - 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229908.peg.2117 CDS CP003496.2 2104496 2105152 2 + 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229908.peg.2118 CDS CP003496.2 2106695 2105253 -2 - 1443 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229908.peg.2119 CDS CP003496.2 2106855 2107331 3 + 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229908.peg.2120 CDS CP003496.2 2107709 2107407 -2 - 303 FIG004454: RNA binding protein - none -
fig|6666666.229908.peg.2121 CDS CP003496.2 2107877 2108176 2 + 300 Phage-related protein - none -
fig|6666666.229908.peg.2122 CDS CP003496.2 2108173 2108469 1 + 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229908.peg.2123 CDS CP003496.2 2109116 2108502 -2 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229908.peg.2124 CDS CP003496.2 2109143 2110540 2 + 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229908.peg.2125 CDS CP003496.2 2110812 2112950 3 + 2139 Ferrichrome-iron receptor - none -
fig|6666666.229908.peg.2126 CDS CP003496.2 2113004 2114749 2 + 1746 Ferrichrome-iron receptor - none -
fig|6666666.229908.peg.2127 CDS CP003496.2 2115342 2114863 -3 - 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229908.peg.2128 CDS CP003496.2 2115403 2116374 1 + 972 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229908.peg.2129 CDS CP003496.2 2118713 2116980 -2 - 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229908.peg.2130 CDS CP003496.2 2118810 2119397 3 + 588 Protein yecM - none -
fig|6666666.229908.peg.2131 CDS CP003496.2 2119439 2119894 2 + 456 Outer membrane lipoprotein - none -
fig|6666666.229908.peg.2132 CDS CP003496.2 2120035 2121117 1 + 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229908.peg.2133 CDS CP003496.2 2121157 2122056 1 + 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229908.peg.2134 CDS CP003496.2 2122066 2122920 1 + 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation;
KDO2-Lipid A biosynthesis
fig|6666666.229908.peg.2135 CDS CP003496.2 2123100 2123609 3 + 510 probable lipoprotein NlpC - none -
fig|6666666.229908.peg.2136 CDS CP003496.2 2124258 2124007 -3 - 252 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229908.peg.2137 CDS CP003496.2 2124342 2125004 3 + 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229908.peg.2138 CDS CP003496.2 2125571 2125026 -2 - 546 FIG00696317: hypothetical protein - none -
fig|6666666.229908.peg.2139 CDS CP003496.2 2126262 2125795 -3 - 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229908.peg.2140 CDS CP003496.2 2127612 2126275 -3 - 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229908.peg.2141 CDS CP003496.2 2128467 2127640 -3 - 828 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229908.peg.2142 CDS CP003496.2 2128885 2128637 -1 - 249 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229908.peg.2143 CDS CP003496.2 2129719 2128889 -1 - 831 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229908.peg.2144 CDS CP003496.2 2130265 2129813 -1 - 453 Mobile element protein - none -
fig|6666666.229908.peg.2145 CDS CP003496.2 2130405 2130259 -3 - 147 Mobile element protein - none -
fig|6666666.229908.peg.2146 CDS CP003496.2 2130731 2130558 -2 - 174 hypothetical protein - none -
fig|6666666.229908.peg.2147 CDS CP003496.2 2130933 2130799 -3 - 135 hypothetical protein - none -
fig|6666666.229908.peg.2148 CDS CP003496.2 2131220 2131056 -2 - 165 hypothetical protein - none -
fig|6666666.229908.peg.2149 CDS CP003496.2 2131418 2131867 2 + 450 ImpA - none -
fig|6666666.229908.peg.2150 CDS CP003496.2 2132273 2132100 -2 - 174 hypothetical protein - none -
fig|6666666.229908.peg.2151 CDS CP003496.2 2134041 2132575 -3 - 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain Purine conversions;
Purine salvage cluster
fig|6666666.229908.peg.2152 CDS CP003496.2 2134183 2135115 1 + 933 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229908.peg.2153 CDS CP003496.2 2135202 2135405 3 + 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229908.peg.2155 CDS CP003496.2 2142061 2141243 -1 - 819 Peptide transport system ATP-binding protein SapF Peptide ABC transport system Sap
fig|6666666.229908.peg.2156 CDS CP003496.2 2143117 2142065 -1 - 1053 Peptide transport system ATP-binding protein SapD Peptide ABC transport system Sap
fig|6666666.229908.peg.2157 CDS CP003496.2 2144012 2143125 -2 - 888 Peptide transport system permease protein SapC Peptide ABC transport system Sap
fig|6666666.229908.peg.2158 CDS CP003496.2 2144967 2144002 -3 - 966 Peptide transport system permease protein SapB Peptide ABC transport system Sap
fig|6666666.229908.peg.2159 CDS CP003496.2 2146598 2144967 -2 - 1632 Peptide transport periplasmic protein SapA Peptide ABC transport system Sap
fig|6666666.229908.peg.2160 CDS CP003496.2 2146864 2148279 1 + 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229908.peg.2161 CDS CP003496.2 2148292 2149371 1 + 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229908.peg.2162 CDS CP003496.2 2149455 2150414 3 + 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229908.peg.2163 CDS CP003496.2 2150544 2150428 -3 - 117 hypothetical protein - none -
fig|6666666.229908.peg.2164 CDS CP003496.2 2150719 2150832 1 + 114 hypothetical protein - none -
fig|6666666.229908.peg.2165 CDS CP003496.2 2151088 2150792 -1 - 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229908.peg.2166 CDS CP003496.2 2152152 2151208 -3 - 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229908.peg.2167 CDS CP003496.2 2154017 2152167 -2 - 1851 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229908.peg.2168 CDS CP003496.2 2155504 2154017 -1 - 1488 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229908.peg.2169 CDS CP003496.2 2155995 2155501 -3 - 495 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229908.peg.2170 CDS CP003496.2 2155970 2156098 2 + 129 hypothetical protein - none -
fig|6666666.229908.peg.2171 CDS CP003496.2 2157944 2156151 -2 - 1794 Mlr4739 protein - none -
fig|6666666.229908.peg.2172 CDS CP003496.2 2159252 2158332 -2 - 921 RfbJ protein - none -
fig|6666666.229908.peg.2173 CDS CP003496.2 2160768 2159260 -3 - 1509 putative integral membrane protein - none -
fig|6666666.229908.peg.2174 CDS CP003496.2 2161372 2160755 -1 - 618 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229908.peg.2175 CDS CP003496.2 2162915 2161401 -2 - 1515 Dca - none -
fig|6666666.229908.peg.2176 CDS CP003496.2 2164249 2163428 -1 - 822 probable phage integrase - none -
fig|6666666.229908.peg.2177 CDS CP003496.2 2166243 2164333 -3 - 1911 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229908.peg.2178 CDS CP003496.2 2166597 2166716 3 + 120 Haemophilus-specific protein, uncharacterized - none -
fig|6666666.229908.peg.2179 CDS CP003496.2 2167030 2167209 1 + 180 hypothetical protein - none -
fig|6666666.229908.peg.2180 CDS CP003496.2 2167907 2168035 2 + 129 hypothetical protein - none -
fig|6666666.229908.peg.2181 CDS CP003496.2 2168038 2168382 1 + 345 Programmed cell death toxin MazF - none -
fig|6666666.229908.peg.2182 CDS CP003496.2 2168466 2168732 3 + 267 Virulence plasmid protein - none -
fig|6666666.229908.peg.2183 CDS CP003496.2 2168947 2169615 1 + 669 Cytolethal distending toxin subunit A Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229908.peg.2184 CDS CP003496.2 2169630 2170481 3 + 852 Cytolethal distending toxin subunit B Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229908.peg.2185 CDS CP003496.2 2170492 2171052 1 + 561 Cytolethal distending toxin subunit C Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229908.peg.2186 CDS CP003496.2 2172420 2171659 -3 - 762 DUF1526 domain-containing protein - none -
fig|6666666.229908.peg.2187 CDS CP003496.2 2173122 2173235 3 + 114 hypothetical protein - none -
fig|6666666.229908.peg.2188 CDS CP003496.2 2173470 2173793 3 + 324 FIG00696053: hypothetical protein - none -
fig|6666666.229908.peg.2189 CDS CP003496.2 2173793 2173972 2 + 180 hypothetical protein - none -
fig|6666666.229908.peg.2190 CDS CP003496.2 2174048 2174455 2 + 408 FIG00696269: hypothetical protein - none -
fig|6666666.229908.peg.2191 CDS CP003496.2 2174474 2174845 2 + 372 FIG00696467: hypothetical protein - none -
fig|6666666.229908.peg.2192 CDS CP003496.2 2174857 2175489 1 + 633 Possible exported protein - none -
fig|6666666.229908.peg.2193 CDS CP003496.2 2175489 2176349 3 + 861 FIG00698030: hypothetical protein - none -
fig|6666666.229908.peg.2194 CDS CP003496.2 2176360 2177748 1 + 1389 putative exported protein - none -
fig|6666666.229908.peg.2195 CDS CP003496.2 2177757 2178164 3 + 408 putative lipoprotein - none -
fig|6666666.229908.peg.2196 CDS CP003496.2 2179002 2178454 -3 - 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229908.peg.2197 CDS CP003496.2 2179074 2180114 3 + 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229908.peg.2198 CDS CP003496.2 2180335 2180592 1 + 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229908.peg.2199 CDS CP003496.2 2180709 2182436 3 + 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229908.peg.2200 CDS CP003496.2 2182497 2182997 3 + 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229908.peg.2201 CDS CP003496.2 2185162 2183123 -1 - 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229908.peg.2202 CDS CP003496.2 2185304 2185669 2 + 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229908.peg.2203 CDS CP003496.2 2185725 2186120 3 + 396 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229908.peg.2204 CDS CP003496.2 2186193 2187263 3 + 1071 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229908.peg.2205 CDS CP003496.2 2187652 2187524 -1 - 129 hypothetical protein - none -
fig|6666666.229908.peg.2206 CDS CP003496.2 2187882 2187697 -3 - 186 hypothetical protein - none -
fig|6666666.229908.peg.2207 CDS CP003496.2 2188873 2188025 -1 - 849 miscellaneous; hypothetical/partial homology - none -
fig|6666666.229908.peg.2208 CDS CP003496.2 2190990 2188873 -3 - 2118 Probable phospholipase protein - none -
fig|6666666.229908.peg.2209 CDS CP003496.2 2192296 2191022 -1 - 1275 VgrG-3 protein - none -
fig|6666666.229908.peg.2210 CDS CP003496.2 2192891 2192256 -2 - 636 VgrG-3 protein - none -
fig|6666666.229908.peg.2211 CDS CP003496.2 2193058 2192888 -1 - 171 hypothetical protein - none -
fig|6666666.229908.peg.2212 CDS CP003496.2 2193831 2193241 -3 - 591 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229908.peg.2213 CDS CP003496.2 2194808 2193834 -2 - 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229908.peg.2214 CDS CP003496.2 2194911 2195477 3 + 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229908.peg.2215 CDS CP003496.2 2195633 2196577 2 + 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229908.peg.2216 CDS CP003496.2 2196795 2197073 3 + 279 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229908.peg.2217 CDS CP003496.2 2198216 2197341 -2 - 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229908.peg.2218 CDS CP003496.2 2198456 2200387 2 + 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229908.peg.2219 CDS CP003496.2 2200956 2200504 -3 - 453 Mobile element protein - none -
fig|6666666.229908.peg.2220 CDS CP003496.2 2201096 2200950 -2 - 147 Mobile element protein - none -
fig|6666666.229908.peg.2221 CDS CP003496.2 2201422 2201249 -1 - 174 hypothetical protein - none -
fig|6666666.229908.peg.2222 CDS CP003496.2 2201624 2201490 -2 - 135 hypothetical protein - none -
fig|6666666.229908.peg.2223 CDS CP003496.2 2201772 2201635 -3 - 138 hypothetical protein - none -
fig|6666666.229908.peg.2224 CDS CP003496.2 2202569 2201790 -2 - 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229908.peg.2225 CDS CP003496.2 2202945 2203424 3 + 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229908.peg.2226 CDS CP003496.2 2203631 2203425 -2 - 207 hypothetical protein - none -
fig|6666666.229908.peg.2227 CDS CP003496.2 2203900 2204253 1 + 354 LSU ribosomal protein L20p - none -
fig|6666666.229908.peg.2228 CDS CP003496.2 2205139 2205020 -1 - 120 hypothetical protein - none -
fig|6666666.229908.peg.2229 CDS CP003496.2 2205230 2206183 2 + 954 Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) Lactose and Galactose Uptake and Utilization
fig|6666666.229908.peg.2230 CDS CP003496.2 2206198 2208399 1 + 2202 PTS system, galactitol-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.229908.peg.2231 CDS CP003496.2 2208422 2209402 2 + 981 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) - none -
fig|6666666.229908.peg.2232 CDS CP003496.2 2209469 2210227 2 + 759 Galactitol utilization operon repressor - none -
fig|6666666.229908.peg.2233 CDS CP003496.2 2212197 2210347 -3 - 1851 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229908.peg.2234 CDS CP003496.2 2213172 2212282 -3 - 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229908.peg.2235 CDS CP003496.2 2213428 2213183 -1 - 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229908.peg.2236 CDS CP003496.2 2213654 2214550 2 + 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229908.peg.2237 CDS CP003496.2 2214573 2215919 3 + 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229908.peg.2238 CDS CP003496.2 2216617 2215976 -1 - 642 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229908.peg.2239 CDS CP003496.2 2218136 2216679 -2 - 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229908.peg.2240 CDS CP003496.2 2219058 2218150 -3 - 909 Putative surface protein - none -
fig|6666666.229908.peg.2241 CDS CP003496.2 2219190 2219867 3 + 678 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229908.peg.2242 CDS CP003496.2 2219912 2220088 2 + 177 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229908.peg.2243 CDS CP003496.2 2220085 2220774 1 + 690 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229908.peg.2244 CDS CP003496.2 2220858 2221181 3 + 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229908.peg.2245 CDS CP003496.2 2221298 2222839 2 + 1542 Esterase/lipase - none -
fig|6666666.229908.peg.2246 CDS CP003496.2 2224467 2223094 -3 - 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229908.peg.2247 CDS CP003496.2 2226478 2224544 -1 - 1935 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) Multidrug Resistance Efflux Pumps
fig|6666666.229908.peg.2248 CDS CP003496.2 2227682 2226498 -2 - 1185 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229908.peg.2249 CDS CP003496.2 2227883 2229574 2 + 1692 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229908.peg.2250 CDS CP003496.2 2229829 2229972 1 + 144 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.2251 CDS CP003496.2 2229982 2230278 1 + 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229908.peg.2252 CDS CP003496.2 2230391 2230275 -2 - 117 hypothetical protein - none -
fig|6666666.229908.peg.2253 CDS CP003496.2 2230390 2230746 1 + 357 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229908.peg.2254 CDS CP003496.2 2230935 2230735 -3 - 201 Mobile element protein - none -
fig|6666666.229908.peg.2255 CDS CP003496.2 2231062 2230937 -1 - 126 Mobile element protein - none -
fig|6666666.229908.peg.2256 CDS CP003496.2 2231379 2232773 3 + 1395 hypothetical protein - none -
fig|6666666.229908.peg.2257 CDS CP003496.2 2232784 2232945 1 + 162 hypothetical protein - none -
fig|6666666.229908.peg.2258 CDS CP003496.2 2233018 2233422 1 + 405 hypothetical protein - none -
fig|6666666.229908.peg.2259 CDS CP003496.2 2233404 2235695 3 + 2292 hypothetical protein - none -
fig|6666666.229908.peg.2260 CDS CP003496.2 2236022 2236891 2 + 870 hypothetical protein - none -
fig|6666666.229908.peg.2261 CDS CP003496.2 2236860 2236988 3 + 129 hypothetical protein - none -
fig|6666666.229908.peg.2262 CDS CP003496.2 2237458 2238642 1 + 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229908.peg.2263 CDS CP003496.2 2238657 2239343 3 + 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229908.peg.2264 CDS CP003496.2 2239343 2240593 2 + 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229908.peg.2265 CDS CP003496.2 2240694 2241773 3 + 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229908.peg.2266 CDS CP003496.2 2241904 2241782 -1 - 123 hypothetical protein - none -
fig|6666666.229908.peg.2267 CDS CP003496.2 2241919 2243325 1 + 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229908.peg.2268 CDS CP003496.2 2243349 2244431 3 + 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229908.peg.2269 CDS CP003496.2 2244447 2246096 3 + 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229908.peg.2270 CDS CP003496.2 2247301 2246417 -1 - 885 hypothetical protein - none -
fig|6666666.229908.peg.2271 CDS CP003496.2 2247544 2248017 1 + 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229908.peg.2272 CDS CP003496.2 2248024 2248449 1 + 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229908.peg.2273 CDS CP003496.2 2248468 2249451 1 + 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229908.peg.2274 CDS CP003496.2 2249461 2249952 1 + 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229908.peg.2275 CDS CP003496.2 2249961 2250584 3 + 624 L-lysine permease - none -
fig|6666666.229908.peg.2276 CDS CP003496.2 2250606 2251418 3 + 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229908.peg.2277 CDS CP003496.2 2251756 2251508 -1 - 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229908.peg.2278 CDS CP003496.2 2252095 2251826 -1 - 270 hypothetical protein - none -
fig|6666666.229908.peg.2279 CDS CP003496.2 2253247 2252117 -1 - 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229908.peg.2280 CDS CP003496.2 2254221 2253268 -3 - 954 hypothetical protein - none -
fig|6666666.229908.peg.2281 CDS CP003496.2 2255284 2254223 -1 - 1062 hypothetical protein - none -
fig|6666666.229908.peg.2282 CDS CP003496.2 2257589 2255319 -2 - 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229908.peg.2283 CDS CP003496.2 2259364 2257892 -1 - 1473 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System
fig|6666666.229908.peg.2284 CDS CP003496.2 2259466 2259627 1 + 162 hypothetical protein - none -
fig|6666666.229908.peg.2285 CDS CP003496.2 2259638 2260666 2 + 1029 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229908.peg.2286 CDS CP003496.2 2260766 2262748 2 + 1983 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229908.peg.2287 CDS CP003496.2 2262732 2263772 3 + 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229908.peg.2288 CDS CP003496.2 2265883 2263832 -1 - 2052 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229908.peg.2289 CDS CP003496.2 2266867 2265977 -1 - 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229908.peg.2290 CDS CP003496.2 2268427 2266889 -1 - 1539 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229908.peg.2291 CDS CP003496.2 2268582 2268451 -3 - 132 hypothetical protein - none -
fig|6666666.229908.peg.2292 CDS CP003496.2 2269741 2268551 -1 - 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229908.peg.2293 CDS CP003496.2 2270197 2271315 1 + 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229908.peg.2294 CDS CP003496.2 2271392 2272675 2 + 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229908.peg.2295 CDS CP003496.2 2272761 2273663 3 + 903 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229908.peg.2296 CDS CP003496.2 2273734 2273865 1 + 132 hypothetical protein - none -
fig|6666666.229908.peg.2297 CDS CP003496.2 2274835 2274017 -1 - 819 Aldose 1-epimerase - none -
fig|6666666.229908.peg.2298 CDS CP003496.2 2274911 2276848 2 + 1938 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229908.peg.2299 CDS CP003496.2 2276851 2277573 1 + 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229908.peg.2300 CDS CP003496.2 2277605 2278162 2 + 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229908.peg.2301 CDS CP003496.2 2278205 2278810 2 + 606 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229908.peg.2302 CDS CP003496.2 2278811 2279893 2 + 1083 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229908.peg.2303 CDS CP003496.2 2279960 2281117 2 + 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229908.peg.2304 CDS CP003496.2 2282587 2281205 -1 - 1383 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229908.peg.2305 CDS CP003496.2 2283389 2283616 2 + 228 hypothetical protein - none -
fig|6666666.229908.peg.2306 CDS CP003496.2 2284389 2285210 3 + 822 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229908.peg.2307 CDS CP003496.2 2285732 2286658 2 + 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229908.peg.2308 CDS CP003496.2 2286682 2287128 1 + 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229908.peg.2309 CDS CP003496.2 2287137 2287748 3 + 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229908.peg.2310 CDS CP003496.2 2287748 2288311 2 + 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229908.peg.2311 CDS CP003496.2 2289304 2288369 -1 - 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229908.peg.2312 CDS CP003496.2 2289418 2290848 1 + 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229908.peg.2313 CDS CP003496.2 2291270 2290890 -2 - 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229908.peg.2314 CDS CP003496.2 2292466 2291267 -1 - 1200 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Archaea
fig|6666666.229908.peg.2315 CDS CP003496.2 2292972 2292472 -3 - 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229908.peg.2316 CDS CP003496.2 2293954 2292989 -1 - 966 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229908.peg.2317 CDS CP003496.2 2294095 2294511 1 + 417 putative membrane protein - none -
fig|6666666.229908.peg.2318 CDS CP003496.2 2296613 2294601 -2 - 2013 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229908.peg.2319 CDS CP003496.2 2297112 2296615 -3 - 498 FIG00697418: hypothetical protein - none -
fig|6666666.229908.peg.2320 CDS CP003496.2 2297323 2298324 1 + 1002 ABC transporter, solute-binding protein - none -
fig|6666666.229908.peg.2321 CDS CP003496.2 2298324 2299337 3 + 1014 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229908.peg.2322 CDS CP003496.2 2299334 2300083 2 + 750 ABC transporter ATP-binding protein - none -
fig|6666666.229908.peg.2323 CDS CP003496.2 2300178 2300480 3 + 303 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229908.peg.2324 CDS CP003496.2 2300477 2302573 2 + 2097 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229908.peg.2325 CDS CP003496.2 2302902 2302693 -3 - 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229908.peg.2326 CDS CP003496.2 2304019 2302985 -1 - 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229908.peg.2327 CDS CP003496.2 2304826 2304032 -1 - 795 Glutathione synthetase (EC 6.3.2.3) Cluster containing Glutathione synthetase;
Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229908.peg.2328 CDS CP003496.2 2305890 2304826 -3 - 1065 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229908.peg.2329 CDS CP003496.2 2306720 2306025 -2 - 696 hypothetical protein - none -
fig|6666666.229908.peg.2330 CDS CP003496.2 2306920 2307183 1 + 264 Phage tail fibers Phage tail fiber proteins
fig|6666666.229908.peg.2331 CDS CP003496.2 2307220 2308173 1 + 954 Mobile element protein - none -
fig|6666666.229908.peg.2332 CDS CP003496.2 2308357 2308139 -1 - 219 Mobile element protein - none -
fig|6666666.229908.peg.2333 CDS CP003496.2 2308875 2308345 -3 - 531 Mobile element protein - none -
fig|6666666.229908.rna.1 RNA CP003496.2 103865 103947 2 + 83 tRNA-Leu-CAA tRNAs
fig|6666666.229908.rna.2 RNA CP003496.2 127493 127420 -2 - 74 tRNA-Val-GAC tRNAs
fig|6666666.229908.rna.3 RNA CP003496.2 191712 191642 -3 - 71 tRNA-Pseudo-AAC - none -
fig|6666666.229908.rna.4 RNA CP003496.2 361684 361611 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.229908.rna.5 RNA CP003496.2 363710 363638 -2 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.229908.rna.6 RNA CP003496.2 363821 363748 -2 - 74 tRNA-Asp-GTC - none -
fig|6666666.229908.rna.7 RNA CP003496.2 363946 363828 -1 - 119 5S RNA - none -
fig|6666666.229908.rna.8 RNA CP003496.2 364111 363993 -1 - 119 5S RNA - none -
fig|6666666.229908.rna.9 RNA CP003496.2 367402 364360 -1 - 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229908.rna.10 RNA CP003496.2 367757 367685 -2 - 73 tRNA-Ala-TGC - none -
fig|6666666.229908.rna.11 RNA CP003496.2 367883 367810 -2 - 74 tRNA-Ile-GAT - none -
fig|6666666.229908.rna.12 RNA CP003496.2 369507 367968 -3 - 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229908.rna.13 RNA CP003496.2 369768 369695 -3 - 74 tRNA-Pro-TGG - none -
fig|6666666.229908.rna.14 RNA CP003496.2 369846 369774 -3 - 73 tRNA-His-GTG - none -
fig|6666666.229908.rna.15 RNA CP003496.2 369954 369881 -3 - 74 tRNA-Arg-CCG tRNAs
fig|6666666.229908.rna.16 RNA CP003496.2 424610 424539 -2 - 72 tRNA-Gln-TTG - none -
fig|6666666.229908.rna.17 RNA CP003496.2 424722 424651 -3 - 72 tRNA-Gln-TTG - none -
fig|6666666.229908.rna.18 RNA CP003496.2 424836 424755 -3 - 82 tRNA-Leu-TAG - none -
fig|6666666.229908.rna.19 RNA CP003496.2 424918 424845 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.229908.rna.20 RNA CP003496.2 440753 440825 2 + 73 tRNA-Asn-GTT - none -
fig|6666666.229908.rna.21 RNA CP003496.2 504162 504235 3 + 74 tRNA-Asp-GTC - none -
fig|6666666.229908.rna.22 RNA CP003496.2 504261 504334 3 + 74 tRNA-Asp-GTC - none -
fig|6666666.229908.rna.23 RNA CP003496.2 612742 612669 -1 - 74 tRNA-Lys-CTT - none -
fig|6666666.229908.rna.24 RNA CP003496.2 612843 612771 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.229908.rna.25 RNA CP003496.2 612946 612874 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.229908.rna.26 RNA CP003496.2 661504 661418 -1 - 87 tRNA-Ser-TGA - none -
fig|6666666.229908.rna.27 RNA CP003496.2 668903 668975 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229908.rna.28 RNA CP003496.2 668987 669057 2 + 71 tRNA-Cys-GCA tRNAs
fig|6666666.229908.rna.29 RNA CP003496.2 704913 704841 -3 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.229908.rna.30 RNA CP003496.2 706726 706798 1 + 73 tRNA-Val-TAC - none -
fig|6666666.229908.rna.31 RNA CP003496.2 706839 706911 3 + 73 tRNA-Val-TAC - none -
fig|6666666.229908.rna.32 RNA CP003496.2 706942 707014 1 + 73 tRNA-Val-TAC - none -
fig|6666666.229908.rna.33 RNA CP003496.2 741676 741558 -1 - 119 5S RNA - none -
fig|6666666.229908.rna.34 RNA CP003496.2 744967 741925 -1 - 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229908.rna.35 RNA CP003496.2 745249 745177 -1 - 73 tRNA-Glu-TTC - none -
fig|6666666.229908.rna.36 RNA CP003496.2 746884 745345 -1 - 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229908.rna.37 RNA CP003496.2 836374 836302 -1 - 73 tRNA-Thr-GGT - none -
fig|6666666.229908.rna.38 RNA CP003496.2 836452 836381 -1 - 72 tRNA-Gly-TCC - none -
fig|6666666.229908.rna.39 RNA CP003496.2 836577 836496 -3 - 82 tRNA-Tyr-GTA - none -
fig|6666666.229908.rna.40 RNA CP003496.2 836683 836611 -1 - 73 tRNA-Thr-TGT - none -
fig|6666666.229908.rna.41 RNA CP003496.2 995456 995384 -2 - 73 tRNA-Asn-GTT - none -
fig|6666666.229908.rna.42 RNA CP003496.2 995536 995464 -1 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.229908.rna.43 RNA CP003496.2 1194840 1194767 -3 - 74 tRNA-Arg-TCT - none -
fig|6666666.229908.rna.44 RNA CP003496.2 1194950 1194877 -2 - 74 tRNA-Pro-TGG - none -
fig|6666666.229908.rna.45 RNA CP003496.2 1230586 1230676 1 + 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229908.rna.46 RNA CP003496.2 1306322 1306412 2 + 91 tRNA-Ser-GCT - none -
fig|6666666.229908.rna.47 RNA CP003496.2 1306433 1306506 2 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.229908.rna.48 RNA CP003496.2 1306564 1306637 1 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.229908.rna.49 RNA CP003496.2 1342523 1344062 2 + 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229908.rna.50 RNA CP003496.2 1344147 1344220 3 + 74 tRNA-Ile-GAT - none -
fig|6666666.229908.rna.51 RNA CP003496.2 1344273 1344345 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.229908.rna.52 RNA CP003496.2 1344628 1347670 1 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229908.rna.53 RNA CP003496.2 1347919 1348037 1 + 119 5S RNA - none -
fig|6666666.229908.rna.54 RNA CP003496.2 1424461 1424543 1 + 83 tRNA-Leu-GAG tRNAs
fig|6666666.229908.rna.55 RNA CP003496.2 1452764 1452847 2 + 84 tRNA-Leu-CAG tRNAs
fig|6666666.229908.rna.56 RNA CP003496.2 1537507 1539046 1 + 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229908.rna.57 RNA CP003496.2 1539142 1539214 1 + 73 tRNA-Glu-TTC - none -
fig|6666666.229908.rna.58 RNA CP003496.2 1539424 1542466 1 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229908.rna.59 RNA CP003496.2 1542715 1542833 1 + 119 5S RNA - none -
fig|6666666.229908.rna.60 RNA CP003496.2 1669829 1671368 2 + 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229908.rna.61 RNA CP003496.2 1671464 1671536 2 + 73 tRNA-Glu-TTC - none -
fig|6666666.229908.rna.62 RNA CP003496.2 1671746 1674788 2 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229908.rna.63 RNA CP003496.2 1675037 1675155 2 + 119 5S RNA - none -
fig|6666666.229908.rna.64 RNA CP003496.2 1708782 1708709 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229908.rna.65 RNA CP003496.2 1755694 1755780 1 + 87 tRNA-Ser-GGA tRNAs
fig|6666666.229908.rna.66 RNA CP003496.2 1913375 1913448 2 + 74 tRNA-Met-CAT - none -
fig|6666666.229908.rna.67 RNA CP003496.2 1942803 1942731 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.229908.rna.68 RNA CP003496.2 1942941 1942858 -3 - 84 tRNA-Leu-TAA - none -
fig|6666666.229908.rna.69 RNA CP003496.2 1943018 1942946 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229908.rna.70 RNA CP003496.2 2135804 2137343 2 + 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229908.rna.71 RNA CP003496.2 2137439 2137511 2 + 73 tRNA-Glu-TTC - none -
fig|6666666.229908.rna.72 RNA CP003496.2 2137721 2140763 2 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229908.rna.73 RNA CP003496.2 2141012 2141130 2 + 119 5S RNA - none -
fig|6666666.229908.rna.74 RNA CP003496.2 2178355 2178283 -1 - 73 tRNA-Gly-GCC tRNAs