fig|6666666.229909.peg.1 CDS AEJK02000001.1 1571 312 -2 - 1260 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229909.peg.2 CDS AEJK02000001.1 2243 1719 -2 - 525 FIG00696143: hypothetical protein - none -
fig|6666666.229909.peg.3 CDS AEJK02000001.1 3057 2275 -3 - 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229909.peg.4 CDS AEJK02000001.1 4044 3061 -3 - 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229909.peg.5 CDS AEJK02000001.1 4673 4041 -2 - 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229909.peg.6 CDS AEJK02000001.1 5718 4675 -3 - 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229909.peg.7 CDS AEJK02000001.1 6195 5857 -3 - 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229909.peg.8 CDS AEJK02000001.1 7029 6271 -3 - 759 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229909.peg.9 CDS AEJK02000001.1 7306 8127 1 + 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229909.peg.10 CDS AEJK02000001.1 8130 9374 3 + 1245 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) - none -
fig|6666666.229909.peg.11 CDS AEJK02000001.1 9371 10003 2 + 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229909.peg.12 CDS AEJK02000001.1 10006 10782 1 + 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229909.peg.13 CDS AEJK02000001.1 10871 12223 2 + 1353 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229909.peg.14 CDS AEJK02000001.1 12248 13588 2 + 1341 FIG00782214: hypothetical protein - none -
fig|6666666.229909.peg.15 CDS AEJK02000001.1 13759 14298 1 + 540 Metal-dependent hydrolase - none -
fig|6666666.229909.peg.16 CDS AEJK02000001.1 14398 14270 -1 - 129 hypothetical protein - none -
fig|6666666.229909.peg.17 CDS AEJK02000001.1 14487 16142 3 + 1656 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229909.peg.18 CDS AEJK02000001.1 16336 17154 1 + 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229909.peg.19 CDS AEJK02000001.1 19960 17360 -1 - 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229909.peg.20 CDS AEJK02000001.1 20831 20604 -2 - 228 hypothetical protein - none -
fig|6666666.229909.peg.21 CDS AEJK02000001.1 21676 21557 -1 - 120 hypothetical protein - none -
fig|6666666.229909.peg.22 CDS AEJK02000002.1 1161 2345 3 + 1185 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229909.peg.23 CDS AEJK02000002.1 2365 4299 1 + 1935 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) Multidrug Resistance Efflux Pumps
fig|6666666.229909.peg.24 CDS AEJK02000002.1 4376 5749 2 + 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229909.peg.25 CDS AEJK02000002.1 7545 6004 -3 - 1542 Esterase/lipase - none -
fig|6666666.229909.peg.26 CDS AEJK02000002.1 7985 7662 -2 - 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229909.peg.27 CDS AEJK02000002.1 8758 8069 -1 - 690 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229909.peg.28 CDS AEJK02000002.1 8931 8755 -3 - 177 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229909.peg.29 CDS AEJK02000002.1 9653 8976 -2 - 678 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229909.peg.30 CDS AEJK02000002.1 9785 10693 2 + 909 Putative surface protein - none -
fig|6666666.229909.peg.31 CDS AEJK02000002.1 10707 12164 3 + 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.32 CDS AEJK02000002.1 12226 12867 1 + 642 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229909.peg.33 CDS AEJK02000002.1 14270 12924 -2 - 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229909.peg.34 CDS AEJK02000002.1 15189 14293 -3 - 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229909.peg.35 CDS AEJK02000002.1 15415 15660 1 + 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229909.peg.36 CDS AEJK02000002.1 15671 16561 2 + 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229909.peg.37 CDS AEJK02000002.1 16646 18496 2 + 1851 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229909.peg.38 CDS AEJK02000002.1 19374 18616 -3 - 759 Galactitol utilization operon repressor - none -
fig|6666666.229909.peg.39 CDS AEJK02000002.1 20421 19441 -3 - 981 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) - none -
fig|6666666.229909.peg.40 CDS AEJK02000002.1 22645 20444 -1 - 2202 PTS system, galactitol-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.229909.peg.41 CDS AEJK02000002.1 23613 22660 -3 - 954 Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) Lactose and Galactose Uptake and Utilization
fig|6666666.229909.peg.42 CDS AEJK02000002.1 23704 23823 1 + 120 hypothetical protein - none -
fig|6666666.229909.peg.43 CDS AEJK02000002.1 24943 24590 -1 - 354 LSU ribosomal protein L20p Ribosome LSU bacterial
fig|6666666.229909.peg.44 CDS AEJK02000002.1 25212 25418 3 + 207 hypothetical protein - none -
fig|6666666.229909.peg.45 CDS AEJK02000002.1 25898 25419 -2 - 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229909.peg.46 CDS AEJK02000003.1 185 2302 2 + 2118 Probable phospholipase protein - none -
fig|6666666.229909.peg.47 CDS AEJK02000003.1 2302 3474 1 + 1173 FOG: TPR repeat, SEL1 subfamily - none -
fig|6666666.229909.peg.48 CDS AEJK02000003.1 3519 3638 3 + 120 hypothetical protein - none -
fig|6666666.229909.peg.49 CDS AEJK02000003.1 4979 3909 -2 - 1071 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229909.peg.50 CDS AEJK02000003.1 5447 5052 -2 - 396 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229909.peg.51 CDS AEJK02000003.1 5868 5503 -3 - 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229909.peg.52 CDS AEJK02000003.1 6010 8049 1 + 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229909.peg.53 CDS AEJK02000003.1 8675 8175 -2 - 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229909.peg.54 CDS AEJK02000003.1 10463 8736 -2 - 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229909.peg.55 CDS AEJK02000003.1 10837 10580 -1 - 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229909.peg.56 CDS AEJK02000003.1 12098 11058 -2 - 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229909.peg.57 CDS AEJK02000003.1 12170 12718 2 + 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229909.peg.58 CDS AEJK02000003.1 13415 13008 -2 - 408 putative lipoprotein - none -
fig|6666666.229909.peg.59 CDS AEJK02000003.1 14812 13424 -1 - 1389 putative exported protein - none -
fig|6666666.229909.peg.60 CDS AEJK02000003.1 15683 14823 -2 - 861 FIG00698030: hypothetical protein - none -
fig|6666666.229909.peg.61 CDS AEJK02000003.1 16315 15683 -1 - 633 Possible exported protein - none -
fig|6666666.229909.peg.62 CDS AEJK02000003.1 16698 16327 -3 - 372 FIG00696467: hypothetical protein - none -
fig|6666666.229909.peg.63 CDS AEJK02000003.1 17124 16717 -3 - 408 FIG00696269: hypothetical protein - none -
fig|6666666.229909.peg.64 CDS AEJK02000003.1 17380 17141 -1 - 240 hypothetical protein - none -
fig|6666666.229909.peg.65 CDS AEJK02000003.1 17703 17380 -3 - 324 FIG00696053: hypothetical protein - none -
fig|6666666.229909.peg.66 CDS AEJK02000003.1 18051 17938 -3 - 114 hypothetical protein - none -
fig|6666666.229909.peg.67 CDS AEJK02000003.1 18753 19514 3 + 762 DUF1526 domain-containing protein - none -
fig|6666666.229909.peg.68 CDS AEJK02000003.1 20681 20121 -2 - 561 Cytolethal distending toxin subunit C Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229909.peg.69 CDS AEJK02000003.1 21543 20692 -3 - 852 Cytolethal distending toxin subunit B Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229909.peg.70 CDS AEJK02000003.1 22226 21558 -2 - 669 Cytolethal distending toxin subunit A Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229909.peg.71 CDS AEJK02000003.1 23144 22800 -2 - 345 Programmed cell death toxin MazF - none -
fig|6666666.229909.peg.72 CDS AEJK02000003.1 24151 23972 -1 - 180 hypothetical protein - none -
fig|6666666.229909.peg.73 CDS AEJK02000003.1 24644 24465 -2 - 180 Haemophilus-specific protein, uncharacterized - none -
fig|6666666.229909.peg.74 CDS AEJK02000003.1 24938 26848 2 + 1911 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229909.peg.75 CDS AEJK02000003.1 26932 27753 1 + 822 probable phage integrase - none -
fig|6666666.229909.peg.76 CDS AEJK02000003.1 28266 29780 3 + 1515 Dca - none -
fig|6666666.229909.peg.77 CDS AEJK02000003.1 29809 30426 1 + 618 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229909.peg.78 CDS AEJK02000003.1 30413 31921 2 + 1509 putative integral membrane protein - none -
fig|6666666.229909.peg.79 CDS AEJK02000003.1 31929 32849 3 + 921 RfbJ protein - none -
fig|6666666.229909.peg.80 CDS AEJK02000003.1 33237 35030 3 + 1794 Mlr4739 protein - none -
fig|6666666.229909.peg.81 CDS AEJK02000003.1 35211 35083 -3 - 129 hypothetical protein - none -
fig|6666666.229909.peg.82 CDS AEJK02000003.1 35186 35680 2 + 495 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229909.peg.83 CDS AEJK02000003.1 35677 37164 1 + 1488 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229909.peg.84 CDS AEJK02000003.1 37164 39014 3 + 1851 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229909.peg.85 CDS AEJK02000003.1 39029 39973 2 + 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229909.peg.86 CDS AEJK02000003.1 40093 40389 1 + 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229909.peg.87 CDS AEJK02000003.1 40462 40349 -1 - 114 hypothetical protein - none -
fig|6666666.229909.peg.88 CDS AEJK02000003.1 40404 40712 3 + 309 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229909.peg.89 CDS AEJK02000003.1 40637 40753 2 + 117 hypothetical protein - none -
fig|6666666.229909.peg.90 CDS AEJK02000003.1 41726 40767 -2 - 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229909.peg.91 CDS AEJK02000003.1 42889 41810 -1 - 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229909.peg.92 CDS AEJK02000003.1 44317 42902 -1 - 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229909.peg.93 CDS AEJK02000003.1 44583 46214 3 + 1632 Peptide transport periplasmic protein SapA Peptide ABC transport system Sap
fig|6666666.229909.peg.94 CDS AEJK02000003.1 46214 47179 2 + 966 Peptide transport system permease protein SapB Peptide ABC transport system Sap
fig|6666666.229909.peg.95 CDS AEJK02000003.1 47169 48056 3 + 888 Peptide transport system permease protein SapC Peptide ABC transport system Sap
fig|6666666.229909.peg.96 CDS AEJK02000003.1 48064 49116 1 + 1053 Peptide transport system ATP-binding protein SapD Peptide ABC transport system Sap
fig|6666666.229909.peg.97 CDS AEJK02000003.1 49120 49938 1 + 819 Peptide transport system ATP-binding protein SapF Peptide ABC transport system Sap
fig|6666666.229909.peg.98 CDS AEJK02000004.1 632 772 2 + 141 hypothetical protein - none -
fig|6666666.229909.peg.99 CDS AEJK02000004.1 1356 724 -3 - 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229909.peg.100 CDS AEJK02000004.1 1527 2852 3 + 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229909.peg.101 CDS AEJK02000004.1 2880 3002 3 + 123 hypothetical protein - none -
fig|6666666.229909.peg.102 CDS AEJK02000004.1 3263 2970 -2 - 294 AagD - none -
fig|6666666.229909.peg.103 CDS AEJK02000004.1 4501 3266 -1 - 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229909.peg.104 CDS AEJK02000004.1 6426 4510 -3 - 1917 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229909.peg.105 CDS AEJK02000004.1 8829 6442 -3 - 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229909.peg.106 CDS AEJK02000004.1 9084 8971 -3 - 114 hypothetical protein - none -
fig|6666666.229909.peg.107 CDS AEJK02000004.1 9851 9132 -2 - 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229909.peg.108 CDS AEJK02000004.1 11227 9977 -1 - 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229909.peg.109 CDS AEJK02000004.1 12693 11518 -3 - 1176 Cof protein - none -
fig|6666666.229909.peg.110 CDS AEJK02000004.1 13639 12803 -1 - 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229909.peg.111 CDS AEJK02000004.1 14450 13653 -2 - 798 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229909.peg.112 CDS AEJK02000004.1 15433 14468 -1 - 966 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229909.peg.113 CDS AEJK02000004.1 16316 15732 -2 - 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229909.peg.114 CDS AEJK02000004.1 16404 17780 3 + 1377 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229909.peg.115 CDS AEJK02000004.1 17819 18469 2 + 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229909.peg.116 CDS AEJK02000004.1 18478 19413 1 + 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229909.peg.117 CDS AEJK02000005.1 1194 82 -3 - 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229909.peg.118 CDS AEJK02000005.1 1367 3427 2 + 2061 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229909.peg.119 CDS AEJK02000005.1 3755 3561 -2 - 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229909.peg.120 CDS AEJK02000005.1 4096 3755 -1 - 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229909.peg.121 CDS AEJK02000005.1 5967 4108 -3 - 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229909.peg.122 CDS AEJK02000005.1 6509 5988 -2 - 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229909.peg.123 CDS AEJK02000005.1 6844 6521 -1 - 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229909.peg.124 CDS AEJK02000005.1 7359 6976 -3 - 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229909.peg.125 CDS AEJK02000005.1 8633 7419 -2 - 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229909.peg.126 CDS AEJK02000005.1 9160 8687 -1 - 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229909.peg.127 CDS AEJK02000005.1 9962 9222 -2 - 741 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229909.peg.128 CDS AEJK02000005.1 10113 10913 3 + 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229909.peg.129 CDS AEJK02000005.1 11227 11069 -1 - 159 hypothetical protein - none -
fig|6666666.229909.peg.130 CDS AEJK02000006.1 36 851 3 + 816 Probable phospholipase protein - none -
fig|6666666.229909.peg.131 CDS AEJK02000008.1 353 1741 2 + 1389 hypothetical protein - none -
fig|6666666.229909.peg.132 CDS AEJK02000008.1 1731 3008 3 + 1278 hypothetical protein - none -
fig|6666666.229909.peg.133 CDS AEJK02000008.1 3010 3765 1 + 756 hypothetical protein - none -
fig|6666666.229909.peg.134 CDS AEJK02000008.1 3762 4823 3 + 1062 hypothetical protein - none -
fig|6666666.229909.peg.135 CDS AEJK02000008.1 5335 5814 1 + 480 hypothetical protein - none -
fig|6666666.229909.peg.136 CDS AEJK02000008.1 5936 5802 -2 - 135 hypothetical protein - none -
fig|6666666.229909.peg.137 CDS AEJK02000008.1 6275 6430 2 + 156 hypothetical protein - none -
fig|6666666.229909.peg.138 CDS AEJK02000008.1 6423 8687 3 + 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229909.peg.139 CDS AEJK02000008.1 8831 9475 2 + 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229909.peg.140 CDS AEJK02000008.1 9886 10677 1 + 792 putative lipoprotein - none -
fig|6666666.229909.peg.141 CDS AEJK02000008.1 11706 10879 -3 - 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229909.peg.142 CDS AEJK02000008.1 11801 12244 2 + 444 FIG00904084: hypothetical protein - none -
fig|6666666.229909.peg.143 CDS AEJK02000008.1 12930 12334 -3 - 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.144 CDS AEJK02000008.1 13027 13380 1 + 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229909.peg.145 CDS AEJK02000008.1 13401 14831 3 + 1431 Transglycosylase, Slt family - none -
fig|6666666.229909.peg.146 CDS AEJK02000008.1 14842 14988 1 + 147 hypothetical protein - none -
fig|6666666.229909.peg.147 CDS AEJK02000008.1 15570 15031 -3 - 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229909.peg.148 CDS AEJK02000008.1 17138 15594 -2 - 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229909.peg.149 CDS AEJK02000008.1 17333 18064 2 + 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229909.peg.150 CDS AEJK02000008.1 19399 18185 -1 - 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229909.peg.151 CDS AEJK02000008.1 19516 20820 1 + 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229909.peg.152 CDS AEJK02000008.1 20811 22517 3 + 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229909.peg.153 CDS AEJK02000008.1 22570 23319 1 + 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229909.peg.154 CDS AEJK02000008.1 23415 23684 3 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229909.peg.155 CDS AEJK02000008.1 23892 25046 3 + 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229909.peg.156 CDS AEJK02000009.1 294 1562 3 + 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229909.peg.157 CDS AEJK02000009.1 1743 2114 3 + 372 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) Folate Biosynthesis
fig|6666666.229909.peg.158 CDS AEJK02000009.1 2148 2888 3 + 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229909.peg.159 CDS AEJK02000009.1 2900 3310 2 + 411 excinuclease ABC subunit A - none -
fig|6666666.229909.peg.160 CDS AEJK02000009.1 3366 3938 3 + 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229909.peg.161 CDS AEJK02000009.1 4002 4616 3 + 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229909.peg.162 CDS AEJK02000009.1 4625 5644 2 + 1020 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229909.peg.163 CDS AEJK02000009.1 6009 5698 -3 - 312 Chromosome segregation ATPases - none -
fig|6666666.229909.peg.164 CDS AEJK02000009.1 6557 8026 2 + 1470 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229909.peg.165 CDS AEJK02000009.1 8041 9177 1 + 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229909.peg.166 CDS AEJK02000009.1 9695 10099 2 + 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229909.peg.167 CDS AEJK02000009.1 10129 10818 1 + 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229909.peg.168 CDS AEJK02000009.1 10904 11326 2 + 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229909.peg.169 CDS AEJK02000009.1 11343 12491 3 + 1149 TolA protein Ton and Tol transport systems
fig|6666666.229909.peg.170 CDS AEJK02000009.1 12526 13806 1 + 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229909.peg.171 CDS AEJK02000009.1 13821 14288 3 + 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229909.peg.172 CDS AEJK02000009.1 14897 15514 2 + 618 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229909.peg.173 CDS AEJK02000009.1 15528 16244 3 + 717 Type II secretory pathway, component PulJ - none -
fig|6666666.229909.peg.174 CDS AEJK02000009.1 16241 16936 2 + 696 FIG00696574: hypothetical protein - none -
fig|6666666.229909.peg.175 CDS AEJK02000009.1 16911 17213 3 + 303 FIG00696353: hypothetical protein - none -
fig|6666666.229909.peg.176 CDS AEJK02000009.1 17259 20648 3 + 3390 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229909.peg.177 CDS AEJK02000009.1 21093 20650 -3 - 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229909.peg.178 CDS AEJK02000009.1 21552 21103 -3 - 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229909.peg.179 CDS AEJK02000009.1 21608 22612 2 + 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229909.peg.180 CDS AEJK02000009.1 22699 22848 1 + 150 hypothetical protein - none -
fig|6666666.229909.peg.181 CDS AEJK02000009.1 22851 22991 3 + 141 hypothetical protein - none -
fig|6666666.229909.peg.182 CDS AEJK02000009.1 23228 23770 2 + 543 hypothetical protein - none -
fig|6666666.229909.peg.183 CDS AEJK02000009.1 23905 25167 1 + 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis;
YrdC-YciO-Sua5 protein family
fig|6666666.229909.peg.184 CDS AEJK02000009.1 26274 26780 3 + 507 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229909.peg.185 CDS AEJK02000009.1 26793 29960 3 + 3168 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229909.peg.186 CDS AEJK02000009.1 30029 32152 2 + 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229909.peg.187 CDS AEJK02000011.1 229 660 1 + 432 hypothetical protein - none -
fig|6666666.229909.peg.188 CDS AEJK02000011.1 673 1698 1 + 1026 hypothetical protein - none -
fig|6666666.229909.peg.189 CDS AEJK02000012.1 310 441 1 + 132 hypothetical protein - none -
fig|6666666.229909.peg.190 CDS AEJK02000012.1 588 812 3 + 225 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229909.peg.191 CDS AEJK02000012.1 816 1478 3 + 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229909.peg.192 CDS AEJK02000012.1 1516 2280 1 + 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229909.peg.193 CDS AEJK02000012.1 2301 3323 3 + 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229909.peg.194 CDS AEJK02000012.1 3938 4309 2 + 372 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.229909.peg.195 CDS AEJK02000012.1 4320 4631 3 + 312 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.229909.peg.196 CDS AEJK02000012.1 4760 5188 2 + 429 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.229909.peg.197 CDS AEJK02000012.1 5201 5506 2 + 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229909.peg.198 CDS AEJK02000012.1 5543 5935 2 + 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229909.peg.199 CDS AEJK02000012.1 6173 6484 2 + 312 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.229909.peg.200 CDS AEJK02000012.1 6498 6851 3 + 354 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.229909.peg.201 CDS AEJK02000012.1 6867 7367 3 + 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229909.peg.202 CDS AEJK02000012.1 7557 7991 3 + 435 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.229909.peg.203 CDS AEJK02000012.1 7995 9320 3 + 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229909.peg.204 CDS AEJK02000012.1 9598 9954 1 + 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229909.peg.205 CDS AEJK02000012.1 9970 10359 1 + 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229909.peg.206 CDS AEJK02000012.1 10389 11009 3 + 621 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229909.peg.207 CDS AEJK02000012.1 11038 12027 1 + 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229909.peg.208 CDS AEJK02000012.1 12069 12458 3 + 390 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.229909.peg.209 CDS AEJK02000012.1 13974 12754 -3 - 1221 Tyrosine-specific transport protein - none -
fig|6666666.229909.peg.210 CDS AEJK02000012.1 14097 13984 -3 - 114 hypothetical protein - none -
fig|6666666.229909.peg.211 CDS AEJK02000012.1 14787 14104 -3 - 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229909.peg.212 CDS AEJK02000012.1 16074 14803 -3 - 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229909.peg.213 CDS AEJK02000012.1 16373 16125 -2 - 249 FIG01200701: hypothetical protein - none -
fig|6666666.229909.peg.214 CDS AEJK02000012.1 16527 16402 -3 - 126 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229909.peg.215 CDS AEJK02000012.1 16604 16732 2 + 129 hypothetical protein - none -
fig|6666666.229909.peg.216 CDS AEJK02000012.1 16729 16884 1 + 156 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229909.peg.217 CDS AEJK02000012.1 16878 16997 3 + 120 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229909.peg.218 CDS AEJK02000012.1 17028 17243 3 + 216 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229909.peg.219 CDS AEJK02000012.1 17262 18725 3 + 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229909.peg.220 CDS AEJK02000012.1 18725 19237 2 + 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis;
Transport system clustering with HemG
fig|6666666.229909.peg.221 CDS AEJK02000013.1 636 133 -3 - 504 Mercuric resistance operon regulatory protein - none -
fig|6666666.229909.peg.222 CDS AEJK02000013.1 975 664 -3 - 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229909.peg.223 CDS AEJK02000013.1 1067 1384 2 + 318 hypothetical protein - none -
fig|6666666.229909.peg.224 CDS AEJK02000013.1 1394 4156 2 + 2763 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229909.peg.225 CDS AEJK02000013.1 4233 4637 3 + 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229909.peg.226 CDS AEJK02000013.1 6163 5129 -1 - 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229909.peg.227 CDS AEJK02000013.1 6666 6163 -3 - 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229909.peg.228 CDS AEJK02000013.1 6655 6783 1 + 129 hypothetical protein - none -
fig|6666666.229909.peg.229 CDS AEJK02000013.1 9396 6808 -3 - 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229909.peg.230 CDS AEJK02000013.1 9544 9374 -1 - 171 hypothetical protein - none -
fig|6666666.229909.peg.231 CDS AEJK02000013.1 9632 9516 -2 - 117 hypothetical protein - none -
fig|6666666.229909.peg.232 CDS AEJK02000013.1 10144 9587 -1 - 558 FIG00696423: hypothetical protein - none -
fig|6666666.229909.peg.233 CDS AEJK02000013.1 10465 10172 -1 - 294 nucleotidyltransferase - none -
fig|6666666.229909.peg.234 CDS AEJK02000013.1 10868 10449 -2 - 420 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229909.peg.235 CDS AEJK02000013.1 11786 10959 -2 - 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229909.peg.236 CDS AEJK02000013.1 12665 11802 -2 - 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229909.peg.237 CDS AEJK02000013.1 13675 12743 -1 - 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229909.peg.238 CDS AEJK02000013.1 14278 13742 -1 - 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229909.peg.239 CDS AEJK02000013.1 14827 14417 -1 - 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229909.peg.240 CDS AEJK02000013.1 14940 15551 3 + 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229909.peg.241 CDS AEJK02000013.1 15575 16942 2 + 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229909.peg.242 CDS AEJK02000013.1 17164 17913 1 + 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229909.peg.243 CDS AEJK02000013.1 18434 18027 -2 - 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229909.peg.244 CDS AEJK02000013.1 18572 19696 2 + 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229909.peg.245 CDS AEJK02000013.1 19709 20539 2 + 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229909.peg.246 CDS AEJK02000013.1 20892 21011 3 + 120 hypothetical protein - none -
fig|6666666.229909.peg.247 CDS AEJK02000013.1 22558 21179 -1 - 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229909.peg.248 CDS AEJK02000013.1 22712 23506 2 + 795 FIG001154: CcsA-related protein - none -
fig|6666666.229909.peg.249 CDS AEJK02000013.1 23581 24843 1 + 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229909.peg.250 CDS AEJK02000013.1 25018 25488 1 + 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229909.peg.251 CDS AEJK02000013.1 25492 25938 1 + 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229909.peg.252 CDS AEJK02000013.1 25948 26706 1 + 759 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229909.peg.253 CDS AEJK02000013.1 27567 26794 -3 - 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229909.peg.254 CDS AEJK02000013.1 28170 27643 -3 - 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229909.peg.255 CDS AEJK02000013.1 28332 29576 3 + 1245 Tryptophan-specific transport protein - none -
fig|6666666.229909.peg.256 CDS AEJK02000013.1 29600 29917 2 + 318 hypothetical protein - none -
fig|6666666.229909.peg.257 CDS AEJK02000013.1 29901 30170 3 + 270 hypothetical protein - none -
fig|6666666.229909.peg.258 CDS AEJK02000013.1 31259 30552 -2 - 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229909.peg.259 CDS AEJK02000013.1 31474 32001 1 + 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229909.peg.260 CDS AEJK02000013.1 32022 33353 3 + 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229909.peg.261 CDS AEJK02000013.1 33419 35002 2 + 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229909.peg.262 CDS AEJK02000013.1 35068 35844 1 + 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229909.peg.263 CDS AEJK02000013.1 35862 36356 3 + 495 Protein yfbU - none -
fig|6666666.229909.peg.264 CDS AEJK02000015.1 913 86 -1 - 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229909.peg.265 CDS AEJK02000015.1 1441 947 -1 - 495 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229909.peg.266 CDS AEJK02000015.1 3515 1434 -2 - 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229909.peg.267 CDS AEJK02000015.1 5640 3517 -3 - 2124 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229909.peg.268 CDS AEJK02000015.1 5952 5686 -3 - 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229909.peg.269 CDS AEJK02000015.1 6720 6010 -3 - 711 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229909.peg.270 CDS AEJK02000015.1 6891 7895 3 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229909.peg.271 CDS AEJK02000015.1 9222 9106 -3 - 117 hypothetical protein - none -
fig|6666666.229909.peg.272 CDS AEJK02000015.1 10079 10243 2 + 165 Mobile element protein - none -
fig|6666666.229909.peg.273 CDS AEJK02000015.1 10395 11051 3 + 657 Mobile element protein - none -
fig|6666666.229909.peg.274 CDS AEJK02000015.1 11529 11383 -3 - 147 hypothetical protein - none -
fig|6666666.229909.peg.275 CDS AEJK02000016.1 382 1335 1 + 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229909.peg.276 CDS AEJK02000016.1 1354 3465 1 + 2112 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229909.peg.277 CDS AEJK02000016.1 3923 3534 -2 - 390 Endoribonuclease L-PSP - none -
fig|6666666.229909.peg.278 CDS AEJK02000016.1 4454 3996 -2 - 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229909.peg.279 CDS AEJK02000016.1 5594 4536 -2 - 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229909.peg.280 CDS AEJK02000016.1 7667 5742 -2 - 1926 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229909.peg.281 CDS AEJK02000016.1 7748 8365 2 + 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229909.peg.282 CDS AEJK02000016.1 8552 11203 2 + 2652 Putative uncharacterized protein ydbH - none -
fig|6666666.229909.peg.283 CDS AEJK02000016.1 11200 11427 1 + 228 FIG00354920: hypothetical protein - none -
fig|6666666.229909.peg.284 CDS AEJK02000016.1 12227 12625 2 + 399 Integrase - none -
fig|6666666.229909.peg.285 CDS AEJK02000016.1 13037 12888 -2 - 150 hypothetical protein - none -
fig|6666666.229909.peg.286 CDS AEJK02000016.1 14335 13163 -1 - 1173 FOG: TPR repeat, SEL1 subfamily - none -
fig|6666666.229909.peg.287 CDS AEJK02000016.1 14700 14407 -3 - 294 miscellaneous; hypothetical/partial homology - none -
fig|6666666.229909.peg.288 CDS AEJK02000017.1 1045 143 -1 - 903 hypothetical protein - none -
fig|6666666.229909.peg.289 CDS AEJK02000017.1 2950 1091 -1 - 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229909.peg.290 CDS AEJK02000017.1 4341 2947 -3 - 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229909.peg.291 CDS AEJK02000017.1 4491 6206 3 + 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229909.peg.292 CDS AEJK02000017.1 6273 6602 3 + 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229909.peg.293 CDS AEJK02000017.1 6642 6896 3 + 255 YgfY COG2938 - none -
fig|6666666.229909.peg.294 CDS AEJK02000017.1 7029 7604 3 + 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229909.peg.295 CDS AEJK02000017.1 7648 8232 1 + 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229909.peg.296 CDS AEJK02000017.1 8315 9271 2 + 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229909.peg.297 CDS AEJK02000017.1 9281 9718 2 + 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229909.peg.298 CDS AEJK02000017.1 9799 10350 1 + 552 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229909.peg.299 CDS AEJK02000017.1 10404 11159 3 + 756 Short chain dehydrogenase - none -
fig|6666666.229909.peg.300 CDS AEJK02000017.1 12699 11239 -3 - 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229909.peg.301 CDS AEJK02000017.1 12814 13278 1 + 465 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229909.peg.302 CDS AEJK02000017.1 15710 13368 -2 - 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229909.peg.303 CDS AEJK02000017.1 16336 15776 -1 - 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229909.peg.304 CDS AEJK02000017.1 16537 17142 1 + 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229909.peg.305 CDS AEJK02000017.1 18445 17195 -1 - 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229909.peg.306 CDS AEJK02000017.1 18582 18463 -3 - 120 hypothetical protein - none -
fig|6666666.229909.peg.307 CDS AEJK02000017.1 18705 19019 3 + 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229909.peg.308 CDS AEJK02000017.1 19016 19468 2 + 453 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229909.peg.309 CDS AEJK02000017.1 19487 20905 2 + 1419 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229909.peg.310 CDS AEJK02000017.1 21002 23422 2 + 2421 DNA gyrase subunit B (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229909.peg.311 CDS AEJK02000017.1 24391 23477 -1 - 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229909.peg.312 CDS AEJK02000019.1 812 1429 2 + 618 hypothetical protein - none -
fig|6666666.229909.peg.313 CDS AEJK02000019.1 1997 2266 2 + 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229909.peg.314 CDS AEJK02000019.1 2283 3638 3 + 1356 FIG00732228: membrane protein - none -
fig|6666666.229909.peg.315 CDS AEJK02000019.1 3648 4472 3 + 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229909.peg.316 CDS AEJK02000019.1 4462 5406 1 + 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229909.peg.317 CDS AEJK02000019.1 6523 5573 -1 - 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p YrdC-YciO-Sua5 protein family
fig|6666666.229909.peg.318 CDS AEJK02000019.1 6586 7092 1 + 507 FIG001674: hypothetical protein - none -
fig|6666666.229909.peg.319 CDS AEJK02000019.1 9230 7089 -2 - 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229909.peg.320 CDS AEJK02000019.1 9712 9239 -1 - 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229909.peg.321 CDS AEJK02000019.1 10170 9712 -3 - 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229909.peg.322 CDS AEJK02000019.1 10913 10233 -2 - 681 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229909.peg.323 CDS AEJK02000019.1 11058 11330 3 + 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229909.peg.324 CDS AEJK02000019.1 12153 11305 -3 - 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229909.peg.325 CDS AEJK02000019.1 13007 12150 -2 - 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229909.peg.326 CDS AEJK02000019.1 13897 13007 -1 - 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229909.peg.327 CDS AEJK02000019.1 14778 13897 -3 - 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229909.peg.328 CDS AEJK02000019.1 15205 14876 -1 - 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) CBSS-326442.4.peg.1852;
Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229909.peg.329 CDS AEJK02000019.1 15953 15291 -2 - 663 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229909.peg.330 CDS AEJK02000019.1 16269 16703 3 + 435 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229909.peg.331 CDS AEJK02000019.1 16816 18519 1 + 1704 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229909.peg.332 CDS AEJK02000019.1 18656 21532 2 + 2877 helicase (Snf2/Rad54 family) - none -
fig|6666666.229909.peg.333 CDS AEJK02000019.1 22140 23081 3 + 942 FIG00807791: hypothetical protein - none -
fig|6666666.229909.peg.334 CDS AEJK02000019.1 23095 24642 1 + 1548 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229909.peg.335 CDS AEJK02000019.1 24824 24967 2 + 144 hypothetical protein - none -
fig|6666666.229909.peg.336 CDS AEJK02000019.1 24951 25985 3 + 1035 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229909.peg.337 CDS AEJK02000019.1 25982 28699 2 + 2718 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229909.peg.338 CDS AEJK02000019.1 28814 29488 2 + 675 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229909.peg.339 CDS AEJK02000019.1 29485 30882 1 + 1398 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229909.peg.340 CDS AEJK02000019.1 30879 31262 3 + 384 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229909.peg.341 CDS AEJK02000019.1 31275 32141 3 + 867 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229909.peg.342 CDS AEJK02000019.1 32286 32936 3 + 651 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229909.peg.343 CDS AEJK02000019.1 33002 33706 2 + 705 hypothetical protein - none -
fig|6666666.229909.peg.344 CDS AEJK02000019.1 34030 34185 1 + 156 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229909.peg.345 CDS AEJK02000019.1 35403 35783 3 + 381 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229909.peg.346 CDS AEJK02000019.1 35805 36809 3 + 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229909.peg.347 CDS AEJK02000019.1 36818 38446 2 + 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229909.peg.348 CDS AEJK02000019.1 38430 39077 3 + 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229909.peg.349 CDS AEJK02000019.1 39123 40127 3 + 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229909.peg.350 CDS AEJK02000019.1 40729 40556 -1 - 174 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229909.peg.351 CDS AEJK02000019.1 40843 41322 1 + 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229909.peg.352 CDS AEJK02000019.1 41326 44070 1 + 2745 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229909.peg.353 CDS AEJK02000019.1 44163 44780 3 + 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229909.peg.354 CDS AEJK02000019.1 44793 46133 3 + 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229909.peg.355 CDS AEJK02000019.1 48297 46630 -3 - 1668 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229909.peg.356 CDS AEJK02000019.1 48604 49920 1 + 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229909.peg.357 CDS AEJK02000019.1 50896 50000 -1 - 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229909.peg.358 CDS AEJK02000019.1 52117 51020 -1 - 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229909.peg.359 CDS AEJK02000019.1 53021 52248 -2 - 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229909.peg.360 CDS AEJK02000019.1 53881 53021 -1 - 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229909.peg.361 CDS AEJK02000019.1 54983 53865 -2 - 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229909.peg.362 CDS AEJK02000019.1 55247 56491 2 + 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229909.peg.363 CDS AEJK02000019.1 58413 56566 -3 - 1848 Paraquat-inducible protein B Oxidative stress
fig|6666666.229909.peg.364 CDS AEJK02000019.1 60398 59115 -2 - 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229909.peg.365 CDS AEJK02000019.1 60616 61227 1 + 612 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229909.peg.366 CDS AEJK02000019.1 61301 63358 2 + 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229909.peg.367 CDS AEJK02000019.1 63436 64944 1 + 1509 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229909.peg.368 CDS AEJK02000019.1 65123 65569 2 + 447 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229909.peg.369 CDS AEJK02000019.1 65646 66284 3 + 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229909.peg.370 CDS AEJK02000019.1 66478 66356 -1 - 123 hypothetical protein - none -
fig|6666666.229909.peg.371 CDS AEJK02000019.1 66563 69370 2 + 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229909.peg.372 CDS AEJK02000019.1 69496 70719 1 + 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229909.peg.373 CDS AEJK02000019.1 70905 72074 3 + 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229909.peg.374 CDS AEJK02000019.1 72085 72957 1 + 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229909.peg.375 CDS AEJK02000020.1 13 648 1 + 636 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229909.peg.376 CDS AEJK02000020.1 1967 717 -2 - 1251 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229909.peg.377 CDS AEJK02000020.1 3365 1980 -2 - 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229909.peg.378 CDS AEJK02000020.1 4142 3396 -2 - 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229909.peg.379 CDS AEJK02000020.1 5082 4156 -3 - 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229909.peg.380 CDS AEJK02000020.1 5238 7739 3 + 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229909.peg.381 CDS AEJK02000020.1 7749 8378 3 + 630 Nitrate/nitrite response regulator protein Nitrate and nitrite ammonification
fig|6666666.229909.peg.382 CDS AEJK02000020.1 8446 10305 1 + 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229909.peg.383 CDS AEJK02000020.1 10333 14214 1 + 3882 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229909.peg.384 CDS AEJK02000020.1 14217 15764 3 + 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229909.peg.385 CDS AEJK02000020.1 17445 15829 -3 - 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.229909.peg.386 CDS AEJK02000020.1 17703 18347 3 + 645 converved hypothetical protein - none -
fig|6666666.229909.peg.387 CDS AEJK02000020.1 18396 19115 3 + 720 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229909.peg.388 CDS AEJK02000020.1 19284 20348 3 + 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229909.peg.389 CDS AEJK02000020.1 20366 20956 2 + 591 FIG01200173: hypothetical protein - none -
fig|6666666.229909.peg.390 CDS AEJK02000020.1 21123 21395 3 + 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229909.peg.391 CDS AEJK02000020.1 21521 22318 2 + 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229909.peg.392 CDS AEJK02000020.1 22372 24204 1 + 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229909.peg.393 CDS AEJK02000020.1 25420 24356 -1 - 1065 FIG01220323: hypothetical protein - none -
fig|6666666.229909.peg.394 CDS AEJK02000020.1 25520 26410 2 + 891 Transcriptional regulator, LysR family - none -
fig|6666666.229909.peg.395 CDS AEJK02000020.1 27658 26549 -1 - 1110 Putative exported protein precursor - none -
fig|6666666.229909.peg.396 CDS AEJK02000020.1 29450 27795 -2 - 1656 Carboxylesterase type B - none -
fig|6666666.229909.peg.397 CDS AEJK02000020.1 30656 29676 -2 - 981 Aldo-keto reductase - none -
fig|6666666.229909.peg.398 CDS AEJK02000020.1 31565 30720 -2 - 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229909.peg.399 CDS AEJK02000020.1 31748 32641 2 + 894 Transcriptional regulator, LysR family - none -
fig|6666666.229909.peg.400 CDS AEJK02000020.1 33545 32730 -2 - 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229909.peg.401 CDS AEJK02000020.1 35382 33883 -3 - 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229909.peg.402 CDS AEJK02000020.1 35508 36176 3 + 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229909.peg.403 CDS AEJK02000020.1 36179 36652 2 + 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229909.peg.404 CDS AEJK02000020.1 36649 37479 1 + 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229909.peg.405 CDS AEJK02000020.1 37476 37910 3 + 435 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229909.peg.406 CDS AEJK02000020.1 38076 39284 3 + 1209 Sodium/glutamate symport protein - none -
fig|6666666.229909.peg.407 CDS AEJK02000020.1 40728 39340 -3 - 1389 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229909.peg.408 CDS AEJK02000020.1 41468 40773 -2 - 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229909.peg.409 CDS AEJK02000020.1 41923 41510 -1 - 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229909.peg.410 CDS AEJK02000020.1 43014 41989 -3 - 1026 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229909.peg.411 CDS AEJK02000020.1 43140 43364 3 + 225 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229909.peg.412 CDS AEJK02000020.1 43369 45108 1 + 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229909.peg.413 CDS AEJK02000020.1 45382 45245 -1 - 138 hypothetical protein - none -
fig|6666666.229909.peg.414 CDS AEJK02000020.1 45368 46357 2 + 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229909.peg.415 CDS AEJK02000020.1 47249 46455 -2 - 795 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229909.peg.416 CDS AEJK02000020.1 47431 47856 1 + 426 Universal stress protein A Universal stress protein family
fig|6666666.229909.peg.417 CDS AEJK02000020.1 48056 50680 2 + 2625 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229909.peg.418 CDS AEJK02000020.1 50803 50985 1 + 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229909.peg.419 CDS AEJK02000020.1 51062 52381 2 + 1320 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229909.peg.420 CDS AEJK02000020.1 52457 53344 2 + 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229909.peg.421 CDS AEJK02000020.1 53533 53814 1 + 282 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229909.peg.422 CDS AEJK02000020.1 53902 53771 -1 - 132 hypothetical protein - none -
fig|6666666.229909.peg.423 CDS AEJK02000020.1 53901 54635 3 + 735 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229909.peg.424 CDS AEJK02000020.1 54653 55210 2 + 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229909.peg.425 CDS AEJK02000020.1 55210 55629 1 + 420 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.229909.peg.426 CDS AEJK02000020.1 57036 55726 -3 - 1311 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.229909.peg.427 CDS AEJK02000020.1 57445 57305 -1 - 141 hypothetical protein - none -
fig|6666666.229909.peg.428 CDS AEJK02000020.1 58827 57676 -3 - 1152 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229909.peg.429 CDS AEJK02000020.1 59345 59088 -2 - 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.430 CDS AEJK02000020.1 60512 59424 -2 - 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229909.peg.431 CDS AEJK02000020.1 60658 60509 -1 - 150 hypothetical protein - none -
fig|6666666.229909.peg.432 CDS AEJK02000020.1 61898 60663 -2 - 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.433 CDS AEJK02000020.1 62506 61910 -1 - 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.434 CDS AEJK02000020.1 63139 62510 -1 - 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.435 CDS AEJK02000020.1 63924 63139 -3 - 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.436 CDS AEJK02000020.1 65152 63917 -1 - 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.437 CDS AEJK02000020.1 66495 65155 -3 - 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.438 CDS AEJK02000020.1 66687 66520 -3 - 168 hypothetical protein - none -
fig|6666666.229909.peg.439 CDS AEJK02000020.1 66841 66725 -1 - 117 hypothetical protein - none -
fig|6666666.229909.peg.440 CDS AEJK02000020.1 67162 66851 -1 - 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229909.peg.441 CDS AEJK02000020.1 67266 67859 3 + 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229909.peg.442 CDS AEJK02000020.1 67965 67840 -3 - 126 hypothetical protein - none -
fig|6666666.229909.peg.443 CDS AEJK02000020.1 69439 68360 -1 - 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229909.peg.444 CDS AEJK02000020.1 69720 69442 -3 - 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229909.peg.445 CDS AEJK02000020.1 70957 69698 -1 - 1260 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229909.peg.446 CDS AEJK02000020.1 71055 71822 3 + 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229909.peg.447 CDS AEJK02000020.1 71852 72193 2 + 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229909.peg.448 CDS AEJK02000020.1 72412 73410 1 + 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229909.peg.449 CDS AEJK02000020.1 73491 75011 3 + 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229909.peg.450 CDS AEJK02000020.1 75027 76085 3 + 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229909.peg.451 CDS AEJK02000020.1 77074 76106 -1 - 969 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229909.peg.452 CDS AEJK02000020.1 77953 77078 -1 - 876 DnaJ-like protein DjlA - none -
fig|6666666.229909.peg.453 CDS AEJK02000020.1 78679 78035 -1 - 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229909.peg.454 CDS AEJK02000020.1 79405 78689 -1 - 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229909.peg.455 CDS AEJK02000020.1 79523 80386 2 + 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229909.peg.456 CDS AEJK02000020.1 80414 81301 2 + 888 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229909.peg.457 CDS AEJK02000020.1 81420 81809 3 + 390 Patatin-like phospholipase - none -
fig|6666666.229909.peg.458 CDS AEJK02000020.1 81884 82606 2 + 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229909.peg.459 CDS AEJK02000020.1 82655 82768 2 + 114 hypothetical protein - none -
fig|6666666.229909.peg.460 CDS AEJK02000020.1 82761 83609 3 + 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229909.peg.461 CDS AEJK02000020.1 83917 84603 1 + 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229909.peg.462 CDS AEJK02000020.1 84605 85921 2 + 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229909.peg.463 CDS AEJK02000020.1 85931 88162 2 + 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229909.peg.464 CDS AEJK02000020.1 88187 88543 2 + 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229909.peg.465 CDS AEJK02000020.1 88559 89218 2 + 660 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229909.peg.466 CDS AEJK02000020.1 90037 89237 -1 - 801 Orf2 - none -
fig|6666666.229909.peg.467 CDS AEJK02000020.1 90076 90201 1 + 126 hypothetical protein - none -
fig|6666666.229909.peg.468 CDS AEJK02000020.1 93289 90191 -1 - 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229909.peg.469 CDS AEJK02000020.1 94499 93303 -2 - 1197 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229909.peg.470 CDS AEJK02000020.1 95091 94525 -3 - 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229909.peg.471 CDS AEJK02000020.1 96125 95292 -2 - 834 Cell division protein - none -
fig|6666666.229909.peg.472 CDS AEJK02000020.1 98433 96235 -3 - 2199 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229909.peg.473 CDS AEJK02000020.1 99317 99451 2 + 135 Involved in lipopolysaccharide biosynthesis - none -
fig|6666666.229909.peg.474 CDS AEJK02000020.1 100462 99458 -1 - 1005 putative capsular polysaccharide synthesis protein - none -
fig|6666666.229909.peg.475 CDS AEJK02000020.1 101319 100471 -3 - 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229909.peg.476 CDS AEJK02000020.1 101577 101789 3 + 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229909.peg.477 CDS AEJK02000020.1 101852 102544 2 + 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229909.peg.478 CDS AEJK02000020.1 102545 103567 2 + 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229909.peg.479 CDS AEJK02000020.1 103577 104629 2 + 1053 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229909.peg.480 CDS AEJK02000020.1 105489 104632 -3 - 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229909.peg.481 CDS AEJK02000020.1 105699 105529 -3 - 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229909.peg.482 CDS AEJK02000020.1 105884 105711 -2 - 174 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.229909.peg.483 CDS AEJK02000020.1 106793 106134 -2 - 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229909.peg.484 CDS AEJK02000020.1 106996 106844 -1 - 153 hypothetical protein - none -
fig|6666666.229909.peg.485 CDS AEJK02000020.1 106971 108170 3 + 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229909.peg.486 CDS AEJK02000020.1 108239 108694 2 + 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229909.peg.487 CDS AEJK02000020.1 108694 109293 1 + 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229909.peg.488 CDS AEJK02000020.1 109317 109535 3 + 219 FIG00696234: hypothetical protein - none -
fig|6666666.229909.peg.489 CDS AEJK02000020.1 109573 110217 1 + 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229909.peg.490 CDS AEJK02000020.1 111720 110350 -3 - 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229909.peg.491 CDS AEJK02000020.1 112660 111815 -1 - 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229909.peg.492 CDS AEJK02000020.1 115181 112755 -2 - 2427 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229909.peg.493 CDS AEJK02000020.1 115440 116249 3 + 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229909.peg.494 CDS AEJK02000020.1 116260 116778 1 + 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229909.peg.495 CDS AEJK02000020.1 116775 117299 3 + 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229909.peg.496 CDS AEJK02000020.1 117299 117691 2 + 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229909.peg.497 CDS AEJK02000020.1 117712 119121 1 + 1410 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229909.peg.498 CDS AEJK02000020.1 119335 119862 1 + 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229909.peg.499 CDS AEJK02000020.1 119886 120974 3 + 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229909.peg.500 CDS AEJK02000020.1 120977 121831 2 + 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229909.peg.501 CDS AEJK02000020.1 122597 122070 -2 - 528 probable integral membrane protein NMA1777 - none -
fig|6666666.229909.peg.502 CDS AEJK02000020.1 122950 122648 -1 - 303 probable integral membrane protein NMA1777 - none -
fig|6666666.229909.peg.503 CDS AEJK02000020.1 123069 122950 -3 - 120 Transcriptional regulator, MarR family - none -
fig|6666666.229909.peg.504 CDS AEJK02000020.1 123393 123085 -3 - 309 Transcriptional regulator, MarR family - none -
fig|6666666.229909.peg.505 CDS AEJK02000020.1 123541 124656 1 + 1116 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.229909.peg.506 CDS AEJK02000020.1 125240 125052 -2 - 189 hypothetical protein - none -
fig|6666666.229909.peg.507 CDS AEJK02000020.1 125407 127578 1 + 2172 Hypothetical SecA-related protein - none -
fig|6666666.229909.peg.508 CDS AEJK02000020.1 127792 128358 1 + 567 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229909.peg.509 CDS AEJK02000020.1 129033 128548 -3 - 486 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229909.peg.510 CDS AEJK02000020.1 129203 132034 2 + 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229909.peg.511 CDS AEJK02000021.1 205 29 -1 - 177 hypothetical protein - none -
fig|6666666.229909.peg.512 CDS AEJK02000021.1 1224 214 -3 - 1011 hypothetical protein - none -
fig|6666666.229909.peg.513 CDS AEJK02000021.1 3377 1227 -2 - 2151 hypothetical protein - none -
fig|6666666.229909.peg.514 CDS AEJK02000021.1 4188 3370 -3 - 819 hypothetical protein - none -
fig|6666666.229909.peg.515 CDS AEJK02000021.1 4706 4527 -2 - 180 hypothetical protein - none -
fig|6666666.229909.peg.516 CDS AEJK02000022.1 313 122 -1 - 192 Mobile element protein - none -
fig|6666666.229909.peg.517 CDS AEJK02000022.1 303 428 3 + 126 hypothetical protein - none -
fig|6666666.229909.peg.518 CDS AEJK02000022.1 640 846 1 + 207 Tfp pilus assembly protein, pilus retraction ATPase PilT - none -
fig|6666666.229909.peg.519 CDS AEJK02000022.1 1289 2458 2 + 1170 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229909.peg.520 CDS AEJK02000022.1 2482 3477 1 + 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229909.peg.521 CDS AEJK02000022.1 3685 3900 1 + 216 Thioredoxin - none -
fig|6666666.229909.peg.522 CDS AEJK02000022.1 5058 4099 -3 - 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229909.peg.523 CDS AEJK02000022.1 5290 5168 -1 - 123 hypothetical protein - none -
fig|6666666.229909.peg.524 CDS AEJK02000022.1 5525 8416 2 + 2892 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229909.peg.525 CDS AEJK02000022.1 9244 8855 -1 - 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229909.peg.526 CDS AEJK02000022.1 11093 9324 -2 - 1770 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229909.peg.527 CDS AEJK02000022.1 11257 11826 1 + 570 Lysine decarboxylase family - none -
fig|6666666.229909.peg.528 CDS AEJK02000022.1 12037 12303 1 + 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229909.peg.529 CDS AEJK02000022.1 12313 12453 1 + 141 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.229909.peg.530 CDS AEJK02000022.1 12715 13422 1 + 708 Aerobic respiration control protein arcA - none -
fig|6666666.229909.peg.531 CDS AEJK02000022.1 14528 13530 -2 - 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229909.peg.532 CDS AEJK02000022.1 15508 14525 -1 - 984 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229909.peg.533 CDS AEJK02000022.1 16456 15518 -1 - 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229909.peg.534 CDS AEJK02000022.1 16612 16466 -1 - 147 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229909.peg.535 CDS AEJK02000022.1 16748 16581 -2 - 168 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229909.peg.536 CDS AEJK02000022.1 17386 16724 -1 - 663 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229909.peg.537 CDS AEJK02000022.1 19112 17529 -2 - 1584 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229909.peg.538 CDS AEJK02000022.1 19135 19272 1 + 138 hypothetical protein - none -
fig|6666666.229909.peg.539 CDS AEJK02000022.1 19481 19963 2 + 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229909.peg.540 CDS AEJK02000022.1 19915 20034 1 + 120 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229909.peg.541 CDS AEJK02000022.1 21206 20031 -2 - 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229909.peg.542 CDS AEJK02000022.1 22160 21243 -2 - 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229909.peg.543 CDS AEJK02000022.1 23170 22238 -1 - 933 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229909.peg.544 CDS AEJK02000022.1 23498 23241 -2 - 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229909.peg.545 CDS AEJK02000022.1 23830 23519 -1 - 312 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229909.peg.546 CDS AEJK02000022.1 24096 25067 3 + 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229909.peg.547 CDS AEJK02000022.1 25069 25800 1 + 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229909.peg.548 CDS AEJK02000022.1 25965 25816 -3 - 150 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) CBSS-87626.3.peg.3639;
Ubiquinone Biosynthesis
fig|6666666.229909.peg.549 CDS AEJK02000022.1 26194 26075 -1 - 120 hypothetical protein - none -
fig|6666666.229909.peg.550 CDS AEJK02000022.1 26302 27726 1 + 1425 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229909.peg.551 CDS AEJK02000022.1 28350 27784 -3 - 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229909.peg.552 CDS AEJK02000022.1 29766 28414 -3 - 1353 Histidine permease YuiF - none -
fig|6666666.229909.peg.553 CDS AEJK02000022.1 30773 30120 -2 - 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229909.peg.554 CDS AEJK02000022.1 31267 30860 -1 - 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229909.peg.555 CDS AEJK02000022.1 33378 31426 -3 - 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229909.peg.556 CDS AEJK02000022.1 33779 35110 2 + 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229909.peg.557 CDS AEJK02000022.1 35253 37820 3 + 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229909.peg.558 CDS AEJK02000022.1 38625 37900 -3 - 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229909.peg.559 CDS AEJK02000022.1 39224 38697 -2 - 528 membrane protein, putative - none -
fig|6666666.229909.peg.560 CDS AEJK02000022.1 39432 41210 3 + 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229909.peg.561 CDS AEJK02000023.1 658 95 -1 - 564 hypothetical protein - none -
fig|6666666.229909.peg.562 CDS AEJK02000023.1 1270 689 -1 - 582 hypothetical protein - none -
fig|6666666.229909.peg.563 CDS AEJK02000023.1 4192 1274 -1 - 2919 hypothetical protein - none -
fig|6666666.229909.peg.564 CDS AEJK02000023.1 4490 4230 -2 - 261 hypothetical protein - none -
fig|6666666.229909.peg.565 CDS AEJK02000025.1 1427 54 -2 - 1374 hypothetical protein - none -
fig|6666666.229909.peg.566 CDS AEJK02000025.1 1817 1482 -2 - 336 hypothetical protein - none -
fig|6666666.229909.peg.567 CDS AEJK02000025.1 2667 1909 -3 - 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229909.peg.568 CDS AEJK02000025.1 3766 2669 -1 - 1098 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) RNA methylation;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229909.peg.569 CDS AEJK02000025.1 4165 3836 -1 - 330 Protein yifE - none -
fig|6666666.229909.peg.570 CDS AEJK02000025.1 4842 4225 -3 - 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229909.peg.571 CDS AEJK02000025.1 5127 4861 -3 - 267 Protein yihD - none -
fig|6666666.229909.peg.572 CDS AEJK02000025.1 5211 5795 3 + 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229909.peg.573 CDS AEJK02000025.1 5894 6424 2 + 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229909.peg.574 CDS AEJK02000025.1 6536 8065 2 + 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229909.peg.575 CDS AEJK02000025.1 8068 9009 1 + 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229909.peg.576 CDS AEJK02000025.1 9014 10678 2 + 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229909.peg.577 CDS AEJK02000025.1 10700 10978 2 + 279 hypothetical protein - none -
fig|6666666.229909.peg.578 CDS AEJK02000025.1 11037 11174 3 + 138 hypothetical protein - none -
fig|6666666.229909.peg.579 CDS AEJK02000025.1 11584 11183 -1 - 402 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229909.peg.580 CDS AEJK02000025.1 11824 12150 1 + 327 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229909.peg.581 CDS AEJK02000025.1 12345 12569 3 + 225 hypothetical protein - none -
fig|6666666.229909.peg.582 CDS AEJK02000025.1 14475 13846 -3 - 630 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - none -
fig|6666666.229909.peg.583 CDS AEJK02000026.1 396 232 -3 - 165 hypothetical protein - none -
fig|6666666.229909.peg.584 CDS AEJK02000026.1 594 1043 3 + 450 ImpA - none -
fig|6666666.229909.peg.585 CDS AEJK02000026.1 1449 1276 -3 - 174 hypothetical protein - none -
fig|6666666.229909.peg.586 CDS AEJK02000026.1 3217 1751 -1 - 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain Purine conversions;
Purine salvage cluster
fig|6666666.229909.peg.587 CDS AEJK02000026.1 3359 4291 2 + 933 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229909.peg.588 CDS AEJK02000026.1 4378 4581 1 + 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229909.peg.589 CDS AEJK02000027.1 2585 228 -2 - 2358 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229909.peg.590 CDS AEJK02000027.1 3448 2705 -1 - 744 Putative membrane protein YeiH - none -
fig|6666666.229909.peg.591 CDS AEJK02000027.1 9659 3888 -2 - 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229909.peg.592 CDS AEJK02000027.1 11173 9725 -1 - 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229909.peg.593 CDS AEJK02000027.1 12330 11470 -3 - 861 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229909.peg.594 CDS AEJK02000027.1 12941 12327 -2 - 615 ABC transporter ATP-binding protein - none -
fig|6666666.229909.peg.595 CDS AEJK02000027.1 13747 12944 -1 - 804 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229909.peg.596 CDS AEJK02000027.1 14450 13716 -2 - 735 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229909.peg.597 CDS AEJK02000027.1 14929 15114 1 + 186 Mobile element protein - none -
fig|6666666.229909.peg.598 CDS AEJK02000027.1 15156 15404 3 + 249 Mobile element protein - none -
fig|6666666.229909.peg.599 CDS AEJK02000027.1 15851 16072 2 + 222 probable transcription regulator - none -
fig|6666666.229909.peg.600 CDS AEJK02000027.1 20589 16321 -3 - 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229909.peg.601 CDS AEJK02000027.1 24720 20692 -3 - 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229909.peg.602 CDS AEJK02000027.1 25362 24991 -3 - 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229909.peg.603 CDS AEJK02000027.1 25905 25414 -3 - 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229909.peg.604 CDS AEJK02000027.1 26246 26076 -2 - 171 hypothetical protein - none -
fig|6666666.229909.peg.605 CDS AEJK02000027.1 26950 26261 -1 - 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229909.peg.606 CDS AEJK02000027.1 27383 26955 -2 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229909.peg.607 CDS AEJK02000027.1 28090 27539 -1 - 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229909.peg.608 CDS AEJK02000027.1 28502 28092 -2 - 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229909.peg.609 CDS AEJK02000027.1 29644 28940 -1 - 705 hypothetical protein - none -
fig|6666666.229909.peg.610 CDS AEJK02000027.1 29958 29704 -3 - 255 Mobile element protein - none -
fig|6666666.229909.peg.611 CDS AEJK02000027.1 30568 30287 -1 - 282 hypothetical protein - none -
fig|6666666.229909.peg.612 CDS AEJK02000028.1 1787 321 -2 - 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229909.peg.613 CDS AEJK02000028.1 3166 2036 -1 - 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229909.peg.614 CDS AEJK02000028.1 5154 3304 -3 - 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229909.peg.615 CDS AEJK02000028.1 6204 5218 -3 - 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229909.peg.616 CDS AEJK02000028.1 6446 7147 2 + 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229909.peg.617 CDS AEJK02000028.1 7161 8048 3 + 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229909.peg.618 CDS AEJK02000028.1 8058 8927 3 + 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229909.peg.619 CDS AEJK02000028.1 8937 9815 3 + 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229909.peg.620 CDS AEJK02000028.1 9970 10773 1 + 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229909.peg.621 CDS AEJK02000028.1 10829 11974 2 + 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229909.peg.622 CDS AEJK02000028.1 12074 12187 2 + 114 hypothetical protein - none -
fig|6666666.229909.peg.623 CDS AEJK02000028.1 12679 12179 -1 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229909.peg.624 CDS AEJK02000028.1 13784 12720 -2 - 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229909.peg.625 CDS AEJK02000028.1 14199 13777 -3 - 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229909.peg.626 CDS AEJK02000028.1 17262 14209 -3 - 3054 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229909.peg.627 CDS AEJK02000028.1 17747 18787 2 + 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229909.peg.628 CDS AEJK02000028.1 19105 19434 1 + 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229909.peg.629 CDS AEJK02000028.1 19557 19444 -3 - 114 hypothetical protein - none -
fig|6666666.229909.peg.630 CDS AEJK02000028.1 19559 20011 2 + 453 putative membrane protein - none -
fig|6666666.229909.peg.631 CDS AEJK02000028.1 20012 20401 2 + 390 COG2363 - none -
fig|6666666.229909.peg.632 CDS AEJK02000028.1 20398 24447 1 + 4050 HrpA-like helicases - none -
fig|6666666.229909.peg.633 CDS AEJK02000028.1 25568 24534 -2 - 1035 ATPase domain protein - none -
fig|6666666.229909.peg.634 CDS AEJK02000028.1 25720 25920 1 + 201 hypothetical protein - none -
fig|6666666.229909.peg.635 CDS AEJK02000028.1 26563 25898 -1 - 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229909.peg.636 CDS AEJK02000028.1 27075 26764 -3 - 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229909.peg.637 CDS AEJK02000028.1 27573 27082 -3 - 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229909.peg.638 CDS AEJK02000028.1 28234 27563 -1 - 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229909.peg.639 CDS AEJK02000028.1 29375 28236 -2 - 1140 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229909.peg.640 CDS AEJK02000028.1 30687 29362 -3 - 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229909.peg.641 CDS AEJK02000028.1 32120 30690 -2 - 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229909.peg.642 CDS AEJK02000028.1 32779 32258 -1 - 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229909.peg.643 CDS AEJK02000028.1 34729 32822 -1 - 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229909.peg.644 CDS AEJK02000028.1 37421 35028 -2 - 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229909.peg.645 CDS AEJK02000028.1 37682 37467 -2 - 216 hypothetical protein - none -
fig|6666666.229909.peg.646 CDS AEJK02000028.1 38025 37684 -3 - 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229909.peg.647 CDS AEJK02000028.1 38159 38959 2 + 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229909.peg.648 CDS AEJK02000028.1 39031 41622 1 + 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229909.peg.649 CDS AEJK02000028.1 42981 41698 -3 - 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229909.peg.650 CDS AEJK02000028.1 43109 44182 2 + 1074 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.229909.peg.651 CDS AEJK02000029.1 280 17 -1 - 264 Phage tail fibers Phage tail fiber proteins
fig|6666666.229909.peg.652 CDS AEJK02000029.1 480 1175 3 + 696 hypothetical protein - none -
fig|6666666.229909.peg.653 CDS AEJK02000029.1 1310 2374 2 + 1065 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229909.peg.654 CDS AEJK02000029.1 2374 3168 1 + 795 Glutathione synthetase (EC 6.3.2.3) Cluster containing Glutathione synthetase;
Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229909.peg.655 CDS AEJK02000029.1 3181 4215 1 + 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229909.peg.656 CDS AEJK02000029.1 4298 4507 2 + 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229909.peg.657 CDS AEJK02000029.1 6723 4627 -3 - 2097 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229909.peg.658 CDS AEJK02000029.1 7022 6720 -2 - 303 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229909.peg.659 CDS AEJK02000029.1 7866 7117 -3 - 750 ABC transporter ATP-binding protein - none -
fig|6666666.229909.peg.660 CDS AEJK02000029.1 8876 7863 -2 - 1014 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229909.peg.661 CDS AEJK02000029.1 9877 8876 -1 - 1002 ABC transporter, solute-binding protein - none -
fig|6666666.229909.peg.662 CDS AEJK02000029.1 10088 10585 2 + 498 FIG00697418: hypothetical protein - none -
fig|6666666.229909.peg.663 CDS AEJK02000029.1 10587 12599 3 + 2013 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229909.peg.664 CDS AEJK02000029.1 13105 12689 -1 - 417 putative membrane protein - none -
fig|6666666.229909.peg.665 CDS AEJK02000029.1 13643 14116 2 + 474 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229909.peg.666 CDS AEJK02000029.1 14133 14633 3 + 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229909.peg.667 CDS AEJK02000029.1 14639 15838 2 + 1200 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Archaea
fig|6666666.229909.peg.668 CDS AEJK02000029.1 15835 16215 1 + 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229909.peg.669 CDS AEJK02000029.1 17687 16257 -2 - 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229909.peg.670 CDS AEJK02000029.1 17801 18736 2 + 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229909.peg.671 CDS AEJK02000029.1 19357 18794 -1 - 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229909.peg.672 CDS AEJK02000029.1 19968 19357 -3 - 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229909.peg.673 CDS AEJK02000029.1 20423 19977 -2 - 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229909.peg.674 CDS AEJK02000029.1 21373 20447 -1 - 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229909.peg.675 CDS AEJK02000029.1 22716 21895 -3 - 822 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229909.peg.676 CDS AEJK02000029.1 23225 23416 2 + 192 hypothetical protein - none -
fig|6666666.229909.peg.677 CDS AEJK02000029.1 23716 23489 -1 - 228 hypothetical protein - none -
fig|6666666.229909.peg.678 CDS AEJK02000029.1 24518 25900 2 + 1383 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229909.peg.679 CDS AEJK02000029.1 27145 25988 -1 - 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229909.peg.680 CDS AEJK02000029.1 28294 27212 -1 - 1083 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229909.peg.681 CDS AEJK02000029.1 28900 28295 -1 - 606 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229909.peg.682 CDS AEJK02000029.1 29500 28943 -1 - 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229909.peg.683 CDS AEJK02000029.1 30254 29532 -2 - 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229909.peg.684 CDS AEJK02000029.1 32194 30257 -1 - 1938 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229909.peg.685 CDS AEJK02000029.1 32270 33088 2 + 819 Aldose 1-epimerase - none -
fig|6666666.229909.peg.686 CDS AEJK02000029.1 34299 33397 -3 - 903 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229909.peg.687 CDS AEJK02000029.1 35668 34385 -1 - 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229909.peg.688 CDS AEJK02000029.1 36863 35745 -2 - 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229909.peg.689 CDS AEJK02000029.1 36894 37007 3 + 114 hypothetical protein - none -
fig|6666666.229909.peg.690 CDS AEJK02000029.1 37319 38509 2 + 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229909.peg.691 CDS AEJK02000029.1 38478 38609 3 + 132 hypothetical protein - none -
fig|6666666.229909.peg.692 CDS AEJK02000029.1 38633 40171 2 + 1539 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229909.peg.693 CDS AEJK02000029.1 40193 41083 2 + 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229909.peg.694 CDS AEJK02000029.1 41177 43228 2 + 2052 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229909.peg.695 CDS AEJK02000029.1 43213 43329 1 + 117 hypothetical protein - none -
fig|6666666.229909.peg.696 CDS AEJK02000029.1 44328 43288 -3 - 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229909.peg.697 CDS AEJK02000029.1 46342 44312 -1 - 2031 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229909.peg.698 CDS AEJK02000029.1 47422 46394 -1 - 1029 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229909.peg.699 CDS AEJK02000029.1 47594 47433 -2 - 162 hypothetical protein - none -
fig|6666666.229909.peg.700 CDS AEJK02000029.1 48676 49065 1 + 390 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System
fig|6666666.229909.peg.701 CDS AEJK02000029.1 49368 51638 3 + 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229909.peg.702 CDS AEJK02000029.1 51673 52734 1 + 1062 hypothetical protein - none -
fig|6666666.229909.peg.703 CDS AEJK02000029.1 52736 53689 2 + 954 hypothetical protein - none -
fig|6666666.229909.peg.704 CDS AEJK02000029.1 53710 54840 1 + 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229909.peg.705 CDS AEJK02000029.1 54862 55131 1 + 270 hypothetical protein - none -
fig|6666666.229909.peg.706 CDS AEJK02000029.1 55201 55449 1 + 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229909.peg.707 CDS AEJK02000029.1 56351 55539 -2 - 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229909.peg.708 CDS AEJK02000029.1 56996 56373 -2 - 624 L-lysine permease - none -
fig|6666666.229909.peg.709 CDS AEJK02000029.1 57496 57005 -1 - 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229909.peg.710 CDS AEJK02000029.1 58489 57506 -1 - 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229909.peg.711 CDS AEJK02000029.1 58933 58508 -1 - 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229909.peg.712 CDS AEJK02000029.1 59413 58940 -1 - 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229909.peg.713 CDS AEJK02000029.1 59656 60540 1 + 885 hypothetical protein - none -
fig|6666666.229909.peg.714 CDS AEJK02000029.1 62510 60861 -2 - 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229909.peg.715 CDS AEJK02000029.1 63608 62526 -2 - 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229909.peg.716 CDS AEJK02000029.1 65038 63632 -1 - 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229909.peg.717 CDS AEJK02000029.1 65053 65175 1 + 123 hypothetical protein - none -
fig|6666666.229909.peg.718 CDS AEJK02000029.1 66263 65184 -2 - 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229909.peg.719 CDS AEJK02000029.1 67614 66364 -3 - 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229909.peg.720 CDS AEJK02000029.1 68300 67614 -2 - 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229909.peg.721 CDS AEJK02000029.1 69499 68315 -1 - 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229909.peg.723 CDS AEJK02000030.1 3741 1519 -3 - 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229909.peg.725 CDS AEJK02000030.1 5088 3874 -3 - 1215 cell filamentation protein Fic-related protein - none -
fig|6666666.229909.peg.726 CDS AEJK02000030.1 5635 5216 -1 - 420 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) Hydrogenases
fig|6666666.229909.peg.727 CDS AEJK02000030.1 6071 5667 -2 - 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229909.peg.728 CDS AEJK02000030.1 6929 6153 -2 - 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229909.peg.729 CDS AEJK02000030.1 7573 6926 -1 - 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229909.peg.730 CDS AEJK02000030.1 9317 7587 -2 - 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229909.peg.731 CDS AEJK02000030.1 10875 9337 -3 - 1539 Hydrogenase-4 component F - none -
fig|6666666.229909.peg.732 CDS AEJK02000030.1 11518 10880 -1 - 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229909.peg.733 CDS AEJK02000030.1 12974 11529 -2 - 1446 Hydrogenase-4 component D (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229909.peg.734 CDS AEJK02000030.1 13952 12987 -2 - 966 Hydrogenase-4 component C (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229909.peg.735 CDS AEJK02000030.1 15981 13960 -3 - 2022 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229909.peg.736 CDS AEJK02000030.1 16614 16015 -3 - 600 Hydrogenase-4 component A - none -
fig|6666666.229909.peg.737 CDS AEJK02000030.1 16907 19192 2 + 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229909.peg.738 CDS AEJK02000030.1 19663 19547 -1 - 117 hypothetical protein - none -
fig|6666666.229909.peg.739 CDS AEJK02000030.1 20526 19813 -3 - 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229909.peg.740 CDS AEJK02000030.1 21349 20519 -1 - 831 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229909.peg.741 CDS AEJK02000030.1 24557 21447 -2 - 3111 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229909.peg.742 CDS AEJK02000030.1 24933 25601 3 + 669 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229909.peg.743 CDS AEJK02000030.1 25650 26648 3 + 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229909.peg.744 CDS AEJK02000030.1 26599 26721 1 + 123 hypothetical protein - none -
fig|6666666.229909.peg.745 CDS AEJK02000030.1 27236 26718 -2 - 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229909.peg.746 CDS AEJK02000030.1 27454 28803 1 + 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229909.peg.747 CDS AEJK02000030.1 28976 31150 2 + 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229909.peg.748 CDS AEJK02000030.1 32109 31282 -3 - 828 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229909.peg.749 CDS AEJK02000030.1 32313 32152 -3 - 162 hypothetical protein - none -
fig|6666666.229909.peg.750 CDS AEJK02000030.1 33029 32286 -2 - 744 Probable transmembrane protein - none -
fig|6666666.229909.peg.751 CDS AEJK02000030.1 33296 33042 -2 - 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.752 CDS AEJK02000030.1 33544 33293 -1 - 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.753 CDS AEJK02000030.1 34609 33653 -1 - 957 Polysaccharide polymerization protein - none -
fig|6666666.229909.peg.754 CDS AEJK02000030.1 36069 34606 -3 - 1464 putative flippase - none -
fig|6666666.229909.peg.755 CDS AEJK02000030.1 36266 37036 2 + 771 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229909.peg.756 CDS AEJK02000030.1 37045 38235 1 + 1191 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase - none -
fig|6666666.229909.peg.757 CDS AEJK02000030.1 38235 39116 3 + 882 Glycosyltransferase - none -
fig|6666666.229909.peg.758 CDS AEJK02000030.1 39209 39994 2 + 786 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229909.peg.759 CDS AEJK02000030.1 40144 39983 -1 - 162 hypothetical protein - none -
fig|6666666.229909.peg.760 CDS AEJK02000030.1 40119 41138 3 + 1020 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229909.peg.761 CDS AEJK02000030.1 41156 41959 2 + 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229909.peg.762 CDS AEJK02000030.1 41959 42747 1 + 789 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase - none -
fig|6666666.229909.peg.763 CDS AEJK02000030.1 42772 43800 1 + 1029 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) - none -
fig|6666666.229909.peg.764 CDS AEJK02000030.1 44702 43962 -2 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229909.peg.765 CDS AEJK02000030.1 45630 44977 -3 - 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229909.peg.766 CDS AEJK02000030.1 45713 46447 2 + 735 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229909.peg.767 CDS AEJK02000030.1 47138 47383 2 + 246 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229909.peg.768 CDS AEJK02000030.1 47676 47440 -3 - 237 Putative lipoprotein yceB precursor - none -
fig|6666666.229909.peg.769 CDS AEJK02000030.1 48025 47699 -1 - 327 Putative lipoprotein yceB precursor - none -
fig|6666666.229909.peg.770 CDS AEJK02000030.1 48113 48748 2 + 636 unknown - none -
fig|6666666.229909.peg.771 CDS AEJK02000030.1 48769 49554 1 + 786 serine/threonine protein kinase - none -
fig|6666666.229909.peg.772 CDS AEJK02000030.1 49551 49679 3 + 129 hypothetical protein - none -
fig|6666666.229909.peg.773 CDS AEJK02000030.1 50695 49763 -1 - 933 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.229909.peg.774 CDS AEJK02000030.1 52679 50946 -2 - 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229909.peg.775 CDS AEJK02000030.1 54514 52679 -1 - 1836 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229909.peg.776 CDS AEJK02000030.1 55501 54548 -1 - 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229909.peg.777 CDS AEJK02000030.1 56418 55561 -3 - 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229909.peg.778 CDS AEJK02000030.1 57869 57138 -2 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229909.peg.779 CDS AEJK02000030.1 59099 57885 -2 - 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229909.peg.780 CDS AEJK02000030.1 59228 59884 2 + 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229909.peg.781 CDS AEJK02000030.1 61427 59985 -2 - 1443 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229909.peg.782 CDS AEJK02000030.1 61587 62063 3 + 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229909.peg.783 CDS AEJK02000030.1 62441 62139 -2 - 303 FIG004454: RNA binding protein - none -
fig|6666666.229909.peg.784 CDS AEJK02000030.1 62609 62908 2 + 300 Phage-related protein - none -
fig|6666666.229909.peg.785 CDS AEJK02000030.1 62905 63201 1 + 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229909.peg.786 CDS AEJK02000030.1 63848 63234 -2 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229909.peg.787 CDS AEJK02000030.1 63875 65272 2 + 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229909.peg.788 CDS AEJK02000030.1 65544 67682 3 + 2139 Ferrichrome-iron receptor - none -
fig|6666666.229909.peg.789 CDS AEJK02000030.1 67736 69481 2 + 1746 Ferrichrome-iron receptor - none -
fig|6666666.229909.peg.790 CDS AEJK02000030.1 70074 69595 -3 - 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229909.peg.791 CDS AEJK02000030.1 70135 71106 1 + 972 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229909.peg.792 CDS AEJK02000030.1 73445 71712 -2 - 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229909.peg.793 CDS AEJK02000030.1 73542 74129 3 + 588 Protein yecM - none -
fig|6666666.229909.peg.794 CDS AEJK02000030.1 74171 74626 2 + 456 Outer membrane lipoprotein - none -
fig|6666666.229909.peg.795 CDS AEJK02000030.1 74767 75849 1 + 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229909.peg.796 CDS AEJK02000030.1 75889 76788 1 + 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229909.peg.797 CDS AEJK02000030.1 76798 77652 1 + 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation;
KDO2-Lipid A biosynthesis
fig|6666666.229909.peg.798 CDS AEJK02000030.1 77832 77954 3 + 123 probable lipoprotein NlpC - none -
fig|6666666.229909.peg.799 CDS AEJK02000030.1 77987 78340 2 + 354 probable lipoprotein NlpC - none -
fig|6666666.229909.peg.800 CDS AEJK02000030.1 78989 78738 -2 - 252 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229909.peg.801 CDS AEJK02000030.1 79073 79735 2 + 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229909.peg.802 CDS AEJK02000030.1 80302 79757 -1 - 546 FIG00696317: hypothetical protein - none -
fig|6666666.229909.peg.803 CDS AEJK02000030.1 80993 80526 -2 - 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229909.peg.804 CDS AEJK02000030.1 82343 81006 -2 - 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229909.peg.805 CDS AEJK02000030.1 84400 83318 -1 - 1083 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229909.peg.806 CDS AEJK02000031.1 849 592 -3 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229909.peg.807 CDS AEJK02000031.1 1040 849 -2 - 192 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.229909.peg.808 CDS AEJK02000031.1 1450 1040 -1 - 411 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.229909.peg.809 CDS AEJK02000031.1 2171 1464 -2 - 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229909.peg.810 CDS AEJK02000031.1 2520 2188 -3 - 333 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.229909.peg.811 CDS AEJK02000031.1 2677 2531 -1 - 147 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229909.peg.812 CDS AEJK02000031.1 3653 2832 -2 - 822 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.229909.peg.813 CDS AEJK02000031.1 3976 3674 -1 - 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.229909.peg.814 CDS AEJK02000031.1 4575 3973 -3 - 603 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.229909.peg.815 CDS AEJK02000031.1 5217 4591 -3 - 627 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.229909.peg.816 CDS AEJK02000031.1 5545 5234 -1 - 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229909.peg.817 CDS AEJK02000031.1 6691 5795 -1 - 897 Transcriptional regulators, LysR family - none -
fig|6666666.229909.peg.818 CDS AEJK02000031.1 7028 7618 2 + 591 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229909.peg.819 CDS AEJK02000031.1 7630 8295 1 + 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229909.peg.820 CDS AEJK02000031.1 8298 9641 3 + 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229909.peg.821 CDS AEJK02000031.1 9659 10831 2 + 1173 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.229909.peg.822 CDS AEJK02000031.1 11396 10929 -2 - 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229909.peg.823 CDS AEJK02000031.1 13016 11487 -2 - 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229909.peg.824 CDS AEJK02000031.1 14065 13133 -1 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229909.peg.825 CDS AEJK02000031.1 15079 14075 -1 - 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229909.peg.826 CDS AEJK02000031.1 15322 16713 1 + 1392 Chloride channel protein - none -
fig|6666666.229909.peg.827 CDS AEJK02000031.1 16716 17699 3 + 984 tRNA dihydrouridine synthase A - none -
fig|6666666.229909.peg.828 CDS AEJK02000031.1 18747 17755 -3 - 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229909.peg.829 CDS AEJK02000031.1 18913 19365 1 + 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229909.peg.830 CDS AEJK02000031.1 19400 20158 2 + 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229909.peg.831 CDS AEJK02000031.1 21354 20293 -3 - 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229909.peg.832 CDS AEJK02000031.1 21428 21778 2 + 351 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229909.peg.833 CDS AEJK02000031.1 21969 21844 -3 - 126 hypothetical protein - none -
fig|6666666.229909.peg.834 CDS AEJK02000031.1 22324 21962 -1 - 363 FIG00696564: hypothetical protein - none -
fig|6666666.229909.peg.835 CDS AEJK02000031.1 22559 22275 -2 - 285 hypothetical protein - none -
fig|6666666.229909.peg.836 CDS AEJK02000031.1 22771 24102 1 + 1332 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229909.peg.837 CDS AEJK02000031.1 24227 24631 2 + 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229909.peg.838 CDS AEJK02000031.1 25644 25048 -3 - 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229909.peg.839 CDS AEJK02000031.1 26458 25739 -1 - 720 probable periplasmic protein NMA1059 - none -
fig|6666666.229909.peg.840 CDS AEJK02000031.1 26943 26509 -3 - 435 Ribonuclease E inhibitor RraB RNA processing and degradation, bacterial
fig|6666666.229909.peg.841 CDS AEJK02000031.1 27433 27038 -1 - 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229909.peg.842 CDS AEJK02000031.1 28919 27543 -2 - 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229909.peg.843 CDS AEJK02000031.1 30298 28943 -1 - 1356 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229909.peg.844 CDS AEJK02000031.1 31257 30298 -3 - 960 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229909.peg.845 CDS AEJK02000031.1 31832 31320 -2 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229909.peg.846 CDS AEJK02000032.1 489 64 -3 - 426 hypothetical protein - none -
fig|6666666.229909.peg.847 CDS AEJK02000034.1 82 261 1 + 180 FIG050068: DNA-binding protein - none -
fig|6666666.229909.peg.848 CDS AEJK02000034.1 1021 371 -1 - 651 Integrase - none -
fig|6666666.229909.peg.849 CDS AEJK02000034.1 1999 2358 1 + 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229909.peg.850 CDS AEJK02000034.1 2358 3050 3 + 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229909.peg.851 CDS AEJK02000034.1 3052 4404 1 + 1353 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.229909.peg.852 CDS AEJK02000034.1 4734 4441 -3 - 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229909.peg.853 CDS AEJK02000034.1 5038 4736 -1 - 303 FIG022160: hypothetical toxin - none -
fig|6666666.229909.peg.854 CDS AEJK02000034.1 5197 5078 -1 - 120 hypothetical protein - none -
fig|6666666.229909.peg.855 CDS AEJK02000034.1 5191 7137 1 + 1947 ABC transporter ATP-binding protein - none -
fig|6666666.229909.peg.856 CDS AEJK02000035.1 533 138 -2 - 396 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229909.peg.857 CDS AEJK02000035.1 1101 535 -3 - 567 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229909.peg.858 CDS AEJK02000035.1 1459 2472 1 + 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229909.peg.859 CDS AEJK02000035.1 2525 3007 2 + 483 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229909.peg.860 CDS AEJK02000035.1 3007 3252 1 + 246 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229909.peg.861 CDS AEJK02000036.1 1067 75 -2 - 993 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229909.peg.862 CDS AEJK02000036.1 1251 1955 3 + 705 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229909.peg.863 CDS AEJK02000036.1 3496 2039 -1 - 1458 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis;
tRNA modification Archaea;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA modification Bacteria
fig|6666666.229909.peg.864 CDS AEJK02000036.1 3794 4900 2 + 1107 Cytochrome c-type protein TorY - none -
fig|6666666.229909.peg.865 CDS AEJK02000036.1 4961 7441 2 + 2481 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229909.peg.866 CDS AEJK02000036.1 8291 7512 -2 - 780 Protein of unknown function DUF419 - none -
fig|6666666.229909.peg.867 CDS AEJK02000036.1 8521 9978 1 + 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229909.peg.868 CDS AEJK02000036.1 10193 10447 2 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.869 CDS AEJK02000036.1 10444 10596 1 + 153 StbE replicon stabilization toxin - none -
fig|6666666.229909.peg.870 CDS AEJK02000036.1 10580 10726 2 + 147 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.871 CDS AEJK02000036.1 11524 10739 -1 - 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229909.peg.872 CDS AEJK02000036.1 12077 11685 -2 - 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229909.peg.873 CDS AEJK02000036.1 12522 12094 -3 - 429 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.229909.peg.874 CDS AEJK02000036.1 13360 12764 -1 - 597 hypothetical protein - none -
fig|6666666.229909.peg.875 CDS AEJK02000036.1 15352 13373 -1 - 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229909.peg.876 CDS AEJK02000036.1 17499 15352 -3 - 2148 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229909.peg.877 CDS AEJK02000036.1 19453 19097 -1 - 357 DsrE-related protein - none -
fig|6666666.229909.peg.878 CDS AEJK02000036.1 20408 19878 -2 - 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229909.peg.879 CDS AEJK02000036.1 22335 20551 -3 - 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229909.peg.880 CDS AEJK02000036.1 22482 22928 3 + 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229909.peg.881 CDS AEJK02000036.1 23204 22995 -2 - 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229909.peg.882 CDS AEJK02000036.1 23559 23395 -3 - 165 hypothetical protein - none -
fig|6666666.229909.peg.883 CDS AEJK02000036.1 24323 23610 -2 - 714 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229909.peg.884 CDS AEJK02000036.1 24634 24320 -1 - 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229909.peg.885 CDS AEJK02000036.1 24742 25524 1 + 783 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229909.peg.886 CDS AEJK02000036.1 25533 26372 3 + 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229909.peg.887 CDS AEJK02000036.1 27674 26424 -2 - 1251 Phosphoglycerate transport system transcriptional regulatory protein PgtA Phosphoglycerate transport system
fig|6666666.229909.peg.888 CDS AEJK02000036.1 28275 27667 -3 - 609 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229909.peg.889 CDS AEJK02000037.1 1078 356 -1 - 723 miscellaneous; hypothetical/partial homology - none -
fig|6666666.229909.peg.890 CDS AEJK02000037.1 1530 1114 -3 - 417 Probable phospholipase protein - none -
fig|6666666.229909.peg.891 CDS AEJK02000038.1 2235 133 -3 - 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229909.peg.892 CDS AEJK02000038.1 2820 2350 -3 - 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229909.peg.893 CDS AEJK02000038.1 3110 2973 -2 - 138 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229909.peg.894 CDS AEJK02000038.1 3405 3289 -3 - 117 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229909.peg.895 CDS AEJK02000038.1 3868 3569 -1 - 300 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229909.peg.896 CDS AEJK02000038.1 4509 4694 3 + 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229909.peg.897 CDS AEJK02000038.1 4727 5608 2 + 882 Protein rarD - none -
fig|6666666.229909.peg.898 CDS AEJK02000038.1 6403 5603 -1 - 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229909.peg.899 CDS AEJK02000038.1 6958 6407 -1 - 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229909.peg.900 CDS AEJK02000038.1 7598 6963 -2 - 636 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229909.peg.901 CDS AEJK02000038.1 7646 9259 2 + 1614 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229909.peg.902 CDS AEJK02000038.1 9280 9933 1 + 654 FIG00903983: hypothetical protein - none -
fig|6666666.229909.peg.903 CDS AEJK02000038.1 9945 10271 3 + 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229909.peg.904 CDS AEJK02000038.1 10597 10283 -1 - 315 Uncharacterized protein PM1437 - none -
fig|6666666.229909.peg.905 CDS AEJK02000038.1 10640 11515 2 + 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229909.peg.906 CDS AEJK02000038.1 11577 12332 3 + 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229909.peg.907 CDS AEJK02000038.1 12667 15123 1 + 2457 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229909.peg.908 CDS AEJK02000038.1 17824 16007 -1 - 1818 ABC transporter ATP-binding protein - none -
fig|6666666.229909.peg.909 CDS AEJK02000038.1 17948 19606 2 + 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229909.peg.910 CDS AEJK02000038.1 19618 19731 1 + 114 hypothetical protein - none -
fig|6666666.229909.peg.911 CDS AEJK02000038.1 19763 20476 2 + 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229909.peg.912 CDS AEJK02000038.1 20544 20687 3 + 144 hypothetical protein - none -
fig|6666666.229909.peg.913 CDS AEJK02000038.1 20701 21258 1 + 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229909.peg.914 CDS AEJK02000038.1 21287 22570 2 + 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229909.peg.915 CDS AEJK02000038.1 22592 23311 2 + 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229909.peg.916 CDS AEJK02000038.1 23326 24195 1 + 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.917 CDS AEJK02000038.1 24204 25538 3 + 1335 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage CBSS-83331.1.peg.3039;
Periplasmic Stress Response
fig|6666666.229909.peg.918 CDS AEJK02000038.1 25557 27968 3 + 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229909.peg.919 CDS AEJK02000038.1 28073 28648 2 + 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229909.peg.920 CDS AEJK02000038.1 28648 29664 1 + 1017 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229909.peg.921 CDS AEJK02000038.1 29806 30216 1 + 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229909.peg.922 CDS AEJK02000038.1 30237 31025 3 + 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229909.peg.923 CDS AEJK02000038.1 31110 32294 3 + 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229909.peg.924 CDS AEJK02000038.1 32287 32886 1 + 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229909.peg.925 CDS AEJK02000038.1 34561 34785 1 + 225 Transporter - none -
fig|6666666.229909.peg.926 CDS AEJK02000038.1 34796 35404 2 + 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.927 CDS AEJK02000038.1 35415 36047 3 + 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.928 CDS AEJK02000038.1 36047 36976 2 + 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.929 CDS AEJK02000038.1 37066 37647 1 + 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229909.peg.930 CDS AEJK02000038.1 38486 37929 -2 - 558 hypothetical protein - none -
fig|6666666.229909.peg.931 CDS AEJK02000038.1 41401 38930 -1 - 2472 hypothetical protein - none -
fig|6666666.229909.peg.932 CDS AEJK02000038.1 41743 41564 -1 - 180 hypothetical protein - none -
fig|6666666.229909.peg.933 CDS AEJK02000038.1 42275 41799 -2 - 477 hypothetical protein - none -
fig|6666666.229909.peg.934 CDS AEJK02000041.1 38 193 2 + 156 hypothetical protein - none -
fig|6666666.229909.peg.935 CDS AEJK02000041.1 754 1464 1 + 711 hypothetical protein - none -
fig|6666666.229909.peg.936 CDS AEJK02000041.1 1647 2591 3 + 945 hypothetical protein - none -
fig|6666666.229909.peg.937 CDS AEJK02000041.1 3158 3790 2 + 633 hypothetical protein - none -
fig|6666666.229909.peg.938 CDS AEJK02000041.1 5371 5237 -1 - 135 Mobile element protein - none -
fig|6666666.229909.peg.939 CDS AEJK02000041.1 5987 6166 2 + 180 hypothetical protein - none -
fig|6666666.229909.peg.940 CDS AEJK02000041.1 7918 6995 -1 - 924 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229909.peg.941 CDS AEJK02000041.1 9550 8246 -1 - 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229909.peg.942 CDS AEJK02000041.1 10437 9736 -3 - 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229909.peg.943 CDS AEJK02000041.1 10458 11156 3 + 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229909.peg.944 CDS AEJK02000041.1 11765 11214 -2 - 552 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229909.peg.945 CDS AEJK02000041.1 12706 11717 -1 - 990 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229909.peg.946 CDS AEJK02000041.1 13232 12894 -2 - 339 FIG00904093: hypothetical protein - none -
fig|6666666.229909.peg.947 CDS AEJK02000041.1 13408 14613 1 + 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229909.peg.948 CDS AEJK02000041.1 14709 16472 3 + 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229909.peg.949 CDS AEJK02000041.1 16642 17052 1 + 411 probable membrane protein YPO3565 - none -
fig|6666666.229909.peg.950 CDS AEJK02000041.1 17180 17010 -2 - 171 hypothetical protein - none -
fig|6666666.229909.peg.951 CDS AEJK02000041.1 17348 18622 2 + 1275 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229909.peg.952 CDS AEJK02000041.1 19883 18813 -2 - 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229909.peg.953 CDS AEJK02000041.1 22152 20110 -3 - 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229909.peg.954 CDS AEJK02000041.1 23795 22764 -2 - 1032 putative membrane protein - none -
fig|6666666.229909.peg.955 CDS AEJK02000041.1 24475 23810 -1 - 666 putative exported protein - none -
fig|6666666.229909.peg.956 CDS AEJK02000041.1 24878 26524 2 + 1647 ABC transporter ATP-binding protein - none -
fig|6666666.229909.peg.957 CDS AEJK02000041.1 27515 26628 -2 - 888 putative adhesin/invasin - none -
fig|6666666.229909.peg.958 CDS AEJK02000041.1 28078 29904 1 + 1827 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229909.peg.959 CDS AEJK02000041.1 30107 29943 -2 - 165 hypothetical protein - none -
fig|6666666.229909.peg.960 CDS AEJK02000041.1 30496 32751 1 + 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229909.peg.961 CDS AEJK02000041.1 33035 33646 2 + 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229909.peg.962 CDS AEJK02000041.1 34535 33711 -2 - 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229909.peg.963 CDS AEJK02000041.1 35783 34725 -2 - 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229909.peg.964 CDS AEJK02000041.1 35976 36566 3 + 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229909.peg.965 CDS AEJK02000041.1 37997 36660 -2 - 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229909.peg.966 CDS AEJK02000041.1 39763 38174 -1 - 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229909.peg.967 CDS AEJK02000041.1 40881 40033 -3 - 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229909.peg.968 CDS AEJK02000041.1 40958 42676 2 + 1719 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229909.peg.969 CDS AEJK02000041.1 42686 43045 2 + 360 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229909.peg.970 CDS AEJK02000041.1 43058 43642 2 + 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229909.peg.971 CDS AEJK02000041.1 43707 44294 3 + 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229909.peg.972 CDS AEJK02000041.1 45092 44400 -2 - 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229909.peg.973 CDS AEJK02000041.1 45309 46379 3 + 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229909.peg.974 CDS AEJK02000041.1 46383 47024 3 + 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229909.peg.975 CDS AEJK02000041.1 47039 47521 2 + 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229909.peg.976 CDS AEJK02000041.1 47847 47653 -3 - 195 Mobile element protein - none -
fig|6666666.229909.peg.977 CDS AEJK02000041.1 48012 47878 -3 - 135 Mobile element protein - none -
fig|6666666.229909.peg.978 CDS AEJK02000041.1 48222 48019 -3 - 204 Mobile element protein - none -
fig|6666666.229909.peg.979 CDS AEJK02000041.1 48350 48523 2 + 174 hypothetical protein - none -
fig|6666666.229909.peg.980 CDS AEJK02000041.1 48805 48659 -1 - 147 hypothetical protein - none -
fig|6666666.229909.peg.981 CDS AEJK02000041.1 48899 50251 2 + 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229909.peg.982 CDS AEJK02000041.1 50281 50466 1 + 186 hypothetical protein - none -
fig|6666666.229909.peg.983 CDS AEJK02000041.1 50507 50779 2 + 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.984 CDS AEJK02000041.1 50791 51057 1 + 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.985 CDS AEJK02000041.1 51089 52648 2 + 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229909.peg.986 CDS AEJK02000041.1 53991 53041 -3 - 951 hypothetical protein - none -
fig|6666666.229909.peg.987 CDS AEJK02000041.1 54565 54185 -1 - 381 Transthyretin-like periplasmic protein - none -
fig|6666666.229909.peg.988 CDS AEJK02000041.1 55773 56726 3 + 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229909.peg.989 CDS AEJK02000041.1 56789 57646 2 + 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229909.peg.990 CDS AEJK02000041.1 57678 59024 3 + 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229909.peg.991 CDS AEJK02000041.1 60383 59052 -2 - 1332 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229909.peg.992 CDS AEJK02000041.1 60894 60508 -3 - 387 Integral membrane protein - none -
fig|6666666.229909.peg.993 CDS AEJK02000041.1 61088 62104 2 + 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization
fig|6666666.229909.peg.994 CDS AEJK02000041.1 62110 62451 1 + 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229909.peg.995 CDS AEJK02000041.1 62458 63747 1 + 1290 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229909.peg.996 CDS AEJK02000041.1 63880 64524 1 + 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229909.peg.997 CDS AEJK02000041.1 64611 64724 3 + 114 hypothetical protein - none -
fig|6666666.229909.peg.998 CDS AEJK02000041.1 66345 64972 -3 - 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229909.peg.999 CDS AEJK02000041.1 67502 66348 -2 - 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229909.peg.1000 CDS AEJK02000041.1 67667 68347 2 + 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229909.peg.1001 CDS AEJK02000041.1 68373 69638 3 + 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229909.peg.1002 CDS AEJK02000041.1 69707 70318 2 + 612 SH3 domain protein - none -
fig|6666666.229909.peg.1003 CDS AEJK02000041.1 70318 71595 1 + 1278 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229909.peg.1004 CDS AEJK02000041.1 71657 72283 2 + 627 Outer membrane lipoprotein LolB A Gammaproteobacteria Cluster Relating to Translation;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229909.peg.1005 CDS AEJK02000041.1 72280 73191 1 + 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229909.peg.1006 CDS AEJK02000041.1 73232 74182 2 + 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229909.peg.1007 CDS AEJK02000041.1 74359 74505 1 + 147 hypothetical protein - none -
fig|6666666.229909.peg.1008 CDS AEJK02000041.1 74806 75951 1 + 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229909.peg.1009 CDS AEJK02000041.1 76193 77782 2 + 1590 L-lactate permease Lactate utilization
fig|6666666.229909.peg.1010 CDS AEJK02000041.1 78269 77937 -2 - 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229909.peg.1011 CDS AEJK02000041.1 78294 78410 3 + 117 hypothetical protein - none -
fig|6666666.229909.peg.1012 CDS AEJK02000041.1 78469 79551 1 + 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229909.peg.1013 CDS AEJK02000041.1 79563 80723 3 + 1161 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229909.peg.1014 CDS AEJK02000041.1 80734 82065 1 + 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229909.peg.1015 CDS AEJK02000041.1 82620 82153 -3 - 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229909.peg.1016 CDS AEJK02000041.1 82688 83449 2 + 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229909.peg.1017 CDS AEJK02000041.1 83901 84155 3 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.1018 CDS AEJK02000041.1 84145 84435 1 + 291 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.1019 CDS AEJK02000041.1 84835 84497 -1 - 339 conserved hypothetical protein - none -
fig|6666666.229909.peg.1020 CDS AEJK02000041.1 85176 85628 3 + 453 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229909.peg.1021 CDS AEJK02000041.1 85799 87187 2 + 1389 Putative protease - none -
fig|6666666.229909.peg.1022 CDS AEJK02000041.1 87309 87422 3 + 114 hypothetical protein - none -
fig|6666666.229909.peg.1023 CDS AEJK02000041.1 87961 88596 1 + 636 transcriptional regulator, putative - none -
fig|6666666.229909.peg.1024 CDS AEJK02000041.1 88737 89021 3 + 285 hypothetical protein - none -
fig|6666666.229909.peg.1025 CDS AEJK02000041.1 89033 90106 2 + 1074 FIG00697578: hypothetical protein - none -
fig|6666666.229909.peg.1026 CDS AEJK02000041.1 90531 91697 3 + 1167 FIG00698381: hypothetical protein - none -
fig|6666666.229909.peg.1027 CDS AEJK02000041.1 92089 93435 1 + 1347 FIG00849539: hypothetical protein - none -
fig|6666666.229909.peg.1028 CDS AEJK02000041.1 93849 94118 3 + 270 ABC-type Fe3+-hydroxamate transport system, periplasmic component - none -
fig|6666666.229909.peg.1029 CDS AEJK02000041.1 94235 94774 2 + 540 hypothetical protein - none -
fig|6666666.229909.peg.1030 CDS AEJK02000041.1 94865 95956 2 + 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229909.peg.1031 CDS AEJK02000041.1 97136 96000 -2 - 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229909.peg.1032 CDS AEJK02000041.1 97331 97200 -2 - 132 hypothetical protein - none -
fig|6666666.229909.peg.1033 CDS AEJK02000041.1 97605 98756 3 + 1152 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229909.peg.1034 CDS AEJK02000041.1 99048 99347 3 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229909.peg.1035 CDS AEJK02000041.1 99378 101228 3 + 1851 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229909.peg.1036 CDS AEJK02000041.1 101245 102210 1 + 966 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229909.peg.1037 CDS AEJK02000041.1 102430 105057 1 + 2628 Iron siderophore receptor protein - none -
fig|6666666.229909.peg.1038 CDS AEJK02000041.1 105276 105136 -3 - 141 hypothetical protein - none -
fig|6666666.229909.peg.1039 CDS AEJK02000041.1 105406 108027 1 + 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229909.peg.1040 CDS AEJK02000041.1 109064 108111 -2 - 954 Inositol transport system permease protein Inositol catabolism
fig|6666666.229909.peg.1041 CDS AEJK02000041.1 110620 109115 -1 - 1506 Inositol transport system ATP-binding protein Inositol catabolism
fig|6666666.229909.peg.1042 CDS AEJK02000041.1 111621 110689 -3 - 933 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229909.peg.1043 CDS AEJK02000041.1 112553 111705 -2 - 849 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229909.peg.1044 CDS AEJK02000041.1 114084 112945 -3 - 1140 Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229909.peg.1045 CDS AEJK02000041.1 115683 114175 -3 - 1509 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) Inositol catabolism
fig|6666666.229909.peg.1046 CDS AEJK02000041.1 115900 116013 1 + 114 hypothetical protein - none -
fig|6666666.229909.peg.1047 CDS AEJK02000041.1 116423 117769 2 + 1347 CRISPR-associated protein, Csy1 family CRISPRs
fig|6666666.229909.peg.1048 CDS AEJK02000041.1 117779 118738 2 + 960 CRISPR-associated protein, Csy2 family CRISPRs
fig|6666666.229909.peg.1049 CDS AEJK02000041.1 118738 119748 1 + 1011 CRISPR-associated protein, Csy3 family CRISPRs
fig|6666666.229909.peg.1050 CDS AEJK02000041.1 119751 120314 3 + 564 CRISPR-associated protein, Csy4 family CRISPRs
fig|6666666.229909.peg.1051 CDS AEJK02000041.1 123647 120360 -2 - 3288 CRISPR-associated helicase Cas3, Yersinia-type CRISPRs
fig|6666666.229909.peg.1052 CDS AEJK02000041.1 124390 123644 -1 - 747 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229909.peg.1053 CDS AEJK02000041.1 124945 125370 1 + 426 Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229909.peg.1054 CDS AEJK02000041.1 125331 126005 3 + 675 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229909.peg.1055 CDS AEJK02000041.1 126128 126985 2 + 858 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229909.peg.1056 CDS AEJK02000041.1 127076 127864 2 + 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229909.peg.1057 CDS AEJK02000041.1 127937 129916 2 + 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229909.peg.1058 CDS AEJK02000041.1 130517 130035 -2 - 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229909.peg.1059 CDS AEJK02000041.1 130725 131195 3 + 471 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229909.peg.1060 CDS AEJK02000041.1 131283 131408 3 + 126 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229909.peg.1061 CDS AEJK02000041.1 131442 131885 3 + 444 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229909.peg.1062 CDS AEJK02000041.1 131898 133412 3 + 1515 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229909.peg.1063 CDS AEJK02000041.1 133556 133837 2 + 282 HipB protein Persister Cells
fig|6666666.229909.peg.1064 CDS AEJK02000041.1 133970 133791 -2 - 180 hypothetical protein - none -
fig|6666666.229909.peg.1065 CDS AEJK02000041.1 134212 134454 1 + 243 HipA protein Persister Cells
fig|6666666.229909.peg.1066 CDS AEJK02000041.1 135344 134451 -2 - 894 hypothetical protein - none -
fig|6666666.229909.peg.1067 CDS AEJK02000041.1 138275 135411 -2 - 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229909.peg.1068 CDS AEJK02000041.1 138661 138347 -1 - 315 RNA-binding domain protein - none -
fig|6666666.229909.peg.1069 CDS AEJK02000041.1 139149 138700 -3 - 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229909.peg.1070 CDS AEJK02000041.1 139359 140753 3 + 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229909.peg.1071 CDS AEJK02000041.1 140857 141462 1 + 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229909.peg.1072 CDS AEJK02000041.1 142675 141758 -1 - 918 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229909.peg.1073 CDS AEJK02000041.1 143416 142682 -1 - 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229909.peg.1074 CDS AEJK02000041.1 143543 143806 2 + 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229909.peg.1075 CDS AEJK02000041.1 144264 144070 -3 - 195 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229909.peg.1076 CDS AEJK02000041.1 144559 145773 1 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229909.peg.1077 CDS AEJK02000041.1 146709 145843 -3 - 867 hypothetical protein - none -
fig|6666666.229909.peg.1078 CDS AEJK02000041.1 147053 146709 -2 - 345 hypothetical protein - none -
fig|6666666.229909.peg.1079 CDS AEJK02000041.1 149144 147066 -2 - 2079 hypothetical protein - none -
fig|6666666.229909.peg.1080 CDS AEJK02000041.1 149533 149165 -1 - 369 hypothetical protein - none -
fig|6666666.229909.peg.1081 CDS AEJK02000041.1 150546 149590 -3 - 957 hypothetical protein - none -
fig|6666666.229909.peg.1082 CDS AEJK02000041.1 151909 151214 -1 - 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229909.peg.1083 CDS AEJK02000041.1 152763 151903 -3 - 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229909.peg.1084 CDS AEJK02000041.1 153553 152804 -1 - 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229909.peg.1085 CDS AEJK02000041.1 154736 153645 -2 - 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229909.peg.1086 CDS AEJK02000041.1 155082 156854 3 + 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229909.peg.1087 CDS AEJK02000041.1 156909 157370 3 + 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229909.peg.1088 CDS AEJK02000041.1 157447 158121 1 + 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229909.peg.1089 CDS AEJK02000041.1 158843 158190 -2 - 654 hypothetical protein - none -
fig|6666666.229909.peg.1090 CDS AEJK02000041.1 159749 158853 -2 - 897 hypothetical protein - none -
fig|6666666.229909.peg.1091 CDS AEJK02000042.1 174 452 3 + 279 hypothetical protein - none -
fig|6666666.229909.peg.1092 CDS AEJK02000044.1 2021 216 -2 - 1806 VgrG-3 protein - none -
fig|6666666.229909.peg.1093 CDS AEJK02000044.1 2025 2186 3 + 162 hypothetical protein - none -
fig|6666666.229909.peg.1094 CDS AEJK02000044.1 2609 2451 -2 - 159 hypothetical protein - none -
fig|6666666.229909.peg.1095 CDS AEJK02000045.1 1019 78 -2 - 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229909.peg.1096 CDS AEJK02000045.1 1182 2669 3 + 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229909.peg.1097 CDS AEJK02000045.1 2685 3713 3 + 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229909.peg.1098 CDS AEJK02000045.1 3719 5176 2 + 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229909.peg.1099 CDS AEJK02000045.1 7539 5224 -3 - 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229909.peg.1100 CDS AEJK02000046.1 161 334 2 + 174 hypothetical protein - none -
fig|6666666.229909.peg.1101 CDS AEJK02000046.1 487 1137 1 + 651 Mobile element protein - none -
fig|6666666.229909.peg.1102 CDS AEJK02000047.1 483 1106 3 + 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229909.peg.1103 CDS AEJK02000047.1 1096 1308 1 + 213 FIG003276: zinc-binding protein - none -
fig|6666666.229909.peg.1104 CDS AEJK02000047.1 1308 1580 3 + 273 FIG00904058: hypothetical protein - none -
fig|6666666.229909.peg.1105 CDS AEJK02000047.1 1977 3350 3 + 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229909.peg.1106 CDS AEJK02000047.1 3579 3902 3 + 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229909.peg.1107 CDS AEJK02000047.1 4357 4605 1 + 249 unknown - none -
fig|6666666.229909.peg.1108 CDS AEJK02000047.1 5519 5220 -2 - 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229909.peg.1109 CDS AEJK02000047.1 6562 5513 -1 - 1050 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229909.peg.1110 CDS AEJK02000047.1 7691 6807 -2 - 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229909.peg.1111 CDS AEJK02000047.1 8246 7704 -2 - 543 Protein involved in cell division - none -
fig|6666666.229909.peg.1112 CDS AEJK02000047.1 9701 8265 -2 - 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229909.peg.1113 CDS AEJK02000047.1 9970 9698 -1 - 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229909.peg.1114 CDS AEJK02000047.1 11382 9994 -3 - 1389 FOG: TPR repeat - none -
fig|6666666.229909.peg.1115 CDS AEJK02000047.1 11698 11501 -1 - 198 hypothetical protein - none -
fig|6666666.229909.peg.1116 CDS AEJK02000047.1 12453 12319 -3 - 135 hypothetical protein - none -
fig|6666666.229909.peg.1117 CDS AEJK02000047.1 13908 12562 -3 - 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229909.peg.1118 CDS AEJK02000047.1 14419 13952 -1 - 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229909.peg.1119 CDS AEJK02000047.1 14436 14588 3 + 153 hypothetical protein - none -
fig|6666666.229909.peg.1120 CDS AEJK02000047.1 15019 14543 -1 - 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229909.peg.1121 CDS AEJK02000047.1 16119 15118 -3 - 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229909.peg.1122 CDS AEJK02000047.1 16429 16100 -1 - 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229909.peg.1123 CDS AEJK02000047.1 16830 16411 -3 - 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229909.peg.1124 CDS AEJK02000047.1 17727 16870 -3 - 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229909.peg.1125 CDS AEJK02000047.1 18606 17839 -3 - 768 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229909.peg.1126 CDS AEJK02000047.1 18779 19222 2 + 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229909.peg.1127 CDS AEJK02000047.1 20663 19296 -2 - 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229909.peg.1128 CDS AEJK02000047.1 21116 20682 -2 - 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229909.peg.1129 CDS AEJK02000047.1 21689 21129 -2 - 561 Protein of unknown function DUF414 - none -
fig|6666666.229909.peg.1130 CDS AEJK02000048.1 203 457 2 + 255 Mobile element protein - none -
fig|6666666.229909.peg.1131 CDS AEJK02000048.1 1272 454 -3 - 819 COG1720: Uncharacterized conserved protein tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229909.peg.1132 CDS AEJK02000048.1 1426 2346 1 + 921 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229909.peg.1133 CDS AEJK02000048.1 2397 2897 3 + 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229909.peg.1134 CDS AEJK02000048.1 3086 4477 2 + 1392 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229909.peg.1135 CDS AEJK02000048.1 5113 4535 -1 - 579 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229909.peg.1136 CDS AEJK02000048.1 5185 6546 1 + 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229909.peg.1137 CDS AEJK02000048.1 6785 7324 2 + 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229909.peg.1138 CDS AEJK02000048.1 8534 7395 -2 - 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229909.peg.1139 CDS AEJK02000048.1 9805 8531 -1 - 1275 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229909.peg.1140 CDS AEJK02000048.1 11040 9937 -3 - 1104 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229909.peg.1141 CDS AEJK02000048.1 11288 11133 -2 - 156 Mobile element protein - none -
fig|6666666.229909.peg.1142 CDS AEJK02000048.1 11345 11956 2 + 612 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229909.peg.1143 CDS AEJK02000048.1 13804 12017 -1 - 1788 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229909.peg.1144 CDS AEJK02000048.1 14833 13931 -1 - 903 Lipoprotein nlpI precursor - none -
fig|6666666.229909.peg.1145 CDS AEJK02000048.1 17149 14918 -1 - 2232 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229909.peg.1146 CDS AEJK02000048.1 17341 17811 1 + 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229909.peg.1147 CDS AEJK02000048.1 18926 18285 -2 - 642 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229909.peg.1148 CDS AEJK02000048.1 18961 19413 1 + 453 Type IV pilin PilA Type IV pilus
fig|6666666.229909.peg.1149 CDS AEJK02000048.1 19440 20849 3 + 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229909.peg.1150 CDS AEJK02000048.1 20842 22065 1 + 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229909.peg.1151 CDS AEJK02000048.1 22065 22751 3 + 687 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229909.peg.1152 CDS AEJK02000049.1 45 278 3 + 234 hypothetical protein - none -
fig|6666666.229909.peg.1153 CDS AEJK02000051.1 321 1307 3 + 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229909.peg.1154 CDS AEJK02000051.1 2004 1291 -3 - 714 SanA protein - none -
fig|6666666.229909.peg.1155 CDS AEJK02000051.1 2197 3300 1 + 1104 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229909.peg.1156 CDS AEJK02000051.1 3606 4604 3 + 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229909.peg.1157 CDS AEJK02000051.1 4906 5040 1 + 135 hypothetical protein - none -
fig|6666666.229909.peg.1158 CDS AEJK02000051.1 5073 5393 3 + 321 putative cytoplasmic protein - none -
fig|6666666.229909.peg.1159 CDS AEJK02000051.1 6335 5508 -2 - 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229909.peg.1160 CDS AEJK02000051.1 7391 6420 -2 - 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229909.peg.1161 CDS AEJK02000051.1 8390 7422 -2 - 969 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229909.peg.1162 CDS AEJK02000051.1 9068 8445 -2 - 624 Hypothetical YciO protein, TsaC/YrdC paralog YrdC-YciO-Sua5 protein family
fig|6666666.229909.peg.1163 CDS AEJK02000051.1 10273 9149 -1 - 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229909.peg.1164 CDS AEJK02000051.1 12194 10314 -2 - 1881 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229909.peg.1165 CDS AEJK02000051.1 12318 12872 3 + 555 FIG002003: Protein YdjA - none -
fig|6666666.229909.peg.1166 CDS AEJK02000051.1 13097 13216 2 + 120 hypothetical protein - none -
fig|6666666.229909.peg.1167 CDS AEJK02000051.1 14783 13302 -2 - 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229909.peg.1168 CDS AEJK02000051.1 16490 14820 -2 - 1671 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229909.peg.1169 CDS AEJK02000051.1 19176 16519 -3 - 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229909.peg.1170 CDS AEJK02000051.1 19555 20430 1 + 876 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229909.peg.1171 CDS AEJK02000051.1 23297 20583 -2 - 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229909.peg.1172 CDS AEJK02000051.1 23466 25856 3 + 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229909.peg.1173 CDS AEJK02000051.1 25959 28034 3 + 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229909.peg.1174 CDS AEJK02000051.1 28056 28181 3 + 126 hypothetical protein - none -
fig|6666666.229909.peg.1175 CDS AEJK02000051.1 28720 28178 -1 - 543 Colicin V production protein - none -
fig|6666666.229909.peg.1176 CDS AEJK02000051.1 29342 28899 -2 - 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229909.peg.1177 CDS AEJK02000051.1 30291 30713 3 + 423 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229909.peg.1178 CDS AEJK02000051.1 30783 32918 3 + 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229909.peg.1179 CDS AEJK02000051.1 33265 33627 1 + 363 hypothetical protein - none -
fig|6666666.229909.peg.1180 CDS AEJK02000051.1 34198 33698 -1 - 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229909.peg.1181 CDS AEJK02000051.1 35657 34191 -2 - 1467 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229909.peg.1182 CDS AEJK02000051.1 36211 35774 -1 - 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229909.peg.1183 CDS AEJK02000051.1 36509 38938 2 + 2430 DNA internalization-related competence protein ComEC/Rec2 KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229909.peg.1184 CDS AEJK02000051.1 38985 40733 3 + 1749 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229909.peg.1185 CDS AEJK02000051.1 40752 41726 3 + 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229909.peg.1186 CDS AEJK02000051.1 41748 41927 3 + 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229909.peg.1187 CDS AEJK02000051.1 41929 42702 1 + 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229909.peg.1188 CDS AEJK02000051.1 42831 44660 3 + 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229909.peg.1189 CDS AEJK02000051.1 44856 44996 3 + 141 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229909.peg.1190 CDS AEJK02000051.1 46138 45047 -1 - 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229909.peg.1191 CDS AEJK02000051.1 47009 46158 -2 - 852 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229909.peg.1192 CDS AEJK02000051.1 47875 47006 -1 - 870 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229909.peg.1193 CDS AEJK02000051.1 48942 47872 -3 - 1071 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229909.peg.1194 CDS AEJK02000051.1 50279 49170 -2 - 1110 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229909.peg.1195 CDS AEJK02000051.1 51639 50791 -3 - 849 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229909.peg.1196 CDS AEJK02000051.1 52148 52267 2 + 120 hypothetical protein - none -
fig|6666666.229909.peg.1197 CDS AEJK02000051.1 52480 52238 -1 - 243 DNA-damage-inducible protein d - none -
fig|6666666.229909.peg.1198 CDS AEJK02000051.1 54085 52661 -1 - 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229909.peg.1199 CDS AEJK02000051.1 55631 54096 -2 - 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229909.peg.1200 CDS AEJK02000051.1 55870 56649 1 + 780 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229909.peg.1201 CDS AEJK02000051.1 56897 58084 2 + 1188 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229909.peg.1202 CDS AEJK02000051.1 58211 58822 2 + 612 hypothetical protein - none -
fig|6666666.229909.peg.1203 CDS AEJK02000051.1 58921 59067 1 + 147 hypothetical protein - none -
fig|6666666.229909.peg.1204 CDS AEJK02000051.1 60029 59109 -2 - 921 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229909.peg.1205 CDS AEJK02000051.1 60415 60029 -1 - 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229909.peg.1206 CDS AEJK02000051.1 61987 60947 -1 - 1041 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229909.peg.1207 CDS AEJK02000051.1 64927 63431 -1 - 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229909.peg.1208 CDS AEJK02000051.1 65410 64955 -1 - 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229909.peg.1209 CDS AEJK02000051.1 66139 66321 1 + 183 hypothetical protein - none -
fig|6666666.229909.peg.1210 CDS AEJK02000052.1 1051 533 -1 - 519 hypothetical protein - none -
fig|6666666.229909.peg.1211 CDS AEJK02000054.1 415 107 -1 - 309 Mobile element protein - none -
fig|6666666.229909.peg.1212 CDS AEJK02000054.1 594 460 -3 - 135 hypothetical protein - none -
fig|6666666.229909.peg.1213 CDS AEJK02000054.1 1729 599 -1 - 1131 hypothetical protein - none -
fig|6666666.229909.peg.1214 CDS AEJK02000054.1 3962 2019 -2 - 1944 hypothetical protein - none -
fig|6666666.229909.peg.1215 CDS AEJK02000054.1 4791 3949 -3 - 843 hypothetical protein - none -
fig|6666666.229909.peg.1216 CDS AEJK02000054.1 5483 5304 -2 - 180 hypothetical protein - none -
fig|6666666.229909.peg.1217 CDS AEJK02000054.1 5688 5524 -3 - 165 hypothetical protein - none -
fig|6666666.229909.peg.1218 CDS AEJK02000054.1 6361 5855 -1 - 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229909.peg.1219 CDS AEJK02000054.1 7058 6573 -2 - 486 Putative membrane protein - none -
fig|6666666.229909.peg.1220 CDS AEJK02000054.1 7666 7061 -1 - 606 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229909.peg.1221 CDS AEJK02000054.1 8268 7666 -3 - 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229909.peg.1222 CDS AEJK02000054.1 8396 8776 2 + 381 FIG00782409: hypothetical protein - none -
fig|6666666.229909.peg.1223 CDS AEJK02000054.1 11307 9292 -3 - 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229909.peg.1224 CDS AEJK02000054.1 11547 11317 -3 - 231 FIG00696102: hypothetical protein - none -
fig|6666666.229909.peg.1225 CDS AEJK02000054.1 12214 11651 -1 - 564 Outer membrane protein 18/16 - none -
fig|6666666.229909.peg.1226 CDS AEJK02000054.1 12431 15232 2 + 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229909.peg.1227 CDS AEJK02000054.1 15738 18158 3 + 2421 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229909.peg.1228 CDS AEJK02000054.1 18169 18786 1 + 618 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229909.peg.1229 CDS AEJK02000054.1 18788 19627 2 + 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229909.peg.1230 CDS AEJK02000054.1 19661 20275 2 + 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229909.peg.1231 CDS AEJK02000054.1 20289 20498 3 + 210 Ferredoxin-type protein NapF (periplasmic nitrate reductase) Nitrate and nitrite ammonification
fig|6666666.229909.peg.1232 CDS AEJK02000054.1 20643 21548 3 + 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229909.peg.1233 CDS AEJK02000054.1 21598 21858 1 + 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229909.peg.1234 CDS AEJK02000054.1 21898 22206 1 + 309 FIG074102: hypothetical protein - none -
fig|6666666.229909.peg.1235 CDS AEJK02000054.1 22328 22666 2 + 339 FIG074102: hypothetical protein - none -
fig|6666666.229909.peg.1236 CDS AEJK02000054.1 22803 22937 3 + 135 hypothetical protein - none -
fig|6666666.229909.peg.1237 CDS AEJK02000054.1 22985 24853 2 + 1869 ATPase family protein - none -
fig|6666666.229909.peg.1238 CDS AEJK02000054.1 24846 26957 3 + 2112 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229909.peg.1239 CDS AEJK02000054.1 28660 27026 -1 - 1635 CTP synthase (EC 6.3.4.2) pyrimidine conversions
fig|6666666.229909.peg.1240 CDS AEJK02000054.1 28774 30189 1 + 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229909.peg.1241 CDS AEJK02000054.1 30368 30499 2 + 132 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Riboflavin synthesis cluster
fig|6666666.229909.peg.1242 CDS AEJK02000054.1 31270 30686 -1 - 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229909.peg.1243 CDS AEJK02000054.1 32068 31382 -1 - 687 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.229909.peg.1244 CDS AEJK02000054.1 32214 33026 3 + 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229909.peg.1245 CDS AEJK02000054.1 33210 34322 3 + 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229909.peg.1246 CDS AEJK02000054.1 34977 34396 -3 - 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229909.peg.1247 CDS AEJK02000054.1 35242 37812 1 + 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229909.peg.1248 CDS AEJK02000054.1 37940 37791 -2 - 150 hypothetical protein - none -
fig|6666666.229909.peg.1249 CDS AEJK02000054.1 38254 37913 -1 - 342 hypothetical protein - none -
fig|6666666.229909.peg.1250 CDS AEJK02000054.1 38557 39585 1 + 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229909.peg.1251 CDS AEJK02000054.1 39585 39764 3 + 180 hypothetical protein - none -
fig|6666666.229909.peg.1252 CDS AEJK02000054.1 39843 40667 3 + 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229909.peg.1253 CDS AEJK02000054.1 40677 41567 3 + 891 Tyrosine recombinase XerC - none -
fig|6666666.229909.peg.1254 CDS AEJK02000054.1 41582 42295 2 + 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229909.peg.1255 CDS AEJK02000054.1 42822 42397 -3 - 426 Excinuclease ATPase subunit - none -
fig|6666666.229909.peg.1256 CDS AEJK02000054.1 43203 43946 3 + 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1257 CDS AEJK02000054.1 43931 44719 2 + 789 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1258 CDS AEJK02000054.1 44697 44960 3 + 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1259 CDS AEJK02000054.1 44963 45214 2 + 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1260 CDS AEJK02000054.1 45214 46881 1 + 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1261 CDS AEJK02000054.1 46907 47452 2 + 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1262 CDS AEJK02000054.1 47512 48810 1 + 1299 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1263 CDS AEJK02000054.1 48810 49532 3 + 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1264 CDS AEJK02000054.1 49529 50455 2 + 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1265 CDS AEJK02000054.1 50452 50898 1 + 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1266 CDS AEJK02000054.1 50895 51479 3 + 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1267 CDS AEJK02000054.1 51486 53759 3 + 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1268 CDS AEJK02000054.1 53889 54368 3 + 480 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1269 CDS AEJK02000054.1 54377 55600 2 + 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1270 CDS AEJK02000054.1 55593 56036 3 + 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1271 CDS AEJK02000054.1 56086 56814 1 + 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1272 CDS AEJK02000054.1 56845 58089 1 + 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229909.peg.1273 CDS AEJK02000055.1 1215 40 -3 - 1176 hypothetical protein - none -
fig|6666666.229909.peg.1274 CDS AEJK02000055.1 3527 1236 -2 - 2292 hypothetical protein - none -
fig|6666666.229909.peg.1275 CDS AEJK02000055.1 4141 3509 -1 - 633 hypothetical protein - none -
fig|6666666.229909.peg.1276 CDS AEJK02000055.1 4463 4152 -2 - 312 hypothetical protein - none -
fig|6666666.229909.peg.1277 CDS AEJK02000056.1 212 96 -2 - 117 hypothetical protein - none -
fig|6666666.229909.peg.1278 CDS AEJK02000056.1 893 234 -2 - 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229909.peg.1279 CDS AEJK02000056.1 1274 1963 2 + 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229909.peg.1280 CDS AEJK02000056.1 2736 2038 -3 - 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229909.peg.1281 CDS AEJK02000056.1 2848 2720 -1 - 129 hypothetical protein - none -
fig|6666666.229909.peg.1282 CDS AEJK02000056.1 2835 4166 3 + 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229909.peg.1283 CDS AEJK02000056.1 4546 5850 1 + 1305 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229909.peg.1284 CDS AEJK02000057.1 1197 55 -3 - 1143 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229909.peg.1285 CDS AEJK02000058.1 379 191 -1 - 189 VgrG-3 protein - none -
fig|6666666.229909.peg.1286 CDS AEJK02000058.1 1265 1561 2 + 297 Predicted transcriptional regulator of the myo-inositol catabolic operon Inositol catabolism
fig|6666666.229909.peg.1287 CDS AEJK02000058.1 3508 1598 -1 - 1911 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain Inositol catabolism;
Inositol catabolism
fig|6666666.229909.peg.1288 CDS AEJK02000058.1 3819 5765 3 + 1947 Epi-inositol hydrolase (EC 3.7.1.-) Inositol catabolism
fig|6666666.229909.peg.1289 CDS AEJK02000058.1 5820 6716 3 + 897 Inosose dehydratase (EC 4.2.1.44) Inositol catabolism
fig|6666666.229909.peg.1290 CDS AEJK02000058.1 6719 7729 2 + 1011 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229909.peg.1291 CDS AEJK02000058.1 8345 7833 -2 - 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229909.peg.1292 CDS AEJK02000058.1 9571 8423 -1 - 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229909.peg.1293 CDS AEJK02000058.1 11529 9649 -3 - 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229909.peg.1294 CDS AEJK02000058.1 12551 11940 -2 - 612 RTX toxin transporter, determinant D - none -
fig|6666666.229909.peg.1295 CDS AEJK02000059.1 640 83 -1 - 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229909.peg.1296 CDS AEJK02000059.1 836 1873 2 + 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229909.peg.1297 CDS AEJK02000059.1 1863 2540 3 + 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229909.peg.1298 CDS AEJK02000059.1 2575 3417 1 + 843 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229909.peg.1299 CDS AEJK02000059.1 3523 4020 1 + 498 Phospholipid-binding protein - none -
fig|6666666.229909.peg.1300 CDS AEJK02000059.1 4139 4615 2 + 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) Biotin synthesis cluster;
RNA methylation
fig|6666666.229909.peg.1301 CDS AEJK02000059.1 5586 4711 -3 - 876 Membrane protein LAPB - none -
fig|6666666.229909.peg.1302 CDS AEJK02000059.1 5719 6333 1 + 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229909.peg.1303 CDS AEJK02000059.1 6448 7983 1 + 1536 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.229909.peg.1304 CDS AEJK02000059.1 8822 7995 -2 - 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229909.peg.1305 CDS AEJK02000059.1 10036 8819 -1 - 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229909.peg.1306 CDS AEJK02000059.1 11944 10286 -1 - 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229909.peg.1307 CDS AEJK02000059.1 12251 12934 2 + 684 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229909.peg.1308 CDS AEJK02000060.1 30 143 3 + 114 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229909.peg.1309 CDS AEJK02000060.1 343 984 1 + 642 Stringent starvation protein A Carbon Starvation
fig|6666666.229909.peg.1310 CDS AEJK02000060.1 996 1457 3 + 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229909.peg.1311 CDS AEJK02000060.1 3023 1620 -2 - 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn;
tRNA modification Archaea
fig|6666666.229909.peg.1312 CDS AEJK02000060.1 3219 4448 3 + 1230 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229909.peg.1313 CDS AEJK02000060.1 4525 5253 1 + 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229909.peg.1314 CDS AEJK02000060.1 6917 5343 -2 - 1575 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229909.peg.1315 CDS AEJK02000060.1 7931 6966 -2 - 966 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229909.peg.1316 CDS AEJK02000060.1 8175 9692 3 + 1518 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229909.peg.1317 CDS AEJK02000060.1 9701 10732 2 + 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229909.peg.1318 CDS AEJK02000060.1 10746 11750 3 + 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229909.peg.1319 CDS AEJK02000060.1 11775 12872 3 + 1098 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229909.peg.1320 CDS AEJK02000060.1 12891 13769 3 + 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229909.peg.1321 CDS AEJK02000060.1 13802 14104 2 + 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229909.peg.1322 CDS AEJK02000060.1 15620 14208 -2 - 1413 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229909.peg.1323 CDS AEJK02000060.1 16895 15906 -2 - 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229909.peg.1324 CDS AEJK02000060.1 18711 17026 -3 - 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229909.peg.1325 CDS AEJK02000060.1 19793 18987 -2 - 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229909.peg.1326 CDS AEJK02000060.1 20989 19796 -1 - 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229909.peg.1327 CDS AEJK02000060.1 21736 20999 -1 - 738 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229909.peg.1328 CDS AEJK02000060.1 21724 21936 1 + 213 hypothetical protein - none -
fig|6666666.229909.peg.1329 CDS AEJK02000060.1 22442 24886 2 + 2445 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229909.peg.1330 CDS AEJK02000060.1 25278 25081 -3 - 198 hypothetical protein - none -
fig|6666666.229909.peg.1331 CDS AEJK02000060.1 26594 25290 -2 - 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229909.peg.1332 CDS AEJK02000060.1 28401 26605 -3 - 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229909.peg.1333 CDS AEJK02000060.1 28683 28417 -3 - 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229909.peg.1334 CDS AEJK02000060.1 29346 29465 3 + 120 hypothetical protein - none -
fig|6666666.229909.peg.1335 CDS AEJK02000060.1 29983 29708 -1 - 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229909.peg.1336 CDS AEJK02000060.1 31823 30393 -2 - 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229909.peg.1337 CDS AEJK02000060.1 32110 31832 -1 - 279 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.1338 CDS AEJK02000060.1 32398 32120 -1 - 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.1339 CDS AEJK02000060.1 33494 32493 -2 - 1002 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229909.peg.1340 CDS AEJK02000060.1 33898 33506 -1 - 393 putative - none -
fig|6666666.229909.peg.1341 CDS AEJK02000060.1 34562 33972 -2 - 591 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229909.peg.1342 CDS AEJK02000060.1 36120 34573 -3 - 1548 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229909.peg.1343 CDS AEJK02000060.1 36840 36286 -3 - 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) KDO2-Lipid A biosynthesis
fig|6666666.229909.peg.1344 CDS AEJK02000060.1 37775 36840 -2 - 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) KDO2-Lipid A biosynthesis
fig|6666666.229909.peg.1345 CDS AEJK02000060.1 38421 38272 -3 - 150 hypothetical protein - none -
fig|6666666.229909.peg.1346 CDS AEJK02000060.1 39547 40536 1 + 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229909.peg.1347 CDS AEJK02000060.1 40556 42946 2 + 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229909.peg.1348 CDS AEJK02000060.1 42950 43246 2 + 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229909.peg.1349 CDS AEJK02000061.1 344 490 2 + 147 hypothetical protein - none -
fig|6666666.229909.peg.1350 CDS AEJK02000063.1 20 436 2 + 417 Probable phospholipase protein - none -
fig|6666666.229909.peg.1351 CDS AEJK02000064.1 231 902 3 + 672 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229909.peg.1352 CDS AEJK02000064.1 930 1679 3 + 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229909.peg.1353 CDS AEJK02000064.1 1817 2908 2 + 1092 Putative exported protein precursor - none -
fig|6666666.229909.peg.1354 CDS AEJK02000064.1 4410 3040 -3 - 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229909.peg.1355 CDS AEJK02000064.1 4496 5626 2 + 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229909.peg.1356 CDS AEJK02000064.1 5623 6537 1 + 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229909.peg.1357 CDS AEJK02000064.1 6702 7748 3 + 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229909.peg.1358 CDS AEJK02000064.1 8237 7809 -2 - 429 ATP synthase epsilon chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229909.peg.1359 CDS AEJK02000064.1 9652 8279 -1 - 1374 ATP synthase beta chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229909.peg.1360 CDS AEJK02000064.1 10538 9669 -2 - 870 ATP synthase gamma chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229909.peg.1361 CDS AEJK02000064.1 12095 10554 -2 - 1542 ATP synthase alpha chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229909.peg.1362 CDS AEJK02000064.1 12656 12108 -2 - 549 ATP synthase delta chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229909.peg.1363 CDS AEJK02000064.1 13077 12670 -3 - 408 ATP synthase F0 sector subunit b (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229909.peg.1364 CDS AEJK02000064.1 13444 13190 -1 - 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229909.peg.1365 CDS AEJK02000064.1 14284 13496 -1 - 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229909.peg.1366 CDS AEJK02000064.1 14686 14309 -1 - 378 FIG048548: ATP synthase protein I2 F0F1-type ATP synthase
fig|6666666.229909.peg.1367 CDS AEJK02000064.1 15481 14798 -1 - 684 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229909.peg.1368 CDS AEJK02000064.1 15836 15474 -2 - 363 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229909.peg.1369 CDS AEJK02000064.1 15988 16158 1 + 171 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229909.peg.1370 CDS AEJK02000064.1 16143 16844 3 + 702 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229909.peg.1371 CDS AEJK02000064.1 16998 17114 3 + 117 hypothetical protein - none -
fig|6666666.229909.peg.1372 CDS AEJK02000064.1 19005 17116 -3 - 1890 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229909.peg.1373 CDS AEJK02000064.1 19877 19434 -2 - 444 Flavoprotein MioC Flavodoxin
fig|6666666.229909.peg.1374 CDS AEJK02000064.1 20152 19934 -1 - 219 FIG074102: hypothetical protein - none -
fig|6666666.229909.peg.1375 CDS AEJK02000064.1 20348 21361 2 + 1014 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229909.peg.1376 CDS AEJK02000064.1 21803 21399 -2 - 405 hypothetical protein - none -
fig|6666666.229909.peg.1377 CDS AEJK02000064.1 21824 21955 2 + 132 hypothetical protein - none -
fig|6666666.229909.peg.1378 CDS AEJK02000064.1 22800 22003 -3 - 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229909.peg.1379 CDS AEJK02000064.1 23816 22803 -2 - 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.1380 CDS AEJK02000064.1 24406 23900 -1 - 507 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229909.peg.1381 CDS AEJK02000064.1 24928 24422 -1 - 507 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229909.peg.1382 CDS AEJK02000064.1 25189 26511 1 + 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229909.peg.1383 CDS AEJK02000064.1 26681 28429 2 + 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229909.peg.1384 CDS AEJK02000064.1 28446 30080 3 + 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229909.peg.1385 CDS AEJK02000064.1 30811 30191 -1 - 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229909.peg.1386 CDS AEJK02000064.1 31722 30823 -3 - 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229909.peg.1387 CDS AEJK02000064.1 31881 32609 3 + 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229909.peg.1388 CDS AEJK02000064.1 32885 32670 -2 - 216 Protein SlyX - none -
fig|6666666.229909.peg.1389 CDS AEJK02000064.1 32980 33705 1 + 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229909.peg.1390 CDS AEJK02000064.1 33785 34453 2 + 669 YheO-like PAS domain - none -
fig|6666666.229909.peg.1391 CDS AEJK02000064.1 34457 34834 2 + 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229909.peg.1392 CDS AEJK02000064.1 34831 35193 1 + 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229909.peg.1393 CDS AEJK02000064.1 35193 35483 3 + 291 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229909.peg.1394 CDS AEJK02000064.1 36255 35488 -3 - 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229909.peg.1395 CDS AEJK02000064.1 36987 36265 -3 - 723 L-Cystine ABC transporter, permease protein TcyB - none -
fig|6666666.229909.peg.1396 CDS AEJK02000064.1 37750 36971 -1 - 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229909.peg.1397 CDS AEJK02000064.1 39171 37876 -3 - 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229909.peg.1398 CDS AEJK02000064.1 40661 39297 -2 - 1365 lipoprotein, putative - none -
fig|6666666.229909.peg.1399 CDS AEJK02000064.1 40830 40708 -3 - 123 hypothetical protein - none -
fig|6666666.229909.peg.1400 CDS AEJK02000064.1 41024 41242 2 + 219 hypothetical protein - none -
fig|6666666.229909.peg.1401 CDS AEJK02000064.1 42413 41451 -2 - 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229909.peg.1402 CDS AEJK02000064.1 43116 42478 -3 - 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229909.peg.1403 CDS AEJK02000064.1 43461 43162 -3 - 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229909.peg.1404 CDS AEJK02000064.1 44701 43511 -1 - 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229909.peg.1405 CDS AEJK02000064.1 45589 44732 -1 - 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229909.peg.1406 CDS AEJK02000064.1 46759 45638 -1 - 1122 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229909.peg.1407 CDS AEJK02000064.1 48707 46746 -2 - 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229909.peg.1408 CDS AEJK02000064.1 49256 48720 -2 - 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229909.peg.1409 CDS AEJK02000064.1 49555 49247 -1 - 309 Iojap protein - none -
fig|6666666.229909.peg.1410 CDS AEJK02000064.1 50878 49622 -1 - 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229909.peg.1411 CDS AEJK02000064.1 51203 52441 2 + 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229909.peg.1412 CDS AEJK02000064.1 53801 52566 -2 - 1236 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229909.peg.1413 CDS AEJK02000064.1 53881 54021 1 + 141 hypothetical protein - none -
fig|6666666.229909.peg.1414 CDS AEJK02000064.1 54260 54030 -2 - 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.1415 CDS AEJK02000064.1 55261 54533 -1 - 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229909.peg.1416 CDS AEJK02000064.1 56224 55286 -1 - 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229909.peg.1417 CDS AEJK02000064.1 57281 56331 -2 - 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229909.peg.1418 CDS AEJK02000064.1 58347 57328 -3 - 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.1419 CDS AEJK02000064.1 58544 58374 -2 - 171 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.229909.peg.1420 CDS AEJK02000064.1 59085 58561 -3 - 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229909.peg.1421 CDS AEJK02000064.1 59798 59157 -2 - 642 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229909.peg.1422 CDS AEJK02000064.1 60538 59798 -1 - 741 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229909.peg.1423 CDS AEJK02000064.1 61206 60556 -3 - 651 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229909.peg.1424 CDS AEJK02000064.1 62362 61187 -1 - 1176 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229909.peg.1425 CDS AEJK02000064.1 63644 62355 -2 - 1290 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229909.peg.1426 CDS AEJK02000064.1 63867 64736 3 + 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.1427 CDS AEJK02000064.1 64762 65394 1 + 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229909.peg.1428 CDS AEJK02000064.1 66118 65459 -1 - 660 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229909.peg.1429 CDS AEJK02000064.1 66278 66099 -2 - 180 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229909.peg.1430 CDS AEJK02000064.1 66429 67214 3 + 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229909.peg.1431 CDS AEJK02000064.1 67216 67680 1 + 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229909.peg.1432 CDS AEJK02000064.1 67720 68205 1 + 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229909.peg.1433 CDS AEJK02000064.1 68687 68556 -2 - 132 hypothetical protein - none -
fig|6666666.229909.peg.1434 CDS AEJK02000064.1 69178 68999 -1 - 180 hypothetical protein - none -
fig|6666666.229909.peg.1435 CDS AEJK02000065.1 374 18 -2 - 357 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229909.peg.1436 CDS AEJK02000065.1 373 489 1 + 117 hypothetical protein - none -
fig|6666666.229909.peg.1437 CDS AEJK02000065.1 782 486 -2 - 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.1438 CDS AEJK02000065.1 929 792 -2 - 138 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.1439 CDS AEJK02000065.1 1807 1190 -1 - 618 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229909.peg.1440 CDS AEJK02000066.1 251 3055 2 + 2805 hypothetical protein - none -
fig|6666666.229909.peg.1441 CDS AEJK02000066.1 3095 3925 2 + 831 hypothetical protein - none -
fig|6666666.229909.peg.1442 CDS AEJK02000066.1 4071 4193 3 + 123 hypothetical protein - none -
fig|6666666.229909.peg.1443 CDS AEJK02000067.1 1445 492 -2 - 954 Glycosyltransferase - none -
fig|6666666.229909.peg.1444 CDS AEJK02000067.1 2479 1589 -1 - 891 hypothetical protein - none -
fig|6666666.229909.peg.1445 CDS AEJK02000067.1 3006 2482 -3 - 525 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229909.peg.1446 CDS AEJK02000067.1 4526 3123 -2 - 1404 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229909.peg.1447 CDS AEJK02000067.1 5170 4559 -1 - 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229909.peg.1448 CDS AEJK02000067.1 6148 5192 -1 - 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229909.peg.1449 CDS AEJK02000067.1 7031 6264 -2 - 768 Putative membrane protein YfcA - none -
fig|6666666.229909.peg.1450 CDS AEJK02000067.1 7907 7035 -2 - 873 Murein endopeptidase - none -
fig|6666666.229909.peg.1451 CDS AEJK02000067.1 9001 7928 -1 - 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229909.peg.1452 CDS AEJK02000067.1 12346 9023 -1 - 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229909.peg.1453 CDS AEJK02000067.1 13770 12355 -3 - 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229909.peg.1454 CDS AEJK02000067.1 14393 13776 -2 - 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229909.peg.1455 CDS AEJK02000067.1 14480 15280 2 + 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229909.peg.1456 CDS AEJK02000067.1 15700 16224 1 + 525 Flavodoxin 1 Flavodoxin
fig|6666666.229909.peg.1457 CDS AEJK02000067.1 16243 16683 1 + 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229909.peg.1458 CDS AEJK02000067.1 16851 19514 3 + 2664 DNA gyrase subunit A (EC 5.99.1.3) DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229909.peg.1459 CDS AEJK02000067.1 19582 19932 1 + 351 FIG00782386: hypothetical protein - none -
fig|6666666.229909.peg.1460 CDS AEJK02000067.1 20283 19966 -3 - 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229909.peg.1461 CDS AEJK02000067.1 20981 20289 -2 - 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229909.peg.1462 CDS AEJK02000067.1 22147 21011 -1 - 1137 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229909.peg.1463 CDS AEJK02000067.1 22497 22201 -3 - 297 Inner membrane protein yciS - none -
fig|6666666.229909.peg.1464 CDS AEJK02000067.1 22883 22596 -2 - 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229909.peg.1465 CDS AEJK02000067.1 24591 22945 -3 - 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229909.peg.1466 CDS AEJK02000067.1 25366 24689 -1 - 678 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229909.peg.1467 CDS AEJK02000067.1 26252 25359 -2 - 894 Membrane protein LAPB - none -
fig|6666666.229909.peg.1468 CDS AEJK02000067.1 26545 28911 1 + 2367 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229909.peg.1469 CDS AEJK02000067.1 28989 31763 3 + 2775 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229909.peg.1470 CDS AEJK02000067.1 32033 31830 -2 - 204 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229909.peg.1471 CDS AEJK02000067.1 33777 32845 -3 - 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229909.peg.1472 CDS AEJK02000067.1 34068 36344 3 + 2277 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229909.peg.1473 CDS AEJK02000067.1 36828 36682 -3 - 147 hypothetical protein - none -
fig|6666666.229909.peg.1474 CDS AEJK02000067.1 37467 37174 -3 - 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229909.peg.1475 CDS AEJK02000067.1 38484 37471 -3 - 1014 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229909.peg.1476 CDS AEJK02000067.1 39791 38532 -2 - 1260 hypothetical protein - none -
fig|6666666.229909.peg.1477 CDS AEJK02000067.1 40376 39846 -2 - 531 hypothetical protein - none -
fig|6666666.229909.peg.1478 CDS AEJK02000067.1 41086 40439 -1 - 648 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229909.peg.1479 CDS AEJK02000067.1 42155 41262 -2 - 894 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229909.peg.1480 CDS AEJK02000067.1 44210 42177 -2 - 2034 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229909.peg.1481 CDS AEJK02000067.1 44986 44207 -1 - 780 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229909.peg.1482 CDS AEJK02000067.1 47460 44995 -3 - 2466 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229909.peg.1483 CDS AEJK02000067.1 47660 50593 2 + 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229909.peg.1484 CDS AEJK02000067.1 50928 50629 -3 - 300 Putative transcriptional regulator - none -
fig|6666666.229909.peg.1485 CDS AEJK02000067.1 51275 50925 -2 - 351 YPPCP.09C homologue - none -
fig|6666666.229909.peg.1486 CDS AEJK02000067.1 53045 51462 -2 - 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229909.peg.1487 CDS AEJK02000067.1 53115 53231 3 + 117 hypothetical protein - none -
fig|6666666.229909.peg.1488 CDS AEJK02000067.1 53402 54229 2 + 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229909.peg.1489 CDS AEJK02000067.1 54317 55654 2 + 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229909.peg.1490 CDS AEJK02000067.1 55845 56090 3 + 246 FIG00696862: hypothetical protein - none -
fig|6666666.229909.peg.1491 CDS AEJK02000067.1 56323 58092 1 + 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229909.peg.1492 CDS AEJK02000067.1 59159 58218 -2 - 942 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229909.peg.1493 CDS AEJK02000067.1 59612 59184 -2 - 429 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229909.peg.1494 CDS AEJK02000067.1 60027 59581 -3 - 447 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229909.peg.1495 CDS AEJK02000067.1 60241 59996 -1 - 246 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229909.peg.1496 CDS AEJK02000067.1 60795 60379 -3 - 417 Protein ygiW precursor - none -
fig|6666666.229909.peg.1497 CDS AEJK02000067.1 61167 62084 3 + 918 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229909.peg.1498 CDS AEJK02000067.1 63029 62280 -2 - 750 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229909.peg.1499 CDS AEJK02000067.1 64252 63017 -1 - 1236 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229909.peg.1500 CDS AEJK02000067.1 64485 65384 3 + 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229909.peg.1501 CDS AEJK02000067.1 65444 66409 2 + 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229909.peg.1502 CDS AEJK02000067.1 66417 67340 3 + 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229909.peg.1503 CDS AEJK02000067.1 67353 68111 3 + 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229909.peg.1504 CDS AEJK02000067.1 68115 68252 3 + 138 hypothetical protein - none -
fig|6666666.229909.peg.1505 CDS AEJK02000067.1 69750 68218 -3 - 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229909.peg.1506 CDS AEJK02000067.1 69938 70711 2 + 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229909.peg.1507 CDS AEJK02000067.1 70723 71526 1 + 804 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229909.peg.1508 CDS AEJK02000067.1 73275 71902 -3 - 1374 sodium-dependent transporter - none -
fig|6666666.229909.peg.1509 CDS AEJK02000067.1 73935 73300 -3 - 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229909.peg.1510 CDS AEJK02000067.1 74867 74082 -2 - 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.1511 CDS AEJK02000067.1 75480 74860 -3 - 621 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.1512 CDS AEJK02000067.1 76566 75487 -3 - 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.1513 CDS AEJK02000067.1 78661 76577 -1 - 2085 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.1514 CDS AEJK02000067.1 79252 78662 -1 - 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.1515 CDS AEJK02000067.1 79833 79252 -3 - 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229909.peg.1516 CDS AEJK02000067.1 80911 80024 -1 - 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229909.peg.1517 CDS AEJK02000067.1 81402 80935 -3 - 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229909.peg.1518 CDS AEJK02000067.1 81427 81549 1 + 123 hypothetical protein - none -
fig|6666666.229909.peg.1519 CDS AEJK02000067.1 81665 82600 2 + 936 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229909.peg.1520 CDS AEJK02000067.1 83496 82756 -3 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229909.peg.1521 CDS AEJK02000067.1 84862 83843 -1 - 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229909.peg.1522 CDS AEJK02000067.1 85324 86229 1 + 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229909.peg.1523 CDS AEJK02000067.1 86249 87310 2 + 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229909.peg.1524 CDS AEJK02000067.1 87427 87879 1 + 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229909.peg.1525 CDS AEJK02000067.1 87879 89003 3 + 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229909.peg.1526 CDS AEJK02000067.1 89012 90040 2 + 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229909.peg.1527 CDS AEJK02000067.1 90049 90645 1 + 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229909.peg.1528 CDS AEJK02000067.1 92109 90712 -3 - 1398 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229909.peg.1529 CDS AEJK02000067.1 93055 92276 -1 - 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229909.peg.1530 CDS AEJK02000067.1 93283 94047 1 + 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229909.peg.1531 CDS AEJK02000067.1 94684 94836 1 + 153 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229909.peg.1532 CDS AEJK02000067.1 94823 95884 2 + 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229909.peg.1533 CDS AEJK02000067.1 97519 96029 -1 - 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229909.peg.1534 CDS AEJK02000067.1 97656 98774 3 + 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229909.peg.1535 CDS AEJK02000067.1 98779 99846 1 + 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229909.peg.1536 CDS AEJK02000067.1 100021 100905 1 + 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229909.peg.1537 CDS AEJK02000067.1 101055 101870 3 + 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229909.peg.1538 CDS AEJK02000067.1 105680 104475 -2 - 1206 hypothetical protein - none -
fig|6666666.229909.peg.1539 CDS AEJK02000067.1 107138 106125 -2 - 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229909.peg.1540 CDS AEJK02000067.1 108250 107138 -1 - 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229909.peg.1541 CDS AEJK02000067.1 109086 108277 -3 - 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229909.peg.1542 CDS AEJK02000067.1 109788 109165 -3 - 624 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229909.peg.1543 CDS AEJK02000067.1 110450 109785 -2 - 666 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229909.peg.1544 CDS AEJK02000067.1 111100 110447 -1 - 654 Substrate-specific component NikM of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229909.peg.1545 CDS AEJK02000067.1 111603 111100 -3 - 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229909.peg.1546 CDS AEJK02000067.1 112305 111610 -3 - 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229909.peg.1547 CDS AEJK02000067.1 113176 112484 -1 - 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229909.peg.1548 CDS AEJK02000067.1 113840 113193 -2 - 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229909.peg.1549 CDS AEJK02000067.1 115594 113873 -1 - 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229909.peg.1550 CDS AEJK02000067.1 116290 115607 -1 - 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229909.peg.1551 CDS AEJK02000067.1 116374 116535 1 + 162 hypothetical protein - none -
fig|6666666.229909.peg.1552 CDS AEJK02000067.1 116654 117556 2 + 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229909.peg.1553 CDS AEJK02000067.1 117613 119121 1 + 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229909.peg.1554 CDS AEJK02000067.1 119770 119594 -1 - 177 hypothetical protein - none -
fig|6666666.229909.peg.1555 CDS AEJK02000067.1 121091 120969 -2 - 123 hypothetical protein - none -
fig|6666666.229909.peg.1556 CDS AEJK02000067.1 123871 124497 1 + 627 hypothetical protein - none -
fig|6666666.229909.peg.1557 CDS AEJK02000067.1 125924 126298 2 + 375 hypothetical protein - none -
fig|6666666.229909.peg.1558 CDS AEJK02000067.1 127761 127901 3 + 141 Mobile element protein - none -
fig|6666666.229909.peg.1559 CDS AEJK02000071.1 302 1204 2 + 903 hypothetical protein - none -
fig|6666666.229909.peg.1560 CDS AEJK02000073.1 80 379 2 + 300 hypothetical protein - none -
fig|6666666.229909.peg.1561 CDS AEJK02000073.1 421 756 1 + 336 hypothetical protein - none -
fig|6666666.229909.peg.1562 CDS AEJK02000074.1 13 885 1 + 873 hypothetical protein - none -
fig|6666666.229909.peg.1563 CDS AEJK02000074.1 1280 927 -2 - 354 Putative translation initiation inhibitor, yjgF family - none -
fig|6666666.229909.peg.1564 CDS AEJK02000074.1 1421 2098 2 + 678 FIG00904286: hypothetical protein - none -
fig|6666666.229909.peg.1565 CDS AEJK02000074.1 2104 2814 1 + 711 hypothetical protein - none -
fig|6666666.229909.peg.1566 CDS AEJK02000074.1 4481 2949 -2 - 1533 Na+/H+ antiporter - none -
fig|6666666.229909.peg.1567 CDS AEJK02000074.1 4922 5320 2 + 399 DNA-binding protein H-NS - none -
fig|6666666.229909.peg.1568 CDS AEJK02000074.1 5357 6226 2 + 870 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229909.peg.1569 CDS AEJK02000074.1 6361 6990 1 + 630 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229909.peg.1570 CDS AEJK02000074.1 7097 9049 2 + 1953 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229909.peg.1571 CDS AEJK02000074.1 9245 9682 2 + 438 Putative transporting ATPase - none -
fig|6666666.229909.peg.1572 CDS AEJK02000074.1 10866 9808 -3 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229909.peg.1573 CDS AEJK02000074.1 12582 10888 -3 - 1695 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229909.peg.1574 CDS AEJK02000074.1 13664 12585 -2 - 1080 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229909.peg.1575 CDS AEJK02000074.1 14270 13686 -2 - 585 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229909.peg.1576 CDS AEJK02000074.1 15237 16094 3 + 858 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229909.peg.1577 CDS AEJK02000075.1 1989 646 -3 - 1344 putative hexose phosphate transport protein - none -
fig|6666666.229909.peg.1578 CDS AEJK02000075.1 2810 2007 -2 - 804 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229909.peg.1579 CDS AEJK02000075.1 3178 3903 1 + 726 5-deoxy-glucuronate isomerase (EC 5.3.1.-) Inositol catabolism
fig|6666666.229909.peg.1580 CDS AEJK02000075.1 4789 4670 -1 - 120 hypothetical protein - none -
fig|6666666.229909.peg.1581 CDS AEJK02000075.1 5520 4834 -3 - 687 FOG: TPR repeat, SEL1 subfamily - none -
fig|6666666.229909.peg.1582 CDS AEJK02000077.1 231 479 3 + 249 Mobile element protein - none -
fig|6666666.229909.peg.1583 CDS AEJK02000080.1 141 842 3 + 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229909.peg.1584 CDS AEJK02000080.1 847 2040 1 + 1194 Bicyclomycin resistance protein - none -
fig|6666666.229909.peg.1585 CDS AEJK02000080.1 2212 2847 1 + 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229909.peg.1586 CDS AEJK02000080.1 2852 3517 2 + 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229909.peg.1587 CDS AEJK02000080.1 3528 4265 3 + 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229909.peg.1588 CDS AEJK02000080.1 4316 4489 2 + 174 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229909.peg.1589 CDS AEJK02000080.1 4486 5004 1 + 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229909.peg.1590 CDS AEJK02000080.1 5004 6962 3 + 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229909.peg.1591 CDS AEJK02000080.1 6991 7536 1 + 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229909.peg.1592 CDS AEJK02000080.1 7635 8087 3 + 453 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229909.peg.1593 CDS AEJK02000080.1 8087 9010 2 + 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229909.peg.1594 CDS AEJK02000080.1 9142 9768 1 + 627 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229909.peg.1595 CDS AEJK02000080.1 9786 10076 3 + 291 hypothetical protein - none -
fig|6666666.229909.peg.1596 CDS AEJK02000080.1 10653 12176 3 + 1524 Cytochrome c552 precursor (EC 1.7.2.2) Nitrate and nitrite ammonification;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229909.peg.1597 CDS AEJK02000080.1 12250 12915 1 + 666 Cytochrome c-type protein NrfB precursor Nitrate and nitrite ammonification
fig|6666666.229909.peg.1598 CDS AEJK02000080.1 12912 13589 3 + 678 NrfC protein Nitrate and nitrite ammonification
fig|6666666.229909.peg.1599 CDS AEJK02000080.1 13586 14551 2 + 966 NrfD protein Nitrate and nitrite ammonification
fig|6666666.229909.peg.1600 CDS AEJK02000080.1 15001 14783 -1 - 219 hypothetical protein - none -
fig|6666666.229909.peg.1601 CDS AEJK02000080.1 15140 17050 2 + 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly Nitrate and nitrite ammonification
fig|6666666.229909.peg.1602 CDS AEJK02000080.1 17043 17573 3 + 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly Nitrate and nitrite ammonification
fig|6666666.229909.peg.1603 CDS AEJK02000080.1 17570 18619 2 + 1050 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly Nitrate and nitrite ammonification
fig|6666666.229909.peg.1604 CDS AEJK02000080.1 18616 19812 1 + 1197 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229909.peg.1605 CDS AEJK02000080.1 20458 19970 -1 - 489 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229909.peg.1606 CDS AEJK02000080.1 20733 21488 3 + 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229909.peg.1607 CDS AEJK02000080.1 22611 21535 -3 - 1077 DNA recombination and repair protein RecF DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229909.peg.1608 CDS AEJK02000080.1 23715 22615 -3 - 1101 DNA polymerase III beta subunit (EC 2.7.7.7) DNA replication cluster 1
fig|6666666.229909.peg.1609 CDS AEJK02000080.1 25087 23726 -1 - 1362 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.229909.peg.1610 CDS AEJK02000080.1 25505 25639 2 + 135 LSU ribosomal protein L34p Ribosome LSU bacterial
fig|6666666.229909.peg.1611 CDS AEJK02000080.1 25685 26020 2 + 336 Ribonuclease P protein component (EC 3.1.26.5) tRNA processing
fig|6666666.229909.peg.1612 CDS AEJK02000080.1 25975 26238 1 + 264 Protein YidD - none -
fig|6666666.229909.peg.1613 CDS AEJK02000080.1 27924 29279 3 + 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE RNA modification and chromosome partitioning cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229909.peg.1614 CDS AEJK02000080.1 30291 29383 -3 - 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases;
tRNA modification Archaea
fig|6666666.229909.peg.1615 CDS AEJK02000080.1 30968 30288 -2 - 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229909.peg.1616 CDS AEJK02000080.1 31997 30975 -2 - 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229909.peg.1617 CDS AEJK02000080.1 33804 32008 -3 - 1797 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229909.peg.1618 CDS AEJK02000080.1 34351 33968 -1 - 384 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229909.peg.1619 CDS AEJK02000080.1 34715 35221 2 + 507 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229909.peg.1620 CDS AEJK02000080.1 36050 36589 2 + 540 FIG00696199: hypothetical protein - none -
fig|6666666.229909.peg.1621 CDS AEJK02000080.1 36589 37509 1 + 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229909.peg.1622 CDS AEJK02000080.1 37571 38536 2 + 966 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229909.peg.1623 CDS AEJK02000080.1 38797 38636 -1 - 162 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229909.peg.1624 CDS AEJK02000080.1 39813 38881 -3 - 933 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229909.peg.1625 CDS AEJK02000080.1 40861 39815 -1 - 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229909.peg.1626 CDS AEJK02000080.1 41216 40863 -2 - 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229909.peg.1627 CDS AEJK02000080.1 41567 41217 -2 - 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229909.peg.1628 CDS AEJK02000080.1 41910 42731 3 + 822 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229909.peg.1629 CDS AEJK02000080.1 42830 45142 2 + 2313 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229909.peg.1630 CDS AEJK02000080.1 45288 46028 3 + 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229909.peg.1631 CDS AEJK02000080.1 46170 47033 3 + 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229909.peg.1632 CDS AEJK02000080.1 48518 47106 -2 - 1413 Putative cell division protein precursor - none -
fig|6666666.229909.peg.1633 CDS AEJK02000080.1 49269 48526 -3 - 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.1634 CDS AEJK02000080.1 49380 50111 3 + 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229909.peg.1635 CDS AEJK02000080.1 50104 50610 1 + 507 Arabinose efflux permease - none -
fig|6666666.229909.peg.1636 CDS AEJK02000080.1 50673 51350 3 + 678 YheO-like PAS domain - none -
fig|6666666.229909.peg.1637 CDS AEJK02000080.1 52630 51416 -1 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229909.peg.1638 CDS AEJK02000080.1 54168 52792 -3 - 1377 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229909.peg.1639 CDS AEJK02000080.1 55020 54499 -3 - 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229909.peg.1640 CDS AEJK02000080.1 55085 56116 2 + 1032 Lysyl-lysine 2,3-aminomutase Translation elongation factor P lysylation
fig|6666666.229909.peg.1641 CDS AEJK02000080.1 56288 57610 2 + 1323 Cell envelope opacity-associated protein A - none -
fig|6666666.229909.peg.1642 CDS AEJK02000080.1 57672 58046 3 + 375 opacity associated protein - none -
fig|6666666.229909.peg.1643 CDS AEJK02000080.1 59042 58137 -2 - 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229909.peg.1644 CDS AEJK02000080.1 59284 59544 1 + 261 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229909.peg.1645 CDS AEJK02000080.1 59547 60440 3 + 894 Tyrosine recombinase XerD - none -
fig|6666666.229909.peg.1646 CDS AEJK02000080.1 60604 61902 1 + 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229909.peg.1647 CDS AEJK02000080.1 62050 61925 -1 - 126 hypothetical protein - none -
fig|6666666.229909.peg.1648 CDS AEJK02000080.1 62967 62080 -3 - 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229909.peg.1649 CDS AEJK02000080.1 64220 62967 -2 - 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229909.peg.1650 CDS AEJK02000080.1 64924 64316 -1 - 609 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229909.peg.1651 CDS AEJK02000080.1 66368 65094 -2 - 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229909.peg.1652 CDS AEJK02000080.1 66864 66424 -3 - 441 hypothetical protein - none -
fig|6666666.229909.peg.1653 CDS AEJK02000080.1 67836 66892 -3 - 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229909.peg.1654 CDS AEJK02000080.1 70296 67849 -3 - 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229909.peg.1655 CDS AEJK02000080.1 70516 70385 -1 - 132 hypothetical protein - none -
fig|6666666.229909.peg.1656 CDS AEJK02000080.1 70607 72043 2 + 1437 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229909.peg.1657 CDS AEJK02000080.1 72036 72731 3 + 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229909.peg.1658 CDS AEJK02000080.1 73620 72784 -3 - 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229909.peg.1659 CDS AEJK02000080.1 75446 73935 -2 - 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229909.peg.1660 CDS AEJK02000080.1 76585 75581 -1 - 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229909.peg.1661 CDS AEJK02000080.1 77591 76698 -2 - 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229909.peg.1662 CDS AEJK02000080.1 77749 78213 1 + 465 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229909.peg.1663 CDS AEJK02000080.1 80628 78277 -3 - 2352 TolA protein Ton and Tol transport systems
fig|6666666.229909.peg.1664 CDS AEJK02000080.1 80902 81015 1 + 114 hypothetical protein - none -
fig|6666666.229909.peg.1665 CDS AEJK02000080.1 82865 81012 -2 - 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229909.peg.1666 CDS AEJK02000080.1 83252 84661 2 + 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229909.peg.1667 CDS AEJK02000080.1 85495 84770 -1 - 726 Integral membrane protein TerC - none -
fig|6666666.229909.peg.1668 CDS AEJK02000080.1 86228 85560 -2 - 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229909.peg.1669 CDS AEJK02000080.1 86764 86225 -1 - 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229909.peg.1670 CDS AEJK02000080.1 88271 86841 -2 - 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229909.peg.1671 CDS AEJK02000080.1 88475 88765 2 + 291 FIG00696346: hypothetical protein - none -
fig|6666666.229909.peg.1672 CDS AEJK02000080.1 90104 88827 -2 - 1278 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229909.peg.1673 CDS AEJK02000080.1 90378 90121 -3 - 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229909.peg.1674 CDS AEJK02000080.1 90647 90378 -2 - 270 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229909.peg.1675 CDS AEJK02000080.1 91382 90741 -2 - 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229909.peg.1676 CDS AEJK02000080.1 91920 91411 -3 - 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229909.peg.1677 CDS AEJK02000080.1 92728 91943 -1 - 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229909.peg.1678 CDS AEJK02000080.1 93519 92722 -3 - 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229909.peg.1679 CDS AEJK02000080.1 93689 93805 2 + 117 hypothetical protein - none -
fig|6666666.229909.peg.1680 CDS AEJK02000080.1 93802 94377 1 + 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229909.peg.1681 CDS AEJK02000080.1 94358 94876 2 + 519 LptA, protein essential for LPS transport across the periplasm KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229909.peg.1682 CDS AEJK02000080.1 94882 95607 1 + 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229909.peg.1683 CDS AEJK02000080.1 95611 96144 1 + 534 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229909.peg.1684 CDS AEJK02000080.1 96172 97026 1 + 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229909.peg.1685 CDS AEJK02000080.1 98366 97032 -2 - 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229909.peg.1686 CDS AEJK02000080.1 99566 98373 -2 - 1194 FIG074102: hypothetical protein - none -
fig|6666666.229909.peg.1687 CDS AEJK02000080.1 99892 99599 -1 - 294 UPF0125 protein yfjF - none -
fig|6666666.229909.peg.1688 CDS AEJK02000080.1 100313 99885 -2 - 429 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229909.peg.1689 CDS AEJK02000080.1 100386 100802 3 + 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229909.peg.1690 CDS AEJK02000080.1 102153 101341 -3 - 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229909.peg.1691 CDS AEJK02000080.1 103300 102281 -1 - 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229909.peg.1692 CDS AEJK02000080.1 104170 103400 -1 - 771 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway - none -
fig|6666666.229909.peg.1693 CDS AEJK02000080.1 105288 104170 -3 - 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229909.peg.1694 CDS AEJK02000080.1 105358 105483 1 + 126 hypothetical protein - none -
fig|6666666.229909.peg.1695 CDS AEJK02000080.1 107039 105666 -2 - 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229909.peg.1696 CDS AEJK02000080.1 107197 108204 1 + 1008 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229909.peg.1697 CDS AEJK02000080.1 109273 108467 -1 - 807 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229909.peg.1698 CDS AEJK02000080.1 109288 109404 1 + 117 hypothetical protein - none -
fig|6666666.229909.peg.1699 CDS AEJK02000080.1 109485 110144 3 + 660 putative membrane protein - none -
fig|6666666.229909.peg.1700 CDS AEJK02000080.1 110274 110846 3 + 573 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.229909.peg.1701 CDS AEJK02000080.1 114204 112084 -3 - 2121 unknown - none -
fig|6666666.229909.peg.1702 CDS AEJK02000080.1 115529 114483 -2 - 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229909.peg.1703 CDS AEJK02000080.1 117602 115545 -2 - 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229909.peg.1704 CDS AEJK02000080.1 118382 117630 -2 - 753 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229909.peg.1705 CDS AEJK02000080.1 119875 118835 -1 - 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229909.peg.1706 CDS AEJK02000080.1 120184 120834 1 + 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229909.peg.1707 CDS AEJK02000080.1 120844 121428 1 + 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229909.peg.1708 CDS AEJK02000080.1 121429 122631 1 + 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229909.peg.1709 CDS AEJK02000080.1 122633 123829 2 + 1197 Sugar efflux transporter SotB - none -
fig|6666666.229909.peg.1710 CDS AEJK02000080.1 124228 123899 -1 - 330 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229909.peg.1711 CDS AEJK02000080.1 125626 126609 1 + 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229909.peg.1712 CDS AEJK02000080.1 126632 126922 2 + 291 hypothetical protein - none -
fig|6666666.229909.peg.1713 CDS AEJK02000080.1 128285 126987 -2 - 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229909.peg.1714 CDS AEJK02000080.1 129338 128373 -2 - 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229909.peg.1715 CDS AEJK02000080.1 130872 129352 -3 - 1521 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229909.peg.1716 CDS AEJK02000080.1 131012 132487 2 + 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229909.peg.1717 CDS AEJK02000080.1 132516 132683 3 + 168 hypothetical protein - none -
fig|6666666.229909.peg.1718 CDS AEJK02000080.1 133054 133248 1 + 195 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229909.peg.1719 CDS AEJK02000080.1 133264 133962 1 + 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229909.peg.1720 CDS AEJK02000080.1 135792 135235 -3 - 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.1721 CDS AEJK02000080.1 136047 137237 3 + 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229909.peg.1722 CDS AEJK02000080.1 137451 138503 3 + 1053 Outer membrane protein P2 precursor (OMP P2) - none -
fig|6666666.229909.peg.1723 CDS AEJK02000080.1 138648 138905 3 + 258 hypothetical protein - none -
fig|6666666.229909.peg.1724 CDS AEJK02000080.1 138905 139252 2 + 348 Programmed cell death toxin ChpB - none -
fig|6666666.229909.peg.1725 CDS AEJK02000080.1 140457 139330 -3 - 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229909.peg.1726 CDS AEJK02000080.1 142791 140890 -3 - 1902 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229909.peg.1727 CDS AEJK02000080.1 143080 144513 1 + 1434 Putative GTP-binding protein YdgA - none -
fig|6666666.229909.peg.1728 CDS AEJK02000080.1 144848 144600 -2 - 249 Mobile element protein - none -
fig|6666666.229909.peg.1729 CDS AEJK02000080.1 145202 145011 -2 - 192 Mobile element protein - none -
fig|6666666.229909.peg.1730 CDS AEJK02000080.1 145638 145417 -3 - 222 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229909.peg.1731 CDS AEJK02000080.1 145897 146109 1 + 213 Copper chaperone Copper homeostasis
fig|6666666.229909.peg.1732 CDS AEJK02000080.1 146196 148355 3 + 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229909.peg.1733 CDS AEJK02000080.1 148428 149273 3 + 846 membrane protein, putative - none -
fig|6666666.229909.peg.1734 CDS AEJK02000080.1 149425 149739 1 + 315 Phage-related protein - none -
fig|6666666.229909.peg.1735 CDS AEJK02000080.1 149732 150055 2 + 324 FIG074102: hypothetical protein - none -
fig|6666666.229909.peg.1736 CDS AEJK02000080.1 151350 150118 -3 - 1233 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229909.peg.1737 CDS AEJK02000080.1 151926 151360 -3 - 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229909.peg.1738 CDS AEJK02000080.1 152081 152221 2 + 141 hypothetical protein - none -
fig|6666666.229909.peg.1739 CDS AEJK02000080.1 153786 152185 -3 - 1602 Dca - none -
fig|6666666.229909.peg.1740 CDS AEJK02000080.1 153890 154021 2 + 132 hypothetical protein - none -
fig|6666666.229909.peg.1741 CDS AEJK02000080.1 154018 156291 1 + 2274 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229909.peg.1742 CDS AEJK02000080.1 156415 156296 -1 - 120 hypothetical protein - none -
fig|6666666.229909.peg.1743 CDS AEJK02000081.1 967 80 -1 - 888 RuBisCO operon transcriptional regulator CO2 uptake, carboxysome
fig|6666666.229909.peg.1744 CDS AEJK02000081.1 1077 2546 3 + 1470 Sodium-dependent transporter - none -
fig|6666666.229909.peg.1745 CDS AEJK02000081.1 2558 3157 2 + 600 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229909.peg.1746 CDS AEJK02000081.1 3343 3507 1 + 165 hypothetical protein - none -
fig|6666666.229909.peg.1747 CDS AEJK02000081.1 3743 3552 -2 - 192 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229909.peg.1748 CDS AEJK02000081.1 3894 4376 3 + 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229909.peg.1749 CDS AEJK02000081.1 4650 4459 -3 - 192 hypothetical protein - none -
fig|6666666.229909.peg.1750 CDS AEJK02000081.1 5252 4665 -2 - 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229909.peg.1751 CDS AEJK02000081.1 5719 5438 -1 - 282 hypothetical protein - none -
fig|6666666.229909.peg.1752 CDS AEJK02000082.1 13 465 1 + 453 hypothetical protein - none -
fig|6666666.229909.peg.1753 CDS AEJK02000083.1 2025 94 -3 - 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229909.peg.1754 CDS AEJK02000083.1 2265 3140 3 + 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229909.peg.1755 CDS AEJK02000083.1 3686 3408 -2 - 279 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229909.peg.1756 CDS AEJK02000083.1 4848 3904 -3 - 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229909.peg.1757 CDS AEJK02000083.1 5246 5004 -2 - 243 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229909.peg.1758 CDS AEJK02000083.1 5636 6610 2 + 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229909.peg.1759 CDS AEJK02000084.1 496 170 -1 - 327 VgrG-3 protein - none -
fig|6666666.229909.peg.1760 CDS AEJK02000084.1 1007 858 -2 - 150 hypothetical protein - none -
fig|6666666.229909.peg.1761 CDS AEJK02000084.1 1139 1011 -2 - 129 hypothetical protein - none -
fig|6666666.229909.peg.1762 CDS AEJK02000086.1 973 176 -1 - 798 hypothetical protein - none -
fig|6666666.229909.peg.1763 CDS AEJK02000087.1 1046 171 -2 - 876 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229909.peg.1764 CDS AEJK02000087.1 1530 1114 -3 - 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229909.peg.1765 CDS AEJK02000087.1 2202 1543 -3 - 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229909.peg.1766 CDS AEJK02000087.1 2241 2831 3 + 591 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229909.peg.1767 CDS AEJK02000087.1 3717 2836 -3 - 882 Transcriptional regulator, AraC family - none -
fig|6666666.229909.peg.1768 CDS AEJK02000087.1 4413 3787 -3 - 627 membrane protein ykgB - none -
fig|6666666.229909.peg.1769 CDS AEJK02000087.1 4782 6788 3 + 2007 oligopeptide transporter - none -
fig|6666666.229909.peg.1770 CDS AEJK02000087.1 6850 7278 1 + 429 hypothetical protein - none -
fig|6666666.229909.peg.1771 CDS AEJK02000087.1 7316 8125 2 + 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229909.peg.1772 CDS AEJK02000087.1 8148 9707 3 + 1560 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229909.peg.1773 CDS AEJK02000087.1 9960 10658 3 + 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229909.peg.1774 CDS AEJK02000087.1 10671 11129 3 + 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229909.peg.1775 CDS AEJK02000087.1 11664 11518 -3 - 147 hypothetical protein - none -
fig|6666666.229909.peg.1776 CDS AEJK02000087.1 11685 13139 3 + 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229909.peg.1777 CDS AEJK02000087.1 13616 13485 -2 - 132 hypothetical protein - none -
fig|6666666.229909.peg.1778 CDS AEJK02000087.1 14433 14987 3 + 555 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229909.peg.1779 CDS AEJK02000087.1 15003 15563 3 + 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229909.peg.1780 CDS AEJK02000087.1 15998 16657 2 + 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229909.peg.1781 CDS AEJK02000087.1 16900 17424 1 + 525 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229909.peg.1782 CDS AEJK02000087.1 17467 18696 1 + 1230 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229909.peg.1783 CDS AEJK02000087.1 19142 18999 -2 - 144 hypothetical protein - none -
fig|6666666.229909.peg.1784 CDS AEJK02000087.1 20062 19913 -1 - 150 hypothetical protein - none -
fig|6666666.229909.peg.1785 CDS AEJK02000087.1 21168 20431 -3 - 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229909.peg.1786 CDS AEJK02000087.1 22144 21170 -1 - 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229909.peg.1787 CDS AEJK02000087.1 22251 23039 3 + 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229909.peg.1788 CDS AEJK02000087.1 23652 23077 -3 - 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229909.peg.1789 CDS AEJK02000087.1 24251 23946 -2 - 306 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229909.peg.1790 CDS AEJK02000087.1 24245 24979 2 + 735 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229909.peg.1791 CDS AEJK02000087.1 25009 26295 1 + 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229909.peg.1792 CDS AEJK02000087.1 26604 26449 -3 - 156 hypothetical protein - none -
fig|6666666.229909.peg.1793 CDS AEJK02000087.1 26790 27038 3 + 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229909.peg.1794 CDS AEJK02000087.1 27064 27591 1 + 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229909.peg.1795 CDS AEJK02000087.1 27657 28406 3 + 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229909.peg.1796 CDS AEJK02000087.1 28432 28782 1 + 351 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.229909.peg.1797 CDS AEJK02000087.1 29380 28892 -1 - 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229909.peg.1798 CDS AEJK02000087.1 30453 29380 -3 - 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229909.peg.1799 CDS AEJK02000087.1 31578 30523 -3 - 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229909.peg.1800 CDS AEJK02000087.1 31828 34233 1 + 2406 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229909.peg.1801 CDS AEJK02000087.1 34230 34967 3 + 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229909.peg.1802 CDS AEJK02000087.1 35300 36742 2 + 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229909.peg.1803 CDS AEJK02000087.1 36974 38056 2 + 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229909.peg.1804 CDS AEJK02000087.1 39230 38112 -2 - 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
YrdC-YciO-Sua5 protein family
fig|6666666.229909.peg.1805 CDS AEJK02000087.1 39458 39261 -2 - 198 hypothetical protein - none -
fig|6666666.229909.peg.1806 CDS AEJK02000087.1 39897 39448 -3 - 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome LSU bacterial
fig|6666666.229909.peg.1807 CDS AEJK02000087.1 40143 39913 -3 - 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229909.peg.1808 CDS AEJK02000087.1 40482 40156 -3 - 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229909.peg.1809 CDS AEJK02000087.1 40846 40469 -1 - 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229909.peg.1810 CDS AEJK02000087.1 41621 40998 -2 - 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229909.peg.1811 CDS AEJK02000087.1 41829 44267 3 + 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.1812 CDS AEJK02000087.1 46152 44308 -3 - 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229909.peg.1813 CDS AEJK02000087.1 47157 46240 -3 - 918 transcriptional regulator MtrA - none -
fig|6666666.229909.peg.1814 CDS AEJK02000087.1 47261 47602 2 + 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229909.peg.1815 CDS AEJK02000087.1 48742 47699 -1 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229909.peg.1816 CDS AEJK02000087.1 48831 49556 3 + 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229909.peg.1817 CDS AEJK02000087.1 50099 49605 -2 - 495 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229909.peg.1818 CDS AEJK02000087.1 51383 50100 -2 - 1284 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) KDO2-Lipid A biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229909.peg.1819 CDS AEJK02000087.1 51482 52243 2 + 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229909.peg.1820 CDS AEJK02000087.1 52597 52301 -1 - 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.1821 CDS AEJK02000087.1 52889 52614 -2 - 276 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229909.peg.1822 CDS AEJK02000087.1 54373 53006 -1 - 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.1823 CDS AEJK02000087.1 54560 55636 2 + 1077 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229909.peg.1824 CDS AEJK02000087.1 55924 55703 -1 - 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229909.peg.1825 CDS AEJK02000087.1 56031 56726 3 + 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229909.peg.1826 CDS AEJK02000087.1 56843 58006 2 + 1164 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229909.peg.1827 CDS AEJK02000087.1 58153 59130 1 + 978 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229909.peg.1828 CDS AEJK02000087.1 59305 59132 -1 - 174 hypothetical protein - none -
fig|6666666.229909.peg.1829 CDS AEJK02000087.1 59339 60481 2 + 1143 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229909.peg.1830 CDS AEJK02000087.1 60474 61397 3 + 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229909.peg.1831 CDS AEJK02000087.1 62253 61435 -3 - 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229909.peg.1832 CDS AEJK02000087.1 62472 63269 3 + 798 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229909.peg.1833 CDS AEJK02000087.1 63266 63406 2 + 141 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229909.peg.1834 CDS AEJK02000087.1 63611 63495 -2 - 117 hypothetical protein - none -
fig|6666666.229909.peg.1835 CDS AEJK02000088.1 249 1853 3 + 1605 hypothetical protein - none -
fig|6666666.229909.peg.1836 CDS AEJK02000088.1 1873 3063 1 + 1191 hypothetical protein - none -
fig|6666666.229909.peg.1837 CDS AEJK02000089.1 807 935 3 + 129 hypothetical protein - none -
fig|6666666.229909.peg.1838 CDS AEJK02000089.1 1905 1189 -3 - 717 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229909.peg.1839 CDS AEJK02000089.1 2182 1907 -1 - 276 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229909.peg.1840 CDS AEJK02000089.1 2601 4103 3 + 1503 Sodium-dependent transporter - none -
fig|6666666.229909.peg.1841 CDS AEJK02000089.1 4629 5273 3 + 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229909.peg.1842 CDS AEJK02000089.1 6364 5360 -1 - 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229909.peg.1843 CDS AEJK02000089.1 7533 6859 -3 - 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229909.peg.1844 CDS AEJK02000089.1 8210 7536 -2 - 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229909.peg.1845 CDS AEJK02000089.1 8362 8640 1 + 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229909.peg.1846 CDS AEJK02000089.1 8640 9335 3 + 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229909.peg.1847 CDS AEJK02000089.1 9332 9811 2 + 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229909.peg.1848 CDS AEJK02000089.1 9808 10818 1 + 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229909.peg.1849 CDS AEJK02000089.1 10851 11591 3 + 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229909.peg.1850 CDS AEJK02000089.1 11619 12194 3 + 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229909.peg.1851 CDS AEJK02000089.1 12209 12400 2 + 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229909.peg.1852 CDS AEJK02000089.1 12417 13586 3 + 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229909.peg.1853 CDS AEJK02000089.1 13904 13737 -2 - 168 hypothetical protein - none -
fig|6666666.229909.peg.1854 CDS AEJK02000089.1 14108 13953 -2 - 156 Mobile element protein - none -
fig|6666666.229909.peg.1855 CDS AEJK02000089.1 15361 14216 -1 - 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229909.peg.1856 CDS AEJK02000089.1 15922 15497 -1 - 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229909.peg.1857 CDS AEJK02000089.1 17241 15934 -3 - 1308 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229909.peg.1858 CDS AEJK02000089.1 17406 17284 -3 - 123 hypothetical protein - none -
fig|6666666.229909.peg.1859 CDS AEJK02000089.1 17461 17679 1 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229909.peg.1860 CDS AEJK02000089.1 19286 17742 -2 - 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229909.peg.1861 CDS AEJK02000089.1 20574 19678 -3 - 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229909.peg.1862 CDS AEJK02000089.1 20654 20782 2 + 129 hypothetical protein - none -
fig|6666666.229909.peg.1863 CDS AEJK02000089.1 21062 21721 2 + 660 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229909.peg.1864 CDS AEJK02000089.1 21761 22048 2 + 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229909.peg.1865 CDS AEJK02000089.1 22045 22920 1 + 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229909.peg.1866 CDS AEJK02000089.1 22935 24437 3 + 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229909.peg.1867 CDS AEJK02000089.1 24631 26043 1 + 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229909.peg.1868 CDS AEJK02000089.1 26030 27463 2 + 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229909.peg.1869 CDS AEJK02000089.1 27742 29241 1 + 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229909.peg.1870 CDS AEJK02000089.1 30537 29506 -3 - 1032 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229909.peg.1871 CDS AEJK02000089.1 31685 30531 -2 - 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229909.peg.1872 CDS AEJK02000089.1 32796 31753 -3 - 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229909.peg.1873 CDS AEJK02000089.1 33038 34051 2 + 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229909.peg.1874 CDS AEJK02000089.1 34266 35258 3 + 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229909.peg.1875 CDS AEJK02000089.1 35334 35813 3 + 480 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229909.peg.1876 CDS AEJK02000089.1 35820 36902 3 + 1083 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229909.peg.1877 CDS AEJK02000089.1 36880 37890 1 + 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229909.peg.1878 CDS AEJK02000089.1 39812 37965 -2 - 1848 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229909.peg.1879 CDS AEJK02000089.1 41173 39953 -1 - 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229909.peg.1880 CDS AEJK02000089.1 41343 43361 3 + 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229909.peg.1881 CDS AEJK02000089.1 43551 46622 3 + 3072 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229909.peg.1882 CDS AEJK02000089.1 47310 46732 -3 - 579 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229909.peg.1883 CDS AEJK02000089.1 47278 47406 1 + 129 hypothetical protein - none -
fig|6666666.229909.peg.1884 CDS AEJK02000089.1 47451 48368 3 + 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229909.peg.1885 CDS AEJK02000089.1 48442 50118 1 + 1677 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229909.peg.1886 CDS AEJK02000089.1 50605 50186 -1 - 420 Outer membrane protein W precursor - none -
fig|6666666.229909.peg.1887 CDS AEJK02000089.1 50834 50625 -2 - 210 hypothetical protein - none -
fig|6666666.229909.peg.1888 CDS AEJK02000089.1 51107 51865 2 + 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229909.peg.1889 CDS AEJK02000089.1 51871 52422 1 + 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229909.peg.1890 CDS AEJK02000089.1 52426 52896 1 + 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229909.peg.1891 CDS AEJK02000089.1 52899 53195 3 + 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229909.peg.1892 CDS AEJK02000089.1 53722 55938 1 + 2217 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229909.peg.1893 CDS AEJK02000089.1 55971 56279 3 + 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229909.peg.1894 CDS AEJK02000089.1 56257 57030 1 + 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229909.peg.1895 CDS AEJK02000089.1 57287 57087 -2 - 201 hypothetical protein - none -
fig|6666666.229909.peg.1896 CDS AEJK02000089.1 57358 57504 1 + 147 hypothetical protein - none -
fig|6666666.229909.peg.1897 CDS AEJK02000089.1 58053 57724 -3 - 330 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.229909.peg.1898 CDS AEJK02000089.1 60163 58226 -1 - 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229909.peg.1899 CDS AEJK02000089.1 60797 60195 -2 - 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229909.peg.1900 CDS AEJK02000089.1 61325 60882 -2 - 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229909.peg.1901 CDS AEJK02000089.1 61396 62466 1 + 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229909.peg.1902 CDS AEJK02000089.1 62535 63428 3 + 894 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229909.peg.1903 CDS AEJK02000089.1 63428 64417 2 + 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229909.peg.1904 CDS AEJK02000089.1 64417 65400 1 + 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229909.peg.1905 CDS AEJK02000089.1 65400 66167 3 + 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229909.peg.1906 CDS AEJK02000089.1 67081 66233 -1 - 849 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229909.peg.1907 CDS AEJK02000089.1 67128 67244 3 + 117 hypothetical protein - none -
fig|6666666.229909.peg.1908 CDS AEJK02000089.1 67260 67448 3 + 189 hypothetical protein - none -
fig|6666666.229909.peg.1909 CDS AEJK02000089.1 67504 69312 1 + 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229909.peg.1910 CDS AEJK02000089.1 69317 70087 2 + 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229909.peg.1911 CDS AEJK02000089.1 70099 70491 1 + 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229909.peg.1912 CDS AEJK02000089.1 70501 70845 1 + 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229909.peg.1913 CDS AEJK02000089.1 73080 70942 -3 - 2139 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229909.peg.1914 CDS AEJK02000089.1 73351 74379 1 + 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229909.peg.1915 CDS AEJK02000089.1 75207 74458 -3 - 750 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229909.peg.1916 CDS AEJK02000089.1 76625 75795 -2 - 831 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229909.peg.1917 CDS AEJK02000089.1 76847 77311 2 + 465 FIG00710847: hypothetical protein - none -
fig|6666666.229909.peg.1918 CDS AEJK02000089.1 77284 78111 1 + 828 FIG00711691: hypothetical protein - none -
fig|6666666.229909.peg.1919 CDS AEJK02000089.1 79446 78622 -3 - 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229909.peg.1920 CDS AEJK02000089.1 80120 79497 -2 - 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229909.peg.1921 CDS AEJK02000089.1 82172 81039 -2 - 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229909.peg.1922 CDS AEJK02000089.1 82653 82309 -3 - 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis
fig|6666666.229909.peg.1923 CDS AEJK02000089.1 84599 82719 -2 - 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229909.peg.1924 CDS AEJK02000089.1 84761 84633 -2 - 129 hypothetical protein - none -
fig|6666666.229909.peg.1925 CDS AEJK02000089.1 85893 84733 -3 - 1161 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229909.peg.1926 CDS AEJK02000089.1 87009 86092 -3 - 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) KDO2-Lipid A biosynthesis
fig|6666666.229909.peg.1927 CDS AEJK02000089.1 88327 87047 -1 - 1281 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229909.peg.1928 CDS AEJK02000089.1 89691 88411 -3 - 1281 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229909.peg.1929 CDS AEJK02000089.1 90483 89716 -3 - 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229909.peg.1930 CDS AEJK02000089.1 91409 90480 -2 - 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229909.peg.1931 CDS AEJK02000089.1 92915 91422 -2 - 1494 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229909.peg.1932 CDS AEJK02000089.1 93987 92923 -3 - 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229909.peg.1933 CDS AEJK02000089.1 95217 94027 -3 - 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229909.peg.1934 CDS AEJK02000089.1 96536 95232 -2 - 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229909.peg.1935 CDS AEJK02000089.1 97648 96563 -1 - 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229909.peg.1936 CDS AEJK02000089.1 98970 97642 -3 - 1329 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229909.peg.1937 CDS AEJK02000089.1 100492 99026 -1 - 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229909.peg.1938 CDS AEJK02000089.1 102333 100510 -3 - 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229909.peg.1939 CDS AEJK02000089.1 102521 102351 -2 - 171 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229909.peg.1940 CDS AEJK02000089.1 103636 102668 -1 - 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229909.peg.1941 CDS AEJK02000089.1 104204 103746 -2 - 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229909.peg.1942 CDS AEJK02000089.1 106066 104468 -1 - 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229909.peg.1943 CDS AEJK02000089.1 107294 106608 -2 - 687 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229909.peg.1944 CDS AEJK02000089.1 107956 107294 -1 - 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229909.peg.1945 CDS AEJK02000089.1 108680 107961 -2 - 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229909.peg.1946 CDS AEJK02000089.1 109342 108701 -1 - 642 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229909.peg.1947 CDS AEJK02000089.1 110067 109483 -3 - 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229909.peg.1948 CDS AEJK02000089.1 113689 110156 -1 - 3534 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229909.peg.1949 CDS AEJK02000089.1 114275 114102 -2 - 174 hypothetical protein - none -
fig|6666666.229909.peg.1950 CDS AEJK02000089.1 116238 114316 -3 - 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Archaea;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229909.peg.1951 CDS AEJK02000089.1 116940 116242 -3 - 699 unknown - none -
fig|6666666.229909.peg.1952 CDS AEJK02000089.1 117566 117102 -2 - 465 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229909.peg.1953 CDS AEJK02000089.1 118167 118054 -3 - 114 hypothetical protein - none -
fig|6666666.229909.peg.1954 CDS AEJK02000089.1 118133 118360 2 + 228 Flp pilus assembly protein, pilin Flp Widespread colonization island
fig|6666666.229909.peg.1955 CDS AEJK02000089.1 118956 119132 3 + 177 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229909.peg.1956 CDS AEJK02000089.1 119183 120007 2 + 825 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229909.peg.1957 CDS AEJK02000089.1 120129 121391 3 + 1263 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229909.peg.1958 CDS AEJK02000089.1 121388 121891 2 + 504 Flp pilus assembly protein RcpB Widespread colonization island
fig|6666666.229909.peg.1959 CDS AEJK02000089.1 121907 123031 2 + 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229909.peg.1960 CDS AEJK02000089.1 123045 124325 3 + 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229909.peg.1961 CDS AEJK02000089.1 124325 125212 2 + 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229909.peg.1962 CDS AEJK02000089.1 125209 126075 1 + 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229909.peg.1963 CDS AEJK02000089.1 126104 126826 2 + 723 Flp pilus assembly protein TadD, contains TPR repeat Widespread colonization island
fig|6666666.229909.peg.1964 CDS AEJK02000089.1 128079 129689 3 + 1611 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229909.peg.1965 CDS AEJK02000089.1 129857 130096 2 + 240 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229909.peg.1966 CDS AEJK02000090.1 71 571 2 + 501 Protein sprT - none -
fig|6666666.229909.peg.1967 CDS AEJK02000090.1 728 1969 2 + 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229909.peg.1968 CDS AEJK02000090.1 2062 3426 1 + 1365 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229909.peg.1969 CDS AEJK02000090.1 4577 3528 -2 - 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229909.peg.1970 CDS AEJK02000090.1 4745 4632 -2 - 114 hypothetical protein - none -
fig|6666666.229909.peg.1971 CDS AEJK02000090.1 4872 6011 3 + 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229909.peg.1972 CDS AEJK02000090.1 6033 6584 3 + 552 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229909.peg.1973 CDS AEJK02000090.1 6727 7782 1 + 1056 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229909.peg.1974 CDS AEJK02000090.1 7794 8897 3 + 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229909.peg.1975 CDS AEJK02000090.1 8919 10196 3 + 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229909.peg.1976 CDS AEJK02000090.1 10207 10821 1 + 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229909.peg.1977 CDS AEJK02000090.1 10874 11326 2 + 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229909.peg.1978 CDS AEJK02000090.1 12036 11332 -3 - 705 Chromosomal replication initiator protein DnaA DNA replication cluster 1
fig|6666666.229909.peg.1979 CDS AEJK02000090.1 12022 12159 1 + 138 hypothetical protein - none -
fig|6666666.229909.peg.1980 CDS AEJK02000090.1 13409 12156 -2 - 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229909.peg.1981 CDS AEJK02000090.1 14159 13533 -2 - 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229909.peg.1982 CDS AEJK02000090.1 16141 14294 -1 - 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229909.peg.1983 CDS AEJK02000090.1 18685 16268 -1 - 2418 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229909.peg.1984 CDS AEJK02000090.1 19122 20876 3 + 1755 Putative sulfate permease - none -
fig|6666666.229909.peg.1985 CDS AEJK02000090.1 21804 20902 -3 - 903 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229909.peg.1986 CDS AEJK02000090.1 22784 21849 -2 - 936 hypothetical protein - none -
fig|6666666.229909.peg.1987 CDS AEJK02000090.1 23993 22872 -2 - 1122 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229909.peg.1988 CDS AEJK02000090.1 24768 24013 -3 - 756 Hexuronate utilization operon transcriptional repressor ExuR D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229909.peg.1989 CDS AEJK02000090.1 27158 24783 -2 - 2376 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229909.peg.1990 CDS AEJK02000090.1 27787 27182 -1 - 606 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229909.peg.1991 CDS AEJK02000090.1 28482 27799 -3 - 684 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229909.peg.1992 CDS AEJK02000090.1 29195 30187 2 + 993 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229909.peg.1993 CDS AEJK02000090.1 30242 31186 2 + 945 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229909.peg.1994 CDS AEJK02000090.1 31198 32043 1 + 846 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229909.peg.1995 CDS AEJK02000090.1 32055 33458 3 + 1404 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229909.peg.1996 CDS AEJK02000090.1 33467 34108 2 + 642 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229909.peg.1997 CDS AEJK02000090.1 35241 34195 -3 - 1047 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229909.peg.1998 CDS AEJK02000090.1 36784 35552 -1 - 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229909.peg.1999 CDS AEJK02000090.1 37460 36804 -2 - 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229909.peg.2000 CDS AEJK02000090.1 38728 37559 -1 - 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229909.peg.2001 CDS AEJK02000090.1 39051 38728 -3 - 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229909.peg.2002 CDS AEJK02000090.1 39770 39090 -2 - 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229909.peg.2003 CDS AEJK02000090.1 40125 39796 -3 - 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229909.peg.2004 CDS AEJK02000090.1 40127 40282 2 + 156 hypothetical protein - none -
fig|6666666.229909.peg.2005 CDS AEJK02000090.1 41663 40719 -2 - 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229909.peg.2006 CDS AEJK02000090.1 42157 41663 -1 - 495 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229909.peg.2007 CDS AEJK02000090.1 45011 42237 -2 - 2775 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229909.peg.2008 CDS AEJK02000090.1 45345 45097 -3 - 249 FIG01055344: hypothetical protein - none -
fig|6666666.229909.peg.2009 CDS AEJK02000090.1 45571 45329 -1 - 243 putative ORF-4 - none -
fig|6666666.229909.peg.2010 CDS AEJK02000090.1 46503 45571 -3 - 933 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229909.peg.2011 CDS AEJK02000090.1 48158 46581 -2 - 1578 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229909.peg.2012 CDS AEJK02000090.1 48426 48689 3 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229909.peg.2013 CDS AEJK02000090.1 49476 48799 -3 - 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229909.peg.2014 CDS AEJK02000090.1 49552 50496 1 + 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229909.peg.2015 CDS AEJK02000090.1 50507 50998 2 + 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229909.peg.2016 CDS AEJK02000090.1 51127 51711 1 + 585 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229909.peg.2017 CDS AEJK02000090.1 51900 52991 3 + 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229909.peg.2018 CDS AEJK02000090.1 53327 53908 2 + 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229909.peg.2019 CDS AEJK02000090.1 53980 54126 1 + 147 hypothetical protein - none -
fig|6666666.229909.peg.2020 CDS AEJK02000090.1 54268 54381 1 + 114 hypothetical protein - none -
fig|6666666.229909.peg.2021 CDS AEJK02000090.1 55293 54346 -3 - 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229909.peg.2022 CDS AEJK02000090.1 56231 55407 -2 - 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229909.peg.2023 CDS AEJK02000090.1 56276 57409 2 + 1134 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229909.peg.2024 CDS AEJK02000090.1 57519 57406 -3 - 114 hypothetical protein - none -
fig|6666666.229909.peg.2025 CDS AEJK02000090.1 57513 59528 3 + 2016 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229909.peg.2026 CDS AEJK02000090.1 60175 59597 -1 - 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229909.peg.2027 CDS AEJK02000090.1 60411 60178 -3 - 234 unknown - none -
fig|6666666.229909.peg.2028 CDS AEJK02000090.1 61504 60476 -1 - 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ;
YrdC-YciO-Sua5 protein family
fig|6666666.229909.peg.2029 CDS AEJK02000090.1 61694 61527 -2 - 168 hypothetical protein - none -
fig|6666666.229909.peg.2030 CDS AEJK02000090.1 61729 61944 1 + 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229909.peg.2031 CDS AEJK02000090.1 62066 63823 2 + 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229909.peg.2032 CDS AEJK02000090.1 63899 65749 2 + 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229909.peg.2033 CDS AEJK02000090.1 66144 66416 3 + 273 Phage integrase - none -
fig|6666666.229909.peg.2034 CDS AEJK02000091.1 1033 362 -1 - 672 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229909.peg.2035 CDS AEJK02000091.1 2955 994 -3 - 1962 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229909.peg.2036 CDS AEJK02000091.1 3365 3234 -2 - 132 hypothetical protein - none -
fig|6666666.229909.peg.2037 CDS AEJK02000091.1 4201 3557 -1 - 645 hypothetical protein - none -
fig|6666666.229909.peg.2038 CDS AEJK02000091.1 5139 4198 -3 - 942 hypothetical protein - none -
fig|6666666.229909.peg.2039 CDS AEJK02000092.1 240 40 -3 - 201 Mobile element protein - none -
fig|6666666.229909.peg.2040 CDS AEJK02000093.1 51 200 3 + 150 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229909.peg.2041 CDS AEJK02000094.1 25 597 1 + 573 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229909.peg.2042 CDS AEJK02000094.1 615 752 3 + 138 hypothetical protein - none -
fig|6666666.229909.peg.2043 CDS AEJK02000095.1 107 271 2 + 165 hypothetical protein - none -
fig|6666666.229909.peg.2044 CDS AEJK02000095.1 1888 470 -1 - 1419 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229909.peg.2045 CDS AEJK02000095.1 3035 1908 -2 - 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229909.peg.2046 CDS AEJK02000095.1 5781 3037 -3 - 2745 ABC-type multidrug transport system, permease component - none -
fig|6666666.229909.peg.2047 CDS AEJK02000095.1 6764 5784 -2 - 981 HlyD family secretion protein - none -
fig|6666666.229909.peg.2048 CDS AEJK02000095.1 6912 7475 3 + 564 Transcriptional regulator, TetR family - none -
fig|6666666.229909.peg.2049 CDS AEJK02000095.1 8716 7526 -1 - 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229909.peg.2050 CDS AEJK02000095.1 9138 11747 3 + 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229909.peg.2051 CDS AEJK02000095.1 11820 12839 3 + 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229909.peg.2052 CDS AEJK02000095.1 12853 13689 1 + 837 COG0613, Predicted metal-dependent phosphoesterases (PHP family) YrdC-YciO-Sua5 protein family;
tRNA modification Bacteria
fig|6666666.229909.peg.2053 CDS AEJK02000095.1 15461 16486 2 + 1026 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229909.peg.2054 CDS AEJK02000095.1 17407 16571 -1 - 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229909.peg.2055 CDS AEJK02000095.1 18466 17534 -1 - 933 Universal stress protein E Universal stress protein family
fig|6666666.229909.peg.2056 CDS AEJK02000095.1 19357 18584 -1 - 774 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229909.peg.2057 CDS AEJK02000095.1 19466 19636 2 + 171 hypothetical protein - none -
fig|6666666.229909.peg.2058 CDS AEJK02000095.1 20195 19698 -2 - 498 Ferritin-like protein 2 - none -
fig|6666666.229909.peg.2059 CDS AEJK02000095.1 20696 20211 -2 - 486 Ferritin-like protein 2 - none -
fig|6666666.229909.peg.2060 CDS AEJK02000095.1 23024 21597 -2 - 1428 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229909.peg.2061 CDS AEJK02000095.1 23908 23036 -1 - 873 Integral membrane protein - none -
fig|6666666.229909.peg.2062 CDS AEJK02000095.1 28475 23985 -2 - 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229909.peg.2063 CDS AEJK02000095.1 29215 28475 -1 - 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229909.peg.2064 CDS AEJK02000095.1 32697 29236 -3 - 3462 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229909.peg.2065 CDS AEJK02000095.1 32849 32712 -2 - 138 hypothetical protein - none -
fig|6666666.229909.peg.2066 CDS AEJK02000095.1 34205 32877 -2 - 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229909.peg.2067 CDS AEJK02000095.1 35264 34383 -2 - 882 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229909.peg.2068 CDS AEJK02000095.1 36020 35412 -2 - 609 lipoprotein HlpB - none -
fig|6666666.229909.peg.2069 CDS AEJK02000095.1 36455 36168 -2 - 288 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.229909.peg.2070 CDS AEJK02000095.1 36669 37274 3 + 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229909.peg.2071 CDS AEJK02000095.1 39858 37393 -3 - 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229909.peg.2072 CDS AEJK02000095.1 41420 39981 -2 - 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229909.peg.2073 CDS AEJK02000095.1 42932 41622 -2 - 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229909.peg.2074 CDS AEJK02000095.1 44968 42959 -1 - 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229909.peg.2075 CDS AEJK02000095.1 47160 44965 -3 - 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229909.peg.2076 CDS AEJK02000095.1 47717 47148 -2 - 570 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229909.peg.2077 CDS AEJK02000095.1 48925 48176 -1 - 750 hypothetical protein - none -
fig|6666666.229909.peg.2078 CDS AEJK02000095.1 49512 49276 -3 - 237 hypothetical protein - none -
fig|6666666.229909.peg.2079 CDS AEJK02000096.1 204 85 -3 - 120 hypothetical protein - none -
fig|6666666.229909.peg.2080 CDS AEJK02000098.1 547 365 -1 - 183 hypothetical protein - none -
fig|6666666.229909.peg.2081 CDS AEJK02000099.1 2230 416 -1 - 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229909.peg.2082 CDS AEJK02000099.1 3033 2257 -3 - 777 Protein HI0205 precursor - none -
fig|6666666.229909.peg.2083 CDS AEJK02000099.1 3290 3171 -2 - 120 hypothetical protein - none -
fig|6666666.229909.peg.2084 CDS AEJK02000099.1 3312 4238 3 + 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229909.peg.2085 CDS AEJK02000099.1 4408 5535 1 + 1128 Fic family protein - none -
fig|6666666.229909.peg.2086 CDS AEJK02000099.1 5555 6598 2 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229909.peg.2087 CDS AEJK02000099.1 6716 8611 2 + 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229909.peg.2088 CDS AEJK02000099.1 9341 8706 -2 - 636 Cytochrome c-type protein NapC Nitrate and nitrite ammonification
fig|6666666.229909.peg.2089 CDS AEJK02000099.1 9804 9355 -3 - 450 Nitrate reductase cytochrome c550-type subunit Nitrate and nitrite ammonification
fig|6666666.229909.peg.2090 CDS AEJK02000099.1 10723 9842 -1 - 882 Polyferredoxin NapH (periplasmic nitrate reductase) Nitrate and nitrite ammonification
fig|6666666.229909.peg.2091 CDS AEJK02000099.1 11583 10723 -3 - 861 Ferredoxin-type protein NapG (periplasmic nitrate reductase) Nitrate and nitrite ammonification
fig|6666666.229909.peg.2092 CDS AEJK02000099.1 14096 11610 -2 - 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) Nitrate and nitrite ammonification
fig|6666666.229909.peg.2093 CDS AEJK02000099.1 14414 14130 -2 - 285 periplasmic diheme c-type cytochrome, NapB Nitrate and nitrite ammonification
fig|6666666.229909.peg.2094 CDS AEJK02000099.1 14644 14480 -1 - 165 hypothetical protein - none -
fig|6666666.229909.peg.2095 CDS AEJK02000099.1 14690 16393 2 + 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) Nitrate and nitrite ammonification
fig|6666666.229909.peg.2096 CDS AEJK02000099.1 16408 17433 1 + 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229909.peg.2097 CDS AEJK02000099.1 17449 17580 1 + 132 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229909.peg.2098 CDS AEJK02000099.1 17638 17763 1 + 126 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229909.peg.2099 CDS AEJK02000099.1 17948 18796 2 + 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229909.peg.2100 CDS AEJK02000099.1 19498 18863 -1 - 636 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229909.peg.2101 CDS AEJK02000099.1 20284 20087 -1 - 198 VgrG-3 protein - none -
fig|6666666.229909.peg.2102 CDS AEJK02000099.1 21442 20969 -1 - 474 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229909.peg.2103 CDS AEJK02000099.1 22441 21464 -1 - 978 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229909.peg.2104 CDS AEJK02000099.1 23810 22491 -2 - 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229909.peg.2105 CDS AEJK02000099.1 24068 25066 2 + 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229909.peg.2106 CDS AEJK02000099.1 25126 26637 1 + 1512 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229909.peg.2107 CDS AEJK02000099.1 26641 27768 1 + 1128 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229909.peg.2108 CDS AEJK02000099.1 27857 29053 2 + 1197 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229909.peg.2109 CDS AEJK02000099.1 29106 30452 3 + 1347 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229909.peg.2110 CDS AEJK02000099.1 30578 30456 -2 - 123 hypothetical protein - none -
fig|6666666.229909.peg.2111 CDS AEJK02000099.1 30567 31742 3 + 1176 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229909.peg.2112 CDS AEJK02000099.1 33206 31788 -2 - 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229909.peg.2113 CDS AEJK02000099.1 34308 33217 -3 - 1092 Glycosyltransferase - none -
fig|6666666.229909.peg.2114 CDS AEJK02000099.1 35482 34310 -1 - 1173 glycosyl transferase, group 1 family protein - none -
fig|6666666.229909.peg.2115 CDS AEJK02000099.1 36605 35571 -2 - 1035 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) Capsular heptose biosynthesis
fig|6666666.229909.peg.2116 CDS AEJK02000099.1 37831 36638 -1 - 1194 hypothetical protein - none -
fig|6666666.229909.peg.2117 CDS AEJK02000099.1 38717 37833 -2 - 885 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization
fig|6666666.229909.peg.2118 CDS AEJK02000099.1 41663 38730 -2 - 2934 Possible glycosyltransferase WbpX (EC 2.4.1.-) - none -
fig|6666666.229909.peg.2119 CDS AEJK02000099.1 42463 41711 -1 - 753 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) - none -
fig|6666666.229909.peg.2120 CDS AEJK02000099.1 43251 42460 -3 - 792 O-antigen export system permease protein RfbD - none -
fig|6666666.229909.peg.2121 CDS AEJK02000099.1 44678 43275 -2 - 1404 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) Mannose Metabolism
fig|6666666.229909.peg.2122 CDS AEJK02000099.1 46297 44873 -1 - 1425 Permeases of the major facilitator superfamily - none -
fig|6666666.229909.peg.2123 CDS AEJK02000099.1 46614 47612 3 + 999 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229909.peg.2124 CDS AEJK02000099.1 47624 48427 2 + 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229909.peg.2125 CDS AEJK02000099.1 48443 49279 2 + 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229909.peg.2126 CDS AEJK02000099.1 50985 49948 -3 - 1038 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229909.peg.2127 CDS AEJK02000099.1 52584 51166 -3 - 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229909.peg.2128 CDS AEJK02000099.1 52814 53296 2 + 483 FxsA protein - none -
fig|6666666.229909.peg.2129 CDS AEJK02000099.1 53383 53673 1 + 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229909.peg.2130 CDS AEJK02000099.1 53793 55427 3 + 1635 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229909.peg.2131 CDS AEJK02000099.1 56373 55516 -3 - 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.229909.peg.2132 CDS AEJK02000099.1 57064 56942 -1 - 123 hypothetical protein - none -
fig|6666666.229909.peg.2133 CDS AEJK02000099.1 59318 59512 2 + 195 hypothetical protein - none -
fig|6666666.229909.peg.2134 CDS AEJK02000100.1 204 491 3 + 288 hypothetical protein - none -
fig|6666666.229909.peg.2135 CDS AEJK02000101.1 378 776 3 + 399 hypothetical protein - none -
fig|6666666.229909.peg.2136 CDS AEJK02000101.1 1454 1002 -2 - 453 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229909.peg.2137 CDS AEJK02000101.1 2655 1804 -3 - 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229909.peg.2138 CDS AEJK02000101.1 3449 2652 -2 - 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229909.peg.2139 CDS AEJK02000101.1 4255 3458 -1 - 798 Protein of unknown function DUF81 - none -
fig|6666666.229909.peg.2140 CDS AEJK02000101.1 4857 4258 -3 - 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229909.peg.2141 CDS AEJK02000101.1 5077 5496 1 + 420 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229909.peg.2142 CDS AEJK02000101.1 5507 7015 2 + 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229909.peg.2143 CDS AEJK02000101.1 7012 7977 1 + 966 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229909.peg.2144 CDS AEJK02000101.1 7999 8871 1 + 873 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229909.peg.2145 CDS AEJK02000101.1 8953 9885 1 + 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229909.peg.2146 CDS AEJK02000101.1 10193 9984 -2 - 210 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.229909.peg.2147 CDS AEJK02000101.1 12084 10639 -3 - 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229909.peg.2148 CDS AEJK02000101.1 12775 13563 1 + 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229909.peg.2149 CDS AEJK02000101.1 13676 15052 2 + 1377 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229909.peg.2150 CDS AEJK02000101.1 15354 16703 3 + 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229909.peg.2151 CDS AEJK02000101.1 17193 18647 3 + 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229909.peg.2152 CDS AEJK02000101.1 18924 20249 3 + 1326 hypothetical protein - none -
fig|6666666.229909.peg.2153 CDS AEJK02000101.1 20242 22476 1 + 2235 hypothetical protein - none -
fig|6666666.229909.peg.2154 CDS AEJK02000101.1 22455 23639 3 + 1185 hypothetical protein - none -
fig|6666666.229909.peg.2155 CDS AEJK02000101.1 27190 23714 -1 - 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229909.peg.2156 CDS AEJK02000101.1 27155 27334 2 + 180 hypothetical protein - none -
fig|6666666.229909.peg.2157 CDS AEJK02000101.1 27389 29176 2 + 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229909.peg.2158 CDS AEJK02000101.1 29193 29309 3 + 117 hypothetical protein - none -
fig|6666666.229909.peg.2159 CDS AEJK02000101.1 32534 34534 2 + 2001 Autotransporter adhesin - none -
fig|6666666.229909.peg.2160 CDS AEJK02000101.1 34795 36921 1 + 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229909.peg.2161 CDS AEJK02000101.1 37102 37221 1 + 120 hypothetical protein - none -
fig|6666666.229909.peg.2162 CDS AEJK02000101.1 37523 37990 2 + 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229909.peg.2163 CDS AEJK02000101.1 38805 38017 -3 - 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229909.peg.2164 CDS AEJK02000101.1 39089 38808 -2 - 282 hypothetical protein - none -
fig|6666666.229909.peg.2165 CDS AEJK02000101.1 39237 39082 -3 - 156 hypothetical protein - none -
fig|6666666.229909.peg.2166 CDS AEJK02000101.1 39843 39331 -3 - 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229909.peg.2167 CDS AEJK02000101.1 39913 41322 1 + 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229909.peg.2168 CDS AEJK02000101.1 41881 41654 -1 - 228 hypothetical protein - none -
fig|6666666.229909.peg.2169 CDS AEJK02000101.1 42952 41945 -1 - 1008 hypothetical protein - none -
fig|6666666.229909.peg.2170 CDS AEJK02000101.1 45313 42962 -1 - 2352 hypothetical protein - none -
fig|6666666.229909.peg.2171 CDS AEJK02000101.1 45924 45811 -3 - 114 hypothetical protein - none -
fig|6666666.229909.rna.1 RNA AEJK02000003.1 12817 12889 1 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229909.rna.2 RNA AEJK02000007.1 189 3231 3 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229909.rna.3 RNA AEJK02000007.1 3479 3594 2 + 116 5S RNA - none -
fig|6666666.229909.rna.4 RNA AEJK02000009.1 14504 14576 2 + 73 tRNA-Lys-TTT - none -
fig|6666666.229909.rna.5 RNA AEJK02000009.1 14607 14679 3 + 73 tRNA-Lys-TTT - none -
fig|6666666.229909.rna.6 RNA AEJK02000009.1 14708 14781 2 + 74 tRNA-Lys-CTT - none -
fig|6666666.229909.rna.7 RNA AEJK02000017.1 24646 24718 1 + 73 tRNA-Thr-TGT - none -
fig|6666666.229909.rna.8 RNA AEJK02000017.1 24752 24833 2 + 82 tRNA-Tyr-GTA - none -
fig|6666666.229909.rna.9 RNA AEJK02000017.1 24877 24948 1 + 72 tRNA-Gly-TCC - none -
fig|6666666.229909.rna.10 RNA AEJK02000017.1 24955 25027 1 + 73 tRNA-Thr-GGT - none -
fig|6666666.229909.rna.11 RNA AEJK02000020.1 68074 68002 -1 - 73 tRNA-Asn-GTT - none -
fig|6666666.229909.rna.12 RNA AEJK02000020.1 68154 68082 -3 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.229909.rna.13 RNA AEJK02000022.1 1026 956 -3 - 71 tRNA-Cys-GCA tRNAs
fig|6666666.229909.rna.14 RNA AEJK02000022.1 1110 1038 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229909.rna.15 RNA AEJK02000022.1 8509 8595 1 + 87 tRNA-Ser-TGA - none -
fig|6666666.229909.rna.16 RNA AEJK02000024.1 99 172 3 + 74 tRNA-Ile-GAT - none -
fig|6666666.229909.rna.17 RNA AEJK02000024.1 225 297 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.229909.rna.18 RNA AEJK02000028.1 44349 44422 3 + 74 tRNA-Arg-CCG tRNAs
fig|6666666.229909.rna.19 RNA AEJK02000028.1 44457 44529 3 + 73 tRNA-His-GTG - none -
fig|6666666.229909.rna.20 RNA AEJK02000028.1 44535 44608 3 + 74 tRNA-Pro-TGG - none -
fig|6666666.229909.rna.21 RNA AEJK02000034.1 1705 1623 -1 - 83 tRNA-Leu-CAA tRNAs
fig|6666666.229909.rna.22 RNA AEJK02000036.1 19694 19621 -2 - 74 tRNA-Val-GAC tRNAs
fig|6666666.229909.rna.23 RNA AEJK02000039.1 155 1694 2 + 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229909.rna.24 RNA AEJK02000041.1 6450 6379 -3 - 72 tRNA-Gln-TTG - none -
fig|6666666.229909.rna.25 RNA AEJK02000041.1 6562 6491 -1 - 72 tRNA-Gln-TTG - none -
fig|6666666.229909.rna.26 RNA AEJK02000041.1 6676 6595 -1 - 82 tRNA-Leu-TAG - none -
fig|6666666.229909.rna.27 RNA AEJK02000041.1 6758 6685 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.229909.rna.28 RNA AEJK02000041.1 22556 22628 2 + 73 tRNA-Asn-GTT - none -
fig|6666666.229909.rna.29 RNA AEJK02000041.1 83543 83616 2 + 74 tRNA-Asp-GTC - none -
fig|6666666.229909.rna.30 RNA AEJK02000041.1 83642 83715 2 + 74 tRNA-Asp-GTC - none -
fig|6666666.229909.rna.31 RNA AEJK02000051.1 65642 65569 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.229909.rna.32 RNA AEJK02000051.1 67668 67596 -3 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.229909.rna.33 RNA AEJK02000051.1 67779 67706 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.229909.rna.34 RNA AEJK02000051.1 67905 67786 -3 - 120 5S RNA - none -
fig|6666666.229909.rna.35 RNA AEJK02000054.1 8924 8851 -2 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.229909.rna.36 RNA AEJK02000054.1 9055 8982 -1 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.229909.rna.37 RNA AEJK02000054.1 9166 9076 -1 - 91 tRNA-Ser-GCT - none -
fig|6666666.229909.rna.38 RNA AEJK02000067.1 36571 36501 -1 - 71 tRNA-Pseudo-AAC - none -
fig|6666666.229909.rna.39 RNA AEJK02000080.1 105527 105600 2 + 74 tRNA-Met-CAT - none -
fig|6666666.229909.rna.40 RNA AEJK02000080.1 134859 134787 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.229909.rna.41 RNA AEJK02000080.1 134997 134914 -3 - 84 tRNA-Leu-TAA - none -
fig|6666666.229909.rna.42 RNA AEJK02000080.1 135074 135002 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229909.rna.43 RNA AEJK02000089.1 29406 29323 -3 - 84 tRNA-Leu-CAG tRNAs
fig|6666666.229909.rna.44 RNA AEJK02000089.1 57708 57626 -3 - 83 tRNA-Leu-GAG tRNAs
fig|6666666.229909.rna.45 RNA AEJK02000090.1 18967 18881 -1 - 87 tRNA-Ser-GGA tRNAs
fig|6666666.229909.rna.46 RNA AEJK02000090.1 65879 65952 2 + 74 tRNA-Met-CAT - none -
fig|6666666.229909.rna.47 RNA AEJK02000099.1 20894 20804 -2 - 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229909.rna.48 RNA AEJK02000099.1 56530 56603 1 + 74 tRNA-Pro-TGG - none -
fig|6666666.229909.rna.49 RNA AEJK02000099.1 56640 56713 3 + 74 tRNA-Arg-TCT - none -
fig|6666666.229909.rna.50 RNA AEJK02000101.1 10560 10488 -3 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.229909.rna.51 RNA AEJK02000101.1 12373 12445 1 + 73 tRNA-Val-TAC - none -
fig|6666666.229909.rna.52 RNA AEJK02000101.1 12487 12559 1 + 73 tRNA-Val-TAC - none -
fig|6666666.229909.rna.53 RNA AEJK02000101.1 12590 12662 2 + 73 tRNA-Val-TAC - none -