fig|6666666.229914.peg.1 CDS AP014520.1 1 1362 1 + 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229914.peg.2 CDS AP014520.1 1373 2473 2 + 1101 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229914.peg.3 CDS AP014520.1 2477 3553 2 + 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229914.peg.4 CDS AP014520.1 4355 3600 -2 - 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229914.peg.5 CDS AP014520.1 4543 5118 1 + 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229914.peg.6 CDS AP014520.1 6472 5276 -1 - 1197 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229914.peg.7 CDS AP014520.1 7488 6469 -3 - 1020 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229914.peg.8 CDS AP014520.1 8044 7514 -1 - 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229914.peg.9 CDS AP014520.1 9947 8037 -2 - 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229914.peg.10 CDS AP014520.1 10086 10304 3 + 219 hypothetical protein - none -
fig|6666666.229914.peg.11 CDS AP014520.1 11500 10535 -1 - 966 NrfD protein - none -
fig|6666666.229914.peg.12 CDS AP014520.1 12120 11497 -3 - 624 NrfC protein - none -
fig|6666666.229914.peg.13 CDS AP014520.1 12836 12171 -2 - 666 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229914.peg.14 CDS AP014520.1 14433 12910 -3 - 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229914.peg.15 CDS AP014520.1 15300 15010 -3 - 291 hypothetical protein - none -
fig|6666666.229914.peg.16 CDS AP014520.1 15944 15318 -2 - 627 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229914.peg.17 CDS AP014520.1 16999 16076 -1 - 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229914.peg.18 CDS AP014520.1 17559 16999 -3 - 561 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229914.peg.19 CDS AP014520.1 18094 17549 -1 - 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229914.peg.20 CDS AP014520.1 20081 18123 -2 - 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229914.peg.21 CDS AP014520.1 20599 20081 -1 - 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229914.peg.22 CDS AP014520.1 20769 20596 -3 - 174 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229914.peg.23 CDS AP014520.1 21218 20820 -2 - 399 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229914.peg.24 CDS AP014520.1 21555 21238 -3 - 318 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229914.peg.25 CDS AP014520.1 22231 21566 -1 - 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229914.peg.26 CDS AP014520.1 22871 22236 -2 - 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229914.peg.27 CDS AP014520.1 24173 23043 -2 - 1131 Bicyclomycin resistance protein - none -
fig|6666666.229914.peg.28 CDS AP014520.1 24941 24240 -2 - 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229914.peg.29 CDS AP014520.1 25157 26359 2 + 1203 hypothetical protein - none -
fig|6666666.229914.peg.30 CDS AP014520.1 26401 26736 1 + 336 hypothetical protein - none -
fig|6666666.229914.peg.31 CDS AP014520.1 26836 28047 1 + 1212 hypothetical protein - none -
fig|6666666.229914.peg.32 CDS AP014520.1 28079 29353 2 + 1275 hypothetical protein - none -
fig|6666666.229914.peg.33 CDS AP014520.1 29366 30391 2 + 1026 hypothetical protein - none -
fig|6666666.229914.peg.34 CDS AP014520.1 30513 30887 3 + 375 hypothetical protein - none -
fig|6666666.229914.peg.35 CDS AP014520.1 31040 31186 2 + 147 Mobile element protein - none -
fig|6666666.229914.peg.36 CDS AP014520.1 31180 31644 1 + 465 Mobile element protein - none -
fig|6666666.229914.peg.37 CDS AP014520.1 32938 31784 -1 - 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229914.peg.38 CDS AP014520.1 33415 33146 -1 - 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229914.peg.39 CDS AP014520.1 34260 33511 -3 - 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229914.peg.40 CDS AP014520.1 36019 34313 -1 - 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229914.peg.41 CDS AP014520.1 37314 36010 -3 - 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229914.peg.42 CDS AP014520.1 37431 38645 3 + 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229914.peg.43 CDS AP014520.1 39496 38765 -1 - 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229914.peg.44 CDS AP014520.1 39692 41236 2 + 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229914.peg.45 CDS AP014520.1 41260 41799 1 + 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229914.peg.46 CDS AP014520.1 41988 41842 -3 - 147 hypothetical protein - none -
fig|6666666.229914.peg.47 CDS AP014520.1 43429 41999 -1 - 1431 Transglycosylase, Slt family - none -
fig|6666666.229914.peg.48 CDS AP014520.1 43803 43450 -3 - 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229914.peg.49 CDS AP014520.1 43900 44496 1 + 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.50 CDS AP014520.1 45029 44586 -2 - 444 FIG00904084: hypothetical protein - none -
fig|6666666.229914.peg.51 CDS AP014520.1 45124 45951 1 + 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229914.peg.52 CDS AP014520.1 46944 46153 -3 - 792 putative lipoprotein - none -
fig|6666666.229914.peg.53 CDS AP014520.1 47996 47352 -2 - 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229914.peg.54 CDS AP014520.1 50404 48140 -1 - 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229914.peg.55 CDS AP014520.1 50552 50397 -2 - 156 hypothetical protein - none -
fig|6666666.229914.peg.56 CDS AP014520.1 50891 51025 2 + 135 hypothetical protein - none -
fig|6666666.229914.peg.57 CDS AP014520.1 51492 51013 -3 - 480 hypothetical protein - none -
fig|6666666.229914.peg.58 CDS AP014520.1 53065 52004 -1 - 1062 hypothetical protein - none -
fig|6666666.229914.peg.59 CDS AP014520.1 53817 53062 -3 - 756 hypothetical protein - none -
fig|6666666.229914.peg.60 CDS AP014520.1 54364 53819 -1 - 546 hypothetical protein - none -
fig|6666666.229914.peg.61 CDS AP014520.1 55095 54388 -3 - 708 hypothetical protein - none -
fig|6666666.229914.peg.62 CDS AP014520.1 56404 55085 -1 - 1320 hypothetical protein - none -
fig|6666666.229914.peg.63 CDS AP014520.1 57066 57566 3 + 501 Protein sprT - none -
fig|6666666.229914.peg.64 CDS AP014520.1 57770 58963 2 + 1194 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229914.peg.65 CDS AP014520.1 59056 60420 1 + 1365 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229914.peg.66 CDS AP014520.1 61571 60522 -2 - 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229914.peg.67 CDS AP014520.1 61739 61626 -2 - 114 hypothetical protein - none -
fig|6666666.229914.peg.68 CDS AP014520.1 61866 63005 3 + 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229914.peg.69 CDS AP014520.1 63077 63577 2 + 501 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229914.peg.70 CDS AP014520.1 63720 64775 3 + 1056 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229914.peg.71 CDS AP014520.1 64787 65890 2 + 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229914.peg.72 CDS AP014520.1 65912 67189 2 + 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229914.peg.73 CDS AP014520.1 67200 67814 3 + 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229914.peg.74 CDS AP014520.1 67867 68319 1 + 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229914.peg.75 CDS AP014520.1 69029 68325 -2 - 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229914.peg.76 CDS AP014520.1 69015 69152 3 + 138 hypothetical protein - none -
fig|6666666.229914.peg.77 CDS AP014520.1 70402 69149 -1 - 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229914.peg.78 CDS AP014520.1 71152 70526 -1 - 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229914.peg.79 CDS AP014520.1 72999 71287 -3 - 1713 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229914.peg.80 CDS AP014520.1 75677 73260 -2 - 2418 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229914.peg.81 CDS AP014520.1 76113 77867 3 + 1755 Putative sulfate permease - none -
fig|6666666.229914.peg.82 CDS AP014520.1 78795 77893 -3 - 903 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229914.peg.83 CDS AP014520.1 79450 79025 -1 - 426 hypothetical protein - none -
fig|6666666.229914.peg.84 CDS AP014520.1 79773 79453 -3 - 321 hypothetical protein - none -
fig|6666666.229914.peg.85 CDS AP014520.1 80983 79799 -1 - 1185 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229914.peg.86 CDS AP014520.1 81758 81003 -2 - 756 Hexuronate utilization operon transcriptional repressor ExuR D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229914.peg.87 CDS AP014520.1 84148 81773 -1 - 2376 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229914.peg.88 CDS AP014520.1 84777 84172 -3 - 606 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229914.peg.89 CDS AP014520.1 85471 84824 -1 - 648 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229914.peg.90 CDS AP014520.1 86177 87175 2 + 999 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229914.peg.91 CDS AP014520.1 87230 88174 2 + 945 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229914.peg.92 CDS AP014520.1 88186 89031 1 + 846 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229914.peg.93 CDS AP014520.1 89041 90156 1 + 1116 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229914.peg.94 CDS AP014520.1 90210 90443 3 + 234 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229914.peg.95 CDS AP014520.1 90452 91093 2 + 642 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229914.peg.96 CDS AP014520.1 92225 91179 -2 - 1047 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229914.peg.97 CDS AP014520.1 92526 92407 -3 - 120 hypothetical protein - none -
fig|6666666.229914.peg.98 CDS AP014520.1 93767 92535 -2 - 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229914.peg.99 CDS AP014520.1 94442 93786 -2 - 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229914.peg.100 CDS AP014520.1 95710 94541 -1 - 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229914.peg.101 CDS AP014520.1 96033 95710 -3 - 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229914.peg.102 CDS AP014520.1 96752 96072 -2 - 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229914.peg.103 CDS AP014520.1 97107 96778 -3 - 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229914.peg.104 CDS AP014520.1 97109 97264 2 + 156 hypothetical protein - none -
fig|6666666.229914.peg.105 CDS AP014520.1 98643 97699 -3 - 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229914.peg.106 CDS AP014520.1 99137 98643 -2 - 495 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229914.peg.107 CDS AP014520.1 102039 99217 -3 - 2823 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229914.peg.108 CDS AP014520.1 102325 102077 -1 - 249 FIG01055344: hypothetical protein - none -
fig|6666666.229914.peg.109 CDS AP014520.1 102434 102309 -2 - 126 hypothetical protein - none -
fig|6666666.229914.peg.110 CDS AP014520.1 103482 102550 -3 - 933 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229914.peg.111 CDS AP014520.1 105137 103560 -2 - 1578 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229914.peg.112 CDS AP014520.1 105405 105668 3 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229914.peg.113 CDS AP014520.1 106455 105778 -3 - 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229914.peg.114 CDS AP014520.1 106531 107475 1 + 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229914.peg.115 CDS AP014520.1 107486 107977 2 + 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229914.peg.116 CDS AP014520.1 108106 108690 1 + 585 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229914.peg.117 CDS AP014520.1 108879 109970 3 + 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229914.peg.118 CDS AP014520.1 110306 110887 2 + 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229914.peg.119 CDS AP014520.1 110959 111105 1 + 147 hypothetical protein - none -
fig|6666666.229914.peg.120 CDS AP014520.1 111247 111360 1 + 114 hypothetical protein - none -
fig|6666666.229914.peg.121 CDS AP014520.1 112272 111325 -3 - 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229914.peg.122 CDS AP014520.1 113210 112386 -2 - 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229914.peg.123 CDS AP014520.1 113351 114388 2 + 1038 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229914.peg.124 CDS AP014520.1 114498 114385 -3 - 114 hypothetical protein - none -
fig|6666666.229914.peg.125 CDS AP014520.1 114492 116507 3 + 2016 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229914.peg.126 CDS AP014520.1 117154 116576 -1 - 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229914.peg.127 CDS AP014520.1 117390 117157 -3 - 234 unknown - none -
fig|6666666.229914.peg.128 CDS AP014520.1 118483 117455 -1 - 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ;
YrdC-YciO-Sua5 protein family
fig|6666666.229914.peg.129 CDS AP014520.1 118673 118506 -2 - 168 hypothetical protein - none -
fig|6666666.229914.peg.130 CDS AP014520.1 118708 118923 1 + 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229914.peg.131 CDS AP014520.1 119045 120778 2 + 1734 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229914.peg.132 CDS AP014520.1 120876 122726 3 + 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229914.peg.133 CDS AP014520.1 123121 123393 1 + 273 Phage integrase - none -
fig|6666666.229914.peg.134 CDS AP014520.1 123660 123794 3 + 135 hypothetical protein - none -
fig|6666666.229914.peg.135 CDS AP014520.1 124051 124326 1 + 276 Mobile element protein - none -
fig|6666666.229914.peg.136 CDS AP014520.1 124409 124549 2 + 141 Mobile element protein - none -
fig|6666666.229914.peg.137 CDS AP014520.1 124688 124837 2 + 150 Mobile element protein - none -
fig|6666666.229914.peg.138 CDS AP014520.1 124988 124845 -2 - 144 Mobile element protein - none -
fig|6666666.229914.peg.139 CDS AP014520.1 125631 125374 -3 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229914.peg.140 CDS AP014520.1 125822 125631 -2 - 192 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.229914.peg.141 CDS AP014520.1 126232 125822 -1 - 411 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.229914.peg.142 CDS AP014520.1 126953 126246 -2 - 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229914.peg.143 CDS AP014520.1 127302 126970 -3 - 333 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.229914.peg.144 CDS AP014520.1 127459 127313 -1 - 147 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229914.peg.145 CDS AP014520.1 128435 127614 -2 - 822 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.229914.peg.146 CDS AP014520.1 128758 128456 -1 - 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.229914.peg.147 CDS AP014520.1 129357 128755 -3 - 603 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.229914.peg.148 CDS AP014520.1 129999 129373 -3 - 627 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.229914.peg.149 CDS AP014520.1 130327 130016 -1 - 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229914.peg.150 CDS AP014520.1 131473 130577 -1 - 897 Transcriptional regulators, LysR family - none -
fig|6666666.229914.peg.151 CDS AP014520.1 131809 132399 1 + 591 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229914.peg.152 CDS AP014520.1 132411 133076 3 + 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229914.peg.153 CDS AP014520.1 133079 134422 2 + 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229914.peg.154 CDS AP014520.1 134440 135621 1 + 1182 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.229914.peg.155 CDS AP014520.1 136185 135718 -3 - 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229914.peg.156 CDS AP014520.1 137805 136276 -3 - 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229914.peg.157 CDS AP014520.1 138854 137922 -2 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229914.peg.158 CDS AP014520.1 139868 138864 -2 - 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229914.peg.159 CDS AP014520.1 140111 141502 2 + 1392 Chloride channel protein - none -
fig|6666666.229914.peg.160 CDS AP014520.1 141505 142488 1 + 984 tRNA dihydrouridine synthase A - none -
fig|6666666.229914.peg.161 CDS AP014520.1 143536 142544 -1 - 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229914.peg.162 CDS AP014520.1 143702 144154 2 + 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229914.peg.163 CDS AP014520.1 144189 144947 3 + 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229914.peg.164 CDS AP014520.1 146143 145082 -1 - 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229914.peg.165 CDS AP014520.1 146217 146567 3 + 351 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229914.peg.166 CDS AP014520.1 146758 146633 -1 - 126 hypothetical protein - none -
fig|6666666.229914.peg.167 CDS AP014520.1 147113 146751 -2 - 363 FIG00696564: hypothetical protein - none -
fig|6666666.229914.peg.168 CDS AP014520.1 147348 147064 -3 - 285 hypothetical protein - none -
fig|6666666.229914.peg.169 CDS AP014520.1 147559 148890 1 + 1332 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229914.peg.170 CDS AP014520.1 149015 149419 2 + 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229914.peg.171 CDS AP014520.1 150432 149836 -3 - 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229914.peg.172 CDS AP014520.1 151246 150527 -1 - 720 probable periplasmic protein NMA1059 - none -
fig|6666666.229914.peg.173 CDS AP014520.1 151731 151297 -3 - 435 Ribonuclease E inhibitor RraB RNA processing and degradation, bacterial
fig|6666666.229914.peg.174 CDS AP014520.1 152221 151826 -1 - 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229914.peg.175 CDS AP014520.1 153707 152331 -2 - 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229914.peg.176 CDS AP014520.1 155086 153731 -1 - 1356 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229914.peg.177 CDS AP014520.1 156045 155086 -3 - 960 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229914.peg.178 CDS AP014520.1 156620 156108 -2 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229914.peg.180 CDS AP014520.1 163309 162536 -1 - 774 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229914.peg.181 CDS AP014520.1 163890 163396 -3 - 495 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229914.peg.182 CDS AP014520.1 163996 163883 -1 - 114 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229914.peg.183 CDS AP014520.1 165963 163960 -3 - 2004 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229914.peg.184 CDS AP014520.1 168088 165965 -1 - 2124 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229914.peg.185 CDS AP014520.1 168400 168134 -1 - 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229914.peg.186 CDS AP014520.1 169168 168458 -1 - 711 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229914.peg.187 CDS AP014520.1 169339 170343 1 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229914.peg.188 CDS AP014520.1 172527 172691 3 + 165 Mobile element protein - none -
fig|6666666.229914.peg.189 CDS AP014520.1 172843 173499 1 + 657 Mobile element protein - none -
fig|6666666.229914.peg.190 CDS AP014520.1 173977 173831 -1 - 147 hypothetical protein - none -
fig|6666666.229914.peg.191 CDS AP014520.1 175387 174620 -1 - 768 Mobile element protein - none -
fig|6666666.229914.peg.192 CDS AP014520.1 176763 176080 -3 - 684 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229914.peg.193 CDS AP014520.1 176934 178259 3 + 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229914.peg.194 CDS AP014520.1 178287 178409 3 + 123 hypothetical protein - none -
fig|6666666.229914.peg.195 CDS AP014520.1 178670 178377 -2 - 294 AagD - none -
fig|6666666.229914.peg.196 CDS AP014520.1 179908 178673 -1 - 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229914.peg.197 CDS AP014520.1 180684 179917 -3 - 768 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229914.peg.198 CDS AP014520.1 181832 180699 -2 - 1134 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229914.peg.199 CDS AP014520.1 184235 181848 -2 - 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229914.peg.200 CDS AP014520.1 184519 184370 -1 - 150 hypothetical protein - none -
fig|6666666.229914.peg.201 CDS AP014520.1 185256 184537 -3 - 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229914.peg.202 CDS AP014520.1 186632 185382 -2 - 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism;
Xanthine Metabolism in Bacteria
fig|6666666.229914.peg.203 CDS AP014520.1 186836 186699 -2 - 138 hypothetical protein - none -
fig|6666666.229914.peg.204 CDS AP014520.1 188097 186922 -3 - 1176 Cof protein - none -
fig|6666666.229914.peg.205 CDS AP014520.1 189043 188207 -1 - 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229914.peg.206 CDS AP014520.1 189854 189057 -2 - 798 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229914.peg.207 CDS AP014520.1 190837 189872 -1 - 966 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229914.peg.208 CDS AP014520.1 191720 191136 -2 - 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229914.peg.209 CDS AP014520.1 192011 193183 2 + 1173 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229914.peg.210 CDS AP014520.1 193222 193872 1 + 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229914.peg.211 CDS AP014520.1 193881 194816 3 + 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229914.peg.212 CDS AP014520.1 195380 195772 2 + 393 hypothetical protein - none -
fig|6666666.229914.peg.213 CDS AP014520.1 195852 196334 3 + 483 hypothetical protein - none -
fig|6666666.229914.peg.214 CDS AP014520.1 196286 196894 2 + 609 hypothetical protein - none -
fig|6666666.229914.peg.215 CDS AP014520.1 196884 197585 3 + 702 hypothetical protein - none -
fig|6666666.229914.peg.216 CDS AP014520.1 197954 198556 2 + 603 hypothetical protein - none -
fig|6666666.229914.peg.217 CDS AP014520.1 198616 199086 1 + 471 hypothetical protein - none -
fig|6666666.229914.peg.218 CDS AP014520.1 199126 199956 1 + 831 hypothetical protein - none -
fig|6666666.229914.peg.219 CDS AP014520.1 200102 200224 2 + 123 hypothetical protein - none -
fig|6666666.229914.peg.220 CDS AP014520.1 200528 201079 2 + 552 hypothetical protein - none -
fig|6666666.229914.peg.221 CDS AP014520.1 201124 201261 1 + 138 hypothetical protein - none -
fig|6666666.229914.peg.222 CDS AP014520.1 201534 201232 -3 - 303 hypothetical protein - none -
fig|6666666.229914.peg.223 CDS AP014520.1 204477 205334 3 + 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.229914.peg.224 CDS AP014520.1 207057 205423 -3 - 1635 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229914.peg.225 CDS AP014520.1 207467 207177 -2 - 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229914.peg.226 CDS AP014520.1 208036 207554 -1 - 483 FxsA protein - none -
fig|6666666.229914.peg.227 CDS AP014520.1 208265 209683 2 + 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229914.peg.228 CDS AP014520.1 209864 210901 2 + 1038 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229914.peg.229 CDS AP014520.1 212405 211569 -2 - 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229914.peg.230 CDS AP014520.1 213224 212421 -2 - 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229914.peg.231 CDS AP014520.1 214234 213236 -1 - 999 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229914.peg.232 CDS AP014520.1 214459 214346 -1 - 114 hypothetical protein - none -
fig|6666666.229914.peg.233 CDS AP014520.1 214519 215976 1 + 1458 Permeases of the major facilitator superfamily - none -
fig|6666666.229914.peg.234 CDS AP014520.1 217174 215936 -1 - 1239 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229914.peg.235 CDS AP014520.1 217163 217285 2 + 123 hypothetical protein - none -
fig|6666666.229914.peg.236 CDS AP014520.1 218701 217289 -1 - 1413 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229914.peg.237 CDS AP014520.1 219518 218688 -2 - 831 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229914.peg.238 CDS AP014520.1 219876 219685 -3 - 192 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229914.peg.239 CDS AP014520.1 220918 219965 -1 - 954 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229914.peg.240 CDS AP014520.1 221093 220896 -2 - 198 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229914.peg.241 CDS AP014520.1 222593 221097 -2 - 1497 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229914.peg.242 CDS AP014520.1 223666 222668 -1 - 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229914.peg.243 CDS AP014520.1 223924 225243 1 + 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229914.peg.244 CDS AP014520.1 225293 226654 2 + 1362 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229914.peg.245 CDS AP014520.1 227338 227619 1 + 282 VgrG-3 protein - none -
fig|6666666.229914.peg.246 CDS AP014520.1 228506 228841 2 + 336 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229914.peg.247 CDS AP014520.1 229756 228908 -1 - 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229914.peg.248 CDS AP014520.1 230255 229941 -2 - 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229914.peg.249 CDS AP014520.1 231296 230271 -2 - 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229914.peg.250 CDS AP014520.1 233014 231311 -1 - 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229914.peg.251 CDS AP014520.1 233060 233224 2 + 165 hypothetical protein - none -
fig|6666666.229914.peg.252 CDS AP014520.1 233290 233574 1 + 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229914.peg.253 CDS AP014520.1 233608 236094 1 + 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229914.peg.254 CDS AP014520.1 236142 236981 3 + 840 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229914.peg.255 CDS AP014520.1 236981 237862 2 + 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229914.peg.256 CDS AP014520.1 237899 238348 2 + 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229914.peg.257 CDS AP014520.1 238362 238997 3 + 636 Cytochrome c-type protein NapC - none -
fig|6666666.229914.peg.258 CDS AP014520.1 240986 239091 -2 - 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229914.peg.259 CDS AP014520.1 242147 241104 -2 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229914.peg.260 CDS AP014520.1 243294 242167 -3 - 1128 Fic family protein - none -
fig|6666666.229914.peg.261 CDS AP014520.1 244390 243464 -1 - 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229914.peg.262 CDS AP014520.1 244412 244531 2 + 120 hypothetical protein - none -
fig|6666666.229914.peg.263 CDS AP014520.1 244669 245445 1 + 777 Protein HI0205 precursor - none -
fig|6666666.229914.peg.264 CDS AP014520.1 245472 247286 3 + 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229914.peg.265 CDS AP014520.1 248847 247672 -3 - 1176 hypothetical protein - none -
fig|6666666.229914.peg.266 CDS AP014520.1 250955 248868 -2 - 2088 hypothetical protein - none -
fig|6666666.229914.peg.267 CDS AP014520.1 251160 250933 -3 - 228 hypothetical protein - none -
fig|6666666.229914.peg.268 CDS AP014520.1 251774 251142 -2 - 633 hypothetical protein - none -
fig|6666666.229914.peg.269 CDS AP014520.1 253179 251785 -3 - 1395 hypothetical protein - none -
fig|6666666.229914.peg.270 CDS AP014520.1 254817 253573 -3 - 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.271 CDS AP014520.1 255576 254848 -3 - 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.272 CDS AP014520.1 256069 255626 -1 - 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.273 CDS AP014520.1 257285 256062 -2 - 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.274 CDS AP014520.1 257773 257294 -1 - 480 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.275 CDS AP014520.1 260176 257903 -1 - 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.276 CDS AP014520.1 260766 260182 -3 - 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.277 CDS AP014520.1 261209 260763 -2 - 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.278 CDS AP014520.1 262132 261206 -1 - 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.279 CDS AP014520.1 262851 262129 -3 - 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.280 CDS AP014520.1 264212 262851 -2 - 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.281 CDS AP014520.1 264754 264209 -1 - 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.282 CDS AP014520.1 266447 264780 -2 - 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.283 CDS AP014520.1 266698 266447 -1 - 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.284 CDS AP014520.1 266964 266701 -3 - 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.285 CDS AP014520.1 267730 266942 -1 - 789 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.286 CDS AP014520.1 268458 267715 -3 - 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229914.peg.287 CDS AP014520.1 268811 268488 -2 - 324 hypothetical protein - none -
fig|6666666.229914.peg.288 CDS AP014520.1 268839 269264 3 + 426 Excinuclease ATPase subunit - none -
fig|6666666.229914.peg.289 CDS AP014520.1 270079 269366 -1 - 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229914.peg.290 CDS AP014520.1 270984 270094 -3 - 891 Tyrosine recombinase XerC - none -
fig|6666666.229914.peg.291 CDS AP014520.1 271818 270994 -3 - 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229914.peg.292 CDS AP014520.1 272076 271897 -3 - 180 hypothetical protein - none -
fig|6666666.229914.peg.293 CDS AP014520.1 273104 272076 -2 - 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229914.peg.294 CDS AP014520.1 273287 273787 2 + 501 hypothetical protein - none -
fig|6666666.229914.peg.295 CDS AP014520.1 273760 273909 1 + 150 hypothetical protein - none -
fig|6666666.229914.peg.296 CDS AP014520.1 276458 273888 -2 - 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229914.peg.297 CDS AP014520.1 276723 277304 3 + 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229914.peg.298 CDS AP014520.1 278490 277378 -3 - 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229914.peg.299 CDS AP014520.1 279486 278674 -3 - 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229914.peg.300 CDS AP014520.1 279632 280318 2 + 687 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.229914.peg.301 CDS AP014520.1 280430 281014 2 + 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229914.peg.302 CDS AP014520.1 281332 281201 -1 - 132 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Riboflavin synthesis cluster
fig|6666666.229914.peg.303 CDS AP014520.1 282926 281511 -2 - 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229914.peg.304 CDS AP014520.1 283040 284674 2 + 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229914.peg.305 CDS AP014520.1 286854 284743 -3 - 2112 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229914.peg.306 CDS AP014520.1 288715 286847 -1 - 1869 ATPase family protein - none -
fig|6666666.229914.peg.307 CDS AP014520.1 288897 288763 -3 - 135 hypothetical protein - none -
fig|6666666.229914.peg.308 CDS AP014520.1 289372 289034 -1 - 339 FIG074102: hypothetical protein - none -
fig|6666666.229914.peg.309 CDS AP014520.1 289802 289494 -2 - 309 FIG074102: hypothetical protein - none -
fig|6666666.229914.peg.310 CDS AP014520.1 290102 289842 -2 - 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229914.peg.311 CDS AP014520.1 291057 290152 -3 - 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229914.peg.312 CDS AP014520.1 291411 291202 -3 - 210 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229914.peg.313 CDS AP014520.1 292039 291425 -1 - 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229914.peg.314 CDS AP014520.1 292912 292073 -1 - 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229914.peg.315 CDS AP014520.1 293252 292914 -2 - 339 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229914.peg.316 CDS AP014520.1 293530 293255 -1 - 276 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229914.peg.317 CDS AP014520.1 295961 293541 -2 - 2421 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229914.peg.318 CDS AP014520.1 298233 296467 -3 - 1767 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229914.peg.319 CDS AP014520.1 299267 298209 -2 - 1059 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229914.peg.320 CDS AP014520.1 299484 300047 3 + 564 Outer membrane protein 18/16 - none -
fig|6666666.229914.peg.321 CDS AP014520.1 300151 300381 1 + 231 FIG00696102: hypothetical protein - none -
fig|6666666.229914.peg.322 CDS AP014520.1 300391 302406 1 + 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229914.peg.323 CDS AP014520.1 302511 302392 -3 - 120 hypothetical protein - none -
fig|6666666.229914.peg.324 CDS AP014520.1 303302 302922 -2 - 381 FIG00782409: hypothetical protein - none -
fig|6666666.229914.peg.325 CDS AP014520.1 303430 304032 1 + 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229914.peg.326 CDS AP014520.1 304032 304637 3 + 606 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229914.peg.327 CDS AP014520.1 304640 305125 2 + 486 Putative membrane protein - none -
fig|6666666.229914.peg.328 CDS AP014520.1 305337 305843 3 + 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229914.peg.329 CDS AP014520.1 306010 306174 1 + 165 hypothetical protein - none -
fig|6666666.229914.peg.330 CDS AP014520.1 306215 306394 2 + 180 hypothetical protein - none -
fig|6666666.229914.peg.331 CDS AP014520.1 306776 307543 2 + 768 hypothetical protein - none -
fig|6666666.229914.peg.332 CDS AP014520.1 307530 307817 3 + 288 hypothetical protein - none -
fig|6666666.229914.peg.333 CDS AP014520.1 307964 309478 2 + 1515 hypothetical protein - none -
fig|6666666.229914.peg.334 CDS AP014520.1 309763 310893 1 + 1131 hypothetical protein - none -
fig|6666666.229914.peg.335 CDS AP014520.1 310898 311032 2 + 135 hypothetical protein - none -
fig|6666666.229914.peg.336 CDS AP014520.1 311077 311385 1 + 309 Mobile element protein - none -
fig|6666666.229914.peg.337 CDS AP014520.1 311462 312601 2 + 1140 Probable phospholipase protein - none -
fig|6666666.229914.peg.338 CDS AP014520.1 312598 313665 1 + 1068 Probable phospholipase protein - none -
fig|6666666.229914.peg.339 CDS AP014520.1 313665 314819 3 + 1155 hypothetical protein - none -
fig|6666666.229914.peg.340 CDS AP014520.1 315130 315261 1 + 132 hypothetical protein - none -
fig|6666666.229914.peg.341 CDS AP014520.1 316097 315612 -2 - 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229914.peg.342 CDS AP014520.1 316601 316137 -2 - 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229914.peg.343 CDS AP014520.1 317388 316603 -3 - 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229914.peg.344 CDS AP014520.1 317539 317718 1 + 180 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229914.peg.345 CDS AP014520.1 317699 318358 2 + 660 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229914.peg.346 CDS AP014520.1 319055 318423 -2 - 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229914.peg.347 CDS AP014520.1 319950 319081 -3 - 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.348 CDS AP014520.1 320173 321462 1 + 1290 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229914.peg.349 CDS AP014520.1 321455 322630 2 + 1176 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229914.peg.350 CDS AP014520.1 322611 323261 3 + 651 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229914.peg.351 CDS AP014520.1 323279 324019 2 + 741 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229914.peg.352 CDS AP014520.1 324019 324660 1 + 642 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229914.peg.353 CDS AP014520.1 324732 325256 3 + 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229914.peg.354 CDS AP014520.1 325273 325443 1 + 171 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.229914.peg.355 CDS AP014520.1 325470 326489 3 + 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.356 CDS AP014520.1 326536 327486 1 + 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229914.peg.357 CDS AP014520.1 327593 328531 2 + 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229914.peg.358 CDS AP014520.1 328556 329284 2 + 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229914.peg.359 CDS AP014520.1 329557 329787 1 + 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.360 CDS AP014520.1 329936 329796 -2 - 141 hypothetical protein - none -
fig|6666666.229914.peg.361 CDS AP014520.1 330016 331251 1 + 1236 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229914.peg.362 CDS AP014520.1 332614 331376 -1 - 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229914.peg.363 CDS AP014520.1 332867 334195 2 + 1329 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229914.peg.364 CDS AP014520.1 334262 334570 2 + 309 Iojap protein - none -
fig|6666666.229914.peg.365 CDS AP014520.1 334630 335097 1 + 468 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229914.peg.366 CDS AP014520.1 335110 337071 1 + 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229914.peg.367 CDS AP014520.1 337058 338179 2 + 1122 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229914.peg.368 CDS AP014520.1 338228 339085 2 + 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229914.peg.369 CDS AP014520.1 339116 340306 2 + 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229914.peg.370 CDS AP014520.1 340379 340678 2 + 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229914.peg.371 CDS AP014520.1 340724 341362 2 + 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229914.peg.372 CDS AP014520.1 341427 341714 3 + 288 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229914.peg.373 CDS AP014520.1 341692 342270 1 + 579 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229914.peg.374 CDS AP014520.1 342697 342479 -1 - 219 hypothetical protein - none -
fig|6666666.229914.peg.375 CDS AP014520.1 342891 343013 3 + 123 hypothetical protein - none -
fig|6666666.229914.peg.376 CDS AP014520.1 343060 344424 1 + 1365 lipoprotein, putative - none -
fig|6666666.229914.peg.377 CDS AP014520.1 344459 344581 2 + 123 hypothetical protein - none -
fig|6666666.229914.peg.378 CDS AP014520.1 344550 345845 3 + 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229914.peg.379 CDS AP014520.1 345971 346750 2 + 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229914.peg.380 CDS AP014520.1 346773 347456 3 + 684 L-Cystine ABC transporter, permease protein TcyB - none -
fig|6666666.229914.peg.381 CDS AP014520.1 347466 348233 3 + 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229914.peg.382 CDS AP014520.1 348528 348238 -3 - 291 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229914.peg.383 CDS AP014520.1 348890 348528 -2 - 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229914.peg.384 CDS AP014520.1 349264 348887 -1 - 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229914.peg.385 CDS AP014520.1 349936 349268 -1 - 669 YheO-like PAS domain - none -
fig|6666666.229914.peg.386 CDS AP014520.1 350741 350016 -2 - 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229914.peg.387 CDS AP014520.1 350836 351051 1 + 216 Protein SlyX - none -
fig|6666666.229914.peg.388 CDS AP014520.1 351840 351112 -3 - 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229914.peg.389 CDS AP014520.1 351999 352898 3 + 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229914.peg.390 CDS AP014520.1 353094 353528 3 + 435 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229914.peg.391 CDS AP014520.1 355273 353639 -1 - 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229914.peg.392 CDS AP014520.1 357038 355290 -2 - 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229914.peg.393 CDS AP014520.1 358529 357207 -2 - 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229914.peg.394 CDS AP014520.1 358789 359295 1 + 507 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229914.peg.395 CDS AP014520.1 359311 359823 1 + 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229914.peg.396 CDS AP014520.1 359900 360913 2 + 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.397 CDS AP014520.1 360916 361713 1 + 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229914.peg.398 CDS AP014520.1 363366 362353 -3 - 1014 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229914.peg.399 CDS AP014520.1 363562 363780 1 + 219 FIG074102: hypothetical protein - none -
fig|6666666.229914.peg.400 CDS AP014520.1 363837 364280 3 + 444 Flavoprotein MioC Flavodoxin
fig|6666666.229914.peg.401 CDS AP014520.1 364709 366598 2 + 1890 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229914.peg.402 CDS AP014520.1 367570 366869 -1 - 702 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229914.peg.403 CDS AP014520.1 367725 367555 -3 - 171 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229914.peg.404 CDS AP014520.1 367877 368239 2 + 363 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229914.peg.405 CDS AP014520.1 368232 368915 3 + 684 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229914.peg.406 CDS AP014520.1 369027 369320 3 + 294 FIG048548: ATP synthase protein I2 - none -
fig|6666666.229914.peg.407 CDS AP014520.1 369428 370216 2 + 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229914.peg.408 CDS AP014520.1 370268 370522 2 + 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) - none -
fig|6666666.229914.peg.409 CDS AP014520.1 370572 371042 3 + 471 ATP synthase F0 sector subunit b - none -
fig|6666666.229914.peg.410 CDS AP014520.1 371056 371604 1 + 549 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229914.peg.411 CDS AP014520.1 371757 373157 3 + 1401 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229914.peg.412 CDS AP014520.1 373173 374042 3 + 870 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229914.peg.413 CDS AP014520.1 374059 375432 1 + 1374 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229914.peg.414 CDS AP014520.1 375474 375902 3 + 429 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.229914.peg.415 CDS AP014520.1 377009 375963 -2 - 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229914.peg.416 CDS AP014520.1 378088 377174 -1 - 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229914.peg.417 CDS AP014520.1 379215 378085 -3 - 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229914.peg.418 CDS AP014520.1 379301 380671 2 + 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229914.peg.419 CDS AP014520.1 381894 380803 -3 - 1092 Putative exported protein precursor - none -
fig|6666666.229914.peg.420 CDS AP014520.1 382781 382032 -2 - 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229914.peg.421 CDS AP014520.1 383480 382809 -2 - 672 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229914.peg.422 CDS AP014520.1 383785 384498 1 + 714 hypothetical protein - none -
fig|6666666.229914.peg.423 CDS AP014520.1 384572 384985 2 + 414 hypothetical protein - none -
fig|6666666.229914.peg.424 CDS AP014520.1 385032 385367 3 + 336 hypothetical protein - none -
fig|6666666.229914.peg.425 CDS AP014520.1 385467 387557 3 + 2091 hypothetical protein - none -
fig|6666666.229914.peg.426 CDS AP014520.1 387598 387756 1 + 159 hypothetical protein - none -
fig|6666666.229914.peg.427 CDS AP014520.1 388186 389991 1 + 1806 VgrG-3 protein - none -
fig|6666666.229914.peg.428 CDS AP014520.1 390154 391566 1 + 1413 hypothetical protein - none -
fig|6666666.229914.peg.429 CDS AP014520.1 392190 392495 3 + 306 hypothetical protein - none -
fig|6666666.229914.peg.430 CDS AP014520.1 392571 393278 3 + 708 hypothetical protein - none -
fig|6666666.229914.peg.431 CDS AP014520.1 393416 394516 2 + 1101 hypothetical protein - none -
fig|6666666.229914.peg.432 CDS AP014520.1 394556 395695 2 + 1140 hypothetical protein - none -
fig|6666666.229914.peg.433 CDS AP014520.1 395948 396097 2 + 150 hypothetical protein - none -
fig|6666666.229914.peg.434 CDS AP014520.1 396459 396785 3 + 327 VgrG-3 protein - none -
fig|6666666.229914.peg.435 CDS AP014520.1 397415 398311 2 + 897 hypothetical protein - none -
fig|6666666.229914.peg.436 CDS AP014520.1 398321 398875 2 + 555 hypothetical protein - none -
fig|6666666.229914.peg.437 CDS AP014520.1 399112 399924 1 + 813 hypothetical protein - none -
fig|6666666.229914.peg.438 CDS AP014520.1 399944 401134 2 + 1191 hypothetical protein - none -
fig|6666666.229914.peg.439 CDS AP014520.1 401510 401989 2 + 480 hypothetical protein - none -
fig|6666666.229914.peg.440 CDS AP014520.1 402155 402409 2 + 255 Mobile element protein - none -
fig|6666666.229914.peg.441 CDS AP014520.1 403223 402507 -2 - 717 COG1720: Uncharacterized conserved protein tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229914.peg.442 CDS AP014520.1 403377 404297 3 + 921 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229914.peg.443 CDS AP014520.1 404348 404848 2 + 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229914.peg.444 CDS AP014520.1 404869 405033 1 + 165 hypothetical protein - none -
fig|6666666.229914.peg.445 CDS AP014520.1 405038 406429 2 + 1392 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229914.peg.446 CDS AP014520.1 407065 406487 -1 - 579 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229914.peg.447 CDS AP014520.1 407137 408498 1 + 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229914.peg.448 CDS AP014520.1 408736 409275 1 + 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229914.peg.449 CDS AP014520.1 410485 409346 -1 - 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229914.peg.450 CDS AP014520.1 411756 410482 -3 - 1275 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229914.peg.451 CDS AP014520.1 412991 411888 -2 - 1104 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229914.peg.452 CDS AP014520.1 413239 413084 -1 - 156 Mobile element protein - none -
fig|6666666.229914.peg.453 CDS AP014520.1 413296 413907 1 + 612 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229914.peg.454 CDS AP014520.1 415776 413989 -3 - 1788 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229914.peg.455 CDS AP014520.1 416805 415903 -3 - 903 Lipoprotein nlpI precursor - none -
fig|6666666.229914.peg.456 CDS AP014520.1 419121 416890 -3 - 2232 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229914.peg.457 CDS AP014520.1 419313 419783 3 + 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229914.peg.458 CDS AP014520.1 419897 419772 -2 - 126 hypothetical protein - none -
fig|6666666.229914.peg.459 CDS AP014520.1 420811 420257 -1 - 555 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229914.peg.460 CDS AP014520.1 420864 421385 3 + 522 Type IV pilin PilA Type IV pilus
fig|6666666.229914.peg.461 CDS AP014520.1 421412 422821 2 + 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229914.peg.462 CDS AP014520.1 422814 424037 3 + 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229914.peg.463 CDS AP014520.1 424037 424723 2 + 687 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229914.peg.464 CDS AP014520.1 424892 425071 2 + 180 hypothetical protein - none -
fig|6666666.229914.peg.465 CDS AP014520.1 425409 426227 3 + 819 hypothetical protein - none -
fig|6666666.229914.peg.466 CDS AP014520.1 426379 428340 1 + 1962 hypothetical protein - none -
fig|6666666.229914.peg.467 CDS AP014520.1 428372 429382 2 + 1011 hypothetical protein - none -
fig|6666666.229914.peg.468 CDS AP014520.1 429391 429567 1 + 177 hypothetical protein - none -
fig|6666666.229914.peg.469 CDS AP014520.1 429837 429968 3 + 132 hypothetical protein - none -
fig|6666666.229914.peg.470 CDS AP014520.1 430115 430375 2 + 261 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229914.peg.471 CDS AP014520.1 430342 431004 1 + 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229914.peg.472 CDS AP014520.1 431042 431806 2 + 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229914.peg.473 CDS AP014520.1 431827 432792 1 + 966 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229914.peg.474 CDS AP014520.1 433136 432852 -2 - 285 Mobile element protein - none -
fig|6666666.229914.peg.475 CDS AP014520.1 433589 433834 2 + 246 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.229914.peg.476 CDS AP014520.1 433845 434156 3 + 312 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.229914.peg.477 CDS AP014520.1 434285 434713 2 + 429 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.229914.peg.478 CDS AP014520.1 434726 435031 2 + 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229914.peg.479 CDS AP014520.1 435068 435460 2 + 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229914.peg.480 CDS AP014520.1 435476 436009 2 + 534 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.229914.peg.481 CDS AP014520.1 436098 436376 3 + 279 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.229914.peg.482 CDS AP014520.1 436392 436892 3 + 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229914.peg.483 CDS AP014520.1 437082 437516 3 + 435 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.229914.peg.484 CDS AP014520.1 437520 438845 3 + 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229914.peg.485 CDS AP014520.1 438872 438985 2 + 114 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.229914.peg.486 CDS AP014520.1 439123 439479 1 + 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229914.peg.487 CDS AP014520.1 439495 439884 1 + 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229914.peg.488 CDS AP014520.1 439914 440534 3 + 621 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229914.peg.489 CDS AP014520.1 440563 441552 1 + 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229914.peg.490 CDS AP014520.1 441594 441983 3 + 390 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.229914.peg.491 CDS AP014520.1 443498 442278 -2 - 1221 Tyrosine-specific transport protein - none -
fig|6666666.229914.peg.492 CDS AP014520.1 443621 443508 -2 - 114 hypothetical protein - none -
fig|6666666.229914.peg.493 CDS AP014520.1 444311 443628 -2 - 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229914.peg.494 CDS AP014520.1 445559 444327 -2 - 1233 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229914.peg.495 CDS AP014520.1 445896 445648 -3 - 249 FIG01200701: hypothetical protein - none -
fig|6666666.229914.peg.496 CDS AP014520.1 446101 445925 -1 - 177 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229914.peg.497 CDS AP014520.1 446127 446255 3 + 129 hypothetical protein - none -
fig|6666666.229914.peg.498 CDS AP014520.1 446252 446407 2 + 156 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229914.peg.499 CDS AP014520.1 446401 446520 1 + 120 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229914.peg.500 CDS AP014520.1 446551 446766 1 + 216 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229914.peg.501 CDS AP014520.1 446785 448248 1 + 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229914.peg.502 CDS AP014520.1 448248 448760 3 + 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis;
Transport system clustering with HemG
fig|6666666.229914.peg.504 CDS AP014520.1 455581 455856 1 + 276 Mobile element protein - none -
fig|6666666.229914.peg.505 CDS AP014520.1 455939 456079 2 + 141 Mobile element protein - none -
fig|6666666.229914.peg.506 CDS AP014520.1 456116 456364 2 + 249 Mobile element protein - none -
fig|6666666.229914.peg.507 CDS AP014520.1 457972 456668 -1 - 1305 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229914.peg.508 CDS AP014520.1 459706 458375 -1 - 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229914.peg.509 CDS AP014520.1 459693 459821 3 + 129 hypothetical protein - none -
fig|6666666.229914.peg.510 CDS AP014520.1 459805 460503 1 + 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229914.peg.511 CDS AP014520.1 461267 460578 -2 - 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229914.peg.512 CDS AP014520.1 461648 462307 2 + 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229914.peg.513 CDS AP014520.1 462329 462445 2 + 117 hypothetical protein - none -
fig|6666666.229914.peg.514 CDS AP014520.1 463257 462442 -3 - 816 VgrG-3 protein - none -
fig|6666666.229914.peg.515 CDS AP014520.1 463887 464447 3 + 561 Protein of unknown function DUF414 - none -
fig|6666666.229914.peg.516 CDS AP014520.1 464460 464894 3 + 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229914.peg.517 CDS AP014520.1 464913 466280 3 + 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229914.peg.518 CDS AP014520.1 466796 466554 -2 - 243 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229914.peg.519 CDS AP014520.1 466969 467736 1 + 768 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229914.peg.520 CDS AP014520.1 467848 468705 1 + 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229914.peg.521 CDS AP014520.1 468745 469143 1 + 399 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229914.peg.522 CDS AP014520.1 469146 469475 3 + 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229914.peg.523 CDS AP014520.1 469456 470457 1 + 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229914.peg.524 CDS AP014520.1 470556 471032 3 + 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229914.peg.525 CDS AP014520.1 471139 470987 -1 - 153 hypothetical protein - none -
fig|6666666.229914.peg.526 CDS AP014520.1 471209 471622 2 + 414 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229914.peg.527 CDS AP014520.1 471666 473012 3 + 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229914.peg.528 CDS AP014520.1 473121 473255 3 + 135 hypothetical protein - none -
fig|6666666.229914.peg.529 CDS AP014520.1 473310 474071 3 + 762 Periplasmic protein TonB, links inner and outer membranes - none -
fig|6666666.229914.peg.530 CDS AP014520.1 474188 475576 2 + 1389 FOG: TPR repeat - none -
fig|6666666.229914.peg.531 CDS AP014520.1 475600 475872 1 + 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229914.peg.532 CDS AP014520.1 475869 477305 3 + 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229914.peg.533 CDS AP014520.1 477324 477866 3 + 543 Protein involved in cell division - none -
fig|6666666.229914.peg.534 CDS AP014520.1 477879 478763 3 + 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229914.peg.535 CDS AP014520.1 479007 480056 3 + 1050 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229914.peg.536 CDS AP014520.1 480050 480328 2 + 279 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229914.peg.537 CDS AP014520.1 481210 480962 -1 - 249 unknown - none -
fig|6666666.229914.peg.538 CDS AP014520.1 481988 481665 -2 - 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229914.peg.539 CDS AP014520.1 483590 482217 -2 - 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229914.peg.540 CDS AP014520.1 484259 483987 -2 - 273 FIG00904058: hypothetical protein - none -
fig|6666666.229914.peg.541 CDS AP014520.1 484471 484259 -1 - 213 FIG003276: zinc-binding protein - none -
fig|6666666.229914.peg.542 CDS AP014520.1 485084 484461 -2 - 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229914.peg.543 CDS AP014520.1 485847 485470 -3 - 378 Mobile element protein - none -
fig|6666666.229914.peg.544 CDS AP014520.1 486688 486440 -1 - 249 Mobile element protein - none -
fig|6666666.229914.peg.545 CDS AP014520.1 486865 486725 -1 - 141 Mobile element protein - none -
fig|6666666.229914.peg.546 CDS AP014520.1 487223 486948 -2 - 276 Mobile element protein - none -
fig|6666666.229914.peg.547 CDS AP014520.1 489207 487642 -3 - 1566 hypothetical protein - none -
fig|6666666.229914.peg.548 CDS AP014520.1 489225 489353 3 + 129 hypothetical protein - none -
fig|6666666.229914.peg.549 CDS AP014520.1 491631 489358 -3 - 2274 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229914.peg.550 CDS AP014520.1 491759 491628 -2 - 132 hypothetical protein - none -
fig|6666666.229914.peg.551 CDS AP014520.1 491863 493464 1 + 1602 Dca - none -
fig|6666666.229914.peg.552 CDS AP014520.1 493574 493428 -2 - 147 hypothetical protein - none -
fig|6666666.229914.peg.553 CDS AP014520.1 493723 494289 1 + 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229914.peg.554 CDS AP014520.1 494299 495531 1 + 1233 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229914.peg.555 CDS AP014520.1 495917 495594 -2 - 324 FIG074102: hypothetical protein - none -
fig|6666666.229914.peg.556 CDS AP014520.1 496110 495910 -3 - 201 Phage-related protein - none -
fig|6666666.229914.peg.557 CDS AP014520.1 497221 496376 -1 - 846 membrane protein, putative - none -
fig|6666666.229914.peg.558 CDS AP014520.1 499453 497294 -1 - 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229914.peg.559 CDS AP014520.1 499752 499540 -3 - 213 Copper chaperone Copper homeostasis
fig|6666666.229914.peg.560 CDS AP014520.1 500011 500232 1 + 222 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229914.peg.561 CDS AP014520.1 500447 500638 2 + 192 Mobile element protein - none -
fig|6666666.229914.peg.562 CDS AP014520.1 500801 501049 2 + 249 Mobile element protein - none -
fig|6666666.229914.peg.563 CDS AP014520.1 501496 501717 1 + 222 probable transcription regulator - none -
fig|6666666.229914.peg.564 CDS AP014520.1 506234 501966 -2 - 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229914.peg.565 CDS AP014520.1 510365 506337 -2 - 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229914.peg.566 CDS AP014520.1 511007 510636 -2 - 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229914.peg.567 CDS AP014520.1 511550 511059 -2 - 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229914.peg.568 CDS AP014520.1 511891 511721 -1 - 171 hypothetical protein - none -
fig|6666666.229914.peg.569 CDS AP014520.1 512595 511906 -3 - 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229914.peg.570 CDS AP014520.1 513028 512600 -1 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229914.peg.571 CDS AP014520.1 513735 513184 -3 - 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229914.peg.572 CDS AP014520.1 514147 513737 -1 - 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229914.peg.573 CDS AP014520.1 515289 514585 -3 - 705 hypothetical protein - none -
fig|6666666.229914.peg.574 CDS AP014520.1 515603 515349 -2 - 255 Mobile element protein - none -
fig|6666666.229914.peg.575 CDS AP014520.1 516212 515946 -2 - 267 hypothetical protein - none -
fig|6666666.229914.peg.576 CDS AP014520.1 516480 516304 -3 - 177 hypothetical protein - none -
fig|6666666.229914.peg.577 CDS AP014520.1 517499 516489 -2 - 1011 hypothetical protein - none -
fig|6666666.229914.peg.578 CDS AP014520.1 518833 517502 -1 - 1332 hypothetical protein - none -
fig|6666666.229914.peg.579 CDS AP014520.1 519491 518784 -2 - 708 hypothetical protein - none -
fig|6666666.229914.peg.580 CDS AP014520.1 519777 519643 -3 - 135 hypothetical protein - none -
fig|6666666.229914.peg.581 CDS AP014520.1 520461 519814 -3 - 648 hypothetical protein - none -
fig|6666666.229914.peg.582 CDS AP014520.1 520979 520800 -2 - 180 hypothetical protein - none -
fig|6666666.229914.peg.583 CDS AP014520.1 522050 521175 -2 - 876 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229914.peg.584 CDS AP014520.1 522534 522118 -3 - 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229914.peg.585 CDS AP014520.1 523206 522547 -3 - 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229914.peg.586 CDS AP014520.1 523245 523835 3 + 591 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229914.peg.587 CDS AP014520.1 524721 523840 -3 - 882 Transcriptional regulator, AraC family - none -
fig|6666666.229914.peg.588 CDS AP014520.1 525417 524791 -3 - 627 membrane protein ykgB - none -
fig|6666666.229914.peg.589 CDS AP014520.1 525786 527792 3 + 2007 oligopeptide transporter - none -
fig|6666666.229914.peg.590 CDS AP014520.1 527854 528282 1 + 429 hypothetical protein - none -
fig|6666666.229914.peg.591 CDS AP014520.1 528422 529129 2 + 708 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229914.peg.592 CDS AP014520.1 529152 530711 3 + 1560 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229914.peg.593 CDS AP014520.1 530964 531662 3 + 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229914.peg.594 CDS AP014520.1 531675 532133 3 + 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229914.peg.595 CDS AP014520.1 532668 532522 -3 - 147 hypothetical protein - none -
fig|6666666.229914.peg.596 CDS AP014520.1 532689 534143 3 + 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229914.peg.597 CDS AP014520.1 534620 534489 -2 - 132 hypothetical protein - none -
fig|6666666.229914.peg.598 CDS AP014520.1 535049 534930 -2 - 120 hypothetical protein - none -
fig|6666666.229914.peg.599 CDS AP014520.1 535051 535998 1 + 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229914.peg.600 CDS AP014520.1 536014 536574 1 + 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229914.peg.601 CDS AP014520.1 536599 536892 1 + 294 COG1872 - none -
fig|6666666.229914.peg.602 CDS AP014520.1 537009 537668 3 + 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229914.peg.603 CDS AP014520.1 537911 538435 2 + 525 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229914.peg.604 CDS AP014520.1 538478 539707 2 + 1230 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229914.peg.605 CDS AP014520.1 540153 540010 -3 - 144 hypothetical protein - none -
fig|6666666.229914.peg.606 CDS AP014520.1 541073 540924 -2 - 150 hypothetical protein - none -
fig|6666666.229914.peg.607 CDS AP014520.1 542179 541442 -1 - 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229914.peg.608 CDS AP014520.1 543155 542181 -2 - 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229914.peg.609 CDS AP014520.1 543262 544050 1 + 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229914.peg.610 CDS AP014520.1 544662 544087 -3 - 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229914.peg.611 CDS AP014520.1 545261 544956 -2 - 306 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229914.peg.612 CDS AP014520.1 545255 545989 2 + 735 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229914.peg.613 CDS AP014520.1 546019 547305 1 + 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229914.peg.614 CDS AP014520.1 547614 547459 -3 - 156 hypothetical protein - none -
fig|6666666.229914.peg.615 CDS AP014520.1 547800 548048 3 + 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229914.peg.616 CDS AP014520.1 548074 548541 1 + 468 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229914.peg.617 CDS AP014520.1 548666 549415 2 + 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229914.peg.618 CDS AP014520.1 549441 549791 3 + 351 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.229914.peg.619 CDS AP014520.1 550389 549901 -3 - 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229914.peg.620 CDS AP014520.1 551462 550389 -2 - 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229914.peg.621 CDS AP014520.1 552587 551532 -2 - 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229914.peg.622 CDS AP014520.1 552837 555245 3 + 2409 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229914.peg.623 CDS AP014520.1 555238 555975 1 + 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229914.peg.624 CDS AP014520.1 556118 556288 2 + 171 hypothetical protein - none -
fig|6666666.229914.peg.625 CDS AP014520.1 556308 557750 3 + 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229914.peg.626 CDS AP014520.1 557982 559064 3 + 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229914.peg.627 CDS AP014520.1 560238 559120 -3 - 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
YrdC-YciO-Sua5 protein family
fig|6666666.229914.peg.628 CDS AP014520.1 560466 560269 -3 - 198 hypothetical protein - none -
fig|6666666.229914.peg.629 CDS AP014520.1 560905 560456 -1 - 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome LSU bacterial
fig|6666666.229914.peg.630 CDS AP014520.1 561151 560921 -1 - 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229914.peg.631 CDS AP014520.1 561490 561164 -1 - 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229914.peg.632 CDS AP014520.1 561854 561477 -2 - 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229914.peg.633 CDS AP014520.1 562629 562006 -3 - 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229914.peg.634 CDS AP014520.1 562837 565275 1 + 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.635 CDS AP014520.1 567160 565316 -1 - 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229914.peg.636 CDS AP014520.1 568165 567248 -1 - 918 transcriptional regulator MtrA - none -
fig|6666666.229914.peg.637 CDS AP014520.1 568269 568610 3 + 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229914.peg.638 CDS AP014520.1 569750 568707 -2 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229914.peg.639 CDS AP014520.1 569839 570564 1 + 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229914.peg.640 CDS AP014520.1 571107 570613 -3 - 495 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229914.peg.641 CDS AP014520.1 572355 571108 -3 - 1248 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) KDO2-Lipid A biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229914.peg.642 CDS AP014520.1 572489 573250 2 + 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229914.peg.643 CDS AP014520.1 573604 573308 -1 - 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.644 CDS AP014520.1 573896 573621 -2 - 276 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.645 CDS AP014520.1 575380 574013 -1 - 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.646 CDS AP014520.1 575566 576642 1 + 1077 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229914.peg.647 CDS AP014520.1 576930 576709 -3 - 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229914.peg.648 CDS AP014520.1 577037 577732 2 + 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229914.peg.649 CDS AP014520.1 577848 579011 3 + 1164 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229914.peg.650 CDS AP014520.1 579076 580155 1 + 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229914.peg.651 CDS AP014520.1 580330 580157 -1 - 174 hypothetical protein - none -
fig|6666666.229914.peg.652 CDS AP014520.1 580364 581506 2 + 1143 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229914.peg.653 CDS AP014520.1 581499 582422 3 + 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229914.peg.654 CDS AP014520.1 583278 582460 -3 - 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229914.peg.655 CDS AP014520.1 583497 583919 3 + 423 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229914.peg.656 CDS AP014520.1 584168 584431 2 + 264 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229914.peg.657 CDS AP014520.1 584635 584519 -1 - 117 hypothetical protein - none -
fig|6666666.229914.peg.658 CDS AP014520.1 586077 584893 -3 - 1185 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229914.peg.659 CDS AP014520.1 588243 586141 -3 - 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229914.peg.660 CDS AP014520.1 588828 588358 -3 - 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229914.peg.661 CDS AP014520.1 589118 588981 -2 - 138 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229914.peg.662 CDS AP014520.1 589413 589297 -3 - 117 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229914.peg.663 CDS AP014520.1 589885 589577 -1 - 309 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229914.peg.664 CDS AP014520.1 590517 590702 3 + 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229914.peg.665 CDS AP014520.1 590735 591616 2 + 882 Protein rarD - none -
fig|6666666.229914.peg.666 CDS AP014520.1 592411 591611 -1 - 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229914.peg.667 CDS AP014520.1 592966 592415 -1 - 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229914.peg.668 CDS AP014520.1 593510 592971 -2 - 540 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229914.peg.669 CDS AP014520.1 593513 595267 2 + 1755 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229914.peg.670 CDS AP014520.1 595392 595940 3 + 549 FIG00903983: hypothetical protein - none -
fig|6666666.229914.peg.671 CDS AP014520.1 595952 596278 2 + 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229914.peg.672 CDS AP014520.1 596604 596290 -3 - 315 Uncharacterized protein PM1437 - none -
fig|6666666.229914.peg.673 CDS AP014520.1 596647 597522 1 + 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229914.peg.674 CDS AP014520.1 597584 598339 2 + 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229914.peg.675 CDS AP014520.1 598673 601129 2 + 2457 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229914.peg.676 CDS AP014520.1 601151 601423 2 + 273 Probable tonB-dependent receptor HI1217 precursor - none -
fig|6666666.229914.peg.677 CDS AP014520.1 603668 602013 -2 - 1656 ABC transporter ATP-binding protein - none -
fig|6666666.229914.peg.678 CDS AP014520.1 603829 603701 -1 - 129 ABC transporter ATP-binding protein - none -
fig|6666666.229914.peg.679 CDS AP014520.1 603953 605611 2 + 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229914.peg.680 CDS AP014520.1 605623 605736 1 + 114 hypothetical protein - none -
fig|6666666.229914.peg.681 CDS AP014520.1 605768 606481 2 + 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229914.peg.682 CDS AP014520.1 606548 606691 2 + 144 hypothetical protein - none -
fig|6666666.229914.peg.683 CDS AP014520.1 606705 607268 3 + 564 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229914.peg.684 CDS AP014520.1 607290 608573 3 + 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229914.peg.685 CDS AP014520.1 608595 609314 3 + 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229914.peg.686 CDS AP014520.1 609329 610198 2 + 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.687 CDS AP014520.1 610207 611541 1 + 1335 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage CBSS-83331.1.peg.3039;
Periplasmic Stress Response
fig|6666666.229914.peg.688 CDS AP014520.1 611560 613971 1 + 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229914.peg.689 CDS AP014520.1 614076 614651 3 + 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229914.peg.690 CDS AP014520.1 614651 615667 2 + 1017 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229914.peg.691 CDS AP014520.1 615809 616219 2 + 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229914.peg.692 CDS AP014520.1 616240 617028 1 + 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229914.peg.693 CDS AP014520.1 617067 618299 3 + 1233 Lipid-A-disaccharide synthase (EC 2.4.1.182) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229914.peg.694 CDS AP014520.1 618292 618891 1 + 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229914.peg.695 CDS AP014520.1 618931 620799 1 + 1869 Putative transport protein - none -
fig|6666666.229914.peg.696 CDS AP014520.1 620810 621418 2 + 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.697 CDS AP014520.1 621429 622061 3 + 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.698 CDS AP014520.1 622061 622990 2 + 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.699 CDS AP014520.1 623080 623661 1 + 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229914.peg.700 CDS AP014520.1 624170 623943 -2 - 228 hypothetical protein - none -
fig|6666666.229914.peg.701 CDS AP014520.1 625241 624234 -2 - 1008 hypothetical protein - none -
fig|6666666.229914.peg.702 CDS AP014520.1 627157 625730 -1 - 1428 hypothetical protein - none -
fig|6666666.229914.peg.703 CDS AP014520.1 628122 627187 -3 - 936 hypothetical protein - none -
fig|6666666.229914.peg.704 CDS AP014520.1 629018 628122 -2 - 897 hypothetical protein - none -
fig|6666666.229914.peg.705 CDS AP014520.1 629541 629002 -3 - 540 hypothetical protein - none -
fig|6666666.229914.peg.706 CDS AP014520.1 630327 629656 -3 - 672 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229914.peg.707 CDS AP014520.1 632249 630288 -2 - 1962 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229914.peg.708 CDS AP014520.1 632659 632528 -1 - 132 hypothetical protein - none -
fig|6666666.229914.peg.709 CDS AP014520.1 633495 632851 -3 - 645 hypothetical protein - none -
fig|6666666.229914.peg.710 CDS AP014520.1 634862 633492 -2 - 1371 hypothetical protein - none -
fig|6666666.229914.peg.711 CDS AP014520.1 636029 634899 -2 - 1131 hypothetical protein - none -
fig|6666666.229914.peg.712 CDS AP014520.1 637006 636104 -1 - 903 hypothetical protein - none -
fig|6666666.229914.peg.713 CDS AP014520.1 638911 637052 -1 - 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229914.peg.714 CDS AP014520.1 640302 638908 -3 - 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229914.peg.715 CDS AP014520.1 640452 642167 3 + 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229914.peg.716 CDS AP014520.1 642234 642563 3 + 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229914.peg.717 CDS AP014520.1 642603 642857 3 + 255 YgfY COG2938 - none -
fig|6666666.229914.peg.718 CDS AP014520.1 642988 643563 1 + 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229914.peg.719 CDS AP014520.1 643607 644191 2 + 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229914.peg.720 CDS AP014520.1 644274 645230 3 + 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229914.peg.721 CDS AP014520.1 645240 645677 3 + 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229914.peg.722 CDS AP014520.1 645758 646309 2 + 552 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229914.peg.723 CDS AP014520.1 646363 647118 1 + 756 Short chain dehydrogenase - none -
fig|6666666.229914.peg.724 CDS AP014520.1 648658 647198 -1 - 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229914.peg.725 CDS AP014520.1 648773 649237 2 + 465 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229914.peg.726 CDS AP014520.1 651668 649326 -2 - 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229914.peg.727 CDS AP014520.1 652294 651734 -1 - 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229914.peg.728 CDS AP014520.1 652495 653100 1 + 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229914.peg.729 CDS AP014520.1 654402 653152 -3 - 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229914.peg.730 CDS AP014520.1 654539 654420 -2 - 120 hypothetical protein - none -
fig|6666666.229914.peg.731 CDS AP014520.1 654662 654976 2 + 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229914.peg.732 CDS AP014520.1 654973 656862 1 + 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229914.peg.733 CDS AP014520.1 656959 659379 1 + 2421 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229914.peg.734 CDS AP014520.1 660346 659432 -1 - 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229914.peg.735 CDS AP014520.1 661077 661343 3 + 267 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229914.peg.736 CDS AP014520.1 661340 662260 2 + 921 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229914.peg.737 CDS AP014520.1 663265 662324 -1 - 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229914.peg.738 CDS AP014520.1 663428 664915 2 + 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229914.peg.739 CDS AP014520.1 664931 665959 2 + 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229914.peg.740 CDS AP014520.1 665965 667422 1 + 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229914.peg.741 CDS AP014520.1 668126 667470 -2 - 657 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229914.peg.742 CDS AP014520.1 669784 668153 -1 - 1632 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229914.peg.743 CDS AP014520.1 670037 670411 2 + 375 hypothetical protein - none -
fig|6666666.229914.peg.744 CDS AP014520.1 670564 670710 1 + 147 Mobile element protein - none -
fig|6666666.229914.peg.745 CDS AP014520.1 670704 671213 3 + 510 Mobile element protein - none -
fig|6666666.229914.peg.746 CDS AP014520.1 672149 671262 -2 - 888 RuBisCO operon transcriptional regulator CO2 uptake, carboxysome
fig|6666666.229914.peg.747 CDS AP014520.1 672259 673728 1 + 1470 Sodium-dependent transporter - none -
fig|6666666.229914.peg.748 CDS AP014520.1 673740 674339 3 + 600 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229914.peg.749 CDS AP014520.1 674925 674734 -3 - 192 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229914.peg.750 CDS AP014520.1 675076 675558 1 + 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229914.peg.751 CDS AP014520.1 675832 675641 -1 - 192 hypothetical protein - none -
fig|6666666.229914.peg.752 CDS AP014520.1 676434 675847 -3 - 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229914.peg.753 CDS AP014520.1 676817 676620 -2 - 198 hypothetical protein - none -
fig|6666666.229914.peg.754 CDS AP014520.1 677160 677897 3 + 738 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229914.peg.755 CDS AP014520.1 679216 677966 -1 - 1251 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229914.peg.756 CDS AP014520.1 680614 679229 -1 - 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229914.peg.757 CDS AP014520.1 681391 680645 -1 - 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229914.peg.758 CDS AP014520.1 682331 681405 -2 - 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229914.peg.759 CDS AP014520.1 682487 684988 2 + 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229914.peg.760 CDS AP014520.1 684998 685627 2 + 630 Nitrate/nitrite response regulator protein - none -
fig|6666666.229914.peg.761 CDS AP014520.1 685695 685931 3 + 237 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229914.peg.762 CDS AP014520.1 685936 687552 1 + 1617 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229914.peg.763 CDS AP014520.1 687704 691462 2 + 3759 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229914.peg.764 CDS AP014520.1 691465 693012 1 + 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229914.peg.765 CDS AP014520.1 694693 693077 -1 - 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.229914.peg.766 CDS AP014520.1 694951 695595 1 + 645 converved hypothetical protein - none -
fig|6666666.229914.peg.767 CDS AP014520.1 695644 696363 1 + 720 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229914.peg.768 CDS AP014520.1 696532 697596 1 + 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229914.peg.769 CDS AP014520.1 697614 698204 3 + 591 FIG01200173: hypothetical protein - none -
fig|6666666.229914.peg.770 CDS AP014520.1 698371 698643 1 + 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229914.peg.771 CDS AP014520.1 698769 699566 3 + 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229914.peg.772 CDS AP014520.1 699620 701452 2 + 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229914.peg.773 CDS AP014520.1 702668 701604 -2 - 1065 FIG01220323: hypothetical protein - none -
fig|6666666.229914.peg.774 CDS AP014520.1 702768 703658 3 + 891 Transcriptional regulator, LysR family - none -
fig|6666666.229914.peg.775 CDS AP014520.1 704906 703797 -2 - 1110 Putative exported protein precursor - none -
fig|6666666.229914.peg.776 CDS AP014520.1 706698 705043 -3 - 1656 Carboxylesterase type B - none -
fig|6666666.229914.peg.777 CDS AP014520.1 707904 706924 -3 - 981 Aldo-keto reductase - none -
fig|6666666.229914.peg.778 CDS AP014520.1 708813 707968 -3 - 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229914.peg.779 CDS AP014520.1 708996 709889 3 + 894 Transcriptional regulator, LysR family - none -
fig|6666666.229914.peg.780 CDS AP014520.1 710793 709978 -3 - 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229914.peg.781 CDS AP014520.1 712630 711131 -1 - 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229914.peg.782 CDS AP014520.1 712756 713424 1 + 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229914.peg.783 CDS AP014520.1 713427 713900 3 + 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229914.peg.784 CDS AP014520.1 713897 714727 2 + 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229914.peg.785 CDS AP014520.1 714724 715158 1 + 435 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229914.peg.786 CDS AP014520.1 715324 716532 1 + 1209 Sodium/glutamate symport protein - none -
fig|6666666.229914.peg.787 CDS AP014520.1 717976 716588 -1 - 1389 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229914.peg.788 CDS AP014520.1 718716 718021 -3 - 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229914.peg.789 CDS AP014520.1 719171 718758 -2 - 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229914.peg.790 CDS AP014520.1 720262 719237 -1 - 1026 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229914.peg.791 CDS AP014520.1 720355 720612 1 + 258 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229914.peg.792 CDS AP014520.1 720617 722356 2 + 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229914.peg.793 CDS AP014520.1 722630 722493 -2 - 138 hypothetical protein - none -
fig|6666666.229914.peg.794 CDS AP014520.1 722616 723605 3 + 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229914.peg.795 CDS AP014520.1 724560 723703 -3 - 858 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229914.peg.796 CDS AP014520.1 724678 725103 1 + 426 Universal stress protein A Universal stress protein family
fig|6666666.229914.peg.797 CDS AP014520.1 725303 725455 2 + 153 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229914.peg.798 CDS AP014520.1 725458 727926 1 + 2469 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229914.peg.799 CDS AP014520.1 728049 728231 3 + 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229914.peg.800 CDS AP014520.1 728308 729627 1 + 1320 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229914.peg.801 CDS AP014520.1 729703 730590 1 + 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229914.peg.802 CDS AP014520.1 730721 730837 2 + 117 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229914.peg.803 CDS AP014520.1 730839 731060 3 + 222 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229914.peg.804 CDS AP014520.1 731148 731017 -3 - 132 hypothetical protein - none -
fig|6666666.229914.peg.805 CDS AP014520.1 731147 731881 2 + 735 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229914.peg.806 CDS AP014520.1 731899 732456 1 + 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229914.peg.807 CDS AP014520.1 732456 732875 3 + 420 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.229914.peg.808 CDS AP014520.1 732876 732989 3 + 114 hypothetical protein - none -
fig|6666666.229914.peg.809 CDS AP014520.1 734283 732973 -3 - 1311 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.229914.peg.810 CDS AP014520.1 734468 734352 -2 - 117 hypothetical protein - none -
fig|6666666.229914.peg.811 CDS AP014520.1 734692 734552 -1 - 141 hypothetical protein - none -
fig|6666666.229914.peg.812 CDS AP014520.1 736074 734923 -3 - 1152 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229914.peg.813 CDS AP014520.1 736592 736335 -2 - 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.814 CDS AP014520.1 737759 736671 -2 - 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229914.peg.815 CDS AP014520.1 737905 737756 -1 - 150 hypothetical protein - none -
fig|6666666.229914.peg.816 CDS AP014520.1 739145 737910 -2 - 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.817 CDS AP014520.1 739753 739157 -1 - 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.818 CDS AP014520.1 740386 739757 -1 - 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.819 CDS AP014520.1 741171 740386 -3 - 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.820 CDS AP014520.1 742399 741164 -1 - 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.821 CDS AP014520.1 743742 742402 -3 - 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.822 CDS AP014520.1 743934 743767 -3 - 168 hypothetical protein - none -
fig|6666666.229914.peg.823 CDS AP014520.1 744088 743972 -1 - 117 hypothetical protein - none -
fig|6666666.229914.peg.824 CDS AP014520.1 744409 744098 -1 - 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229914.peg.825 CDS AP014520.1 744514 745107 1 + 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229914.peg.826 CDS AP014520.1 745213 745088 -1 - 126 hypothetical protein - none -
fig|6666666.229914.peg.827 CDS AP014520.1 746687 745608 -2 - 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229914.peg.828 CDS AP014520.1 746968 746690 -1 - 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229914.peg.829 CDS AP014520.1 748205 746946 -2 - 1260 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229914.peg.830 CDS AP014520.1 748302 749069 3 + 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229914.peg.831 CDS AP014520.1 749099 749440 2 + 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229914.peg.832 CDS AP014520.1 749659 750657 1 + 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229914.peg.833 CDS AP014520.1 750738 752258 3 + 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229914.peg.834 CDS AP014520.1 752274 753332 3 + 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229914.peg.835 CDS AP014520.1 754321 753353 -1 - 969 tRNA-dihydrouridine synthase C (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229914.peg.836 CDS AP014520.1 755200 754325 -1 - 876 DnaJ-like protein DjlA - none -
fig|6666666.229914.peg.837 CDS AP014520.1 755926 755282 -1 - 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229914.peg.838 CDS AP014520.1 756652 755936 -1 - 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229914.peg.839 CDS AP014520.1 756651 756773 3 + 123 hypothetical protein - none -
fig|6666666.229914.peg.840 CDS AP014520.1 756770 757633 2 + 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229914.peg.841 CDS AP014520.1 757661 758548 2 + 888 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229914.peg.842 CDS AP014520.1 758667 759056 3 + 390 Patatin-like phospholipase - none -
fig|6666666.229914.peg.843 CDS AP014520.1 759131 759853 2 + 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229914.peg.844 CDS AP014520.1 759902 760015 2 + 114 hypothetical protein - none -
fig|6666666.229914.peg.845 CDS AP014520.1 760008 760856 3 + 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229914.peg.846 CDS AP014520.1 761164 761850 1 + 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229914.peg.847 CDS AP014520.1 761852 763168 2 + 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229914.peg.848 CDS AP014520.1 763178 765409 2 + 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229914.peg.849 CDS AP014520.1 765435 765791 3 + 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229914.peg.850 CDS AP014520.1 765807 765923 3 + 117 hypothetical protein - none -
fig|6666666.229914.peg.851 CDS AP014520.1 766003 766302 1 + 300 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229914.peg.852 CDS AP014520.1 767121 766321 -3 - 801 Orf2 - none -
fig|6666666.229914.peg.853 CDS AP014520.1 770373 767275 -3 - 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229914.peg.854 CDS AP014520.1 771544 770387 -1 - 1158 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229914.peg.855 CDS AP014520.1 772175 771609 -2 - 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229914.peg.856 CDS AP014520.1 773293 772376 -1 - 918 Cell division protein - none -
fig|6666666.229914.peg.857 CDS AP014520.1 775422 773317 -3 - 2106 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229914.peg.858 CDS AP014520.1 775741 776586 1 + 846 Involved in lipopolysaccharide biosynthesis - none -
fig|6666666.229914.peg.859 CDS AP014520.1 777614 776610 -2 - 1005 putative capsular polysaccharide synthesis protein - none -
fig|6666666.229914.peg.860 CDS AP014520.1 778470 777739 -3 - 732 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229914.peg.861 CDS AP014520.1 778727 778939 2 + 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229914.peg.862 CDS AP014520.1 779002 779694 1 + 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229914.peg.863 CDS AP014520.1 779695 780717 1 + 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229914.peg.864 CDS AP014520.1 780795 781778 3 + 984 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229914.peg.865 CDS AP014520.1 782638 781781 -1 - 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229914.peg.866 CDS AP014520.1 782848 782678 -1 - 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229914.peg.867 CDS AP014520.1 783033 782860 -3 - 174 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.229914.peg.868 CDS AP014520.1 783942 783283 -3 - 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229914.peg.869 CDS AP014520.1 784145 783993 -2 - 153 hypothetical protein - none -
fig|6666666.229914.peg.870 CDS AP014520.1 784120 785319 1 + 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229914.peg.871 CDS AP014520.1 785388 785843 3 + 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229914.peg.872 CDS AP014520.1 785843 786442 2 + 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229914.peg.873 CDS AP014520.1 786466 786594 1 + 129 FIG00696234: hypothetical protein - none -
fig|6666666.229914.peg.874 CDS AP014520.1 786721 787365 1 + 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229914.peg.875 CDS AP014520.1 788868 787498 -3 - 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229914.peg.876 CDS AP014520.1 789808 788963 -1 - 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229914.peg.877 CDS AP014520.1 792470 789903 -2 - 2568 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229914.peg.878 CDS AP014520.1 792604 793413 1 + 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229914.peg.879 CDS AP014520.1 793424 793942 2 + 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229914.peg.880 CDS AP014520.1 793939 794463 1 + 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229914.peg.881 CDS AP014520.1 794463 794855 3 + 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229914.peg.882 CDS AP014520.1 794876 796285 2 + 1410 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229914.peg.883 CDS AP014520.1 796499 797026 2 + 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229914.peg.884 CDS AP014520.1 797050 798138 1 + 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229914.peg.885 CDS AP014520.1 798141 798995 3 + 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229914.peg.886 CDS AP014520.1 799761 799234 -3 - 528 probable integral membrane protein NMA1777 - none -
fig|6666666.229914.peg.887 CDS AP014520.1 800114 799812 -2 - 303 probable integral membrane protein NMA1777 - none -
fig|6666666.229914.peg.888 CDS AP014520.1 800557 800114 -1 - 444 Transcriptional regulator, MarR family - none -
fig|6666666.229914.peg.889 CDS AP014520.1 800705 801820 2 + 1116 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.229914.peg.890 CDS AP014520.1 802404 802216 -3 - 189 hypothetical protein - none -
fig|6666666.229914.peg.891 CDS AP014520.1 802571 804742 2 + 2172 Hypothetical SecA-related protein - none -
fig|6666666.229914.peg.892 CDS AP014520.1 804956 805522 2 + 567 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229914.peg.893 CDS AP014520.1 806197 805712 -1 - 486 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229914.peg.894 CDS AP014520.1 806367 809198 3 + 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229914.peg.895 CDS AP014520.1 809276 809650 2 + 375 hypothetical protein - none -
fig|6666666.229914.peg.896 CDS AP014520.1 809803 809949 1 + 147 Mobile element protein - none -
fig|6666666.229914.peg.897 CDS AP014520.1 809943 810452 3 + 510 Mobile element protein - none -
fig|6666666.229914.peg.898 CDS AP014520.1 811032 810529 -3 - 504 Mercuric resistance operon regulatory protein - none -
fig|6666666.229914.peg.899 CDS AP014520.1 811371 811060 -3 - 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229914.peg.900 CDS AP014520.1 811517 811780 2 + 264 hypothetical protein - none -
fig|6666666.229914.peg.901 CDS AP014520.1 811790 814552 2 + 2763 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229914.peg.902 CDS AP014520.1 814629 815033 3 + 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229914.peg.903 CDS AP014520.1 816559 815525 -1 - 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229914.peg.904 CDS AP014520.1 817062 816559 -3 - 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229914.peg.905 CDS AP014520.1 817051 817179 1 + 129 hypothetical protein - none -
fig|6666666.229914.peg.906 CDS AP014520.1 819792 817204 -3 - 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229914.peg.907 CDS AP014520.1 819940 819770 -1 - 171 hypothetical protein - none -
fig|6666666.229914.peg.908 CDS AP014520.1 820028 819912 -2 - 117 hypothetical protein - none -
fig|6666666.229914.peg.909 CDS AP014520.1 820540 819983 -1 - 558 FIG00696423: hypothetical protein - none -
fig|6666666.229914.peg.910 CDS AP014520.1 820861 820568 -1 - 294 Uncharacterized protein HI0073 - none -
fig|6666666.229914.peg.911 CDS AP014520.1 821264 820845 -2 - 420 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229914.peg.912 CDS AP014520.1 822182 821355 -2 - 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229914.peg.913 CDS AP014520.1 823061 822198 -2 - 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229914.peg.914 CDS AP014520.1 824072 823140 -2 - 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229914.peg.915 CDS AP014520.1 824675 824139 -2 - 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229914.peg.916 CDS AP014520.1 825224 824814 -2 - 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229914.peg.917 CDS AP014520.1 825337 825948 1 + 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229914.peg.918 CDS AP014520.1 825972 827339 3 + 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229914.peg.919 CDS AP014520.1 827561 828310 2 + 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229914.peg.920 CDS AP014520.1 828831 828424 -3 - 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229914.peg.921 CDS AP014520.1 828970 830094 1 + 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229914.peg.922 CDS AP014520.1 830109 830468 3 + 360 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229914.peg.923 CDS AP014520.1 830490 830939 3 + 450 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229914.peg.924 CDS AP014520.1 831275 831409 2 + 135 hypothetical protein - none -
fig|6666666.229914.peg.925 CDS AP014520.1 832937 831558 -2 - 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229914.peg.926 CDS AP014520.1 833093 833884 2 + 792 FIG001154: CcsA-related protein - none -
fig|6666666.229914.peg.927 CDS AP014520.1 833959 835221 1 + 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229914.peg.928 CDS AP014520.1 835395 835865 3 + 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229914.peg.929 CDS AP014520.1 835869 836315 3 + 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229914.peg.930 CDS AP014520.1 836325 837095 3 + 771 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229914.peg.931 CDS AP014520.1 837956 837183 -2 - 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229914.peg.932 CDS AP014520.1 838559 838032 -2 - 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229914.peg.933 CDS AP014520.1 838721 839965 2 + 1245 Tryptophan-specific transport protein - none -
fig|6666666.229914.peg.934 CDS AP014520.1 839989 840306 1 + 318 hypothetical protein - none -
fig|6666666.229914.peg.935 CDS AP014520.1 840290 840559 2 + 270 hypothetical protein - none -
fig|6666666.229914.peg.936 CDS AP014520.1 841648 840941 -1 - 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229914.peg.937 CDS AP014520.1 841863 842390 3 + 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229914.peg.938 CDS AP014520.1 842411 843742 2 + 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229914.peg.939 CDS AP014520.1 843808 845349 1 + 1542 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229914.peg.940 CDS AP014520.1 845424 845302 -3 - 123 hypothetical protein - none -
fig|6666666.229914.peg.941 CDS AP014520.1 845458 846234 1 + 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229914.peg.942 CDS AP014520.1 846252 846746 3 + 495 Protein yfbU - none -
fig|6666666.229914.peg.943 CDS AP014520.1 847191 847361 3 + 171 hypothetical protein - none -
fig|6666666.229914.peg.944 CDS AP014520.1 847358 849610 2 + 2253 VgrG-3 protein - none -
fig|6666666.229914.peg.945 CDS AP014520.1 849614 850753 2 + 1140 Probable phospholipase protein - none -
fig|6666666.229914.peg.946 CDS AP014520.1 850750 851817 1 + 1068 Probable phospholipase protein - none -
fig|6666666.229914.peg.947 CDS AP014520.1 851817 852971 3 + 1155 hypothetical protein - none -
fig|6666666.229914.peg.948 CDS AP014520.1 853042 854214 1 + 1173 hypothetical protein - none -
fig|6666666.229914.peg.949 CDS AP014520.1 854340 854489 3 + 150 hypothetical protein - none -
fig|6666666.229914.peg.950 CDS AP014520.1 855150 854752 -3 - 399 Integrase - none -
fig|6666666.229914.peg.951 CDS AP014520.1 856317 855808 -3 - 510 unknown - none -
fig|6666666.229914.peg.952 CDS AP014520.1 856510 856304 -1 - 207 hypothetical protein - none -
fig|6666666.229914.peg.953 CDS AP014520.1 856871 856500 -2 - 372 FIG00696117: hypothetical protein - none -
fig|6666666.229914.peg.954 CDS AP014520.1 857520 856864 -3 - 657 FIG00698594: hypothetical protein - none -
fig|6666666.229914.peg.955 CDS AP014520.1 857811 857560 -3 - 252 hypothetical protein - none -
fig|6666666.229914.peg.956 CDS AP014520.1 858267 858061 -3 - 207 hypothetical protein - none -
fig|6666666.229914.peg.957 CDS AP014520.1 859094 858591 -2 - 504 hypothetical protein - none -
fig|6666666.229914.peg.958 CDS AP014520.1 859907 859167 -2 - 741 Phage antirepressor protein - none -
fig|6666666.229914.peg.959 CDS AP014520.1 860366 859992 -2 - 375 hypothetical protein - none -
fig|6666666.229914.peg.960 CDS AP014520.1 860611 860375 -1 - 237 FIG00696418: hypothetical protein - none -
fig|6666666.229914.peg.961 CDS AP014520.1 860931 860608 -3 - 324 hypothetical protein - none -
fig|6666666.229914.peg.962 CDS AP014520.1 861557 860946 -2 - 612 Phage Rha protein - none -
fig|6666666.229914.peg.963 CDS AP014520.1 861908 861660 -2 - 249 hypothetical protein - none -
fig|6666666.229914.peg.964 CDS AP014520.1 862128 861919 -3 - 210 possible prophage CP4-57 regulatory protein - none -
fig|6666666.229914.peg.965 CDS AP014520.1 863091 862315 -3 - 777 hypothetical protein - none -
fig|6666666.229914.peg.966 CDS AP014520.1 863772 863101 -3 - 672 hypothetical protein - none -
fig|6666666.229914.peg.967 CDS AP014520.1 865190 863946 -2 - 1245 Integrase - none -
fig|6666666.229914.peg.968 CDS AP014520.1 866312 866085 -2 - 228 FIG00354920: hypothetical protein - none -
fig|6666666.229914.peg.969 CDS AP014520.1 866773 866309 -1 - 465 Putative uncharacterized protein ydbH - none -
fig|6666666.229914.peg.970 CDS AP014520.1 868959 866779 -3 - 2181 Putative uncharacterized protein ydbH - none -
fig|6666666.229914.peg.971 CDS AP014520.1 869775 869146 -3 - 630 Multiple antibiotic resistance protein marC - none -
fig|6666666.229914.peg.972 CDS AP014520.1 869856 871781 3 + 1926 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229914.peg.973 CDS AP014520.1 871929 872987 3 + 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229914.peg.974 CDS AP014520.1 873069 873527 3 + 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229914.peg.975 CDS AP014520.1 873600 873989 3 + 390 Endoribonuclease L-PSP - none -
fig|6666666.229914.peg.976 CDS AP014520.1 876169 874058 -1 - 2112 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229914.peg.977 CDS AP014520.1 877141 876188 -1 - 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229914.peg.979 CDS AP014520.1 883204 884127 1 + 924 Mobile element protein - none -
fig|6666666.229914.peg.980 CDS AP014520.1 884861 884989 2 + 129 hypothetical protein - none -
fig|6666666.229914.peg.981 CDS AP014520.1 885959 885243 -2 - 717 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229914.peg.982 CDS AP014520.1 886236 885961 -3 - 276 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229914.peg.983 CDS AP014520.1 886655 888157 2 + 1503 Sodium-dependent transporter - none -
fig|6666666.229914.peg.984 CDS AP014520.1 888683 889327 2 + 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229914.peg.985 CDS AP014520.1 890418 889414 -3 - 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229914.peg.986 CDS AP014520.1 891587 890913 -2 - 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229914.peg.987 CDS AP014520.1 892264 891590 -1 - 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229914.peg.988 CDS AP014520.1 892416 892694 3 + 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229914.peg.989 CDS AP014520.1 892694 893389 2 + 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229914.peg.990 CDS AP014520.1 893386 893865 1 + 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229914.peg.991 CDS AP014520.1 893862 894872 3 + 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229914.peg.992 CDS AP014520.1 894904 895644 1 + 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229914.peg.993 CDS AP014520.1 895672 896247 1 + 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229914.peg.994 CDS AP014520.1 896262 896453 3 + 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229914.peg.995 CDS AP014520.1 896470 897639 1 + 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229914.peg.996 CDS AP014520.1 897957 897790 -3 - 168 hypothetical protein - none -
fig|6666666.229914.peg.997 CDS AP014520.1 898161 898006 -3 - 156 Mobile element protein - none -
fig|6666666.229914.peg.998 CDS AP014520.1 899414 898269 -2 - 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229914.peg.999 CDS AP014520.1 899975 899550 -2 - 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229914.peg.1000 CDS AP014520.1 901294 899987 -1 - 1308 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229914.peg.1001 CDS AP014520.1 901459 901337 -1 - 123 hypothetical protein - none -
fig|6666666.229914.peg.1002 CDS AP014520.1 901514 901732 2 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229914.peg.1003 CDS AP014520.1 903338 901794 -2 - 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229914.peg.1004 CDS AP014520.1 904625 903729 -2 - 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229914.peg.1005 CDS AP014520.1 904705 904833 1 + 129 hypothetical protein - none -
fig|6666666.229914.peg.1006 CDS AP014520.1 904871 905878 2 + 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229914.peg.1007 CDS AP014520.1 905917 906204 1 + 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229914.peg.1008 CDS AP014520.1 906201 907076 3 + 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229914.peg.1009 CDS AP014520.1 907091 908593 2 + 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229914.peg.1010 CDS AP014520.1 908787 910199 3 + 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229914.peg.1011 CDS AP014520.1 910186 911619 1 + 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229914.peg.1012 CDS AP014520.1 911898 913397 3 + 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229914.peg.1013 CDS AP014520.1 914692 913661 -1 - 1032 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229914.peg.1014 CDS AP014520.1 915840 914686 -3 - 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229914.peg.1015 CDS AP014520.1 916951 915908 -1 - 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229914.peg.1016 CDS AP014520.1 917193 918206 3 + 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229914.peg.1017 CDS AP014520.1 918421 919413 1 + 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229914.peg.1018 CDS AP014520.1 919488 919967 3 + 480 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229914.peg.1019 CDS AP014520.1 919974 921056 3 + 1083 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229914.peg.1020 CDS AP014520.1 921034 922044 1 + 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229914.peg.1021 CDS AP014520.1 923966 922119 -2 - 1848 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229914.peg.1022 CDS AP014520.1 923992 924126 1 + 135 hypothetical protein - none -
fig|6666666.229914.peg.1023 CDS AP014520.1 925327 924107 -1 - 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229914.peg.1024 CDS AP014520.1 925497 927515 3 + 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229914.peg.1025 CDS AP014520.1 927705 928997 3 + 1293 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229914.peg.1026 CDS AP014520.1 928957 930777 1 + 1821 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229914.peg.1027 CDS AP014520.1 931290 930886 -3 - 405 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229914.peg.1028 CDS AP014520.1 931419 931559 3 + 141 hypothetical protein - none -
fig|6666666.229914.peg.1029 CDS AP014520.1 931604 932521 2 + 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229914.peg.1030 CDS AP014520.1 932595 934271 3 + 1677 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229914.peg.1031 CDS AP014520.1 934985 934338 -2 - 648 Outer membrane protein W precursor - none -
fig|6666666.229914.peg.1032 CDS AP014520.1 935258 936016 2 + 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229914.peg.1033 CDS AP014520.1 936022 936573 1 + 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229914.peg.1034 CDS AP014520.1 936577 937047 1 + 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229914.peg.1035 CDS AP014520.1 937050 937346 3 + 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229914.peg.1036 CDS AP014520.1 937873 940089 1 + 2217 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229914.peg.1037 CDS AP014520.1 940122 940430 3 + 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229914.peg.1038 CDS AP014520.1 940408 940917 1 + 510 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229914.peg.1039 CDS AP014520.1 940939 941181 1 + 243 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229914.peg.1040 CDS AP014520.1 941438 941238 -2 - 201 hypothetical protein - none -
fig|6666666.229914.peg.1041 CDS AP014520.1 941509 941655 1 + 147 hypothetical protein - none -
fig|6666666.229914.peg.1042 CDS AP014520.1 942204 941875 -3 - 330 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915
fig|6666666.229914.peg.1043 CDS AP014520.1 944314 942377 -1 - 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229914.peg.1044 CDS AP014520.1 944948 944346 -2 - 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229914.peg.1045 CDS AP014520.1 945476 945033 -2 - 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229914.peg.1046 CDS AP014520.1 945547 946617 1 + 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229914.peg.1047 CDS AP014520.1 946686 947579 3 + 894 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229914.peg.1048 CDS AP014520.1 947579 948568 2 + 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229914.peg.1049 CDS AP014520.1 948568 949551 1 + 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229914.peg.1050 CDS AP014520.1 949551 950318 3 + 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229914.peg.1051 CDS AP014520.1 951355 950384 -1 - 972 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229914.peg.1052 CDS AP014520.1 951420 951608 3 + 189 hypothetical protein - none -
fig|6666666.229914.peg.1053 CDS AP014520.1 951664 953472 1 + 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229914.peg.1054 CDS AP014520.1 953477 954247 2 + 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229914.peg.1055 CDS AP014520.1 954259 954651 1 + 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229914.peg.1056 CDS AP014520.1 954661 955005 1 + 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229914.peg.1057 CDS AP014520.1 957240 955102 -3 - 2139 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229914.peg.1058 CDS AP014520.1 957511 958539 1 + 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.1059 CDS AP014520.1 959832 958618 -3 - 1215 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229914.peg.1060 CDS AP014520.1 960787 959957 -1 - 831 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229914.peg.1061 CDS AP014520.1 961009 961473 1 + 465 FIG00710847: hypothetical protein - none -
fig|6666666.229914.peg.1062 CDS AP014520.1 961446 962273 3 + 828 FIG00711691: hypothetical protein - none -
fig|6666666.229914.peg.1063 CDS AP014520.1 963608 962784 -2 - 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229914.peg.1064 CDS AP014520.1 964282 963659 -1 - 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229914.peg.1065 CDS AP014520.1 965205 964525 -3 - 681 FIG009095: D,D-carboxypeptidase family protein CBSS-584.1.peg.1352
fig|6666666.229914.peg.1066 CDS AP014520.1 966340 965207 -1 - 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229914.peg.1067 CDS AP014520.1 966821 966477 -2 - 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352
fig|6666666.229914.peg.1068 CDS AP014520.1 968767 966887 -1 - 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229914.peg.1069 CDS AP014520.1 968929 968801 -1 - 129 hypothetical protein - none -
fig|6666666.229914.peg.1070 CDS AP014520.1 970061 968901 -2 - 1161 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229914.peg.1071 CDS AP014520.1 971177 970260 -2 - 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) KDO2-Lipid A biosynthesis
fig|6666666.229914.peg.1072 CDS AP014520.1 972495 971215 -3 - 1281 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229914.peg.1073 CDS AP014520.1 973822 972551 -1 - 1272 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229914.peg.1074 CDS AP014520.1 974650 973883 -1 - 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229914.peg.1075 CDS AP014520.1 975576 974647 -3 - 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229914.peg.1076 CDS AP014520.1 977019 975589 -3 - 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229914.peg.1077 CDS AP014520.1 978154 977090 -1 - 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229914.peg.1078 CDS AP014520.1 979384 978194 -1 - 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229914.peg.1079 CDS AP014520.1 980703 979399 -3 - 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229914.peg.1080 CDS AP014520.1 981815 980730 -2 - 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229914.peg.1081 CDS AP014520.1 982999 981809 -1 - 1191 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229914.peg.1082 CDS AP014520.1 984658 983192 -1 - 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229914.peg.1083 CDS AP014520.1 986499 984676 -3 - 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229914.peg.1084 CDS AP014520.1 986834 986517 -2 - 318 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229914.peg.1085 CDS AP014520.1 987802 986834 -1 - 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229914.peg.1086 CDS AP014520.1 988370 987912 -2 - 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229914.peg.1087 CDS AP014520.1 990232 988634 -1 - 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229914.peg.1088 CDS AP014520.1 991460 990774 -2 - 687 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229914.peg.1089 CDS AP014520.1 992122 991460 -1 - 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229914.peg.1090 CDS AP014520.1 992846 992127 -2 - 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229914.peg.1091 CDS AP014520.1 993601 992867 -1 - 735 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229914.peg.1092 CDS AP014520.1 994326 993742 -3 - 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229914.peg.1093 CDS AP014520.1 997885 994415 -1 - 3471 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229914.peg.1094 CDS AP014520.1 998516 998241 -2 - 276 hypothetical protein - none -
fig|6666666.229914.peg.1095 CDS AP014520.1 1000479 998557 -3 - 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Archaea;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229914.peg.1096 CDS AP014520.1 1001181 1000483 -3 - 699 unknown - none -
fig|6666666.229914.peg.1097 CDS AP014520.1 1001916 1001344 -3 - 573 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229914.peg.1098 CDS AP014520.1 1003187 1003363 2 + 177 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229914.peg.1099 CDS AP014520.1 1003419 1004243 3 + 825 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229914.peg.1100 CDS AP014520.1 1004365 1005627 1 + 1263 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229914.peg.1101 CDS AP014520.1 1005624 1006127 3 + 504 Flp pilus assembly protein RcpB Widespread colonization island
fig|6666666.229914.peg.1102 CDS AP014520.1 1006143 1007267 3 + 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229914.peg.1103 CDS AP014520.1 1007281 1008561 1 + 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229914.peg.1104 CDS AP014520.1 1008561 1009448 3 + 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229914.peg.1105 CDS AP014520.1 1009445 1010311 2 + 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229914.peg.1106 CDS AP014520.1 1010340 1011062 3 + 723 Flp pilus assembly protein TadD, contains TPR repeat Widespread colonization island
fig|6666666.229914.peg.1107 CDS AP014520.1 1011982 1012299 1 + 318 Flp pilus assembly surface protein TadF, ATP/GTP-binding motif Widespread colonization island
fig|6666666.229914.peg.1108 CDS AP014520.1 1012315 1013931 1 + 1617 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229914.peg.1109 CDS AP014520.1 1014354 1014226 -3 - 129 hypothetical protein - none -
fig|6666666.229914.peg.1110 CDS AP014520.1 1014670 1014804 1 + 135 hypothetical protein - none -
fig|6666666.229914.peg.1111 CDS AP014520.1 1015061 1015336 2 + 276 Mobile element protein - none -
fig|6666666.229914.peg.1112 CDS AP014520.1 1015419 1015559 3 + 141 Mobile element protein - none -
fig|6666666.229914.peg.1113 CDS AP014520.1 1015596 1015844 3 + 249 Mobile element protein - none -
fig|6666666.229914.peg.1114 CDS AP014520.1 1017084 1016071 -3 - 1014 Mobile element protein - none -
fig|6666666.229914.peg.1115 CDS AP014520.1 1017161 1017952 2 + 792 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - none -
fig|6666666.229914.peg.1116 CDS AP014520.1 1019452 1019228 -1 - 225 hypothetical protein - none -
fig|6666666.229914.peg.1117 CDS AP014520.1 1019865 1019647 -3 - 219 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229914.peg.1118 CDS AP014520.1 1020014 1019895 -2 - 120 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229914.peg.1119 CDS AP014520.1 1020212 1020613 2 + 402 LysR family regulatory protein CidR - none -
fig|6666666.229914.peg.1120 CDS AP014520.1 1020759 1020622 -3 - 138 hypothetical protein - none -
fig|6666666.229914.peg.1121 CDS AP014520.1 1021096 1020818 -1 - 279 hypothetical protein - none -
fig|6666666.229914.peg.1122 CDS AP014520.1 1022782 1021118 -1 - 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229914.peg.1123 CDS AP014520.1 1023728 1022787 -2 - 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229914.peg.1124 CDS AP014520.1 1025260 1023731 -1 - 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229914.peg.1125 CDS AP014520.1 1025901 1025371 -3 - 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229914.peg.1126 CDS AP014520.1 1026584 1026000 -2 - 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229914.peg.1127 CDS AP014520.1 1026668 1026934 2 + 267 Protein yihD - none -
fig|6666666.229914.peg.1128 CDS AP014520.1 1026953 1027570 2 + 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229914.peg.1129 CDS AP014520.1 1027630 1027959 1 + 330 Protein yifE - none -
fig|6666666.229914.peg.1130 CDS AP014520.1 1028029 1029126 1 + 1098 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) RNA methylation;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229914.peg.1131 CDS AP014520.1 1029128 1029886 2 + 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229914.peg.1132 CDS AP014520.1 1029978 1030313 3 + 336 hypothetical protein - none -
fig|6666666.229914.peg.1133 CDS AP014520.1 1030368 1031741 3 + 1374 hypothetical protein - none -
fig|6666666.229914.peg.1134 CDS AP014520.1 1031743 1033062 1 + 1320 hypothetical protein - none -
fig|6666666.229914.peg.1135 CDS AP014520.1 1033788 1034015 3 + 228 hypothetical protein - none -
fig|6666666.229914.peg.1136 CDS AP014520.1 1034659 1037259 1 + 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229914.peg.1137 CDS AP014520.1 1038283 1037465 -1 - 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229914.peg.1138 CDS AP014520.1 1040153 1038477 -2 - 1677 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229914.peg.1139 CDS AP014520.1 1040221 1040349 1 + 129 hypothetical protein - none -
fig|6666666.229914.peg.1140 CDS AP014520.1 1041013 1040321 -1 - 693 Metal-dependent hydrolase - none -
fig|6666666.229914.peg.1141 CDS AP014520.1 1042371 1041031 -3 - 1341 FIG00782214: hypothetical protein - none -
fig|6666666.229914.peg.1142 CDS AP014520.1 1043748 1042396 -3 - 1353 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229914.peg.1143 CDS AP014520.1 1044613 1043837 -1 - 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229914.peg.1144 CDS AP014520.1 1045248 1044616 -3 - 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229914.peg.1145 CDS AP014520.1 1046489 1045245 -2 - 1245 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) - none -
fig|6666666.229914.peg.1146 CDS AP014520.1 1047313 1046492 -1 - 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229914.peg.1147 CDS AP014520.1 1047688 1048347 1 + 660 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229914.peg.1148 CDS AP014520.1 1048423 1048761 1 + 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229914.peg.1149 CDS AP014520.1 1048900 1049943 1 + 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229914.peg.1150 CDS AP014520.1 1049945 1050577 2 + 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229914.peg.1151 CDS AP014520.1 1050574 1051557 1 + 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229914.peg.1152 CDS AP014520.1 1051561 1052343 1 + 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229914.peg.1153 CDS AP014520.1 1052375 1052899 2 + 525 FIG00696143: hypothetical protein - none -
fig|6666666.229914.peg.1154 CDS AP014520.1 1053047 1054306 2 + 1260 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229914.peg.1155 CDS AP014520.1 1054722 1054537 -3 - 186 hypothetical protein - none -
fig|6666666.229914.peg.1156 CDS AP014520.1 1055651 1054929 -2 - 723 miscellaneous; hypothetical/partial homology - none -
fig|6666666.229914.peg.1157 CDS AP014520.1 1057864 1055687 -1 - 2178 Probable phospholipase protein - none -
fig|6666666.229914.peg.1158 CDS AP014520.1 1058491 1057868 -1 - 624 VgrG-3 protein - none -
fig|6666666.229914.peg.1159 CDS AP014520.1 1059405 1058722 -3 - 684 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229914.peg.1160 CDS AP014520.1 1059712 1061370 1 + 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229914.peg.1161 CDS AP014520.1 1061620 1062837 1 + 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229914.peg.1162 CDS AP014520.1 1062834 1063661 3 + 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229914.peg.1163 CDS AP014520.1 1065208 1063673 -1 - 1536 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.229914.peg.1164 CDS AP014520.1 1066069 1065323 -1 - 747 GTP-binding protein EngB Universal GTPases
fig|6666666.229914.peg.1165 CDS AP014520.1 1066068 1066943 3 + 876 Membrane protein LAPB - none -
fig|6666666.229914.peg.1166 CDS AP014520.1 1067515 1067039 -1 - 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) Biotin synthesis cluster;
RNA methylation
fig|6666666.229914.peg.1167 CDS AP014520.1 1068131 1067634 -2 - 498 Phospholipid-binding protein - none -
fig|6666666.229914.peg.1168 CDS AP014520.1 1068602 1068237 -2 - 366 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229914.peg.1169 CDS AP014520.1 1069078 1068674 -1 - 405 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229914.peg.1170 CDS AP014520.1 1069790 1069113 -2 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229914.peg.1171 CDS AP014520.1 1070817 1069780 -3 - 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229914.peg.1172 CDS AP014520.1 1071013 1071570 1 + 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229914.peg.1174 CDS AP014520.1 1077374 1078087 2 + 714 hypothetical protein - none -
fig|6666666.229914.peg.1175 CDS AP014520.1 1078050 1078388 3 + 339 hypothetical protein - none -
fig|6666666.229914.peg.1176 CDS AP014520.1 1078626 1078808 3 + 183 hypothetical protein - none -
fig|6666666.229914.peg.1177 CDS AP014520.1 1078947 1081442 3 + 2496 hypothetical protein - none -
fig|6666666.229914.peg.1178 CDS AP014520.1 1081886 1082443 2 + 558 hypothetical protein - none -
fig|6666666.229914.peg.1179 CDS AP014520.1 1084184 1082775 -2 - 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229914.peg.1180 CDS AP014520.1 1084254 1084766 3 + 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229914.peg.1181 CDS AP014520.1 1084860 1085015 3 + 156 hypothetical protein - none -
fig|6666666.229914.peg.1182 CDS AP014520.1 1085008 1085289 1 + 282 hypothetical protein - none -
fig|6666666.229914.peg.1183 CDS AP014520.1 1085292 1086080 3 + 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229914.peg.1184 CDS AP014520.1 1086574 1086107 -1 - 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229914.peg.1185 CDS AP014520.1 1086995 1086876 -2 - 120 hypothetical protein - none -
fig|6666666.229914.peg.1186 CDS AP014520.1 1089302 1087176 -2 - 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229914.peg.1187 CDS AP014520.1 1093742 1089555 -2 - 4188 Autotransporter adhesin - none -
fig|6666666.229914.peg.1188 CDS AP014520.1 1094922 1094806 -3 - 117 hypothetical protein - none -
fig|6666666.229914.peg.1189 CDS AP014520.1 1096726 1094939 -1 - 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229914.peg.1190 CDS AP014520.1 1096960 1096781 -1 - 180 hypothetical protein - none -
fig|6666666.229914.peg.1191 CDS AP014520.1 1096925 1100401 2 + 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229914.peg.1192 CDS AP014520.1 1100417 1100530 2 + 114 hypothetical protein - none -
fig|6666666.229914.peg.1193 CDS AP014520.1 1101479 1100802 -2 - 678 hypothetical protein - none -
fig|6666666.229914.peg.1194 CDS AP014520.1 1103871 1101637 -3 - 2235 hypothetical protein - none -
fig|6666666.229914.peg.1195 CDS AP014520.1 1104832 1103864 -1 - 969 hypothetical protein - none -
fig|6666666.229914.peg.1196 CDS AP014520.1 1106920 1105466 -1 - 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229914.peg.1197 CDS AP014520.1 1108759 1107410 -1 - 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229914.peg.1198 CDS AP014520.1 1110436 1109060 -1 - 1377 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229914.peg.1199 CDS AP014520.1 1111337 1110549 -2 - 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229914.peg.1200 CDS AP014520.1 1111925 1113370 2 + 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229914.peg.1201 CDS AP014520.1 1114594 1113548 -1 - 1047 Phage integrase - none -
fig|6666666.229914.peg.1202 CDS AP014520.1 1116351 1115623 -3 - 729 hypothetical protein - none -
fig|6666666.229914.peg.1203 CDS AP014520.1 1116791 1116660 -2 - 132 Phage protein - none -
fig|6666666.229914.peg.1204 CDS AP014520.1 1117458 1116835 -3 - 624 hypothetical protein - none -
fig|6666666.229914.peg.1205 CDS AP014520.1 1118348 1117455 -2 - 894 hypothetical protein - none -
fig|6666666.229914.peg.1206 CDS AP014520.1 1118659 1118360 -1 - 300 Phage protein - none -
fig|6666666.229914.peg.1207 CDS AP014520.1 1119181 1118906 -1 - 276 Phage protein - none -
fig|6666666.229914.peg.1208 CDS AP014520.1 1119925 1119269 -1 - 657 Phage Rha protein - none -
fig|6666666.229914.peg.1209 CDS AP014520.1 1120593 1120369 -3 - 225 hypothetical protein - none -
fig|6666666.229914.peg.1210 CDS AP014520.1 1121432 1120992 -2 - 441 GepA protein - none -
fig|6666666.229914.peg.1211 CDS AP014520.1 1122599 1123159 2 + 561 Phage protein - none -
fig|6666666.229914.peg.1212 CDS AP014520.1 1124194 1123451 -1 - 744 hypothetical protein - none -
fig|6666666.229914.peg.1213 CDS AP014520.1 1124720 1124346 -2 - 375 hypothetical protein - none -
fig|6666666.229914.peg.1214 CDS AP014520.1 1125497 1124781 -2 - 717 Transcriptional regulator - none -
fig|6666666.229914.peg.1215 CDS AP014520.1 1125655 1125795 1 + 141 putative Cro protein - none -
fig|6666666.229914.peg.1216 CDS AP014520.1 1125786 1126112 3 + 327 Phage protein - none -
fig|6666666.229914.peg.1217 CDS AP014520.1 1126164 1126883 3 + 720 Phage antirepressor protein - none -
fig|6666666.229914.peg.1218 CDS AP014520.1 1126883 1127041 2 + 159 Phage protein - none -
fig|6666666.229914.peg.1219 CDS AP014520.1 1127038 1127868 1 + 831 Primosomal protein I - none -
fig|6666666.229914.peg.1220 CDS AP014520.1 1127918 1129240 2 + 1323 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229914.peg.1221 CDS AP014520.1 1129237 1129767 1 + 531 FIG00696369: hypothetical protein - none -
fig|6666666.229914.peg.1222 CDS AP014520.1 1129757 1130167 2 + 411 Phage NinB DNA recombination - none -
fig|6666666.229914.peg.1223 CDS AP014520.1 1130164 1130916 1 + 753 Phage-associated homing endonuclease - none -
fig|6666666.229914.peg.1224 CDS AP014520.1 1130923 1131168 1 + 246 Phage protein - none -
fig|6666666.229914.peg.1225 CDS AP014520.1 1131168 1131371 3 + 204 Phage protein - none -
fig|6666666.229914.peg.1226 CDS AP014520.1 1131454 1131654 1 + 201 Phage protein - none -
fig|6666666.229914.peg.1227 CDS AP014520.1 1131651 1132013 3 + 363 Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA (EC 3.1.22.-) - none -
fig|6666666.229914.peg.1228 CDS AP014520.1 1132138 1132275 1 + 138 Q protein - none -
fig|6666666.229914.peg.1229 CDS AP014520.1 1132851 1133078 3 + 228 Phage protein - none -
fig|6666666.229914.peg.1230 CDS AP014520.1 1133243 1133443 2 + 201 Phage protein - none -
fig|6666666.229914.peg.1231 CDS AP014520.1 1133786 1134367 2 + 582 Phage endolysin Phage lysis modules
fig|6666666.229914.peg.1232 CDS AP014520.1 1134370 1134894 1 + 525 putative lytic protein Rz1 - none -
fig|6666666.229914.peg.1233 CDS AP014520.1 1134898 1135164 1 + 267 Phage protein - none -
fig|6666666.229914.peg.1234 CDS AP014520.1 1135321 1135887 1 + 567 Phage terminase, small subunit Phage packaging machinery
fig|6666666.229914.peg.1235 CDS AP014520.1 1135907 1137289 2 + 1383 Phage terminase, large subunit Phage packaging machinery
fig|6666666.229914.peg.1236 CDS AP014520.1 1137390 1138604 3 + 1215 Phage protein - none -
fig|6666666.229914.peg.1237 CDS AP014520.1 1138705 1140066 1 + 1362 Plasmid-related protein - none -
fig|6666666.229914.peg.1238 CDS AP014520.1 1140063 1140263 3 + 201 hypothetical protein - none -
fig|6666666.229914.peg.1239 CDS AP014520.1 1140324 1141079 3 + 756 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229914.peg.1240 CDS AP014520.1 1141049 1141435 2 + 387 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229914.peg.1241 CDS AP014520.1 1141449 1141898 3 + 450 Phage protein - none -
fig|6666666.229914.peg.1242 CDS AP014520.1 1141909 1142823 1 + 915 hypothetical protein - none -
fig|6666666.229914.peg.1243 CDS AP014520.1 1142827 1143192 1 + 366 hypothetical protein - none -
fig|6666666.229914.peg.1244 CDS AP014520.1 1143193 1143639 1 + 447 Phage protein - none -
fig|6666666.229914.peg.1245 CDS AP014520.1 1143636 1144007 3 + 372 hypothetical protein - none -
fig|6666666.229914.peg.1246 CDS AP014520.1 1143979 1144434 1 + 456 hypothetical protein - none -
fig|6666666.229914.peg.1247 CDS AP014520.1 1144439 1145947 2 + 1509 Phage-related protein - none -
fig|6666666.229914.peg.1248 CDS AP014520.1 1145996 1146286 2 + 291 FIG01217275: hypothetical protein - none -
fig|6666666.229914.peg.1249 CDS AP014520.1 1146256 1146426 1 + 171 FIG01217275: hypothetical protein - none -
fig|6666666.229914.peg.1250 CDS AP014520.1 1146426 1146806 3 + 381 hypothetical protein - none -
fig|6666666.229914.peg.1251 CDS AP014520.1 1146992 1149100 2 + 2109 Phage tape measure protein Phage tail proteins
fig|6666666.229914.peg.1252 CDS AP014520.1 1149104 1149913 2 + 810 FIG01218156: hypothetical protein - none -
fig|6666666.229914.peg.1253 CDS AP014520.1 1150021 1150218 1 + 198 Phage protein - none -
fig|6666666.229914.peg.1254 CDS AP014520.1 1150506 1151360 3 + 855 FIG00643583: hypothetical protein - none -
fig|6666666.229914.peg.1255 CDS AP014520.1 1151357 1152001 2 + 645 Phage baseplate (uncharacterized for now) Phage baseplate proteins
fig|6666666.229914.peg.1256 CDS AP014520.1 1151998 1152357 1 + 360 phage-related protein - none -
fig|6666666.229914.peg.1257 CDS AP014520.1 1152387 1153529 3 + 1143 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229914.peg.1258 CDS AP014520.1 1153529 1154104 2 + 576 FIG00696337: hypothetical protein - none -
fig|6666666.229914.peg.1259 CDS AP014520.1 1154115 1155797 3 + 1683 Phage tail fibers Phage tail fiber proteins
fig|6666666.229914.peg.1260 CDS AP014520.1 1155803 1156408 2 + 606 Phage tail fibers Phage tail fiber proteins
fig|6666666.229914.peg.1261 CDS AP014520.1 1156389 1156649 3 + 261 Phage tail fibers Phage tail fiber proteins
fig|6666666.229914.peg.1262 CDS AP014520.1 1157185 1157394 1 + 210 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.229914.peg.1263 CDS AP014520.1 1158424 1157492 -1 - 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229914.peg.1264 CDS AP014520.1 1159378 1158506 -1 - 873 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229914.peg.1265 CDS AP014520.1 1160365 1159400 -1 - 966 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229914.peg.1266 CDS AP014520.1 1161870 1160362 -3 - 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229914.peg.1267 CDS AP014520.1 1162300 1161881 -1 - 420 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229914.peg.1268 CDS AP014520.1 1162520 1163119 2 + 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229914.peg.1269 CDS AP014520.1 1163122 1163919 1 + 798 Protein of unknown function DUF81 - none -
fig|6666666.229914.peg.1270 CDS AP014520.1 1163928 1164725 3 + 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229914.peg.1271 CDS AP014520.1 1164722 1165573 2 + 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229914.peg.1272 CDS AP014520.1 1165898 1166425 2 + 528 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229914.peg.1273 CDS AP014520.1 1167001 1166651 -1 - 351 hypothetical protein - none -
fig|6666666.229914.peg.1274 CDS AP014520.1 1167543 1167358 -3 - 186 hypothetical protein - none -
fig|6666666.229914.peg.1275 CDS AP014520.1 1168483 1167995 -1 - 489 hypothetical protein - none -
fig|6666666.229914.peg.1276 CDS AP014520.1 1169478 1168519 -3 - 960 Probable phospholipase protein - none -
fig|6666666.229914.peg.1277 CDS AP014520.1 1169639 1169475 -2 - 165 Probable phospholipase protein - none -
fig|6666666.229914.peg.1278 CDS AP014520.1 1171054 1170152 -1 - 903 hypothetical protein - none -
fig|6666666.229914.peg.1279 CDS AP014520.1 1173162 1171039 -3 - 2124 VgrG-3 protein - none -
fig|6666666.229914.peg.1280 CDS AP014520.1 1173329 1173159 -2 - 171 hypothetical protein - none -
fig|6666666.229914.peg.1281 CDS AP014520.1 1174722 1173610 -3 - 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229914.peg.1282 CDS AP014520.1 1174895 1176955 2 + 2061 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229914.peg.1283 CDS AP014520.1 1177283 1177089 -2 - 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229914.peg.1284 CDS AP014520.1 1177624 1177283 -1 - 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229914.peg.1285 CDS AP014520.1 1179495 1177636 -3 - 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229914.peg.1286 CDS AP014520.1 1180037 1179516 -2 - 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229914.peg.1287 CDS AP014520.1 1180372 1180049 -1 - 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229914.peg.1288 CDS AP014520.1 1180887 1180504 -3 - 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229914.peg.1289 CDS AP014520.1 1182161 1180947 -2 - 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229914.peg.1290 CDS AP014520.1 1182688 1182215 -1 - 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229914.peg.1291 CDS AP014520.1 1183408 1182773 -1 - 636 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229914.peg.1292 CDS AP014520.1 1183639 1184439 1 + 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229914.peg.1293 CDS AP014520.1 1184559 1184443 -3 - 117 hypothetical protein - none -
fig|6666666.229914.peg.1294 CDS AP014520.1 1184753 1184595 -2 - 159 hypothetical protein - none -
fig|6666666.229914.peg.1295 CDS AP014520.1 1185279 1185130 -3 - 150 hypothetical protein - none -
fig|6666666.229914.peg.1296 CDS AP014520.1 1185734 1185534 -2 - 201 Mobile element protein - none -
fig|6666666.229914.peg.1297 CDS AP014520.1 1185861 1185736 -3 - 126 Mobile element protein - none -
fig|6666666.229914.peg.1298 CDS AP014520.1 1186178 1187539 2 + 1362 hypothetical protein - none -
fig|6666666.229914.peg.1299 CDS AP014520.1 1188416 1190548 2 + 2133 hypothetical protein - none -
fig|6666666.229914.peg.1300 CDS AP014520.1 1190588 1191727 2 + 1140 hypothetical protein - none -
fig|6666666.229914.peg.1301 CDS AP014520.1 1192065 1191874 -3 - 192 Mobile element protein - none -
fig|6666666.229914.peg.1302 CDS AP014520.1 1192242 1192099 -3 - 144 hypothetical protein - none -
fig|6666666.229914.peg.1303 CDS AP014520.1 1192392 1192598 3 + 207 Tfp pilus assembly protein, pilus retraction ATPase PilT - none -
fig|6666666.229914.peg.1304 CDS AP014520.1 1193038 1193553 1 + 516 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229914.peg.1305 CDS AP014520.1 1193568 1194206 3 + 639 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229914.peg.1306 CDS AP014520.1 1194230 1195225 2 + 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229914.peg.1307 CDS AP014520.1 1195432 1195647 1 + 216 Thioredoxin - none -
fig|6666666.229914.peg.1308 CDS AP014520.1 1196805 1195846 -3 - 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229914.peg.1309 CDS AP014520.1 1197037 1196915 -1 - 123 hypothetical protein - none -
fig|6666666.229914.peg.1310 CDS AP014520.1 1197272 1200163 2 + 2892 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229914.peg.1311 CDS AP014520.1 1200990 1200601 -3 - 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229914.peg.1312 CDS AP014520.1 1202838 1201069 -3 - 1770 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229914.peg.1313 CDS AP014520.1 1203002 1203571 2 + 570 Lysine decarboxylase family - none -
fig|6666666.229914.peg.1314 CDS AP014520.1 1203781 1204047 1 + 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229914.peg.1315 CDS AP014520.1 1204057 1204299 1 + 243 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.229914.peg.1316 CDS AP014520.1 1204458 1205165 3 + 708 Aerobic respiration control protein arcA - none -
fig|6666666.229914.peg.1317 CDS AP014520.1 1206271 1205273 -1 - 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229914.peg.1318 CDS AP014520.1 1207251 1206268 -3 - 984 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229914.peg.1319 CDS AP014520.1 1208126 1207254 -2 - 873 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229914.peg.1320 CDS AP014520.1 1208353 1208207 -1 - 147 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229914.peg.1321 CDS AP014520.1 1208489 1208322 -2 - 168 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229914.peg.1322 CDS AP014520.1 1209127 1208465 -1 - 663 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229914.peg.1323 CDS AP014520.1 1210853 1209270 -2 - 1584 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229914.peg.1324 CDS AP014520.1 1211220 1211681 3 + 462 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229914.peg.1325 CDS AP014520.1 1211653 1211772 1 + 120 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229914.peg.1326 CDS AP014520.1 1212944 1211769 -2 - 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229914.peg.1327 CDS AP014520.1 1213898 1212981 -2 - 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229914.peg.1328 CDS AP014520.1 1214908 1213976 -1 - 933 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229914.peg.1329 CDS AP014520.1 1215236 1214979 -2 - 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229914.peg.1330 CDS AP014520.1 1215568 1215257 -1 - 312 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229914.peg.1331 CDS AP014520.1 1215834 1216805 3 + 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229914.peg.1332 CDS AP014520.1 1216807 1217538 1 + 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229914.peg.1333 CDS AP014520.1 1217703 1217554 -3 - 150 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) CBSS-87626.3.peg.3639;
Ubiquinone Biosynthesis
fig|6666666.229914.peg.1334 CDS AP014520.1 1217932 1217813 -1 - 120 hypothetical protein - none -
fig|6666666.229914.peg.1335 CDS AP014520.1 1218040 1219464 1 + 1425 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229914.peg.1336 CDS AP014520.1 1220088 1219522 -3 - 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229914.peg.1337 CDS AP014520.1 1221504 1220152 -3 - 1353 Histidine permease YuiF - none -
fig|6666666.229914.peg.1338 CDS AP014520.1 1222508 1221855 -2 - 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229914.peg.1339 CDS AP014520.1 1223002 1222595 -1 - 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229914.peg.1340 CDS AP014520.1 1225113 1223161 -3 - 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229914.peg.1341 CDS AP014520.1 1225513 1226844 1 + 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229914.peg.1342 CDS AP014520.1 1226987 1229554 2 + 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229914.peg.1343 CDS AP014520.1 1230359 1229634 -2 - 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229914.peg.1344 CDS AP014520.1 1230958 1230431 -1 - 528 membrane protein, putative - none -
fig|6666666.229914.peg.1345 CDS AP014520.1 1231166 1232944 2 + 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229914.peg.1346 CDS AP014520.1 1233651 1233187 -3 - 465 Mobile element protein - none -
fig|6666666.229914.peg.1347 CDS AP014520.1 1233791 1233645 -2 - 147 Mobile element protein - none -
fig|6666666.229914.peg.1348 CDS AP014520.1 1234318 1233944 -1 - 375 hypothetical protein - none -
fig|6666666.229914.peg.1349 CDS AP014520.1 1234592 1235860 2 + 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229914.peg.1350 CDS AP014520.1 1236041 1236412 2 + 372 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) Folate Biosynthesis
fig|6666666.229914.peg.1351 CDS AP014520.1 1236446 1237186 2 + 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229914.peg.1352 CDS AP014520.1 1237198 1237608 1 + 411 excinuclease ABC subunit A - none -
fig|6666666.229914.peg.1353 CDS AP014520.1 1237664 1238236 2 + 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229914.peg.1354 CDS AP014520.1 1238300 1238914 2 + 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229914.peg.1355 CDS AP014520.1 1238929 1239942 1 + 1014 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229914.peg.1356 CDS AP014520.1 1240307 1239996 -2 - 312 Chromosome segregation ATPases - none -
fig|6666666.229914.peg.1357 CDS AP014520.1 1240864 1242324 1 + 1461 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229914.peg.1358 CDS AP014520.1 1242339 1243475 3 + 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229914.peg.1359 CDS AP014520.1 1243993 1244397 1 + 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229914.peg.1360 CDS AP014520.1 1244427 1245116 3 + 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229914.peg.1361 CDS AP014520.1 1245202 1245624 1 + 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229914.peg.1362 CDS AP014520.1 1245641 1246789 2 + 1149 TolA protein Ton and Tol transport systems
fig|6666666.229914.peg.1363 CDS AP014520.1 1246824 1248104 3 + 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229914.peg.1364 CDS AP014520.1 1248119 1248586 2 + 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229914.peg.1365 CDS AP014520.1 1249193 1249810 2 + 618 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229914.peg.1366 CDS AP014520.1 1249824 1250540 3 + 717 Type II secretory pathway, component PulJ - none -
fig|6666666.229914.peg.1367 CDS AP014520.1 1250537 1251232 2 + 696 FIG00696574: hypothetical protein - none -
fig|6666666.229914.peg.1368 CDS AP014520.1 1251207 1251509 3 + 303 FIG00696353: hypothetical protein - none -
fig|6666666.229914.peg.1369 CDS AP014520.1 1251555 1254944 3 + 3390 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229914.peg.1370 CDS AP014520.1 1255389 1254946 -3 - 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229914.peg.1371 CDS AP014520.1 1255848 1255399 -3 - 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229914.peg.1372 CDS AP014520.1 1255904 1256908 2 + 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229914.peg.1373 CDS AP014520.1 1256995 1257144 1 + 150 hypothetical protein - none -
fig|6666666.229914.peg.1374 CDS AP014520.1 1257147 1257287 3 + 141 hypothetical protein - none -
fig|6666666.229914.peg.1375 CDS AP014520.1 1257524 1258066 2 + 543 hypothetical protein - none -
fig|6666666.229914.peg.1376 CDS AP014520.1 1258200 1259462 3 + 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis;
YrdC-YciO-Sua5 protein family
fig|6666666.229914.peg.1377 CDS AP014520.1 1260569 1261108 2 + 540 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229914.peg.1378 CDS AP014520.1 1261087 1264254 1 + 3168 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229914.peg.1379 CDS AP014520.1 1264323 1266446 3 + 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229914.peg.1380 CDS AP014520.1 1266461 1267894 2 + 1434 Microcin H47 secretion protein - none -
fig|6666666.229914.peg.1381 CDS AP014520.1 1268305 1270185 1 + 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229914.peg.1382 CDS AP014520.1 1270263 1271411 3 + 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229914.peg.1383 CDS AP014520.1 1271489 1272001 2 + 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229914.peg.1384 CDS AP014520.1 1273115 1272105 -2 - 1011 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229914.peg.1385 CDS AP014520.1 1274014 1273118 -1 - 897 Inosose dehydratase (EC 4.2.1.44) Inositol catabolism
fig|6666666.229914.peg.1386 CDS AP014520.1 1276003 1274069 -1 - 1935 Epi-inositol hydrolase (EC 3.7.1.-) Inositol catabolism
fig|6666666.229914.peg.1387 CDS AP014520.1 1276313 1278223 2 + 1911 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain Inositol catabolism;
Inositol catabolism
fig|6666666.229914.peg.1388 CDS AP014520.1 1279099 1278260 -1 - 840 Predicted transcriptional regulator of the myo-inositol catabolic operon Inositol catabolism
fig|6666666.229914.peg.1389 CDS AP014520.1 1279480 1279668 1 + 189 VgrG-3 protein - none -
fig|6666666.229914.peg.1390 CDS AP014520.1 1279791 1280156 3 + 366 hypothetical protein - none -
fig|6666666.229914.peg.1391 CDS AP014520.1 1280165 1280920 2 + 756 hypothetical protein - none -
fig|6666666.229914.peg.1392 CDS AP014520.1 1280957 1281286 2 + 330 hypothetical protein - none -
fig|6666666.229914.peg.1393 CDS AP014520.1 1281317 1282150 2 + 834 hypothetical protein - none -
fig|6666666.229914.peg.1394 CDS AP014520.1 1282160 1282813 2 + 654 hypothetical protein - none -
fig|6666666.229914.peg.1395 CDS AP014520.1 1283556 1282882 -3 - 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229914.peg.1396 CDS AP014520.1 1284094 1283633 -1 - 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229914.peg.1397 CDS AP014520.1 1285921 1284149 -1 - 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229914.peg.1398 CDS AP014520.1 1286266 1287357 1 + 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229914.peg.1399 CDS AP014520.1 1287449 1288198 2 + 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229914.peg.1400 CDS AP014520.1 1288239 1289099 3 + 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229914.peg.1401 CDS AP014520.1 1289093 1289788 2 + 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229914.peg.1402 CDS AP014520.1 1290456 1291412 3 + 957 hypothetical protein - none -
fig|6666666.229914.peg.1403 CDS AP014520.1 1291469 1291837 2 + 369 hypothetical protein - none -
fig|6666666.229914.peg.1404 CDS AP014520.1 1291858 1293936 1 + 2079 hypothetical protein - none -
fig|6666666.229914.peg.1405 CDS AP014520.1 1293949 1294347 1 + 399 hypothetical protein - none -
fig|6666666.229914.peg.1406 CDS AP014520.1 1294667 1295158 2 + 492 hypothetical protein - none -
fig|6666666.229914.peg.1407 CDS AP014520.1 1296442 1295228 -1 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229914.peg.1408 CDS AP014520.1 1296737 1296931 2 + 195 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229914.peg.1409 CDS AP014520.1 1297419 1297195 -3 - 225 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229914.peg.1410 CDS AP014520.1 1297584 1298318 3 + 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229914.peg.1411 CDS AP014520.1 1298409 1299242 3 + 834 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229914.peg.1412 CDS AP014520.1 1300143 1299538 -3 - 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229914.peg.1413 CDS AP014520.1 1301641 1300247 -1 - 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229914.peg.1414 CDS AP014520.1 1301851 1302300 1 + 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229914.peg.1415 CDS AP014520.1 1302339 1303286 3 + 948 RNA-binding domain protein - none -
fig|6666666.229914.peg.1416 CDS AP014520.1 1303297 1304295 1 + 999 FIG00556979: hypothetical protein - none -
fig|6666666.229914.peg.1417 CDS AP014520.1 1304333 1307197 2 + 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229914.peg.1418 CDS AP014520.1 1307264 1308157 2 + 894 hypothetical protein - none -
fig|6666666.229914.peg.1419 CDS AP014520.1 1308396 1308154 -3 - 243 HipA protein Persister Cells
fig|6666666.229914.peg.1420 CDS AP014520.1 1308638 1308817 2 + 180 hypothetical protein - none -
fig|6666666.229914.peg.1421 CDS AP014520.1 1309052 1308771 -2 - 282 HipB protein Persister Cells
fig|6666666.229914.peg.1422 CDS AP014520.1 1310710 1309196 -1 - 1515 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229914.peg.1423 CDS AP014520.1 1311325 1310723 -1 - 603 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229914.peg.1424 CDS AP014520.1 1311709 1311413 -1 - 297 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229914.peg.1425 CDS AP014520.1 1312187 1312570 2 + 384 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229914.peg.1426 CDS AP014520.1 1314668 1312689 -2 - 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229914.peg.1427 CDS AP014520.1 1315529 1314741 -2 - 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229914.peg.1428 CDS AP014520.1 1316252 1315620 -2 - 633 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229914.peg.1429 CDS AP014520.1 1316374 1316249 -1 - 126 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229914.peg.1430 CDS AP014520.1 1317273 1316599 -3 - 675 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229914.peg.1431 CDS AP014520.1 1317659 1317234 -2 - 426 Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229914.peg.1432 CDS AP014520.1 1317995 1318960 2 + 966 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229914.peg.1433 CDS AP014520.1 1318957 1322244 1 + 3288 CRISPR-associated helicase Cas3, Yersinia-type CRISPRs
fig|6666666.229914.peg.1434 CDS AP014520.1 1322853 1322290 -3 - 564 CRISPR-associated protein, Csy4 family CRISPRs
fig|6666666.229914.peg.1435 CDS AP014520.1 1323866 1322856 -2 - 1011 CRISPR-associated protein, Csy3 family CRISPRs
fig|6666666.229914.peg.1436 CDS AP014520.1 1324825 1323866 -1 - 960 CRISPR-associated protein, Csy2 family CRISPRs
fig|6666666.229914.peg.1437 CDS AP014520.1 1326181 1324835 -1 - 1347 CRISPR-associated protein, Csy1 family CRISPRs
fig|6666666.229914.peg.1438 CDS AP014520.1 1326704 1326591 -2 - 114 hypothetical protein - none -
fig|6666666.229914.peg.1439 CDS AP014520.1 1326921 1328432 3 + 1512 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) Inositol catabolism
fig|6666666.229914.peg.1440 CDS AP014520.1 1328523 1329662 3 + 1140 Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229914.peg.1441 CDS AP014520.1 1330054 1330902 1 + 849 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229914.peg.1442 CDS AP014520.1 1330986 1331918 3 + 933 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229914.peg.1443 CDS AP014520.1 1331987 1333162 2 + 1176 Inositol transport system ATP-binding protein Inositol catabolism
fig|6666666.229914.peg.1444 CDS AP014520.1 1333174 1333491 1 + 318 Inositol transport system ATP-binding protein Inositol catabolism
fig|6666666.229914.peg.1445 CDS AP014520.1 1333542 1334495 3 + 954 Inositol transport system permease protein Inositol catabolism
fig|6666666.229914.peg.1446 CDS AP014520.1 1337200 1334579 -1 - 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229914.peg.1447 CDS AP014520.1 1337330 1337470 2 + 141 hypothetical protein - none -
fig|6666666.229914.peg.1448 CDS AP014520.1 1340176 1337549 -1 - 2628 Iron siderophore receptor protein - none -
fig|6666666.229914.peg.1449 CDS AP014520.1 1341397 1340396 -1 - 1002 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229914.peg.1450 CDS AP014520.1 1343228 1341378 -2 - 1851 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229914.peg.1451 CDS AP014520.1 1343558 1343259 -2 - 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229914.peg.1452 CDS AP014520.1 1345000 1343849 -1 - 1152 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229914.peg.1453 CDS AP014520.1 1345469 1346605 2 + 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229914.peg.1454 CDS AP014520.1 1347740 1346649 -2 - 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229914.peg.1455 CDS AP014520.1 1348370 1347831 -2 - 540 hypothetical protein - none -
fig|6666666.229914.peg.1456 CDS AP014520.1 1348897 1348487 -1 - 411 ABC-type Fe3+-hydroxamate transport system, periplasmic component - none -
fig|6666666.229914.peg.1457 CDS AP014520.1 1350516 1349170 -3 - 1347 FIG00849539: hypothetical protein - none -
fig|6666666.229914.peg.1458 CDS AP014520.1 1352562 1350907 -3 - 1656 FIG00698381: hypothetical protein - none -
fig|6666666.229914.peg.1459 CDS AP014520.1 1353682 1352609 -1 - 1074 FIG00697578: hypothetical protein - none -
fig|6666666.229914.peg.1460 CDS AP014520.1 1353978 1353694 -3 - 285 hypothetical protein - none -
fig|6666666.229914.peg.1461 CDS AP014520.1 1355009 1354119 -2 - 891 transcriptional regulator, putative - none -
fig|6666666.229914.peg.1462 CDS AP014520.1 1355406 1355293 -3 - 114 hypothetical protein - none -
fig|6666666.229914.peg.1463 CDS AP014520.1 1356916 1355528 -1 - 1389 Putative protease - none -
fig|6666666.229914.peg.1464 CDS AP014520.1 1357531 1357088 -1 - 444 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229914.peg.1465 CDS AP014520.1 1357872 1358210 3 + 339 conserved hypothetical protein - none -
fig|6666666.229914.peg.1466 CDS AP014520.1 1358562 1358272 -3 - 291 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.1467 CDS AP014520.1 1358806 1358552 -1 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.1468 CDS AP014520.1 1360018 1359257 -1 - 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229914.peg.1469 CDS AP014520.1 1360086 1360208 3 + 123 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229914.peg.1470 CDS AP014520.1 1360205 1360552 2 + 348 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229914.peg.1471 CDS AP014520.1 1361971 1360640 -1 - 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229914.peg.1472 CDS AP014520.1 1363079 1361982 -2 - 1098 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229914.peg.1473 CDS AP014520.1 1364236 1363154 -1 - 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229914.peg.1474 CDS AP014520.1 1364435 1364767 2 + 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229914.peg.1475 CDS AP014520.1 1364875 1364729 -1 - 147 hypothetical protein - none -
fig|6666666.229914.peg.1476 CDS AP014520.1 1366511 1364922 -2 - 1590 L-lactate permease Lactate utilization
fig|6666666.229914.peg.1477 CDS AP014520.1 1367898 1366753 -3 - 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229914.peg.1478 CDS AP014520.1 1368345 1368199 -3 - 147 hypothetical protein - none -
fig|6666666.229914.peg.1479 CDS AP014520.1 1369472 1368522 -2 - 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229914.peg.1480 CDS AP014520.1 1370423 1369566 -2 - 858 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229914.peg.1481 CDS AP014520.1 1371064 1370420 -1 - 645 Outer membrane lipoprotein LolB A Gammaproteobacteria Cluster Relating to Translation;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229914.peg.1482 CDS AP014520.1 1372384 1371107 -1 - 1278 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229914.peg.1483 CDS AP014520.1 1372995 1372384 -3 - 612 SH3 domain protein - none -
fig|6666666.229914.peg.1484 CDS AP014520.1 1374329 1373064 -2 - 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229914.peg.1485 CDS AP014520.1 1375035 1374355 -3 - 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229914.peg.1486 CDS AP014520.1 1375200 1376354 3 + 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229914.peg.1487 CDS AP014520.1 1376357 1377730 2 + 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229914.peg.1488 CDS AP014520.1 1378091 1377978 -2 - 114 hypothetical protein - none -
fig|6666666.229914.peg.1489 CDS AP014520.1 1378822 1378178 -1 - 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229914.peg.1490 CDS AP014520.1 1379965 1378955 -1 - 1011 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229914.peg.1491 CDS AP014520.1 1380593 1380252 -2 - 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229914.peg.1492 CDS AP014520.1 1381615 1380599 -1 - 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229914.peg.1493 CDS AP014520.1 1381809 1382195 3 + 387 Integral membrane protein - none -
fig|6666666.229914.peg.1494 CDS AP014520.1 1382320 1383651 1 + 1332 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229914.peg.1495 CDS AP014520.1 1385025 1383679 -3 - 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229914.peg.1496 CDS AP014520.1 1385914 1385057 -1 - 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229914.peg.1497 CDS AP014520.1 1386930 1385977 -3 - 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229914.peg.1498 CDS AP014520.1 1388711 1389622 2 + 912 hypothetical protein - none -
fig|6666666.229914.peg.1499 CDS AP014520.1 1391613 1390054 -3 - 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229914.peg.1500 CDS AP014520.1 1391911 1391645 -1 - 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.1501 CDS AP014520.1 1392195 1391923 -3 - 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.1502 CDS AP014520.1 1392394 1392236 -1 - 159 hypothetical protein - none -
fig|6666666.229914.peg.1503 CDS AP014520.1 1393802 1392450 -2 - 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229914.peg.1504 CDS AP014520.1 1393896 1394042 3 + 147 hypothetical protein - none -
fig|6666666.229914.peg.1505 CDS AP014520.1 1394366 1394178 -2 - 189 hypothetical protein - none -
fig|6666666.229914.peg.1506 CDS AP014520.1 1394479 1394682 1 + 204 Mobile element protein - none -
fig|6666666.229914.peg.1507 CDS AP014520.1 1394689 1394823 1 + 135 Mobile element protein - none -
fig|6666666.229914.peg.1508 CDS AP014520.1 1394848 1395036 1 + 189 Mobile element protein - none -
fig|6666666.229914.peg.1509 CDS AP014520.1 1395661 1395179 -1 - 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229914.peg.1510 CDS AP014520.1 1396317 1395676 -3 - 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229914.peg.1511 CDS AP014520.1 1397391 1396321 -3 - 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229914.peg.1512 CDS AP014520.1 1397608 1398300 1 + 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229914.peg.1513 CDS AP014520.1 1398992 1398405 -2 - 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229914.peg.1514 CDS AP014520.1 1399641 1399057 -3 - 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229914.peg.1515 CDS AP014520.1 1400013 1399654 -3 - 360 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229914.peg.1516 CDS AP014520.1 1401741 1400023 -3 - 1719 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229914.peg.1517 CDS AP014520.1 1401818 1402666 2 + 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229914.peg.1518 CDS AP014520.1 1402936 1404525 1 + 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229914.peg.1519 CDS AP014520.1 1404701 1404865 2 + 165 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229914.peg.1520 CDS AP014520.1 1404826 1406037 1 + 1212 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229914.peg.1521 CDS AP014520.1 1406721 1406131 -3 - 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229914.peg.1522 CDS AP014520.1 1406913 1407971 3 + 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229914.peg.1523 CDS AP014520.1 1408160 1408984 2 + 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229914.peg.1524 CDS AP014520.1 1409660 1409049 -2 - 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229914.peg.1525 CDS AP014520.1 1412199 1409944 -3 - 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229914.peg.1526 CDS AP014520.1 1412341 1412207 -1 - 135 hypothetical protein - none -
fig|6666666.229914.peg.1527 CDS AP014520.1 1414617 1412791 -3 - 1827 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229914.peg.1528 CDS AP014520.1 1415179 1416066 1 + 888 putative adhesin/invasin - none -
fig|6666666.229914.peg.1529 CDS AP014520.1 1417882 1416170 -1 - 1713 ABC transporter ATP-binding protein - none -
fig|6666666.229914.peg.1530 CDS AP014520.1 1418219 1418884 2 + 666 putative exported protein - none -
fig|6666666.229914.peg.1531 CDS AP014520.1 1418899 1419930 1 + 1032 putative membrane protein - none -
fig|6666666.229914.peg.1532 CDS AP014520.1 1420541 1422583 2 + 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229914.peg.1533 CDS AP014520.1 1422809 1423879 2 + 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229914.peg.1534 CDS AP014520.1 1425451 1424069 -1 - 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229914.peg.1535 CDS AP014520.1 1425540 1425683 3 + 144 hypothetical protein - none -
fig|6666666.229914.peg.1536 CDS AP014520.1 1426051 1425641 -1 - 411 probable membrane protein YPO3565 - none -
fig|6666666.229914.peg.1537 CDS AP014520.1 1427983 1426220 -1 - 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229914.peg.1538 CDS AP014520.1 1429284 1428079 -3 - 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229914.peg.1539 CDS AP014520.1 1429460 1429798 2 + 339 FIG00904093: hypothetical protein - none -
fig|6666666.229914.peg.1540 CDS AP014520.1 1429986 1430975 3 + 990 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229914.peg.1541 CDS AP014520.1 1430927 1431478 2 + 552 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229914.peg.1542 CDS AP014520.1 1432234 1431536 -1 - 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229914.peg.1543 CDS AP014520.1 1432255 1432956 1 + 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229914.peg.1544 CDS AP014520.1 1433142 1434446 3 + 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229914.peg.1545 CDS AP014520.1 1434508 1435731 1 + 1224 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229914.peg.1546 CDS AP014520.1 1436820 1436641 -3 - 180 hypothetical protein - none -
fig|6666666.229914.peg.1547 CDS AP014520.1 1437435 1437569 3 + 135 Mobile element protein - none -
fig|6666666.229914.peg.1548 CDS AP014520.1 1441021 1440209 -1 - 813 hypothetical protein - none -
fig|6666666.229914.peg.1549 CDS AP014520.1 1442179 1441058 -1 - 1122 hypothetical protein - none -
fig|6666666.229914.peg.1550 CDS AP014520.1 1444142 1442385 -2 - 1758 VgrG-3 protein - none -
fig|6666666.229914.peg.1551 CDS AP014520.1 1444309 1444139 -1 - 171 hypothetical protein - none -
fig|6666666.229914.peg.1552 CDS AP014520.1 1446306 1444840 -3 - 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229914.peg.1553 CDS AP014520.1 1447685 1446555 -2 - 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229914.peg.1554 CDS AP014520.1 1449673 1447823 -1 - 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229914.peg.1555 CDS AP014520.1 1450723 1449737 -1 - 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229914.peg.1556 CDS AP014520.1 1450965 1451666 3 + 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229914.peg.1557 CDS AP014520.1 1451680 1452567 1 + 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229914.peg.1558 CDS AP014520.1 1452577 1453446 1 + 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229914.peg.1559 CDS AP014520.1 1453456 1454334 1 + 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229914.peg.1560 CDS AP014520.1 1454489 1455292 2 + 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229914.peg.1561 CDS AP014520.1 1455372 1456493 3 + 1122 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229914.peg.1562 CDS AP014520.1 1456593 1456706 3 + 114 hypothetical protein - none -
fig|6666666.229914.peg.1563 CDS AP014520.1 1457198 1456698 -2 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229914.peg.1564 CDS AP014520.1 1458300 1457239 -3 - 1062 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229914.peg.1565 CDS AP014520.1 1458715 1458293 -1 - 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229914.peg.1566 CDS AP014520.1 1461778 1458725 -1 - 3054 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229914.peg.1567 CDS AP014520.1 1462263 1463303 3 + 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229914.peg.1568 CDS AP014520.1 1463621 1463950 2 + 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229914.peg.1569 CDS AP014520.1 1463925 1464527 3 + 603 putative membrane protein - none -
fig|6666666.229914.peg.1570 CDS AP014520.1 1464528 1464917 3 + 390 COG2363 - none -
fig|6666666.229914.peg.1571 CDS AP014520.1 1464914 1466422 2 + 1509 HrpA-like helicases - none -
fig|6666666.229914.peg.1572 CDS AP014520.1 1466570 1468954 2 + 2385 HrpA-like helicases - none -
fig|6666666.229914.peg.1573 CDS AP014520.1 1470075 1469041 -3 - 1035 ATPase domain protein - none -
fig|6666666.229914.peg.1574 CDS AP014520.1 1470227 1470427 2 + 201 hypothetical protein - none -
fig|6666666.229914.peg.1575 CDS AP014520.1 1471070 1470405 -2 - 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229914.peg.1576 CDS AP014520.1 1471582 1471271 -1 - 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229914.peg.1577 CDS AP014520.1 1472080 1471589 -1 - 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229914.peg.1578 CDS AP014520.1 1472741 1472070 -2 - 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229914.peg.1579 CDS AP014520.1 1473882 1472743 -3 - 1140 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229914.peg.1580 CDS AP014520.1 1475194 1473869 -1 - 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229914.peg.1581 CDS AP014520.1 1476627 1475197 -3 - 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229914.peg.1582 CDS AP014520.1 1477286 1476765 -2 - 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229914.peg.1583 CDS AP014520.1 1479236 1477329 -2 - 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229914.peg.1584 CDS AP014520.1 1481928 1479535 -3 - 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229914.peg.1585 CDS AP014520.1 1482189 1481974 -3 - 216 hypothetical protein - none -
fig|6666666.229914.peg.1586 CDS AP014520.1 1482532 1482191 -1 - 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229914.peg.1587 CDS AP014520.1 1482666 1483466 3 + 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229914.peg.1588 CDS AP014520.1 1483538 1486129 2 + 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229914.peg.1589 CDS AP014520.1 1487488 1486205 -1 - 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229914.peg.1590 CDS AP014520.1 1487616 1488689 3 + 1074 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229914.peg.1592 CDS AP014520.1 1495720 1494902 -1 - 819 Peptide transport system ATP-binding protein SapF Peptide ABC transport system Sap
fig|6666666.229914.peg.1593 CDS AP014520.1 1495882 1495724 -1 - 159 Peptide transport system ATP-binding protein SapD Peptide ABC transport system Sap
fig|6666666.229914.peg.1594 CDS AP014520.1 1496775 1495852 -3 - 924 Peptide transport system ATP-binding protein SapD Peptide ABC transport system Sap
fig|6666666.229914.peg.1595 CDS AP014520.1 1497670 1496783 -1 - 888 Peptide transport system permease protein SapC Peptide ABC transport system Sap
fig|6666666.229914.peg.1596 CDS AP014520.1 1498625 1497660 -2 - 966 Peptide transport system permease protein SapB Peptide ABC transport system Sap
fig|6666666.229914.peg.1597 CDS AP014520.1 1500256 1498625 -1 - 1632 Peptide transport periplasmic protein SapA Peptide ABC transport system Sap
fig|6666666.229914.peg.1598 CDS AP014520.1 1500522 1501937 3 + 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229914.peg.1599 CDS AP014520.1 1501950 1503029 3 + 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229914.peg.1600 CDS AP014520.1 1503113 1504072 2 + 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229914.peg.1601 CDS AP014520.1 1504435 1504127 -1 - 309 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229914.peg.1602 CDS AP014520.1 1504746 1504450 -3 - 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229914.peg.1603 CDS AP014520.1 1505809 1504865 -1 - 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229914.peg.1604 CDS AP014520.1 1507674 1505824 -3 - 1851 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229914.peg.1605 CDS AP014520.1 1509161 1507674 -2 - 1488 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229914.peg.1606 CDS AP014520.1 1509652 1509158 -1 - 495 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229914.peg.1607 CDS AP014520.1 1509627 1509755 3 + 129 hypothetical protein - none -
fig|6666666.229914.peg.1608 CDS AP014520.1 1510050 1509808 -3 - 243 hypothetical protein - none -
fig|6666666.229914.peg.1609 CDS AP014520.1 1511296 1510700 -1 - 597 Mlr4739 protein - none -
fig|6666666.229914.peg.1610 CDS AP014520.1 1512905 1511985 -2 - 921 RfbJ protein - none -
fig|6666666.229914.peg.1611 CDS AP014520.1 1514421 1512913 -3 - 1509 putative integral membrane protein - none -
fig|6666666.229914.peg.1612 CDS AP014520.1 1515025 1514408 -1 - 618 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229914.peg.1613 CDS AP014520.1 1516568 1515054 -2 - 1515 Dca - none -
fig|6666666.229914.peg.1614 CDS AP014520.1 1517899 1517081 -1 - 819 probable phage integrase - none -
fig|6666666.229914.peg.1615 CDS AP014520.1 1519710 1517983 -3 - 1728 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229914.peg.1616 CDS AP014520.1 1520186 1520365 2 + 180 Haemophilus-specific protein, uncharacterized - none -
fig|6666666.229914.peg.1617 CDS AP014520.1 1520679 1520858 3 + 180 hypothetical protein - none -
fig|6666666.229914.peg.1618 CDS AP014520.1 1521428 1521682 2 + 255 hypothetical protein - none -
fig|6666666.229914.peg.1619 CDS AP014520.1 1521685 1522029 1 + 345 Programmed cell death toxin MazF - none -
fig|6666666.229914.peg.1620 CDS AP014520.1 1522594 1523262 1 + 669 Cytolethal distending toxin subunit A Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229914.peg.1621 CDS AP014520.1 1523277 1524128 3 + 852 Cytolethal distending toxin subunit B Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229914.peg.1622 CDS AP014520.1 1524139 1524699 1 + 561 Cytolethal distending toxin subunit C Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229914.peg.1623 CDS AP014520.1 1526067 1525306 -3 - 762 DUF1526 domain-containing protein - none -
fig|6666666.229914.peg.1624 CDS AP014520.1 1526769 1526882 3 + 114 hypothetical protein - none -
fig|6666666.229914.peg.1625 CDS AP014520.1 1527117 1527440 3 + 324 FIG00696053: hypothetical protein - none -
fig|6666666.229914.peg.1626 CDS AP014520.1 1527440 1527679 2 + 240 hypothetical protein - none -
fig|6666666.229914.peg.1627 CDS AP014520.1 1527696 1528103 3 + 408 FIG00696269: hypothetical protein - none -
fig|6666666.229914.peg.1628 CDS AP014520.1 1528122 1528493 3 + 372 FIG00696467: hypothetical protein - none -
fig|6666666.229914.peg.1629 CDS AP014520.1 1528505 1529137 2 + 633 Possible exported protein - none -
fig|6666666.229914.peg.1630 CDS AP014520.1 1529205 1529996 3 + 792 FIG00698030: hypothetical protein - none -
fig|6666666.229914.peg.1631 CDS AP014520.1 1530007 1531395 1 + 1389 putative exported protein - none -
fig|6666666.229914.peg.1632 CDS AP014520.1 1531404 1531811 3 + 408 putative lipoprotein - none -
fig|6666666.229914.peg.1633 CDS AP014520.1 1532649 1532101 -3 - 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229914.peg.1634 CDS AP014520.1 1532721 1533761 3 + 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229914.peg.1635 CDS AP014520.1 1533982 1534239 1 + 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229914.peg.1636 CDS AP014520.1 1534356 1536083 3 + 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229914.peg.1637 CDS AP014520.1 1536144 1536644 3 + 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229914.peg.1638 CDS AP014520.1 1538809 1536770 -1 - 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229914.peg.1639 CDS AP014520.1 1538951 1539316 2 + 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229914.peg.1640 CDS AP014520.1 1539372 1539767 3 + 396 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229914.peg.1641 CDS AP014520.1 1539840 1540910 3 + 1071 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229914.peg.1642 CDS AP014520.1 1541309 1541181 -2 - 129 hypothetical protein - none -
fig|6666666.229914.peg.1643 CDS AP014520.1 1542516 1541344 -3 - 1173 hypothetical protein - none -
fig|6666666.229914.peg.1644 CDS AP014520.1 1543588 1542587 -1 - 1002 hypothetical protein - none -
fig|6666666.229914.peg.1645 CDS AP014520.1 1545007 1543832 -1 - 1176 hypothetical protein - none -
fig|6666666.229914.peg.1646 CDS AP014520.1 1547124 1545007 -3 - 2118 Probable phospholipase protein - none -
fig|6666666.229914.peg.1647 CDS AP014520.1 1549057 1547156 -1 - 1902 VgrG-3 protein - none -
fig|6666666.229914.peg.1648 CDS AP014520.1 1549224 1549054 -3 - 171 hypothetical protein - none -
fig|6666666.229914.peg.1649 CDS AP014520.1 1549997 1549407 -2 - 591 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229914.peg.1650 CDS AP014520.1 1550974 1550000 -1 - 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229914.peg.1651 CDS AP014520.1 1551077 1551643 2 + 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229914.peg.1652 CDS AP014520.1 1551799 1552743 1 + 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229914.peg.1653 CDS AP014520.1 1552961 1553239 2 + 279 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229914.peg.1654 CDS AP014520.1 1554382 1553507 -1 - 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229914.peg.1655 CDS AP014520.1 1554622 1556553 1 + 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229914.peg.1656 CDS AP014520.1 1557123 1556659 -3 - 465 Mobile element protein - none -
fig|6666666.229914.peg.1657 CDS AP014520.1 1557263 1557117 -2 - 147 Mobile element protein - none -
fig|6666666.229914.peg.1658 CDS AP014520.1 1557789 1557424 -3 - 366 hypothetical protein - none -
fig|6666666.229914.peg.1659 CDS AP014520.1 1557937 1557800 -1 - 138 hypothetical protein - none -
fig|6666666.229914.peg.1660 CDS AP014520.1 1558734 1557955 -3 - 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229914.peg.1661 CDS AP014520.1 1559108 1559587 2 + 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229914.peg.1662 CDS AP014520.1 1559794 1559588 -1 - 207 hypothetical protein - none -
fig|6666666.229914.peg.1663 CDS AP014520.1 1560063 1560416 3 + 354 LSU ribosomal protein L20p Ribosome LSU bacterial
fig|6666666.229914.peg.1664 CDS AP014520.1 1561301 1561182 -2 - 120 hypothetical protein - none -
fig|6666666.229914.peg.1665 CDS AP014520.1 1561392 1562345 3 + 954 Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) Lactose and Galactose Uptake and Utilization
fig|6666666.229914.peg.1666 CDS AP014520.1 1562360 1564561 2 + 2202 PTS system, galactitol-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.229914.peg.1667 CDS AP014520.1 1564584 1565564 3 + 981 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) - none -
fig|6666666.229914.peg.1668 CDS AP014520.1 1565631 1566389 3 + 759 Galactitol utilization operon repressor - none -
fig|6666666.229914.peg.1669 CDS AP014520.1 1568359 1566509 -1 - 1851 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229914.peg.1670 CDS AP014520.1 1569334 1568444 -1 - 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229914.peg.1671 CDS AP014520.1 1569590 1569345 -2 - 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229914.peg.1672 CDS AP014520.1 1569816 1570712 3 + 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229914.peg.1673 CDS AP014520.1 1570735 1572081 1 + 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229914.peg.1674 CDS AP014520.1 1572779 1572138 -2 - 642 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229914.peg.1675 CDS AP014520.1 1574298 1572841 -3 - 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.1676 CDS AP014520.1 1575220 1574312 -1 - 909 Putative surface protein - none -
fig|6666666.229914.peg.1677 CDS AP014520.1 1575352 1576029 1 + 678 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229914.peg.1678 CDS AP014520.1 1576074 1576250 3 + 177 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229914.peg.1679 CDS AP014520.1 1576247 1576936 2 + 690 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229914.peg.1680 CDS AP014520.1 1577020 1577343 1 + 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229914.peg.1681 CDS AP014520.1 1577460 1579001 3 + 1542 Esterase/lipase - none -
fig|6666666.229914.peg.1682 CDS AP014520.1 1580629 1579256 -1 - 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229914.peg.1683 CDS AP014520.1 1582640 1580706 -2 - 1935 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) Multidrug Resistance Efflux Pumps
fig|6666666.229914.peg.1684 CDS AP014520.1 1583856 1582660 -3 - 1197 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229914.peg.1685 CDS AP014520.1 1584044 1585735 2 + 1692 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229914.peg.1686 CDS AP014520.1 1585990 1586133 1 + 144 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.1687 CDS AP014520.1 1586143 1586439 1 + 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.1688 CDS AP014520.1 1586552 1586436 -2 - 117 hypothetical protein - none -
fig|6666666.229914.peg.1689 CDS AP014520.1 1586551 1586907 1 + 357 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229914.peg.1690 CDS AP014520.1 1587096 1586896 -3 - 201 Mobile element protein - none -
fig|6666666.229914.peg.1691 CDS AP014520.1 1587223 1587098 -1 - 126 Mobile element protein - none -
fig|6666666.229914.peg.1692 CDS AP014520.1 1587540 1588934 3 + 1395 hypothetical protein - none -
fig|6666666.229914.peg.1693 CDS AP014520.1 1588945 1589097 1 + 153 hypothetical protein - none -
fig|6666666.229914.peg.1694 CDS AP014520.1 1589172 1589576 3 + 405 hypothetical protein - none -
fig|6666666.229914.peg.1695 CDS AP014520.1 1589558 1591849 2 + 2292 hypothetical protein - none -
fig|6666666.229914.peg.1696 CDS AP014520.1 1591869 1593044 3 + 1176 hypothetical protein - none -
fig|6666666.229914.peg.1697 CDS AP014520.1 1593013 1593141 1 + 129 hypothetical protein - none -
fig|6666666.229914.peg.1698 CDS AP014520.1 1593611 1594795 2 + 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229914.peg.1699 CDS AP014520.1 1594810 1595496 1 + 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229914.peg.1700 CDS AP014520.1 1595496 1596746 3 + 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229914.peg.1701 CDS AP014520.1 1596840 1597925 3 + 1086 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229914.peg.1702 CDS AP014520.1 1598067 1597948 -3 - 120 hypothetical protein - none -
fig|6666666.229914.peg.1703 CDS AP014520.1 1598156 1599475 2 + 1320 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229914.peg.1704 CDS AP014520.1 1599499 1600581 1 + 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229914.peg.1705 CDS AP014520.1 1600597 1602246 1 + 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229914.peg.1706 CDS AP014520.1 1603451 1602567 -2 - 885 hypothetical protein - none -
fig|6666666.229914.peg.1707 CDS AP014520.1 1603694 1604167 2 + 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229914.peg.1708 CDS AP014520.1 1604275 1604598 1 + 324 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229914.peg.1709 CDS AP014520.1 1604617 1605600 1 + 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229914.peg.1710 CDS AP014520.1 1605610 1606101 1 + 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229914.peg.1711 CDS AP014520.1 1606110 1606733 3 + 624 L-lysine permease - none -
fig|6666666.229914.peg.1712 CDS AP014520.1 1606755 1607567 3 + 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229914.peg.1713 CDS AP014520.1 1607905 1607657 -1 - 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229914.peg.1714 CDS AP014520.1 1608243 1607974 -3 - 270 hypothetical protein - none -
fig|6666666.229914.peg.1715 CDS AP014520.1 1609395 1608265 -3 - 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229914.peg.1716 CDS AP014520.1 1609982 1609416 -2 - 567 hypothetical protein - none -
fig|6666666.229914.peg.1717 CDS AP014520.1 1611432 1610686 -3 - 747 hypothetical protein - none -
fig|6666666.229914.peg.1718 CDS AP014520.1 1613737 1611467 -1 - 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229914.peg.1719 CDS AP014520.1 1615512 1614040 -3 - 1473 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System
fig|6666666.229914.peg.1720 CDS AP014520.1 1615614 1615775 3 + 162 hypothetical protein - none -
fig|6666666.229914.peg.1721 CDS AP014520.1 1615786 1616814 1 + 1029 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229914.peg.1722 CDS AP014520.1 1616866 1618896 1 + 2031 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229914.peg.1723 CDS AP014520.1 1618880 1619920 2 + 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229914.peg.1724 CDS AP014520.1 1622029 1619978 -1 - 2052 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229914.peg.1725 CDS AP014520.1 1623013 1622123 -1 - 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229914.peg.1726 CDS AP014520.1 1624573 1623035 -1 - 1539 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229914.peg.1727 CDS AP014520.1 1624728 1624597 -3 - 132 hypothetical protein - none -
fig|6666666.229914.peg.1728 CDS AP014520.1 1625887 1624697 -1 - 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229914.peg.1729 CDS AP014520.1 1626343 1627461 1 + 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229914.peg.1730 CDS AP014520.1 1627538 1628821 2 + 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229914.peg.1731 CDS AP014520.1 1628907 1629809 3 + 903 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229914.peg.1732 CDS AP014520.1 1630029 1629823 -3 - 207 hypothetical protein - none -
fig|6666666.229914.peg.1733 CDS AP014520.1 1630980 1630162 -3 - 819 Aldose 1-epimerase - none -
fig|6666666.229914.peg.1734 CDS AP014520.1 1631056 1632993 1 + 1938 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229914.peg.1735 CDS AP014520.1 1632996 1633718 3 + 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229914.peg.1736 CDS AP014520.1 1633750 1634307 1 + 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229914.peg.1737 CDS AP014520.1 1634350 1634955 1 + 606 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229914.peg.1738 CDS AP014520.1 1634956 1636038 1 + 1083 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229914.peg.1739 CDS AP014520.1 1636105 1637262 1 + 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229914.peg.1740 CDS AP014520.1 1638732 1637350 -3 - 1383 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229914.peg.1741 CDS AP014520.1 1639072 1639281 1 + 210 hypothetical protein - none -
fig|6666666.229914.peg.1742 CDS AP014520.1 1639533 1639760 3 + 228 hypothetical protein - none -
fig|6666666.229914.peg.1743 CDS AP014520.1 1640533 1641342 1 + 810 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229914.peg.1744 CDS AP014520.1 1641875 1642795 2 + 921 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229914.peg.1745 CDS AP014520.1 1642818 1642931 3 + 114 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229914.peg.1746 CDS AP014520.1 1642955 1643269 2 + 315 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229914.peg.1747 CDS AP014520.1 1643278 1643889 1 + 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229914.peg.1748 CDS AP014520.1 1643889 1644452 3 + 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229914.peg.1749 CDS AP014520.1 1645445 1644510 -2 - 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229914.peg.1750 CDS AP014520.1 1645559 1646989 2 + 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229914.peg.1751 CDS AP014520.1 1647411 1647031 -3 - 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229914.peg.1752 CDS AP014520.1 1648607 1647408 -2 - 1200 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Archaea
fig|6666666.229914.peg.1753 CDS AP014520.1 1649113 1648613 -1 - 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229914.peg.1754 CDS AP014520.1 1650095 1649130 -2 - 966 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229914.peg.1755 CDS AP014520.1 1650236 1650652 2 + 417 putative membrane protein - none -
fig|6666666.229914.peg.1756 CDS AP014520.1 1652754 1650742 -3 - 2013 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229914.peg.1757 CDS AP014520.1 1653253 1652756 -1 - 498 FIG00697418: hypothetical protein - none -
fig|6666666.229914.peg.1758 CDS AP014520.1 1653472 1654464 1 + 993 ABC transporter, solute-binding protein - none -
fig|6666666.229914.peg.1759 CDS AP014520.1 1654464 1655477 3 + 1014 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229914.peg.1760 CDS AP014520.1 1655474 1656223 2 + 750 ABC transporter ATP-binding protein - none -
fig|6666666.229914.peg.1761 CDS AP014520.1 1656318 1656620 3 + 303 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229914.peg.1762 CDS AP014520.1 1656617 1656796 2 + 180 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229914.peg.1763 CDS AP014520.1 1656790 1657917 1 + 1128 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229914.peg.1764 CDS AP014520.1 1658062 1658712 1 + 651 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229914.peg.1765 CDS AP014520.1 1659040 1658831 -1 - 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229914.peg.1766 CDS AP014520.1 1660157 1659123 -2 - 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229914.peg.1767 CDS AP014520.1 1660964 1660170 -2 - 795 Glutathione synthetase (EC 6.3.2.3) Cluster containing Glutathione synthetase;
Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229914.peg.1768 CDS AP014520.1 1662028 1660964 -1 - 1065 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229914.peg.1769 CDS AP014520.1 1662858 1662163 -3 - 696 hypothetical protein - none -
fig|6666666.229914.peg.1770 CDS AP014520.1 1663058 1663321 2 + 264 Phage tail fibers Phage tail fiber proteins
fig|6666666.229914.peg.1771 CDS AP014520.1 1663358 1664122 2 + 765 Mobile element protein - none -
fig|6666666.229914.peg.1772 CDS AP014520.1 1666146 1665178 -3 - 969 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229914.peg.1773 CDS AP014520.1 1666504 1667517 1 + 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229914.peg.1774 CDS AP014520.1 1667570 1668052 2 + 483 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229914.peg.1775 CDS AP014520.1 1668052 1668297 1 + 246 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229914.peg.1776 CDS AP014520.1 1668298 1668753 1 + 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229914.peg.1777 CDS AP014520.1 1668953 1669594 2 + 642 Stringent starvation protein A Carbon Starvation
fig|6666666.229914.peg.1778 CDS AP014520.1 1669606 1670067 1 + 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229914.peg.1779 CDS AP014520.1 1671633 1670230 -3 - 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn;
tRNA modification Archaea
fig|6666666.229914.peg.1780 CDS AP014520.1 1671829 1673058 1 + 1230 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229914.peg.1781 CDS AP014520.1 1673135 1673863 2 + 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229914.peg.1782 CDS AP014520.1 1675525 1673951 -1 - 1575 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229914.peg.1783 CDS AP014520.1 1676539 1675574 -1 - 966 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229914.peg.1784 CDS AP014520.1 1676783 1678300 2 + 1518 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229914.peg.1785 CDS AP014520.1 1678309 1679340 1 + 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229914.peg.1786 CDS AP014520.1 1679354 1680358 2 + 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229914.peg.1787 CDS AP014520.1 1680383 1681480 2 + 1098 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229914.peg.1788 CDS AP014520.1 1681499 1682377 2 + 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229914.peg.1789 CDS AP014520.1 1682410 1682712 1 + 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229914.peg.1790 CDS AP014520.1 1684222 1682816 -1 - 1407 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229914.peg.1791 CDS AP014520.1 1685497 1684508 -1 - 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229914.peg.1792 CDS AP014520.1 1687313 1685628 -2 - 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229914.peg.1793 CDS AP014520.1 1688395 1687589 -1 - 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229914.peg.1794 CDS AP014520.1 1689591 1688398 -3 - 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229914.peg.1795 CDS AP014520.1 1690338 1689601 -3 - 738 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229914.peg.1796 CDS AP014520.1 1690326 1690538 3 + 213 hypothetical protein - none -
fig|6666666.229914.peg.1797 CDS AP014520.1 1691044 1693488 1 + 2445 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229914.peg.1798 CDS AP014520.1 1693880 1693683 -2 - 198 hypothetical protein - none -
fig|6666666.229914.peg.1799 CDS AP014520.1 1695196 1693892 -1 - 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229914.peg.1800 CDS AP014520.1 1697003 1695207 -2 - 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229914.peg.1801 CDS AP014520.1 1697285 1697019 -2 - 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229914.peg.1802 CDS AP014520.1 1697951 1698070 2 + 120 hypothetical protein - none -
fig|6666666.229914.peg.1803 CDS AP014520.1 1698588 1698313 -3 - 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229914.peg.1804 CDS AP014520.1 1698905 1698618 -2 - 288 Hydrogenase-2 operon protein hybE - none -
fig|6666666.229914.peg.1805 CDS AP014520.1 1700246 1699044 -2 - 1203 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229914.peg.1806 CDS AP014520.1 1700431 1700243 -1 - 189 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229914.peg.1807 CDS AP014520.1 1700760 1700482 -3 - 279 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.1808 CDS AP014520.1 1701048 1700770 -3 - 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.1809 CDS AP014520.1 1702144 1701143 -1 - 1002 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229914.peg.1810 CDS AP014520.1 1702548 1702156 -3 - 393 putative - none -
fig|6666666.229914.peg.1811 CDS AP014520.1 1703212 1702622 -1 - 591 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229914.peg.1812 CDS AP014520.1 1704770 1703223 -2 - 1548 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229914.peg.1813 CDS AP014520.1 1705490 1704936 -2 - 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) KDO2-Lipid A biosynthesis
fig|6666666.229914.peg.1814 CDS AP014520.1 1706425 1705490 -1 - 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) KDO2-Lipid A biosynthesis
fig|6666666.229914.peg.1815 CDS AP014520.1 1707071 1706922 -2 - 150 hypothetical protein - none -
fig|6666666.229914.peg.1816 CDS AP014520.1 1707108 1707983 3 + 876 Probable protease htpX homolog - none -
fig|6666666.229914.peg.1817 CDS AP014520.1 1708039 1708224 1 + 186 hypothetical protein - none -
fig|6666666.229914.peg.1818 CDS AP014520.1 1708322 1709311 2 + 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229914.peg.1819 CDS AP014520.1 1709331 1711721 3 + 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229914.peg.1820 CDS AP014520.1 1711725 1712021 3 + 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229914.peg.1821 CDS AP014520.1 1712073 1712561 3 + 489 Probable lipoprotein nlpC precursor - none -
fig|6666666.229914.peg.1822 CDS AP014520.1 1713081 1712728 -3 - 354 hypothetical protein - none -
fig|6666666.229914.peg.1823 CDS AP014520.1 1713238 1713122 -1 - 117 hypothetical protein - none -
fig|6666666.229914.peg.1824 CDS AP014520.1 1714666 1713248 -1 - 1419 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229914.peg.1825 CDS AP014520.1 1715812 1714733 -1 - 1080 ABC-type multidrug transport system, permease component - none -
fig|6666666.229914.peg.1826 CDS AP014520.1 1718558 1715814 -2 - 2745 ABC-type multidrug transport system, permease component - none -
fig|6666666.229914.peg.1827 CDS AP014520.1 1719541 1718561 -1 - 981 HlyD family secretion protein - none -
fig|6666666.229914.peg.1828 CDS AP014520.1 1719689 1720252 2 + 564 Transcriptional regulator, TetR family - none -
fig|6666666.229914.peg.1829 CDS AP014520.1 1721493 1720303 -3 - 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229914.peg.1830 CDS AP014520.1 1721915 1724524 2 + 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229914.peg.1831 CDS AP014520.1 1724597 1725616 2 + 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229914.peg.1832 CDS AP014520.1 1725630 1726466 3 + 837 COG0613, Predicted metal-dependent phosphoesterases (PHP family) YrdC-YciO-Sua5 protein family;
tRNA modification Bacteria
fig|6666666.229914.peg.1833 CDS AP014520.1 1726704 1729145 3 + 2442 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229914.peg.1834 CDS AP014520.1 1730261 1729425 -2 - 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229914.peg.1835 CDS AP014520.1 1731320 1730388 -2 - 933 Universal stress protein E Universal stress protein family
fig|6666666.229914.peg.1836 CDS AP014520.1 1732104 1731439 -3 - 666 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229914.peg.1837 CDS AP014520.1 1732320 1732526 3 + 207 hypothetical protein - none -
fig|6666666.229914.peg.1838 CDS AP014520.1 1733047 1732550 -1 - 498 Ferritin-like protein 2 - none -
fig|6666666.229914.peg.1839 CDS AP014520.1 1733548 1733063 -1 - 486 Ferritin-like protein 2 - none -
fig|6666666.229914.peg.1840 CDS AP014520.1 1735704 1734442 -3 - 1263 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229914.peg.1841 CDS AP014520.1 1736752 1735880 -1 - 873 Integral membrane protein - none -
fig|6666666.229914.peg.1842 CDS AP014520.1 1741319 1736829 -2 - 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229914.peg.1843 CDS AP014520.1 1742059 1741319 -1 - 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229914.peg.1844 CDS AP014520.1 1745541 1742080 -3 - 3462 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229914.peg.1845 CDS AP014520.1 1747041 1745713 -3 - 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229914.peg.1846 CDS AP014520.1 1748051 1747221 -2 - 831 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229914.peg.1847 CDS AP014520.1 1748876 1748274 -2 - 603 lipoprotein HlpB - none -
fig|6666666.229914.peg.1848 CDS AP014520.1 1749312 1749025 -3 - 288 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.229914.peg.1849 CDS AP014520.1 1749526 1750131 1 + 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229914.peg.1850 CDS AP014520.1 1752715 1750250 -1 - 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229914.peg.1851 CDS AP014520.1 1754277 1752838 -3 - 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229914.peg.1852 CDS AP014520.1 1755789 1754479 -3 - 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229914.peg.1853 CDS AP014520.1 1757825 1755816 -2 - 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229914.peg.1854 CDS AP014520.1 1760017 1757822 -1 - 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229914.peg.1855 CDS AP014520.1 1760574 1760005 -3 - 570 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229914.peg.1856 CDS AP014520.1 1762325 1762131 -2 - 195 hypothetical protein - none -
fig|6666666.229914.peg.1857 CDS AP014520.1 1763357 1762362 -2 - 996 hypothetical protein - none -
fig|6666666.229914.peg.1858 CDS AP014520.1 1765569 1763623 -3 - 1947 ABC transporter ATP-binding protein - none -
fig|6666666.229914.peg.1859 CDS AP014520.1 1765563 1765682 3 + 120 hypothetical protein - none -
fig|6666666.229914.peg.1860 CDS AP014520.1 1765722 1766024 3 + 303 FIG022160: hypothetical toxin - none -
fig|6666666.229914.peg.1861 CDS AP014520.1 1766026 1766319 1 + 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229914.peg.1862 CDS AP014520.1 1767708 1766356 -3 - 1353 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.229914.peg.1863 CDS AP014520.1 1768762 1767710 -1 - 1053 LrgA-associated membrane protein LrgB - none -
fig|6666666.229914.peg.1864 CDS AP014520.1 1769298 1770389 3 + 1092 Integrase - none -
fig|6666666.229914.peg.1865 CDS AP014520.1 1770677 1770498 -2 - 180 FIG050068: DNA-binding protein - none -
fig|6666666.229914.peg.1866 CDS AP014520.1 1771713 1770700 -3 - 1014 Mobile element protein - none -
fig|6666666.229914.peg.1867 CDS AP014520.1 1772037 1771750 -3 - 288 hypothetical protein - none -
fig|6666666.229914.peg.1868 CDS AP014520.1 1772265 1773032 3 + 768 Mobile element protein - none -
fig|6666666.229914.peg.1869 CDS AP014520.1 1774051 1773098 -1 - 954 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229914.peg.1870 CDS AP014520.1 1774235 1774939 2 + 705 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229914.peg.1871 CDS AP014520.1 1776479 1775022 -2 - 1458 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis;
tRNA modification Archaea;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA modification Bacteria
fig|6666666.229914.peg.1872 CDS AP014520.1 1776823 1777884 1 + 1062 Cytochrome c-type protein TorY - none -
fig|6666666.229914.peg.1873 CDS AP014520.1 1777945 1780425 1 + 2481 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229914.peg.1874 CDS AP014520.1 1781273 1780494 -2 - 780 Protein of unknown function DUF419 - none -
fig|6666666.229914.peg.1875 CDS AP014520.1 1781503 1782960 1 + 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229914.peg.1876 CDS AP014520.1 1783175 1783429 2 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.1877 CDS AP014520.1 1783426 1783578 1 + 153 StbE replicon stabilization toxin - none -
fig|6666666.229914.peg.1878 CDS AP014520.1 1783562 1783708 2 + 147 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.1879 CDS AP014520.1 1784506 1783721 -1 - 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229914.peg.1880 CDS AP014520.1 1785059 1784667 -2 - 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229914.peg.1881 CDS AP014520.1 1785504 1785076 -3 - 429 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.229914.peg.1882 CDS AP014520.1 1786342 1785746 -1 - 597 hypothetical protein - none -
fig|6666666.229914.peg.1883 CDS AP014520.1 1788334 1786355 -1 - 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229914.peg.1884 CDS AP014520.1 1791999 1788334 -3 - 3666 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229914.peg.1885 CDS AP014520.1 1792426 1792070 -1 - 357 DsrE-related protein - none -
fig|6666666.229914.peg.1886 CDS AP014520.1 1793382 1792852 -3 - 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229914.peg.1887 CDS AP014520.1 1795309 1793525 -1 - 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229914.peg.1888 CDS AP014520.1 1795456 1795902 1 + 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229914.peg.1889 CDS AP014520.1 1796178 1795969 -3 - 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229914.peg.1890 CDS AP014520.1 1796532 1796362 -3 - 171 unknown - none -
fig|6666666.229914.peg.1891 CDS AP014520.1 1797296 1796583 -2 - 714 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229914.peg.1892 CDS AP014520.1 1797607 1797293 -1 - 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229914.peg.1893 CDS AP014520.1 1797703 1798497 1 + 795 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229914.peg.1894 CDS AP014520.1 1798506 1799345 3 + 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229914.peg.1895 CDS AP014520.1 1800647 1799397 -2 - 1251 Phosphoglycerate transport system transcriptional regulatory protein PgtA Phosphoglycerate transport system
fig|6666666.229914.peg.1896 CDS AP014520.1 1801236 1800640 -3 - 597 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229914.peg.1897 CDS AP014520.1 1802533 1801193 -1 - 1341 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229914.peg.1898 CDS AP014520.1 1802679 1802530 -3 - 150 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229914.peg.1899 CDS AP014520.1 1802710 1803084 1 + 375 hypothetical protein - none -
fig|6666666.229914.peg.1900 CDS AP014520.1 1803237 1803383 3 + 147 Mobile element protein - none -
fig|6666666.229914.peg.1901 CDS AP014520.1 1803387 1803842 3 + 456 Mobile element protein - none -
fig|6666666.229914.peg.1902 CDS AP014520.1 1805036 1803915 -2 - 1122 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229914.peg.1903 CDS AP014520.1 1805410 1806105 1 + 696 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229914.peg.1904 CDS AP014520.1 1806126 1806407 3 + 282 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229914.peg.1905 CDS AP014520.1 1806429 1807508 3 + 1080 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229914.peg.1906 CDS AP014520.1 1807511 1809205 2 + 1695 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229914.peg.1907 CDS AP014520.1 1809227 1810285 2 + 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229914.peg.1908 CDS AP014520.1 1810848 1810411 -3 - 438 Putative transporting ATPase - none -
fig|6666666.229914.peg.1909 CDS AP014520.1 1812996 1811044 -3 - 1953 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229914.peg.1910 CDS AP014520.1 1813744 1813103 -1 - 642 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229914.peg.1911 CDS AP014520.1 1814735 1813866 -2 - 870 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229914.peg.1912 CDS AP014520.1 1815168 1814770 -3 - 399 DNA-binding protein H-NS - none -
fig|6666666.229914.peg.1913 CDS AP014520.1 1815609 1817141 3 + 1533 Na+/H+ antiporter - none -
fig|6666666.229914.peg.1914 CDS AP014520.1 1817985 1817275 -3 - 711 hypothetical protein - none -
fig|6666666.229914.peg.1915 CDS AP014520.1 1818668 1817991 -2 - 678 FIG00904286: hypothetical protein - none -
fig|6666666.229914.peg.1916 CDS AP014520.1 1818809 1819162 2 + 354 Putative translation initiation inhibitor, yjgF family - none -
fig|6666666.229914.peg.1917 CDS AP014520.1 1819914 1819204 -3 - 711 hypothetical protein - none -
fig|6666666.229914.peg.1918 CDS AP014520.1 1820649 1820068 -3 - 582 hypothetical protein - none -
fig|6666666.229914.peg.1919 CDS AP014520.1 1821703 1820750 -1 - 954 Glycosyltransferase - none -
fig|6666666.229914.peg.1920 CDS AP014520.1 1822737 1821847 -3 - 891 hypothetical protein - none -
fig|6666666.229914.peg.1921 CDS AP014520.1 1824785 1822740 -2 - 2046 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229914.peg.1922 CDS AP014520.1 1825429 1824818 -1 - 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229914.peg.1923 CDS AP014520.1 1826407 1825451 -1 - 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229914.peg.1924 CDS AP014520.1 1827290 1826523 -2 - 768 Putative membrane protein YfcA - none -
fig|6666666.229914.peg.1925 CDS AP014520.1 1828166 1827294 -2 - 873 Murein endopeptidase - none -
fig|6666666.229914.peg.1926 CDS AP014520.1 1829260 1828187 -1 - 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229914.peg.1927 CDS AP014520.1 1832605 1829282 -1 - 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229914.peg.1928 CDS AP014520.1 1834029 1832614 -3 - 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229914.peg.1929 CDS AP014520.1 1834652 1834035 -2 - 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229914.peg.1930 CDS AP014520.1 1834739 1835539 2 + 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229914.peg.1931 CDS AP014520.1 1835959 1836483 1 + 525 Flavodoxin 1 Flavodoxin
fig|6666666.229914.peg.1932 CDS AP014520.1 1836502 1836942 1 + 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229914.peg.1933 CDS AP014520.1 1837110 1838057 3 + 948 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229914.peg.1934 CDS AP014520.1 1838051 1839772 2 + 1722 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229914.peg.1935 CDS AP014520.1 1839840 1840190 3 + 351 FIG00782386: hypothetical protein - none -
fig|6666666.229914.peg.1936 CDS AP014520.1 1840541 1840224 -2 - 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229914.peg.1937 CDS AP014520.1 1841239 1840547 -1 - 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229914.peg.1938 CDS AP014520.1 1842459 1841269 -3 - 1191 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229914.peg.1939 CDS AP014520.1 1842755 1842459 -2 - 297 Inner membrane protein yciS - none -
fig|6666666.229914.peg.1940 CDS AP014520.1 1843141 1842854 -1 - 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229914.peg.1941 CDS AP014520.1 1844849 1843203 -2 - 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229914.peg.1942 CDS AP014520.1 1845624 1844947 -3 - 678 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229914.peg.1943 CDS AP014520.1 1846510 1845617 -1 - 894 Membrane protein LAPB - none -
fig|6666666.229914.peg.1944 CDS AP014520.1 1846895 1848496 2 + 1602 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229914.peg.1945 CDS AP014520.1 1849120 1848707 -1 - 414 transcriptional regulatory protein - none -
fig|6666666.229914.peg.1946 CDS AP014520.1 1849690 1849866 1 + 177 possible DNA-binding protein - none -
fig|6666666.229914.peg.1947 CDS AP014520.1 1849881 1851902 3 + 2022 transposase - none -
fig|6666666.229914.peg.1948 CDS AP014520.1 1851938 1852762 2 + 825 Mu phage DNA transposition protein B - none -
fig|6666666.229914.peg.1949 CDS AP014520.1 1852855 1853085 1 + 231 hypothetical protein - none -
fig|6666666.229914.peg.1950 CDS AP014520.1 1853101 1853724 1 + 624 hypothetical protein - none -
fig|6666666.229914.peg.1951 CDS AP014520.1 1853939 1854199 2 + 261 hypothetical protein - none -
fig|6666666.229914.peg.1952 CDS AP014520.1 1854291 1854458 3 + 168 hypothetical protein - none -
fig|6666666.229914.peg.1953 CDS AP014520.1 1854455 1854640 2 + 186 hypothetical protein - none -
fig|6666666.229914.peg.1954 CDS AP014520.1 1854637 1854957 1 + 321 hypothetical protein - none -
fig|6666666.229914.peg.1955 CDS AP014520.1 1854997 1855182 1 + 186 hypothetical protein - none -
fig|6666666.229914.peg.1956 CDS AP014520.1 1855186 1855446 1 + 261 hypothetical protein - none -
fig|6666666.229914.peg.1957 CDS AP014520.1 1856118 1856005 -3 - 114 hypothetical protein - none -
fig|6666666.229914.peg.1958 CDS AP014520.1 1856125 1856484 1 + 360 COG1896: Predicted hydrolases of HD superfamily - none -
fig|6666666.229914.peg.1959 CDS AP014520.1 1857200 1857742 2 + 543 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229914.peg.1960 CDS AP014520.1 1857720 1858181 3 + 462 hypothetical protein - none -
fig|6666666.229914.peg.1961 CDS AP014520.1 1858178 1858597 2 + 420 Mu-like phage C protein, possible positive regulator of late transcription - none -
fig|6666666.229914.peg.1962 CDS AP014520.1 1858680 1859225 3 + 546 Negative regulator of beta-lactamase expression Beta-lactamase
fig|6666666.229914.peg.1963 CDS AP014520.1 1859528 1859761 2 + 234 FIG00696851: hypothetical protein - none -
fig|6666666.229914.peg.1964 CDS AP014520.1 1859754 1860164 3 + 411 hypothetical protein - none -
fig|6666666.229914.peg.1965 CDS AP014520.1 1860157 1860375 1 + 219 hypothetical protein - none -
fig|6666666.229914.peg.1966 CDS AP014520.1 1860372 1860707 3 + 336 Mu-like phage gp25 - none -
fig|6666666.229914.peg.1967 CDS AP014520.1 1860711 1861010 3 + 300 FIG00638990: hypothetical protein - none -
fig|6666666.229914.peg.1968 CDS AP014520.1 1861033 1861608 1 + 576 Phage terminase small subunit Phage packaging machinery
fig|6666666.229914.peg.1969 CDS AP014520.1 1861608 1863212 3 + 1605 FIG00698398: hypothetical protein - none -
fig|6666666.229914.peg.1970 CDS AP014520.1 1863222 1864796 3 + 1575 Mu-like prophage FluMu protein gp29 - none -
fig|6666666.229914.peg.1971 CDS AP014520.1 1864804 1866108 1 + 1305 Phage (Mu-like) virion morphogenesis protein - none -
fig|6666666.229914.peg.1972 CDS AP014520.1 1866243 1866686 3 + 444 G protein - none -
fig|6666666.229914.peg.1973 CDS AP014520.1 1866885 1867964 3 + 1080 Mu-like prophage FluMu I protein - none -
fig|6666666.229914.peg.1974 CDS AP014520.1 1867957 1868883 1 + 927 Phage major capsid protein Phage capsid proteins
fig|6666666.229914.peg.1975 CDS AP014520.1 1868960 1869391 2 + 432 hypothetical protein - none -
fig|6666666.229914.peg.1976 CDS AP014520.1 1869391 1869798 1 + 408 Mu-like prophage protein GP36 - none -
fig|6666666.229914.peg.1977 CDS AP014520.1 1869798 1870232 3 + 435 Mu-like prophage FluMu protein gp37 - none -
fig|6666666.229914.peg.1978 CDS AP014520.1 1870234 1870425 1 + 192 hypothetical protein - none -
fig|6666666.229914.peg.1979 CDS AP014520.1 1870412 1871158 2 + 747 Phage protein - none -
fig|6666666.229914.peg.1980 CDS AP014520.1 1871244 1871669 3 + 426 Phage protein - none -
fig|6666666.229914.peg.1981 CDS AP014520.1 1871672 1871857 2 + 186 hypothetical protein - none -
fig|6666666.229914.peg.1982 CDS AP014520.1 1872043 1871873 -1 - 171 hypothetical protein - none -
fig|6666666.229914.peg.1983 CDS AP014520.1 1872102 1875386 3 + 3285 Phage tail length tape-measure protein Phage tail proteins;
Phage tail proteins 2
fig|6666666.229914.peg.1984 CDS AP014520.1 1875394 1876350 1 + 957 Phage protein - none -
fig|6666666.229914.peg.1985 CDS AP014520.1 1876350 1877333 3 + 984 hypothetical protein - none -
fig|6666666.229914.peg.1986 CDS AP014520.1 1877337 1879016 3 + 1680 FIG00698772: hypothetical protein - none -
fig|6666666.229914.peg.1987 CDS AP014520.1 1879080 1879889 3 + 810 Phage FAD/FMN-containing dehydrogenase - none -
fig|6666666.229914.peg.1988 CDS AP014520.1 1879901 1880146 2 + 246 hypothetical protein - none -
fig|6666666.229914.peg.1989 CDS AP014520.1 1880171 1880356 2 + 186 hypothetical protein - none -
fig|6666666.229914.peg.1990 CDS AP014520.1 1880356 1883139 1 + 2784 FIG00696772: hypothetical protein - none -
fig|6666666.229914.peg.1991 CDS AP014520.1 1883245 1884075 1 + 831 FIG00697497: hypothetical protein - none -
fig|6666666.229914.peg.1992 CDS AP014520.1 1884372 1884506 3 + 135 hypothetical protein - none -
fig|6666666.229914.peg.1993 CDS AP014520.1 1884524 1885213 2 + 690 hypothetical protein - none -
fig|6666666.229914.peg.1994 CDS AP014520.1 1885445 1885714 2 + 270 hypothetical protein - none -
fig|6666666.229914.peg.1995 CDS AP014520.1 1885995 1886252 3 + 258 hypothetical protein - none -
fig|6666666.229914.peg.1996 CDS AP014520.1 1886774 1887391 2 + 618 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229914.peg.1997 CDS AP014520.1 1887469 1890243 1 + 2775 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229914.peg.1998 CDS AP014520.1 1890640 1890308 -1 - 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229914.peg.1999 CDS AP014520.1 1891369 1890641 -1 - 729 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229914.peg.2000 CDS AP014520.1 1892306 1891374 -2 - 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229914.peg.2001 CDS AP014520.1 1892597 1894873 2 + 2277 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229914.peg.2002 CDS AP014520.1 1895730 1895437 -3 - 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229914.peg.2003 CDS AP014520.1 1896747 1895734 -3 - 1014 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229914.peg.2004 CDS AP014520.1 1898639 1896795 -2 - 1845 hypothetical protein - none -
fig|6666666.229914.peg.2005 CDS AP014520.1 1899349 1898702 -1 - 648 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229914.peg.2006 CDS AP014520.1 1900418 1899525 -2 - 894 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229914.peg.2007 CDS AP014520.1 1902473 1900440 -2 - 2034 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229914.peg.2008 CDS AP014520.1 1903249 1902470 -1 - 780 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229914.peg.2009 CDS AP014520.1 1905723 1903258 -3 - 2466 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229914.peg.2010 CDS AP014520.1 1905923 1908856 2 + 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229914.peg.2011 CDS AP014520.1 1909191 1908892 -3 - 300 Putative transcriptional regulator - none -
fig|6666666.229914.peg.2012 CDS AP014520.1 1909538 1909188 -2 - 351 YPPCP.09C homologue - none -
fig|6666666.229914.peg.2013 CDS AP014520.1 1911308 1909725 -2 - 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229914.peg.2014 CDS AP014520.1 1911378 1911494 3 + 117 hypothetical protein - none -
fig|6666666.229914.peg.2015 CDS AP014520.1 1911665 1912492 2 + 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229914.peg.2016 CDS AP014520.1 1912580 1913917 2 + 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229914.peg.2017 CDS AP014520.1 1914108 1914353 3 + 246 FIG00696862: hypothetical protein - none -
fig|6666666.229914.peg.2018 CDS AP014520.1 1914586 1916355 1 + 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229914.peg.2019 CDS AP014520.1 1917422 1916481 -2 - 942 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229914.peg.2020 CDS AP014520.1 1917875 1917447 -2 - 429 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229914.peg.2021 CDS AP014520.1 1918290 1917844 -3 - 447 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229914.peg.2022 CDS AP014520.1 1918504 1918259 -1 - 246 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229914.peg.2023 CDS AP014520.1 1919058 1918642 -3 - 417 Protein ygiW precursor - none -
fig|6666666.229914.peg.2024 CDS AP014520.1 1919430 1920347 3 + 918 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229914.peg.2025 CDS AP014520.1 1922518 1920542 -1 - 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229914.peg.2026 CDS AP014520.1 1922748 1923647 3 + 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229914.peg.2027 CDS AP014520.1 1923707 1924672 2 + 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229914.peg.2028 CDS AP014520.1 1924680 1925603 3 + 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229914.peg.2029 CDS AP014520.1 1925615 1926373 2 + 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229914.peg.2030 CDS AP014520.1 1926377 1926514 2 + 138 hypothetical protein - none -
fig|6666666.229914.peg.2031 CDS AP014520.1 1927910 1926480 -2 - 1431 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229914.peg.2032 CDS AP014520.1 1928010 1927897 -3 - 114 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229914.peg.2033 CDS AP014520.1 1928198 1928971 2 + 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229914.peg.2034 CDS AP014520.1 1928983 1929804 1 + 822 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229914.peg.2035 CDS AP014520.1 1931534 1930161 -2 - 1374 sodium-dependent transporter - none -
fig|6666666.229914.peg.2036 CDS AP014520.1 1932101 1931559 -2 - 543 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229914.peg.2037 CDS AP014520.1 1933124 1932339 -2 - 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.2038 CDS AP014520.1 1933736 1933176 -2 - 561 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.2039 CDS AP014520.1 1934822 1933743 -2 - 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.2040 CDS AP014520.1 1937061 1934833 -3 - 2229 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.2041 CDS AP014520.1 1937652 1937062 -3 - 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.2042 CDS AP014520.1 1938233 1937652 -2 - 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229914.peg.2043 CDS AP014520.1 1939311 1938424 -3 - 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229914.peg.2044 CDS AP014520.1 1939802 1939335 -2 - 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229914.peg.2045 CDS AP014520.1 1939827 1939949 3 + 123 hypothetical protein - none -
fig|6666666.229914.peg.2046 CDS AP014520.1 1939987 1941000 1 + 1014 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229914.peg.2047 CDS AP014520.1 1941896 1941156 -2 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229914.peg.2048 CDS AP014520.1 1943277 1942258 -3 - 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229914.peg.2049 CDS AP014520.1 1943853 1943701 -3 - 153 hypothetical protein - none -
fig|6666666.229914.peg.2050 CDS AP014520.1 1943738 1943881 2 + 144 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229914.peg.2051 CDS AP014520.1 1943884 1944642 1 + 759 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229914.peg.2052 CDS AP014520.1 1944662 1945723 2 + 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229914.peg.2053 CDS AP014520.1 1945840 1946292 1 + 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229914.peg.2054 CDS AP014520.1 1946292 1947416 3 + 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229914.peg.2055 CDS AP014520.1 1947425 1948453 2 + 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229914.peg.2056 CDS AP014520.1 1948462 1949058 1 + 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229914.peg.2057 CDS AP014520.1 1950522 1949125 -3 - 1398 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229914.peg.2058 CDS AP014520.1 1951468 1950689 -1 - 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229914.peg.2059 CDS AP014520.1 1951696 1952460 1 + 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229914.peg.2060 CDS AP014520.1 1952539 1953267 1 + 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229914.peg.2061 CDS AP014520.1 1953254 1954315 2 + 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229914.peg.2062 CDS AP014520.1 1955950 1954460 -1 - 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229914.peg.2063 CDS AP014520.1 1956087 1957205 3 + 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229914.peg.2064 CDS AP014520.1 1957210 1958277 1 + 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229914.peg.2065 CDS AP014520.1 1958452 1959336 1 + 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229914.peg.2066 CDS AP014520.1 1959486 1960301 3 + 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229914.peg.2067 CDS AP014520.1 1964110 1962905 -1 - 1206 hypothetical protein - none -
fig|6666666.229914.peg.2068 CDS AP014520.1 1965567 1964554 -3 - 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229914.peg.2069 CDS AP014520.1 1966679 1965567 -2 - 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229914.peg.2070 CDS AP014520.1 1967515 1966706 -1 - 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229914.peg.2071 CDS AP014520.1 1968217 1967594 -1 - 624 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229914.peg.2072 CDS AP014520.1 1968885 1968214 -3 - 672 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229914.peg.2073 CDS AP014520.1 1969535 1968882 -2 - 654 Substrate-specific component NikM of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229914.peg.2074 CDS AP014520.1 1970038 1969535 -1 - 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229914.peg.2075 CDS AP014520.1 1970740 1970045 -1 - 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229914.peg.2076 CDS AP014520.1 1971611 1970919 -2 - 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229914.peg.2077 CDS AP014520.1 1972275 1971628 -3 - 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229914.peg.2078 CDS AP014520.1 1974029 1972308 -2 - 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229914.peg.2079 CDS AP014520.1 1974725 1974042 -2 - 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229914.peg.2080 CDS AP014520.1 1974809 1974970 2 + 162 hypothetical protein - none -
fig|6666666.229914.peg.2081 CDS AP014520.1 1975089 1975991 3 + 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229914.peg.2082 CDS AP014520.1 1976046 1977554 3 + 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229914.peg.2083 CDS AP014520.1 1977900 1978013 3 + 114 hypothetical protein - none -
fig|6666666.229914.peg.2084 CDS AP014520.1 1978062 1978670 3 + 609 Xanthine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions;
Xanthine Metabolism in Bacteria
fig|6666666.229914.peg.2085 CDS AP014520.1 1978680 1978802 3 + 123 hypothetical protein - none -
fig|6666666.229914.peg.2086 CDS AP014520.1 1979596 1979871 1 + 276 Mobile element protein - none -
fig|6666666.229914.peg.2087 CDS AP014520.1 1979954 1980148 2 + 195 Mobile element protein - none -
fig|6666666.229914.peg.2088 CDS AP014520.1 1980232 1980381 1 + 150 Mobile element protein - none -
fig|6666666.229914.peg.2089 CDS AP014520.1 1982319 1980976 -3 - 1344 putative hexose phosphate transport protein - none -
fig|6666666.229914.peg.2090 CDS AP014520.1 1983140 1982337 -2 - 804 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229914.peg.2091 CDS AP014520.1 1983508 1984233 1 + 726 5-deoxy-glucuronate isomerase (EC 5.3.1.-) Inositol catabolism
fig|6666666.229914.peg.2092 CDS AP014520.1 1984832 1984969 2 + 138 hypothetical protein - none -
fig|6666666.229914.peg.2093 CDS AP014520.1 1985119 1985000 -1 - 120 hypothetical protein - none -
fig|6666666.229914.peg.2094 CDS AP014520.1 1986318 1985164 -3 - 1155 hypothetical protein - none -
fig|6666666.229914.peg.2095 CDS AP014520.1 1987385 1986318 -2 - 1068 Probable phospholipase protein - none -
fig|6666666.229914.peg.2096 CDS AP014520.1 1988521 1987382 -1 - 1140 Probable phospholipase protein - none -
fig|6666666.229914.peg.2097 CDS AP014520.1 1990777 1988525 -1 - 2253 VgrG-3 protein - none -
fig|6666666.229914.peg.2098 CDS AP014520.1 1990944 1990774 -3 - 171 hypothetical protein - none -
fig|6666666.229914.peg.2099 CDS AP014520.1 1991474 1992460 2 + 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229914.peg.2100 CDS AP014520.1 1993157 1992444 -2 - 714 SanA protein - none -
fig|6666666.229914.peg.2101 CDS AP014520.1 1993545 1994465 3 + 921 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229914.peg.2102 CDS AP014520.1 1994755 1995753 1 + 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229914.peg.2103 CDS AP014520.1 1996055 1996189 2 + 135 hypothetical protein - none -
fig|6666666.229914.peg.2104 CDS AP014520.1 1996222 1996542 1 + 321 putative cytoplasmic protein - none -
fig|6666666.229914.peg.2105 CDS AP014520.1 1997484 1996657 -3 - 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229914.peg.2106 CDS AP014520.1 1998540 1997569 -3 - 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229914.peg.2107 CDS AP014520.1 1999539 1998571 -3 - 969 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229914.peg.2108 CDS AP014520.1 2000217 1999594 -3 - 624 Hypothetical YciO protein, TsaC/YrdC paralog YrdC-YciO-Sua5 protein family
fig|6666666.229914.peg.2109 CDS AP014520.1 2001395 2000298 -2 - 1098 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229914.peg.2110 CDS AP014520.1 2003315 2001435 -2 - 1881 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229914.peg.2111 CDS AP014520.1 2003513 2003992 2 + 480 FIG002003: Protein YdjA - none -
fig|6666666.229914.peg.2112 CDS AP014520.1 2004217 2004336 1 + 120 hypothetical protein - none -
fig|6666666.229914.peg.2113 CDS AP014520.1 2005903 2004422 -1 - 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229914.peg.2114 CDS AP014520.1 2007610 2005940 -1 - 1671 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229914.peg.2115 CDS AP014520.1 2010296 2007639 -2 - 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229914.peg.2116 CDS AP014520.1 2010675 2011550 3 + 876 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229914.peg.2117 CDS AP014520.1 2014417 2011703 -1 - 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229914.peg.2118 CDS AP014520.1 2014586 2016976 2 + 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229914.peg.2119 CDS AP014520.1 2017079 2019154 2 + 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229914.peg.2120 CDS AP014520.1 2019176 2019301 2 + 126 hypothetical protein - none -
fig|6666666.229914.peg.2121 CDS AP014520.1 2019840 2019298 -3 - 543 Colicin V production protein - none -
fig|6666666.229914.peg.2122 CDS AP014520.1 2020462 2020019 -1 - 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229914.peg.2123 CDS AP014520.1 2020730 2021932 2 + 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229914.peg.2124 CDS AP014520.1 2022002 2024137 2 + 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229914.peg.2125 CDS AP014520.1 2024484 2024846 3 + 363 hypothetical protein - none -
fig|6666666.229914.peg.2126 CDS AP014520.1 2025416 2024916 -2 - 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229914.peg.2127 CDS AP014520.1 2026707 2025409 -3 - 1299 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229914.peg.2128 CDS AP014520.1 2027428 2026991 -1 - 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229914.peg.2129 CDS AP014520.1 2027921 2030155 2 + 2235 DNA internalization-related competence protein ComEC/Rec2 KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229914.peg.2130 CDS AP014520.1 2030202 2031950 3 + 1749 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229914.peg.2131 CDS AP014520.1 2031969 2032943 3 + 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229914.peg.2132 CDS AP014520.1 2032965 2033144 3 + 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229914.peg.2133 CDS AP014520.1 2033146 2033919 1 + 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229914.peg.2134 CDS AP014520.1 2034048 2035877 3 + 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229914.peg.2135 CDS AP014520.1 2036073 2036213 3 + 141 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229914.peg.2136 CDS AP014520.1 2037355 2036264 -1 - 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229914.peg.2137 CDS AP014520.1 2038226 2037375 -2 - 852 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229914.peg.2138 CDS AP014520.1 2039092 2038223 -1 - 870 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229914.peg.2139 CDS AP014520.1 2040158 2039169 -2 - 990 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229914.peg.2140 CDS AP014520.1 2041495 2040386 -1 - 1110 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229914.peg.2141 CDS AP014520.1 2042854 2042006 -1 - 849 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229914.peg.2142 CDS AP014520.1 2043363 2043482 3 + 120 hypothetical protein - none -
fig|6666666.229914.peg.2143 CDS AP014520.1 2043695 2043453 -2 - 243 DNA-damage-inducible protein d - none -
fig|6666666.229914.peg.2144 CDS AP014520.1 2045300 2043876 -2 - 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229914.peg.2145 CDS AP014520.1 2046846 2045311 -3 - 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229914.peg.2146 CDS AP014520.1 2047136 2047861 2 + 726 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229914.peg.2147 CDS AP014520.1 2048108 2049295 2 + 1188 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229914.peg.2148 CDS AP014520.1 2049422 2050033 2 + 612 hypothetical protein - none -
fig|6666666.229914.peg.2149 CDS AP014520.1 2050126 2050278 1 + 153 hypothetical protein - none -
fig|6666666.229914.peg.2150 CDS AP014520.1 2051240 2050320 -2 - 921 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229914.peg.2151 CDS AP014520.1 2051626 2051240 -1 - 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229914.peg.2152 CDS AP014520.1 2054650 2052158 -1 - 2493 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229914.peg.2153 CDS AP014520.1 2056162 2054666 -1 - 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229914.peg.2154 CDS AP014520.1 2056645 2056190 -1 - 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229914.peg.2155 CDS AP014520.1 2057371 2057553 1 + 183 hypothetical protein - none -
fig|6666666.229914.peg.2157 CDS AP014520.1 2065114 2064911 -1 - 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229914.peg.2158 CDS AP014520.1 2066133 2065201 -3 - 933 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229914.peg.2159 CDS AP014520.1 2066275 2067741 1 + 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain Purine conversions;
Purine salvage cluster
fig|6666666.229914.peg.2160 CDS AP014520.1 2068043 2068237 2 + 195 hypothetical protein - none -
fig|6666666.229914.peg.2161 CDS AP014520.1 2068897 2068448 -1 - 450 ImpA - none -
fig|6666666.229914.peg.2162 CDS AP014520.1 2069095 2069259 1 + 165 hypothetical protein - none -
fig|6666666.229914.peg.2163 CDS AP014520.1 2069376 2069741 3 + 366 hypothetical protein - none -
fig|6666666.229914.peg.2164 CDS AP014520.1 2069902 2070048 1 + 147 Mobile element protein - none -
fig|6666666.229914.peg.2165 CDS AP014520.1 2070052 2070552 1 + 501 Mobile element protein - none -
fig|6666666.229914.peg.2166 CDS AP014520.1 2070591 2071682 3 + 1092 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229914.peg.2167 CDS AP014520.1 2071852 2072679 1 + 828 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229914.peg.2168 CDS AP014520.1 2072707 2074044 1 + 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229914.peg.2169 CDS AP014520.1 2074057 2074524 1 + 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229914.peg.2170 CDS AP014520.1 2074747 2075292 1 + 546 FIG00696317: hypothetical protein - none -
fig|6666666.229914.peg.2171 CDS AP014520.1 2075976 2075314 -3 - 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229914.peg.2172 CDS AP014520.1 2076060 2076311 3 + 252 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229914.peg.2173 CDS AP014520.1 2077217 2076708 -2 - 510 probable lipoprotein NlpC - none -
fig|6666666.229914.peg.2174 CDS AP014520.1 2078250 2077396 -3 - 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation;
KDO2-Lipid A biosynthesis
fig|6666666.229914.peg.2175 CDS AP014520.1 2079159 2078260 -3 - 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229914.peg.2176 CDS AP014520.1 2080281 2079199 -3 - 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229914.peg.2177 CDS AP014520.1 2080877 2080422 -2 - 456 Outer membrane lipoprotein - none -
fig|6666666.229914.peg.2178 CDS AP014520.1 2081505 2080894 -3 - 612 Protein yecM - none -
fig|6666666.229914.peg.2179 CDS AP014520.1 2081602 2083335 1 + 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229914.peg.2180 CDS AP014520.1 2084912 2083941 -2 - 972 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229914.peg.2181 CDS AP014520.1 2084973 2085452 3 + 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229914.peg.2182 CDS AP014520.1 2087311 2085566 -1 - 1746 Ferrichrome-iron receptor - none -
fig|6666666.229914.peg.2183 CDS AP014520.1 2089503 2087365 -3 - 2139 Ferrichrome-iron receptor - none -
fig|6666666.229914.peg.2184 CDS AP014520.1 2091170 2089773 -2 - 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229914.peg.2185 CDS AP014520.1 2091197 2091811 2 + 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229914.peg.2186 CDS AP014520.1 2092140 2091844 -3 - 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229914.peg.2187 CDS AP014520.1 2092436 2092137 -2 - 300 Phage-related protein - none -
fig|6666666.229914.peg.2188 CDS AP014520.1 2092604 2092906 2 + 303 FIG004454: RNA binding protein - none -
fig|6666666.229914.peg.2189 CDS AP014520.1 2093456 2092980 -2 - 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229914.peg.2190 CDS AP014520.1 2093616 2095058 3 + 1443 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229914.peg.2191 CDS AP014520.1 2095815 2095159 -3 - 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229914.peg.2192 CDS AP014520.1 2095944 2097158 3 + 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229914.peg.2193 CDS AP014520.1 2097174 2097905 3 + 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229914.peg.2194 CDS AP014520.1 2098625 2099482 2 + 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229914.peg.2195 CDS AP014520.1 2099542 2100495 1 + 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229914.peg.2196 CDS AP014520.1 2100508 2102364 1 + 1857 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229914.peg.2197 CDS AP014520.1 2102364 2104097 3 + 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229914.peg.2198 CDS AP014520.1 2104361 2105227 2 + 867 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.229914.peg.2199 CDS AP014520.1 2106237 2105452 -3 - 786 serine/threonine protein kinase - none -
fig|6666666.229914.peg.2200 CDS AP014520.1 2106779 2106258 -2 - 522 unknown - none -
fig|6666666.229914.peg.2201 CDS AP014520.1 2106978 2107562 3 + 585 Putative lipoprotein yceB precursor - none -
fig|6666666.229914.peg.2202 CDS AP014520.1 2109252 2108338 -3 - 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229914.peg.2203 CDS AP014520.1 2110030 2109302 -1 - 729 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229914.peg.2204 CDS AP014520.1 2110119 2110772 3 + 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229914.peg.2205 CDS AP014520.1 2111051 2111791 2 + 741 FIG00698611: hypothetical protein - none -
fig|6666666.229914.peg.2206 CDS AP014520.1 2112447 2111953 -3 - 495 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229914.peg.2207 CDS AP014520.1 2112980 2112438 -2 - 543 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229914.peg.2208 CDS AP014520.1 2113799 2113005 -2 - 795 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229914.peg.2209 CDS AP014520.1 2114602 2113799 -1 - 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229914.peg.2210 CDS AP014520.1 2114871 2114746 -3 - 126 hypothetical protein - none -
fig|6666666.229914.peg.2211 CDS AP014520.1 2115129 2115010 -3 - 120 hypothetical protein - none -
fig|6666666.229914.peg.2212 CDS AP014520.1 2116561 2115143 -1 - 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229914.peg.2213 CDS AP014520.1 2117471 2116524 -2 - 948 O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-) - none -
fig|6666666.229914.peg.2214 CDS AP014520.1 2118478 2117468 -1 - 1011 Probable membrane protein - none -
fig|6666666.229914.peg.2215 CDS AP014520.1 2123899 2119592 -1 - 4308 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.229914.peg.2216 CDS AP014520.1 2125092 2123896 -3 - 1197 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) Rhamnose containing glycans;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229914.peg.2217 CDS AP014520.1 2125888 2125094 -1 - 795 Teichoic acid translocation permease protein TagG Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229914.peg.2218 CDS AP014520.1 2126444 2125905 -2 - 540 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229914.peg.2219 CDS AP014520.1 2127325 2126447 -1 - 879 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229914.peg.2220 CDS AP014520.1 2128198 2127326 -1 - 873 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229914.peg.2221 CDS AP014520.1 2129343 2128276 -3 - 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229914.peg.2222 CDS AP014520.1 2130420 2129413 -3 - 1008 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229914.peg.2223 CDS AP014520.1 2130410 2130556 2 + 147 hypothetical protein - none -
fig|6666666.229914.peg.2224 CDS AP014520.1 2131354 2130545 -1 - 810 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229914.peg.2225 CDS AP014520.1 2132304 2131423 -3 - 882 Glycosyltransferase - none -
fig|6666666.229914.peg.2226 CDS AP014520.1 2133497 2132304 -2 - 1194 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229914.peg.2227 CDS AP014520.1 2134282 2133506 -1 - 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229914.peg.2228 CDS AP014520.1 2134413 2135936 3 + 1524 putative flippase - none -
fig|6666666.229914.peg.2229 CDS AP014520.1 2135933 2136889 2 + 957 Polysaccharide polymerization protein - none -
fig|6666666.229914.peg.2230 CDS AP014520.1 2136998 2137249 2 + 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.2231 CDS AP014520.1 2137246 2137500 1 + 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229914.peg.2232 CDS AP014520.1 2137513 2138271 1 + 759 Probable transmembrane protein - none -
fig|6666666.229914.peg.2233 CDS AP014520.1 2138300 2138419 2 + 120 hypothetical protein - none -
fig|6666666.229914.peg.2234 CDS AP014520.1 2138430 2139257 3 + 828 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229914.peg.2235 CDS AP014520.1 2141564 2139390 -2 - 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229914.peg.2236 CDS AP014520.1 2143086 2141737 -3 - 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229914.peg.2237 CDS AP014520.1 2143304 2143822 2 + 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229914.peg.2238 CDS AP014520.1 2144890 2143892 -1 - 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229914.peg.2239 CDS AP014520.1 2145763 2144939 -1 - 825 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229914.peg.2240 CDS AP014520.1 2145984 2149094 3 + 3111 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229914.peg.2241 CDS AP014520.1 2149192 2150106 1 + 915 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229914.peg.2242 CDS AP014520.1 2150135 2150731 2 + 597 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229914.peg.2243 CDS AP014520.1 2150881 2150997 1 + 117 hypothetical protein - none -
fig|6666666.229914.peg.2244 CDS AP014520.1 2153637 2151352 -3 - 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229914.peg.2245 CDS AP014520.1 2153933 2154532 2 + 600 Hydrogenase-4 component A - none -
fig|6666666.229914.peg.2246 CDS AP014520.1 2154565 2156586 1 + 2022 Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 Formate hydrogenase
fig|6666666.229914.peg.2247 CDS AP014520.1 2156594 2157559 2 + 966 Hydrogenase-4 component C - none -
fig|6666666.229914.peg.2248 CDS AP014520.1 2157572 2159017 2 + 1446 Hydrogenase-4 component D - none -
fig|6666666.229914.peg.2249 CDS AP014520.1 2159028 2159666 3 + 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229914.peg.2250 CDS AP014520.1 2159671 2161209 1 + 1539 Hydrogenase-4 component F - none -
fig|6666666.229914.peg.2251 CDS AP014520.1 2161228 2162958 1 + 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229914.peg.2252 CDS AP014520.1 2162972 2163619 2 + 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229914.peg.2253 CDS AP014520.1 2163616 2164392 1 + 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229914.peg.2254 CDS AP014520.1 2164474 2164878 1 + 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229914.peg.2255 CDS AP014520.1 2164868 2165329 2 + 462 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) Hydrogenases
fig|6666666.229914.peg.2256 CDS AP014520.1 2165457 2166470 3 + 1014 cell filamentation protein Fic-related protein - none -
fig|6666666.229914.peg.2257 CDS AP014520.1 2166824 2169046 2 + 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229914.peg.2260 CDS AP014520.1 2171380 2170088 -1 - 1293 hypothetical protein - none -
fig|6666666.229914.peg.2261 CDS AP014520.1 2172285 2171413 -3 - 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229914.peg.2262 CDS AP014520.1 2173660 2172296 -1 - 1365 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229914.peg.2263 CDS AP014520.1 2174873 2173650 -2 - 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229914.peg.2264 CDS AP014520.1 2177806 2174999 -1 - 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229914.peg.2265 CDS AP014520.1 2177891 2178013 2 + 123 hypothetical protein - none -
fig|6666666.229914.peg.2266 CDS AP014520.1 2178723 2178085 -3 - 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229914.peg.2267 CDS AP014520.1 2179360 2178800 -1 - 561 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229914.peg.2268 CDS AP014520.1 2180933 2179425 -2 - 1509 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229914.peg.2269 CDS AP014520.1 2183068 2181011 -1 - 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229914.peg.2270 CDS AP014520.1 2183753 2183142 -2 - 612 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229914.peg.2271 CDS AP014520.1 2183971 2185254 1 + 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229914.peg.2272 CDS AP014520.1 2185217 2185696 2 + 480 Paraquat-inducible protein B Oxidative stress
fig|6666666.229914.peg.2273 CDS AP014520.1 2185672 2187873 1 + 2202 Paraquat-inducible protein B Oxidative stress
fig|6666666.229914.peg.2274 CDS AP014520.1 2189192 2187948 -2 - 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229914.peg.2275 CDS AP014520.1 2189456 2190574 2 + 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229914.peg.2276 CDS AP014520.1 2190558 2191418 3 + 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229914.peg.2277 CDS AP014520.1 2191418 2192191 2 + 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229914.peg.2278 CDS AP014520.1 2192322 2193419 3 + 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229914.peg.2279 CDS AP014520.1 2193542 2194438 2 + 897 Cytidine deaminase (EC 3.5.4.5) pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229914.peg.2280 CDS AP014520.1 2195834 2194518 -2 - 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229914.peg.2281 CDS AP014520.1 2196141 2197808 3 + 1668 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229914.peg.2282 CDS AP014520.1 2197947 2198069 3 + 123 hypothetical protein - none -
fig|6666666.229914.peg.2283 CDS AP014520.1 2199644 2198304 -2 - 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229914.peg.2284 CDS AP014520.1 2200274 2199657 -2 - 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229914.peg.2285 CDS AP014520.1 2203111 2200367 -1 - 2745 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229914.peg.2286 CDS AP014520.1 2203594 2203115 -1 - 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229914.peg.2287 CDS AP014520.1 2203708 2203881 1 + 174 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229914.peg.2288 CDS AP014520.1 2205314 2204310 -2 - 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229914.peg.2289 CDS AP014520.1 2206007 2205360 -2 - 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229914.peg.2290 CDS AP014520.1 2207619 2205991 -3 - 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229914.peg.2291 CDS AP014520.1 2208632 2207628 -2 - 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229914.peg.2292 CDS AP014520.1 2209034 2208654 -2 - 381 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229914.peg.2293 CDS AP014520.1 2210015 2209860 -2 - 156 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229914.peg.2294 CDS AP014520.1 2211043 2210339 -1 - 705 hypothetical protein - none -
fig|6666666.229914.peg.2295 CDS AP014520.1 2211759 2211109 -3 - 651 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229914.peg.2296 CDS AP014520.1 2212770 2211904 -3 - 867 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229914.peg.2297 CDS AP014520.1 2213166 2212783 -3 - 384 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229914.peg.2298 CDS AP014520.1 2214560 2213163 -2 - 1398 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229914.peg.2299 CDS AP014520.1 2215231 2214557 -1 - 675 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229914.peg.2300 CDS AP014520.1 2218063 2215346 -1 - 2718 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229914.peg.2301 CDS AP014520.1 2219094 2218060 -3 - 1035 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229914.peg.2302 CDS AP014520.1 2219221 2219078 -1 - 144 hypothetical protein - none -
fig|6666666.229914.peg.2303 CDS AP014520.1 2220957 2219221 -3 - 1737 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229914.peg.2304 CDS AP014520.1 2221912 2220971 -1 - 942 FIG00807791: hypothetical protein - none -
fig|6666666.229914.peg.2305 CDS AP014520.1 2224480 2222483 -1 - 1998 helicase (Snf2/Rad54 family) - none -
fig|6666666.229914.peg.2306 CDS AP014520.1 2224755 2224477 -3 - 279 helicase (Snf2/Rad54 family) - none -
fig|6666666.229914.peg.2307 CDS AP014520.1 2225393 2224776 -2 - 618 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229914.peg.2308 CDS AP014520.1 2227317 2225530 -3 - 1788 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229914.peg.2309 CDS AP014520.1 2227782 2227348 -3 - 435 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229914.peg.2310 CDS AP014520.1 2228098 2228760 1 + 663 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229914.peg.2311 CDS AP014520.1 2228846 2229175 2 + 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) CBSS-326442.4.peg.1852;
Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229914.peg.2312 CDS AP014520.1 2229273 2229797 3 + 525 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229914.peg.2313 CDS AP014520.1 2229782 2230153 2 + 372 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229914.peg.2314 CDS AP014520.1 2230153 2231043 1 + 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229914.peg.2315 CDS AP014520.1 2231043 2231900 3 + 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229914.peg.2316 CDS AP014520.1 2231897 2232745 2 + 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229914.peg.2317 CDS AP014520.1 2232992 2232720 -2 - 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229914.peg.2318 CDS AP014520.1 2233137 2233844 3 + 708 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229914.peg.2319 CDS AP014520.1 2233878 2234336 3 + 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229914.peg.2320 CDS AP014520.1 2234336 2234809 2 + 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229914.peg.2321 CDS AP014520.1 2234818 2236959 1 + 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229914.peg.2322 CDS AP014520.1 2237462 2236956 -2 - 507 FIG001674: hypothetical protein - none -
fig|6666666.229914.peg.2323 CDS AP014520.1 2237525 2238475 2 + 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p YrdC-YciO-Sua5 protein family
fig|6666666.229914.peg.2324 CDS AP014520.1 2239586 2238642 -2 - 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229914.peg.2325 CDS AP014520.1 2240400 2239576 -3 - 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229914.peg.2326 CDS AP014520.1 2241765 2240410 -3 - 1356 FIG00732228: membrane protein - none -
fig|6666666.229914.peg.2327 CDS AP014520.1 2242051 2241782 -1 - 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229914.peg.2328 CDS AP014520.1 2243236 2242619 -1 - 618 hypothetical protein - none -
fig|6666666.229914.peg.2329 CDS AP014520.1 2244476 2244147 -2 - 330 hypothetical protein - none -
fig|6666666.229914.peg.2330 CDS AP014520.1 2245268 2244513 -2 - 756 hypothetical protein - none -
fig|6666666.229914.peg.2331 CDS AP014520.1 2245634 2245512 -2 - 123 hypothetical protein - none -
fig|6666666.229914.peg.2332 CDS AP014520.1 2247596 2245650 -2 - 1947 VgrG-3 protein - none -
fig|6666666.229914.peg.2333 CDS AP014520.1 2247763 2247593 -1 - 171 hypothetical protein - none -
fig|6666666.229914.peg.2334 CDS AP014520.1 2250285 2247928 -3 - 2358 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229914.peg.2335 CDS AP014520.1 2251148 2250405 -2 - 744 Putative membrane protein YeiH - none -
fig|6666666.229914.peg.2336 CDS AP014520.1 2257358 2251587 -2 - 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229914.peg.2337 CDS AP014520.1 2258872 2257424 -1 - 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229914.peg.2338 CDS AP014520.1 2259295 2259167 -1 - 129 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229914.peg.2339 CDS AP014520.1 2260026 2259292 -3 - 735 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229914.peg.2340 CDS AP014520.1 2260637 2260023 -2 - 615 ABC transporter ATP-binding protein - none -
fig|6666666.229914.peg.2341 CDS AP014520.1 2261443 2260640 -1 - 804 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229914.peg.2342 CDS AP014520.1 2262146 2261484 -2 - 663 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229914.peg.2343 CDS AP014520.1 2262625 2262810 1 + 186 Mobile element protein - none -
fig|6666666.229914.peg.2344 CDS AP014520.1 2262852 2263100 3 + 249 Mobile element protein - none -
fig|6666666.229914.peg.2345 CDS AP014520.1 2264620 2263187 -1 - 1434 Putative GTP-binding protein YdgA - none -
fig|6666666.229914.peg.2346 CDS AP014520.1 2264909 2266810 2 + 1902 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229914.peg.2347 CDS AP014520.1 2267252 2268379 2 + 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229914.peg.2348 CDS AP014520.1 2268804 2268457 -3 - 348 Programmed cell death toxin ChpB - none -
fig|6666666.229914.peg.2349 CDS AP014520.1 2269061 2268804 -2 - 258 hypothetical protein - none -
fig|6666666.229914.peg.2350 CDS AP014520.1 2270258 2269206 -2 - 1053 Outer membrane protein P2 precursor (OMP P2) - none -
fig|6666666.229914.peg.2351 CDS AP014520.1 2271661 2270471 -1 - 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229914.peg.2352 CDS AP014520.1 2271916 2272473 1 + 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.2353 CDS AP014520.1 2274444 2273746 -3 - 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229914.peg.2354 CDS AP014520.1 2275107 2274460 -3 - 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229914.peg.2355 CDS AP014520.1 2276699 2275224 -2 - 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229914.peg.2356 CDS AP014520.1 2276838 2278358 3 + 1521 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229914.peg.2357 CDS AP014520.1 2278372 2279337 1 + 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229914.peg.2358 CDS AP014520.1 2279425 2280723 1 + 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229914.peg.2359 CDS AP014520.1 2281077 2280787 -3 - 291 hypothetical protein - none -
fig|6666666.229914.peg.2360 CDS AP014520.1 2282083 2281100 -1 - 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229914.peg.2361 CDS AP014520.1 2282371 2283903 1 + 1533 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229914.peg.2362 CDS AP014520.1 2285169 2283973 -3 - 1197 Sugar efflux transporter SotB - none -
fig|6666666.229914.peg.2363 CDS AP014520.1 2286373 2285171 -1 - 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229914.peg.2364 CDS AP014520.1 2286958 2286374 -1 - 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229914.peg.2365 CDS AP014520.1 2287618 2286968 -1 - 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229914.peg.2366 CDS AP014520.1 2287927 2288967 1 + 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229914.peg.2367 CDS AP014520.1 2289418 2290170 1 + 753 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229914.peg.2368 CDS AP014520.1 2290198 2291490 1 + 1293 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229914.peg.2369 CDS AP014520.1 2291625 2292254 3 + 630 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229914.peg.2370 CDS AP014520.1 2292270 2293316 3 + 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229914.peg.2371 CDS AP014520.1 2293595 2295715 2 + 2121 unknown - none -
fig|6666666.229914.peg.2372 CDS AP014520.1 2297525 2296953 -2 - 573 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.229914.peg.2373 CDS AP014520.1 2298314 2297655 -2 - 660 putative membrane protein - none -
fig|6666666.229914.peg.2374 CDS AP014520.1 2298511 2298395 -1 - 117 hypothetical protein - none -
fig|6666666.229914.peg.2375 CDS AP014520.1 2298526 2299332 1 + 807 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229914.peg.2376 CDS AP014520.1 2299842 2299594 -3 - 249 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229914.peg.2377 CDS AP014520.1 2300600 2299929 -2 - 672 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229914.peg.2378 CDS AP014520.1 2300758 2302131 1 + 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229914.peg.2379 CDS AP014520.1 2302439 2302314 -2 - 126 hypothetical protein - none -
fig|6666666.229914.peg.2380 CDS AP014520.1 2302509 2303627 3 + 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229914.peg.2381 CDS AP014520.1 2303627 2304397 2 + 771 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway - none -
fig|6666666.229914.peg.2382 CDS AP014520.1 2304495 2305514 3 + 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229914.peg.2383 CDS AP014520.1 2305642 2306454 1 + 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229914.peg.2384 CDS AP014520.1 2307409 2306993 -1 - 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229914.peg.2385 CDS AP014520.1 2307530 2307910 2 + 381 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229914.peg.2386 CDS AP014520.1 2307903 2308196 3 + 294 UPF0125 protein yfjF - none -
fig|6666666.229914.peg.2387 CDS AP014520.1 2308229 2309422 2 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229914.peg.2388 CDS AP014520.1 2309429 2310763 2 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229914.peg.2389 CDS AP014520.1 2311623 2310769 -3 - 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229914.peg.2390 CDS AP014520.1 2312184 2311732 -3 - 453 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229914.peg.2391 CDS AP014520.1 2312913 2312188 -3 - 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229914.peg.2392 CDS AP014520.1 2313437 2312919 -2 - 519 LptA, protein essential for LPS transport across the periplasm KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229914.peg.2393 CDS AP014520.1 2313993 2313418 -3 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229914.peg.2394 CDS AP014520.1 2314106 2313990 -2 - 117 hypothetical protein - none -
fig|6666666.229914.peg.2395 CDS AP014520.1 2314276 2315073 1 + 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229914.peg.2396 CDS AP014520.1 2315067 2315852 3 + 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229914.peg.2397 CDS AP014520.1 2315875 2316384 1 + 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229914.peg.2398 CDS AP014520.1 2316413 2317054 2 + 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229914.peg.2399 CDS AP014520.1 2317148 2317417 2 + 270 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229914.peg.2400 CDS AP014520.1 2317417 2317674 1 + 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229914.peg.2401 CDS AP014520.1 2317691 2318968 2 + 1278 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229914.peg.2402 CDS AP014520.1 2319320 2319030 -2 - 291 FIG00696346: hypothetical protein - none -
fig|6666666.229914.peg.2403 CDS AP014520.1 2319524 2320954 2 + 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229914.peg.2404 CDS AP014520.1 2321031 2321570 3 + 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229914.peg.2405 CDS AP014520.1 2321567 2322235 2 + 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229914.peg.2406 CDS AP014520.1 2322300 2323025 3 + 726 Integral membrane protein TerC - none -
fig|6666666.229914.peg.2407 CDS AP014520.1 2324543 2323134 -2 - 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229914.peg.2408 CDS AP014520.1 2324929 2326782 1 + 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229914.peg.2409 CDS AP014520.1 2326892 2326779 -2 - 114 hypothetical protein - none -
fig|6666666.229914.peg.2410 CDS AP014520.1 2327007 2329517 3 + 2511 TolA protein Ton and Tol transport systems
fig|6666666.229914.peg.2411 CDS AP014520.1 2329946 2329581 -2 - 366 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229914.peg.2412 CDS AP014520.1 2330044 2329919 -1 - 126 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229914.peg.2413 CDS AP014520.1 2330295 2331092 3 + 798 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229914.peg.2414 CDS AP014520.1 2331205 2332209 1 + 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229914.peg.2415 CDS AP014520.1 2332344 2333855 3 + 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229914.peg.2416 CDS AP014520.1 2334170 2335006 2 + 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229914.peg.2417 CDS AP014520.1 2335754 2335059 -2 - 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229914.peg.2418 CDS AP014520.1 2337135 2335747 -3 - 1389 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229914.peg.2419 CDS AP014520.1 2337274 2337405 1 + 132 hypothetical protein - none -
fig|6666666.229914.peg.2420 CDS AP014520.1 2337494 2339941 2 + 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229914.peg.2421 CDS AP014520.1 2339954 2340898 2 + 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229914.peg.2422 CDS AP014520.1 2341098 2341364 3 + 267 hypothetical protein - none -
fig|6666666.229914.peg.2423 CDS AP014520.1 2341420 2342694 1 + 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229914.peg.2424 CDS AP014520.1 2342753 2343514 2 + 762 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229914.peg.2425 CDS AP014520.1 2343572 2343727 2 + 156 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229914.peg.2426 CDS AP014520.1 2343756 2344823 3 + 1068 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229914.peg.2427 CDS AP014520.1 2344823 2345710 2 + 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229914.peg.2428 CDS AP014520.1 2345740 2345865 1 + 126 hypothetical protein - none -
fig|6666666.229914.peg.2429 CDS AP014520.1 2347186 2345888 -1 - 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229914.peg.2430 CDS AP014520.1 2348243 2347350 -2 - 894 Tyrosine recombinase XerD - none -
fig|6666666.229914.peg.2431 CDS AP014520.1 2348506 2348246 -1 - 261 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229914.peg.2432 CDS AP014520.1 2348748 2349653 3 + 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229914.peg.2433 CDS AP014520.1 2350118 2349744 -2 - 375 opacity associated protein - none -
fig|6666666.229914.peg.2434 CDS AP014520.1 2351502 2350180 -3 - 1323 Cell envelope opacity-associated protein A - none -
fig|6666666.229914.peg.2435 CDS AP014520.1 2352705 2351674 -3 - 1032 Lysyl-lysine 2,3-aminomutase Translation elongation factor P lysylation
fig|6666666.229914.peg.2436 CDS AP014520.1 2352770 2353291 2 + 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229914.peg.2437 CDS AP014520.1 2353621 2354997 1 + 1377 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229914.peg.2438 CDS AP014520.1 2355159 2356373 3 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229914.peg.2439 CDS AP014520.1 2357005 2356439 -1 - 567 YheO-like PAS domain - none -
fig|6666666.229914.peg.2440 CDS AP014520.1 2357684 2357178 -2 - 507 Arabinose efflux permease - none -
fig|6666666.229914.peg.2441 CDS AP014520.1 2358408 2357677 -3 - 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229914.peg.2442 CDS AP014520.1 2358519 2359262 3 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229914.peg.2443 CDS AP014520.1 2359270 2360682 1 + 1413 Putative cell division protein precursor - none -
fig|6666666.229914.peg.2444 CDS AP014520.1 2361617 2360754 -2 - 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229914.peg.2445 CDS AP014520.1 2362406 2361759 -2 - 648 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229914.peg.2446 CDS AP014520.1 2364249 2362645 -3 - 1605 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229914.peg.2447 CDS AP014520.1 2364956 2364333 -2 - 624 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229914.peg.2448 CDS AP014520.1 2365876 2365055 -1 - 822 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229914.peg.2449 CDS AP014520.1 2366218 2366568 1 + 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229914.peg.2450 CDS AP014520.1 2366569 2366922 1 + 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229914.peg.2451 CDS AP014520.1 2366924 2367970 2 + 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229914.peg.2452 CDS AP014520.1 2367972 2368904 3 + 933 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229914.peg.2453 CDS AP014520.1 2368988 2369149 2 + 162 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229914.peg.2454 CDS AP014520.1 2370214 2369249 -1 - 966 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229914.peg.2455 CDS AP014520.1 2371196 2370276 -2 - 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229914.peg.2456 CDS AP014520.1 2371735 2371196 -1 - 540 FIG00696199: hypothetical protein - none -
fig|6666666.229914.peg.2457 CDS AP014520.1 2372542 2371763 -1 - 780 UPF0246 protein YaaA - none -
fig|6666666.229914.peg.2458 CDS AP014520.1 2373232 2372564 -1 - 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229914.peg.2459 CDS AP014520.1 2373517 2373900 1 + 384 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229914.peg.2460 CDS AP014520.1 2374064 2375860 2 + 1797 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229914.peg.2461 CDS AP014520.1 2375871 2376893 3 + 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229914.peg.2462 CDS AP014520.1 2376900 2377580 3 + 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229914.peg.2463 CDS AP014520.1 2377577 2378485 2 + 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases;
tRNA modification Archaea
fig|6666666.229914.peg.2464 CDS AP014520.1 2379944 2378589 -2 - 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229914.peg.2465 CDS AP014520.1 2381683 2380073 -1 - 1611 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229914.peg.2466 CDS AP014520.1 2381967 2381704 -3 - 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229914.peg.2467 CDS AP014520.1 2382257 2381922 -2 - 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229914.peg.2468 CDS AP014520.1 2382437 2382303 -2 - 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.229914.peg.2469 CDS AP014520.1 2382688 2382816 1 + 129 hypothetical protein - none -
fig|6666666.229914.rna.1 RNA AP014520.1 75958 75872 -1 - 87 tRNA-Ser-GGA tRNAs
fig|6666666.229914.rna.2 RNA AP014520.1 122856 122929 3 + 74 tRNA-Met-CAT - none -
fig|6666666.229914.rna.3 RNA AP014520.1 156856 156738 -1 - 119 5S RNA - none -
fig|6666666.229914.rna.4 RNA AP014520.1 160147 157105 -1 - 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229914.rna.5 RNA AP014520.1 160502 160430 -2 - 73 tRNA-Ala-TGC - none -
fig|6666666.229914.rna.6 RNA AP014520.1 160628 160555 -2 - 74 tRNA-Ile-GAT - none -
fig|6666666.229914.rna.7 RNA AP014520.1 162251 160712 -2 - 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229914.rna.8 RNA AP014520.1 204210 204137 -3 - 74 tRNA-Arg-TCT - none -
fig|6666666.229914.rna.9 RNA AP014520.1 204320 204247 -2 - 74 tRNA-Pro-TGG - none -
fig|6666666.229914.rna.10 RNA AP014520.1 226825 226915 1 + 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229914.rna.11 RNA AP014520.1 302532 302622 3 + 91 tRNA-Ser-GCT - none -
fig|6666666.229914.rna.12 RNA AP014520.1 302643 302716 3 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.229914.rna.13 RNA AP014520.1 302774 302847 2 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.229914.rna.14 RNA AP014520.1 449097 450635 3 + 1539 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229914.rna.15 RNA AP014520.1 450719 450792 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.229914.rna.16 RNA AP014520.1 450845 450917 2 + 73 tRNA-Ala-TGC - none -
fig|6666666.229914.rna.17 RNA AP014520.1 451200 454242 3 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229914.rna.18 RNA AP014520.1 454491 454609 3 + 119 5S RNA - none -
fig|6666666.229914.rna.19 RNA AP014520.1 660599 660671 2 + 73 tRNA-Thr-TGT - none -
fig|6666666.229914.rna.20 RNA AP014520.1 660705 660786 3 + 82 tRNA-Tyr-GTA - none -
fig|6666666.229914.rna.21 RNA AP014520.1 660830 660901 2 + 72 tRNA-Gly-TCC - none -
fig|6666666.229914.rna.22 RNA AP014520.1 660908 660980 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.229914.rna.23 RNA AP014520.1 745322 745250 -2 - 73 tRNA-Asn-GTT - none -
fig|6666666.229914.rna.24 RNA AP014520.1 745402 745330 -1 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.229914.rna.25 RNA AP014520.1 877662 879201 3 + 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229914.rna.26 RNA AP014520.1 879297 879369 3 + 73 tRNA-Glu-TTC - none -
fig|6666666.229914.rna.27 RNA AP014520.1 879579 882622 3 + 3044 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229914.rna.28 RNA AP014520.1 882871 882989 1 + 119 5S RNA - none -
fig|6666666.229914.rna.29 RNA AP014520.1 913562 913479 -2 - 84 tRNA-Leu-CAG tRNAs
fig|6666666.229914.rna.30 RNA AP014520.1 941859 941777 -3 - 83 tRNA-Leu-GAG tRNAs
fig|6666666.229914.rna.31 RNA AP014520.1 1071857 1073401 2 + 1545 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229914.rna.32 RNA AP014520.1 1073497 1073569 1 + 73 tRNA-Glu-TTC - none -
fig|6666666.229914.rna.33 RNA AP014520.1 1073778 1076765 3 + 2988 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229914.rna.34 RNA AP014520.1 1077014 1077132 2 + 119 5S RNA - none -
fig|6666666.229914.rna.35 RNA AP014520.1 1111522 1111450 -1 - 73 tRNA-Val-TAC - none -
fig|6666666.229914.rna.36 RNA AP014520.1 1111636 1111564 -1 - 73 tRNA-Val-TAC - none -
fig|6666666.229914.rna.37 RNA AP014520.1 1113449 1113521 2 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.229914.rna.38 RNA AP014520.1 1122263 1122176 -2 - 88 tRNA-Leu-AAG - none -
fig|6666666.229914.rna.39 RNA AP014520.1 1192778 1192708 -2 - 71 tRNA-Cys-GCA tRNAs
fig|6666666.229914.rna.40 RNA AP014520.1 1192862 1192790 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229914.rna.41 RNA AP014520.1 1200256 1200342 1 + 87 tRNA-Ser-TGA - none -
fig|6666666.229914.rna.42 RNA AP014520.1 1248800 1248872 2 + 73 tRNA-Lys-TTT - none -
fig|6666666.229914.rna.43 RNA AP014520.1 1248903 1248975 3 + 73 tRNA-Lys-TTT - none -
fig|6666666.229914.rna.44 RNA AP014520.1 1249004 1249077 2 + 74 tRNA-Lys-CTT - none -
fig|6666666.229914.rna.45 RNA AP014520.1 1359064 1358991 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.229914.rna.46 RNA AP014520.1 1359163 1359090 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.229914.rna.47 RNA AP014520.1 1420137 1420065 -3 - 73 tRNA-Asn-GTT - none -
fig|6666666.229914.rna.48 RNA AP014520.1 1435968 1436041 3 + 74 tRNA-Met-CAT - none -
fig|6666666.229914.rna.49 RNA AP014520.1 1436050 1436131 1 + 82 tRNA-Leu-TAG - none -
fig|6666666.229914.rna.50 RNA AP014520.1 1436244 1436316 3 + 73 tRNA-Gln-TTG - none -
fig|6666666.229914.rna.51 RNA AP014520.1 1436357 1436428 2 + 72 tRNA-Gln-TTG - none -
fig|6666666.229914.rna.52 RNA AP014520.1 1488856 1488929 1 + 74 tRNA-Arg-CCG tRNAs
fig|6666666.229914.rna.53 RNA AP014520.1 1488964 1489036 1 + 73 tRNA-His-GTG - none -
fig|6666666.229914.rna.54 RNA AP014520.1 1489042 1489115 1 + 74 tRNA-Pro-TGG - none -
fig|6666666.229914.rna.55 RNA AP014520.1 1489303 1490845 1 + 1543 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229914.rna.56 RNA AP014520.1 1490929 1491002 1 + 74 tRNA-Ile-GAT - none -
fig|6666666.229914.rna.57 RNA AP014520.1 1491055 1491127 1 + 73 tRNA-Ala-TGC - none -
fig|6666666.229914.rna.58 RNA AP014520.1 1491410 1494453 2 + 3044 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229914.rna.59 RNA AP014520.1 1494681 1494799 3 + 119 5S RNA - none -
fig|6666666.229914.rna.60 RNA AP014520.1 1532002 1531930 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229914.rna.61 RNA AP014520.1 1769055 1769137 3 + 83 tRNA-Leu-CAA tRNAs
fig|6666666.229914.rna.62 RNA AP014520.1 1792668 1792594 -3 - 75 tRNA-Val-GAC tRNAs
fig|6666666.229914.rna.63 RNA AP014520.1 1895099 1895029 -2 - 71 tRNA-Pseudo-AAC - none -
fig|6666666.229914.rna.64 RNA AP014520.1 2056874 2056801 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.229914.rna.65 RNA AP014520.1 2058899 2058827 -2 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.229914.rna.66 RNA AP014520.1 2059010 2058937 -2 - 74 tRNA-Asp-GTC - none -
fig|6666666.229914.rna.67 RNA AP014520.1 2059135 2059017 -1 - 119 5S RNA - none -
fig|6666666.229914.rna.68 RNA AP014520.1 2059301 2059183 -2 - 119 5S RNA - none -
fig|6666666.229914.rna.69 RNA AP014520.1 2062591 2059550 -1 - 3042 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229914.rna.70 RNA AP014520.1 2062874 2062801 -2 - 74 tRNA-Glu-TTC - none -
fig|6666666.229914.rna.71 RNA AP014520.1 2064508 2062970 -1 - 1539 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229914.rna.72 RNA AP014520.1 2272634 2272706 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229914.rna.73 RNA AP014520.1 2272711 2272794 1 + 84 tRNA-Leu-TAA - none -
fig|6666666.229914.rna.74 RNA AP014520.1 2272849 2272921 1 + 73 tRNA-Lys-TTT - none -
fig|6666666.229914.rna.75 RNA AP014520.1 2302270 2302197 -1 - 74 tRNA-Met-CAT - none -