fig|6666666.229919.peg.1 CDS AZTY01000002.1 245 1435 2 + 1191 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229919.peg.2 CDS AZTY01000002.1 2049 1486 -3 - 564 Transcriptional regulator, TetR family - none -
fig|6666666.229919.peg.3 CDS AZTY01000002.1 2197 3177 1 + 981 HlyD family secretion protein - none -
fig|6666666.229919.peg.4 CDS AZTY01000002.1 3180 5924 3 + 2745 ABC-type multidrug transport system, permease component - none -
fig|6666666.229919.peg.5 CDS AZTY01000002.1 5926 7053 1 + 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229919.peg.6 CDS AZTY01000003.1 12 1145 3 + 1134 lipoprotein, putative - none -
fig|6666666.229919.peg.7 CDS AZTY01000003.1 1271 2566 2 + 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229919.peg.8 CDS AZTY01000003.1 2692 3471 1 + 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229919.peg.9 CDS AZTY01000003.1 3494 4177 2 + 684 L-Cystine ABC transporter, permease protein TcyB - none -
fig|6666666.229919.peg.10 CDS AZTY01000003.1 4187 4954 2 + 768 ABC-type polar amino acid transport system, ATPase component - none -
fig|6666666.229919.peg.11 CDS AZTY01000003.1 5249 4959 -2 - 291 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229919.peg.12 CDS AZTY01000003.1 5611 5249 -1 - 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229919.peg.13 CDS AZTY01000004.1 183 2300 3 + 2118 Probable phospholipase protein - none -
fig|6666666.229919.peg.14 CDS AZTY01000005.1 138 743 3 + 606 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229919.peg.15 CDS AZTY01000005.1 773 1114 2 + 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229919.peg.16 CDS AZTY01000005.1 1333 2331 1 + 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229919.peg.17 CDS AZTY01000005.1 2412 3932 3 + 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229919.peg.18 CDS AZTY01000005.1 3948 5006 3 + 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229919.peg.19 CDS AZTY01000005.1 5995 5027 -1 - 969 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229919.peg.20 CDS AZTY01000005.1 6652 5999 -1 - 654 DnaJ-like protein DjlA - none -
fig|6666666.229919.peg.21 CDS AZTY01000007.1 600 328 -3 - 273 Phage integrase - none -
fig|6666666.229919.peg.22 CDS AZTY01000007.1 2845 995 -1 - 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229919.peg.23 CDS AZTY01000007.1 3535 2921 -1 - 615 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229919.peg.24 CDS AZTY01000008.1 2834 1299 -2 - 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229919.peg.25 CDS AZTY01000008.1 3127 3852 1 + 726 Sugar/maltose fermentation stimulation protein homolog - none -
fig|6666666.229919.peg.26 CDS AZTY01000008.1 4100 5287 2 + 1188 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229919.peg.27 CDS AZTY01000008.1 5414 6025 2 + 612 hypothetical protein - none -
fig|6666666.229919.peg.28 CDS AZTY01000008.1 6118 6270 1 + 153 hypothetical protein - none -
fig|6666666.229919.peg.29 CDS AZTY01000008.1 7232 6312 -2 - 921 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229919.peg.30 CDS AZTY01000008.1 7618 7232 -1 - 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229919.peg.31 CDS AZTY01000008.1 10642 8150 -1 - 2493 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229919.peg.32 CDS AZTY01000008.1 12154 10658 -1 - 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229919.peg.33 CDS AZTY01000008.1 12637 12182 -1 - 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229919.peg.34 CDS AZTY01000010.1 541 1083 1 + 543 hypothetical protein - none -
fig|6666666.229919.peg.35 CDS AZTY01000011.1 607 293 -1 - 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229919.peg.36 CDS AZTY01000011.1 715 1497 1 + 783 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229919.peg.37 CDS AZTY01000011.1 1506 2345 3 + 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229919.peg.38 CDS AZTY01000011.1 3647 2397 -2 - 1251 Phosphoglycerate transport system transcriptional regulatory protein PgtA - none -
fig|6666666.229919.peg.39 CDS AZTY01000011.1 4236 3640 -3 - 597 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) - none -
fig|6666666.229919.peg.40 CDS AZTY01000011.1 4945 4193 -1 - 753 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) - none -
fig|6666666.229919.peg.41 CDS AZTY01000012.1 1167 352 -3 - 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229919.peg.42 CDS AZTY01000012.1 2201 1317 -2 - 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.229919.peg.43 CDS AZTY01000012.1 3443 2376 -2 - 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229919.peg.44 CDS AZTY01000012.1 4566 3448 -3 - 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229919.peg.45 CDS AZTY01000012.1 4703 6193 2 + 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229919.peg.46 CDS AZTY01000012.1 7399 6338 -1 - 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229919.peg.47 CDS AZTY01000012.1 8114 7386 -2 - 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229919.peg.48 CDS AZTY01000012.1 8957 8193 -2 - 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229919.peg.49 CDS AZTY01000012.1 9185 9964 2 + 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229919.peg.50 CDS AZTY01000013.1 420 1424 3 + 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229919.peg.51 CDS AZTY01000013.1 2155 1511 -1 - 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD
fig|6666666.229919.peg.52 CDS AZTY01000013.1 3457 2681 -1 - 777 Sodium-dependent transporter - none -
fig|6666666.229919.peg.53 CDS AZTY01000013.1 4182 3451 -3 - 732 Sodium-dependent transporter - none -
fig|6666666.229919.peg.54 CDS AZTY01000013.1 4601 4876 2 + 276 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229919.peg.55 CDS AZTY01000013.1 4878 5594 3 + 717 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229919.peg.56 CDS AZTY01000015.1 120 584 3 + 465 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229919.peg.57 CDS AZTY01000015.1 591 1211 3 + 621 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229919.peg.58 CDS AZTY01000015.1 1204 1989 1 + 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229919.peg.59 CDS AZTY01000015.1 2136 2771 3 + 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229919.peg.60 CDS AZTY01000015.1 2796 4169 3 + 1374 sodium-dependent transporter - none -
fig|6666666.229919.peg.61 CDS AZTY01000015.1 5348 4545 -2 - 804 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229919.peg.62 CDS AZTY01000015.1 6133 5360 -1 - 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229919.peg.63 CDS AZTY01000015.1 6321 7853 3 + 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229919.peg.64 CDS AZTY01000015.1 7956 7819 -3 - 138 hypothetical protein - none -
fig|6666666.229919.peg.65 CDS AZTY01000015.1 8718 7960 -3 - 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229919.peg.66 CDS AZTY01000015.1 9653 8730 -2 - 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229919.peg.67 CDS AZTY01000015.1 10626 9661 -3 - 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229919.peg.68 CDS AZTY01000015.1 11585 10686 -2 - 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229919.peg.69 CDS AZTY01000015.1 11815 13791 1 + 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229919.peg.70 CDS AZTY01000015.1 14904 13987 -3 - 918 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229919.peg.71 CDS AZTY01000015.1 15276 15674 3 + 399 Protein co-occuring with molybdenum cofactor biosynthesis protein B Molybdenum cofactor biosynthesis
fig|6666666.229919.peg.72 CDS AZTY01000015.1 15829 16074 1 + 246 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229919.peg.73 CDS AZTY01000015.1 16043 16489 2 + 447 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229919.peg.74 CDS AZTY01000015.1 16476 16886 3 + 411 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229919.peg.75 CDS AZTY01000016.1 62 373 2 + 312 hypothetical protein - none -
fig|6666666.229919.peg.76 CDS AZTY01000016.1 384 1016 3 + 633 hypothetical protein - none -
fig|6666666.229919.peg.77 CDS AZTY01000016.1 998 3289 2 + 2292 hypothetical protein - none -
fig|6666666.229919.peg.78 CDS AZTY01000016.1 3616 4485 1 + 870 hypothetical protein - none -
fig|6666666.229919.peg.79 CDS AZTY01000017.1 363 563 3 + 201 Mobile element protein - none -
fig|6666666.229919.peg.80 CDS AZTY01000017.1 818 967 2 + 150 hypothetical protein - none -
fig|6666666.229919.peg.81 CDS AZTY01000017.1 1344 1502 3 + 159 hypothetical protein - none -
fig|6666666.229919.peg.82 CDS AZTY01000017.1 1924 1658 -1 - 267 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229919.peg.83 CDS AZTY01000018.1 2260 8 -1 - 2253 DNA internalization-related competence protein ComEC/Rec2 KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.84 CDS AZTY01000018.1 2735 3172 2 + 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229919.peg.85 CDS AZTY01000019.1 14 316 2 + 303 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) tRNA modification Bacteria
fig|6666666.229919.peg.86 CDS AZTY01000019.1 1496 360 -2 - 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229919.peg.87 CDS AZTY01000020.1 48 326 3 + 279 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229919.peg.88 CDS AZTY01000020.1 1449 373 -3 - 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229919.peg.89 CDS AZTY01000020.1 2553 1453 -3 - 1101 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229919.peg.90 CDS AZTY01000020.1 3925 2564 -1 - 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229919.peg.91 CDS AZTY01000020.1 4011 4148 3 + 138 hypothetical protein - none -
fig|6666666.229919.peg.92 CDS AZTY01000020.1 4343 4477 2 + 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229919.peg.93 CDS AZTY01000020.1 4523 4858 2 + 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229919.peg.94 CDS AZTY01000020.1 4813 5076 1 + 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229919.peg.95 CDS AZTY01000020.1 5097 6707 3 + 1611 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229919.peg.96 CDS AZTY01000020.1 6836 8191 2 + 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229919.peg.97 CDS AZTY01000020.1 9203 8295 -2 - 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases;
tRNA modification Archaea
fig|6666666.229919.peg.98 CDS AZTY01000020.1 9880 9200 -1 - 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229919.peg.99 CDS AZTY01000020.1 10909 9887 -1 - 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229919.peg.100 CDS AZTY01000020.1 12542 10920 -2 - 1623 Translation elongation factor LepA Universal GTPases
fig|6666666.229919.peg.101 CDS AZTY01000021.1 2318 1329 -2 - 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229919.peg.102 CDS AZTY01000021.1 4134 2449 -3 - 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229919.peg.103 CDS AZTY01000021.1 5216 4410 -2 - 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229919.peg.104 CDS AZTY01000021.1 6412 5219 -1 - 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229919.peg.105 CDS AZTY01000021.1 7159 6422 -1 - 738 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229919.peg.106 CDS AZTY01000021.1 7160 7372 2 + 213 hypothetical protein - none -
fig|6666666.229919.peg.107 CDS AZTY01000022.1 2269 3309 1 + 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229919.peg.108 CDS AZTY01000022.1 3627 3956 3 + 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229919.peg.109 CDS AZTY01000022.1 4079 3966 -2 - 114 hypothetical protein - none -
fig|6666666.229919.peg.110 CDS AZTY01000022.1 4081 4533 1 + 453 putative membrane protein - none -
fig|6666666.229919.peg.111 CDS AZTY01000022.1 4534 4923 1 + 390 COG2363 - none -
fig|6666666.229919.peg.112 CDS AZTY01000023.1 15 317 3 + 303 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Archaea
fig|6666666.229919.peg.113 CDS AZTY01000023.1 314 694 2 + 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229919.peg.114 CDS AZTY01000023.1 2166 736 -3 - 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229919.peg.115 CDS AZTY01000023.1 2280 3215 3 + 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.116 CDS AZTY01000023.1 3836 3273 -2 - 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229919.peg.117 CDS AZTY01000023.1 4447 3836 -1 - 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229919.peg.118 CDS AZTY01000023.1 4902 4456 -3 - 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229919.peg.119 CDS AZTY01000023.1 5852 4926 -2 - 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229919.peg.120 CDS AZTY01000023.1 7195 6374 -1 - 822 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229919.peg.121 CDS AZTY01000023.1 8195 7968 -2 - 228 hypothetical protein - none -
fig|6666666.229919.peg.122 CDS AZTY01000023.1 8997 10379 3 + 1383 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229919.peg.123 CDS AZTY01000023.1 11624 10386 -2 - 1239 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229919.peg.124 CDS AZTY01000023.1 12773 11691 -2 - 1083 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229919.peg.125 CDS AZTY01000023.1 13379 12774 -2 - 606 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229919.peg.126 CDS AZTY01000023.1 13544 13422 -2 - 123 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229919.peg.127 CDS AZTY01000024.1 43 1263 1 + 1221 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229919.peg.128 CDS AZTY01000024.1 1365 1252 -3 - 114 hypothetical protein - none -
fig|6666666.229919.peg.129 CDS AZTY01000024.1 1343 1732 2 + 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229919.peg.130 CDS AZTY01000024.1 5053 2171 -1 - 2883 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229919.peg.131 CDS AZTY01000024.1 5297 5419 2 + 123 hypothetical protein - none -
fig|6666666.229919.peg.132 CDS AZTY01000024.1 5529 6488 3 + 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229919.peg.133 CDS AZTY01000024.1 7010 6687 -2 - 324 Thioredoxin - none -
fig|6666666.229919.peg.134 CDS AZTY01000024.1 8105 7110 -2 - 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate
fig|6666666.229919.peg.135 CDS AZTY01000024.1 8869 8129 -1 - 741 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229919.peg.136 CDS AZTY01000025.1 1082 804 -2 - 279 Tfp pilus assembly protein, pilus retraction ATPase PilT - none -
fig|6666666.229919.peg.137 CDS AZTY01000025.1 1160 1342 2 + 183 hypothetical protein - none -
fig|6666666.229919.peg.138 CDS AZTY01000025.1 2331 2453 3 + 123 hypothetical protein - none -
fig|6666666.229919.peg.139 CDS AZTY01000026.1 125 1039 2 + 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229919.peg.140 CDS AZTY01000026.1 1204 2250 1 + 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229919.peg.141 CDS AZTY01000026.1 2739 2311 -3 - 429 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.229919.peg.142 CDS AZTY01000026.1 4154 2781 -2 - 1374 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229919.peg.143 CDS AZTY01000026.1 5040 4171 -3 - 870 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229919.peg.144 CDS AZTY01000026.1 6597 5056 -3 - 1542 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229919.peg.145 CDS AZTY01000026.1 7158 6610 -3 - 549 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229919.peg.146 CDS AZTY01000026.1 7642 7172 -1 - 471 ATP synthase F0 sector subunit b - none -
fig|6666666.229919.peg.147 CDS AZTY01000026.1 7946 7692 -2 - 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) - none -
fig|6666666.229919.peg.148 CDS AZTY01000026.1 8786 7998 -2 - 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229919.peg.149 CDS AZTY01000026.1 9188 8811 -2 - 378 FIG048548: ATP synthase protein I2 - none -
fig|6666666.229919.peg.150 CDS AZTY01000026.1 9983 9300 -2 - 684 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229919.peg.151 CDS AZTY01000026.1 10446 9976 -3 - 471 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229919.peg.152 CDS AZTY01000026.1 10490 10660 2 + 171 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229919.peg.153 CDS AZTY01000026.1 10645 11346 1 + 702 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229919.peg.154 CDS AZTY01000026.1 11500 11616 1 + 117 hypothetical protein - none -
fig|6666666.229919.peg.155 CDS AZTY01000026.1 12718 11618 -1 - 1101 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229919.peg.156 CDS AZTY01000027.1 48 620 3 + 573 ABC transporter ATP-binding protein - none -
fig|6666666.229919.peg.157 CDS AZTY01000027.1 715 1017 1 + 303 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229919.peg.158 CDS AZTY01000028.1 1 600 1 + 600 Type II secretory pathway, component PulJ - none -
fig|6666666.229919.peg.159 CDS AZTY01000028.1 597 1292 3 + 696 FIG00696574: hypothetical protein - none -
fig|6666666.229919.peg.160 CDS AZTY01000028.1 1267 1569 1 + 303 FIG00696353: hypothetical protein - none -
fig|6666666.229919.peg.161 CDS AZTY01000028.1 1615 5004 1 + 3390 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229919.peg.162 CDS AZTY01000028.1 5449 5006 -1 - 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Ribosome biogenesis bacterial
fig|6666666.229919.peg.163 CDS AZTY01000028.1 5908 5459 -1 - 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229919.peg.164 CDS AZTY01000028.1 5964 6968 3 + 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229919.peg.165 CDS AZTY01000028.1 7055 7204 2 + 150 hypothetical protein - none -
fig|6666666.229919.peg.166 CDS AZTY01000028.1 7207 7347 1 + 141 hypothetical protein - none -
fig|6666666.229919.peg.167 CDS AZTY01000028.1 7584 8126 3 + 543 hypothetical protein - none -
fig|6666666.229919.peg.168 CDS AZTY01000028.1 8261 9523 2 + 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) Glycine Biosynthesis;
Serine Biosynthesis
fig|6666666.229919.peg.169 CDS AZTY01000028.1 10630 11136 1 + 507 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229919.peg.170 CDS AZTY01000028.1 11149 14316 1 + 3168 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229919.peg.171 CDS AZTY01000028.1 14385 16508 3 + 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229919.peg.172 CDS AZTY01000028.1 16523 17956 2 + 1434 Microcin H47 secretion protein - none -
fig|6666666.229919.peg.173 CDS AZTY01000028.1 18367 20247 1 + 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229919.peg.174 CDS AZTY01000029.1 31 666 1 + 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229919.peg.175 CDS AZTY01000029.1 671 1336 2 + 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229919.peg.176 CDS AZTY01000029.1 1347 2084 3 + 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229919.peg.177 CDS AZTY01000029.1 2135 2308 2 + 174 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229919.peg.178 CDS AZTY01000029.1 2305 2823 1 + 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229919.peg.179 CDS AZTY01000029.1 2823 4781 3 + 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229919.peg.180 CDS AZTY01000029.1 4810 5355 1 + 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229919.peg.181 CDS AZTY01000029.1 5355 5906 3 + 552 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229919.peg.182 CDS AZTY01000029.1 5906 6829 2 + 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229919.peg.183 CDS AZTY01000029.1 6961 7587 1 + 627 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229919.peg.184 CDS AZTY01000029.1 7605 7895 3 + 291 hypothetical protein - none -
fig|6666666.229919.peg.185 CDS AZTY01000029.1 8472 9995 3 + 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229919.peg.186 CDS AZTY01000029.1 10069 10734 1 + 666 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229919.peg.187 CDS AZTY01000029.1 10731 11408 3 + 678 NrfC protein - none -
fig|6666666.229919.peg.188 CDS AZTY01000029.1 11405 12370 2 + 966 NrfD protein - none -
fig|6666666.229919.peg.189 CDS AZTY01000029.1 12820 12602 -1 - 219 hypothetical protein - none -
fig|6666666.229919.peg.190 CDS AZTY01000029.1 12959 14869 2 + 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229919.peg.191 CDS AZTY01000029.1 14862 15392 3 + 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229919.peg.192 CDS AZTY01000030.1 2076 1522 -3 - 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.193 CDS AZTY01000030.1 3011 2076 -2 - 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.194 CDS AZTY01000030.1 3694 4569 1 + 876 Probable protease htpX homolog - none -
fig|6666666.229919.peg.195 CDS AZTY01000031.1 1283 2014 2 + 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229919.peg.196 CDS AZTY01000031.1 3349 2135 -1 - 1215 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229919.peg.197 CDS AZTY01000031.1 3466 4770 1 + 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229919.peg.198 CDS AZTY01000032.1 56 565 2 + 510 Mobile element protein - none -
fig|6666666.229919.peg.199 CDS AZTY01000033.1 1467 121 -3 - 1347 FIG00849539: hypothetical protein - none -
fig|6666666.229919.peg.200 CDS AZTY01000033.1 1862 1605 -2 - 258 protein of unknown function UPF0153 - none -
fig|6666666.229919.peg.201 CDS AZTY01000033.1 3514 1859 -1 - 1656 FIG00698381: hypothetical protein - none -
fig|6666666.229919.peg.202 CDS AZTY01000033.1 4634 3561 -2 - 1074 FIG00697578: hypothetical protein - none -
fig|6666666.229919.peg.203 CDS AZTY01000033.1 4930 4646 -1 - 285 hypothetical protein - none -
fig|6666666.229919.peg.204 CDS AZTY01000033.1 5961 5071 -3 - 891 transcriptional regulator, putative - none -
fig|6666666.229919.peg.205 CDS AZTY01000033.1 6358 6245 -1 - 114 hypothetical protein - none -
fig|6666666.229919.peg.206 CDS AZTY01000033.1 7868 6480 -2 - 1389 Putative protease - none -
fig|6666666.229919.peg.207 CDS AZTY01000033.1 8396 8040 -2 - 357 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229919.peg.208 CDS AZTY01000033.1 8824 9162 1 + 339 conserved hypothetical protein - none -
fig|6666666.229919.peg.209 CDS AZTY01000033.1 9514 9224 -1 - 291 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229919.peg.210 CDS AZTY01000033.1 9758 9504 -2 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229919.peg.211 CDS AZTY01000036.1 1460 285 -2 - 1176 hypothetical protein - none -
fig|6666666.229919.peg.212 CDS AZTY01000037.1 62 391 2 + 330 hypothetical protein - none -
fig|6666666.229919.peg.213 CDS AZTY01000037.1 620 3346 2 + 2727 hypothetical protein - none -
fig|6666666.229919.peg.214 CDS AZTY01000038.1 58 237 1 + 180 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229919.peg.215 CDS AZTY01000038.1 545 420 -2 - 126 hypothetical protein - none -
fig|6666666.229919.peg.216 CDS AZTY01000038.1 615 1733 3 + 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229919.peg.217 CDS AZTY01000038.1 1733 2503 2 + 771 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway - none -
fig|6666666.229919.peg.218 CDS AZTY01000038.1 2603 3622 2 + 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229919.peg.219 CDS AZTY01000038.1 3750 4562 3 + 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229919.peg.220 CDS AZTY01000038.1 5517 5101 -3 - 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229919.peg.221 CDS AZTY01000038.1 5638 6018 1 + 381 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229919.peg.222 CDS AZTY01000038.1 6011 6304 2 + 294 UPF0125 protein yfjF - none -
fig|6666666.229919.peg.223 CDS AZTY01000038.1 6337 7530 1 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229919.peg.224 CDS AZTY01000038.1 7537 8871 1 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229919.peg.225 CDS AZTY01000038.1 9731 8877 -2 - 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229919.peg.226 CDS AZTY01000038.1 10292 9759 -2 - 534 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229919.peg.227 CDS AZTY01000038.1 11021 10296 -2 - 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.228 CDS AZTY01000038.1 11545 11027 -1 - 519 LptA, protein essential for LPS transport across the periplasm KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.229 CDS AZTY01000038.1 12101 11526 -2 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters - none -
fig|6666666.229919.peg.230 CDS AZTY01000038.1 12214 12098 -1 - 117 hypothetical protein - none -
fig|6666666.229919.peg.231 CDS AZTY01000038.1 12384 13181 3 + 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301
fig|6666666.229919.peg.232 CDS AZTY01000038.1 13175 13960 2 + 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301
fig|6666666.229919.peg.233 CDS AZTY01000038.1 13983 14492 3 + 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301
fig|6666666.229919.peg.234 CDS AZTY01000038.1 14521 15162 1 + 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301
fig|6666666.229919.peg.235 CDS AZTY01000038.1 15256 15525 1 + 270 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229919.peg.236 CDS AZTY01000038.1 15525 15782 3 + 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229919.peg.237 CDS AZTY01000038.1 15799 17076 1 + 1278 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229919.peg.238 CDS AZTY01000038.1 17428 17138 -1 - 291 FIG00696346: hypothetical protein - none -
fig|6666666.229919.peg.239 CDS AZTY01000038.1 17632 19062 1 + 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229919.peg.240 CDS AZTY01000038.1 19139 19678 2 + 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229919.peg.241 CDS AZTY01000038.1 19675 20343 1 + 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229919.peg.242 CDS AZTY01000038.1 20408 21133 2 + 726 Integral membrane protein TerC - none -
fig|6666666.229919.peg.243 CDS AZTY01000038.1 22651 21242 -1 - 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229919.peg.244 CDS AZTY01000038.1 23038 24891 1 + 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229919.peg.245 CDS AZTY01000038.1 25001 24888 -2 - 114 hypothetical protein - none -
fig|6666666.229919.peg.246 CDS AZTY01000038.1 25117 27897 1 + 2781 TolA protein Ton and Tol transport systems
fig|6666666.229919.peg.247 CDS AZTY01000038.1 28425 27961 -3 - 465 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229919.peg.248 CDS AZTY01000038.1 28583 29476 2 + 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229919.peg.249 CDS AZTY01000038.1 29589 30593 3 + 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor - none -
fig|6666666.229919.peg.250 CDS AZTY01000039.1 48 473 3 + 426 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229919.peg.251 CDS AZTY01000039.1 788 1624 2 + 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229919.peg.252 CDS AZTY01000039.1 2372 1677 -2 - 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229919.peg.253 CDS AZTY01000039.1 3753 2365 -3 - 1389 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229919.peg.254 CDS AZTY01000039.1 3892 4023 1 + 132 hypothetical protein - none -
fig|6666666.229919.peg.255 CDS AZTY01000040.1 38 982 2 + 945 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229919.peg.256 CDS AZTY01000040.1 997 2187 1 + 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229919.peg.257 CDS AZTY01000040.1 2227 3291 1 + 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229919.peg.258 CDS AZTY01000040.1 3362 4792 2 + 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229919.peg.259 CDS AZTY01000040.1 4805 5734 2 + 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229919.peg.260 CDS AZTY01000040.1 5731 6498 1 + 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229919.peg.261 CDS AZTY01000040.1 6523 7803 1 + 1281 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229919.peg.262 CDS AZTY01000040.1 7887 9167 3 + 1281 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229919.peg.263 CDS AZTY01000040.1 9205 10122 1 + 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.264 CDS AZTY01000040.1 10204 11481 1 + 1278 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229919.peg.265 CDS AZTY01000040.1 11615 13495 2 + 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229919.peg.266 CDS AZTY01000040.1 13561 13905 1 + 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis
fig|6666666.229919.peg.267 CDS AZTY01000040.1 14042 15175 2 + 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229919.peg.268 CDS AZTY01000041.1 1771 719 -1 - 1053 Peptide transport system ATP-binding protein SapD - none -
fig|6666666.229919.peg.269 CDS AZTY01000041.1 2666 1779 -2 - 888 Peptide transport system permease protein SapC - none -
fig|6666666.229919.peg.270 CDS AZTY01000041.1 3621 2656 -3 - 966 Peptide transport system permease protein SapB - none -
fig|6666666.229919.peg.271 CDS AZTY01000041.1 5252 3621 -2 - 1632 Peptide transport periplasmic protein SapA - none -
fig|6666666.229919.peg.272 CDS AZTY01000041.1 5518 6933 1 + 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229919.peg.273 CDS AZTY01000041.1 6946 8025 1 + 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229919.peg.274 CDS AZTY01000041.1 8109 9068 3 + 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229919.peg.275 CDS AZTY01000041.1 9431 9123 -2 - 309 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229919.peg.276 CDS AZTY01000041.1 9742 9446 -1 - 297 RNA-binding protein Hfq Hfl operon
fig|6666666.229919.peg.277 CDS AZTY01000041.1 10806 9862 -3 - 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229919.peg.278 CDS AZTY01000041.1 12416 10821 -2 - 1596 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229919.peg.279 CDS AZTY01000042.1 2393 1350 -2 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229919.peg.280 CDS AZTY01000042.1 3540 2413 -3 - 1128 Fic family protein - none -
fig|6666666.229919.peg.281 CDS AZTY01000042.1 4636 3710 -1 - 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229919.peg.282 CDS AZTY01000042.1 4658 4777 2 + 120 hypothetical protein - none -
fig|6666666.229919.peg.283 CDS AZTY01000042.1 4915 5691 1 + 777 Protein HI0205 precursor - none -
fig|6666666.229919.peg.284 CDS AZTY01000042.1 5718 7532 3 + 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229919.peg.285 CDS AZTY01000043.1 2460 499 -3 - 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229919.peg.286 CDS AZTY01000043.1 2940 2473 -3 - 468 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229919.peg.287 CDS AZTY01000043.1 3308 3000 -2 - 309 Iojap protein - none -
fig|6666666.229919.peg.288 CDS AZTY01000043.1 4703 3375 -2 - 1329 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229919.peg.289 CDS AZTY01000043.1 4956 6194 3 + 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229919.peg.290 CDS AZTY01000043.1 7554 6319 -3 - 1236 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229919.peg.291 CDS AZTY01000043.1 7634 7774 2 + 141 hypothetical protein - none -
fig|6666666.229919.peg.292 CDS AZTY01000043.1 8013 7783 -3 - 231 Acyl carrier protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.293 CDS AZTY01000043.1 9014 8286 -2 - 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) - none -
fig|6666666.229919.peg.294 CDS AZTY01000043.1 9977 9039 -2 - 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) - none -
fig|6666666.229919.peg.295 CDS AZTY01000043.1 11034 10084 -3 - 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) - none -
fig|6666666.229919.peg.296 CDS AZTY01000043.1 12100 11081 -1 - 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.297 CDS AZTY01000043.1 12297 12127 -3 - 171 LSU ribosomal protein L32p - none -
fig|6666666.229919.peg.298 CDS AZTY01000043.1 12838 12314 -1 - 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229919.peg.299 CDS AZTY01000043.1 13551 12910 -3 - 642 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229919.peg.300 CDS AZTY01000043.1 14315 13551 -2 - 765 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229919.peg.301 CDS AZTY01000043.1 14959 14309 -1 - 651 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229919.peg.302 CDS AZTY01000043.1 16115 14940 -2 - 1176 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229919.peg.303 CDS AZTY01000043.1 17397 16108 -3 - 1290 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229919.peg.304 CDS AZTY01000043.1 17620 18489 1 + 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.305 CDS AZTY01000043.1 18515 19147 2 + 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229919.peg.306 CDS AZTY01000043.1 19871 19212 -2 - 660 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229919.peg.307 CDS AZTY01000043.1 20031 19852 -3 - 180 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229919.peg.308 CDS AZTY01000044.1 13 291 1 + 279 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229919.peg.309 CDS AZTY01000044.1 542 1474 2 + 933 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.229919.peg.310 CDS AZTY01000044.1 1686 1558 -3 - 129 hypothetical protein - none -
fig|6666666.229919.peg.311 CDS AZTY01000044.1 2468 1683 -2 - 786 serine/threonine protein kinase - none -
fig|6666666.229919.peg.312 CDS AZTY01000044.1 3010 2489 -1 - 522 unknown - none -
fig|6666666.229919.peg.313 CDS AZTY01000044.1 3212 3538 2 + 327 Putative lipoprotein yceB precursor - none -
fig|6666666.229919.peg.314 CDS AZTY01000044.1 3561 3797 3 + 237 Putative lipoprotein yceB precursor - none -
fig|6666666.229919.peg.315 CDS AZTY01000044.1 4291 3854 -1 - 438 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229919.peg.316 CDS AZTY01000045.1 1414 623 -1 - 792 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229919.peg.317 CDS AZTY01000045.1 2640 1573 -3 - 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229919.peg.318 CDS AZTY01000045.1 5002 3692 -1 - 1311 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229919.peg.319 CDS AZTY01000045.1 6035 5010 -2 - 1026 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) Mannose Metabolism
fig|6666666.229919.peg.320 CDS AZTY01000045.1 7150 6032 -1 - 1119 Glycosyltransferase - none -
fig|6666666.229919.peg.321 CDS AZTY01000045.1 8440 7262 -1 - 1179 Glycosyltransferase - none -
fig|6666666.229919.peg.322 CDS AZTY01000045.1 9689 8409 -2 - 1281 hypothetical protein - none -
fig|6666666.229919.peg.323 CDS AZTY01000045.1 10691 9726 -2 - 966 glycosyl transferase family 2 - none -
fig|6666666.229919.peg.324 CDS AZTY01000046.1 665 1678 2 + 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229919.peg.325 CDS AZTY01000046.1 1893 2885 3 + 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229919.peg.326 CDS AZTY01000046.1 2960 3439 2 + 480 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229919.peg.327 CDS AZTY01000046.1 3446 4528 2 + 1083 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229919.peg.328 CDS AZTY01000046.1 4506 5516 3 + 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229919.peg.329 CDS AZTY01000046.1 7438 5591 -1 - 1848 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229919.peg.330 CDS AZTY01000046.1 8799 7579 -3 - 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) - none -
fig|6666666.229919.peg.331 CDS AZTY01000046.1 8969 10987 2 + 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229919.peg.332 CDS AZTY01000046.1 11177 14248 2 + 3072 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229919.peg.333 CDS AZTY01000046.1 14936 14358 -2 - 579 Heat shock protein GrpE GroEL GroES;
Protein chaperones
fig|6666666.229919.peg.334 CDS AZTY01000046.1 14904 15032 3 + 129 hypothetical protein - none -
fig|6666666.229919.peg.335 CDS AZTY01000046.1 15077 15994 2 + 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229919.peg.336 CDS AZTY01000046.1 16068 17744 3 + 1677 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229919.peg.337 CDS AZTY01000046.1 18459 17812 -3 - 648 Outer membrane protein W precursor - none -
fig|6666666.229919.peg.338 CDS AZTY01000046.1 18732 19490 3 + 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229919.peg.339 CDS AZTY01000046.1 19496 20047 2 + 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229919.peg.340 CDS AZTY01000046.1 20051 20521 2 + 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229919.peg.341 CDS AZTY01000046.1 20524 20820 1 + 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229919.peg.342 CDS AZTY01000047.1 68 1150 2 + 1083 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229919.peg.343 CDS AZTY01000047.1 1320 2147 3 + 828 Dihydropteroate synthase (EC 2.5.1.15) Folate biosynthesis cluster
fig|6666666.229919.peg.344 CDS AZTY01000047.1 2175 3512 3 + 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229919.peg.345 CDS AZTY01000047.1 3525 3992 3 + 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229919.peg.346 CDS AZTY01000047.1 4216 4761 1 + 546 FIG00696317: hypothetical protein - none -
fig|6666666.229919.peg.347 CDS AZTY01000047.1 5445 4783 -3 - 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229919.peg.348 CDS AZTY01000047.1 5529 5780 3 + 252 Protein YcgL - none -
fig|6666666.229919.peg.349 CDS AZTY01000047.1 6687 6178 -3 - 510 probable lipoprotein NlpC - none -
fig|6666666.229919.peg.350 CDS AZTY01000047.1 7721 6867 -2 - 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.351 CDS AZTY01000047.1 8138 7731 -2 - 408 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 - none -
fig|6666666.229919.peg.352 CDS AZTY01000048.1 29 889 2 + 861 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229919.peg.353 CDS AZTY01000048.1 898 1677 1 + 780 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229919.peg.354 CDS AZTY01000049.1 3306 2302 -3 - 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229919.peg.355 CDS AZTY01000049.1 3477 4187 3 + 711 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229919.peg.356 CDS AZTY01000049.1 4254 4520 3 + 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229919.peg.357 CDS AZTY01000049.1 4566 6689 3 + 2124 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229919.peg.358 CDS AZTY01000049.1 6691 8772 1 + 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229919.peg.359 CDS AZTY01000049.1 8765 9259 2 + 495 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229919.peg.360 CDS AZTY01000049.1 9293 10120 2 + 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229919.peg.361 CDS AZTY01000050.1 81 284 3 + 204 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229919.peg.362 CDS AZTY01000050.1 2195 351 -2 - 1845 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229919.peg.363 CDS AZTY01000051.1 2148 694 -3 - 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229919.peg.364 CDS AZTY01000051.1 3987 2638 -3 - 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229919.peg.365 CDS AZTY01000051.1 5659 4289 -1 - 1371 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229919.peg.366 CDS AZTY01000051.1 6560 5772 -2 - 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229919.peg.367 CDS AZTY01000051.1 7034 8479 2 + 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis
fig|6666666.229919.peg.368 CDS AZTY01000051.1 8925 9134 3 + 210 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.229919.peg.369 CDS AZTY01000051.1 10165 9233 -1 - 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229919.peg.370 CDS AZTY01000051.1 11119 10247 -1 - 873 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229919.peg.371 CDS AZTY01000051.1 12106 11141 -1 - 966 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229919.peg.372 CDS AZTY01000051.1 13611 12103 -3 - 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229919.peg.373 CDS AZTY01000051.1 14041 13622 -1 - 420 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229919.peg.374 CDS AZTY01000051.1 14261 14860 2 + 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229919.peg.375 CDS AZTY01000053.1 381 1565 3 + 1185 Lipoprotein releasing system transmembrane protein LolC Lipoprotein sorting system
fig|6666666.229919.peg.376 CDS AZTY01000053.1 1580 2266 2 + 687 Lipoprotein releasing system ATP-binding protein LolD Lipoprotein sorting system
fig|6666666.229919.peg.377 CDS AZTY01000054.1 16 828 1 + 813 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229919.peg.378 CDS AZTY01000054.1 3167 1434 -2 - 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229919.peg.379 CDS AZTY01000054.1 3264 3851 3 + 588 Protein yecM - none -
fig|6666666.229919.peg.380 CDS AZTY01000054.1 3893 4348 2 + 456 Outer membrane lipoprotein - none -
fig|6666666.229919.peg.381 CDS AZTY01000055.1 20 259 2 + 240 FIG050068: DNA-binding protein - none -
fig|6666666.229919.peg.382 CDS AZTY01000055.1 1460 369 -2 - 1092 Integrase - none -
fig|6666666.229919.peg.383 CDS AZTY01000055.1 1996 2355 1 + 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229919.peg.384 CDS AZTY01000055.1 2355 3047 3 + 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229919.peg.385 CDS AZTY01000055.1 3049 4401 1 + 1353 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.229919.peg.386 CDS AZTY01000055.1 4731 4438 -3 - 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229919.peg.387 CDS AZTY01000055.1 5035 4733 -1 - 303 FIG022160: hypothetical toxin - none -
fig|6666666.229919.peg.388 CDS AZTY01000055.1 5194 5075 -1 - 120 hypothetical protein - none -
fig|6666666.229919.peg.389 CDS AZTY01000055.1 5188 7134 1 + 1947 ABC transporter ATP-binding protein - none -
fig|6666666.229919.peg.390 CDS AZTY01000057.1 116 475 2 + 360 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229919.peg.391 CDS AZTY01000057.1 488 1072 2 + 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229919.peg.392 CDS AZTY01000057.1 1137 1724 3 + 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229919.peg.393 CDS AZTY01000057.1 2522 1830 -2 - 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229919.peg.394 CDS AZTY01000057.1 2739 3809 3 + 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229919.peg.395 CDS AZTY01000057.1 3813 4454 3 + 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229919.peg.396 CDS AZTY01000057.1 4469 4951 2 + 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229919.peg.397 CDS AZTY01000057.1 5283 5083 -3 - 201 Mobile element protein - none -
fig|6666666.229919.peg.398 CDS AZTY01000057.1 5442 5308 -3 - 135 Mobile element protein - none -
fig|6666666.229919.peg.399 CDS AZTY01000057.1 5652 5449 -3 - 204 Mobile element protein - none -
fig|6666666.229919.peg.400 CDS AZTY01000057.1 5780 5953 2 + 174 hypothetical protein - none -
fig|6666666.229919.peg.401 CDS AZTY01000057.1 6235 6089 -1 - 147 hypothetical protein - none -
fig|6666666.229919.peg.402 CDS AZTY01000058.1 270 386 3 + 117 hypothetical protein - none -
fig|6666666.229919.peg.403 CDS AZTY01000058.1 615 475 -3 - 141 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229919.peg.404 CDS AZTY01000058.1 1409 612 -2 - 798 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229919.peg.405 CDS AZTY01000058.1 1628 2446 2 + 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229919.peg.406 CDS AZTY01000058.1 3314 2484 -2 - 831 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229919.peg.407 CDS AZTY01000058.1 4542 3400 -3 - 1143 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229919.peg.408 CDS AZTY01000058.1 4576 4749 1 + 174 hypothetical protein - none -
fig|6666666.229919.peg.409 CDS AZTY01000058.1 5830 4751 -1 - 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) - none -
fig|6666666.229919.peg.410 CDS AZTY01000058.1 7058 5895 -2 - 1164 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway
fig|6666666.229919.peg.411 CDS AZTY01000058.1 7870 7175 -1 - 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229919.peg.412 CDS AZTY01000058.1 7977 8198 3 + 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229919.peg.413 CDS AZTY01000058.1 9071 8265 -2 - 807 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229919.peg.414 CDS AZTY01000059.1 95 847 2 + 753 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229919.peg.415 CDS AZTY01000060.1 4 987 1 + 984 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229919.peg.416 CDS AZTY01000060.1 989 1660 2 + 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229919.peg.417 CDS AZTY01000060.1 1650 2141 3 + 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229919.peg.418 CDS AZTY01000060.1 2148 2459 3 + 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229919.peg.419 CDS AZTY01000060.1 2660 3325 2 + 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229919.peg.420 CDS AZTY01000060.1 3503 3303 -2 - 201 hypothetical protein - none -
fig|6666666.229919.peg.421 CDS AZTY01000060.1 3655 4689 1 + 1035 ATPase domain protein - none -
fig|6666666.229919.peg.422 CDS AZTY01000060.1 8438 4776 -2 - 3663 HrpA-like helicases - none -
fig|6666666.229919.peg.423 CDS AZTY01000061.1 24 821 3 + 798 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550
fig|6666666.229919.peg.424 CDS AZTY01000061.1 1091 2680 2 + 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229919.peg.425 CDS AZTY01000061.1 2857 4194 1 + 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1
fig|6666666.229919.peg.426 CDS AZTY01000061.1 4878 4288 -3 - 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229919.peg.427 CDS AZTY01000061.1 5071 6129 1 + 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229919.peg.428 CDS AZTY01000061.1 6319 7143 1 + 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229919.peg.429 CDS AZTY01000061.1 7819 7208 -1 - 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229919.peg.430 CDS AZTY01000061.1 9449 8103 -2 - 1347 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229919.peg.431 CDS AZTY01000062.1 20 631 2 + 612 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.229919.peg.432 CDS AZTY01000062.1 851 3478 2 + 2628 Iron siderophore receptor protein - none -
fig|6666666.229919.peg.433 CDS AZTY01000062.1 3697 3557 -1 - 141 hypothetical protein - none -
fig|6666666.229919.peg.434 CDS AZTY01000062.1 3827 6448 2 + 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229919.peg.435 CDS AZTY01000062.1 7485 6532 -3 - 954 Inositol transport system permease protein - none -
fig|6666666.229919.peg.436 CDS AZTY01000062.1 9041 7536 -2 - 1506 Inositol transport system ATP-binding protein - none -
fig|6666666.229919.peg.437 CDS AZTY01000062.1 10042 9110 -1 - 933 Inositol transport system sugar-binding protein - none -
fig|6666666.229919.peg.438 CDS AZTY01000062.1 11064 10126 -3 - 939 Inositol transport system sugar-binding protein - none -
fig|6666666.229919.peg.439 CDS AZTY01000062.1 12505 11366 -1 - 1140 Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) - none -
fig|6666666.229919.peg.440 CDS AZTY01000062.1 12793 12596 -1 - 198 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) - none -
fig|6666666.229919.peg.441 CDS AZTY01000064.1 2 565 2 + 564 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229919.peg.442 CDS AZTY01000064.1 1441 560 -1 - 882 Protein rarD - none -
fig|6666666.229919.peg.443 CDS AZTY01000064.1 1659 1474 -3 - 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229919.peg.444 CDS AZTY01000064.1 2300 2599 2 + 300 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229919.peg.445 CDS AZTY01000064.1 2821 3195 1 + 375 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229919.peg.446 CDS AZTY01000064.1 3348 3818 3 + 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229919.peg.447 CDS AZTY01000064.1 3933 6035 3 + 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Universal GTPases
fig|6666666.229919.peg.448 CDS AZTY01000065.1 70 840 1 + 771 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229919.peg.449 CDS AZTY01000065.1 853 1797 1 + 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229919.peg.450 CDS AZTY01000065.1 1825 2265 1 + 441 hypothetical protein - none -
fig|6666666.229919.peg.451 CDS AZTY01000065.1 2321 3595 2 + 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229919.peg.452 CDS AZTY01000065.1 3654 4244 3 + 591 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) - none -
fig|6666666.229919.peg.453 CDS AZTY01000067.1 1416 1030 -3 - 387 Integral membrane protein - none -
fig|6666666.229919.peg.454 CDS AZTY01000067.1 1610 2626 2 + 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229919.peg.455 CDS AZTY01000067.1 2632 2973 1 + 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229919.peg.456 CDS AZTY01000067.1 2980 4269 1 + 1290 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229919.peg.457 CDS AZTY01000067.1 4402 5046 1 + 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229919.peg.458 CDS AZTY01000067.1 5133 5246 3 + 114 hypothetical protein - none -
fig|6666666.229919.peg.459 CDS AZTY01000067.1 6867 5494 -3 - 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229919.peg.460 CDS AZTY01000067.1 8024 6870 -2 - 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229919.peg.461 CDS AZTY01000067.1 8189 8869 2 + 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229919.peg.462 CDS AZTY01000067.1 8895 10160 3 + 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229919.peg.463 CDS AZTY01000067.1 10229 10840 2 + 612 SH3 domain protein - none -
fig|6666666.229919.peg.464 CDS AZTY01000067.1 10840 12117 1 + 1278 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.229919.peg.465 CDS AZTY01000068.1 4 1197 1 + 1194 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229919.peg.466 CDS AZTY01000068.1 1197 3176 3 + 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229919.peg.467 CDS AZTY01000068.1 3189 3785 3 + 597 hypothetical protein - none -
fig|6666666.229919.peg.468 CDS AZTY01000068.1 4027 4455 1 + 429 LSU ribosomal protein L13p (L13Ae) - none -
fig|6666666.229919.peg.469 CDS AZTY01000068.1 4472 4864 2 + 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229919.peg.470 CDS AZTY01000068.1 5025 5810 3 + 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229919.peg.471 CDS AZTY01000068.1 5969 5823 -2 - 147 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229919.peg.472 CDS AZTY01000068.1 6105 5953 -3 - 153 StbE replicon stabilization toxin - none -
fig|6666666.229919.peg.473 CDS AZTY01000068.1 6356 6102 -2 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229919.peg.474 CDS AZTY01000068.1 8028 6571 -3 - 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229919.peg.475 CDS AZTY01000069.1 968 630 -2 - 339 FIG00904093: hypothetical protein - none -
fig|6666666.229919.peg.476 CDS AZTY01000069.1 1144 2349 1 + 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229919.peg.477 CDS AZTY01000069.1 2445 4208 3 + 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229919.peg.478 CDS AZTY01000069.1 4378 4788 1 + 411 probable membrane protein YPO3565 - none -
fig|6666666.229919.peg.479 CDS AZTY01000069.1 4916 4746 -2 - 171 hypothetical protein - none -
fig|6666666.229919.peg.480 CDS AZTY01000069.1 4979 6361 2 + 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229919.peg.481 CDS AZTY01000069.1 7622 6552 -2 - 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229919.peg.482 CDS AZTY01000069.1 9891 7849 -3 - 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229919.peg.483 CDS AZTY01000069.1 11534 10503 -2 - 1032 putative membrane protein - none -
fig|6666666.229919.peg.484 CDS AZTY01000069.1 12214 11549 -1 - 666 putative exported protein - none -
fig|6666666.229919.peg.485 CDS AZTY01000069.1 12551 14263 2 + 1713 ABC transporter ATP-binding protein - none -
fig|6666666.229919.peg.486 CDS AZTY01000069.1 15254 14367 -2 - 888 putative adhesin/invasin - none -
fig|6666666.229919.peg.487 CDS AZTY01000070.1 82 924 1 + 843 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229919.peg.488 CDS AZTY01000070.1 946 1839 1 + 894 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229919.peg.489 CDS AZTY01000070.1 2015 2662 2 + 648 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229919.peg.490 CDS AZTY01000070.1 2725 4569 1 + 1845 hypothetical protein - none -
fig|6666666.229919.peg.491 CDS AZTY01000070.1 4617 5630 3 + 1014 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229919.peg.492 CDS AZTY01000070.1 5634 5927 3 + 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229919.peg.493 CDS AZTY01000070.1 8171 6624 -2 - 1548 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229919.peg.494 CDS AZTY01000071.1 25 891 1 + 867 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229919.peg.495 CDS AZTY01000071.1 1036 1686 1 + 651 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229919.peg.496 CDS AZTY01000071.1 1752 2456 3 + 705 hypothetical protein - none -
fig|6666666.229919.peg.497 CDS AZTY01000071.1 2780 2935 2 + 156 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229919.peg.498 CDS AZTY01000071.1 3893 4273 2 + 381 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229919.peg.499 CDS AZTY01000071.1 4295 5299 2 + 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229919.peg.500 CDS AZTY01000071.1 5308 6936 1 + 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229919.peg.501 CDS AZTY01000071.1 6920 7567 2 + 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229919.peg.502 CDS AZTY01000071.1 7613 8617 2 + 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229919.peg.503 CDS AZTY01000071.1 9219 9046 -3 - 174 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229919.peg.504 CDS AZTY01000071.1 9333 9812 3 + 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229919.peg.505 CDS AZTY01000071.1 9816 12560 3 + 2745 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.229919.peg.506 CDS AZTY01000072.1 2700 280 -3 - 2421 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229919.peg.507 CDS AZTY01000072.1 4686 2797 -3 - 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229919.peg.508 CDS AZTY01000072.1 4997 4683 -2 - 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229919.peg.509 CDS AZTY01000072.1 5120 5239 2 + 120 hypothetical protein - none -
fig|6666666.229919.peg.510 CDS AZTY01000072.1 5257 6507 1 + 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229919.peg.511 CDS AZTY01000072.1 7165 6560 -1 - 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229919.peg.512 CDS AZTY01000072.1 7366 7926 1 + 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.229919.peg.513 CDS AZTY01000072.1 7992 10334 3 + 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor - none -
fig|6666666.229919.peg.514 CDS AZTY01000072.1 10888 10424 -1 - 465 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229919.peg.515 CDS AZTY01000073.1 19 168 1 + 150 Probable phospholipase protein - none -
fig|6666666.229919.peg.516 CDS AZTY01000073.1 168 926 3 + 759 miscellaneous; hypothetical/partial homology - none -
fig|6666666.229919.peg.517 CDS AZTY01000074.1 1987 644 -1 - 1344 putative hexose phosphate transport protein - none -
fig|6666666.229919.peg.518 CDS AZTY01000074.1 2808 2005 -3 - 804 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229919.peg.519 CDS AZTY01000074.1 3072 3902 3 + 831 5-deoxy-glucuronate isomerase (EC 5.3.1.-) - none -
fig|6666666.229919.peg.520 CDS AZTY01000074.1 4788 4669 -3 - 120 hypothetical protein - none -
fig|6666666.229919.peg.521 CDS AZTY01000075.1 2676 412 -3 - 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229919.peg.522 CDS AZTY01000075.1 2824 2669 -1 - 156 hypothetical protein - none -
fig|6666666.229919.peg.523 CDS AZTY01000075.1 3163 3297 1 + 135 hypothetical protein - none -
fig|6666666.229919.peg.524 CDS AZTY01000075.1 3764 3285 -2 - 480 hypothetical protein - none -
fig|6666666.229919.peg.525 CDS AZTY01000075.1 5337 4276 -3 - 1062 hypothetical protein - none -
fig|6666666.229919.peg.526 CDS AZTY01000075.1 6089 5334 -2 - 756 hypothetical protein - none -
fig|6666666.229919.peg.527 CDS AZTY01000075.1 7368 6091 -3 - 1278 hypothetical protein - none -
fig|6666666.229919.peg.528 CDS AZTY01000075.1 8746 7358 -1 - 1389 hypothetical protein - none -
fig|6666666.229919.peg.529 CDS AZTY01000076.1 18 590 3 + 573 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229919.peg.530 CDS AZTY01000076.1 568 846 1 + 279 FIG001341: Probable Fe(2+)-trafficking protein YggX - none -
fig|6666666.229919.peg.531 CDS AZTY01000076.1 849 1928 3 + 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229919.peg.532 CDS AZTY01000076.1 2323 2448 1 + 126 hypothetical protein - none -
fig|6666666.229919.peg.533 CDS AZTY01000076.1 3022 2429 -1 - 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229919.peg.534 CDS AZTY01000076.1 3126 3437 3 + 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229919.peg.535 CDS AZTY01000076.1 3447 3563 3 + 117 hypothetical protein - none -
fig|6666666.229919.peg.536 CDS AZTY01000076.1 3601 3768 1 + 168 hypothetical protein - none -
fig|6666666.229919.peg.537 CDS AZTY01000076.1 3793 5133 1 + 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229919.peg.538 CDS AZTY01000076.1 5136 6371 3 + 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229919.peg.539 CDS AZTY01000076.1 6364 7149 1 + 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229919.peg.540 CDS AZTY01000076.1 7149 7778 3 + 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229919.peg.541 CDS AZTY01000076.1 7782 8378 3 + 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229919.peg.542 CDS AZTY01000076.1 8390 9625 2 + 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229919.peg.543 CDS AZTY01000076.1 9630 9779 3 + 150 hypothetical protein - none -
fig|6666666.229919.peg.544 CDS AZTY01000076.1 9776 10864 2 + 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229919.peg.545 CDS AZTY01000076.1 10943 11200 2 + 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229919.peg.546 CDS AZTY01000076.1 11461 12612 1 + 1152 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229919.peg.547 CDS AZTY01000076.1 12843 12983 3 + 141 hypothetical protein - none -
fig|6666666.229919.peg.548 CDS AZTY01000076.1 13067 13183 2 + 117 hypothetical protein - none -
fig|6666666.229919.peg.549 CDS AZTY01000076.1 13252 14562 1 + 1311 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway
fig|6666666.229919.peg.550 CDS AZTY01000076.1 15078 14659 -3 - 420 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.229919.peg.551 CDS AZTY01000076.1 15635 15078 -2 - 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229919.peg.552 CDS AZTY01000076.1 16387 15653 -1 - 735 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
RNA methylation
fig|6666666.229919.peg.553 CDS AZTY01000076.1 16386 16517 3 + 132 hypothetical protein - none -
fig|6666666.229919.peg.554 CDS AZTY01000076.1 16791 16474 -3 - 318 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229919.peg.555 CDS AZTY01000076.1 17833 16946 -1 - 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229919.peg.556 CDS AZTY01000076.1 19273 17909 -1 - 1365 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229919.peg.557 CDS AZTY01000076.1 19487 19305 -2 - 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229919.peg.558 CDS AZTY01000076.1 22234 19610 -1 - 2625 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229919.peg.559 CDS AZTY01000076.1 22859 22434 -2 - 426 Universal stress protein A Universal stress protein family
fig|6666666.229919.peg.560 CDS AZTY01000076.1 22978 23835 1 + 858 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229919.peg.561 CDS AZTY01000076.1 24817 23933 -1 - 885 Cytosine deaminase (EC 3.5.4.1) Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229919.peg.562 CDS AZTY01000077.1 26 2422 2 + 2397 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229919.peg.563 CDS AZTY01000077.1 2499 2903 3 + 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229919.peg.564 CDS AZTY01000078.1 870 202 -3 - 669 YheO-like PAS domain - none -
fig|6666666.229919.peg.565 CDS AZTY01000078.1 1675 950 -1 - 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229919.peg.566 CDS AZTY01000078.1 1770 1985 3 + 216 Protein SlyX - none -
fig|6666666.229919.peg.567 CDS AZTY01000078.1 2192 2046 -2 - 147 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229919.peg.568 CDS AZTY01000079.1 2372 1143 -2 - 1230 hypothetical protein - none -
fig|6666666.229919.peg.569 CDS AZTY01000079.1 2677 2513 -1 - 165 hypothetical protein - none -
fig|6666666.229919.peg.570 CDS AZTY01000079.1 3350 2844 -2 - 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229919.peg.571 CDS AZTY01000079.1 4047 3562 -3 - 486 Putative membrane protein - none -
fig|6666666.229919.peg.572 CDS AZTY01000079.1 4655 4050 -2 - 606 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229919.peg.573 CDS AZTY01000079.1 5257 4655 -1 - 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229919.peg.574 CDS AZTY01000079.1 5385 5765 3 + 381 FIG00782409: hypothetical protein - none -
fig|6666666.229919.peg.575 CDS AZTY01000079.1 7138 6281 -1 - 858 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229919.peg.576 CDS AZTY01000080.1 1217 3 -2 - 1215 Ferrichrome-iron receptor - none -
fig|6666666.229919.peg.577 CDS AZTY01000081.1 44 2302 2 + 2259 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229919.peg.578 CDS AZTY01000081.1 2324 3397 2 + 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229919.peg.579 CDS AZTY01000081.1 3418 4290 1 + 873 Murein endopeptidase - none -
fig|6666666.229919.peg.580 CDS AZTY01000081.1 4294 5061 1 + 768 Putative membrane protein YfcA - none -
fig|6666666.229919.peg.581 CDS AZTY01000083.1 3 494 3 + 492 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229919.peg.582 CDS AZTY01000083.1 528 1298 3 + 771 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229919.peg.583 CDS AZTY01000083.1 1308 1730 3 + 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229919.peg.584 CDS AZTY01000083.1 1723 2787 1 + 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229919.peg.585 CDS AZTY01000083.1 2828 3328 2 + 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229919.peg.586 CDS AZTY01000083.1 3433 3320 -1 - 114 hypothetical protein - none -
fig|6666666.229919.peg.587 CDS AZTY01000083.1 4678 3533 -1 - 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229919.peg.588 CDS AZTY01000083.1 5537 4734 -2 - 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229919.peg.589 CDS AZTY01000083.1 6570 5692 -3 - 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229919.peg.590 CDS AZTY01000083.1 7449 6580 -3 - 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229919.peg.591 CDS AZTY01000083.1 8346 7459 -3 - 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229919.peg.592 CDS AZTY01000083.1 9061 8360 -1 - 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229919.peg.593 CDS AZTY01000083.1 9303 10289 3 + 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229919.peg.594 CDS AZTY01000083.1 10353 12203 3 + 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229919.peg.595 CDS AZTY01000083.1 12341 13471 2 + 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229919.peg.596 CDS AZTY01000083.1 13720 15186 1 + 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229919.peg.597 CDS AZTY01000084.1 526 639 1 + 114 hypothetical protein - none -
fig|6666666.229919.peg.598 CDS AZTY01000084.1 1558 692 -1 - 867 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229919.peg.599 CDS AZTY01000086.1 128 754 2 + 627 Probable phospholipase protein - none -
fig|6666666.229919.peg.600 CDS AZTY01000087.1 23 637 2 + 615 Tyrosine-specific transport protein - none -
fig|6666666.229919.peg.601 CDS AZTY01000087.1 1322 933 -2 - 390 LSU ribosomal protein L17p - none -
fig|6666666.229919.peg.602 CDS AZTY01000087.1 2353 1364 -1 - 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229919.peg.603 CDS AZTY01000087.1 3002 2382 -2 - 621 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229919.peg.604 CDS AZTY01000087.1 3421 3032 -1 - 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229919.peg.605 CDS AZTY01000087.1 3793 3437 -1 - 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229919.peg.606 CDS AZTY01000087.1 5396 4071 -2 - 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229919.peg.607 CDS AZTY01000087.1 5834 5400 -2 - 435 LSU ribosomal protein L15p (L27Ae) - none -
fig|6666666.229919.peg.608 CDS AZTY01000087.1 6524 6024 -2 - 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229919.peg.609 CDS AZTY01000087.1 6893 6540 -2 - 354 LSU ribosomal protein L18p (L5e) - none -
fig|6666666.229919.peg.610 CDS AZTY01000087.1 7440 6907 -3 - 534 LSU ribosomal protein L6p (L9e) - none -
fig|6666666.229919.peg.611 CDS AZTY01000087.1 7848 7456 -3 - 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229919.peg.612 CDS AZTY01000087.1 8190 7885 -3 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229919.peg.613 CDS AZTY01000087.1 8742 8203 -3 - 540 LSU ribosomal protein L5p (L11e) - none -
fig|6666666.229919.peg.614 CDS AZTY01000087.1 9071 8760 -2 - 312 LSU ribosomal protein L24p (L26e) - none -
fig|6666666.229919.peg.615 CDS AZTY01000087.1 9780 10064 3 + 285 Mobile element protein - none -
fig|6666666.229919.peg.616 CDS AZTY01000087.1 11090 10068 -2 - 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229919.peg.617 CDS AZTY01000087.1 11875 11111 -1 - 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229919.peg.618 CDS AZTY01000087.1 12575 11913 -2 - 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229919.peg.619 CDS AZTY01000087.1 12803 12579 -2 - 225 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229919.peg.620 CDS AZTY01000087.1 13081 12950 -1 - 132 hypothetical protein - none -
fig|6666666.229919.peg.621 CDS AZTY01000087.1 13527 13351 -3 - 177 hypothetical protein - none -
fig|6666666.229919.peg.622 CDS AZTY01000087.1 14546 13536 -2 - 1011 hypothetical protein - none -
fig|6666666.229919.peg.623 CDS AZTY01000087.1 16534 14549 -1 - 1986 hypothetical protein - none -
fig|6666666.229919.peg.624 CDS AZTY01000087.1 17804 16692 -2 - 1113 hypothetical protein - none -
fig|6666666.229919.peg.625 CDS AZTY01000087.1 18028 17849 -1 - 180 hypothetical protein - none -
fig|6666666.229919.peg.626 CDS AZTY01000088.1 5 1072 2 + 1068 HflK protein Hfl operon
fig|6666666.229919.peg.627 CDS AZTY01000088.1 1072 1959 1 + 888 HflC protein Hfl operon
fig|6666666.229919.peg.628 CDS AZTY01000088.1 1989 2114 3 + 126 hypothetical protein - none -
fig|6666666.229919.peg.629 CDS AZTY01000088.1 3435 2137 -3 - 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229919.peg.630 CDS AZTY01000088.1 4492 3599 -1 - 894 Tyrosine recombinase XerD - none -
fig|6666666.229919.peg.631 CDS AZTY01000088.1 4881 4495 -3 - 387 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229919.peg.632 CDS AZTY01000089.1 3453 1060 -3 - 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.229919.peg.633 CDS AZTY01000089.1 3714 3499 -3 - 216 hypothetical protein - none -
fig|6666666.229919.peg.634 CDS AZTY01000089.1 4057 3716 -1 - 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229919.peg.635 CDS AZTY01000089.1 4191 4991 3 + 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965
fig|6666666.229919.peg.636 CDS AZTY01000089.1 5063 7654 2 + 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229919.peg.637 CDS AZTY01000089.1 9013 7730 -1 - 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229919.peg.638 CDS AZTY01000089.1 9141 10214 3 + 1074 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.229919.peg.639 CDS AZTY01000091.1 286 1989 1 + 1704 Periplasmic alpha-amylase (EC 3.2.1.1) - none -
fig|6666666.229919.peg.640 CDS AZTY01000091.1 3089 2049 -2 - 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229919.peg.641 CDS AZTY01000091.1 5103 3073 -3 - 2031 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229919.peg.642 CDS AZTY01000091.1 5466 5155 -3 - 312 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229919.peg.643 CDS AZTY01000092.1 1453 23 -1 - 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229919.peg.644 CDS AZTY01000092.1 2112 1591 -3 - 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229919.peg.645 CDS AZTY01000092.1 3243 2155 -3 - 1089 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229919.peg.646 CDS AZTY01000093.1 31 627 1 + 597 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229919.peg.647 CDS AZTY01000093.1 1843 779 -1 - 1065 FIG01220323: hypothetical protein - none -
fig|6666666.229919.peg.648 CDS AZTY01000093.1 1943 2833 2 + 891 Transcriptional regulator, LysR family - none -
fig|6666666.229919.peg.649 CDS AZTY01000093.1 4081 2972 -1 - 1110 Putative exported protein precursor - none -
fig|6666666.229919.peg.650 CDS AZTY01000093.1 5873 4218 -2 - 1656 Carboxylesterase type B - none -
fig|6666666.229919.peg.651 CDS AZTY01000093.1 7079 6099 -2 - 981 Aldo-keto reductase - none -
fig|6666666.229919.peg.652 CDS AZTY01000093.1 7988 7143 -2 - 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229919.peg.653 CDS AZTY01000093.1 8171 9064 2 + 894 Transcriptional regulator, LysR family - none -
fig|6666666.229919.peg.654 CDS AZTY01000094.1 1930 665 -1 - 1266 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229919.peg.655 CDS AZTY01000095.1 1349 396 -2 - 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229919.peg.656 CDS AZTY01000095.1 2266 1409 -1 - 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229919.peg.657 CDS AZTY01000095.1 3717 2986 -3 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229919.peg.658 CDS AZTY01000095.1 3954 3733 -3 - 222 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229919.peg.659 CDS AZTY01000096.1 87 1607 3 + 1521 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229919.peg.660 CDS AZTY01000098.1 920 159 -2 - 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229919.peg.661 CDS AZTY01000098.1 988 1455 1 + 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229919.peg.662 CDS AZTY01000098.1 2874 1543 -3 - 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229919.peg.663 CDS AZTY01000098.1 4045 2885 -1 - 1161 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229919.peg.664 CDS AZTY01000098.1 5139 4057 -3 - 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229919.peg.665 CDS AZTY01000098.1 5314 5198 -1 - 117 hypothetical protein - none -
fig|6666666.229919.peg.666 CDS AZTY01000098.1 5339 5671 2 + 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229919.peg.667 CDS AZTY01000098.1 5779 5633 -1 - 147 hypothetical protein - none -
fig|6666666.229919.peg.668 CDS AZTY01000098.1 7415 5826 -2 - 1590 L-lactate permease Lactate utilization
fig|6666666.229919.peg.669 CDS AZTY01000098.1 8802 7657 -3 - 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229919.peg.670 CDS AZTY01000098.1 9249 9103 -3 - 147 hypothetical protein - none -
fig|6666666.229919.peg.671 CDS AZTY01000098.1 10376 9426 -2 - 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229919.peg.672 CDS AZTY01000098.1 11055 10417 -3 - 639 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229919.peg.673 CDS AZTY01000099.1 1887 778 -3 - 1110 regulator of length of O-antigen component of lipopolysaccharide chains KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.674 CDS AZTY01000099.1 2785 1997 -1 - 789 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229919.peg.675 CDS AZTY01000099.1 3588 2785 -3 - 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229919.peg.676 CDS AZTY01000099.1 4610 3615 -2 - 996 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229919.peg.677 CDS AZTY01000099.1 4591 4761 1 + 171 hypothetical protein - none -
fig|6666666.229919.peg.678 CDS AZTY01000099.1 5559 4750 -3 - 810 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229919.peg.679 CDS AZTY01000099.1 6509 5628 -2 - 882 Glycosyltransferase - none -
fig|6666666.229919.peg.680 CDS AZTY01000099.1 7699 6509 -1 - 1191 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229919.peg.681 CDS AZTY01000099.1 8484 7708 -3 - 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229919.peg.682 CDS AZTY01000099.1 8675 10138 2 + 1464 putative flippase - none -
fig|6666666.229919.peg.683 CDS AZTY01000099.1 10135 11091 1 + 957 Polysaccharide polymerization protein - none -
fig|6666666.229919.peg.684 CDS AZTY01000099.1 11200 11451 1 + 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229919.peg.685 CDS AZTY01000099.1 11448 11702 3 + 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229919.peg.686 CDS AZTY01000099.1 11848 11699 -1 - 150 hypothetical protein - none -
fig|6666666.229919.peg.687 CDS AZTY01000100.1 80 907 2 + 828 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229919.peg.688 CDS AZTY01000100.1 3213 1039 -3 - 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229919.peg.689 CDS AZTY01000100.1 4735 3386 -1 - 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229919.peg.690 CDS AZTY01000100.1 4953 5471 3 + 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229919.peg.691 CDS AZTY01000100.1 5590 5468 -1 - 123 hypothetical protein - none -
fig|6666666.229919.peg.692 CDS AZTY01000100.1 6539 5541 -2 - 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229919.peg.693 CDS AZTY01000100.1 7412 6588 -2 - 825 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229919.peg.694 CDS AZTY01000100.1 7633 10743 1 + 3111 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229919.peg.697 CDS AZTY01000100.1 10841 11671 2 + 831 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229919.peg.698 CDS AZTY01000100.1 11664 12377 3 + 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229919.peg.699 CDS AZTY01000100.1 12527 12643 2 + 117 hypothetical protein - none -
fig|6666666.229919.peg.700 CDS AZTY01000100.1 13843 12998 -1 - 846 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229919.peg.701 CDS AZTY01000101.1 187 840 1 + 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229919.peg.702 CDS AZTY01000102.1 221 15 -2 - 207 hypothetical protein - none -
fig|6666666.229919.peg.703 CDS AZTY01000102.1 244 1149 1 + 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229919.peg.704 CDS AZTY01000102.1 1199 1459 2 + 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229919.peg.705 CDS AZTY01000102.1 1499 1807 2 + 309 FIG074102: hypothetical protein - none -
fig|6666666.229919.peg.706 CDS AZTY01000102.1 1929 2267 3 + 339 FIG074102: hypothetical protein - none -
fig|6666666.229919.peg.707 CDS AZTY01000102.1 2404 2538 1 + 135 hypothetical protein - none -
fig|6666666.229919.peg.708 CDS AZTY01000102.1 2586 4454 3 + 1869 ATPase family protein - none -
fig|6666666.229919.peg.709 CDS AZTY01000102.1 4447 6558 1 + 2112 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229919.peg.710 CDS AZTY01000102.1 8261 6627 -2 - 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229919.peg.711 CDS AZTY01000102.1 8375 9790 2 + 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229919.peg.712 CDS AZTY01000103.1 79 702 1 + 624 hypothetical protein - none -
fig|6666666.229919.peg.713 CDS AZTY01000104.1 44 370 2 + 327 hypothetical protein - none -
fig|6666666.229919.peg.714 CDS AZTY01000104.1 460 609 1 + 150 hypothetical protein - none -
fig|6666666.229919.peg.715 CDS AZTY01000104.1 748 3243 1 + 2496 hypothetical protein - none -
fig|6666666.229919.peg.716 CDS AZTY01000104.1 3687 4244 3 + 558 hypothetical protein - none -
fig|6666666.229919.peg.717 CDS AZTY01000104.1 5985 4576 -3 - 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229919.peg.718 CDS AZTY01000104.1 6055 6567 1 + 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229919.peg.719 CDS AZTY01000104.1 6661 6816 1 + 156 hypothetical protein - none -
fig|6666666.229919.peg.720 CDS AZTY01000104.1 6809 7090 2 + 282 hypothetical protein - none -
fig|6666666.229919.peg.721 CDS AZTY01000104.1 7093 7881 1 + 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229919.peg.722 CDS AZTY01000104.1 8375 7908 -2 - 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229919.peg.723 CDS AZTY01000104.1 8796 8677 -3 - 120 hypothetical protein - none -
fig|6666666.229919.peg.724 CDS AZTY01000104.1 9228 8977 -3 - 252 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229919.peg.725 CDS AZTY01000105.1 73 630 1 + 558 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229919.peg.726 CDS AZTY01000105.1 633 926 3 + 294 AagD - none -
fig|6666666.229919.peg.727 CDS AZTY01000105.1 1016 894 -2 - 123 hypothetical protein - none -
fig|6666666.229919.peg.728 CDS AZTY01000105.1 2369 1044 -2 - 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229919.peg.729 CDS AZTY01000105.1 2540 3172 2 + 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229919.peg.730 CDS AZTY01000105.1 3264 3124 -3 - 141 hypothetical protein - none -
fig|6666666.229919.peg.731 CDS AZTY01000106.1 1342 641 -1 - 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229919.peg.732 CDS AZTY01000106.1 1363 2061 1 + 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229919.peg.733 CDS AZTY01000106.1 2670 2119 -3 - 552 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229919.peg.734 CDS AZTY01000106.1 3188 2622 -2 - 567 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229919.peg.735 CDS AZTY01000108.1 9 1673 3 + 1665 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229919.peg.736 CDS AZTY01000109.1 1152 382 -3 - 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.229919.peg.737 CDS AZTY01000109.1 2965 1157 -1 - 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.229919.peg.738 CDS AZTY01000109.1 3209 3021 -2 - 189 hypothetical protein - none -
fig|6666666.229919.peg.739 CDS AZTY01000109.1 3274 4245 1 + 972 Translation elongation factor P Lys34:lysine transferase - none -
fig|6666666.229919.peg.740 CDS AZTY01000109.1 5078 4311 -2 - 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229919.peg.741 CDS AZTY01000109.1 6061 5078 -1 - 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229919.peg.742 CDS AZTY01000109.1 7050 6061 -3 - 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229919.peg.743 CDS AZTY01000109.1 7943 7050 -2 - 894 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229919.peg.744 CDS AZTY01000109.1 9082 8012 -1 - 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229919.peg.745 CDS AZTY01000109.1 9153 9596 3 + 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229919.peg.746 CDS AZTY01000109.1 9681 10283 3 + 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229919.peg.747 CDS AZTY01000110.1 27 629 3 + 603 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229919.peg.748 CDS AZTY01000110.1 1358 723 -2 - 636 Cytochrome c-type protein NapC - none -
fig|6666666.229919.peg.749 CDS AZTY01000110.1 1821 1372 -3 - 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229919.peg.750 CDS AZTY01000110.1 2740 1859 -1 - 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229919.peg.751 CDS AZTY01000110.1 3579 2740 -3 - 840 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229919.peg.752 CDS AZTY01000110.1 6113 3627 -2 - 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229919.peg.753 CDS AZTY01000110.1 6431 6147 -2 - 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229919.peg.754 CDS AZTY01000110.1 6661 6497 -1 - 165 hypothetical protein - none -
fig|6666666.229919.peg.755 CDS AZTY01000111.1 948 100 -3 - 849 Translation elongation factor Ts CBSS-312309.3.peg.1965
fig|6666666.229919.peg.756 CDS AZTY01000111.1 1054 941 -1 - 114 hypothetical protein - none -
fig|6666666.229919.peg.757 CDS AZTY01000111.1 1825 1103 -1 - 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial
fig|6666666.229919.peg.758 CDS AZTY01000111.1 2289 1900 -3 - 390 Patatin-like phospholipase - none -
fig|6666666.229919.peg.759 CDS AZTY01000111.1 3295 2408 -1 - 888 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229919.peg.760 CDS AZTY01000111.1 4186 3323 -1 - 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229919.peg.761 CDS AZTY01000111.1 4304 5020 2 + 717 Ribonuclease PH (EC 2.7.7.56) tRNA processing
fig|6666666.229919.peg.762 CDS AZTY01000112.1 1023 340 -3 - 684 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Phosphoglycerate mutase protein family
fig|6666666.229919.peg.763 CDS AZTY01000112.1 1330 2988 1 + 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229919.peg.764 CDS AZTY01000112.1 3238 4455 1 + 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229919.peg.765 CDS AZTY01000113.1 44 1528 2 + 1485 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229919.peg.766 CDS AZTY01000113.1 2871 1921 -3 - 951 hypothetical protein - none -
fig|6666666.229919.peg.767 CDS AZTY01000113.1 3445 3065 -1 - 381 Transthyretin-like periplasmic protein - none -
fig|6666666.229919.peg.768 CDS AZTY01000113.1 4653 5606 3 + 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) - none -
fig|6666666.229919.peg.769 CDS AZTY01000113.1 5669 6526 2 + 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229919.peg.770 CDS AZTY01000113.1 6558 7904 3 + 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229919.peg.771 CDS AZTY01000113.1 8267 7932 -2 - 336 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229919.peg.772 CDS AZTY01000114.1 12 269 3 + 258 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229919.peg.773 CDS AZTY01000114.1 293 1375 2 + 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229919.peg.774 CDS AZTY01000115.1 39 440 3 + 402 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229919.peg.775 CDS AZTY01000115.1 556 437 -1 - 120 tmRNA-binding protein SmpB - none -
fig|6666666.229919.peg.776 CDS AZTY01000115.1 990 508 -3 - 483 tmRNA-binding protein SmpB - none -
fig|6666666.229919.peg.777 CDS AZTY01000115.1 1336 1199 -1 - 138 hypothetical protein - none -
fig|6666666.229919.peg.778 CDS AZTY01000115.1 1359 2942 3 + 1584 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229919.peg.779 CDS AZTY01000115.1 3085 3747 1 + 663 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229919.peg.780 CDS AZTY01000115.1 3723 3890 3 + 168 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229919.peg.781 CDS AZTY01000115.1 3859 4005 1 + 147 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229919.peg.782 CDS AZTY01000115.1 4015 4953 1 + 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229919.peg.783 CDS AZTY01000115.1 4963 5946 1 + 984 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229919.peg.784 CDS AZTY01000115.1 5943 6941 3 + 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229919.peg.785 CDS AZTY01000115.1 7756 7049 -1 - 708 Aerobic respiration control protein arcA - none -
fig|6666666.229919.peg.786 CDS AZTY01000115.1 8158 8018 -1 - 141 LSU ribosomal protein L36p - none -
fig|6666666.229919.peg.787 CDS AZTY01000115.1 8434 8228 -1 - 207 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent - none -
fig|6666666.229919.peg.788 CDS AZTY01000115.1 9214 8645 -1 - 570 Lysine decarboxylase family - none -
fig|6666666.229919.peg.789 CDS AZTY01000116.1 1017 76 -3 - 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229919.peg.790 CDS AZTY01000116.1 1180 2667 1 + 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229919.peg.791 CDS AZTY01000116.1 2683 3711 1 + 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229919.peg.792 CDS AZTY01000116.1 3717 5174 3 + 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229919.peg.793 CDS AZTY01000116.1 7537 5222 -1 - 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229919.peg.794 CDS AZTY01000117.1 5415 3967 -3 - 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229919.peg.795 CDS AZTY01000117.1 6572 5712 -2 - 861 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229919.peg.796 CDS AZTY01000117.1 7183 6569 -1 - 615 ABC transporter ATP-binding protein - none -
fig|6666666.229919.peg.797 CDS AZTY01000117.1 7983 7186 -3 - 798 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229919.peg.798 CDS AZTY01000117.1 8692 7958 -1 - 735 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229919.peg.799 CDS AZTY01000117.1 9171 9356 3 + 186 Mobile element protein - none -
fig|6666666.229919.peg.800 CDS AZTY01000117.1 9398 9646 2 + 249 Mobile element protein - none -
fig|6666666.229919.peg.801 CDS AZTY01000117.1 11166 9733 -3 - 1434 Putative GTP-binding protein YdgA - none -
fig|6666666.229919.peg.802 CDS AZTY01000117.1 11455 13356 1 + 1902 Chaperone protein DnaK GroEL GroES;
Protein chaperones
fig|6666666.229919.peg.803 CDS AZTY01000118.1 2366 1044 -2 - 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229919.peg.804 CDS AZTY01000118.1 2774 3133 2 + 360 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229919.peg.805 CDS AZTY01000118.1 3149 3661 2 + 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229919.peg.806 CDS AZTY01000118.1 3739 4752 1 + 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.807 CDS AZTY01000118.1 4755 5552 3 + 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229919.peg.808 CDS AZTY01000118.1 5731 5600 -1 - 132 hypothetical protein - none -
fig|6666666.229919.peg.809 CDS AZTY01000118.1 5752 6156 1 + 405 hypothetical protein - none -
fig|6666666.229919.peg.810 CDS AZTY01000118.1 7207 6194 -1 - 1014 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) - none -
fig|6666666.229919.peg.811 CDS AZTY01000118.1 7403 7621 2 + 219 FIG074102: hypothetical protein - none -
fig|6666666.229919.peg.812 CDS AZTY01000118.1 7678 8121 1 + 444 Flavoprotein MioC Flavodoxin
fig|6666666.229919.peg.813 CDS AZTY01000119.1 60 590 3 + 531 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229919.peg.814 CDS AZTY01000119.1 618 1367 3 + 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229919.peg.815 CDS AZTY01000120.1 627 49 -3 - 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229919.peg.816 CDS AZTY01000120.1 863 630 -2 - 234 unknown - none -
fig|6666666.229919.peg.817 CDS AZTY01000120.1 1956 928 -3 - 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.229919.peg.818 CDS AZTY01000120.1 2146 1979 -1 - 168 hypothetical protein - none -
fig|6666666.229919.peg.819 CDS AZTY01000120.1 2181 2396 3 + 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229919.peg.820 CDS AZTY01000121.1 292 1560 1 + 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229919.peg.821 CDS AZTY01000121.1 1708 2112 1 + 405 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) - none -
fig|6666666.229919.peg.822 CDS AZTY01000121.1 2146 2886 1 + 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229919.peg.823 CDS AZTY01000121.1 2898 3308 3 + 411 excinuclease ABC subunit A - none -
fig|6666666.229919.peg.824 CDS AZTY01000122.1 954 328 -3 - 627 membrane protein ykgB - none -
fig|6666666.229919.peg.825 CDS AZTY01000122.1 1248 3329 3 + 2082 oligopeptide transporter - none -
fig|6666666.229919.peg.826 CDS AZTY01000122.1 3391 3819 1 + 429 hypothetical protein - none -
fig|6666666.229919.peg.827 CDS AZTY01000122.1 3857 4666 2 + 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229919.peg.828 CDS AZTY01000122.1 4689 6248 3 + 1560 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229919.peg.829 CDS AZTY01000122.1 6501 7199 3 + 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229919.peg.830 CDS AZTY01000122.1 7212 7670 3 + 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229919.peg.831 CDS AZTY01000122.1 8205 8059 -3 - 147 hypothetical protein - none -
fig|6666666.229919.peg.832 CDS AZTY01000122.1 8226 9680 3 + 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229919.peg.833 CDS AZTY01000122.1 10157 10026 -2 - 132 hypothetical protein - none -
fig|6666666.229919.peg.834 CDS AZTY01000122.1 10586 10467 -2 - 120 hypothetical protein - none -
fig|6666666.229919.peg.835 CDS AZTY01000122.1 10588 11535 1 + 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229919.peg.836 CDS AZTY01000122.1 11551 12111 1 + 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229919.peg.837 CDS AZTY01000122.1 12136 12429 1 + 294 COG1872 - none -
fig|6666666.229919.peg.838 CDS AZTY01000122.1 12546 13205 3 + 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229919.peg.839 CDS AZTY01000122.1 13448 13819 2 + 372 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229919.peg.840 CDS AZTY01000122.1 13819 13971 1 + 153 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229919.peg.841 CDS AZTY01000123.1 1368 1231 -3 - 138 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.229919.peg.842 CDS AZTY01000123.1 2659 1349 -1 - 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism
fig|6666666.229919.peg.843 CDS AZTY01000123.1 4695 2686 -3 - 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism
fig|6666666.229919.peg.844 CDS AZTY01000123.1 6887 4692 -2 - 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism
fig|6666666.229919.peg.845 CDS AZTY01000123.1 7444 6875 -1 - 570 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose utilization cluster
fig|6666666.229919.peg.846 CDS AZTY01000123.1 8652 7903 -3 - 750 hypothetical protein - none -
fig|6666666.229919.peg.847 CDS AZTY01000124.1 1941 622 -3 - 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229919.peg.848 CDS AZTY01000124.1 2199 3197 3 + 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229919.peg.849 CDS AZTY01000124.1 3272 4768 2 + 1497 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229919.peg.850 CDS AZTY01000124.1 4772 4969 2 + 198 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229919.peg.851 CDS AZTY01000124.1 4938 5900 3 + 963 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229919.peg.852 CDS AZTY01000124.1 5989 6180 1 + 192 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229919.peg.853 CDS AZTY01000124.1 6347 7177 2 + 831 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229919.peg.854 CDS AZTY01000124.1 7230 8576 3 + 1347 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229919.peg.855 CDS AZTY01000124.1 8702 8580 -2 - 123 hypothetical protein - none -
fig|6666666.229919.peg.856 CDS AZTY01000124.1 8691 9863 3 + 1173 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229919.peg.857 CDS AZTY01000124.1 10666 9890 -1 - 777 Permeases of the major facilitator superfamily - none -
fig|6666666.229919.peg.858 CDS AZTY01000124.1 11346 10654 -3 - 693 Permeases of the major facilitator superfamily - none -
fig|6666666.229919.peg.859 CDS AZTY01000124.1 11406 11519 3 + 114 hypothetical protein - none -
fig|6666666.229919.peg.860 CDS AZTY01000124.1 11631 12629 3 + 999 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229919.peg.861 CDS AZTY01000124.1 12641 13444 2 + 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229919.peg.862 CDS AZTY01000124.1 13460 14296 2 + 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229919.peg.863 CDS AZTY01000124.1 16002 14965 -3 - 1038 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229919.peg.864 CDS AZTY01000124.1 17601 16183 -3 - 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229919.peg.865 CDS AZTY01000124.1 17831 18313 2 + 483 FxsA protein - none -
fig|6666666.229919.peg.866 CDS AZTY01000124.1 18400 18690 1 + 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229919.peg.867 CDS AZTY01000124.1 18810 20444 3 + 1635 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229919.peg.868 CDS AZTY01000124.1 21390 20533 -3 - 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines
fig|6666666.229919.peg.869 CDS AZTY01000124.1 22081 21959 -1 - 123 hypothetical protein - none -
fig|6666666.229919.peg.870 CDS AZTY01000125.1 660 85 -3 - 576 Flp pilus assembly membrane protein TadE Widespread colonization island
fig|6666666.229919.peg.871 CDS AZTY01000125.1 1436 675 -2 - 762 Flp pilus assembly protein TadD, contains TPR repeat Widespread colonization island
fig|6666666.229919.peg.872 CDS AZTY01000125.1 2292 1426 -3 - 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229919.peg.873 CDS AZTY01000125.1 3176 2289 -2 - 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229919.peg.874 CDS AZTY01000125.1 4456 3176 -1 - 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229919.peg.875 CDS AZTY01000125.1 5594 4470 -2 - 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229919.peg.876 CDS AZTY01000125.1 6113 5610 -2 - 504 Flp pilus assembly protein RcpB Widespread colonization island
fig|6666666.229919.peg.877 CDS AZTY01000125.1 7372 6110 -1 - 1263 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229919.peg.878 CDS AZTY01000125.1 8318 7494 -2 - 825 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229919.peg.879 CDS AZTY01000125.1 8797 8369 -1 - 429 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229919.peg.880 CDS AZTY01000125.1 9368 9141 -2 - 228 Flp pilus assembly protein, pilin Flp Widespread colonization island
fig|6666666.229919.peg.881 CDS AZTY01000125.1 9334 9447 1 + 114 hypothetical protein - none -
fig|6666666.229919.peg.882 CDS AZTY01000125.1 9935 10399 2 + 465 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229919.peg.883 CDS AZTY01000125.1 10561 11259 1 + 699 unknown - none -
fig|6666666.229919.peg.884 CDS AZTY01000125.1 11263 13185 1 + 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229919.peg.885 CDS AZTY01000125.1 13226 13399 2 + 174 hypothetical protein - none -
fig|6666666.229919.peg.886 CDS AZTY01000126.1 18 914 3 + 897 hypothetical protein - none -
fig|6666666.229919.peg.887 CDS AZTY01000126.1 924 1577 3 + 654 hypothetical protein - none -
fig|6666666.229919.peg.888 CDS AZTY01000126.1 2320 1646 -1 - 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229919.peg.889 CDS AZTY01000126.1 2858 2397 -2 - 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229919.peg.890 CDS AZTY01000126.1 3980 2913 -2 - 1068 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229919.peg.891 CDS AZTY01000127.1 140 280 2 + 141 Mobile element protein - none -
fig|6666666.229919.peg.892 CDS AZTY01000127.1 317 565 2 + 249 Mobile element protein - none -
fig|6666666.229919.peg.893 CDS AZTY01000128.1 1197 55 -3 - 1143 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Universal GTPases
fig|6666666.229919.peg.894 CDS AZTY01000129.1 693 43 -3 - 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229919.peg.895 CDS AZTY01000129.1 1002 2042 3 + 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229919.peg.896 CDS AZTY01000129.1 2204 3247 2 + 1044 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229919.peg.897 CDS AZTY01000129.1 3275 5332 2 + 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229919.peg.898 CDS AZTY01000129.1 5348 6394 2 + 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229919.peg.899 CDS AZTY01000129.1 6673 8793 1 + 2121 unknown - none -
fig|6666666.229919.peg.900 CDS AZTY01000129.1 10603 10031 -1 - 573 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.229919.peg.901 CDS AZTY01000129.1 11392 10733 -1 - 660 putative membrane protein - none -
fig|6666666.229919.peg.902 CDS AZTY01000129.1 11589 11473 -3 - 117 hypothetical protein - none -
fig|6666666.229919.peg.903 CDS AZTY01000129.1 11604 12410 3 + 807 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229919.peg.904 CDS AZTY01000129.1 13680 12673 -3 - 1008 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229919.peg.905 CDS AZTY01000130.1 8 1306 2 + 1299 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229919.peg.906 CDS AZTY01000130.1 1969 1373 -1 - 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229919.peg.907 CDS AZTY01000130.1 3006 1978 -3 - 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229919.peg.908 CDS AZTY01000130.1 4139 3015 -2 - 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229919.peg.909 CDS AZTY01000130.1 4591 4139 -1 - 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229919.peg.910 CDS AZTY01000130.1 5769 4708 -3 - 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229919.peg.911 CDS AZTY01000130.1 6694 5789 -1 - 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229919.peg.912 CDS AZTY01000130.1 7156 8175 1 + 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229919.peg.913 CDS AZTY01000130.1 8543 9283 2 + 741 FIG00698611: hypothetical protein - none -
fig|6666666.229919.peg.914 CDS AZTY01000130.1 10452 9439 -3 - 1014 Malate dehydrogenase (EC 1.1.1.37) TCA Cycle
fig|6666666.229919.peg.915 CDS AZTY01000130.1 10612 10490 -1 - 123 hypothetical protein - none -
fig|6666666.229919.peg.916 CDS AZTY01000130.1 10637 11104 2 + 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229919.peg.917 CDS AZTY01000130.1 11128 12015 1 + 888 Cell division inhibitor Persister Cells
fig|6666666.229919.peg.918 CDS AZTY01000130.1 12206 12787 2 + 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229919.peg.919 CDS AZTY01000130.1 12787 13377 1 + 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229919.peg.920 CDS AZTY01000131.1 65 697 2 + 633 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229919.peg.921 CDS AZTY01000131.1 1143 1000 -3 - 144 hypothetical protein - none -
fig|6666666.229919.peg.922 CDS AZTY01000131.1 2063 1914 -2 - 150 hypothetical protein - none -
fig|6666666.229919.peg.923 CDS AZTY01000131.1 3169 2432 -1 - 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229919.peg.924 CDS AZTY01000131.1 4145 3171 -2 - 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229919.peg.925 CDS AZTY01000131.1 4252 5040 1 + 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) - none -
fig|6666666.229919.peg.926 CDS AZTY01000132.1 311 33 -2 - 279 hypothetical protein - none -
fig|6666666.229919.peg.927 CDS AZTY01000134.1 836 357 -2 - 480 FIG085779: Lipoprotein - none -
fig|6666666.229919.peg.928 CDS AZTY01000134.1 2228 966 -2 - 1263 FIG021862: membrane protein, exporter - none -
fig|6666666.229919.peg.929 CDS AZTY01000135.1 1172 621 -2 - 552 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229919.peg.930 CDS AZTY01000135.1 1690 1253 -1 - 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229919.peg.931 CDS AZTY01000135.1 2656 1700 -1 - 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229919.peg.932 CDS AZTY01000135.1 3323 2739 -2 - 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229919.peg.933 CDS AZTY01000135.1 3942 3367 -3 - 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229919.peg.934 CDS AZTY01000135.1 4329 4075 -3 - 255 YgfY COG2938 - none -
fig|6666666.229919.peg.935 CDS AZTY01000135.1 4698 4369 -3 - 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229919.peg.936 CDS AZTY01000135.1 5652 4765 -3 - 888 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229919.peg.937 CDS AZTY01000136.1 81 1217 3 + 1137 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229919.peg.938 CDS AZTY01000136.1 2108 2593 2 + 486 Ferritin-like protein 2 - none -
fig|6666666.229919.peg.939 CDS AZTY01000136.1 2609 3106 2 + 498 Ferritin-like protein 2 - none -
fig|6666666.229919.peg.940 CDS AZTY01000136.1 3338 3168 -2 - 171 hypothetical protein - none -
fig|6666666.229919.peg.941 CDS AZTY01000136.1 3555 4220 3 + 666 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229919.peg.942 CDS AZTY01000136.1 4338 5270 3 + 933 Universal stress protein E Universal stress protein family
fig|6666666.229919.peg.943 CDS AZTY01000137.1 44 577 2 + 534 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229919.peg.944 CDS AZTY01000137.1 618 1742 3 + 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229919.peg.945 CDS AZTY01000137.1 1823 2446 2 + 624 Hypothetical YciO protein, TsaC/YrdC paralog - none -
fig|6666666.229919.peg.946 CDS AZTY01000137.1 2501 3469 2 + 969 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229919.peg.947 CDS AZTY01000137.1 3500 4471 2 + 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229919.peg.948 CDS AZTY01000137.1 4556 5383 2 + 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229919.peg.949 CDS AZTY01000137.1 5818 5498 -1 - 321 putative cytoplasmic protein - none -
fig|6666666.229919.peg.950 CDS AZTY01000137.1 5985 5851 -3 - 135 hypothetical protein - none -
fig|6666666.229919.peg.951 CDS AZTY01000137.1 7285 6287 -1 - 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229919.peg.952 CDS AZTY01000137.1 8694 7591 -3 - 1104 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229919.peg.953 CDS AZTY01000138.1 1454 2098 2 + 645 converved hypothetical protein - none -
fig|6666666.229919.peg.954 CDS AZTY01000138.1 2147 2866 2 + 720 NADH pyrophosphatase (EC 3.6.1.22) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229919.peg.955 CDS AZTY01000138.1 3035 4099 2 + 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229919.peg.956 CDS AZTY01000138.1 4117 4707 1 + 591 FIG01200173: hypothetical protein - none -
fig|6666666.229919.peg.957 CDS AZTY01000138.1 4874 5146 2 + 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial
fig|6666666.229919.peg.958 CDS AZTY01000139.1 2498 702 -2 - 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229919.peg.959 CDS AZTY01000139.1 2780 2514 -2 - 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229919.peg.960 CDS AZTY01000139.1 3443 3562 2 + 120 hypothetical protein - none -
fig|6666666.229919.peg.961 CDS AZTY01000139.1 4080 3805 -3 - 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229919.peg.962 CDS AZTY01000139.1 4271 4110 -2 - 162 Hydrogenase-2 operon protein hybE - none -
fig|6666666.229919.peg.963 CDS AZTY01000139.1 5964 4534 -3 - 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229919.peg.964 CDS AZTY01000139.1 6251 5973 -2 - 279 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229919.peg.965 CDS AZTY01000139.1 6539 6261 -2 - 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229919.peg.966 CDS AZTY01000139.1 7635 6634 -3 - 1002 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229919.peg.967 CDS AZTY01000139.1 8039 7647 -2 - 393 putative - none -
fig|6666666.229919.peg.968 CDS AZTY01000139.1 8703 8113 -3 - 591 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229919.peg.969 CDS AZTY01000140.1 87 971 3 + 885 FIG065221: Holliday junction DNA helicase - none -
fig|6666666.229919.peg.970 CDS AZTY01000140.1 3135 1468 -3 - 1668 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229919.peg.971 CDS AZTY01000141.1 1407 505 -3 - 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift
fig|6666666.229919.peg.972 CDS AZTY01000141.1 1687 1526 -1 - 162 hypothetical protein - none -
fig|6666666.229919.peg.973 CDS AZTY01000141.1 1771 2454 1 + 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229919.peg.974 CDS AZTY01000141.1 2467 4188 1 + 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229919.peg.975 CDS AZTY01000141.1 4221 4868 3 + 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229919.peg.976 CDS AZTY01000141.1 4885 5577 1 + 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229919.peg.977 CDS AZTY01000141.1 5756 6451 2 + 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229919.peg.978 CDS AZTY01000141.1 6458 6961 2 + 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229919.peg.979 CDS AZTY01000141.1 6961 7614 1 + 654 Substrate-specific component NikM of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229919.peg.980 CDS AZTY01000141.1 7611 8276 3 + 666 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229919.peg.981 CDS AZTY01000141.1 8273 8896 2 + 624 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229919.peg.982 CDS AZTY01000141.1 8975 9784 2 + 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229919.peg.983 CDS AZTY01000141.1 9811 10923 1 + 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229919.peg.984 CDS AZTY01000141.1 10923 11936 3 + 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229919.peg.985 CDS AZTY01000141.1 12381 13586 3 + 1206 hypothetical protein - none -
fig|6666666.229919.peg.986 CDS AZTY01000143.1 45 782 3 + 738 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229919.peg.987 CDS AZTY01000143.1 819 2300 3 + 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229919.peg.988 CDS AZTY01000143.1 2505 2386 -3 - 120 hypothetical protein - none -
fig|6666666.229919.peg.989 CDS AZTY01000143.1 3284 2730 -2 - 555 FIG002003: Protein YdjA - none -
fig|6666666.229919.peg.990 CDS AZTY01000144.1 1697 1059 -2 - 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229919.peg.991 CDS AZTY01000144.1 3153 1708 -3 - 1446 Na(+) H(+) antiporter subunit A - none -
fig|6666666.229919.peg.992 CDS AZTY01000144.1 4131 3166 -3 - 966 Hydrogenase-4 component C (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229919.peg.993 CDS AZTY01000144.1 6160 4139 -1 - 2022 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229919.peg.994 CDS AZTY01000144.1 6793 6194 -1 - 600 Hydrogenase-4 component A - none -
fig|6666666.229919.peg.995 CDS AZTY01000146.1 69 980 3 + 912 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229919.peg.996 CDS AZTY01000146.1 1445 1071 -2 - 375 opacity associated protein - none -
fig|6666666.229919.peg.997 CDS AZTY01000146.1 2829 1507 -3 - 1323 Cell envelope opacity-associated protein A - none -
fig|6666666.229919.peg.998 CDS AZTY01000147.1 2915 84 -2 - 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229919.peg.999 CDS AZTY01000147.1 3085 3570 1 + 486 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229919.peg.1000 CDS AZTY01000147.1 4326 3760 -3 - 567 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229919.peg.1001 CDS AZTY01000147.1 6711 4540 -3 - 2172 Hypothetical SecA-related protein - none -
fig|6666666.229919.peg.1002 CDS AZTY01000147.1 6878 7066 2 + 189 hypothetical protein - none -
fig|6666666.229919.peg.1003 CDS AZTY01000147.1 8577 7462 -3 - 1116 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.229919.peg.1004 CDS AZTY01000148.1 1494 1102 -3 - 393 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229919.peg.1005 CDS AZTY01000149.1 718 1302 1 + 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229919.peg.1006 CDS AZTY01000149.1 1601 2566 2 + 966 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229919.peg.1007 CDS AZTY01000149.1 2584 3381 1 + 798 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229919.peg.1008 CDS AZTY01000149.1 3395 4231 2 + 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229919.peg.1009 CDS AZTY01000149.1 4341 5516 3 + 1176 Cof protein - none -
fig|6666666.229919.peg.1010 CDS AZTY01000149.1 5807 7057 2 + 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229919.peg.1011 CDS AZTY01000149.1 7183 7902 1 + 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229919.peg.1012 CDS AZTY01000149.1 7920 8063 3 + 144 hypothetical protein - none -
fig|6666666.229919.peg.1013 CDS AZTY01000149.1 8205 10592 3 + 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229919.peg.1014 CDS AZTY01000149.1 10608 12524 3 + 1917 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229919.peg.1015 CDS AZTY01000150.1 146 1054 2 + 909 Putative surface protein - none -
fig|6666666.229919.peg.1016 CDS AZTY01000150.1 1068 2525 3 + 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1017 CDS AZTY01000151.1 115 333 1 + 219 FIG00696234: hypothetical protein - none -
fig|6666666.229919.peg.1018 CDS AZTY01000151.1 371 1015 2 + 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229919.peg.1019 CDS AZTY01000151.1 2518 1148 -1 - 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229919.peg.1020 CDS AZTY01000151.1 3458 2613 -2 - 846 Protein involved in catabolism of external DNA DNA processing cluster
fig|6666666.229919.peg.1021 CDS AZTY01000151.1 5058 3553 -3 - 1506 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.229919.peg.1022 CDS AZTY01000151.1 6120 5170 -3 - 951 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.229919.peg.1023 CDS AZTY01000151.1 6254 7063 2 + 810 Type IV pilus biogenesis protein PilM; Competence protein A - none -
fig|6666666.229919.peg.1024 CDS AZTY01000151.1 7074 7592 3 + 519 Type IV pilus biogenesis protein PilN; Competence protein B - none -
fig|6666666.229919.peg.1025 CDS AZTY01000151.1 7589 8113 2 + 525 Competence protein C; Chromosome segregation ATPases - none -
fig|6666666.229919.peg.1026 CDS AZTY01000151.1 8113 8505 1 + 393 Type IV pilus biogenesis protein PilQ; Competence protein D - none -
fig|6666666.229919.peg.1027 CDS AZTY01000151.1 8526 9935 3 + 1410 Type IV pilus biogenesis protein PilQ; Competence protein E - none -
fig|6666666.229919.peg.1028 CDS AZTY01000151.1 10149 10676 3 + 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229919.peg.1029 CDS AZTY01000151.1 10700 11788 2 + 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229919.peg.1030 CDS AZTY01000152.1 1157 645 -2 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.229919.peg.1031 CDS AZTY01000153.1 276 389 3 + 114 hypothetical protein - none -
fig|6666666.229919.peg.1032 CDS AZTY01000153.1 1296 796 -3 - 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229919.peg.1033 CDS AZTY01000153.1 2278 1313 -1 - 966 tRNA(Cytosine32)-2-thiocytidine synthetase tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229919.peg.1034 CDS AZTY01000153.1 2419 2835 1 + 417 putative membrane protein - none -
fig|6666666.229919.peg.1035 CDS AZTY01000153.1 4895 2925 -2 - 1971 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229919.peg.1036 CDS AZTY01000153.1 5526 4897 -3 - 630 FIG00697418: hypothetical protein - none -
fig|6666666.229919.peg.1037 CDS AZTY01000153.1 5605 6606 1 + 1002 ABC transporter, solute-binding protein - none -
fig|6666666.229919.peg.1038 CDS AZTY01000154.1 260 760 2 + 501 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster
fig|6666666.229919.peg.1039 CDS AZTY01000155.1 10 633 1 + 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229919.peg.1040 CDS AZTY01000155.1 785 1162 2 + 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229919.peg.1041 CDS AZTY01000155.1 1149 1475 3 + 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229919.peg.1042 CDS AZTY01000155.1 1488 1718 3 + 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229919.peg.1043 CDS AZTY01000155.1 1734 2183 3 + 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229919.peg.1044 CDS AZTY01000155.1 2173 2370 1 + 198 hypothetical protein - none -
fig|6666666.229919.peg.1045 CDS AZTY01000155.1 2401 3519 1 + 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake - none -
fig|6666666.229919.peg.1046 CDS AZTY01000155.1 4657 3575 -1 - 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229919.peg.1047 CDS AZTY01000155.1 5455 4889 -1 - 567 Glycerol-3-phosphate transporter - none -
fig|6666666.229919.peg.1048 CDS AZTY01000156.1 79 1128 1 + 1050 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229919.peg.1049 CDS AZTY01000156.1 1122 1421 3 + 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229919.peg.1050 CDS AZTY01000156.1 2284 2036 -1 - 249 unknown - none -
fig|6666666.229919.peg.1051 CDS AZTY01000156.1 3062 2739 -2 - 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229919.peg.1052 CDS AZTY01000156.1 4664 3291 -2 - 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229919.peg.1053 CDS AZTY01000156.1 4847 4719 -2 - 129 hypothetical protein - none -
fig|6666666.229919.peg.1054 CDS AZTY01000156.1 5333 5061 -2 - 273 FIG00904058: hypothetical protein - none -
fig|6666666.229919.peg.1055 CDS AZTY01000156.1 5545 5333 -1 - 213 FIG003276: zinc-binding protein - none -
fig|6666666.229919.peg.1056 CDS AZTY01000156.1 6158 5535 -2 - 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229919.peg.1057 CDS AZTY01000157.1 1118 651 -2 - 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229919.peg.1058 CDS AZTY01000157.1 2413 1133 -1 - 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229919.peg.1059 CDS AZTY01000157.1 3596 2448 -2 - 1149 TolA protein Ton and Tol transport systems
fig|6666666.229919.peg.1060 CDS AZTY01000157.1 4035 3613 -3 - 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229919.peg.1061 CDS AZTY01000157.1 4810 4121 -1 - 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229919.peg.1062 CDS AZTY01000157.1 5244 4840 -3 - 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229919.peg.1063 CDS AZTY01000157.1 6202 5762 -1 - 441 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229919.peg.1064 CDS AZTY01000158.1 1082 948 -2 - 135 hypothetical protein - none -
fig|6666666.229919.peg.1065 CDS AZTY01000159.1 66 1160 3 + 1095 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229919.peg.1066 CDS AZTY01000159.1 1172 1513 2 + 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229919.peg.1067 CDS AZTY01000159.1 1513 1707 1 + 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229919.peg.1068 CDS AZTY01000159.1 2068 1841 -1 - 228 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.229919.peg.1069 CDS AZTY01000160.1 65 205 2 + 141 hypothetical protein - none -
fig|6666666.229919.peg.1070 CDS AZTY01000160.1 850 236 -1 - 615 Mlr7403 protein - none -
fig|6666666.229919.peg.1071 CDS AZTY01000160.1 2138 861 -2 - 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.229919.peg.1072 CDS AZTY01000160.1 3263 2160 -2 - 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229919.peg.1073 CDS AZTY01000160.1 4330 3275 -1 - 1056 FIG021952: putative membrane protein - none -
fig|6666666.229919.peg.1074 CDS AZTY01000160.1 5024 4473 -2 - 552 Type IV pilus biogenesis protein PilF - none -
fig|6666666.229919.peg.1075 CDS AZTY01000160.1 6185 5046 -2 - 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) RNA methylation
fig|6666666.229919.peg.1076 CDS AZTY01000160.1 6312 6425 3 + 114 hypothetical protein - none -
fig|6666666.229919.peg.1077 CDS AZTY01000160.1 6480 7529 3 + 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229919.peg.1078 CDS AZTY01000160.1 8995 7631 -1 - 1365 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229919.peg.1079 CDS AZTY01000160.1 10329 9088 -3 - 1242 Serine transporter Pyruvate Alanine Serine Interconversions
fig|6666666.229919.peg.1080 CDS AZTY01000160.1 10986 10486 -3 - 501 Protein sprT - none -
fig|6666666.229919.peg.1081 CDS AZTY01000161.1 982 2451 1 + 1470 Sodium-dependent transporter - none -
fig|6666666.229919.peg.1082 CDS AZTY01000161.1 2463 3062 3 + 600 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Phosphoglycerate mutase protein family
fig|6666666.229919.peg.1083 CDS AZTY01000161.1 3248 3412 2 + 165 hypothetical protein - none -
fig|6666666.229919.peg.1084 CDS AZTY01000161.1 3648 3457 -3 - 192 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229919.peg.1085 CDS AZTY01000161.1 3799 4281 1 + 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229919.peg.1086 CDS AZTY01000161.1 4555 4364 -1 - 192 hypothetical protein - none -
fig|6666666.229919.peg.1087 CDS AZTY01000161.1 5157 4570 -3 - 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229919.peg.1088 CDS AZTY01000161.1 5624 5343 -2 - 282 hypothetical protein - none -
fig|6666666.229919.peg.1089 CDS AZTY01000161.1 5886 6623 3 + 738 Putative preQ0 transporter - none -
fig|6666666.229919.peg.1090 CDS AZTY01000161.1 7660 6692 -1 - 969 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229919.peg.1091 CDS AZTY01000162.1 29 1516 2 + 1488 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229919.peg.1092 CDS AZTY01000162.1 1519 2409 1 + 891 hypothetical protein - none -
fig|6666666.229919.peg.1093 CDS AZTY01000162.1 2553 3506 3 + 954 Glycosyltransferase - none -
fig|6666666.229919.peg.1094 CDS AZTY01000163.1 1662 358 -3 - 1305 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229919.peg.1095 CDS AZTY01000163.1 2634 2068 -3 - 567 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229919.peg.1096 CDS AZTY01000164.1 150 16 -3 - 135 hypothetical protein - none -
fig|6666666.229919.peg.1097 CDS AZTY01000164.1 448 155 -1 - 294 hypothetical protein - none -
fig|6666666.229919.peg.1098 CDS AZTY01000166.1 2023 92 -1 - 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229919.peg.1099 CDS AZTY01000168.1 6 749 3 + 744 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229919.peg.1100 CDS AZTY01000168.1 1477 836 -1 - 642 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229919.peg.1101 CDS AZTY01000168.1 2889 1486 -3 - 1404 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229919.peg.1102 CDS AZTY01000168.1 3746 2901 -2 - 846 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229919.peg.1103 CDS AZTY01000168.1 4702 3758 -1 - 945 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229919.peg.1104 CDS AZTY01000168.1 5749 4757 -1 - 993 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229919.peg.1105 CDS AZTY01000168.1 6462 7145 3 + 684 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229919.peg.1106 CDS AZTY01000168.1 7157 7762 2 + 606 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229919.peg.1107 CDS AZTY01000168.1 7786 10161 1 + 2376 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229919.peg.1108 CDS AZTY01000168.1 10176 10931 3 + 756 Hexuronate utilization operon transcriptional repressor ExuR D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229919.peg.1109 CDS AZTY01000168.1 10951 12135 1 + 1185 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229919.peg.1110 CDS AZTY01000168.1 12161 13096 2 + 936 hypothetical protein - none -
fig|6666666.229919.peg.1111 CDS AZTY01000168.1 13252 14043 1 + 792 Permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229919.peg.1112 CDS AZTY01000168.1 14893 14069 -1 - 825 Putative sulfate permease - none -
fig|6666666.229919.peg.1113 CDS AZTY01000170.1 189 2036 3 + 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229919.peg.1114 CDS AZTY01000170.1 2171 2797 2 + 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) pyrimidine conversions
fig|6666666.229919.peg.1115 CDS AZTY01000170.1 2921 4174 2 + 1254 Uracil permease - none -
fig|6666666.229919.peg.1116 CDS AZTY01000170.1 4314 4171 -3 - 144 hypothetical protein - none -
fig|6666666.229919.peg.1117 CDS AZTY01000170.1 4294 4998 1 + 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229919.peg.1118 CDS AZTY01000170.1 5159 5004 -2 - 156 hypothetical protein - none -
fig|6666666.229919.peg.1119 CDS AZTY01000171.1 50 415 2 + 366 Cell division protein - none -
fig|6666666.229919.peg.1120 CDS AZTY01000171.1 616 1182 1 + 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229919.peg.1121 CDS AZTY01000171.1 1208 2404 2 + 1197 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229919.peg.1122 CDS AZTY01000171.1 2418 5516 3 + 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229919.peg.1123 CDS AZTY01000171.1 5631 5506 -3 - 126 hypothetical protein - none -
fig|6666666.229919.peg.1124 CDS AZTY01000171.1 5670 6287 3 + 618 Orf2 - none -
fig|6666666.229919.peg.1125 CDS AZTY01000171.1 6300 6470 3 + 171 Orf2 - none -
fig|6666666.229919.peg.1126 CDS AZTY01000171.1 7148 6489 -2 - 660 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229919.peg.1127 CDS AZTY01000171.1 7520 7164 -2 - 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1128 CDS AZTY01000171.1 9777 7546 -3 - 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229919.peg.1129 CDS AZTY01000171.1 11103 9787 -3 - 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229919.peg.1130 CDS AZTY01000171.1 11452 11105 -1 - 348 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229919.peg.1131 CDS AZTY01000172.1 93 479 3 + 387 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229919.peg.1132 CDS AZTY01000172.1 479 991 2 + 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis;
Transport system clustering with HemG
fig|6666666.229919.peg.1133 CDS AZTY01000173.1 271 113 -1 - 159 hypothetical protein - none -
fig|6666666.229919.peg.1134 CDS AZTY01000173.1 728 874 2 + 147 hypothetical protein - none -
fig|6666666.229919.peg.1135 CDS AZTY01000173.1 1862 1206 -2 - 657 Mobile element protein - none -
fig|6666666.229919.peg.1136 CDS AZTY01000174.1 6 650 3 + 645 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229919.peg.1137 CDS AZTY01000174.1 1156 3576 1 + 2421 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229919.peg.1138 CDS AZTY01000174.1 3587 4204 2 + 618 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229919.peg.1139 CDS AZTY01000174.1 4306 4181 -1 - 126 hypothetical protein - none -
fig|6666666.229919.peg.1140 CDS AZTY01000175.1 6 968 3 + 963 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC - none -
fig|6666666.229919.peg.1141 CDS AZTY01000175.1 982 1986 1 + 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD - none -
fig|6666666.229919.peg.1142 CDS AZTY01000176.1 219 536 3 + 318 Flp pilus assembly surface protein TadF, ATP/GTP-binding motif Widespread colonization island
fig|6666666.229919.peg.1143 CDS AZTY01000176.1 552 2162 3 + 1611 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229919.peg.1144 CDS AZTY01000176.1 2330 2569 2 + 240 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229919.peg.1145 CDS AZTY01000177.1 285 10 -3 - 276 Mobile element protein - none -
fig|6666666.229919.peg.1146 CDS AZTY01000178.1 725 231 -2 - 495 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA YjeE
fig|6666666.229919.peg.1147 CDS AZTY01000178.1 2674 881 -1 - 1794 Mlr4739 protein - none -
fig|6666666.229919.peg.1148 CDS AZTY01000178.1 3982 3062 -1 - 921 RfbJ protein - none -
fig|6666666.229919.peg.1149 CDS AZTY01000178.1 5498 3990 -2 - 1509 putative integral membrane protein - none -
fig|6666666.229919.peg.1150 CDS AZTY01000178.1 6102 5485 -3 - 618 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1151 CDS AZTY01000178.1 7756 6131 -1 - 1626 Dca - none -
fig|6666666.229919.peg.1152 CDS AZTY01000178.1 8979 8158 -3 - 822 probable phage integrase - none -
fig|6666666.229919.peg.1153 CDS AZTY01000178.1 10973 9063 -2 - 1911 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229919.peg.1154 CDS AZTY01000178.1 11267 11446 2 + 180 Haemophilus-specific protein, uncharacterized - none -
fig|6666666.229919.peg.1155 CDS AZTY01000178.1 11760 11939 3 + 180 hypothetical protein - none -
fig|6666666.229919.peg.1156 CDS AZTY01000178.1 12510 12764 3 + 255 hypothetical protein - none -
fig|6666666.229919.peg.1157 CDS AZTY01000178.1 12767 13111 2 + 345 Programmed cell death toxin MazF - none -
fig|6666666.229919.peg.1158 CDS AZTY01000178.1 13676 14344 2 + 669 Cytolethal distending toxin subunit A Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229919.peg.1159 CDS AZTY01000178.1 14359 15210 1 + 852 Cytolethal distending toxin subunit B Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229919.peg.1160 CDS AZTY01000178.1 15221 15781 2 + 561 Cytolethal distending toxin subunit C Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229919.peg.1161 CDS AZTY01000178.1 17149 16388 -1 - 762 DUF1526 domain-containing protein - none -
fig|6666666.229919.peg.1162 CDS AZTY01000178.1 17851 17964 1 + 114 hypothetical protein - none -
fig|6666666.229919.peg.1163 CDS AZTY01000178.1 18199 18522 1 + 324 FIG00696053: hypothetical protein - none -
fig|6666666.229919.peg.1164 CDS AZTY01000178.1 18522 18761 3 + 240 hypothetical protein - none -
fig|6666666.229919.peg.1165 CDS AZTY01000178.1 18778 19185 1 + 408 FIG00696269: hypothetical protein - none -
fig|6666666.229919.peg.1166 CDS AZTY01000178.1 19204 19575 1 + 372 FIG00696467: hypothetical protein - none -
fig|6666666.229919.peg.1167 CDS AZTY01000178.1 19587 20219 3 + 633 Possible exported protein - none -
fig|6666666.229919.peg.1168 CDS AZTY01000178.1 20219 21079 2 + 861 FIG00698030: hypothetical protein - none -
fig|6666666.229919.peg.1169 CDS AZTY01000178.1 21090 22478 3 + 1389 putative exported protein - none -
fig|6666666.229919.peg.1170 CDS AZTY01000178.1 22487 22894 2 + 408 putative lipoprotein - none -
fig|6666666.229919.peg.1171 CDS AZTY01000179.1 597 2072 3 + 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229919.peg.1172 CDS AZTY01000179.1 2189 2836 2 + 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229919.peg.1173 CDS AZTY01000179.1 2852 3550 2 + 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229919.peg.1174 CDS AZTY01000179.1 5309 4761 -2 - 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229919.peg.1175 CDS AZTY01000179.1 5381 6421 2 + 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229919.peg.1176 CDS AZTY01000179.1 6642 6899 3 + 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229919.peg.1177 CDS AZTY01000179.1 7016 8743 2 + 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229919.peg.1178 CDS AZTY01000179.1 8804 9304 2 + 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229919.peg.1179 CDS AZTY01000179.1 11469 9430 -3 - 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229919.peg.1180 CDS AZTY01000179.1 11611 11976 1 + 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229919.peg.1181 CDS AZTY01000179.1 12032 12427 2 + 396 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229919.peg.1182 CDS AZTY01000179.1 12500 13570 2 + 1071 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229919.peg.1183 CDS AZTY01000180.1 73 1071 1 + 999 hypothetical protein - none -
fig|6666666.229919.peg.1185 CDS AZTY01000180.1 4335 2113 -3 - 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229919.peg.1187 CDS AZTY01000180.1 5640 4468 -3 - 1173 cell filamentation protein Fic-related protein - none -
fig|6666666.229919.peg.1188 CDS AZTY01000180.1 6229 5768 -1 - 462 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) Hydrogenases
fig|6666666.229919.peg.1189 CDS AZTY01000180.1 6623 6219 -2 - 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229919.peg.1190 CDS AZTY01000180.1 7079 6705 -2 - 375 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229919.peg.1191 CDS AZTY01000181.1 1236 493 -3 - 744 3-oxoacyl-[ACP] synthase - none -
fig|6666666.229919.peg.1192 CDS AZTY01000181.1 1589 1266 -2 - 324 hypothetical protein - none -
fig|6666666.229919.peg.1193 CDS AZTY01000181.1 1617 2042 3 + 426 Excinuclease ATPase subunit - none -
fig|6666666.229919.peg.1194 CDS AZTY01000181.1 2743 2144 -1 - 600 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229919.peg.1195 CDS AZTY01000182.1 1647 457 -3 - 1191 hypothetical protein - none -
fig|6666666.229919.peg.1196 CDS AZTY01000182.1 3271 1667 -1 - 1605 hypothetical protein - none -
fig|6666666.229919.peg.1197 CDS AZTY01000183.1 23 301 2 + 279 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229919.peg.1198 CDS AZTY01000183.1 336 1178 3 + 843 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229919.peg.1199 CDS AZTY01000183.1 1284 1781 3 + 498 Phospholipid-binding protein - none -
fig|6666666.229919.peg.1200 CDS AZTY01000183.1 1900 2376 1 + 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) Biotin synthesis cluster;
RNA methylation
fig|6666666.229919.peg.1201 CDS AZTY01000183.1 3347 2472 -2 - 876 Membrane protein LAPB - none -
fig|6666666.229919.peg.1202 CDS AZTY01000183.1 3470 3357 -2 - 114 hypothetical protein - none -
fig|6666666.229919.peg.1203 CDS AZTY01000184.1 1990 2103 1 + 114 hypothetical protein - none -
fig|6666666.229919.peg.1204 CDS AZTY01000184.1 3137 2100 -2 - 1038 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229919.peg.1205 CDS AZTY01000184.1 3278 4102 2 + 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229919.peg.1206 CDS AZTY01000184.1 4216 5163 1 + 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229919.peg.1207 CDS AZTY01000184.1 5241 5128 -3 - 114 hypothetical protein - none -
fig|6666666.229919.peg.1208 CDS AZTY01000184.1 5529 5383 -3 - 147 hypothetical protein - none -
fig|6666666.229919.peg.1209 CDS AZTY01000185.1 121 264 1 + 144 hypothetical protein - none -
fig|6666666.229919.peg.1210 CDS AZTY01000185.1 3515 858 -2 - 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229919.peg.1211 CDS AZTY01000185.1 3894 4769 3 + 876 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229919.peg.1212 CDS AZTY01000185.1 7003 4922 -1 - 2082 Transcriptional activator of maltose regulon, MalT Maltose utilization cluster
fig|6666666.229919.peg.1213 CDS AZTY01000186.1 54 527 3 + 474 Nitrate/nitrite response regulator protein - none -
fig|6666666.229919.peg.1214 CDS AZTY01000186.1 595 2454 1 + 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229919.peg.1215 CDS AZTY01000187.1 107 3568 2 + 3462 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229919.peg.1216 CDS AZTY01000187.1 3571 5118 1 + 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229919.peg.1217 CDS AZTY01000187.1 5533 5183 -1 - 351 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229919.peg.1218 CDS AZTY01000188.1 110 865 2 + 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229919.peg.1219 CDS AZTY01000189.1 11 778 2 + 768 FIG00904191: hypothetical protein - none -
fig|6666666.229919.peg.1220 CDS AZTY01000189.1 912 1961 3 + 1050 Putative membrane protein YeiH - none -
fig|6666666.229919.peg.1221 CDS AZTY01000189.1 2129 4438 2 + 2310 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Peptidoglycan Biosynthesis
fig|6666666.229919.peg.1222 CDS AZTY01000190.1 18 797 3 + 780 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229919.peg.1223 CDS AZTY01000190.1 2692 923 -1 - 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229919.peg.1224 CDS AZTY01000190.1 3170 2925 -2 - 246 FIG00696862: hypothetical protein - none -
fig|6666666.229919.peg.1225 CDS AZTY01000190.1 4698 3361 -3 - 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229919.peg.1226 CDS AZTY01000190.1 5613 4786 -3 - 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229919.peg.1227 CDS AZTY01000190.1 5900 5784 -2 - 117 hypothetical protein - none -
fig|6666666.229919.peg.1228 CDS AZTY01000190.1 5970 7553 3 + 1584 Peptide chain release factor 3 - none -
fig|6666666.229919.peg.1229 CDS AZTY01000190.1 7740 8090 3 + 351 YPPCP.09C homologue - none -
fig|6666666.229919.peg.1230 CDS AZTY01000190.1 8087 8386 2 + 300 Putative transcriptional regulator - none -
fig|6666666.229919.peg.1231 CDS AZTY01000190.1 10260 8422 -3 - 1839 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229919.peg.1232 CDS AZTY01000191.1 167 30 -2 - 138 hypothetical protein - none -
fig|6666666.229919.peg.1233 CDS AZTY01000191.1 964 185 -1 - 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229919.peg.1234 CDS AZTY01000191.1 1340 1819 2 + 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229919.peg.1235 CDS AZTY01000191.1 2026 1820 -1 - 207 hypothetical protein - none -
fig|6666666.229919.peg.1236 CDS AZTY01000191.1 2295 2648 3 + 354 LSU ribosomal protein L20p - none -
fig|6666666.229919.peg.1237 CDS AZTY01000191.1 3534 3415 -3 - 120 hypothetical protein - none -
fig|6666666.229919.peg.1238 CDS AZTY01000191.1 3625 4578 1 + 954 Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) Lactose and Galactose Uptake and Utilization
fig|6666666.229919.peg.1239 CDS AZTY01000191.1 4593 6794 3 + 2202 PTS system, galactitol-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.229919.peg.1240 CDS AZTY01000191.1 6817 7797 1 + 981 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) - none -
fig|6666666.229919.peg.1241 CDS AZTY01000191.1 7864 8622 1 + 759 Galactitol utilization operon repressor - none -
fig|6666666.229919.peg.1242 CDS AZTY01000191.1 9260 8742 -2 - 519 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229919.peg.1243 CDS AZTY01000192.1 7 219 1 + 213 Biotin carboxyl carrier protein of acetyl-CoA carboxylase - none -
fig|6666666.229919.peg.1244 CDS AZTY01000192.1 263 1609 2 + 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) - none -
fig|6666666.229919.peg.1245 CDS AZTY01000192.1 1718 1852 2 + 135 hypothetical protein - none -
fig|6666666.229919.peg.1246 CDS AZTY01000192.1 1907 2668 2 + 762 Periplasmic protein TonB, links inner and outer membranes - none -
fig|6666666.229919.peg.1247 CDS AZTY01000192.1 2787 4175 3 + 1389 FOG: TPR repeat - none -
fig|6666666.229919.peg.1248 CDS AZTY01000192.1 4184 4471 2 + 288 FIG003021: Membrane protein - none -
fig|6666666.229919.peg.1249 CDS AZTY01000193.1 1375 290 -1 - 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229919.peg.1250 CDS AZTY01000193.1 2748 1369 -3 - 1380 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229919.peg.1251 CDS AZTY01000193.1 4219 2753 -1 - 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229919.peg.1252 CDS AZTY01000193.1 5736 4237 -3 - 1500 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229919.peg.1253 CDS AZTY01000194.1 1168 143 -1 - 1026 hypothetical protein - none -
fig|6666666.229919.peg.1254 CDS AZTY01000194.1 1426 1181 -1 - 246 hypothetical protein - none -
fig|6666666.229919.peg.1255 CDS AZTY01000195.1 297 1229 3 + 933 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229919.peg.1256 CDS AZTY01000195.1 1316 1519 2 + 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229919.peg.1257 CDS AZTY01000196.1 81 1001 3 + 921 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229919.peg.1258 CDS AZTY01000196.1 1163 2377 2 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229919.peg.1259 CDS AZTY01000196.1 3120 2443 -3 - 678 YheO-like PAS domain - none -
fig|6666666.229919.peg.1260 CDS AZTY01000196.1 3689 3183 -2 - 507 Arabinose efflux permease - none -
fig|6666666.229919.peg.1261 CDS AZTY01000196.1 4413 3682 -3 - 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229919.peg.1262 CDS AZTY01000196.1 4524 5267 3 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1263 CDS AZTY01000197.1 906 1046 3 + 141 hypothetical protein - none -
fig|6666666.229919.peg.1264 CDS AZTY01000197.1 1258 1043 -1 - 216 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229919.peg.1265 CDS AZTY01000197.1 1408 1289 -1 - 120 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229919.peg.1266 CDS AZTY01000197.1 1557 1402 -3 - 156 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229919.peg.1267 CDS AZTY01000197.1 1682 1554 -2 - 129 hypothetical protein - none -
fig|6666666.229919.peg.1268 CDS AZTY01000197.1 1645 1884 1 + 240 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229919.peg.1269 CDS AZTY01000197.1 1913 2161 2 + 249 FIG01200701: hypothetical protein - none -
fig|6666666.229919.peg.1270 CDS AZTY01000197.1 2212 3483 1 + 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229919.peg.1271 CDS AZTY01000198.1 18 434 3 + 417 Probable phospholipase protein - none -
fig|6666666.229919.peg.1272 CDS AZTY01000199.1 1241 384 -2 - 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229919.peg.1273 CDS AZTY01000199.1 2120 1353 -2 - 768 Triosephosphate isomerase (EC 5.3.1.1) - none -
fig|6666666.229919.peg.1274 CDS AZTY01000199.1 2293 2736 1 + 444 Histone acetyltransferase HPA2 and related acetyltransferases - none -
fig|6666666.229919.peg.1275 CDS AZTY01000199.1 4177 2810 -1 - 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229919.peg.1276 CDS AZTY01000199.1 4630 4196 -1 - 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229919.peg.1277 CDS AZTY01000199.1 5203 4643 -1 - 561 Protein of unknown function DUF414 - none -
fig|6666666.229919.peg.1278 CDS AZTY01000200.1 60 212 3 + 153 hypothetical protein - none -
fig|6666666.229919.peg.1279 CDS AZTY01000200.1 252 1082 3 + 831 hypothetical protein - none -
fig|6666666.229919.peg.1280 CDS AZTY01000200.1 1228 1350 1 + 123 hypothetical protein - none -
fig|6666666.229919.peg.1281 CDS AZTY01000200.1 1654 2205 1 + 552 hypothetical protein - none -
fig|6666666.229919.peg.1282 CDS AZTY01000200.1 2371 2625 1 + 255 Mobile element protein - none -
fig|6666666.229919.peg.1283 CDS AZTY01000200.1 3439 2723 -1 - 717 COG1720: Uncharacterized conserved protein tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229919.peg.1284 CDS AZTY01000200.1 3569 4513 2 + 945 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229919.peg.1285 CDS AZTY01000200.1 4564 5064 1 + 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229919.peg.1286 CDS AZTY01000200.1 5085 5249 3 + 165 hypothetical protein - none -
fig|6666666.229919.peg.1287 CDS AZTY01000200.1 5254 6645 1 + 1392 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229919.peg.1288 CDS AZTY01000200.1 7236 6703 -3 - 534 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229919.peg.1289 CDS AZTY01000200.1 7353 8714 3 + 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229919.peg.1290 CDS AZTY01000200.1 8953 9492 1 + 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229919.peg.1291 CDS AZTY01000200.1 10702 9563 -1 - 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1292 CDS AZTY01000200.1 11973 10699 -3 - 1275 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229919.peg.1293 CDS AZTY01000200.1 13208 12105 -2 - 1104 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229919.peg.1294 CDS AZTY01000200.1 13456 13301 -1 - 156 Mobile element protein - none -
fig|6666666.229919.peg.1295 CDS AZTY01000200.1 13513 14124 1 + 612 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229919.peg.1296 CDS AZTY01000200.1 15994 14207 -1 - 1788 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229919.peg.1297 CDS AZTY01000200.1 17023 16121 -1 - 903 Lipoprotein nlpI precursor - none -
fig|6666666.229919.peg.1298 CDS AZTY01000200.1 19339 17108 -1 - 2232 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.229919.peg.1299 CDS AZTY01000200.1 19531 20001 1 + 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229919.peg.1300 CDS AZTY01000200.1 21116 20475 -2 - 642 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229919.peg.1301 CDS AZTY01000200.1 21151 21603 1 + 453 Type IV pilin PilA - none -
fig|6666666.229919.peg.1302 CDS AZTY01000201.1 1401 907 -3 - 495 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229919.peg.1303 CDS AZTY01000202.1 102 278 3 + 177 hypothetical protein - none -
fig|6666666.229919.peg.1304 CDS AZTY01000202.1 265 894 1 + 630 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - none -
fig|6666666.229919.peg.1305 CDS AZTY01000202.1 2395 2171 -1 - 225 hypothetical protein - none -
fig|6666666.229919.peg.1306 CDS AZTY01000202.1 2916 2590 -3 - 327 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229919.peg.1307 CDS AZTY01000202.1 3156 3557 3 + 402 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229919.peg.1308 CDS AZTY01000202.1 3703 3566 -1 - 138 hypothetical protein - none -
fig|6666666.229919.peg.1309 CDS AZTY01000202.1 4040 3762 -2 - 279 hypothetical protein - none -
fig|6666666.229919.peg.1310 CDS AZTY01000202.1 5726 4062 -2 - 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229919.peg.1311 CDS AZTY01000202.1 6672 5731 -3 - 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229919.peg.1312 CDS AZTY01000202.1 8204 6675 -2 - 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229919.peg.1313 CDS AZTY01000202.1 8846 8316 -2 - 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229919.peg.1314 CDS AZTY01000202.1 9529 8945 -1 - 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229919.peg.1315 CDS AZTY01000202.1 9613 9879 1 + 267 Protein yihD - none -
fig|6666666.229919.peg.1316 CDS AZTY01000202.1 9898 10515 1 + 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229919.peg.1317 CDS AZTY01000202.1 10575 10904 3 + 330 Protein yifE - none -
fig|6666666.229919.peg.1318 CDS AZTY01000202.1 10974 12071 3 + 1098 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) RNA methylation;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229919.peg.1319 CDS AZTY01000202.1 12073 12831 1 + 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229919.peg.1320 CDS AZTY01000202.1 12923 13258 2 + 336 hypothetical protein - none -
fig|6666666.229919.peg.1321 CDS AZTY01000202.1 13313 14686 2 + 1374 hypothetical protein - none -
fig|6666666.229919.peg.1322 CDS AZTY01000203.1 14 871 2 + 858 hypothetical protein - none -
fig|6666666.229919.peg.1323 CDS AZTY01000203.1 864 3098 3 + 2235 hypothetical protein - none -
fig|6666666.229919.peg.1324 CDS AZTY01000203.1 3077 4261 2 + 1185 hypothetical protein - none -
fig|6666666.229919.peg.1325 CDS AZTY01000203.1 6450 4336 -3 - 2115 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229919.peg.1326 CDS AZTY01000204.1 700 302 -1 - 399 Integrase - none -
fig|6666666.229919.peg.1327 CDS AZTY01000204.1 1727 1500 -2 - 228 FIG00354920: hypothetical protein - none -
fig|6666666.229919.peg.1328 CDS AZTY01000204.1 3274 1724 -1 - 1551 Putative uncharacterized protein ydbH - none -
fig|6666666.229919.peg.1329 CDS AZTY01000205.1 45 191 3 + 147 SanA protein - none -
fig|6666666.229919.peg.1330 CDS AZTY01000205.1 1161 175 -3 - 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229919.peg.1331 CDS AZTY01000206.1 2 736 2 + 735 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229919.peg.1332 CDS AZTY01000206.1 767 1957 2 + 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229919.peg.1333 CDS AZTY01000206.1 2030 2329 2 + 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229919.peg.1334 CDS AZTY01000206.1 2375 3013 2 + 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229919.peg.1335 CDS AZTY01000206.1 3078 4040 3 + 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229919.peg.1336 CDS AZTY01000206.1 4467 4249 -3 - 219 hypothetical protein - none -
fig|6666666.229919.peg.1337 CDS AZTY01000206.1 4661 4783 2 + 123 hypothetical protein - none -
fig|6666666.229919.peg.1338 CDS AZTY01000207.1 440 553 2 + 114 hypothetical protein - none -
fig|6666666.229919.peg.1339 CDS AZTY01000207.1 1009 515 -1 - 495 Protein yfbU - none -
fig|6666666.229919.peg.1340 CDS AZTY01000207.1 1803 1027 -3 - 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229919.peg.1341 CDS AZTY01000207.1 3452 1869 -2 - 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229919.peg.1342 CDS AZTY01000207.1 4849 3518 -1 - 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229919.peg.1343 CDS AZTY01000207.1 5397 4870 -3 - 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229919.peg.1344 CDS AZTY01000207.1 5612 6319 2 + 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229919.peg.1345 CDS AZTY01000207.1 6523 6407 -1 - 117 hypothetical protein - none -
fig|6666666.229919.peg.1346 CDS AZTY01000207.1 6982 6701 -1 - 282 hypothetical protein - none -
fig|6666666.229919.peg.1347 CDS AZTY01000207.1 7271 6954 -2 - 318 hypothetical protein - none -
fig|6666666.229919.peg.1348 CDS AZTY01000207.1 8539 7295 -1 - 1245 Tryptophan-specific transport protein - none -
fig|6666666.229919.peg.1349 CDS AZTY01000207.1 8701 9228 1 + 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229919.peg.1350 CDS AZTY01000207.1 9304 10077 1 + 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229919.peg.1351 CDS AZTY01000207.1 10923 10165 -3 - 759 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229919.peg.1352 CDS AZTY01000207.1 11379 10933 -3 - 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229919.peg.1353 CDS AZTY01000207.1 11853 11383 -3 - 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229919.peg.1354 CDS AZTY01000207.1 13290 12028 -3 - 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229919.peg.1355 CDS AZTY01000207.1 14159 13365 -2 - 795 FIG001154: CcsA-related protein - none -
fig|6666666.229919.peg.1356 CDS AZTY01000207.1 14313 15692 3 + 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229919.peg.1357 CDS AZTY01000207.1 15979 15860 -1 - 120 hypothetical protein - none -
fig|6666666.229919.peg.1358 CDS AZTY01000207.1 17162 16332 -2 - 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229919.peg.1359 CDS AZTY01000207.1 18299 17175 -2 - 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229919.peg.1360 CDS AZTY01000207.1 18437 18844 2 + 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229919.peg.1361 CDS AZTY01000207.1 19707 18958 -3 - 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229919.peg.1362 CDS AZTY01000207.1 19813 19688 -1 - 126 hypothetical protein - none -
fig|6666666.229919.peg.1363 CDS AZTY01000207.1 21296 19929 -2 - 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229919.peg.1364 CDS AZTY01000207.1 21931 21320 -1 - 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229919.peg.1365 CDS AZTY01000207.1 22044 22454 3 + 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229919.peg.1366 CDS AZTY01000207.1 22593 23129 3 + 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR pyrimidine conversions
fig|6666666.229919.peg.1367 CDS AZTY01000207.1 23196 24128 3 + 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229919.peg.1368 CDS AZTY01000207.1 24206 25069 2 + 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229919.peg.1369 CDS AZTY01000207.1 25085 25912 2 + 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229919.peg.1370 CDS AZTY01000207.1 26003 26422 2 + 420 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229919.peg.1371 CDS AZTY01000207.1 26406 26699 3 + 294 nucleotidyltransferase - none -
fig|6666666.229919.peg.1372 CDS AZTY01000207.1 26727 27284 3 + 558 FIG00696423: hypothetical protein - none -
fig|6666666.229919.peg.1373 CDS AZTY01000207.1 27239 27355 2 + 117 hypothetical protein - none -
fig|6666666.229919.peg.1374 CDS AZTY01000207.1 27327 27497 3 + 171 hypothetical protein - none -
fig|6666666.229919.peg.1375 CDS AZTY01000207.1 27475 30063 1 + 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229919.peg.1376 CDS AZTY01000207.1 30216 30088 -3 - 129 hypothetical protein - none -
fig|6666666.229919.peg.1377 CDS AZTY01000207.1 30205 30708 1 + 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.1378 CDS AZTY01000207.1 30708 31742 3 + 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229919.peg.1379 CDS AZTY01000208.1 1021 95 -1 - 927 Lysophospholipid acyltransferase - none -
fig|6666666.229919.peg.1380 CDS AZTY01000208.1 1503 1018 -3 - 486 FIG143263: Glycosyl transferase - none -
fig|6666666.229919.peg.1381 CDS AZTY01000209.1 2896 557 -1 - 2340 Helicase PriA essential for oriC/DnaA-independent DNA replication - none -
fig|6666666.229919.peg.1382 CDS AZTY01000209.1 2982 3845 3 + 864 Involved in lipopolysaccharide biosynthesis - none -
fig|6666666.229919.peg.1383 CDS AZTY01000209.1 4856 3852 -2 - 1005 putative capsular polysaccharide synthesis protein - none -
fig|6666666.229919.peg.1384 CDS AZTY01000209.1 5713 4865 -1 - 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229919.peg.1385 CDS AZTY01000209.1 5971 6183 1 + 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent - none -
fig|6666666.229919.peg.1386 CDS AZTY01000209.1 6246 6938 3 + 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229919.peg.1387 CDS AZTY01000209.1 6939 7961 3 + 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229919.peg.1388 CDS AZTY01000209.1 7971 9023 3 + 1053 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229919.peg.1389 CDS AZTY01000209.1 9883 9026 -1 - 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229919.peg.1390 CDS AZTY01000209.1 10093 9923 -1 - 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent - none -
fig|6666666.229919.peg.1391 CDS AZTY01000209.1 10278 10105 -3 - 174 LSU ribosomal protein L28p - none -
fig|6666666.229919.peg.1392 CDS AZTY01000209.1 11187 10528 -3 - 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229919.peg.1393 CDS AZTY01000209.1 11390 11238 -2 - 153 hypothetical protein - none -
fig|6666666.229919.peg.1394 CDS AZTY01000210.1 19 156 1 + 138 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229919.peg.1395 CDS AZTY01000210.1 576 1100 3 + 525 Flavodoxin 1 Flavodoxin
fig|6666666.229919.peg.1396 CDS AZTY01000210.1 1119 1559 3 + 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229919.peg.1397 CDS AZTY01000210.1 1727 4390 2 + 2664 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229919.peg.1398 CDS AZTY01000210.1 4458 4808 3 + 351 FIG00782386: hypothetical protein - none -
fig|6666666.229919.peg.1399 CDS AZTY01000210.1 5159 4842 -2 - 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229919.peg.1400 CDS AZTY01000210.1 5857 5165 -1 - 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) - none -
fig|6666666.229919.peg.1401 CDS AZTY01000210.1 6303 5887 -3 - 417 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229919.peg.1402 CDS AZTY01000211.1 1229 600 -2 - 630 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229919.peg.1403 CDS AZTY01000211.1 2233 1364 -1 - 870 Formyltetrahydrofolate deformylase (EC 3.5.1.10) One-carbon metabolism by tetrahydropterines
fig|6666666.229919.peg.1404 CDS AZTY01000211.1 2668 2270 -1 - 399 DNA-binding protein H-NS - none -
fig|6666666.229919.peg.1405 CDS AZTY01000212.1 143 670 2 + 528 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis
fig|6666666.229919.peg.1406 CDS AZTY01000212.1 639 770 3 + 132 hypothetical protein - none -
fig|6666666.229919.peg.1407 CDS AZTY01000212.1 794 2332 2 + 1539 Maltose/maltodextrin ABC transporter, permease protein MalF - none -
fig|6666666.229919.peg.1408 CDS AZTY01000213.1 376 188 -1 - 189 hypothetical protein - none -
fig|6666666.229919.peg.1409 CDS AZTY01000213.1 757 1596 1 + 840 Predicted transcriptional regulator of the myo-inositol catabolic operon - none -
fig|6666666.229919.peg.1410 CDS AZTY01000213.1 3543 1633 -3 - 1911 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain - none -
fig|6666666.229919.peg.1411 CDS AZTY01000213.1 3854 5800 2 + 1947 Epi-inositol hydrolase (EC 3.7.1.-) - none -
fig|6666666.229919.peg.1412 CDS AZTY01000214.1 17 691 2 + 675 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229919.peg.1413 CDS AZTY01000214.1 783 1532 3 + 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229919.peg.1414 CDS AZTY01000214.1 1573 2433 1 + 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229919.peg.1415 CDS AZTY01000214.1 2427 3122 3 + 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229919.peg.1416 CDS AZTY01000214.1 3790 4746 1 + 957 hypothetical protein - none -
fig|6666666.229919.peg.1417 CDS AZTY01000214.1 4803 5171 3 + 369 hypothetical protein - none -
fig|6666666.229919.peg.1418 CDS AZTY01000214.1 5192 7270 2 + 2079 hypothetical protein - none -
fig|6666666.229919.peg.1419 CDS AZTY01000214.1 7283 7627 2 + 345 hypothetical protein - none -
fig|6666666.229919.peg.1420 CDS AZTY01000214.1 7627 8493 1 + 867 hypothetical protein - none -
fig|6666666.229919.peg.1421 CDS AZTY01000214.1 9777 8563 -3 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229919.peg.1422 CDS AZTY01000214.1 10072 10266 1 + 195 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229919.peg.1423 CDS AZTY01000214.1 10793 10530 -2 - 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229919.peg.1424 CDS AZTY01000215.1 124 597 1 + 474 Inner membrane protein YccF - none -
fig|6666666.229919.peg.1425 CDS AZTY01000215.1 606 2747 3 + 2142 Putative efflux (PET) family inner membrane protein YccS - none -
fig|6666666.229919.peg.1426 CDS AZTY01000215.1 3250 2744 -1 - 507 FIG001674: hypothetical protein - none -
fig|6666666.229919.peg.1427 CDS AZTY01000215.1 3313 4263 1 + 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p - none -
fig|6666666.229919.peg.1428 CDS AZTY01000215.1 5374 4430 -1 - 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229919.peg.1429 CDS AZTY01000215.1 6188 5364 -2 - 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229919.peg.1430 CDS AZTY01000215.1 7553 6198 -2 - 1356 FIG00732228: membrane protein - none -
fig|6666666.229919.peg.1431 CDS AZTY01000215.1 7839 7570 -3 - 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229919.peg.1432 CDS AZTY01000215.1 8982 8407 -3 - 576 hypothetical protein - none -
fig|6666666.229919.peg.1433 CDS AZTY01000216.1 119 697 2 + 579 hypothetical protein - none -
fig|6666666.229919.peg.1434 CDS AZTY01000216.1 1264 1896 1 + 633 hypothetical protein - none -
fig|6666666.229919.peg.1435 CDS AZTY01000216.1 3477 3343 -3 - 135 Mobile element protein - none -
fig|6666666.229919.peg.1436 CDS AZTY01000216.1 3790 3656 -1 - 135 hypothetical protein - none -
fig|6666666.229919.peg.1437 CDS AZTY01000217.1 9 1091 3 + 1083 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229919.peg.1438 CDS AZTY01000217.1 1164 2183 3 + 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) - none -
fig|6666666.229919.peg.1439 CDS AZTY01000218.1 42 191 3 + 150 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229919.peg.1440 CDS AZTY01000218.1 196 858 1 + 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229919.peg.1441 CDS AZTY01000218.1 861 1544 3 + 684 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229919.peg.1442 CDS AZTY01000218.1 2086 3684 1 + 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229919.peg.1443 CDS AZTY01000218.1 3735 4406 3 + 672 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229919.peg.1444 CDS AZTY01000218.1 4516 5484 1 + 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229919.peg.1445 CDS AZTY01000218.1 5484 5801 3 + 318 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229919.peg.1446 CDS AZTY01000218.1 5910 5788 -3 - 123 hypothetical protein - none -
fig|6666666.229919.peg.1447 CDS AZTY01000219.1 17 130 2 + 114 hypothetical protein - none -
fig|6666666.229919.peg.1448 CDS AZTY01000219.1 130 3003 1 + 2874 hypothetical protein - none -
fig|6666666.229919.peg.1449 CDS AZTY01000220.1 1968 685 -3 - 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) - none -
fig|6666666.229919.peg.1450 CDS AZTY01000220.1 3163 2045 -1 - 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) - none -
fig|6666666.229919.peg.1451 CDS AZTY01000220.1 3194 3307 2 + 114 hypothetical protein - none -
fig|6666666.229919.peg.1452 CDS AZTY01000221.1 1671 1540 -3 - 132 hypothetical protein - none -
fig|6666666.229919.peg.1453 CDS AZTY01000221.1 1775 3376 2 + 1602 Dca - none -
fig|6666666.229919.peg.1454 CDS AZTY01000222.1 143 709 2 + 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229919.peg.1455 CDS AZTY01000222.1 719 1951 2 + 1233 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229919.peg.1456 CDS AZTY01000222.1 2337 2014 -3 - 324 FIG074102: hypothetical protein - none -
fig|6666666.229919.peg.1457 CDS AZTY01000222.1 2644 2330 -1 - 315 Phage-related protein - none -
fig|6666666.229919.peg.1458 CDS AZTY01000222.1 3641 2796 -2 - 846 membrane protein, putative - none -
fig|6666666.229919.peg.1459 CDS AZTY01000222.1 5873 3714 -2 - 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229919.peg.1460 CDS AZTY01000222.1 6172 5960 -1 - 213 Copper chaperone Copper homeostasis
fig|6666666.229919.peg.1461 CDS AZTY01000222.1 6431 6652 2 + 222 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229919.peg.1462 CDS AZTY01000222.1 6713 6928 2 + 216 Mobile element protein - none -
fig|6666666.229919.peg.1463 CDS AZTY01000223.1 44 226 2 + 183 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229919.peg.1464 CDS AZTY01000223.1 410 1522 2 + 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229919.peg.1465 CDS AZTY01000223.1 2177 1596 -2 - 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229919.peg.1466 CDS AZTY01000223.1 2442 5012 3 + 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229919.peg.1467 CDS AZTY01000223.1 5140 4991 -1 - 150 hypothetical protein - none -
fig|6666666.229919.peg.1468 CDS AZTY01000223.1 5613 5113 -3 - 501 hypothetical protein - none -
fig|6666666.229919.peg.1469 CDS AZTY01000223.1 5796 6824 3 + 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229919.peg.1470 CDS AZTY01000223.1 6824 7003 2 + 180 hypothetical protein - none -
fig|6666666.229919.peg.1471 CDS AZTY01000223.1 7082 7906 2 + 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229919.peg.1472 CDS AZTY01000223.1 7916 8806 2 + 891 Tyrosine recombinase XerC - none -
fig|6666666.229919.peg.1473 CDS AZTY01000224.1 1077 2261 3 + 1185 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229919.peg.1474 CDS AZTY01000225.1 1003 401 -1 - 603 Membrane fusion component of tripartite multidrug resistance system - none -
fig|6666666.229919.peg.1475 CDS AZTY01000225.1 1561 1091 -1 - 471 Membrane fusion component of tripartite multidrug resistance system - none -
fig|6666666.229919.peg.1476 CDS AZTY01000225.1 1769 2251 2 + 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229919.peg.1477 CDS AZTY01000225.1 4349 2370 -2 - 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229919.peg.1478 CDS AZTY01000225.1 5210 4422 -2 - 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) - none -
fig|6666666.229919.peg.1479 CDS AZTY01000225.1 6158 5301 -2 - 858 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229919.peg.1480 CDS AZTY01000225.1 6955 6281 -1 - 675 Queuosine Biosynthesis QueE Radical SAM tRNA modification Bacteria
fig|6666666.229919.peg.1481 CDS AZTY01000225.1 7341 6916 -3 - 426 Queuosine biosynthesis QueD, PTPS-I tRNA modification Bacteria
fig|6666666.229919.peg.1482 CDS AZTY01000226.1 2789 477 -2 - 2313 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis
fig|6666666.229919.peg.1483 CDS AZTY01000226.1 3739 2888 -1 - 852 Formate efflux transporter (TC 2.A.44 family) - none -
fig|6666666.229919.peg.1484 CDS AZTY01000226.1 4052 4402 2 + 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229919.peg.1485 CDS AZTY01000226.1 4403 4756 2 + 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229919.peg.1486 CDS AZTY01000226.1 4758 5804 3 + 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases
fig|6666666.229919.peg.1487 CDS AZTY01000226.1 5806 6738 1 + 933 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229919.peg.1488 CDS AZTY01000226.1 6822 6983 3 + 162 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229919.peg.1489 CDS AZTY01000226.1 8048 7083 -2 - 966 6-phosphofructokinase (EC 2.7.1.11) - none -
fig|6666666.229919.peg.1490 CDS AZTY01000226.1 9030 8110 -3 - 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229919.peg.1491 CDS AZTY01000226.1 9569 9030 -2 - 540 FIG00696199: hypothetical protein - none -
fig|6666666.229919.peg.1492 CDS AZTY01000227.1 679 227 -1 - 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229919.peg.1493 CDS AZTY01000227.1 845 1837 2 + 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229919.peg.1494 CDS AZTY01000227.1 2402 1893 -2 - 510 tRNA dihydrouridine synthase A - none -
fig|6666666.229919.peg.1495 CDS AZTY01000228.1 430 780 1 + 351 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229919.peg.1496 CDS AZTY01000228.1 971 846 -2 - 126 hypothetical protein - none -
fig|6666666.229919.peg.1497 CDS AZTY01000228.1 1326 964 -3 - 363 FIG00696564: hypothetical protein - none -
fig|6666666.229919.peg.1498 CDS AZTY01000228.1 1483 1277 -1 - 207 hypothetical protein - none -
fig|6666666.229919.peg.1499 CDS AZTY01000229.1 1231 2229 1 + 999 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229919.peg.1500 CDS AZTY01000229.1 2251 3330 1 + 1080 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229919.peg.1501 CDS AZTY01000229.1 3333 5027 3 + 1695 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229919.peg.1502 CDS AZTY01000229.1 5049 6107 3 + 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229919.peg.1503 CDS AZTY01000229.1 6670 6233 -1 - 438 Putative transporting ATPase - none -
fig|6666666.229919.peg.1504 CDS AZTY01000229.1 8326 6866 -1 - 1461 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229919.peg.1505 CDS AZTY01000230.1 4468 440 -1 - 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229919.peg.1506 CDS AZTY01000230.1 5110 4739 -1 - 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster
fig|6666666.229919.peg.1507 CDS AZTY01000230.1 5653 5162 -1 - 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster
fig|6666666.229919.peg.1508 CDS AZTY01000230.1 5994 5824 -3 - 171 hypothetical protein - none -
fig|6666666.229919.peg.1509 CDS AZTY01000230.1 6698 6009 -2 - 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster
fig|6666666.229919.peg.1510 CDS AZTY01000230.1 7131 6703 -3 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster
fig|6666666.229919.peg.1511 CDS AZTY01000230.1 7838 7287 -2 - 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229919.peg.1512 CDS AZTY01000230.1 8250 7840 -3 - 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229919.peg.1513 CDS AZTY01000230.1 9392 8688 -2 - 705 hypothetical protein - none -
fig|6666666.229919.peg.1514 CDS AZTY01000230.1 9706 9452 -1 - 255 Mobile element protein - none -
fig|6666666.229919.peg.1515 CDS AZTY01000231.1 1172 201 -2 - 972 FIG00696476: hypothetical protein - none -
fig|6666666.229919.peg.1516 CDS AZTY01000232.1 222 61 -3 - 162 Mobile element protein - none -
fig|6666666.229919.peg.1517 CDS AZTY01000232.1 847 590 -1 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229919.peg.1518 CDS AZTY01000232.1 1038 847 -3 - 192 LSU ribosomal protein L29p (L35e) - none -
fig|6666666.229919.peg.1519 CDS AZTY01000232.1 1448 1038 -2 - 411 LSU ribosomal protein L16p (L10e) - none -
fig|6666666.229919.peg.1520 CDS AZTY01000232.1 2169 1462 -3 - 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229919.peg.1521 CDS AZTY01000232.1 2518 2186 -1 - 333 LSU ribosomal protein L22p (L17e) - none -
fig|6666666.229919.peg.1522 CDS AZTY01000232.1 2804 2529 -2 - 276 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229919.peg.1523 CDS AZTY01000232.1 3651 2830 -3 - 822 LSU ribosomal protein L2p (L8e) - none -
fig|6666666.229919.peg.1524 CDS AZTY01000232.1 3974 3672 -2 - 303 LSU ribosomal protein L23p (L23Ae) - none -
fig|6666666.229919.peg.1525 CDS AZTY01000232.1 4573 3971 -1 - 603 LSU ribosomal protein L4p (L1e) - none -
fig|6666666.229919.peg.1526 CDS AZTY01000232.1 5215 4589 -1 - 627 LSU ribosomal protein L3p (L3e) - none -
fig|6666666.229919.peg.1527 CDS AZTY01000232.1 5543 5232 -2 - 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229919.peg.1528 CDS AZTY01000232.1 6689 5793 -2 - 897 Transcriptional regulators, LysR family - none -
fig|6666666.229919.peg.1529 CDS AZTY01000232.1 7026 7616 3 + 591 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229919.peg.1530 CDS AZTY01000232.1 7628 8293 2 + 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229919.peg.1531 CDS AZTY01000232.1 8296 9639 1 + 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229919.peg.1532 CDS AZTY01000232.1 9657 10838 3 + 1182 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism
fig|6666666.229919.peg.1533 CDS AZTY01000232.1 11403 10936 -3 - 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229919.peg.1534 CDS AZTY01000232.1 13023 11494 -3 - 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229919.peg.1535 CDS AZTY01000232.1 14072 13140 -2 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229919.peg.1536 CDS AZTY01000232.1 15086 14082 -2 - 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229919.peg.1537 CDS AZTY01000233.1 1505 2734 2 + 1230 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon - none -
fig|6666666.229919.peg.1538 CDS AZTY01000234.1 118 1449 1 + 1332 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229919.peg.1539 CDS AZTY01000234.1 3301 2333 -1 - 969 ABC transporter ATP-binding protein - none -
fig|6666666.229919.peg.1540 CDS AZTY01000235.1 952 2610 1 + 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229919.peg.1541 CDS AZTY01000235.1 2622 2735 3 + 114 hypothetical protein - none -
fig|6666666.229919.peg.1542 CDS AZTY01000235.1 2767 3480 1 + 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965
fig|6666666.229919.peg.1543 CDS AZTY01000235.1 3548 3691 2 + 144 hypothetical protein - none -
fig|6666666.229919.peg.1544 CDS AZTY01000236.1 304 1848 1 + 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229919.peg.1545 CDS AZTY01000236.1 2129 1911 -2 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229919.peg.1546 CDS AZTY01000236.1 2154 2306 3 + 153 hypothetical protein - none -
fig|6666666.229919.peg.1547 CDS AZTY01000236.1 2349 3656 3 + 1308 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229919.peg.1548 CDS AZTY01000236.1 3668 4093 2 + 426 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions;
pyrimidine conversions
fig|6666666.229919.peg.1549 CDS AZTY01000236.1 4229 5374 2 + 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229919.peg.1550 CDS AZTY01000236.1 5482 5637 1 + 156 Mobile element protein - none -
fig|6666666.229919.peg.1551 CDS AZTY01000236.1 5686 5853 1 + 168 hypothetical protein - none -
fig|6666666.229919.peg.1552 CDS AZTY01000236.1 7173 6004 -3 - 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229919.peg.1553 CDS AZTY01000236.1 7381 7190 -1 - 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229919.peg.1554 CDS AZTY01000236.1 7971 7396 -3 - 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229919.peg.1555 CDS AZTY01000236.1 8739 7999 -3 - 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229919.peg.1556 CDS AZTY01000236.1 9782 8772 -2 - 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229919.peg.1557 CDS AZTY01000236.1 10258 9779 -1 - 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229919.peg.1558 CDS AZTY01000236.1 10950 10255 -3 - 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229919.peg.1559 CDS AZTY01000236.1 11228 10950 -2 - 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229919.peg.1560 CDS AZTY01000237.1 2502 2206 -3 - 297 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229919.peg.1561 CDS AZTY01000238.1 1401 784 -3 - 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229919.peg.1562 CDS AZTY01000239.1 1022 342 -2 - 681 UPF0319 protein YccT precursor - none -
fig|6666666.229919.peg.1563 CDS AZTY01000239.1 1167 1439 3 + 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229919.peg.1564 CDS AZTY01000239.1 2262 1414 -3 - 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229919.peg.1565 CDS AZTY01000239.1 3116 2259 -2 - 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229919.peg.1566 CDS AZTY01000239.1 4006 3116 -1 - 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229919.peg.1567 CDS AZTY01000239.1 4887 4006 -3 - 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229919.peg.1568 CDS AZTY01000239.1 5314 4985 -1 - 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) Lipoic acid synthesis cluster
fig|6666666.229919.peg.1569 CDS AZTY01000239.1 6062 5400 -2 - 663 Putative TEGT family carrier/transport protein - none -
fig|6666666.229919.peg.1570 CDS AZTY01000239.1 6378 6812 3 + 435 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229919.peg.1571 CDS AZTY01000239.1 6843 8630 3 + 1788 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229919.peg.1572 CDS AZTY01000241.1 1530 2513 3 + 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229919.peg.1573 CDS AZTY01000241.1 2536 2826 1 + 291 hypothetical protein - none -
fig|6666666.229919.peg.1574 CDS AZTY01000241.1 4189 2891 -1 - 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229919.peg.1575 CDS AZTY01000241.1 5242 4277 -1 - 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria
fig|6666666.229919.peg.1576 CDS AZTY01000241.1 6197 5256 -2 - 942 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229919.peg.1577 CDS AZTY01000242.1 102 275 3 + 174 hypothetical protein - none -
fig|6666666.229919.peg.1578 CDS AZTY01000243.1 1 1095 1 + 1095 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229919.peg.1579 CDS AZTY01000243.1 1130 2191 2 + 1062 hypothetical protein - none -
fig|6666666.229919.peg.1580 CDS AZTY01000243.1 2193 3146 3 + 954 hypothetical protein - none -
fig|6666666.229919.peg.1581 CDS AZTY01000243.1 3167 4297 2 + 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229919.peg.1582 CDS AZTY01000243.1 4319 4588 2 + 270 hypothetical protein - none -
fig|6666666.229919.peg.1583 CDS AZTY01000243.1 4658 4906 2 + 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229919.peg.1584 CDS AZTY01000243.1 5298 4996 -3 - 303 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229919.peg.1585 CDS AZTY01000244.1 275 484 2 + 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229919.peg.1586 CDS AZTY01000244.1 997 551 -1 - 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229919.peg.1587 CDS AZTY01000246.1 1161 1865 3 + 705 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229919.peg.1588 CDS AZTY01000246.1 3406 1949 -1 - 1458 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis;
tRNA modification Archaea;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA modification Bacteria
fig|6666666.229919.peg.1589 CDS AZTY01000246.1 3712 4812 1 + 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229919.peg.1590 CDS AZTY01000246.1 6579 5947 -3 - 633 hypothetical protein - none -
fig|6666666.229919.peg.1591 CDS AZTY01000247.1 1007 1933 2 + 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229919.peg.1592 CDS AZTY01000248.1 94 297 1 + 204 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) - none -
fig|6666666.229919.peg.1593 CDS AZTY01000248.1 294 926 3 + 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229919.peg.1594 CDS AZTY01000248.1 929 1705 2 + 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229919.peg.1595 CDS AZTY01000248.1 1794 3146 3 + 1353 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229919.peg.1596 CDS AZTY01000248.1 3171 4511 3 + 1341 FIG00782214: hypothetical protein - none -
fig|6666666.229919.peg.1597 CDS AZTY01000250.1 114 272 3 + 159 hypothetical protein - none -
fig|6666666.229919.peg.1598 CDS AZTY01000250.1 698 537 -2 - 162 hypothetical protein - none -
fig|6666666.229919.peg.1599 CDS AZTY01000251.1 576 406 -3 - 171 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229919.peg.1600 CDS AZTY01000254.1 742 1299 1 + 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229919.peg.1601 CDS AZTY01000255.1 1312 1788 1 + 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229919.peg.1602 CDS AZTY01000255.1 2166 1864 -3 - 303 FIG004454: RNA binding protein - none -
fig|6666666.229919.peg.1603 CDS AZTY01000255.1 2334 2633 3 + 300 Phage-related protein - none -
fig|6666666.229919.peg.1604 CDS AZTY01000255.1 2630 2926 2 + 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229919.peg.1605 CDS AZTY01000255.1 3573 2959 -3 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD
fig|6666666.229919.peg.1606 CDS AZTY01000256.1 1190 480 -2 - 711 hypothetical protein - none -
fig|6666666.229919.peg.1607 CDS AZTY01000256.1 1906 1751 -1 - 156 hypothetical protein - none -
fig|6666666.229919.peg.1608 CDS AZTY01000257.1 9 251 3 + 243 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229919.peg.1609 CDS AZTY01000257.1 377 940 2 + 564 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229919.peg.1610 CDS AZTY01000257.1 949 1884 1 + 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229919.peg.1611 CDS AZTY01000258.1 933 115 -3 - 819 Aldose 1-epimerase - none -
fig|6666666.229919.peg.1612 CDS AZTY01000258.1 1009 2946 1 + 1938 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229919.peg.1613 CDS AZTY01000258.1 2949 3671 3 + 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.229919.peg.1614 CDS AZTY01000258.1 3788 3675 -2 - 114 hypothetical protein - none -
fig|6666666.229919.peg.1615 CDS AZTY01000259.1 1561 173 -1 - 1389 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229919.peg.1616 CDS AZTY01000259.1 2301 1606 -3 - 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229919.peg.1617 CDS AZTY01000259.1 2756 2343 -2 - 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex - none -
fig|6666666.229919.peg.1618 CDS AZTY01000259.1 3847 2822 -1 - 1026 Nucleoid-associated protein NdpA - none -
fig|6666666.229919.peg.1619 CDS AZTY01000259.1 3940 4197 1 + 258 FIG002927: hypothetical protein - none -
fig|6666666.229919.peg.1620 CDS AZTY01000260.1 14 646 2 + 633 Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.229919.peg.1621 CDS AZTY01000260.1 1254 2195 3 + 942 FIG00807791: hypothetical protein - none -
fig|6666666.229919.peg.1622 CDS AZTY01000262.1 1007 336 -2 - 672 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229919.peg.1623 CDS AZTY01000262.1 2929 968 -1 - 1962 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229919.peg.1624 CDS AZTY01000262.1 3339 3208 -3 - 132 hypothetical protein - none -
fig|6666666.229919.peg.1625 CDS AZTY01000262.1 4175 3531 -2 - 645 hypothetical protein - none -
fig|6666666.229919.peg.1626 CDS AZTY01000262.1 5056 4172 -1 - 885 hypothetical protein - none -
fig|6666666.229919.peg.1627 CDS AZTY01000263.1 878 573 -2 - 306 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229919.peg.1628 CDS AZTY01000263.1 872 1606 2 + 735 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229919.peg.1629 CDS AZTY01000263.1 1636 2922 1 + 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229919.peg.1630 CDS AZTY01000263.1 3231 3076 -3 - 156 hypothetical protein - none -
fig|6666666.229919.peg.1631 CDS AZTY01000263.1 3417 3665 3 + 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229919.peg.1632 CDS AZTY01000263.1 3691 4218 1 + 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229919.peg.1633 CDS AZTY01000263.1 4284 5033 3 + 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229919.peg.1634 CDS AZTY01000263.1 5059 5409 1 + 351 LSU ribosomal protein L19p - none -
fig|6666666.229919.peg.1635 CDS AZTY01000263.1 6007 5519 -1 - 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229919.peg.1636 CDS AZTY01000263.1 7080 6007 -3 - 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229919.peg.1637 CDS AZTY01000263.1 8205 7150 -3 - 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229919.peg.1638 CDS AZTY01000265.1 146 979 2 + 834 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229919.peg.1639 CDS AZTY01000265.1 1880 1275 -2 - 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229919.peg.1640 CDS AZTY01000265.1 3378 1984 -3 - 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229919.peg.1641 CDS AZTY01000265.1 3588 4037 3 + 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229919.peg.1642 CDS AZTY01000265.1 4076 4390 2 + 315 RNA-binding domain protein - none -
fig|6666666.229919.peg.1643 CDS AZTY01000265.1 4462 7326 1 + 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229919.peg.1644 CDS AZTY01000265.1 7393 8286 1 + 894 hypothetical protein - none -
fig|6666666.229919.peg.1645 CDS AZTY01000265.1 8525 8283 -2 - 243 HipA protein Persister Cells
fig|6666666.229919.peg.1646 CDS AZTY01000265.1 8767 8946 1 + 180 hypothetical protein - none -
fig|6666666.229919.peg.1647 CDS AZTY01000265.1 9181 8900 -1 - 282 HipB protein Persister Cells
fig|6666666.229919.peg.1648 CDS AZTY01000265.1 9708 9325 -3 - 384 Inner membrane component of tripartite multidrug resistance system - none -
fig|6666666.229919.peg.1649 CDS AZTY01000266.1 14 1042 2 + 1029 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229919.peg.1650 CDS AZTY01000267.1 46 747 1 + 702 hypothetical protein - none -
fig|6666666.229919.peg.1651 CDS AZTY01000268.1 31 849 1 + 819 hypothetical protein - none -
fig|6666666.229919.peg.1652 CDS AZTY01000269.1 1172 2284 2 + 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like - none -
fig|6666666.229919.peg.1653 CDS AZTY01000270.1 206 1450 2 + 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229919.peg.1654 CDS AZTY01000270.1 3285 1525 -3 - 1761 Paraquat-inducible protein B Oxidative stress
fig|6666666.229919.peg.1655 CDS AZTY01000271.1 15 533 3 + 519 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229919.peg.1656 CDS AZTY01000271.1 564 1949 3 + 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229919.peg.1657 CDS AZTY01000272.1 1126 1239 1 + 114 hypothetical protein - none -
fig|6666666.229919.peg.1658 CDS AZTY01000272.1 1649 2995 2 + 1347 CRISPR-associated protein, Csy1 family CRISPRs
fig|6666666.229919.peg.1659 CDS AZTY01000272.1 3005 3964 2 + 960 CRISPR-associated protein, Csy2 family CRISPRs
fig|6666666.229919.peg.1660 CDS AZTY01000272.1 3964 4974 1 + 1011 CRISPR-associated protein, Csy3 family CRISPRs
fig|6666666.229919.peg.1661 CDS AZTY01000273.1 618 1358 3 + 741 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229919.peg.1662 CDS AZTY01000273.1 1420 1893 1 + 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229919.peg.1663 CDS AZTY01000273.1 1947 3161 3 + 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229919.peg.1664 CDS AZTY01000273.1 3221 3604 2 + 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229919.peg.1665 CDS AZTY01000273.1 3736 4059 1 + 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229919.peg.1666 CDS AZTY01000273.1 4071 4592 3 + 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229919.peg.1667 CDS AZTY01000274.1 665 886 2 + 222 probable transcription regulator - none -
fig|6666666.229919.peg.1668 CDS AZTY01000274.1 5097 1135 -3 - 3963 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229919.peg.1669 CDS AZTY01000276.1 77 376 2 + 300 hypothetical protein - none -
fig|6666666.229919.peg.1670 CDS AZTY01000276.1 550 753 1 + 204 hypothetical protein - none -
fig|6666666.229919.peg.1671 CDS AZTY01000277.1 588 4 -3 - 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229919.peg.1672 CDS AZTY01000277.1 2020 677 -1 - 1344 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229919.peg.1673 CDS AZTY01000278.1 352 236 -1 - 117 hypothetical protein - none -
fig|6666666.229919.peg.1674 CDS AZTY01000278.1 2156 369 -2 - 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229919.peg.1675 CDS AZTY01000278.1 2390 2211 -2 - 180 hypothetical protein - none -
fig|6666666.229919.peg.1676 CDS AZTY01000279.1 1342 1112 -1 - 231 FIG00696102: hypothetical protein - none -
fig|6666666.229919.peg.1677 CDS AZTY01000279.1 2009 1446 -2 - 564 Outer membrane protein 18/16 - none -
fig|6666666.229919.peg.1678 CDS AZTY01000281.1 207 668 3 + 462 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229919.peg.1679 CDS AZTY01000282.1 1072 98 -1 - 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.1680 CDS AZTY01000282.1 1564 1091 -1 - 474 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.1681 CDS AZTY01000284.1 9 323 3 + 315 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229919.peg.1682 CDS AZTY01000284.1 338 1363 2 + 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229919.peg.1683 CDS AZTY01000284.1 1379 1693 2 + 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229919.peg.1684 CDS AZTY01000284.1 1878 2726 3 + 849 RNA polymerase sigma factor RpoH Transcription initiation, bacterial sigma factors
fig|6666666.229919.peg.1685 CDS AZTY01000284.1 3320 2793 -2 - 528 DNA transformation protein TfoX Orphan regulatory proteins
fig|6666666.229919.peg.1686 CDS AZTY01000284.1 4297 4016 -1 - 282 hypothetical protein - none -
fig|6666666.229919.peg.1687 CDS AZTY01000284.1 5761 4982 -1 - 780 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229919.peg.1688 CDS AZTY01000286.1 635 763 2 + 129 hypothetical protein - none -
fig|6666666.229919.peg.1689 CDS AZTY01000286.1 747 1445 3 + 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229919.peg.1690 CDS AZTY01000286.1 2209 1520 -1 - 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229919.peg.1691 CDS AZTY01000286.1 2590 3249 1 + 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229919.peg.1692 CDS AZTY01000286.1 3271 3387 1 + 117 hypothetical protein - none -
fig|6666666.229919.peg.1693 CDS AZTY01000288.1 253 819 1 + 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229919.peg.1694 CDS AZTY01000288.1 975 1919 3 + 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229919.peg.1695 CDS AZTY01000289.1 189 1 -3 - 189 hypothetical protein - none -
fig|6666666.229919.peg.1696 CDS AZTY01000289.1 389 1012 2 + 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229919.peg.1697 CDS AZTY01000289.1 1063 1887 1 + 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229919.peg.1698 CDS AZTY01000289.1 3225 2398 -3 - 828 FIG00711691: hypothetical protein - none -
fig|6666666.229919.peg.1699 CDS AZTY01000289.1 3662 3198 -2 - 465 FIG00710847: hypothetical protein - none -
fig|6666666.229919.peg.1700 CDS AZTY01000289.1 3884 4714 2 + 831 Queuosine Biosynthesis QueC ATPase tRNA modification Bacteria
fig|6666666.229919.peg.1701 CDS AZTY01000289.1 4839 6053 3 + 1215 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229919.peg.1702 CDS AZTY01000289.1 7160 6132 -2 - 1029 Alcohol dehydrogenase (EC 1.1.1.1) Butanol Biosynthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1703 CDS AZTY01000289.1 7431 9569 3 + 2139 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229919.peg.1704 CDS AZTY01000289.1 10010 9666 -2 - 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229919.peg.1705 CDS AZTY01000290.1 1626 310 -3 - 1317 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229919.peg.1706 CDS AZTY01000290.1 2241 1717 -3 - 525 FIG00696143: hypothetical protein - none -
fig|6666666.229919.peg.1707 CDS AZTY01000290.1 3055 2273 -1 - 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229919.peg.1708 CDS AZTY01000290.1 4042 3059 -1 - 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229919.peg.1709 CDS AZTY01000290.1 4671 4039 -3 - 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229919.peg.1710 CDS AZTY01000290.1 5716 4673 -1 - 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229919.peg.1711 CDS AZTY01000290.1 6193 5855 -1 - 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229919.peg.1712 CDS AZTY01000290.1 7027 6269 -1 - 759 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229919.peg.1713 CDS AZTY01000290.1 7220 8125 2 + 906 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229919.peg.1714 CDS AZTY01000292.1 1446 772 -3 - 675 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229919.peg.1715 CDS AZTY01000292.1 4278 1561 -3 - 2718 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229919.peg.1716 CDS AZTY01000292.1 5309 4275 -2 - 1035 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229919.peg.1717 CDS AZTY01000292.1 5436 5293 -3 - 144 hypothetical protein - none -
fig|6666666.229919.peg.1718 CDS AZTY01000292.1 5945 5436 -2 - 510 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229919.peg.1719 CDS AZTY01000293.1 169 609 1 + 441 miscellaneous; hypothetical/partial homology - none -
fig|6666666.229919.peg.1720 CDS AZTY01000295.1 1648 992 -1 - 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229919.peg.1721 CDS AZTY01000295.1 2391 1747 -3 - 645 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heme and Siroheme Biosynthesis
fig|6666666.229919.peg.1722 CDS AZTY01000296.1 41 154 2 + 114 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229919.peg.1723 CDS AZTY01000296.1 343 197 -1 - 147 hypothetical protein - none -
fig|6666666.229919.peg.1724 CDS AZTY01000296.1 1784 354 -2 - 1431 Transglycosylase, Slt family - none -
fig|6666666.229919.peg.1725 CDS AZTY01000296.1 2158 1805 -1 - 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate biosynthesis cluster
fig|6666666.229919.peg.1726 CDS AZTY01000296.1 2255 2851 2 + 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1727 CDS AZTY01000296.1 3384 2941 -3 - 444 FIG00904084: hypothetical protein - none -
fig|6666666.229919.peg.1728 CDS AZTY01000296.1 3479 4306 2 + 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229919.peg.1729 CDS AZTY01000296.1 5224 4508 -1 - 717 putative lipoprotein - none -
fig|6666666.229919.peg.1730 CDS AZTY01000298.1 176 18 -2 - 159 hypothetical protein - none -
fig|6666666.229919.peg.1731 CDS AZTY01000298.1 226 375 1 + 150 hypothetical protein - none -
fig|6666666.229919.peg.1732 CDS AZTY01000302.1 128 730 2 + 603 lipoprotein HlpB - none -
fig|6666666.229919.peg.1733 CDS AZTY01000302.1 953 1783 2 + 831 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229919.peg.1734 CDS AZTY01000302.1 1963 3291 1 + 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229919.peg.1735 CDS AZTY01000303.1 644 165 -2 - 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229919.peg.1736 CDS AZTY01000304.1 301 62 -1 - 240 hypothetical protein - none -
fig|6666666.229919.peg.1737 CDS AZTY01000305.1 44 1378 2 + 1335 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain Purine conversions;
Purine salvage cluster
fig|6666666.229919.peg.1738 CDS AZTY01000306.1 171 344 3 + 174 hypothetical protein - none -
fig|6666666.229919.peg.1739 CDS AZTY01000306.1 1026 577 -3 - 450 ImpA - none -
fig|6666666.229919.peg.1740 CDS AZTY01000306.1 1224 1388 3 + 165 hypothetical protein - none -
fig|6666666.229919.peg.1741 CDS AZTY01000307.1 61 834 1 + 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis
fig|6666666.229919.peg.1742 CDS AZTY01000307.1 963 2792 3 + 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229919.peg.1743 CDS AZTY01000307.1 4084 3179 -1 - 906 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229919.peg.1744 CDS AZTY01000308.1 121 8 -1 - 114 hypothetical protein - none -
fig|6666666.229919.peg.1745 CDS AZTY01000308.1 68 469 2 + 402 CRISPR-associated protein, Csy4 family CRISPRs
fig|6666666.229919.peg.1746 CDS AZTY01000308.1 2938 515 -1 - 2424 CRISPR-associated helicase Cas3, Yersinia-type CRISPRs
fig|6666666.229919.peg.1747 CDS AZTY01000311.1 16 135 1 + 120 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229919.peg.1748 CDS AZTY01000311.1 117 446 3 + 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229919.peg.1749 CDS AZTY01000311.1 427 1428 1 + 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229919.peg.1750 CDS AZTY01000312.1 1073 189 -2 - 885 hypothetical protein - none -
fig|6666666.229919.peg.1751 CDS AZTY01000312.1 1316 1789 2 + 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229919.peg.1752 CDS AZTY01000312.1 1796 2221 2 + 426 Transcription termination protein NusB Transcription factors bacterial
fig|6666666.229919.peg.1753 CDS AZTY01000312.1 2240 3223 2 + 984 Thiamine-monophosphate kinase (EC 2.7.4.16) Thiamin biosynthesis
fig|6666666.229919.peg.1754 CDS AZTY01000312.1 3233 3724 2 + 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1755 CDS AZTY01000312.1 3733 4356 1 + 624 L-lysine permease - none -
fig|6666666.229919.peg.1756 CDS AZTY01000313.1 897 136 -3 - 762 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229919.peg.1757 CDS AZTY01000314.1 450 1463 3 + 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229919.peg.1758 CDS AZTY01000314.1 1558 1998 1 + 441 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229919.peg.1759 CDS AZTY01000314.1 1998 2243 3 + 246 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229919.peg.1760 CDS AZTY01000314.1 2244 2699 3 + 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229919.peg.1761 CDS AZTY01000314.1 2899 3540 1 + 642 Stringent starvation protein A Carbon Starvation
fig|6666666.229919.peg.1762 CDS AZTY01000314.1 3552 4013 3 + 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229919.peg.1763 CDS AZTY01000314.1 4358 4176 -2 - 183 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn;
tRNA modification Archaea
fig|6666666.229919.peg.1764 CDS AZTY01000316.1 37 543 1 + 507 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) - none -
fig|6666666.229919.peg.1765 CDS AZTY01000316.1 574 1818 1 + 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) - none -
fig|6666666.229919.peg.1766 CDS AZTY01000318.1 7 120 1 + 114 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose utilization cluster
fig|6666666.229919.peg.1767 CDS AZTY01000319.1 519 160 -3 - 360 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229919.peg.1768 CDS AZTY01000320.1 91 993 1 + 903 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229919.peg.1769 CDS AZTY01000320.1 1033 1320 1 + 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229919.peg.1770 CDS AZTY01000320.1 1317 2192 3 + 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229919.peg.1771 CDS AZTY01000320.1 2207 3709 2 + 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229919.peg.1772 CDS AZTY01000320.1 3903 5315 3 + 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229919.peg.1773 CDS AZTY01000320.1 5302 6735 1 + 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229919.peg.1774 CDS AZTY01000320.1 7014 8513 3 + 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229919.peg.1775 CDS AZTY01000320.1 9809 8778 -2 - 1032 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229919.peg.1776 CDS AZTY01000320.1 10957 9803 -1 - 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229919.peg.1777 CDS AZTY01000320.1 11594 11025 -2 - 570 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229919.peg.1778 CDS AZTY01000321.1 1484 867 -2 - 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229919.peg.1779 CDS AZTY01000322.1 19 1608 1 + 1590 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229919.peg.1780 CDS AZTY01000322.1 1756 2814 1 + 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229919.peg.1781 CDS AZTY01000322.1 2896 3354 1 + 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229919.peg.1782 CDS AZTY01000324.1 115 1470 1 + 1356 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 RNA methylation
fig|6666666.229919.peg.1783 CDS AZTY01000324.1 1494 2870 3 + 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229919.peg.1784 CDS AZTY01000324.1 2980 3375 1 + 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229919.peg.1785 CDS AZTY01000324.1 3470 3904 2 + 435 Ribonuclease E inhibitor RraB RNA processing and degradation, bacterial
fig|6666666.229919.peg.1786 CDS AZTY01000324.1 3955 4674 1 + 720 probable periplasmic protein NMA1059 - none -
fig|6666666.229919.peg.1787 CDS AZTY01000324.1 4769 5365 2 + 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229919.peg.1788 CDS AZTY01000324.1 6276 5782 -3 - 495 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster
fig|6666666.229919.peg.1789 CDS AZTY01000324.1 7513 6311 -1 - 1203 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229919.peg.1790 CDS AZTY01000325.1 102 359 3 + 258 Phage tail fibers Phage tail fiber proteins
fig|6666666.229919.peg.1791 CDS AZTY01000325.1 359 622 2 + 264 Phage tail fibers Phage tail fiber proteins
fig|6666666.229919.peg.1792 CDS AZTY01000326.1 1075 1968 1 + 894 Membrane protein LAPB - none -
fig|6666666.229919.peg.1793 CDS AZTY01000326.1 1961 2638 2 + 678 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229919.peg.1794 CDS AZTY01000326.1 2736 4382 3 + 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229919.peg.1795 CDS AZTY01000326.1 4444 4731 1 + 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229919.peg.1796 CDS AZTY01000326.1 4830 5126 3 + 297 Inner membrane protein yciS - none -
fig|6666666.229919.peg.1797 CDS AZTY01000327.1 56 430 2 + 375 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229919.peg.1798 CDS AZTY01000327.1 427 1164 1 + 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229919.peg.1799 CDS AZTY01000328.1 1426 1199 -1 - 228 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism
fig|6666666.229919.peg.1800 CDS AZTY01000331.1 1707 817 -3 - 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229919.peg.1801 CDS AZTY01000331.1 1963 1718 -1 - 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229919.peg.1802 CDS AZTY01000334.1 1488 949 -3 - 540 Inosose dehydratase (EC 4.2.1.44) - none -
fig|6666666.229919.peg.1803 CDS AZTY01000335.1 1276 122 -1 - 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229919.peg.1804 CDS AZTY01000335.1 1753 1484 -1 - 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229919.peg.1805 CDS AZTY01000335.1 2598 1849 -3 - 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229919.peg.1806 CDS AZTY01000335.1 2905 2651 -1 - 255 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229919.peg.1807 CDS AZTY01000336.1 23 397 2 + 375 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1808 CDS AZTY01000336.1 514 789 1 + 276 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229919.peg.1809 CDS AZTY01000336.1 806 1102 2 + 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229919.peg.1810 CDS AZTY01000336.1 1921 1160 -1 - 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229919.peg.1811 CDS AZTY01000336.1 2020 3303 1 + 1284 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) KDO2-Lipid A biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229919.peg.1812 CDS AZTY01000336.1 3304 3798 1 + 495 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229919.peg.1813 CDS AZTY01000336.1 4572 3847 -3 - 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229919.peg.1814 CDS AZTY01000336.1 4661 5704 2 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229919.peg.1815 CDS AZTY01000336.1 6142 5801 -1 - 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229919.peg.1816 CDS AZTY01000336.1 6246 7163 3 + 918 transcriptional regulator MtrA - none -
fig|6666666.229919.peg.1817 CDS AZTY01000336.1 7251 9095 3 + 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229919.peg.1818 CDS AZTY01000336.1 11574 9136 -3 - 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1819 CDS AZTY01000337.1 2612 45 -2 - 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229919.peg.1820 CDS AZTY01000337.1 4086 2755 -3 - 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229919.peg.1821 CDS AZTY01000337.1 4487 6439 2 + 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229919.peg.1822 CDS AZTY01000337.1 6454 7005 1 + 552 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229919.peg.1823 CDS AZTY01000337.1 7092 7745 3 + 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229919.peg.1824 CDS AZTY01000337.1 8097 9449 3 + 1353 Histidine permease YuiF - none -
fig|6666666.229919.peg.1825 CDS AZTY01000337.1 9513 10079 3 + 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229919.peg.1826 CDS AZTY01000337.1 11522 10137 -2 - 1386 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229919.peg.1827 CDS AZTY01000337.1 11669 11788 2 + 120 hypothetical protein - none -
fig|6666666.229919.peg.1828 CDS AZTY01000337.1 11898 12047 3 + 150 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) CBSS-87626.3.peg.3639;
Ubiquinone Biosynthesis
fig|6666666.229919.peg.1829 CDS AZTY01000337.1 12794 12063 -2 - 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229919.peg.1830 CDS AZTY01000337.1 13767 12796 -3 - 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229919.peg.1831 CDS AZTY01000338.1 24 158 3 + 135 LSU ribosomal protein L21p CBSS-176279.3.peg.868
fig|6666666.229919.peg.1832 CDS AZTY01000338.1 179 436 2 + 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868
fig|6666666.229919.peg.1833 CDS AZTY01000338.1 507 1439 3 + 933 Permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229919.peg.1834 CDS AZTY01000338.1 1517 2434 2 + 918 Permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229919.peg.1835 CDS AZTY01000339.1 151 1116 1 + 966 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229919.peg.1836 CDS AZTY01000339.1 1137 1790 3 + 654 FIG00903983: hypothetical protein - none -
fig|6666666.229919.peg.1837 CDS AZTY01000339.1 1802 2128 2 + 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229919.peg.1838 CDS AZTY01000339.1 2454 2140 -3 - 315 Uncharacterized protein PM1437 - none -
fig|6666666.229919.peg.1839 CDS AZTY01000339.1 2497 3372 1 + 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229919.peg.1840 CDS AZTY01000340.1 46 576 1 + 531 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229919.peg.1841 CDS AZTY01000340.1 949 686 -1 - 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229919.peg.1842 CDS AZTY01000341.1 1068 334 -3 - 735 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229919.peg.1843 CDS AZTY01000342.1 122 919 2 + 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229919.peg.1844 CDS AZTY01000342.1 916 1767 1 + 852 Thymidylate synthase (EC 2.1.1.45) pyrimidine conversions
fig|6666666.229919.peg.1845 CDS AZTY01000342.1 2092 2619 1 + 528 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing
fig|6666666.229919.peg.1846 CDS AZTY01000342.1 3243 2845 -3 - 399 hypothetical protein - none -
fig|6666666.229919.peg.1847 CDS AZTY01000345.1 202 489 1 + 288 hypothetical protein - none -
fig|6666666.229919.peg.1848 CDS AZTY01000347.1 806 450 -2 - 357 DsrE-related protein - none -
fig|6666666.229919.peg.1849 CDS AZTY01000347.1 1761 1231 -3 - 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) - none -
fig|6666666.229919.peg.1850 CDS AZTY01000347.1 3247 1904 -1 - 1344 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229919.peg.1851 CDS AZTY01000348.1 46 429 1 + 384 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose utilization cluster
fig|6666666.229919.peg.1852 CDS AZTY01000348.1 451 576 1 + 126 hypothetical protein - none -
fig|6666666.229919.peg.1853 CDS AZTY01000348.1 1115 573 -2 - 543 Colicin V production protein - none -
fig|6666666.229919.peg.1854 CDS AZTY01000348.1 1737 1294 -3 - 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229919.peg.1855 CDS AZTY01000348.1 2005 3207 1 + 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229919.peg.1856 CDS AZTY01000349.1 143 985 2 + 843 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229919.peg.1857 CDS AZTY01000349.1 1332 1694 3 + 363 hypothetical protein - none -
fig|6666666.229919.peg.1858 CDS AZTY01000349.1 2265 1765 -3 - 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate biosynthesis cluster
fig|6666666.229919.peg.1859 CDS AZTY01000350.1 300 1202 3 + 903 hypothetical protein - none -
fig|6666666.229919.peg.1860 CDS AZTY01000351.1 25 579 1 + 555 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229919.peg.1861 CDS AZTY01000352.1 2 1072 2 + 1071 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229919.peg.1862 CDS AZTY01000352.1 1401 1192 -3 - 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229919.peg.1863 CDS AZTY01000352.1 2518 1484 -1 - 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229919.peg.1864 CDS AZTY01000354.1 481 320 -1 - 162 hypothetical protein - none -
fig|6666666.229919.peg.1865 CDS AZTY01000356.1 2499 1000 -3 - 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229919.peg.1866 CDS AZTY01000356.1 2625 3293 3 + 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229919.peg.1867 CDS AZTY01000356.1 3296 3769 2 + 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229919.peg.1868 CDS AZTY01000356.1 3766 4596 1 + 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229919.peg.1869 CDS AZTY01000357.1 30 218 3 + 189 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229919.peg.1870 CDS AZTY01000357.1 355 765 1 + 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Llipid A biosynthesis cluster
fig|6666666.229919.peg.1871 CDS AZTY01000357.1 786 1574 3 + 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229919.peg.1872 CDS AZTY01000357.1 1659 2843 3 + 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229919.peg.1873 CDS AZTY01000357.1 2836 3435 1 + 600 Ribonuclease HII (EC 3.1.26.4) Ribonuclease H
fig|6666666.229919.peg.1874 CDS AZTY01000357.1 3475 5343 1 + 1869 Putative transport protein - none -
fig|6666666.229919.peg.1875 CDS AZTY01000358.1 140 772 2 + 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1876 CDS AZTY01000358.1 772 1701 1 + 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1877 CDS AZTY01000359.1 258 58 -3 - 201 hypothetical protein - none -
fig|6666666.229919.peg.1878 CDS AZTY01000359.1 338 580 2 + 243 DNA-damage-inducible protein d - none -
fig|6666666.229919.peg.1879 CDS AZTY01000359.1 670 551 -1 - 120 hypothetical protein - none -
fig|6666666.229919.peg.1880 CDS AZTY01000359.1 1179 2027 3 + 849 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229919.peg.1881 CDS AZTY01000359.1 2539 3648 1 + 1110 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229919.peg.1882 CDS AZTY01000360.1 84 557 3 + 474 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229919.peg.1883 CDS AZTY01000360.1 554 1423 2 + 870 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229919.peg.1884 CDS AZTY01000360.1 1420 2271 1 + 852 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229919.peg.1885 CDS AZTY01000363.1 40 579 1 + 540 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229919.peg.1886 CDS AZTY01000363.1 773 1591 2 + 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229919.peg.1887 CDS AZTY01000363.1 3329 1797 -2 - 1533 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229919.peg.1888 CDS AZTY01000364.1 49 1848 1 + 1800 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229919.peg.1889 CDS AZTY01000364.1 1881 2189 3 + 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229919.peg.1890 CDS AZTY01000364.1 2167 2940 1 + 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229919.peg.1891 CDS AZTY01000364.1 3197 2997 -2 - 201 hypothetical protein - none -
fig|6666666.229919.peg.1892 CDS AZTY01000364.1 3268 3414 1 + 147 hypothetical protein - none -
fig|6666666.229919.peg.1893 CDS AZTY01000365.1 138 10 -3 - 129 hypothetical protein - none -
fig|6666666.229919.peg.1894 CDS AZTY01000366.1 2152 929 -1 - 1224 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229919.peg.1895 CDS AZTY01000366.1 2651 2214 -2 - 438 Glutamyl-tRNA reductase (EC 1.2.1.70) Heme and Siroheme Biosynthesis
fig|6666666.229919.peg.1896 CDS AZTY01000368.1 19 132 1 + 114 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229919.peg.1897 CDS AZTY01000368.1 265 137 -1 - 129 hypothetical protein - none -
fig|6666666.229919.peg.1898 CDS AZTY01000369.1 2054 771 -2 - 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229919.peg.1899 CDS AZTY01000369.1 2272 2883 1 + 612 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229919.peg.1900 CDS AZTY01000369.1 2957 5014 2 + 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229919.peg.1901 CDS AZTY01000369.1 5092 6600 1 + 1509 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229919.peg.1902 CDS AZTY01000369.1 6665 7225 2 + 561 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229919.peg.1903 CDS AZTY01000369.1 7302 7940 3 + 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229919.peg.1904 CDS AZTY01000369.1 8134 8012 -1 - 123 hypothetical protein - none -
fig|6666666.229919.peg.1905 CDS AZTY01000369.1 8219 11026 2 + 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229919.peg.1906 CDS AZTY01000369.1 11152 12375 1 + 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229919.peg.1907 CDS AZTY01000369.1 12561 13730 3 + 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) TCA Cycle
fig|6666666.229919.peg.1908 CDS AZTY01000369.1 13741 14613 1 + 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) TCA Cycle
fig|6666666.229919.peg.1909 CDS AZTY01000371.1 317 436 2 + 120 hypothetical protein - none -
fig|6666666.229919.peg.1910 CDS AZTY01000371.1 1162 1389 1 + 228 hypothetical protein - none -
fig|6666666.229919.peg.1911 CDS AZTY01000372.1 617 192 -2 - 426 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229919.peg.1912 CDS AZTY01000373.1 1750 2703 1 + 954 LsrR, transcriptional repressor of lsr operon - none -
fig|6666666.229919.peg.1913 CDS AZTY01000375.1 1097 969 -2 - 129 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System
fig|6666666.229919.peg.1914 CDS AZTY01000375.1 1965 1063 -3 - 903 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System
fig|6666666.229919.peg.1915 CDS AZTY01000376.1 1072 812 -1 - 261 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229919.peg.1916 CDS AZTY01000377.1 2746 422 -1 - 2325 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229919.peg.1917 CDS AZTY01000379.1 2167 539 -1 - 1629 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229919.peg.1918 CDS AZTY01000380.1 1465 1091 -1 - 375 GTP-binding protein EngB Universal GTPases
fig|6666666.229919.peg.1919 CDS AZTY01000381.1 2 514 2 + 513 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB - none -
fig|6666666.229919.peg.1920 CDS AZTY01000381.1 533 1411 2 + 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) - none -
fig|6666666.229919.peg.1921 CDS AZTY01000381.1 1444 1746 1 + 303 Autoinducer 2 (AI-2) modifying protein LsrG - none -
fig|6666666.229919.peg.1922 CDS AZTY01000381.1 2236 1850 -1 - 387 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229919.peg.1923 CDS AZTY01000382.1 26 802 2 + 777 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229919.peg.1924 CDS AZTY01000383.1 32 1609 2 + 1578 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229919.peg.1925 CDS AZTY01000387.1 748 539 -1 - 210 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229919.peg.1926 CDS AZTY01000388.1 1070 2440 2 + 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229919.peg.1927 CDS AZTY01000388.1 3663 2572 -3 - 1092 Putative exported protein precursor - none -
fig|6666666.229919.peg.1928 CDS AZTY01000390.1 3 146 3 + 144 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229919.peg.1929 CDS AZTY01000390.1 210 824 3 + 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229919.peg.1930 CDS AZTY01000390.1 833 1852 2 + 1020 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229919.peg.1931 CDS AZTY01000390.1 2217 1906 -3 - 312 Chromosome segregation ATPases - none -
fig|6666666.229919.peg.1932 CDS AZTY01000391.1 15 500 3 + 486 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229919.peg.1933 CDS AZTY01000392.1 112 486 1 + 375 hypothetical protein - none -
fig|6666666.229919.peg.1934 CDS AZTY01000393.1 36 1277 3 + 1242 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229919.peg.1935 CDS AZTY01000393.1 1299 2018 3 + 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229919.peg.1936 CDS AZTY01000393.1 2033 2902 2 + 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1937 CDS AZTY01000393.1 2911 4245 1 + 1335 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage CBSS-83331.1.peg.3039;
Periplasmic Stress Response
fig|6666666.229919.peg.1938 CDS AZTY01000393.1 4264 6675 1 + 2412 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.229919.peg.1939 CDS AZTY01000393.1 6780 7355 3 + 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229919.peg.1940 CDS AZTY01000394.1 139 840 1 + 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229919.peg.1941 CDS AZTY01000394.1 845 2038 2 + 1194 Bicyclomycin resistance protein - none -
fig|6666666.229919.peg.1942 CDS AZTY01000396.1 124 987 1 + 864 Permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229919.peg.1943 CDS AZTY01000397.1 5 220 2 + 216 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase - none -
fig|6666666.229919.peg.1944 CDS AZTY01000397.1 198 461 3 + 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1945 CDS AZTY01000397.1 464 715 2 + 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229919.peg.1946 CDS AZTY01000397.1 715 2382 1 + 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase - none -
fig|6666666.229919.peg.1947 CDS AZTY01000397.1 2408 2953 2 + 546 FIG017861: hypothetical protein - none -
fig|6666666.229919.peg.1948 CDS AZTY01000397.1 2950 4311 1 + 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase - none -
fig|6666666.229919.peg.1949 CDS AZTY01000398.1 51 728 3 + 678 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229919.peg.1950 CDS AZTY01000398.1 773 949 2 + 177 Permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229919.peg.1951 CDS AZTY01000398.1 946 1635 1 + 690 Permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229919.peg.1952 CDS AZTY01000398.1 1719 2042 3 + 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229919.peg.1953 CDS AZTY01000398.1 2159 3700 2 + 1542 Esterase/lipase - none -
fig|6666666.229919.peg.1954 CDS AZTY01000399.1 1362 1156 -3 - 207 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229919.peg.1955 CDS AZTY01000400.1 55 927 1 + 873 hypothetical protein - none -
fig|6666666.229919.peg.1956 CDS AZTY01000400.1 1322 969 -2 - 354 Putative translation initiation inhibitor, yjgF family - none -
fig|6666666.229919.peg.1957 CDS AZTY01000400.1 1463 2140 2 + 678 FIG00904286: hypothetical protein - none -
fig|6666666.229919.peg.1958 CDS AZTY01000400.1 2137 2856 1 + 720 hypothetical protein - none -
fig|6666666.229919.peg.1959 CDS AZTY01000400.1 3593 2991 -2 - 603 Na+/H+ antiporter - none -
fig|6666666.229919.peg.1960 CDS AZTY01000401.1 33 257 3 + 225 Integral membrane protein - none -
fig|6666666.229919.peg.1961 CDS AZTY01000404.1 59 1111 2 + 1053 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229919.peg.1962 CDS AZTY01000405.1 61 291 1 + 231 hypothetical protein - none -
fig|6666666.229919.peg.1963 CDS AZTY01000408.1 1395 22 -3 - 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229919.peg.1964 CDS AZTY01000412.1 39 494 3 + 456 Metal-dependent hydrolase - none -
fig|6666666.229919.peg.1965 CDS AZTY01000412.1 594 466 -3 - 129 hypothetical protein - none -
fig|6666666.229919.peg.1966 CDS AZTY01000413.1 23 172 2 + 150 hypothetical protein - none -
fig|6666666.229919.peg.1967 CDS AZTY01000414.1 756 28 -3 - 729 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229919.peg.1968 CDS AZTY01000414.1 1693 761 -1 - 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229919.peg.1969 CDS AZTY01000415.1 918 334 -3 - 585 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229919.peg.1970 CDS AZTY01000416.1 39 314 3 + 276 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229919.peg.1971 CDS AZTY01000416.1 445 323 -1 - 123 hypothetical protein - none -
fig|6666666.229919.peg.1972 CDS AZTY01000417.1 67 198 1 + 132 hypothetical protein - none -
fig|6666666.229919.peg.1973 CDS AZTY01000418.1 64 936 1 + 873 Lysyl-lysine 2,3-aminomutase - none -
fig|6666666.229919.peg.1974 CDS AZTY01000419.1 62 472 2 + 411 Mercuric resistance operon regulatory protein - none -
fig|6666666.229919.peg.1975 CDS AZTY01000421.1 835 155 -1 - 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229919.peg.1976 CDS AZTY01000421.1 1142 861 -2 - 282 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229919.peg.1977 CDS AZTY01000422.1 14 514 2 + 501 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229919.peg.1978 CDS AZTY01000422.1 498 1358 3 + 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229919.peg.1979 CDS AZTY01000422.1 1358 2131 2 + 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229919.peg.1980 CDS AZTY01000422.1 2178 3359 3 + 1182 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229919.peg.1981 CDS AZTY01000422.1 3483 4379 3 + 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229919.peg.1982 CDS AZTY01000423.1 12 461 3 + 450 Protein involved in cell division - none -
fig|6666666.229919.peg.1983 CDS AZTY01000423.1 474 1358 3 + 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Ribosome biogenesis bacterial
fig|6666666.229919.peg.1984 CDS AZTY01000425.1 1334 876 -2 - 459 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229919.peg.1985 CDS AZTY01000426.1 66 278 3 + 213 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229919.peg.1986 CDS AZTY01000426.1 290 910 2 + 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229919.peg.1987 CDS AZTY01000426.1 1728 1021 -3 - 708 ABC transporter ATP-binding protein - none -
fig|6666666.229919.peg.1988 CDS AZTY01000427.1 36 239 3 + 204 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229919.peg.1989 CDS AZTY01000427.1 996 340 -3 - 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
tRNA modification Bacteria
fig|6666666.229919.peg.1990 CDS AZTY01000429.1 10 750 1 + 741 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229919.peg.1991 CDS AZTY01000429.1 828 1760 3 + 933 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229919.peg.1992 CDS AZTY01000429.1 1760 2002 2 + 243 putative ORF-4 - none -
fig|6666666.229919.peg.1993 CDS AZTY01000429.1 1986 2234 3 + 249 FIG01055344: hypothetical protein - none -
fig|6666666.229919.peg.1994 CDS AZTY01000430.1 1044 169 -3 - 876 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229919.peg.1995 CDS AZTY01000430.1 1528 1112 -1 - 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1
fig|6666666.229919.peg.1996 CDS AZTY01000430.1 2200 1541 -1 - 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229919.peg.1997 CDS AZTY01000430.1 2239 2829 1 + 591 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229919.peg.1998 CDS AZTY01000430.1 3391 2834 -1 - 558 Transcriptional regulator, AraC family - none -
fig|6666666.229919.peg.1999 CDS AZTY01000432.1 241 540 1 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.229919.peg.2000 CDS AZTY01000434.1 1 141 1 + 141 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229919.peg.2001 CDS AZTY01000435.1 970 239 -1 - 732 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229919.peg.2002 CDS AZTY01000436.1 1239 784 -3 - 456 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229919.rna.1 RNA AZTY01000006.1 189 1207 3 + 1019 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229919.rna.2 RNA AZTY01000007.1 865 792 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.229919.rna.3 RNA AZTY01000008.1 12869 12796 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.229919.rna.4 RNA AZTY01000009.1 1 1915 1 + 1915 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229919.rna.5 RNA AZTY01000009.1 1 2037 1 + 2037 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229919.rna.6 RNA AZTY01000009.1 2285 2400 2 + 116 5S RNA - none -
fig|6666666.229919.rna.7 RNA AZTY01000024.1 2078 1992 -2 - 87 tRNA-Ser-TGA - none -
fig|6666666.229919.rna.8 RNA AZTY01000025.1 540 612 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229919.rna.9 RNA AZTY01000025.1 624 694 3 + 71 tRNA-Cys-GCA tRNAs
fig|6666666.229919.rna.10 RNA AZTY01000025.1 2689 2617 -1 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.229919.rna.11 RNA AZTY01000033.1 10017 9944 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.229919.rna.12 RNA AZTY01000034.1 155 1694 2 + 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229919.rna.13 RNA AZTY01000035.1 233 161 -2 - 73 tRNA-Ala-TGC - none -
fig|6666666.229919.rna.14 RNA AZTY01000035.1 359 286 -2 - 74 tRNA-Ile-GAT - none -
fig|6666666.229919.rna.15 RNA AZTY01000038.1 376 303 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.229919.rna.16 RNA AZTY01000051.1 6745 6673 -1 - 73 tRNA-Val-TAC - none -
fig|6666666.229919.rna.17 RNA AZTY01000051.1 8558 8630 2 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.229919.rna.18 RNA AZTY01000055.1 1703 1621 -2 - 83 tRNA-Leu-CAA tRNAs
fig|6666666.229919.rna.19 RNA AZTY01000069.1 10295 10367 2 + 73 tRNA-Asn-GTT - none -
fig|6666666.229919.rna.20 RNA AZTY01000070.1 6397 6467 1 + 71 tRNA-Pseudo-AAC - none -
fig|6666666.229919.rna.21 RNA AZTY01000076.1 2134 2206 1 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.229919.rna.22 RNA AZTY01000076.1 2214 2286 3 + 73 tRNA-Asn-GTT - none -
fig|6666666.229919.rna.23 RNA AZTY01000079.1 5913 5840 -3 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.229919.rna.24 RNA AZTY01000079.1 6044 5971 -2 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.229919.rna.25 RNA AZTY01000079.1 6155 6065 -2 - 91 tRNA-Ser-GCT - none -
fig|6666666.229919.rna.26 RNA AZTY01000089.1 10381 10454 1 + 74 tRNA-Arg-CCG tRNAs
fig|6666666.229919.rna.27 RNA AZTY01000089.1 10489 10561 1 + 73 tRNA-His-GTG - none -
fig|6666666.229919.rna.28 RNA AZTY01000089.1 10567 10640 1 + 74 tRNA-Pro-TGG - none -
fig|6666666.229919.rna.29 RNA AZTY01000098.1 58 1 -1 - 58 tRNA-Asp-GTC - none -
fig|6666666.229919.rna.30 RNA AZTY01000124.1 21547 21620 1 + 74 tRNA-Pro-TGG - none -
fig|6666666.229919.rna.31 RNA AZTY01000124.1 21657 21730 3 + 74 tRNA-Arg-TCT - none -
fig|6666666.229919.rna.32 RNA AZTY01000145.1 58 1 -1 - 58 tRNA-Asp-GTC - none -
fig|6666666.229919.rna.33 RNA AZTY01000145.1 191 72 -2 - 120 5S RNA - none -
fig|6666666.229919.rna.34 RNA AZTY01000157.1 231 158 -3 - 74 tRNA-Lys-CTT - none -
fig|6666666.229919.rna.35 RNA AZTY01000157.1 332 260 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.229919.rna.36 RNA AZTY01000157.1 435 363 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.229919.rna.37 RNA AZTY01000169.1 1082 1168 2 + 87 tRNA-Ser-GGA tRNAs
fig|6666666.229919.rna.38 RNA AZTY01000179.1 4447 4375 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.229919.rna.39 RNA AZTY01000179.1 4585 4502 -1 - 84 tRNA-Leu-TAA - none -
fig|6666666.229919.rna.40 RNA AZTY01000179.1 4662 4590 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229919.rna.41 RNA AZTY01000284.1 4811 4721 -2 - 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229919.rna.42 RNA AZTY01000320.1 8678 8595 -2 - 84 tRNA-Leu-CAG tRNAs
fig|6666666.229919.rna.43 RNA AZTY01000347.1 1047 974 -3 - 74 tRNA-Val-GAC tRNAs
fig|6666666.229919.rna.44 RNA AZTY01000364.1 3618 3536 -3 - 83 tRNA-Leu-GAG tRNAs
fig|6666666.229919.rna.45 RNA AZTY01000366.1 384 313 -3 - 72 tRNA-Gln-TTG - none -
fig|6666666.229919.rna.46 RNA AZTY01000366.1 496 425 -1 - 72 tRNA-Gln-TTG - none -
fig|6666666.229919.rna.47 RNA AZTY01000366.1 610 529 -1 - 82 tRNA-Leu-TAG - none -
fig|6666666.229919.rna.48 RNA AZTY01000366.1 692 619 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.229919.rna.49 RNA AZTY01000407.1 236 164 -2 - 73 tRNA-Thr-GGT - none -
fig|6666666.229919.rna.50 RNA AZTY01000407.1 314 243 -2 - 72 tRNA-Gly-TCC - none -
fig|6666666.229919.rna.51 RNA AZTY01000407.1 439 358 -1 - 82 tRNA-Tyr-GTA - none -
fig|6666666.229919.rna.52 RNA AZTY01000407.1 545 473 -2 - 73 tRNA-Thr-TGT - none -