fig|6666666.229920.peg.1 CDS AZTX01000001.1 248 1438 2 + 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229920.peg.2 CDS AZTX01000001.1 1407 1538 3 + 132 hypothetical protein - none -
fig|6666666.229920.peg.3 CDS AZTX01000001.1 1562 3100 2 + 1539 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229920.peg.4 CDS AZTX01000001.1 3122 4012 2 + 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229920.peg.5 CDS AZTX01000001.1 4106 6157 2 + 2052 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229920.peg.6 CDS AZTX01000001.1 6142 6258 1 + 117 hypothetical protein - none -
fig|6666666.229920.peg.7 CDS AZTX01000001.1 7257 6217 -3 - 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229920.peg.8 CDS AZTX01000001.1 9271 7241 -1 - 2031 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229920.peg.9 CDS AZTX01000001.1 10351 9323 -1 - 1029 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229920.peg.10 CDS AZTX01000001.1 10523 10362 -2 - 162 hypothetical protein - none -
fig|6666666.229920.peg.11 CDS AZTX01000003.1 131 1057 2 + 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229920.peg.12 CDS AZTX01000003.1 1227 2354 3 + 1128 Fic family protein - none -
fig|6666666.229920.peg.13 CDS AZTX01000003.1 2374 3417 1 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229920.peg.14 CDS AZTX01000003.1 3535 5430 1 + 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229920.peg.15 CDS AZTX01000003.1 6159 5524 -3 - 636 Cytochrome c-type protein NapC - none -
fig|6666666.229920.peg.16 CDS AZTX01000003.1 6622 6173 -1 - 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229920.peg.17 CDS AZTX01000003.1 7541 6660 -2 - 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229920.peg.18 CDS AZTX01000003.1 8380 7541 -1 - 840 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229920.peg.19 CDS AZTX01000003.1 10914 8428 -3 - 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229920.peg.20 CDS AZTX01000003.1 11232 10948 -3 - 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229920.peg.21 CDS AZTX01000003.1 11462 11298 -2 - 165 hypothetical protein - none -
fig|6666666.229920.peg.22 CDS AZTX01000003.1 11508 13211 3 + 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229920.peg.23 CDS AZTX01000003.1 13226 14251 2 + 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229920.peg.24 CDS AZTX01000003.1 14267 14581 2 + 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229920.peg.25 CDS AZTX01000004.1 988 134 -1 - 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation;
KDO2-Lipid A biosynthesis
fig|6666666.229920.peg.26 CDS AZTX01000004.1 1897 998 -1 - 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229920.peg.27 CDS AZTX01000004.1 3019 1937 -1 - 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229920.peg.28 CDS AZTX01000004.1 3615 3160 -3 - 456 Outer membrane lipoprotein - none -
fig|6666666.229920.peg.29 CDS AZTX01000004.1 4244 3657 -2 - 588 Protein yecM - none -
fig|6666666.229920.peg.30 CDS AZTX01000004.1 4341 6074 3 + 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229920.peg.31 CDS AZTX01000004.1 7639 6680 -1 - 960 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229920.peg.32 CDS AZTX01000004.1 7712 8191 2 + 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229920.peg.33 CDS AZTX01000004.1 10050 8305 -3 - 1746 Ferrichrome-iron receptor - none -
fig|6666666.229920.peg.34 CDS AZTX01000004.1 12242 10104 -2 - 2139 Ferrichrome-iron receptor - none -
fig|6666666.229920.peg.35 CDS AZTX01000005.1 79 1881 1 + 1803 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229920.peg.36 CDS AZTX01000005.1 2351 2130 -2 - 222 probable transcription regulator - none -
fig|6666666.229920.peg.37 CDS AZTX01000006.1 5337 847 -3 - 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229920.peg.38 CDS AZTX01000006.1 6077 5337 -2 - 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229920.peg.39 CDS AZTX01000006.1 9559 6098 -1 - 3462 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229920.peg.40 CDS AZTX01000007.1 74 436 2 + 363 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229920.peg.41 CDS AZTX01000008.1 741 433 -3 - 309 FIG074102: hypothetical protein - none -
fig|6666666.229920.peg.42 CDS AZTX01000008.1 1041 781 -3 - 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229920.peg.43 CDS AZTX01000008.1 1996 1091 -1 - 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229920.peg.44 CDS AZTX01000008.1 2350 2141 -1 - 210 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229920.peg.45 CDS AZTX01000008.1 2978 2364 -2 - 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229920.peg.46 CDS AZTX01000008.1 3851 3012 -2 - 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229920.peg.47 CDS AZTX01000008.1 4470 3853 -3 - 618 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229920.peg.48 CDS AZTX01000008.1 6901 4481 -1 - 2421 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229920.peg.49 CDS AZTX01000009.1 1579 749 -1 - 831 5-deoxy-glucuronate isomerase (EC 5.3.1.-) Inositol catabolism
fig|6666666.229920.peg.50 CDS AZTX01000010.1 4094 45 -2 - 4050 HrpA-like helicases - none -
fig|6666666.229920.peg.51 CDS AZTX01000010.1 4480 4091 -1 - 390 COG2363 - none -
fig|6666666.229920.peg.52 CDS AZTX01000010.1 5083 4481 -1 - 603 putative membrane protein - none -
fig|6666666.229920.peg.53 CDS AZTX01000010.1 5387 5058 -2 - 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229920.peg.54 CDS AZTX01000010.1 6745 5705 -1 - 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229920.peg.55 CDS AZTX01000011.1 175 1053 1 + 879 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229920.peg.56 CDS AZTX01000011.1 2317 1109 -1 - 1209 Sodium/glutamate symport protein - none -
fig|6666666.229920.peg.57 CDS AZTX01000011.1 2917 2483 -1 - 435 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229920.peg.58 CDS AZTX01000011.1 3744 2914 -3 - 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229920.peg.59 CDS AZTX01000011.1 4214 3741 -2 - 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229920.peg.60 CDS AZTX01000011.1 4885 4217 -1 - 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229920.peg.61 CDS AZTX01000011.1 5011 6510 1 + 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229920.peg.62 CDS AZTX01000011.1 6848 7663 2 + 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229920.peg.63 CDS AZTX01000011.1 8645 7752 -2 - 894 Transcriptional regulator, LysR family - none -
fig|6666666.229920.peg.64 CDS AZTX01000011.1 8828 9673 2 + 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229920.peg.65 CDS AZTX01000011.1 9737 10717 2 + 981 Aldo-keto reductase - none -
fig|6666666.229920.peg.66 CDS AZTX01000011.1 10943 12598 2 + 1656 Carboxylesterase type B - none -
fig|6666666.229920.peg.67 CDS AZTX01000011.1 12735 13844 3 + 1110 Putative exported protein precursor - none -
fig|6666666.229920.peg.68 CDS AZTX01000011.1 14873 13983 -2 - 891 Transcriptional regulator, LysR family - none -
fig|6666666.229920.peg.69 CDS AZTX01000011.1 14973 15404 3 + 432 FIG01220323: hypothetical protein - none -
fig|6666666.229920.peg.70 CDS AZTX01000011.1 15388 16029 1 + 642 FIG01220323: hypothetical protein - none -
fig|6666666.229920.peg.71 CDS AZTX01000011.1 18013 16181 -1 - 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229920.peg.72 CDS AZTX01000011.1 18864 18067 -3 - 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229920.peg.73 CDS AZTX01000011.1 19262 18990 -2 - 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229920.peg.74 CDS AZTX01000011.1 20019 19429 -3 - 591 FIG01200173: hypothetical protein - none -
fig|6666666.229920.peg.75 CDS AZTX01000011.1 21101 20037 -2 - 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229920.peg.76 CDS AZTX01000011.1 21989 21270 -2 - 720 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229920.peg.77 CDS AZTX01000011.1 22682 22038 -2 - 645 converved hypothetical protein - none -
fig|6666666.229920.peg.78 CDS AZTX01000011.1 22940 24556 2 + 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.229920.peg.79 CDS AZTX01000011.1 26168 24621 -2 - 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229920.peg.80 CDS AZTX01000011.1 30052 26171 -1 - 3882 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229920.peg.81 CDS AZTX01000011.1 31939 30080 -1 - 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229920.peg.82 CDS AZTX01000011.1 32636 32007 -2 - 630 Nitrate/nitrite response regulator protein - none -
fig|6666666.229920.peg.83 CDS AZTX01000011.1 35147 32646 -2 - 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229920.peg.84 CDS AZTX01000011.1 35303 36229 2 + 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229920.peg.85 CDS AZTX01000011.1 36243 36989 3 + 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229920.peg.86 CDS AZTX01000011.1 37020 38405 3 + 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229920.peg.87 CDS AZTX01000011.1 38418 39668 3 + 1251 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229920.peg.88 CDS AZTX01000011.1 40474 39737 -1 - 738 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229920.peg.89 CDS AZTX01000012.1 1640 912 -2 - 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.90 CDS AZTX01000012.1 2133 1690 -3 - 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.91 CDS AZTX01000012.1 3349 2126 -1 - 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.92 CDS AZTX01000012.1 3837 3358 -3 - 480 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.93 CDS AZTX01000012.1 6240 3967 -3 - 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.94 CDS AZTX01000012.1 6831 6247 -3 - 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.95 CDS AZTX01000012.1 7274 6828 -2 - 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.96 CDS AZTX01000012.1 8197 7271 -1 - 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.97 CDS AZTX01000012.1 8916 8194 -3 - 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.98 CDS AZTX01000012.1 10277 8916 -2 - 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.99 CDS AZTX01000012.1 10819 10274 -1 - 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.100 CDS AZTX01000012.1 12512 10845 -2 - 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.101 CDS AZTX01000012.1 12763 12512 -1 - 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.102 CDS AZTX01000012.1 13029 12766 -3 - 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.103 CDS AZTX01000012.1 13795 13007 -1 - 789 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.104 CDS AZTX01000012.1 14523 13780 -3 - 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.105 CDS AZTX01000012.1 14904 15329 3 + 426 Excinuclease ATPase subunit - none -
fig|6666666.229920.peg.106 CDS AZTX01000012.1 16144 15431 -1 - 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229920.peg.107 CDS AZTX01000012.1 17049 16159 -3 - 891 Tyrosine recombinase XerC - none -
fig|6666666.229920.peg.108 CDS AZTX01000012.1 17883 17059 -3 - 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229920.peg.109 CDS AZTX01000012.1 18141 17962 -3 - 180 hypothetical protein - none -
fig|6666666.229920.peg.110 CDS AZTX01000012.1 19169 18141 -2 - 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229920.peg.111 CDS AZTX01000012.1 19352 19852 2 + 501 hypothetical protein - none -
fig|6666666.229920.peg.112 CDS AZTX01000012.1 19825 19974 1 + 150 hypothetical protein - none -
fig|6666666.229920.peg.113 CDS AZTX01000012.1 22523 19953 -2 - 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229920.peg.114 CDS AZTX01000013.1 187 585 1 + 399 hypothetical protein - none -
fig|6666666.229920.peg.115 CDS AZTX01000013.1 1338 811 -3 - 528 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229920.peg.116 CDS AZTX01000013.1 2514 1663 -3 - 852 Thymidylate synthase (EC 2.1.1.45) pyrimidine conversions
fig|6666666.229920.peg.117 CDS AZTX01000013.1 3308 2511 -2 - 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229920.peg.118 CDS AZTX01000013.1 4114 3317 -1 - 798 Protein of unknown function DUF81 - none -
fig|6666666.229920.peg.119 CDS AZTX01000013.1 4716 4117 -3 - 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229920.peg.120 CDS AZTX01000013.1 4936 5355 1 + 420 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229920.peg.121 CDS AZTX01000013.1 5366 6874 2 + 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229920.peg.122 CDS AZTX01000013.1 6871 7836 1 + 966 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229920.peg.123 CDS AZTX01000013.1 7858 8730 1 + 873 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229920.peg.124 CDS AZTX01000013.1 8812 9744 1 + 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229920.peg.125 CDS AZTX01000013.1 10052 9843 -2 - 210 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.229920.peg.126 CDS AZTX01000014.1 118 1212 1 + 1095 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229920.peg.127 CDS AZTX01000014.1 1289 2017 2 + 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229920.peg.128 CDS AZTX01000014.1 3681 2107 -3 - 1575 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229920.peg.129 CDS AZTX01000014.1 4695 3730 -3 - 966 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229920.peg.130 CDS AZTX01000015.1 146 2380 2 + 2235 hypothetical protein - none -
fig|6666666.229920.peg.131 CDS AZTX01000015.1 2359 3543 1 + 1185 hypothetical protein - none -
fig|6666666.229920.peg.132 CDS AZTX01000015.1 7094 3618 -2 - 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229920.peg.133 CDS AZTX01000015.1 7059 7238 3 + 180 hypothetical protein - none -
fig|6666666.229920.peg.134 CDS AZTX01000015.1 7293 9080 3 + 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229920.peg.135 CDS AZTX01000015.1 9097 9213 1 + 117 hypothetical protein - none -
fig|6666666.229920.peg.136 CDS AZTX01000016.1 1353 385 -3 - 969 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229920.peg.137 CDS AZTX01000016.1 2232 1357 -3 - 876 DnaJ-like protein DjlA - none -
fig|6666666.229920.peg.138 CDS AZTX01000016.1 2958 2314 -3 - 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229920.peg.139 CDS AZTX01000016.1 3684 2968 -3 - 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229920.peg.140 CDS AZTX01000016.1 3802 4665 1 + 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229920.peg.141 CDS AZTX01000016.1 4693 5580 1 + 888 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229920.peg.142 CDS AZTX01000016.1 5699 6088 2 + 390 Patatin-like phospholipase - none -
fig|6666666.229920.peg.143 CDS AZTX01000016.1 6163 6885 1 + 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229920.peg.144 CDS AZTX01000016.1 6934 7047 1 + 114 hypothetical protein - none -
fig|6666666.229920.peg.145 CDS AZTX01000016.1 7040 7888 2 + 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229920.peg.146 CDS AZTX01000016.1 8196 8882 3 + 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229920.peg.147 CDS AZTX01000016.1 8884 10200 1 + 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229920.peg.148 CDS AZTX01000016.1 10210 12441 1 + 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229920.peg.149 CDS AZTX01000016.1 12467 12823 2 + 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229920.peg.150 CDS AZTX01000016.1 12839 13498 2 + 660 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229920.peg.151 CDS AZTX01000016.1 14317 13517 -1 - 801 Orf2 - none -
fig|6666666.229920.peg.152 CDS AZTX01000016.1 14356 14481 1 + 126 hypothetical protein - none -
fig|6666666.229920.peg.153 CDS AZTX01000016.1 17569 14471 -1 - 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229920.peg.154 CDS AZTX01000016.1 18779 17583 -2 - 1197 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229920.peg.155 CDS AZTX01000016.1 19371 18805 -3 - 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229920.peg.156 CDS AZTX01000017.1 110 1612 2 + 1503 Sodium-dependent transporter - none -
fig|6666666.229920.peg.157 CDS AZTX01000017.1 2138 2782 2 + 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229920.peg.158 CDS AZTX01000017.1 3873 2869 -3 - 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229920.peg.159 CDS AZTX01000018.1 988 59 -1 - 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229920.peg.160 CDS AZTX01000018.1 2431 1001 -1 - 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229920.peg.161 CDS AZTX01000018.1 3566 2502 -2 - 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229920.peg.162 CDS AZTX01000018.1 4796 3606 -2 - 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229920.peg.163 CDS AZTX01000018.1 6115 4811 -1 - 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229920.peg.164 CDS AZTX01000018.1 7227 6142 -3 - 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229920.peg.165 CDS AZTX01000018.1 8549 7221 -2 - 1329 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229920.peg.166 CDS AZTX01000018.1 10071 8605 -3 - 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229920.peg.167 CDS AZTX01000018.1 11912 10089 -2 - 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229920.peg.168 CDS AZTX01000018.1 12100 11930 -1 - 171 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229920.peg.169 CDS AZTX01000018.1 13215 12247 -3 - 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229920.peg.170 CDS AZTX01000018.1 13783 13325 -1 - 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229920.peg.171 CDS AZTX01000018.1 15645 14047 -3 - 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229920.peg.172 CDS AZTX01000019.1 275 2227 2 + 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229920.peg.173 CDS AZTX01000019.1 2386 2793 1 + 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229920.peg.174 CDS AZTX01000019.1 2880 3533 3 + 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229920.peg.175 CDS AZTX01000019.1 3885 5237 3 + 1353 Histidine permease YuiF - none -
fig|6666666.229920.peg.176 CDS AZTX01000019.1 5301 5867 3 + 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229920.peg.177 CDS AZTX01000019.1 7349 5925 -2 - 1425 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229920.peg.178 CDS AZTX01000019.1 7457 7576 2 + 120 hypothetical protein - none -
fig|6666666.229920.peg.179 CDS AZTX01000019.1 7686 7835 3 + 150 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) CBSS-87626.3.peg.3639;
Ubiquinone Biosynthesis
fig|6666666.229920.peg.180 CDS AZTX01000019.1 8582 7851 -2 - 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229920.peg.181 CDS AZTX01000019.1 9555 8584 -3 - 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229920.peg.182 CDS AZTX01000019.1 9937 10131 1 + 195 LSU ribosomal protein L21p CBSS-176279.3.peg.868
fig|6666666.229920.peg.183 CDS AZTX01000019.1 10152 10409 3 + 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868
fig|6666666.229920.peg.184 CDS AZTX01000019.1 10480 11412 1 + 933 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229920.peg.185 CDS AZTX01000019.1 11490 12407 3 + 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229920.peg.186 CDS AZTX01000019.1 12444 13619 3 + 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229920.peg.187 CDS AZTX01000019.1 13735 13616 -1 - 120 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229920.peg.188 CDS AZTX01000019.1 14169 13687 -3 - 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229920.peg.189 CDS AZTX01000020.1 73 861 1 + 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229920.peg.190 CDS AZTX01000020.1 913 1167 1 + 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229920.peg.191 CDS AZTX01000020.1 1280 1687 2 + 408 ATP synthase F0 sector subunit b (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229920.peg.192 CDS AZTX01000020.1 1701 2249 3 + 549 ATP synthase delta chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229920.peg.193 CDS AZTX01000020.1 2262 3803 3 + 1542 ATP synthase alpha chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229920.peg.194 CDS AZTX01000020.1 3819 4688 3 + 870 ATP synthase gamma chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229920.peg.195 CDS AZTX01000020.1 4705 6078 1 + 1374 ATP synthase beta chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229920.peg.196 CDS AZTX01000020.1 6120 6548 3 + 429 ATP synthase epsilon chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229920.peg.197 CDS AZTX01000020.1 7655 6609 -2 - 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229920.peg.198 CDS AZTX01000020.1 8734 7820 -1 - 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229920.peg.199 CDS AZTX01000020.1 9861 8731 -3 - 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229920.peg.200 CDS AZTX01000020.1 9947 11317 2 + 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229920.peg.201 CDS AZTX01000020.1 12540 11449 -3 - 1092 Putative exported protein precursor - none -
fig|6666666.229920.peg.202 CDS AZTX01000020.1 13427 12678 -2 - 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229920.peg.203 CDS AZTX01000020.1 13850 13455 -2 - 396 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229920.peg.204 CDS AZTX01000021.1 917 117 -2 - 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229920.peg.205 CDS AZTX01000021.1 1004 1621 2 + 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229920.peg.206 CDS AZTX01000021.1 1627 3042 1 + 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229920.peg.207 CDS AZTX01000021.1 3051 6374 3 + 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229920.peg.208 CDS AZTX01000021.1 6396 7469 3 + 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229920.peg.209 CDS AZTX01000021.1 7490 8362 2 + 873 Murein endopeptidase - none -
fig|6666666.229920.peg.210 CDS AZTX01000021.1 8366 9133 2 + 768 Putative membrane protein YfcA - none -
fig|6666666.229920.peg.211 CDS AZTX01000021.1 9249 10205 3 + 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229920.peg.212 CDS AZTX01000021.1 10227 10838 3 + 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229920.peg.213 CDS AZTX01000021.1 11115 10990 -3 - 126 hypothetical protein - none -
fig|6666666.229920.peg.214 CDS AZTX01000022.1 85 225 1 + 141 hypothetical protein - none -
fig|6666666.229920.peg.215 CDS AZTX01000022.1 809 177 -2 - 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229920.peg.216 CDS AZTX01000022.1 980 2305 2 + 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229920.peg.217 CDS AZTX01000022.1 2320 2460 1 + 141 hypothetical protein - none -
fig|6666666.229920.peg.218 CDS AZTX01000022.1 2716 2423 -1 - 294 AagD - none -
fig|6666666.229920.peg.219 CDS AZTX01000022.1 3954 2719 -3 - 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229920.peg.220 CDS AZTX01000022.1 5879 3963 -2 - 1917 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229920.peg.221 CDS AZTX01000022.1 8282 5895 -2 - 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229920.peg.222 CDS AZTX01000023.1 171 55 -3 - 117 hypothetical protein - none -
fig|6666666.229920.peg.223 CDS AZTX01000023.1 1599 181 -3 - 1419 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229920.peg.224 CDS AZTX01000023.1 2746 1619 -1 - 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229920.peg.225 CDS AZTX01000023.1 5054 2748 -2 - 2307 ABC-type multidrug transport system, permease component - none -
fig|6666666.229920.peg.226 CDS AZTX01000024.1 575 1336 2 + 762 DUF1526 domain-containing protein - none -
fig|6666666.229920.peg.227 CDS AZTX01000024.1 2503 1943 -1 - 561 Cytolethal distending toxin subunit C - none -
fig|6666666.229920.peg.228 CDS AZTX01000024.1 3365 2514 -2 - 852 Cytolethal distending toxin subunit B - none -
fig|6666666.229920.peg.229 CDS AZTX01000025.1 989 66 -2 - 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229920.peg.230 CDS AZTX01000025.1 1441 989 -1 - 453 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229920.peg.231 CDS AZTX01000025.1 2085 1540 -3 - 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229920.peg.232 CDS AZTX01000025.1 4072 2114 -1 - 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229920.peg.233 CDS AZTX01000025.1 4590 4072 -3 - 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229920.peg.234 CDS AZTX01000025.1 4760 4587 -2 - 174 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229920.peg.235 CDS AZTX01000025.1 5548 4811 -1 - 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229920.peg.236 CDS AZTX01000025.1 6224 5559 -2 - 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229920.peg.237 CDS AZTX01000025.1 6864 6229 -3 - 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229920.peg.238 CDS AZTX01000025.1 7989 7036 -3 - 954 Bicyclomycin resistance protein - none -
fig|6666666.229920.peg.239 CDS AZTX01000025.1 8229 8029 -3 - 201 Permeases of the major facilitator superfamily - none -
fig|6666666.229920.peg.240 CDS AZTX01000025.1 8935 8234 -1 - 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229920.peg.241 CDS AZTX01000026.1 13 489 1 + 477 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229920.peg.242 CDS AZTX01000026.1 983 516 -2 - 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229920.peg.243 CDS AZTX01000026.1 1404 1285 -3 - 120 hypothetical protein - none -
fig|6666666.229920.peg.244 CDS AZTX01000026.1 3711 1585 -3 - 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229920.peg.245 CDS AZTX01000027.1 3202 401 -1 - 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229920.peg.246 CDS AZTX01000027.1 3419 3982 2 + 564 Outer membrane protein 18/16 - none -
fig|6666666.229920.peg.247 CDS AZTX01000027.1 4086 4316 3 + 231 FIG00696102: hypothetical protein - none -
fig|6666666.229920.peg.248 CDS AZTX01000027.1 4326 6341 3 + 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229920.peg.249 CDS AZTX01000027.1 7237 6857 -1 - 381 FIG00782409: hypothetical protein - none -
fig|6666666.229920.peg.250 CDS AZTX01000027.1 7365 7967 3 + 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229920.peg.251 CDS AZTX01000027.1 7967 8572 2 + 606 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229920.peg.252 CDS AZTX01000027.1 8575 9060 1 + 486 Putative membrane protein - none -
fig|6666666.229920.peg.253 CDS AZTX01000028.1 12 1343 3 + 1332 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229920.peg.254 CDS AZTX01000028.1 2193 1414 -3 - 780 Protein of unknown function DUF419 - none -
fig|6666666.229920.peg.255 CDS AZTX01000028.1 2423 3880 2 + 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229920.peg.256 CDS AZTX01000028.1 4095 4349 3 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.257 CDS AZTX01000028.1 4346 4498 2 + 153 StbE replicon stabilization toxin - none -
fig|6666666.229920.peg.258 CDS AZTX01000028.1 4482 4628 3 + 147 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.259 CDS AZTX01000028.1 5426 4641 -2 - 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229920.peg.260 CDS AZTX01000028.1 5979 5587 -3 - 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229920.peg.261 CDS AZTX01000028.1 6424 5996 -1 - 429 LSU ribosomal protein L13p (L13Ae) - none -
fig|6666666.229920.peg.262 CDS AZTX01000028.1 7262 6666 -2 - 597 hypothetical protein - none -
fig|6666666.229920.peg.263 CDS AZTX01000028.1 9254 7275 -2 - 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229920.peg.264 CDS AZTX01000028.1 12919 9254 -1 - 3666 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229920.peg.265 CDS AZTX01000028.1 13346 12990 -2 - 357 DsrE-related protein - none -
fig|6666666.229920.peg.266 CDS AZTX01000029.1 300 1958 3 + 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229920.peg.267 CDS AZTX01000029.1 2208 3425 3 + 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229920.peg.268 CDS AZTX01000029.1 3422 4249 2 + 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229920.peg.269 CDS AZTX01000029.1 5796 4261 -3 - 1536 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.229920.peg.270 CDS AZTX01000029.1 6525 5911 -3 - 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229920.peg.271 CDS AZTX01000029.1 6535 6648 1 + 114 hypothetical protein - none -
fig|6666666.229920.peg.272 CDS AZTX01000029.1 6658 7533 1 + 876 Membrane protein LAPB - none -
fig|6666666.229920.peg.273 CDS AZTX01000029.1 8105 7629 -2 - 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) Biotin synthesis cluster;
RNA methylation
fig|6666666.229920.peg.274 CDS AZTX01000029.1 8721 8224 -3 - 498 Phospholipid-binding protein - none -
fig|6666666.229920.peg.275 CDS AZTX01000029.1 9669 8827 -3 - 843 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229920.peg.276 CDS AZTX01000029.1 10381 9704 -1 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229920.peg.277 CDS AZTX01000029.1 11408 10371 -2 - 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229920.peg.278 CDS AZTX01000030.1 1539 157 -3 - 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229920.peg.279 CDS AZTX01000030.1 1602 1772 3 + 171 hypothetical protein - none -
fig|6666666.229920.peg.280 CDS AZTX01000030.1 2140 1730 -1 - 411 probable membrane protein YPO3565 - none -
fig|6666666.229920.peg.281 CDS AZTX01000030.1 4073 2310 -2 - 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229920.peg.282 CDS AZTX01000030.1 5374 4169 -1 - 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229920.peg.283 CDS AZTX01000030.1 5550 5888 3 + 339 FIG00904093: hypothetical protein - none -
fig|6666666.229920.peg.284 CDS AZTX01000031.1 151 798 1 + 648 Outer membrane protein W precursor - none -
fig|6666666.229920.peg.285 CDS AZTX01000031.1 2542 866 -1 - 1677 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229920.peg.286 CDS AZTX01000031.1 3533 2616 -2 - 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229920.peg.287 CDS AZTX01000031.1 3718 3578 -1 - 141 hypothetical protein - none -
fig|6666666.229920.peg.288 CDS AZTX01000031.1 3674 4252 2 + 579 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229920.peg.289 CDS AZTX01000031.1 5810 4362 -2 - 1449 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229920.peg.290 CDS AZTX01000031.1 7433 6018 -2 - 1416 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229920.peg.291 CDS AZTX01000031.1 9641 7623 -2 - 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229920.peg.292 CDS AZTX01000031.1 9811 11031 1 + 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229920.peg.293 CDS AZTX01000031.1 11172 13019 3 + 1848 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229920.peg.294 CDS AZTX01000031.1 14104 13094 -1 - 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229920.peg.295 CDS AZTX01000031.1 15164 14082 -2 - 1083 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229920.peg.296 CDS AZTX01000031.1 15650 15171 -2 - 480 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229920.peg.297 CDS AZTX01000031.1 16717 15725 -1 - 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229920.peg.298 CDS AZTX01000032.1 18 659 3 + 642 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229920.peg.299 CDS AZTX01000035.1 160 2589 1 + 2430 DNA internalization-related competence protein ComEC/Rec2 KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229920.peg.300 CDS AZTX01000035.1 2636 4384 2 + 1749 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229920.peg.301 CDS AZTX01000035.1 4403 5377 2 + 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229920.peg.302 CDS AZTX01000035.1 5399 5578 2 + 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229920.peg.303 CDS AZTX01000035.1 5580 6353 3 + 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229920.peg.304 CDS AZTX01000035.1 6482 8311 2 + 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229920.peg.305 CDS AZTX01000035.1 9789 8698 -3 - 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229920.peg.306 CDS AZTX01000036.1 127 1170 1 + 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229920.peg.307 CDS AZTX01000036.1 1238 2392 2 + 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229920.peg.308 CDS AZTX01000036.1 2386 3417 1 + 1032 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229920.peg.309 CDS AZTX01000036.1 5181 3682 -3 - 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229920.peg.310 CDS AZTX01000038.1 36 1229 3 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229920.peg.311 CDS AZTX01000038.1 1236 2570 3 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229920.peg.312 CDS AZTX01000038.1 3430 2576 -1 - 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229920.peg.313 CDS AZTX01000038.1 3991 3458 -1 - 534 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229920.peg.314 CDS AZTX01000038.1 4720 3995 -1 - 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229920.peg.315 CDS AZTX01000038.1 5244 4726 -3 - 519 LptA, protein essential for LPS transport across the periplasm KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229920.peg.316 CDS AZTX01000038.1 5800 5225 -1 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229920.peg.317 CDS AZTX01000038.1 5913 5797 -3 - 117 hypothetical protein - none -
fig|6666666.229920.peg.318 CDS AZTX01000038.1 6083 6880 2 + 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229920.peg.319 CDS AZTX01000038.1 6874 7659 1 + 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229920.peg.320 CDS AZTX01000038.1 7682 8191 2 + 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229920.peg.321 CDS AZTX01000038.1 8220 8861 3 + 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229920.peg.322 CDS AZTX01000038.1 8955 9224 3 + 270 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229920.peg.323 CDS AZTX01000038.1 9224 9481 2 + 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229920.peg.324 CDS AZTX01000038.1 9498 10775 3 + 1278 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229920.peg.325 CDS AZTX01000038.1 11127 10837 -3 - 291 FIG00696346: hypothetical protein - none -
fig|6666666.229920.peg.326 CDS AZTX01000038.1 11332 12762 1 + 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229920.peg.327 CDS AZTX01000038.1 12839 13378 2 + 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229920.peg.328 CDS AZTX01000038.1 13375 14043 1 + 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229920.peg.329 CDS AZTX01000038.1 14108 14833 2 + 726 Integral membrane protein TerC - none -
fig|6666666.229920.peg.330 CDS AZTX01000038.1 16351 14942 -1 - 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229920.peg.331 CDS AZTX01000040.1 634 35 -1 - 600 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229920.peg.332 CDS AZTX01000040.1 809 612 -2 - 198 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229920.peg.333 CDS AZTX01000040.1 2309 813 -2 - 1497 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229920.peg.334 CDS AZTX01000040.1 3382 2384 -1 - 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229920.peg.335 CDS AZTX01000040.1 3640 4959 1 + 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229920.peg.336 CDS AZTX01000040.1 5009 6370 2 + 1362 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229920.peg.337 CDS AZTX01000040.1 7139 7336 2 + 198 hypothetical protein - none -
fig|6666666.229920.peg.338 CDS AZTX01000041.1 30 1256 3 + 1227 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229920.peg.339 CDS AZTX01000041.1 1280 2656 2 + 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229920.peg.340 CDS AZTX01000042.1 870 19 -3 - 852 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229920.peg.341 CDS AZTX01000042.1 1736 867 -2 - 870 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229920.peg.342 CDS AZTX01000042.1 2803 1733 -1 - 1071 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229920.peg.343 CDS AZTX01000042.1 4140 3031 -3 - 1110 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229920.peg.344 CDS AZTX01000043.1 234 16 -3 - 219 hypothetical protein - none -
fig|6666666.229920.peg.345 CDS AZTX01000043.1 373 2283 1 + 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229920.peg.346 CDS AZTX01000043.1 2276 2806 2 + 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229920.peg.347 CDS AZTX01000043.1 2803 3852 1 + 1050 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229920.peg.348 CDS AZTX01000043.1 3849 5045 3 + 1197 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229920.peg.349 CDS AZTX01000043.1 5778 5203 -3 - 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229920.peg.350 CDS AZTX01000044.1 255 115 -3 - 141 Mobile element protein - none -
fig|6666666.229920.peg.351 CDS AZTX01000044.1 613 338 -1 - 276 Mobile element protein - none -
fig|6666666.229920.peg.352 CDS AZTX01000045.1 115 765 1 + 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229920.peg.353 CDS AZTX01000045.1 775 1359 1 + 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229920.peg.354 CDS AZTX01000045.1 1360 2562 1 + 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229920.peg.355 CDS AZTX01000045.1 2564 3760 2 + 1197 Sugar efflux transporter SotB - none -
fig|6666666.229920.peg.356 CDS AZTX01000047.1 1597 89 -1 - 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229920.peg.357 CDS AZTX01000047.1 2556 1654 -3 - 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229920.peg.358 CDS AZTX01000047.1 2836 2675 -1 - 162 hypothetical protein - none -
fig|6666666.229920.peg.359 CDS AZTX01000048.1 550 140 -1 - 411 Mercuric resistance operon regulatory protein - none -
fig|6666666.229920.peg.360 CDS AZTX01000048.1 982 671 -1 - 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229920.peg.361 CDS AZTX01000048.1 1074 1391 3 + 318 hypothetical protein - none -
fig|6666666.229920.peg.362 CDS AZTX01000049.1 193 2331 1 + 2139 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229920.peg.363 CDS AZTX01000049.1 2772 2428 -3 - 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229920.peg.364 CDS AZTX01000049.1 3174 2782 -3 - 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229920.peg.365 CDS AZTX01000049.1 3956 3186 -2 - 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229920.peg.366 CDS AZTX01000049.1 5769 3961 -3 - 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229920.peg.367 CDS AZTX01000049.1 6078 7049 3 + 972 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229920.peg.368 CDS AZTX01000049.1 7882 7115 -1 - 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229920.peg.369 CDS AZTX01000049.1 8865 7882 -3 - 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229920.peg.370 CDS AZTX01000049.1 9854 8865 -2 - 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229920.peg.371 CDS AZTX01000049.1 10747 9854 -1 - 894 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229920.peg.372 CDS AZTX01000049.1 11886 10816 -3 - 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229920.peg.373 CDS AZTX01000049.1 11957 12400 2 + 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229920.peg.374 CDS AZTX01000049.1 12485 13087 2 + 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229920.peg.375 CDS AZTX01000049.1 13119 15056 3 + 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229920.peg.376 CDS AZTX01000049.1 15229 15558 1 + 330 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.229920.peg.377 CDS AZTX01000050.1 267 1 -3 - 267 Protein yihD - none -
fig|6666666.229920.peg.378 CDS AZTX01000050.1 351 935 3 + 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229920.peg.379 CDS AZTX01000050.1 1034 1564 2 + 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229920.peg.380 CDS AZTX01000050.1 1676 3205 2 + 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229920.peg.381 CDS AZTX01000050.1 3208 4149 1 + 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229920.peg.382 CDS AZTX01000050.1 4154 5818 2 + 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229920.peg.383 CDS AZTX01000050.1 5882 6118 2 + 237 hypothetical protein - none -
fig|6666666.229920.peg.384 CDS AZTX01000050.1 6177 6314 3 + 138 hypothetical protein - none -
fig|6666666.229920.peg.385 CDS AZTX01000050.1 6724 6323 -1 - 402 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229920.peg.386 CDS AZTX01000050.1 6964 7290 1 + 327 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229920.peg.387 CDS AZTX01000050.1 7485 7709 3 + 225 hypothetical protein - none -
fig|6666666.229920.peg.388 CDS AZTX01000051.1 71 1972 2 + 1902 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229920.peg.389 CDS AZTX01000051.1 2407 3534 1 + 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229920.peg.390 CDS AZTX01000051.1 3959 3612 -2 - 348 Programmed cell death toxin ChpB - none -
fig|6666666.229920.peg.391 CDS AZTX01000052.1 27 284 3 + 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229920.peg.392 CDS AZTX01000052.1 401 2128 2 + 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229920.peg.393 CDS AZTX01000052.1 2189 2689 2 + 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229920.peg.394 CDS AZTX01000052.1 4854 2815 -3 - 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229920.peg.395 CDS AZTX01000053.1 220 3330 1 + 3111 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229920.peg.398 CDS AZTX01000053.1 3428 4258 2 + 831 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229920.peg.399 CDS AZTX01000053.1 4251 4964 3 + 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229920.peg.400 CDS AZTX01000053.1 5114 5230 2 + 117 hypothetical protein - none -
fig|6666666.229920.peg.401 CDS AZTX01000053.1 7870 5585 -1 - 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229920.peg.402 CDS AZTX01000054.1 1048 80 -1 - 969 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229920.peg.403 CDS AZTX01000054.1 1917 1123 -3 - 795 FIG001154: CcsA-related protein - none -
fig|6666666.229920.peg.404 CDS AZTX01000054.1 2071 3450 1 + 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229920.peg.405 CDS AZTX01000054.1 3737 3618 -2 - 120 hypothetical protein - none -
fig|6666666.229920.peg.406 CDS AZTX01000054.1 4920 4090 -3 - 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229920.peg.407 CDS AZTX01000054.1 6057 4933 -3 - 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229920.peg.408 CDS AZTX01000054.1 6195 6602 3 + 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229920.peg.409 CDS AZTX01000054.1 7465 6716 -1 - 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229920.peg.410 CDS AZTX01000054.1 9054 7687 -3 - 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229920.peg.411 CDS AZTX01000054.1 9689 9078 -2 - 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229920.peg.412 CDS AZTX01000054.1 9802 10212 1 + 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229920.peg.413 CDS AZTX01000054.1 10351 10887 1 + 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229920.peg.414 CDS AZTX01000054.1 10954 11886 1 + 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229920.peg.415 CDS AZTX01000054.1 11964 12827 3 + 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229920.peg.416 CDS AZTX01000054.1 12843 13670 3 + 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229920.peg.417 CDS AZTX01000054.1 13761 14180 3 + 420 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229920.peg.418 CDS AZTX01000054.1 14164 14457 1 + 294 nucleotidyltransferase - none -
fig|6666666.229920.peg.419 CDS AZTX01000054.1 14485 15042 1 + 558 FIG00696423: hypothetical protein - none -
fig|6666666.229920.peg.420 CDS AZTX01000054.1 14997 15113 3 + 117 hypothetical protein - none -
fig|6666666.229920.peg.421 CDS AZTX01000054.1 15085 15255 1 + 171 hypothetical protein - none -
fig|6666666.229920.peg.422 CDS AZTX01000054.1 15233 17821 2 + 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229920.peg.423 CDS AZTX01000054.1 17974 17846 -1 - 129 hypothetical protein - none -
fig|6666666.229920.peg.424 CDS AZTX01000054.1 17963 18466 2 + 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229920.peg.425 CDS AZTX01000054.1 18466 19500 1 + 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229920.peg.426 CDS AZTX01000055.1 57 440 3 + 384 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229920.peg.427 CDS AZTX01000055.1 604 2400 1 + 1797 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229920.peg.428 CDS AZTX01000055.1 2411 3433 2 + 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229920.peg.429 CDS AZTX01000055.1 3440 4120 2 + 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229920.peg.430 CDS AZTX01000055.1 4117 5025 1 + 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.229920.peg.431 CDS AZTX01000055.1 6484 5129 -1 - 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229920.peg.432 CDS AZTX01000055.1 8223 6613 -3 - 1611 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229920.peg.433 CDS AZTX01000055.1 8507 8244 -2 - 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229920.peg.434 CDS AZTX01000055.1 8797 8462 -1 - 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229920.peg.435 CDS AZTX01000055.1 8977 8843 -1 - 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229920.peg.436 CDS AZTX01000056.1 139 504 1 + 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229920.peg.437 CDS AZTX01000056.1 560 955 2 + 396 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229920.peg.438 CDS AZTX01000056.1 1028 2098 2 + 1071 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229920.peg.439 CDS AZTX01000057.1 77 853 2 + 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229920.peg.440 CDS AZTX01000057.1 862 2052 1 + 1191 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229920.peg.441 CDS AZTX01000057.1 2052 2933 3 + 882 Glycosyltransferase - none -
fig|6666666.229920.peg.442 CDS AZTX01000057.1 3002 3811 2 + 810 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229920.peg.443 CDS AZTX01000057.1 3961 3800 -1 - 162 hypothetical protein - none -
fig|6666666.229920.peg.444 CDS AZTX01000057.1 3951 4946 3 + 996 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229920.peg.445 CDS AZTX01000057.1 4973 5776 2 + 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229920.peg.446 CDS AZTX01000057.1 5776 6564 1 + 789 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229920.peg.447 CDS AZTX01000059.1 130 612 1 + 483 FxsA protein - none -
fig|6666666.229920.peg.448 CDS AZTX01000059.1 699 989 3 + 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229920.peg.449 CDS AZTX01000060.1 63 422 3 + 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229920.peg.450 CDS AZTX01000060.1 422 1114 2 + 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229920.peg.451 CDS AZTX01000060.1 1116 2468 3 + 1353 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.229920.peg.452 CDS AZTX01000060.1 2798 2505 -2 - 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229920.peg.453 CDS AZTX01000060.1 3102 2800 -3 - 303 FIG022160: hypothetical toxin - none -
fig|6666666.229920.peg.454 CDS AZTX01000060.1 3261 3142 -3 - 120 hypothetical protein - none -
fig|6666666.229920.peg.455 CDS AZTX01000060.1 3255 5201 3 + 1947 ABC transporter ATP-binding protein - none -
fig|6666666.229920.peg.456 CDS AZTX01000061.1 55 480 1 + 426 Universal stress protein A Universal stress protein family
fig|6666666.229920.peg.457 CDS AZTX01000061.1 680 3304 2 + 2625 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229920.peg.458 CDS AZTX01000061.1 3427 3609 1 + 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229920.peg.459 CDS AZTX01000061.1 3641 5005 2 + 1365 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229920.peg.460 CDS AZTX01000061.1 5081 5968 2 + 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229920.peg.461 CDS AZTX01000061.1 6123 6440 3 + 318 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229920.peg.462 CDS AZTX01000061.1 6528 6397 -3 - 132 hypothetical protein - none -
fig|6666666.229920.peg.463 CDS AZTX01000061.1 6527 7261 2 + 735 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229920.peg.464 CDS AZTX01000061.1 7279 7836 1 + 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229920.peg.465 CDS AZTX01000061.1 7836 8255 3 + 420 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.229920.peg.466 CDS AZTX01000061.1 9662 8352 -2 - 1311 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.229920.peg.467 CDS AZTX01000061.1 9847 9731 -1 - 117 hypothetical protein - none -
fig|6666666.229920.peg.468 CDS AZTX01000061.1 10071 9931 -3 - 141 hypothetical protein - none -
fig|6666666.229920.peg.469 CDS AZTX01000061.1 11453 10302 -2 - 1152 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229920.peg.470 CDS AZTX01000061.1 11971 11714 -1 - 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229920.peg.471 CDS AZTX01000061.1 13138 12050 -1 - 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229920.peg.472 CDS AZTX01000061.1 13284 13135 -3 - 150 hypothetical protein - none -
fig|6666666.229920.peg.473 CDS AZTX01000061.1 14524 13289 -1 - 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229920.peg.474 CDS AZTX01000061.1 15132 14536 -3 - 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229920.peg.475 CDS AZTX01000061.1 15765 15136 -3 - 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229920.peg.476 CDS AZTX01000061.1 16550 15765 -2 - 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229920.peg.477 CDS AZTX01000061.1 17778 16543 -3 - 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229920.peg.478 CDS AZTX01000061.1 19121 17781 -2 - 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229920.peg.479 CDS AZTX01000061.1 19313 19146 -2 - 168 hypothetical protein - none -
fig|6666666.229920.peg.480 CDS AZTX01000061.1 19467 19351 -3 - 117 hypothetical protein - none -
fig|6666666.229920.peg.481 CDS AZTX01000061.1 19788 19477 -3 - 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229920.peg.482 CDS AZTX01000061.1 19892 20485 2 + 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229920.peg.483 CDS AZTX01000061.1 20591 20466 -2 - 126 hypothetical protein - none -
fig|6666666.229920.peg.484 CDS AZTX01000062.1 369 1325 3 + 957 hypothetical protein - none -
fig|6666666.229920.peg.485 CDS AZTX01000062.1 1382 1750 2 + 369 hypothetical protein - none -
fig|6666666.229920.peg.486 CDS AZTX01000062.1 1771 3849 1 + 2079 hypothetical protein - none -
fig|6666666.229920.peg.487 CDS AZTX01000062.1 3862 4206 1 + 345 hypothetical protein - none -
fig|6666666.229920.peg.488 CDS AZTX01000062.1 4206 5072 3 + 867 hypothetical protein - none -
fig|6666666.229920.peg.489 CDS AZTX01000062.1 6356 5142 -2 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229920.peg.490 CDS AZTX01000062.1 6618 6845 3 + 228 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229920.peg.491 CDS AZTX01000062.1 7372 7109 -1 - 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229920.peg.492 CDS AZTX01000062.1 7499 8233 2 + 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229920.peg.493 CDS AZTX01000062.1 8252 9157 2 + 906 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229920.peg.494 CDS AZTX01000062.1 9210 9401 3 + 192 hypothetical protein - none -
fig|6666666.229920.peg.495 CDS AZTX01000062.1 10058 9453 -2 - 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229920.peg.496 CDS AZTX01000062.1 11556 10162 -3 - 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229920.peg.497 CDS AZTX01000062.1 11766 12215 3 + 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229920.peg.498 CDS AZTX01000062.1 12254 12568 2 + 315 RNA-binding domain protein - none -
fig|6666666.229920.peg.499 CDS AZTX01000062.1 12640 15504 1 + 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229920.peg.500 CDS AZTX01000063.1 174 2612 3 + 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.501 CDS AZTX01000063.1 2988 2653 -3 - 336 ABC transporter, ATP-binding protein - none -
fig|6666666.229920.peg.502 CDS AZTX01000063.1 4496 2985 -2 - 1512 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229920.peg.503 CDS AZTX01000063.1 5153 4584 -2 - 570 transcriptional regulator MtrA - none -
fig|6666666.229920.peg.504 CDS AZTX01000064.1 1581 49 -3 - 1533 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229920.peg.505 CDS AZTX01000064.1 1869 2852 3 + 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229920.peg.506 CDS AZTX01000064.1 2875 3165 1 + 291 hypothetical protein - none -
fig|6666666.229920.peg.507 CDS AZTX01000064.1 4528 3230 -1 - 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229920.peg.508 CDS AZTX01000064.1 5581 4616 -1 - 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229920.peg.509 CDS AZTX01000064.1 7115 5595 -2 - 1521 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229920.peg.510 CDS AZTX01000064.1 7255 8730 1 + 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229920.peg.511 CDS AZTX01000064.1 8847 9494 3 + 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229920.peg.512 CDS AZTX01000064.1 9510 10208 3 + 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229920.peg.513 CDS AZTX01000065.1 150 737 3 + 588 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229920.peg.514 CDS AZTX01000065.1 798 2042 3 + 1245 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229920.peg.515 CDS AZTX01000065.1 2126 3406 2 + 1281 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229920.peg.516 CDS AZTX01000066.1 3218 1098 -2 - 2121 unknown - none -
fig|6666666.229920.peg.517 CDS AZTX01000067.1 1192 80 -1 - 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229920.peg.518 CDS AZTX01000067.1 1365 3425 3 + 2061 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229920.peg.519 CDS AZTX01000067.1 3753 3559 -3 - 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229920.peg.520 CDS AZTX01000067.1 4094 3753 -2 - 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229920.peg.521 CDS AZTX01000067.1 5965 4106 -1 - 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229920.peg.522 CDS AZTX01000067.1 6507 5986 -3 - 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229920.peg.523 CDS AZTX01000067.1 6842 6519 -2 - 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229920.peg.524 CDS AZTX01000067.1 7357 6974 -1 - 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229920.peg.525 CDS AZTX01000067.1 8631 7417 -3 - 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229920.peg.526 CDS AZTX01000067.1 9158 8685 -2 - 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229920.peg.527 CDS AZTX01000068.1 550 1233 1 + 684 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229920.peg.528 CDS AZTX01000069.1 784 227 -1 - 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.529 CDS AZTX01000069.1 1039 2229 1 + 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229920.peg.530 CDS AZTX01000070.1 311 1957 2 + 1647 ABC transporter ATP-binding protein - none -
fig|6666666.229920.peg.531 CDS AZTX01000070.1 2948 2061 -2 - 888 putative adhesin/invasin - none -
fig|6666666.229920.peg.532 CDS AZTX01000071.1 1235 270 -2 - 966 NrfD protein - none -
fig|6666666.229920.peg.533 CDS AZTX01000071.1 1909 1232 -1 - 678 NrfC protein - none -
fig|6666666.229920.peg.534 CDS AZTX01000071.1 2571 1906 -3 - 666 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229920.peg.535 CDS AZTX01000071.1 4168 2645 -1 - 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229920.peg.536 CDS AZTX01000072.1 1027 95 -1 - 933 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229920.peg.537 CDS AZTX01000072.1 2682 1105 -3 - 1578 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229920.peg.538 CDS AZTX01000072.1 2950 3213 1 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229920.peg.539 CDS AZTX01000072.1 4000 3323 -1 - 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229920.peg.540 CDS AZTX01000072.1 4076 5020 2 + 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229920.peg.541 CDS AZTX01000072.1 5031 5522 3 + 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229920.peg.542 CDS AZTX01000072.1 5651 6235 2 + 585 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229920.peg.543 CDS AZTX01000072.1 6424 7515 1 + 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229920.peg.544 CDS AZTX01000072.1 7851 8432 3 + 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229920.peg.545 CDS AZTX01000072.1 8504 8650 2 + 147 hypothetical protein - none -
fig|6666666.229920.peg.546 CDS AZTX01000072.1 9817 8870 -1 - 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229920.peg.547 CDS AZTX01000072.1 10755 9931 -3 - 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229920.peg.548 CDS AZTX01000072.1 10800 11933 3 + 1134 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229920.peg.549 CDS AZTX01000072.1 12043 11930 -1 - 114 hypothetical protein - none -
fig|6666666.229920.peg.550 CDS AZTX01000072.1 12037 14052 1 + 2016 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229920.peg.551 CDS AZTX01000072.1 14699 14121 -2 - 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229920.peg.552 CDS AZTX01000072.1 14935 14702 -1 - 234 unknown - none -
fig|6666666.229920.peg.553 CDS AZTX01000072.1 16028 15000 -2 - 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ;
YrdC-YciO-Sua5 protein family
fig|6666666.229920.peg.554 CDS AZTX01000072.1 16218 16051 -3 - 168 hypothetical protein - none -
fig|6666666.229920.peg.555 CDS AZTX01000072.1 16253 16468 2 + 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229920.peg.556 CDS AZTX01000072.1 16590 18347 3 + 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229920.peg.557 CDS AZTX01000072.1 18423 20273 3 + 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229920.peg.558 CDS AZTX01000072.1 20668 20940 1 + 273 Phage integrase - none -
fig|6666666.229920.peg.559 CDS AZTX01000074.1 35 1087 2 + 1053 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229920.peg.560 CDS AZTX01000074.1 1947 1090 -3 - 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229920.peg.561 CDS AZTX01000074.1 2157 1987 -3 - 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent - none -
fig|6666666.229920.peg.562 CDS AZTX01000074.1 2342 2169 -2 - 174 LSU ribosomal protein L28p - none -
fig|6666666.229920.peg.563 CDS AZTX01000074.1 3251 2592 -2 - 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229920.peg.564 CDS AZTX01000074.1 3454 3302 -1 - 153 hypothetical protein - none -
fig|6666666.229920.peg.565 CDS AZTX01000074.1 3429 4628 3 + 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229920.peg.566 CDS AZTX01000074.1 4697 5152 2 + 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229920.peg.567 CDS AZTX01000074.1 5152 5751 1 + 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229920.peg.568 CDS AZTX01000074.1 5775 5993 3 + 219 FIG00696234: hypothetical protein - none -
fig|6666666.229920.peg.569 CDS AZTX01000074.1 6031 6675 1 + 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229920.peg.570 CDS AZTX01000074.1 8178 6808 -3 - 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229920.peg.571 CDS AZTX01000074.1 9118 8273 -1 - 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229920.peg.572 CDS AZTX01000074.1 11639 9213 -2 - 2427 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229920.peg.573 CDS AZTX01000075.1 309 773 3 + 465 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229920.peg.574 CDS AZTX01000075.1 935 1633 2 + 699 unknown - none -
fig|6666666.229920.peg.575 CDS AZTX01000075.1 1637 3559 2 + 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229920.peg.576 CDS AZTX01000075.1 3600 3773 3 + 174 hypothetical protein - none -
fig|6666666.229920.peg.577 CDS AZTX01000075.1 4230 7700 3 + 3471 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229920.peg.578 CDS AZTX01000076.1 80 661 2 + 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229920.peg.579 CDS AZTX01000076.1 1847 735 -2 - 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229920.peg.580 CDS AZTX01000076.1 2843 2031 -2 - 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229920.peg.581 CDS AZTX01000076.1 2989 3675 1 + 687 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.229920.peg.582 CDS AZTX01000076.1 3787 4371 1 + 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229920.peg.583 CDS AZTX01000076.1 4758 4558 -3 - 201 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Riboflavin synthesis cluster
fig|6666666.229920.peg.584 CDS AZTX01000076.1 6283 4868 -1 - 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229920.peg.585 CDS AZTX01000076.1 6397 8031 1 + 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229920.peg.586 CDS AZTX01000076.1 10211 8100 -2 - 2112 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229920.peg.587 CDS AZTX01000077.1 1001 195 -2 - 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229920.peg.588 CDS AZTX01000077.1 2197 1004 -1 - 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229920.peg.589 CDS AZTX01000077.1 2944 2207 -1 - 738 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229920.peg.590 CDS AZTX01000077.1 2932 3144 1 + 213 hypothetical protein - none -
fig|6666666.229920.peg.591 CDS AZTX01000077.1 3650 4330 2 + 681 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229920.peg.592 CDS AZTX01000077.1 4382 6094 2 + 1713 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229920.peg.593 CDS AZTX01000078.1 122 748 2 + 627 membrane protein ykgB - none -
fig|6666666.229920.peg.594 CDS AZTX01000078.1 818 1699 2 + 882 Transcriptional regulator, AraC family - none -
fig|6666666.229920.peg.595 CDS AZTX01000078.1 2294 1704 -2 - 591 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229920.peg.596 CDS AZTX01000078.1 2333 2992 2 + 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229920.peg.597 CDS AZTX01000078.1 3005 3421 2 + 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229920.peg.598 CDS AZTX01000078.1 3489 4364 3 + 876 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229920.peg.599 CDS AZTX01000079.1 1115 183 -2 - 933 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.229920.peg.600 CDS AZTX01000079.1 3099 1366 -3 - 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229920.peg.601 CDS AZTX01000079.1 4934 3099 -2 - 1836 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229920.peg.602 CDS AZTX01000079.1 5921 4968 -2 - 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229920.peg.603 CDS AZTX01000079.1 6838 5981 -1 - 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229920.peg.604 CDS AZTX01000079.1 8289 7558 -3 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229920.peg.605 CDS AZTX01000079.1 9519 8305 -3 - 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229920.peg.606 CDS AZTX01000079.1 9648 10304 3 + 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229920.peg.607 CDS AZTX01000079.1 11847 10405 -3 - 1443 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229920.peg.608 CDS AZTX01000079.1 12007 12483 1 + 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229920.peg.609 CDS AZTX01000079.1 12861 12559 -3 - 303 FIG004454: RNA binding protein - none -
fig|6666666.229920.peg.610 CDS AZTX01000079.1 13029 13328 3 + 300 Phage-related protein - none -
fig|6666666.229920.peg.611 CDS AZTX01000079.1 13325 13621 2 + 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229920.peg.612 CDS AZTX01000079.1 14268 13654 -3 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229920.peg.613 CDS AZTX01000079.1 14295 15692 3 + 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229920.peg.614 CDS AZTX01000080.1 229 348 1 + 120 hypothetical protein - none -
fig|6666666.229920.peg.615 CDS AZTX01000080.1 1225 446 -1 - 780 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229920.peg.616 CDS AZTX01000080.1 3699 1234 -3 - 2466 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229920.peg.617 CDS AZTX01000080.1 3899 6832 2 + 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229920.peg.618 CDS AZTX01000080.1 7167 6868 -3 - 300 Putative transcriptional regulator - none -
fig|6666666.229920.peg.619 CDS AZTX01000080.1 7514 7164 -2 - 351 YPPCP.09C homologue - none -
fig|6666666.229920.peg.620 CDS AZTX01000080.1 9284 7701 -2 - 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229920.peg.621 CDS AZTX01000080.1 9354 9470 3 + 117 hypothetical protein - none -
fig|6666666.229920.peg.622 CDS AZTX01000080.1 9641 10468 2 + 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229920.peg.623 CDS AZTX01000080.1 10556 11893 2 + 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229920.peg.624 CDS AZTX01000080.1 12084 12329 3 + 246 FIG00696862: hypothetical protein - none -
fig|6666666.229920.peg.625 CDS AZTX01000080.1 12562 14331 1 + 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229920.peg.626 CDS AZTX01000080.1 15398 14457 -2 - 942 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229920.peg.627 CDS AZTX01000080.1 15851 15423 -2 - 429 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229920.peg.628 CDS AZTX01000080.1 16266 15820 -3 - 447 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229920.peg.629 CDS AZTX01000080.1 16480 16235 -1 - 246 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229920.peg.630 CDS AZTX01000080.1 17034 16618 -3 - 417 Protein ygiW precursor - none -
fig|6666666.229920.peg.631 CDS AZTX01000080.1 17406 18323 3 + 918 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229920.peg.632 CDS AZTX01000080.1 20495 18519 -2 - 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229920.peg.633 CDS AZTX01000080.1 20725 21624 1 + 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229920.peg.634 CDS AZTX01000080.1 21684 22649 3 + 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229920.peg.635 CDS AZTX01000080.1 22657 23580 1 + 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229920.peg.636 CDS AZTX01000080.1 23592 24350 3 + 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229920.peg.637 CDS AZTX01000080.1 24354 24491 3 + 138 hypothetical protein - none -
fig|6666666.229920.peg.638 CDS AZTX01000080.1 25989 24457 -3 - 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229920.peg.639 CDS AZTX01000081.1 557 18 -2 - 540 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229920.peg.640 CDS AZTX01000081.1 597 2057 3 + 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229920.peg.641 CDS AZTX01000081.1 2892 2137 -3 - 756 Short chain dehydrogenase - none -
fig|6666666.229920.peg.642 CDS AZTX01000081.1 3497 2946 -2 - 552 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229920.peg.643 CDS AZTX01000081.1 4015 3578 -1 - 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229920.peg.644 CDS AZTX01000081.1 4981 4025 -1 - 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229920.peg.645 CDS AZTX01000081.1 5648 5064 -2 - 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229920.peg.646 CDS AZTX01000081.1 5973 5692 -3 - 282 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229920.peg.647 CDS AZTX01000081.1 6654 6400 -3 - 255 YgfY COG2938 - none -
fig|6666666.229920.peg.648 CDS AZTX01000081.1 7023 6694 -3 - 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229920.peg.649 CDS AZTX01000081.1 8805 7090 -3 - 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229920.peg.650 CDS AZTX01000081.1 8955 10349 3 + 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229920.peg.651 CDS AZTX01000081.1 10346 12205 2 + 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229920.peg.652 CDS AZTX01000081.1 12251 13153 2 + 903 hypothetical protein - none -
fig|6666666.229920.peg.653 CDS AZTX01000082.1 1053 337 -3 - 717 COG1720: Uncharacterized conserved protein tRNA modification Bacteria
fig|6666666.229920.peg.654 CDS AZTX01000082.1 1183 2127 1 + 945 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229920.peg.655 CDS AZTX01000082.1 2178 2678 3 + 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229920.peg.656 CDS AZTX01000082.1 2699 2863 2 + 165 hypothetical protein - none -
fig|6666666.229920.peg.657 CDS AZTX01000082.1 2868 4259 3 + 1392 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229920.peg.658 CDS AZTX01000082.1 4895 4317 -2 - 579 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229920.peg.659 CDS AZTX01000082.1 4967 6328 2 + 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229920.peg.660 CDS AZTX01000082.1 6567 7106 3 + 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229920.peg.661 CDS AZTX01000082.1 8316 7177 -3 - 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229920.peg.662 CDS AZTX01000082.1 9398 8313 -2 - 1086 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229920.peg.663 CDS AZTX01000083.1 883 146 -1 - 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229920.peg.664 CDS AZTX01000083.1 3285 880 -3 - 2406 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229920.peg.665 CDS AZTX01000084.1 1549 575 -1 - 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229920.peg.666 CDS AZTX01000084.1 1652 2218 2 + 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229920.peg.667 CDS AZTX01000084.1 2374 3318 1 + 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229920.peg.668 CDS AZTX01000085.1 66 416 3 + 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229920.peg.669 CDS AZTX01000085.1 417 770 3 + 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229920.peg.670 CDS AZTX01000085.1 772 1818 1 + 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229920.peg.671 CDS AZTX01000085.1 1820 2752 2 + 933 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229920.peg.672 CDS AZTX01000085.1 2836 2997 1 + 162 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229920.peg.673 CDS AZTX01000085.1 4062 3097 -3 - 966 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229920.peg.674 CDS AZTX01000085.1 5045 4137 -2 - 909 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229920.peg.675 CDS AZTX01000085.1 5611 5045 -1 - 567 FIG00696199: hypothetical protein - none -
fig|6666666.229920.peg.676 CDS AZTX01000085.1 6392 5613 -2 - 780 UPF0246 protein YaaA - none -
fig|6666666.229920.peg.677 CDS AZTX01000086.1 7 507 1 + 501 Type IV pilin PilA Type IV pilus
fig|6666666.229920.peg.678 CDS AZTX01000086.1 534 1943 3 + 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229920.peg.679 CDS AZTX01000086.1 1936 3159 1 + 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229920.peg.680 CDS AZTX01000086.1 3159 3845 3 + 687 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229920.peg.681 CDS AZTX01000086.1 4014 4193 3 + 180 hypothetical protein - none -
fig|6666666.229920.peg.682 CDS AZTX01000086.1 4532 5350 2 + 819 hypothetical protein - none -
fig|6666666.229920.peg.683 CDS AZTX01000086.1 5343 7493 3 + 2151 hypothetical protein - none -
fig|6666666.229920.peg.684 CDS AZTX01000086.1 7496 8506 2 + 1011 hypothetical protein - none -
fig|6666666.229920.peg.685 CDS AZTX01000086.1 8515 8691 1 + 177 hypothetical protein - none -
fig|6666666.229920.peg.686 CDS AZTX01000087.1 974 141 -2 - 834 Cell division protein - none -
fig|6666666.229920.peg.687 CDS AZTX01000087.1 3324 1084 -3 - 2241 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229920.peg.688 CDS AZTX01000088.1 45 377 3 + 333 hypothetical protein - none -
fig|6666666.229920.peg.689 CDS AZTX01000088.1 419 754 2 + 336 hypothetical protein - none -
fig|6666666.229920.peg.690 CDS AZTX01000089.1 95 694 2 + 600 Hydrogenase-4 component A - none -
fig|6666666.229920.peg.691 CDS AZTX01000089.1 980 2749 2 + 1770 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229920.peg.692 CDS AZTX01000089.1 2757 3722 3 + 966 Hydrogenase-4 component C (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229920.peg.693 CDS AZTX01000089.1 3735 5180 3 + 1446 Na(+) H(+) antiporter subunit A - none -
fig|6666666.229920.peg.694 CDS AZTX01000089.1 5191 5829 1 + 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229920.peg.695 CDS AZTX01000089.1 5834 7372 2 + 1539 Hydrogenase-4 component F - none -
fig|6666666.229920.peg.696 CDS AZTX01000089.1 7392 9122 3 + 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229920.peg.697 CDS AZTX01000089.1 9136 9783 1 + 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229920.peg.698 CDS AZTX01000089.1 9780 10556 3 + 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229920.peg.699 CDS AZTX01000089.1 10638 11042 3 + 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229920.peg.700 CDS AZTX01000089.1 11032 11493 1 + 462 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) Hydrogenases
fig|6666666.229920.peg.701 CDS AZTX01000090.1 610 98 -1 - 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis;
Transport system clustering with HemG
fig|6666666.229920.peg.702 CDS AZTX01000090.1 2073 610 -3 - 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229920.peg.703 CDS AZTX01000090.1 2307 2092 -3 - 216 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229920.peg.704 CDS AZTX01000090.1 2457 2338 -3 - 120 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229920.peg.705 CDS AZTX01000090.1 2606 2451 -2 - 156 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229920.peg.706 CDS AZTX01000090.1 2757 2933 3 + 177 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229920.peg.707 CDS AZTX01000090.1 2962 3210 1 + 249 FIG01200701: hypothetical protein - none -
fig|6666666.229920.peg.708 CDS AZTX01000090.1 3261 4532 3 + 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229920.peg.709 CDS AZTX01000090.1 4620 5231 3 + 612 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229920.peg.710 CDS AZTX01000090.1 5238 5351 3 + 114 hypothetical protein - none -
fig|6666666.229920.peg.711 CDS AZTX01000090.1 5361 6581 3 + 1221 Tyrosine-specific transport protein - none -
fig|6666666.229920.peg.712 CDS AZTX01000091.1 121 1812 1 + 1692 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229920.peg.713 CDS AZTX01000091.1 1923 2210 3 + 288 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.714 CDS AZTX01000091.1 2220 2516 3 + 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.715 CDS AZTX01000091.1 2629 2513 -1 - 117 hypothetical protein - none -
fig|6666666.229920.peg.716 CDS AZTX01000091.1 2583 2984 3 + 402 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229920.peg.717 CDS AZTX01000092.1 133 333 1 + 201 hypothetical protein - none -
fig|6666666.229920.peg.718 CDS AZTX01000092.1 976 311 -1 - 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229920.peg.719 CDS AZTX01000092.1 1488 1177 -3 - 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229920.peg.720 CDS AZTX01000092.1 1986 1495 -3 - 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229920.peg.721 CDS AZTX01000092.1 2647 1976 -1 - 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229920.peg.722 CDS AZTX01000092.1 3788 2649 -2 - 1140 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229920.peg.723 CDS AZTX01000092.1 5100 3775 -3 - 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229920.peg.724 CDS AZTX01000092.1 6533 5103 -2 - 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229920.peg.725 CDS AZTX01000092.1 7192 6671 -1 - 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229920.peg.726 CDS AZTX01000092.1 9142 7235 -1 - 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229920.peg.727 CDS AZTX01000092.1 11834 9441 -2 - 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229920.peg.728 CDS AZTX01000092.1 12095 11880 -2 - 216 hypothetical protein - none -
fig|6666666.229920.peg.729 CDS AZTX01000092.1 12438 12097 -3 - 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229920.peg.730 CDS AZTX01000092.1 12572 13372 2 + 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229920.peg.731 CDS AZTX01000092.1 13444 16035 1 + 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229920.peg.732 CDS AZTX01000092.1 17394 16111 -3 - 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229920.peg.733 CDS AZTX01000093.1 24 185 3 + 162 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229920.peg.734 CDS AZTX01000093.1 278 895 2 + 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229920.peg.735 CDS AZTX01000093.1 908 2248 2 + 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229920.peg.736 CDS AZTX01000093.1 4412 2745 -2 - 1668 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229920.peg.737 CDS AZTX01000093.1 4719 6035 3 + 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229920.peg.738 CDS AZTX01000093.1 7011 6115 -3 - 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229920.peg.739 CDS AZTX01000093.1 8232 7135 -3 - 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229920.peg.740 CDS AZTX01000093.1 9136 8363 -1 - 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229920.peg.741 CDS AZTX01000093.1 9996 9136 -3 - 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229920.peg.742 CDS AZTX01000093.1 11098 9980 -1 - 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229920.peg.743 CDS AZTX01000094.1 155 391 2 + 237 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229920.peg.744 CDS AZTX01000094.1 467 745 2 + 279 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229920.peg.745 CDS AZTX01000094.1 757 1422 1 + 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229920.peg.746 CDS AZTX01000094.1 1425 2768 3 + 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229920.peg.747 CDS AZTX01000094.1 2786 3967 2 + 1182 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.229920.peg.748 CDS AZTX01000094.1 4532 4065 -2 - 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229920.peg.749 CDS AZTX01000094.1 6152 4623 -2 - 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229920.peg.750 CDS AZTX01000094.1 7201 6269 -1 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229920.peg.751 CDS AZTX01000094.1 8215 7211 -1 - 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229920.peg.752 CDS AZTX01000095.1 436 47 -1 - 390 LSU ribosomal protein L17p - none -
fig|6666666.229920.peg.753 CDS AZTX01000095.1 1467 478 -3 - 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229920.peg.754 CDS AZTX01000095.1 2116 1496 -1 - 621 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229920.peg.755 CDS AZTX01000095.1 2535 2146 -3 - 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229920.peg.756 CDS AZTX01000095.1 2907 2551 -3 - 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229920.peg.757 CDS AZTX01000095.1 3158 3045 -2 - 114 LSU ribosomal protein L36p - none -
fig|6666666.229920.peg.758 CDS AZTX01000095.1 4510 3185 -1 - 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229920.peg.759 CDS AZTX01000095.1 4948 4514 -1 - 435 LSU ribosomal protein L15p (L27Ae) - none -
fig|6666666.229920.peg.760 CDS AZTX01000095.1 5638 5138 -1 - 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229920.peg.761 CDS AZTX01000095.1 6007 5654 -1 - 354 LSU ribosomal protein L18p (L5e) - none -
fig|6666666.229920.peg.762 CDS AZTX01000095.1 6158 6021 -2 - 138 LSU ribosomal protein L6p (L9e) - none -
fig|6666666.229920.peg.763 CDS AZTX01000095.1 6962 6570 -2 - 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229920.peg.764 CDS AZTX01000095.1 7304 6999 -2 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229920.peg.765 CDS AZTX01000095.1 7745 7317 -2 - 429 LSU ribosomal protein L5p (L11e) - none -
fig|6666666.229920.peg.766 CDS AZTX01000095.1 8185 7874 -1 - 312 LSU ribosomal protein L24p (L26e) - none -
fig|6666666.229920.peg.767 CDS AZTX01000095.1 10204 9182 -1 - 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229920.peg.768 CDS AZTX01000095.1 10989 10225 -3 - 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229920.peg.769 CDS AZTX01000095.1 11689 11027 -1 - 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229920.peg.770 CDS AZTX01000095.1 11917 11693 -1 - 225 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229920.peg.771 CDS AZTX01000095.1 12195 12064 -3 - 132 hypothetical protein - none -
fig|6666666.229920.peg.772 CDS AZTX01000096.1 74 1456 2 + 1383 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229920.peg.773 CDS AZTX01000096.1 2701 1544 -1 - 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229920.peg.774 CDS AZTX01000096.1 3850 2768 -1 - 1083 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229920.peg.775 CDS AZTX01000096.1 4456 3851 -1 - 606 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229920.peg.776 CDS AZTX01000096.1 5056 4499 -1 - 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229920.peg.777 CDS AZTX01000096.1 5810 5088 -2 - 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229920.peg.778 CDS AZTX01000096.1 7750 5813 -1 - 1938 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229920.peg.779 CDS AZTX01000096.1 7826 8644 2 + 819 Aldose 1-epimerase - none -
fig|6666666.229920.peg.780 CDS AZTX01000096.1 8927 8796 -2 - 132 hypothetical protein - none -
fig|6666666.229920.peg.781 CDS AZTX01000096.1 9900 8998 -3 - 903 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229920.peg.782 CDS AZTX01000096.1 11269 9986 -1 - 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229920.peg.783 CDS AZTX01000096.1 12464 11346 -2 - 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229920.peg.784 CDS AZTX01000097.1 259 2574 1 + 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229920.peg.785 CDS AZTX01000097.1 4079 2622 -2 - 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229920.peg.786 CDS AZTX01000097.1 5113 4085 -1 - 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229920.peg.787 CDS AZTX01000097.1 6616 5129 -1 - 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229920.peg.788 CDS AZTX01000098.1 98 1012 2 + 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229920.peg.789 CDS AZTX01000098.1 3403 1067 -1 - 2337 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229920.peg.790 CDS AZTX01000098.1 5473 3584 -1 - 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229920.peg.791 CDS AZTX01000098.1 5784 5470 -3 - 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229920.peg.792 CDS AZTX01000098.1 5907 6026 3 + 120 hypothetical protein - none -
fig|6666666.229920.peg.793 CDS AZTX01000098.1 6044 7294 2 + 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229920.peg.794 CDS AZTX01000098.1 7952 7347 -2 - 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229920.peg.795 CDS AZTX01000098.1 8153 8713 2 + 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229920.peg.796 CDS AZTX01000098.1 8779 11121 1 + 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229920.peg.797 CDS AZTX01000099.1 142 732 1 + 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229920.peg.798 CDS AZTX01000099.1 2163 826 -3 - 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229920.peg.799 CDS AZTX01000099.1 3929 2340 -2 - 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229920.peg.800 CDS AZTX01000099.1 5047 4199 -1 - 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229920.peg.801 CDS AZTX01000099.1 5124 6842 3 + 1719 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229920.peg.802 CDS AZTX01000099.1 6852 7211 3 + 360 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229920.peg.803 CDS AZTX01000099.1 7224 7808 3 + 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
LOS core oligosaccharide biosynthesis
fig|6666666.229920.peg.804 CDS AZTX01000099.1 7873 8460 1 + 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229920.peg.805 CDS AZTX01000099.1 9258 8566 -3 - 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229920.peg.806 CDS AZTX01000099.1 9475 10545 1 + 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229920.peg.807 CDS AZTX01000099.1 10549 11190 1 + 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229920.peg.808 CDS AZTX01000099.1 11205 11687 3 + 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229920.peg.809 CDS AZTX01000099.1 12013 11819 -1 - 195 Mobile element protein - none -
fig|6666666.229920.peg.810 CDS AZTX01000099.1 12178 12044 -1 - 135 Mobile element protein - none -
fig|6666666.229920.peg.811 CDS AZTX01000099.1 12388 12185 -1 - 204 Mobile element protein - none -
fig|6666666.229920.peg.812 CDS AZTX01000099.1 12501 12689 3 + 189 hypothetical protein - none -
fig|6666666.229920.peg.813 CDS AZTX01000099.1 12971 12825 -2 - 147 hypothetical protein - none -
fig|6666666.229920.peg.814 CDS AZTX01000099.1 13065 14417 3 + 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229920.peg.815 CDS AZTX01000099.1 14447 14632 2 + 186 hypothetical protein - none -
fig|6666666.229920.peg.816 CDS AZTX01000099.1 14673 14945 3 + 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.817 CDS AZTX01000099.1 14957 15223 2 + 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.818 CDS AZTX01000099.1 15255 16814 3 + 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229920.peg.819 CDS AZTX01000100.1 107 439 2 + 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229920.peg.820 CDS AZTX01000100.1 2135 594 -2 - 1542 L-lactate permease Lactate utilization
fig|6666666.229920.peg.821 CDS AZTX01000101.1 221 1030 2 + 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229920.peg.822 CDS AZTX01000101.1 1041 1559 3 + 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229920.peg.823 CDS AZTX01000101.1 1556 2080 2 + 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229920.peg.824 CDS AZTX01000101.1 2080 2472 1 + 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229920.peg.825 CDS AZTX01000101.1 2493 3902 3 + 1410 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229920.peg.826 CDS AZTX01000101.1 4116 4643 3 + 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229920.peg.827 CDS AZTX01000101.1 4667 5755 2 + 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229920.peg.828 CDS AZTX01000101.1 5758 6612 1 + 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229920.peg.829 CDS AZTX01000102.1 142 654 1 + 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229920.peg.830 CDS AZTX01000102.1 720 1676 3 + 957 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229920.peg.831 CDS AZTX01000103.1 16 333 1 + 318 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229920.peg.832 CDS AZTX01000103.1 335 799 2 + 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229920.peg.833 CDS AZTX01000104.1 1442 363 -2 - 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229920.peg.834 CDS AZTX01000104.1 1723 1445 -1 - 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229920.peg.835 CDS AZTX01000104.1 2960 1701 -2 - 1260 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229920.peg.836 CDS AZTX01000105.1 94 1149 1 + 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229920.peg.837 CDS AZTX01000105.1 1219 2292 1 + 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229920.peg.838 CDS AZTX01000105.1 2292 2780 3 + 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229920.peg.839 CDS AZTX01000105.1 3240 2890 -3 - 351 LSU ribosomal protein L19p - none -
fig|6666666.229920.peg.840 CDS AZTX01000105.1 4015 3266 -1 - 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229920.peg.841 CDS AZTX01000105.1 4608 4081 -3 - 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229920.peg.842 CDS AZTX01000105.1 4882 4634 -1 - 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229920.peg.843 CDS AZTX01000105.1 5068 5223 1 + 156 hypothetical protein - none -
fig|6666666.229920.peg.844 CDS AZTX01000105.1 6663 5377 -3 - 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229920.peg.845 CDS AZTX01000105.1 7427 6693 -2 - 735 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229920.peg.846 CDS AZTX01000105.1 7421 7726 2 + 306 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229920.peg.847 CDS AZTX01000105.1 8020 8595 1 + 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229920.peg.848 CDS AZTX01000105.1 9421 8633 -1 - 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229920.peg.849 CDS AZTX01000105.1 9528 10502 3 + 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229920.peg.850 CDS AZTX01000105.1 10504 11241 1 + 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229920.peg.851 CDS AZTX01000105.1 11610 11759 3 + 150 hypothetical protein - none -
fig|6666666.229920.peg.852 CDS AZTX01000106.1 584 99 -2 - 486 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229920.peg.853 CDS AZTX01000106.1 754 3585 1 + 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229920.peg.854 CDS AZTX01000107.1 955 83 -1 - 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229920.peg.855 CDS AZTX01000107.1 2135 966 -2 - 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229920.peg.856 CDS AZTX01000107.1 2331 2179 -3 - 153 hypothetical protein - none -
fig|6666666.229920.peg.857 CDS AZTX01000107.1 3544 2321 -1 - 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229920.peg.858 CDS AZTX01000107.1 6477 3670 -3 - 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229920.peg.859 CDS AZTX01000107.1 6562 6684 1 + 123 hypothetical protein - none -
fig|6666666.229920.peg.860 CDS AZTX01000107.1 7394 6756 -2 - 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229920.peg.861 CDS AZTX01000107.1 7917 7471 -3 - 447 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229920.peg.862 CDS AZTX01000107.1 9604 8096 -1 - 1509 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229920.peg.863 CDS AZTX01000107.1 11739 9682 -3 - 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229920.peg.864 CDS AZTX01000107.1 12424 11813 -1 - 612 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229920.peg.865 CDS AZTX01000108.1 146 1390 2 + 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229920.peg.866 CDS AZTX01000108.1 4122 1465 -3 - 2658 Paraquat-inducible protein B Oxidative stress
fig|6666666.229920.peg.867 CDS AZTX01000108.1 5368 4085 -1 - 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229920.peg.868 CDS AZTX01000109.1 446 291 -2 - 156 hypothetical protein - none -
fig|6666666.229920.peg.869 CDS AZTX01000109.1 448 777 1 + 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229920.peg.870 CDS AZTX01000109.1 803 1483 2 + 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229920.peg.871 CDS AZTX01000109.1 1522 1845 1 + 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229920.peg.872 CDS AZTX01000109.1 1845 3014 3 + 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229920.peg.873 CDS AZTX01000109.1 3113 3769 2 + 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229920.peg.874 CDS AZTX01000109.1 3789 4652 3 + 864 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229920.peg.875 CDS AZTX01000109.1 4643 5014 2 + 372 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229920.peg.876 CDS AZTX01000109.1 5325 6371 3 + 1047 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229920.peg.877 CDS AZTX01000109.1 7099 6458 -1 - 642 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229920.peg.878 CDS AZTX01000109.1 8511 7108 -3 - 1404 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229920.peg.879 CDS AZTX01000109.1 9164 8523 -2 - 642 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229920.peg.880 CDS AZTX01000110.1 19 435 1 + 417 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229920.peg.881 CDS AZTX01000110.1 465 1157 3 + 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229920.peg.882 CDS AZTX01000110.1 1163 1480 2 + 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229920.peg.883 CDS AZTX01000110.1 1864 1514 -1 - 351 FIG00782386: hypothetical protein - none -
fig|6666666.229920.peg.884 CDS AZTX01000110.1 4595 1932 -2 - 2664 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229920.peg.885 CDS AZTX01000110.1 5203 4763 -1 - 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229920.peg.886 CDS AZTX01000110.1 5746 5222 -1 - 525 Flavodoxin 1 Flavodoxin
fig|6666666.229920.peg.887 CDS AZTX01000111.1 722 150 -2 - 573 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.229920.peg.888 CDS AZTX01000111.1 1511 852 -2 - 660 putative membrane protein - none -
fig|6666666.229920.peg.889 CDS AZTX01000111.1 1708 1592 -1 - 117 hypothetical protein - none -
fig|6666666.229920.peg.890 CDS AZTX01000111.1 1723 2529 1 + 807 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229920.peg.891 CDS AZTX01000112.1 311 580 2 + 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229920.peg.892 CDS AZTX01000112.1 597 1952 3 + 1356 FIG00732228: membrane protein - none -
fig|6666666.229920.peg.893 CDS AZTX01000112.1 1962 2786 3 + 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229920.peg.894 CDS AZTX01000112.1 2776 3720 1 + 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229920.peg.895 CDS AZTX01000112.1 4837 3887 -1 - 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p YrdC-YciO-Sua5 protein family
fig|6666666.229920.peg.896 CDS AZTX01000112.1 4900 5406 1 + 507 FIG001674: hypothetical protein - none -
fig|6666666.229920.peg.897 CDS AZTX01000112.1 7544 5403 -2 - 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229920.peg.898 CDS AZTX01000112.1 8026 7553 -1 - 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229920.peg.899 CDS AZTX01000112.1 8484 8026 -3 - 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229920.peg.900 CDS AZTX01000112.1 9227 8547 -2 - 681 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229920.peg.901 CDS AZTX01000112.1 9372 9644 3 + 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229920.peg.902 CDS AZTX01000112.1 10467 9619 -3 - 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229920.peg.903 CDS AZTX01000112.1 11321 10464 -2 - 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229920.peg.904 CDS AZTX01000112.1 12211 11321 -1 - 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229920.peg.905 CDS AZTX01000112.1 13092 12211 -3 - 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229920.peg.906 CDS AZTX01000113.1 270 386 3 + 117 hypothetical protein - none -
fig|6666666.229920.peg.907 CDS AZTX01000113.1 615 475 -3 - 141 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229920.peg.908 CDS AZTX01000113.1 1409 612 -2 - 798 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229920.peg.909 CDS AZTX01000113.1 1628 2446 2 + 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229920.peg.910 CDS AZTX01000113.1 3407 2484 -2 - 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229920.peg.911 CDS AZTX01000113.1 4542 3400 -3 - 1143 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229920.peg.912 CDS AZTX01000113.1 4576 4749 1 + 174 hypothetical protein - none -
fig|6666666.229920.peg.913 CDS AZTX01000113.1 5830 4751 -1 - 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229920.peg.914 CDS AZTX01000113.1 7058 5895 -2 - 1164 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229920.peg.915 CDS AZTX01000113.1 7870 7175 -1 - 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229920.peg.916 CDS AZTX01000113.1 7977 8198 3 + 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229920.peg.917 CDS AZTX01000113.1 9341 8265 -2 - 1077 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229920.peg.918 CDS AZTX01000113.1 9527 10894 2 + 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.919 CDS AZTX01000113.1 11011 11286 1 + 276 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.920 CDS AZTX01000113.1 11303 11599 2 + 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.921 CDS AZTX01000113.1 12418 11657 -1 - 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229920.peg.922 CDS AZTX01000113.1 12517 13800 1 + 1284 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) KDO2-Lipid A biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229920.peg.923 CDS AZTX01000113.1 13801 14295 1 + 495 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229920.peg.924 CDS AZTX01000113.1 15069 14344 -3 - 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229920.peg.925 CDS AZTX01000113.1 15158 16201 2 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229920.peg.926 CDS AZTX01000113.1 16639 16298 -1 - 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229920.peg.927 CDS AZTX01000114.1 9 905 3 + 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229920.peg.928 CDS AZTX01000114.1 928 2274 1 + 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) - none -
fig|6666666.229920.peg.929 CDS AZTX01000114.1 2972 2331 -2 - 642 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229920.peg.930 CDS AZTX01000114.1 4491 3034 -3 - 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.931 CDS AZTX01000114.1 5413 4505 -1 - 909 Putative surface protein - none -
fig|6666666.229920.peg.932 CDS AZTX01000114.1 5545 6222 1 + 678 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229920.peg.933 CDS AZTX01000114.1 6267 6443 3 + 177 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229920.peg.934 CDS AZTX01000114.1 6440 7129 2 + 690 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229920.peg.935 CDS AZTX01000114.1 7213 7536 1 + 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229920.peg.936 CDS AZTX01000114.1 7653 9194 3 + 1542 Esterase/lipase - none -
fig|6666666.229920.peg.937 CDS AZTX01000114.1 10822 9449 -1 - 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229920.peg.938 CDS AZTX01000114.1 12833 10899 -2 - 1935 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) Multidrug Resistance Efflux Pumps
fig|6666666.229920.peg.939 CDS AZTX01000114.1 14037 12853 -3 - 1185 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229920.peg.940 CDS AZTX01000115.1 1651 137 -1 - 1515 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229920.peg.941 CDS AZTX01000115.1 2266 1664 -1 - 603 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229920.peg.942 CDS AZTX01000115.1 2824 2354 -1 - 471 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229920.peg.943 CDS AZTX01000116.1 263 1723 2 + 1461 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229920.peg.944 CDS AZTX01000116.1 1738 2874 1 + 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229920.peg.945 CDS AZTX01000116.1 3392 3796 2 + 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229920.peg.946 CDS AZTX01000116.1 3826 4515 1 + 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229920.peg.947 CDS AZTX01000116.1 4601 5023 2 + 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229920.peg.948 CDS AZTX01000116.1 5040 6188 3 + 1149 TolA protein Ton and Tol transport systems
fig|6666666.229920.peg.949 CDS AZTX01000116.1 6223 7503 1 + 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229920.peg.950 CDS AZTX01000116.1 7518 7985 3 + 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229920.peg.951 CDS AZTX01000117.1 183 1250 3 + 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229920.peg.952 CDS AZTX01000117.1 1424 2200 2 + 777 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229920.peg.953 CDS AZTX01000117.1 2201 3079 2 + 879 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229920.peg.954 CDS AZTX01000117.1 3082 3624 1 + 543 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229920.peg.955 CDS AZTX01000117.1 4668 3928 -3 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229920.peg.956 CDS AZTX01000117.1 5596 4943 -1 - 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229920.peg.957 CDS AZTX01000117.1 5679 6413 3 + 735 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229920.peg.958 CDS AZTX01000117.1 6464 7378 2 + 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229920.peg.959 CDS AZTX01000117.1 7671 7435 -3 - 237 Putative lipoprotein yceB precursor - none -
fig|6666666.229920.peg.960 CDS AZTX01000117.1 8020 7694 -1 - 327 Putative lipoprotein yceB precursor - none -
fig|6666666.229920.peg.961 CDS AZTX01000117.1 8222 8743 2 + 522 unknown - none -
fig|6666666.229920.peg.962 CDS AZTX01000117.1 8764 9549 1 + 786 serine/threonine protein kinase - none -
fig|6666666.229920.peg.963 CDS AZTX01000118.1 2278 461 -1 - 1818 ABC transporter ATP-binding protein - none -
fig|6666666.229920.peg.964 CDS AZTX01000118.1 2402 4060 2 + 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229920.peg.965 CDS AZTX01000118.1 4072 4185 1 + 114 hypothetical protein - none -
fig|6666666.229920.peg.966 CDS AZTX01000118.1 4217 4930 2 + 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229920.peg.967 CDS AZTX01000118.1 4998 5141 3 + 144 hypothetical protein - none -
fig|6666666.229920.peg.968 CDS AZTX01000118.1 5155 5712 1 + 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229920.peg.969 CDS AZTX01000118.1 5741 7024 2 + 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229920.peg.970 CDS AZTX01000118.1 7046 7765 2 + 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229920.peg.971 CDS AZTX01000118.1 7780 8649 1 + 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.972 CDS AZTX01000118.1 8658 9992 3 + 1335 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage CBSS-83331.1.peg.3039;
Periplasmic Stress Response
fig|6666666.229920.peg.973 CDS AZTX01000118.1 10011 12422 3 + 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229920.peg.974 CDS AZTX01000118.1 12527 13102 2 + 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229920.peg.975 CDS AZTX01000118.1 13102 14124 1 + 1023 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229920.peg.976 CDS AZTX01000118.1 14261 14671 2 + 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229920.peg.977 CDS AZTX01000118.1 14692 15480 1 + 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229920.peg.978 CDS AZTX01000118.1 15565 16749 1 + 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229920.peg.979 CDS AZTX01000118.1 16742 17341 2 + 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229920.peg.980 CDS AZTX01000118.1 17381 19249 2 + 1869 Putative transport protein - none -
fig|6666666.229920.peg.981 CDS AZTX01000118.1 19260 19868 3 + 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.982 CDS AZTX01000118.1 19879 20511 1 + 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.983 CDS AZTX01000118.1 20511 21440 3 + 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.984 CDS AZTX01000118.1 21530 22111 2 + 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229920.peg.985 CDS AZTX01000119.1 398 1213 2 + 816 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229920.peg.986 CDS AZTX01000119.1 1213 1356 1 + 144 hypothetical protein - none -
fig|6666666.229920.peg.987 CDS AZTX01000119.1 1340 2374 2 + 1035 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229920.peg.988 CDS AZTX01000119.1 2371 5088 1 + 2718 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229920.peg.989 CDS AZTX01000120.1 126 905 3 + 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229920.peg.990 CDS AZTX01000120.1 1072 2469 1 + 1398 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229920.peg.991 CDS AZTX01000120.1 3132 2536 -3 - 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229920.peg.992 CDS AZTX01000120.1 4169 3141 -2 - 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229920.peg.993 CDS AZTX01000120.1 5302 4178 -1 - 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229920.peg.994 CDS AZTX01000120.1 5754 5302 -3 - 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229920.peg.995 CDS AZTX01000120.1 6932 5871 -2 - 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229920.peg.996 CDS AZTX01000120.1 7857 6952 -3 - 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229920.peg.997 CDS AZTX01000121.1 142 1095 1 + 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229920.peg.998 CDS AZTX01000121.1 1114 3225 1 + 2112 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229920.peg.999 CDS AZTX01000121.1 3683 3294 -2 - 390 Endoribonuclease L-PSP - none -
fig|6666666.229920.peg.1000 CDS AZTX01000121.1 4214 3756 -2 - 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229920.peg.1001 CDS AZTX01000121.1 5354 4296 -2 - 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229920.peg.1002 CDS AZTX01000121.1 7427 5502 -2 - 1926 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229920.peg.1003 CDS AZTX01000121.1 7508 8125 2 + 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229920.peg.1004 CDS AZTX01000121.1 8312 10963 2 + 2652 Putative uncharacterized protein ydbH - none -
fig|6666666.229920.peg.1005 CDS AZTX01000121.1 10960 11187 1 + 228 FIG00354920: hypothetical protein - none -
fig|6666666.229920.peg.1006 CDS AZTX01000121.1 11987 12385 2 + 399 Integrase - none -
fig|6666666.229920.peg.1007 CDS AZTX01000122.1 1422 160 -3 - 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis;
YrdC-YciO-Sua5 protein family
fig|6666666.229920.peg.1008 CDS AZTX01000122.1 2099 1557 -2 - 543 hypothetical protein - none -
fig|6666666.229920.peg.1009 CDS AZTX01000122.1 2476 2336 -1 - 141 hypothetical protein - none -
fig|6666666.229920.peg.1010 CDS AZTX01000122.1 2628 2479 -3 - 150 hypothetical protein - none -
fig|6666666.229920.peg.1011 CDS AZTX01000122.1 3719 2715 -2 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229920.peg.1012 CDS AZTX01000122.1 3775 4224 1 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229920.peg.1013 CDS AZTX01000122.1 4234 4677 1 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229920.peg.1014 CDS AZTX01000122.1 8068 4679 -1 - 3390 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229920.peg.1015 CDS AZTX01000122.1 8416 8114 -1 - 303 FIG00696353: hypothetical protein - none -
fig|6666666.229920.peg.1016 CDS AZTX01000122.1 9086 8391 -2 - 696 FIG00696574: hypothetical protein - none -
fig|6666666.229920.peg.1017 CDS AZTX01000122.1 9799 9083 -1 - 717 Type II secretory pathway, component PulJ - none -
fig|6666666.229920.peg.1018 CDS AZTX01000122.1 10430 9813 -2 - 618 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229920.peg.1019 CDS AZTX01000123.1 37 1386 1 + 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229920.peg.1020 CDS AZTX01000123.1 1559 3733 2 + 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229920.peg.1021 CDS AZTX01000123.1 4692 3865 -3 - 828 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229920.peg.1022 CDS AZTX01000123.1 4896 4735 -3 - 162 hypothetical protein - none -
fig|6666666.229920.peg.1023 CDS AZTX01000123.1 5612 4869 -2 - 744 Probable transmembrane protein - none -
fig|6666666.229920.peg.1024 CDS AZTX01000123.1 5879 5625 -2 - 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.1025 CDS AZTX01000123.1 6127 5876 -1 - 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.1026 CDS AZTX01000123.1 7192 6236 -1 - 957 Polysaccharide polymerization protein - none -
fig|6666666.229920.peg.1027 CDS AZTX01000123.1 8652 7189 -3 - 1464 putative flippase - none -
fig|6666666.229920.peg.1028 CDS AZTX01000124.1 219 1172 3 + 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229920.peg.1029 CDS AZTX01000124.1 1235 2092 2 + 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229920.peg.1030 CDS AZTX01000124.1 2124 3470 3 + 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229920.peg.1031 CDS AZTX01000124.1 4829 3498 -2 - 1332 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229920.peg.1032 CDS AZTX01000124.1 5340 4954 -3 - 387 Integral membrane protein - none -
fig|6666666.229920.peg.1033 CDS AZTX01000124.1 5534 6550 2 + 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229920.peg.1034 CDS AZTX01000124.1 6556 6897 1 + 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229920.peg.1035 CDS AZTX01000124.1 6904 8193 1 + 1290 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229920.peg.1036 CDS AZTX01000124.1 8326 8970 1 + 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229920.peg.1037 CDS AZTX01000124.1 9057 9170 3 + 114 hypothetical protein - none -
fig|6666666.229920.peg.1038 CDS AZTX01000124.1 10791 9418 -3 - 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229920.peg.1039 CDS AZTX01000124.1 11948 10794 -2 - 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229920.peg.1040 CDS AZTX01000125.1 1840 86 -1 - 1755 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229920.peg.1041 CDS AZTX01000125.1 1843 2382 1 + 540 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229920.peg.1042 CDS AZTX01000125.1 2387 2938 2 + 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229920.peg.1043 CDS AZTX01000125.1 2942 3742 2 + 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229920.peg.1044 CDS AZTX01000125.1 4618 3737 -1 - 882 Protein rarD - none -
fig|6666666.229920.peg.1045 CDS AZTX01000125.1 4836 4651 -3 - 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229920.peg.1046 CDS AZTX01000126.1 49 1452 1 + 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.229920.peg.1047 CDS AZTX01000126.1 2076 1615 -3 - 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229920.peg.1048 CDS AZTX01000126.1 2729 2088 -2 - 642 Stringent starvation protein A Carbon Starvation
fig|6666666.229920.peg.1049 CDS AZTX01000126.1 3384 2929 -3 - 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229920.peg.1050 CDS AZTX01000126.1 3630 3385 -3 - 246 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229920.peg.1051 CDS AZTX01000126.1 4112 3630 -2 - 483 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229920.peg.1052 CDS AZTX01000126.1 4989 4165 -3 - 825 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229920.peg.1053 CDS AZTX01000127.1 776 895 2 + 120 hypothetical protein - none -
fig|6666666.229920.peg.1054 CDS AZTX01000127.1 1108 866 -1 - 243 DNA-damage-inducible protein d - none -
fig|6666666.229920.peg.1055 CDS AZTX01000127.1 2713 1289 -1 - 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229920.peg.1056 CDS AZTX01000127.1 4214 2724 -2 - 1491 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229920.peg.1057 CDS AZTX01000128.1 1044 154 -3 - 891 hypothetical protein - none -
fig|6666666.229920.peg.1058 CDS AZTX01000128.1 2747 1047 -2 - 1701 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229920.peg.1059 CDS AZTX01000130.1 301 62 -1 - 240 hypothetical protein - none -
fig|6666666.229920.peg.1060 CDS AZTX01000131.1 85 1575 1 + 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229920.peg.1061 CDS AZTX01000131.1 2781 1720 -3 - 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229920.peg.1062 CDS AZTX01000131.1 2920 2768 -1 - 153 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229920.peg.1063 CDS AZTX01000131.1 3495 2923 -3 - 573 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229920.peg.1064 CDS AZTX01000131.1 4338 3574 -3 - 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229920.peg.1065 CDS AZTX01000132.1 124 3177 1 + 3054 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229920.peg.1066 CDS AZTX01000132.1 3187 3609 1 + 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229920.peg.1067 CDS AZTX01000132.1 3602 4666 2 + 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229920.peg.1068 CDS AZTX01000132.1 4707 5207 3 + 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229920.peg.1069 CDS AZTX01000132.1 5312 5199 -2 - 114 hypothetical protein - none -
fig|6666666.229920.peg.1070 CDS AZTX01000132.1 6557 5412 -2 - 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229920.peg.1071 CDS AZTX01000132.1 7416 6613 -3 - 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229920.peg.1072 CDS AZTX01000132.1 8449 7571 -1 - 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229920.peg.1073 CDS AZTX01000132.1 9328 8459 -1 - 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229920.peg.1074 CDS AZTX01000132.1 10225 9338 -1 - 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229920.peg.1075 CDS AZTX01000132.1 10940 10239 -2 - 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229920.peg.1076 CDS AZTX01000132.1 11182 12168 1 + 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229920.peg.1077 CDS AZTX01000132.1 12232 14082 1 + 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229920.peg.1078 CDS AZTX01000132.1 14220 15350 3 + 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229920.peg.1079 CDS AZTX01000133.1 1181 6 -2 - 1176 hypothetical protein - none -
fig|6666666.229920.peg.1080 CDS AZTX01000133.1 3317 1185 -2 - 2133 hypothetical protein - none -
fig|6666666.229920.peg.1081 CDS AZTX01000133.1 4470 4141 -3 - 330 hypothetical protein - none -
fig|6666666.229920.peg.1082 CDS AZTX01000134.1 893 75 -2 - 819 Peptide transport system ATP-binding protein SapF Peptide ABC transport system Sap
fig|6666666.229920.peg.1083 CDS AZTX01000134.1 1949 897 -2 - 1053 Peptide transport system ATP-binding protein SapD Peptide ABC transport system Sap
fig|6666666.229920.peg.1084 CDS AZTX01000134.1 2844 1957 -3 - 888 Peptide transport system permease protein SapC Peptide ABC transport system Sap
fig|6666666.229920.peg.1085 CDS AZTX01000134.1 3799 2834 -1 - 966 Peptide transport system permease protein SapB Peptide ABC transport system Sap
fig|6666666.229920.peg.1086 CDS AZTX01000134.1 5430 3799 -3 - 1632 Peptide transport periplasmic protein SapA Peptide ABC transport system Sap
fig|6666666.229920.peg.1087 CDS AZTX01000134.1 5696 7111 2 + 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229920.peg.1088 CDS AZTX01000134.1 7124 8203 2 + 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229920.peg.1089 CDS AZTX01000134.1 8287 9246 1 + 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229920.peg.1090 CDS AZTX01000134.1 9376 9260 -1 - 117 hypothetical protein - none -
fig|6666666.229920.peg.1091 CDS AZTX01000134.1 9551 9664 2 + 114 hypothetical protein - none -
fig|6666666.229920.peg.1092 CDS AZTX01000134.1 9920 9624 -2 - 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229920.peg.1093 CDS AZTX01000134.1 10984 10040 -1 - 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229920.peg.1094 CDS AZTX01000134.1 12429 10999 -3 - 1431 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229920.peg.1095 CDS AZTX01000134.1 12850 12413 -1 - 438 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229920.peg.1096 CDS AZTX01000134.1 14337 12850 -3 - 1488 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229920.peg.1097 CDS AZTX01000134.1 14828 14334 -2 - 495 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229920.peg.1098 CDS AZTX01000134.1 14803 14931 1 + 129 hypothetical protein - none -
fig|6666666.229920.peg.1099 CDS AZTX01000136.1 1452 307 -3 - 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229920.peg.1100 CDS AZTX01000136.1 1899 1753 -3 - 147 hypothetical protein - none -
fig|6666666.229920.peg.1101 CDS AZTX01000136.1 3026 2076 -2 - 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229920.peg.1102 CDS AZTX01000136.1 3978 3067 -3 - 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229920.peg.1103 CDS AZTX01000136.1 4601 3975 -2 - 627 Outer membrane lipoprotein LolB A Gammaproteobacteria Cluster Relating to Translation;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229920.peg.1104 CDS AZTX01000136.1 5940 4663 -3 - 1278 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229920.peg.1105 CDS AZTX01000136.1 6551 5940 -2 - 612 SH3 domain protein - none -
fig|6666666.229920.peg.1106 CDS AZTX01000136.1 7885 6620 -1 - 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229920.peg.1107 CDS AZTX01000136.1 8591 7911 -2 - 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229920.peg.1108 CDS AZTX01000137.1 920 159 -2 - 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229920.peg.1109 CDS AZTX01000137.1 988 1455 1 + 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229920.peg.1110 CDS AZTX01000137.1 2874 1543 -3 - 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229920.peg.1111 CDS AZTX01000137.1 4045 2885 -1 - 1161 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229920.peg.1112 CDS AZTX01000137.1 5031 4057 -3 - 975 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229920.peg.1113 CDS AZTX01000138.1 723 313 -3 - 411 excinuclease ABC subunit A - none -
fig|6666666.229920.peg.1114 CDS AZTX01000138.1 1475 735 -2 - 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229920.peg.1115 CDS AZTX01000138.1 1880 1509 -2 - 372 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) - none -
fig|6666666.229920.peg.1116 CDS AZTX01000138.1 3329 2061 -2 - 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229920.peg.1117 CDS AZTX01000139.1 1287 352 -3 - 936 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229920.peg.1118 CDS AZTX01000140.1 81 2312 3 + 2232 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229920.peg.1119 CDS AZTX01000140.1 2397 3299 3 + 903 Lipoprotein nlpI precursor - none -
fig|6666666.229920.peg.1120 CDS AZTX01000140.1 3426 5213 3 + 1788 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229920.peg.1121 CDS AZTX01000140.1 5907 5296 -3 - 612 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229920.peg.1122 CDS AZTX01000141.1 1805 51 -2 - 1755 Putative sulfate permease - none -
fig|6666666.229920.peg.1123 CDS AZTX01000141.1 2242 4659 1 + 2418 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229920.peg.1124 CDS AZTX01000141.1 4786 6633 1 + 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229920.peg.1125 CDS AZTX01000141.1 6768 7394 3 + 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229920.peg.1126 CDS AZTX01000141.1 7518 8771 3 + 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229920.peg.1127 CDS AZTX01000141.1 8905 8768 -1 - 138 hypothetical protein - none -
fig|6666666.229920.peg.1128 CDS AZTX01000141.1 8891 9595 2 + 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229920.peg.1129 CDS AZTX01000141.1 10053 9601 -3 - 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229920.peg.1130 CDS AZTX01000141.1 10720 10106 -1 - 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229920.peg.1131 CDS AZTX01000141.1 12008 10731 -2 - 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229920.peg.1132 CDS AZTX01000141.1 13133 12030 -2 - 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229920.peg.1133 CDS AZTX01000141.1 14200 13145 -1 - 1056 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229920.peg.1134 CDS AZTX01000141.1 14894 14343 -2 - 552 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229920.peg.1135 CDS AZTX01000141.1 16055 14916 -2 - 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229920.peg.1136 CDS AZTX01000141.1 16182 16295 3 + 114 hypothetical protein - none -
fig|6666666.229920.peg.1137 CDS AZTX01000141.1 16349 17398 2 + 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229920.peg.1138 CDS AZTX01000141.1 18864 17500 -3 - 1365 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229920.peg.1139 CDS AZTX01000141.1 20198 18957 -2 - 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229920.peg.1140 CDS AZTX01000141.1 20855 20355 -2 - 501 Protein sprT - none -
fig|6666666.229920.peg.1141 CDS AZTX01000142.1 72 815 3 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.1142 CDS AZTX01000142.1 823 2235 1 + 1413 Putative cell division protein precursor - none -
fig|6666666.229920.peg.1143 CDS AZTX01000142.1 3171 2308 -3 - 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229920.peg.1144 CDS AZTX01000142.1 4053 3313 -3 - 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229920.peg.1145 CDS AZTX01000142.1 6511 4199 -1 - 2313 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229920.peg.1146 CDS AZTX01000142.1 7173 6610 -3 - 564 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229920.peg.1147 CDS AZTX01000143.1 1923 70 -3 - 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229920.peg.1148 CDS AZTX01000144.1 18 659 3 + 642 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229920.peg.1149 CDS AZTX01000144.1 672 2393 3 + 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229920.peg.1150 CDS AZTX01000144.1 2426 3073 2 + 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229920.peg.1151 CDS AZTX01000144.1 3090 3782 3 + 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229920.peg.1152 CDS AZTX01000144.1 3961 4656 1 + 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229920.peg.1153 CDS AZTX01000144.1 4663 5166 1 + 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229920.peg.1154 CDS AZTX01000144.1 5166 5819 3 + 654 Substrate-specific component NikM of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229920.peg.1155 CDS AZTX01000144.1 5816 6481 2 + 666 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229920.peg.1156 CDS AZTX01000144.1 6478 7101 1 + 624 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229920.peg.1157 CDS AZTX01000144.1 7180 7989 1 + 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229920.peg.1158 CDS AZTX01000144.1 8016 9128 3 + 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229920.peg.1159 CDS AZTX01000144.1 9128 10141 2 + 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229920.peg.1160 CDS AZTX01000145.1 62 358 2 + 297 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229920.peg.1161 CDS AZTX01000145.1 1304 447 -2 - 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.229920.peg.1162 CDS AZTX01000146.1 367 170 -1 - 198 hypothetical protein - none -
fig|6666666.229920.peg.1163 CDS AZTX01000146.1 1683 379 -3 - 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229920.peg.1164 CDS AZTX01000146.1 3490 1694 -1 - 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229920.peg.1165 CDS AZTX01000146.1 3772 3506 -1 - 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229920.peg.1166 CDS AZTX01000147.1 1115 819 -2 - 297 Inner membrane protein yciS - none -
fig|6666666.229920.peg.1167 CDS AZTX01000147.1 1501 1214 -1 - 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229920.peg.1168 CDS AZTX01000147.1 3209 1563 -2 - 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229920.peg.1169 CDS AZTX01000147.1 3984 3307 -3 - 678 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229920.peg.1170 CDS AZTX01000147.1 4870 3977 -1 - 894 Membrane protein LAPB - none -
fig|6666666.229920.peg.1171 CDS AZTX01000148.1 131 2077 2 + 1947 Epi-inositol hydrolase (EC 3.7.1.-) Inositol catabolism
fig|6666666.229920.peg.1172 CDS AZTX01000148.1 2132 3028 2 + 897 Inosose dehydratase (EC 4.2.1.44) Inositol catabolism
fig|6666666.229920.peg.1173 CDS AZTX01000148.1 3031 4041 1 + 1011 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229920.peg.1174 CDS AZTX01000148.1 4657 4145 -1 - 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229920.peg.1175 CDS AZTX01000148.1 5883 4735 -3 - 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229920.peg.1176 CDS AZTX01000148.1 7841 5961 -2 - 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229920.peg.1177 CDS AZTX01000149.1 2233 131 -1 - 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229920.peg.1178 CDS AZTX01000149.1 2818 2348 -1 - 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229920.peg.1179 CDS AZTX01000149.1 3345 2971 -3 - 375 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229920.peg.1180 CDS AZTX01000149.1 3866 3567 -2 - 300 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229920.peg.1181 CDS AZTX01000150.1 1276 122 -1 - 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229920.peg.1182 CDS AZTX01000150.1 1753 1484 -1 - 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229920.peg.1183 CDS AZTX01000150.1 2598 1849 -3 - 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229920.peg.1184 CDS AZTX01000150.1 4357 2651 -1 - 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229920.peg.1185 CDS AZTX01000150.1 5652 4348 -3 - 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229920.peg.1186 CDS AZTX01000150.1 5769 6983 3 + 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229920.peg.1187 CDS AZTX01000150.1 7835 7104 -2 - 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229920.peg.1188 CDS AZTX01000151.1 11 463 2 + 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229920.peg.1189 CDS AZTX01000151.1 498 1256 3 + 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229920.peg.1190 CDS AZTX01000151.1 2452 1391 -1 - 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229920.peg.1191 CDS AZTX01000151.1 2526 2876 3 + 351 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229920.peg.1192 CDS AZTX01000151.1 3067 2942 -1 - 126 hypothetical protein - none -
fig|6666666.229920.peg.1193 CDS AZTX01000151.1 3422 3060 -2 - 363 FIG00696564: hypothetical protein - none -
fig|6666666.229920.peg.1194 CDS AZTX01000151.1 3657 3373 -3 - 285 hypothetical protein - none -
fig|6666666.229920.peg.1195 CDS AZTX01000151.1 3868 5199 1 + 1332 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229920.peg.1196 CDS AZTX01000151.1 5324 5728 2 + 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229920.peg.1197 CDS AZTX01000151.1 6741 6145 -3 - 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229920.peg.1198 CDS AZTX01000151.1 7555 6836 -1 - 720 probable periplasmic protein NMA1059 - none -
fig|6666666.229920.peg.1199 CDS AZTX01000152.1 1474 128 -1 - 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229920.peg.1200 CDS AZTX01000152.1 1985 1518 -2 - 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229920.peg.1201 CDS AZTX01000152.1 2002 2154 1 + 153 hypothetical protein - none -
fig|6666666.229920.peg.1202 CDS AZTX01000152.1 2585 2109 -2 - 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229920.peg.1203 CDS AZTX01000152.1 3685 2684 -1 - 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229920.peg.1204 CDS AZTX01000152.1 3995 3666 -2 - 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229920.peg.1205 CDS AZTX01000152.1 4396 3977 -1 - 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229920.peg.1206 CDS AZTX01000152.1 5293 4436 -1 - 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229920.peg.1207 CDS AZTX01000152.1 6172 5405 -1 - 768 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229920.peg.1208 CDS AZTX01000153.1 130 282 1 + 153 hypothetical protein - none -
fig|6666666.229920.peg.1209 CDS AZTX01000153.1 2289 1111 -3 - 1179 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229920.peg.1210 CDS AZTX01000153.1 3700 2396 -1 - 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229920.peg.1211 CDS AZTX01000153.1 4587 3886 -3 - 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229920.peg.1212 CDS AZTX01000153.1 4608 5306 3 + 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229920.peg.1213 CDS AZTX01000153.1 5915 5364 -2 - 552 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229920.peg.1214 CDS AZTX01000153.1 6856 5867 -1 - 990 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229920.peg.1215 CDS AZTX01000154.1 59 817 2 + 759 Galactitol utilization operon repressor - none -
fig|6666666.229920.peg.1216 CDS AZTX01000154.1 2787 937 -3 - 1851 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229920.peg.1217 CDS AZTX01000154.1 3762 2872 -3 - 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229920.peg.1218 CDS AZTX01000154.1 4018 3773 -1 - 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229920.peg.1219 CDS AZTX01000155.1 32 856 2 + 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229920.peg.1220 CDS AZTX01000155.1 1532 921 -2 - 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229920.peg.1221 CDS AZTX01000155.1 4071 1816 -3 - 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229920.peg.1222 CDS AZTX01000155.1 4065 4178 3 + 114 hypothetical protein - none -
fig|6666666.229920.peg.1223 CDS AZTX01000156.1 1028 93 -2 - 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229920.peg.1224 CDS AZTX01000156.1 1600 1037 -1 - 564 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229920.peg.1225 CDS AZTX01000156.1 3102 1726 -3 - 1377 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229920.peg.1226 CDS AZTX01000156.1 3190 3774 1 + 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229920.peg.1227 CDS AZTX01000156.1 4073 5038 2 + 966 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229920.peg.1228 CDS AZTX01000156.1 5056 5853 1 + 798 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229920.peg.1229 CDS AZTX01000156.1 5867 6703 2 + 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229920.peg.1230 CDS AZTX01000156.1 6813 7988 3 + 1176 Cof protein - none -
fig|6666666.229920.peg.1231 CDS AZTX01000156.1 8279 9529 2 + 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229920.peg.1232 CDS AZTX01000156.1 9655 10374 1 + 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229920.peg.1233 CDS AZTX01000157.1 645 22 -3 - 624 hypothetical protein - none -
fig|6666666.229920.peg.1234 CDS AZTX01000158.1 1082 411 -2 - 672 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229920.peg.1235 CDS AZTX01000158.1 3004 1043 -1 - 1962 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229920.peg.1236 CDS AZTX01000159.1 1644 190 -3 - 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229920.peg.1237 CDS AZTX01000159.1 1665 1811 3 + 147 hypothetical protein - none -
fig|6666666.229920.peg.1238 CDS AZTX01000159.1 2658 2200 -3 - 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229920.peg.1239 CDS AZTX01000159.1 3369 2671 -3 - 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229920.peg.1240 CDS AZTX01000159.1 5181 3622 -3 - 1560 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229920.peg.1241 CDS AZTX01000159.1 6013 5204 -1 - 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229920.peg.1242 CDS AZTX01000159.1 6479 6051 -2 - 429 hypothetical protein - none -
fig|6666666.229920.peg.1243 CDS AZTX01000159.1 8547 6541 -3 - 2007 oligopeptide transporter - none -
fig|6666666.229920.peg.1244 CDS AZTX01000160.1 63 905 3 + 843 FIG00782214: hypothetical protein - none -
fig|6666666.229920.peg.1245 CDS AZTX01000160.1 923 1615 2 + 693 Metal-dependent hydrolase - none -
fig|6666666.229920.peg.1246 CDS AZTX01000160.1 1804 3459 1 + 1656 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229920.peg.1247 CDS AZTX01000160.1 3653 4471 2 + 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229920.peg.1248 CDS AZTX01000160.1 7277 4677 -2 - 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229920.peg.1249 CDS AZTX01000161.1 1081 782 -1 - 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229920.peg.1250 CDS AZTX01000161.1 2124 1075 -3 - 1050 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229920.peg.1251 CDS AZTX01000161.1 3253 2369 -1 - 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229920.peg.1252 CDS AZTX01000161.1 3808 3266 -1 - 543 Protein involved in cell division - none -
fig|6666666.229920.peg.1253 CDS AZTX01000161.1 5263 3827 -1 - 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229920.peg.1254 CDS AZTX01000161.1 5532 5260 -3 - 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229920.peg.1255 CDS AZTX01000161.1 6905 5556 -2 - 1350 FOG: TPR repeat - none -
fig|6666666.229920.peg.1256 CDS AZTX01000161.1 7794 7063 -3 - 732 Periplasmic protein TonB, links inner and outer membranes - none -
fig|6666666.229920.peg.1257 CDS AZTX01000162.1 122 970 2 + 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229920.peg.1258 CDS AZTX01000162.1 1273 1037 -1 - 237 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229920.peg.1259 CDS AZTX01000163.1 137 574 2 + 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229920.peg.1260 CDS AZTX01000163.1 691 2157 1 + 1467 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229920.peg.1261 CDS AZTX01000163.1 2150 2650 2 + 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate biosynthesis cluster
fig|6666666.229920.peg.1262 CDS AZTX01000163.1 3083 2721 -2 - 363 hypothetical protein - none -
fig|6666666.229920.peg.1263 CDS AZTX01000163.1 5565 3430 -3 - 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229920.peg.1264 CDS AZTX01000163.1 6837 5635 -3 - 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229920.peg.1265 CDS AZTX01000163.1 7105 7548 1 + 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229920.peg.1266 CDS AZTX01000163.1 7727 8269 2 + 543 Colicin V production protein - none -
fig|6666666.229920.peg.1267 CDS AZTX01000163.1 8391 8266 -3 - 126 hypothetical protein - none -
fig|6666666.229920.peg.1268 CDS AZTX01000163.1 10488 8413 -3 - 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229920.peg.1269 CDS AZTX01000163.1 12981 10591 -3 - 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229920.peg.1270 CDS AZTX01000163.1 13150 15864 1 + 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229920.peg.1271 CDS AZTX01000163.1 16892 16017 -2 - 876 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229920.peg.1272 CDS AZTX01000164.1 3072 2593 -3 - 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229920.peg.1273 CDS AZTX01000164.1 3186 3359 3 + 174 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229920.peg.1274 CDS AZTX01000164.1 4792 3788 -1 - 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229920.peg.1275 CDS AZTX01000164.1 5485 4838 -1 - 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229920.peg.1276 CDS AZTX01000164.1 7097 5469 -2 - 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229920.peg.1277 CDS AZTX01000164.1 8110 7106 -1 - 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229920.peg.1278 CDS AZTX01000164.1 8512 8132 -1 - 381 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229920.peg.1279 CDS AZTX01000165.1 54 1376 3 + 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229920.peg.1280 CDS AZTX01000165.1 1546 3294 1 + 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229920.peg.1281 CDS AZTX01000165.1 3311 4945 2 + 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229920.peg.1282 CDS AZTX01000165.1 5677 5057 -1 - 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229920.peg.1283 CDS AZTX01000165.1 6588 5689 -3 - 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229920.peg.1284 CDS AZTX01000165.1 6747 7475 3 + 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229920.peg.1285 CDS AZTX01000165.1 7751 7536 -2 - 216 Protein SlyX - none -
fig|6666666.229920.peg.1286 CDS AZTX01000165.1 7846 8571 1 + 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229920.peg.1287 CDS AZTX01000165.1 8651 9319 2 + 669 YheO-like PAS domain - none -
fig|6666666.229920.peg.1288 CDS AZTX01000165.1 9323 9700 2 + 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229920.peg.1289 CDS AZTX01000165.1 9697 10059 1 + 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229920.peg.1290 CDS AZTX01000165.1 10059 10349 3 + 291 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229920.peg.1291 CDS AZTX01000165.1 11121 10354 -3 - 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229920.peg.1292 CDS AZTX01000165.1 11814 11131 -3 - 684 L-Cystine ABC transporter, permease protein TcyB - none -
fig|6666666.229920.peg.1293 CDS AZTX01000165.1 12616 11837 -1 - 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229920.peg.1294 CDS AZTX01000166.1 481 1104 1 + 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229920.peg.1295 CDS AZTX01000166.1 1094 1306 2 + 213 FIG003276: zinc-binding protein - none -
fig|6666666.229920.peg.1296 CDS AZTX01000166.1 1306 1578 1 + 273 FIG00904058: hypothetical protein - none -
fig|6666666.229920.peg.1297 CDS AZTX01000166.1 1975 3348 1 + 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229920.peg.1298 CDS AZTX01000167.1 63 680 3 + 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229920.peg.1299 CDS AZTX01000167.1 740 1069 2 + 330 Protein yifE - none -
fig|6666666.229920.peg.1300 CDS AZTX01000167.1 1139 2236 2 + 1098 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) RNA methylation;
tRNA modification Bacteria
fig|6666666.229920.peg.1301 CDS AZTX01000167.1 2238 2996 3 + 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229920.peg.1302 CDS AZTX01000167.1 3088 3423 1 + 336 hypothetical protein - none -
fig|6666666.229920.peg.1303 CDS AZTX01000167.1 3478 4851 1 + 1374 hypothetical protein - none -
fig|6666666.229920.peg.1304 CDS AZTX01000168.1 410 1771 2 + 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229920.peg.1305 CDS AZTX01000168.1 1782 2882 3 + 1101 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229920.peg.1306 CDS AZTX01000168.1 2886 3962 3 + 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229920.peg.1307 CDS AZTX01000168.1 4764 4009 -3 - 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229920.peg.1308 CDS AZTX01000169.1 204 1244 3 + 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229920.peg.1309 CDS AZTX01000170.1 84 2741 3 + 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229920.peg.1310 CDS AZTX01000170.1 2770 4440 1 + 1671 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229920.peg.1311 CDS AZTX01000170.1 4477 5958 1 + 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229920.peg.1312 CDS AZTX01000170.1 6163 6044 -1 - 120 hypothetical protein - none -
fig|6666666.229920.peg.1313 CDS AZTX01000170.1 6942 6388 -3 - 555 FIG002003: Protein YdjA - none -
fig|6666666.229920.peg.1314 CDS AZTX01000170.1 7066 8946 1 + 1881 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229920.peg.1315 CDS AZTX01000170.1 8987 10111 2 + 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229920.peg.1316 CDS AZTX01000170.1 10192 10815 1 + 624 Hypothetical YciO protein, TsaC/YrdC paralog YrdC-YciO-Sua5 protein family
fig|6666666.229920.peg.1317 CDS AZTX01000170.1 10870 11838 1 + 969 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229920.peg.1318 CDS AZTX01000170.1 11869 12840 1 + 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229920.peg.1319 CDS AZTX01000170.1 12925 13752 1 + 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229920.peg.1320 CDS AZTX01000170.1 14187 13867 -3 - 321 putative cytoplasmic protein - none -
fig|6666666.229920.peg.1321 CDS AZTX01000170.1 14354 14220 -2 - 135 hypothetical protein - none -
fig|6666666.229920.peg.1322 CDS AZTX01000170.1 15654 14656 -3 - 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229920.peg.1323 CDS AZTX01000171.1 45 356 3 + 312 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229920.peg.1324 CDS AZTX01000171.1 445 636 1 + 192 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229920.peg.1325 CDS AZTX01000171.1 803 3031 2 + 2229 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229920.peg.1326 CDS AZTX01000171.1 3157 3035 -1 - 123 hypothetical protein - none -
fig|6666666.229920.peg.1327 CDS AZTX01000171.1 3146 4318 2 + 1173 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229920.peg.1328 CDS AZTX01000171.1 5121 4345 -3 - 777 Permeases of the major facilitator superfamily - none -
fig|6666666.229920.peg.1329 CDS AZTX01000171.1 5801 5109 -2 - 693 Permeases of the major facilitator superfamily - none -
fig|6666666.229920.peg.1330 CDS AZTX01000171.1 6086 7084 2 + 999 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229920.peg.1331 CDS AZTX01000171.1 7096 7899 1 + 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229920.peg.1332 CDS AZTX01000171.1 7915 8751 1 + 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229920.peg.1333 CDS AZTX01000171.1 10457 9420 -2 - 1038 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229920.peg.1334 CDS AZTX01000171.1 11909 10638 -2 - 1272 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229920.peg.1335 CDS AZTX01000172.1 3491 615 -2 - 2877 helicase (Snf2/Rad54 family) - none -
fig|6666666.229920.peg.1336 CDS AZTX01000172.1 5415 3628 -3 - 1788 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229920.peg.1337 CDS AZTX01000172.1 5580 5446 -3 - 135 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229920.peg.1338 CDS AZTX01000173.1 1755 289 -3 - 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain Purine conversions;
Purine salvage cluster
fig|6666666.229920.peg.1339 CDS AZTX01000173.1 1897 2829 1 + 933 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229920.peg.1340 CDS AZTX01000173.1 2916 3119 3 + 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229920.peg.1341 CDS AZTX01000174.1 562 41 -1 - 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229920.peg.1342 CDS AZTX01000174.1 627 1658 3 + 1032 Lysyl-lysine 2,3-aminomutase Translation elongation factor P lysylation
fig|6666666.229920.peg.1343 CDS AZTX01000174.1 1830 3152 3 + 1323 Cell envelope opacity-associated protein A - none -
fig|6666666.229920.peg.1344 CDS AZTX01000174.1 3214 3588 1 + 375 opacity associated protein - none -
fig|6666666.229920.peg.1345 CDS AZTX01000174.1 4584 3679 -3 - 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229920.peg.1346 CDS AZTX01000174.1 4647 5087 3 + 441 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229920.peg.1347 CDS AZTX01000174.1 5090 5983 2 + 894 Tyrosine recombinase XerD - none -
fig|6666666.229920.peg.1348 CDS AZTX01000174.1 6147 7445 3 + 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229920.peg.1349 CDS AZTX01000174.1 7593 7468 -3 - 126 hypothetical protein - none -
fig|6666666.229920.peg.1350 CDS AZTX01000174.1 8510 7623 -2 - 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229920.peg.1351 CDS AZTX01000174.1 9763 8510 -1 - 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229920.peg.1352 CDS AZTX01000174.1 10578 9859 -3 - 720 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229920.peg.1353 CDS AZTX01000174.1 11911 10637 -1 - 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229920.peg.1354 CDS AZTX01000174.1 12407 11967 -2 - 441 hypothetical protein - none -
fig|6666666.229920.peg.1355 CDS AZTX01000174.1 13379 12435 -2 - 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229920.peg.1356 CDS AZTX01000174.1 15839 13392 -2 - 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229920.peg.1357 CDS AZTX01000174.1 16059 15928 -3 - 132 hypothetical protein - none -
fig|6666666.229920.peg.1358 CDS AZTX01000174.1 16150 17586 1 + 1437 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229920.peg.1359 CDS AZTX01000174.1 17579 18274 2 + 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229920.peg.1360 CDS AZTX01000174.1 19163 18327 -2 - 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229920.peg.1361 CDS AZTX01000174.1 20989 19478 -1 - 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229920.peg.1362 CDS AZTX01000174.1 22128 21124 -3 - 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229920.peg.1363 CDS AZTX01000174.1 23134 22241 -1 - 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229920.peg.1364 CDS AZTX01000175.1 1524 520 -3 - 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229920.peg.1365 CDS AZTX01000175.1 1695 2405 3 + 711 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229920.peg.1366 CDS AZTX01000175.1 2463 2729 3 + 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229920.peg.1367 CDS AZTX01000175.1 2775 4898 3 + 2124 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229920.peg.1368 CDS AZTX01000175.1 4900 6981 1 + 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229920.peg.1369 CDS AZTX01000175.1 6974 7468 2 + 495 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229920.peg.1370 CDS AZTX01000175.1 7502 8329 2 + 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229920.peg.1371 CDS AZTX01000176.1 336 1628 3 + 1293 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229920.peg.1372 CDS AZTX01000176.1 1650 2543 3 + 894 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229920.peg.1373 CDS AZTX01000177.1 61 417 1 + 357 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229920.peg.1374 CDS AZTX01000177.1 414 1811 3 + 1398 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229920.peg.1375 CDS AZTX01000177.1 1808 2191 2 + 384 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229920.peg.1376 CDS AZTX01000177.1 2204 3070 2 + 867 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229920.peg.1377 CDS AZTX01000178.1 25 249 1 + 225 CRISPR-associated RecB family exonuclease Cas4 - none -
fig|6666666.229920.peg.1378 CDS AZTX01000178.1 315 1019 3 + 705 hypothetical protein - none -
fig|6666666.229920.peg.1379 CDS AZTX01000179.1 1628 297 -2 - 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229920.peg.1380 CDS AZTX01000179.1 1615 1743 1 + 129 hypothetical protein - none -
fig|6666666.229920.peg.1381 CDS AZTX01000179.1 1727 2425 2 + 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229920.peg.1382 CDS AZTX01000179.1 3189 2500 -3 - 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229920.peg.1383 CDS AZTX01000179.1 3570 4229 3 + 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229920.peg.1384 CDS AZTX01000180.1 1847 438 -2 - 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229920.peg.1385 CDS AZTX01000180.1 1917 2429 3 + 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229920.peg.1386 CDS AZTX01000180.1 2523 2678 3 + 156 hypothetical protein - none -
fig|6666666.229920.peg.1387 CDS AZTX01000180.1 2671 2952 1 + 282 hypothetical protein - none -
fig|6666666.229920.peg.1388 CDS AZTX01000181.1 85 840 1 + 756 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229920.peg.1389 CDS AZTX01000181.1 931 1719 1 + 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229920.peg.1390 CDS AZTX01000181.1 1792 3771 1 + 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229920.peg.1391 CDS AZTX01000181.1 4036 3890 -1 - 147 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229920.peg.1392 CDS AZTX01000183.1 4 828 1 + 825 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229920.peg.1393 CDS AZTX01000183.1 877 1875 1 + 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229920.peg.1394 CDS AZTX01000183.1 1826 1948 2 + 123 hypothetical protein - none -
fig|6666666.229920.peg.1395 CDS AZTX01000183.1 2463 1945 -3 - 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229920.peg.1396 CDS AZTX01000185.1 1274 294 -2 - 981 HlyD family secretion protein - none -
fig|6666666.229920.peg.1397 CDS AZTX01000185.1 1422 1985 3 + 564 Transcriptional regulator, TetR family - none -
fig|6666666.229920.peg.1398 CDS AZTX01000185.1 3226 2036 -1 - 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229920.peg.1399 CDS AZTX01000185.1 3648 6257 3 + 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229920.peg.1400 CDS AZTX01000185.1 6330 7349 3 + 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229920.peg.1401 CDS AZTX01000185.1 7363 8199 1 + 837 COG0613, Predicted metal-dependent phosphoesterases (PHP family) YrdC-YciO-Sua5 protein family;
tRNA modification Bacteria
fig|6666666.229920.peg.1402 CDS AZTX01000185.1 8437 11043 1 + 2607 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229920.peg.1403 CDS AZTX01000185.1 11964 11128 -3 - 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229920.peg.1404 CDS AZTX01000185.1 13023 12091 -3 - 933 Universal stress protein E Universal stress protein family
fig|6666666.229920.peg.1405 CDS AZTX01000185.1 13437 13141 -3 - 297 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229920.peg.1406 CDS AZTX01000186.1 94 1062 1 + 969 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229920.peg.1407 CDS AZTX01000187.1 191 985 2 + 795 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229920.peg.1408 CDS AZTX01000187.1 2072 1083 -2 - 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229920.peg.1409 CDS AZTX01000189.1 81 854 3 + 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229920.peg.1410 CDS AZTX01000189.1 866 1669 2 + 804 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229920.peg.1411 CDS AZTX01000189.1 3418 2045 -1 - 1374 sodium-dependent transporter - none -
fig|6666666.229920.peg.1412 CDS AZTX01000189.1 4078 3443 -1 - 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229920.peg.1413 CDS AZTX01000189.1 5010 4225 -3 - 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229920.peg.1414 CDS AZTX01000189.1 5623 5003 -1 - 621 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229920.peg.1415 CDS AZTX01000189.1 6709 5630 -1 - 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229920.peg.1416 CDS AZTX01000190.1 788 24 -2 - 765 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229920.peg.1417 CDS AZTX01000190.1 879 757 -3 - 123 hypothetical protein - none -
fig|6666666.229920.peg.1418 CDS AZTX01000190.1 2278 914 -1 - 1365 lipoprotein, putative - none -
fig|6666666.229920.peg.1419 CDS AZTX01000190.1 2447 2325 -2 - 123 hypothetical protein - none -
fig|6666666.229920.peg.1420 CDS AZTX01000190.1 2641 2859 1 + 219 hypothetical protein - none -
fig|6666666.229920.peg.1421 CDS AZTX01000190.1 4030 3068 -1 - 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229920.peg.1422 CDS AZTX01000190.1 4733 4095 -2 - 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229920.peg.1423 CDS AZTX01000190.1 5078 4779 -2 - 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229920.peg.1424 CDS AZTX01000190.1 6341 5151 -2 - 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229920.peg.1425 CDS AZTX01000190.1 7229 6372 -2 - 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229920.peg.1426 CDS AZTX01000190.1 8399 7278 -2 - 1122 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229920.peg.1427 CDS AZTX01000190.1 10347 8386 -3 - 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229920.peg.1428 CDS AZTX01000190.1 10896 10360 -3 - 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229920.peg.1429 CDS AZTX01000190.1 11195 10887 -2 - 309 Iojap protein - none -
fig|6666666.229920.peg.1430 CDS AZTX01000190.1 12518 11262 -2 - 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229920.peg.1431 CDS AZTX01000190.1 12843 14081 3 + 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229920.peg.1432 CDS AZTX01000190.1 15441 14206 -3 - 1236 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229920.peg.1433 CDS AZTX01000190.1 15521 15661 2 + 141 hypothetical protein - none -
fig|6666666.229920.peg.1434 CDS AZTX01000190.1 15900 15670 -3 - 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.1435 CDS AZTX01000190.1 16901 16173 -2 - 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229920.peg.1436 CDS AZTX01000190.1 17864 16926 -2 - 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229920.peg.1437 CDS AZTX01000190.1 18921 17971 -3 - 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229920.peg.1438 CDS AZTX01000191.1 222 61 -3 - 162 Mobile element protein - none -
fig|6666666.229920.peg.1439 CDS AZTX01000191.1 847 590 -1 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229920.peg.1440 CDS AZTX01000191.1 1038 847 -3 - 192 LSU ribosomal protein L29p (L35e) - none -
fig|6666666.229920.peg.1441 CDS AZTX01000191.1 1448 1038 -2 - 411 LSU ribosomal protein L16p (L10e) - none -
fig|6666666.229920.peg.1442 CDS AZTX01000191.1 2169 1462 -3 - 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229920.peg.1443 CDS AZTX01000191.1 2518 2186 -1 - 333 LSU ribosomal protein L22p (L17e) - none -
fig|6666666.229920.peg.1444 CDS AZTX01000191.1 2804 2529 -2 - 276 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229920.peg.1445 CDS AZTX01000191.1 3651 2830 -3 - 822 LSU ribosomal protein L2p (L8e) - none -
fig|6666666.229920.peg.1446 CDS AZTX01000191.1 3974 3672 -2 - 303 LSU ribosomal protein L23p (L23Ae) - none -
fig|6666666.229920.peg.1447 CDS AZTX01000191.1 4573 3971 -1 - 603 LSU ribosomal protein L4p (L1e) - none -
fig|6666666.229920.peg.1448 CDS AZTX01000191.1 5215 4589 -1 - 627 LSU ribosomal protein L3p (L3e) - none -
fig|6666666.229920.peg.1449 CDS AZTX01000191.1 5543 5232 -2 - 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229920.peg.1450 CDS AZTX01000191.1 6689 5793 -2 - 897 Transcriptional regulators, LysR family - none -
fig|6666666.229920.peg.1451 CDS AZTX01000192.1 993 319 -3 - 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229920.peg.1452 CDS AZTX01000192.1 1670 996 -2 - 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229920.peg.1453 CDS AZTX01000192.1 1822 2100 1 + 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229920.peg.1454 CDS AZTX01000192.1 2100 2795 3 + 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229920.peg.1455 CDS AZTX01000192.1 2792 3271 2 + 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229920.peg.1456 CDS AZTX01000192.1 3268 4278 1 + 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229920.peg.1457 CDS AZTX01000192.1 4311 5051 3 + 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229920.peg.1458 CDS AZTX01000192.1 5079 5654 3 + 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229920.peg.1459 CDS AZTX01000192.1 5669 5860 2 + 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229920.peg.1460 CDS AZTX01000192.1 5877 7046 3 + 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229920.peg.1461 CDS AZTX01000192.1 7364 7197 -2 - 168 hypothetical protein - none -
fig|6666666.229920.peg.1462 CDS AZTX01000192.1 7568 7413 -2 - 156 Mobile element protein - none -
fig|6666666.229920.peg.1463 CDS AZTX01000192.1 8698 7676 -1 - 1023 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229920.peg.1464 CDS AZTX01000193.1 1457 1041 -2 - 417 Probable phospholipase protein - none -
fig|6666666.229920.peg.1465 CDS AZTX01000195.1 96 1697 3 + 1602 Dca - none -
fig|6666666.229920.peg.1466 CDS AZTX01000195.1 1807 1661 -1 - 147 hypothetical protein - none -
fig|6666666.229920.peg.1467 CDS AZTX01000195.1 1956 2522 3 + 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229920.peg.1468 CDS AZTX01000195.1 2532 3764 3 + 1233 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229920.peg.1469 CDS AZTX01000195.1 4150 3827 -1 - 324 FIG074102: hypothetical protein - none -
fig|6666666.229920.peg.1470 CDS AZTX01000195.1 4343 4143 -2 - 201 Phage-related protein - none -
fig|6666666.229920.peg.1471 CDS AZTX01000195.1 5454 4609 -3 - 846 membrane protein, putative - none -
fig|6666666.229920.peg.1472 CDS AZTX01000196.1 333 187 -3 - 147 hypothetical protein - none -
fig|6666666.229920.peg.1473 CDS AZTX01000198.1 33 203 3 + 171 Chloride channel protein - none -
fig|6666666.229920.peg.1474 CDS AZTX01000198.1 206 1189 2 + 984 tRNA dihydrouridine synthase A - none -
fig|6666666.229920.peg.1475 CDS AZTX01000198.1 2237 1245 -2 - 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229920.peg.1476 CDS AZTX01000200.1 5 382 2 + 378 hypothetical protein - none -
fig|6666666.229920.peg.1477 CDS AZTX01000201.1 1529 96 -2 - 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229920.peg.1478 CDS AZTX01000201.1 2928 1516 -3 - 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229920.peg.1479 CDS AZTX01000201.1 4624 3122 -1 - 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229920.peg.1480 CDS AZTX01000201.1 5514 4639 -3 - 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229920.peg.1481 CDS AZTX01000201.1 5798 5511 -2 - 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229920.peg.1482 CDS AZTX01000201.1 6845 5838 -2 - 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229920.peg.1483 CDS AZTX01000201.1 7011 6883 -3 - 129 hypothetical protein - none -
fig|6666666.229920.peg.1484 CDS AZTX01000201.1 7091 7987 2 + 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229920.peg.1485 CDS AZTX01000202.1 1036 2466 1 + 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229920.peg.1486 CDS AZTX01000202.1 2888 2508 -2 - 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229920.peg.1487 CDS AZTX01000202.1 4084 2885 -1 - 1200 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229920.peg.1488 CDS AZTX01000202.1 4590 4090 -3 - 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229920.peg.1489 CDS AZTX01000202.1 5572 4607 -1 - 966 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Bacteria
fig|6666666.229920.peg.1490 CDS AZTX01000202.1 5713 6129 1 + 417 putative membrane protein - none -
fig|6666666.229920.peg.1491 CDS AZTX01000202.1 7361 6219 -2 - 1143 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229920.peg.1492 CDS AZTX01000202.1 8230 7358 -1 - 873 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229920.peg.1493 CDS AZTX01000202.1 8729 8232 -2 - 498 FIG00697418: hypothetical protein - none -
fig|6666666.229920.peg.1494 CDS AZTX01000203.1 20 1840 2 + 1821 Chaperone protein HtpG Protein chaperones
fig|6666666.229920.peg.1495 CDS AZTX01000203.1 1906 2250 1 + 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352
fig|6666666.229920.peg.1496 CDS AZTX01000203.1 2387 3520 2 + 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229920.peg.1497 CDS AZTX01000203.1 3522 4202 3 + 681 FIG009095: D,D-carboxypeptidase family protein CBSS-584.1.peg.1352
fig|6666666.229920.peg.1498 CDS AZTX01000203.1 4448 5071 2 + 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229920.peg.1499 CDS AZTX01000203.1 5122 5946 1 + 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229920.peg.1500 CDS AZTX01000203.1 7284 6457 -3 - 828 FIG00711691: hypothetical protein - none -
fig|6666666.229920.peg.1501 CDS AZTX01000203.1 7721 7257 -2 - 465 FIG00710847: hypothetical protein - none -
fig|6666666.229920.peg.1502 CDS AZTX01000203.1 7943 8773 2 + 831 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229920.peg.1503 CDS AZTX01000203.1 8898 10112 3 + 1215 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229920.peg.1504 CDS AZTX01000203.1 10847 10191 -2 - 657 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.1505 CDS AZTX01000204.1 729 241 -3 - 489 Probable lipoprotein nlpC precursor - none -
fig|6666666.229920.peg.1506 CDS AZTX01000204.1 1077 781 -3 - 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229920.peg.1507 CDS AZTX01000204.1 3471 1081 -3 - 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229920.peg.1508 CDS AZTX01000204.1 4480 3491 -1 - 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229920.peg.1509 CDS AZTX01000204.1 5695 4820 -1 - 876 Probable protease htpX homolog - none -
fig|6666666.229920.peg.1510 CDS AZTX01000204.1 6378 7313 3 + 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) KDO2-Lipid A biosynthesis
fig|6666666.229920.peg.1511 CDS AZTX01000204.1 7313 7867 2 + 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) KDO2-Lipid A biosynthesis
fig|6666666.229920.peg.1512 CDS AZTX01000205.1 1363 302 -1 - 1062 hypothetical protein - none -
fig|6666666.229920.peg.1513 CDS AZTX01000205.1 2115 1360 -3 - 756 hypothetical protein - none -
fig|6666666.229920.peg.1514 CDS AZTX01000205.1 3394 2117 -1 - 1278 hypothetical protein - none -
fig|6666666.229920.peg.1515 CDS AZTX01000205.1 4772 3384 -2 - 1389 hypothetical protein - none -
fig|6666666.229920.peg.1516 CDS AZTX01000206.1 98 877 2 + 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229920.peg.1517 CDS AZTX01000206.1 895 1032 1 + 138 hypothetical protein - none -
fig|6666666.229920.peg.1518 CDS AZTX01000208.1 636 142 -3 - 495 Protein yfbU - none -
fig|6666666.229920.peg.1519 CDS AZTX01000208.1 1430 654 -2 - 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229920.peg.1520 CDS AZTX01000208.1 3079 1496 -1 - 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229920.peg.1521 CDS AZTX01000208.1 4476 3145 -3 - 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229920.peg.1522 CDS AZTX01000208.1 5024 4497 -2 - 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229920.peg.1523 CDS AZTX01000208.1 5239 5946 1 + 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229920.peg.1524 CDS AZTX01000208.1 6597 6328 -3 - 270 hypothetical protein - none -
fig|6666666.229920.peg.1525 CDS AZTX01000208.1 6898 6581 -1 - 318 hypothetical protein - none -
fig|6666666.229920.peg.1526 CDS AZTX01000208.1 8166 6922 -3 - 1245 Tryptophan-specific transport protein - none -
fig|6666666.229920.peg.1527 CDS AZTX01000208.1 8328 8855 3 + 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229920.peg.1528 CDS AZTX01000208.1 8931 9704 3 + 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229920.peg.1529 CDS AZTX01000208.1 10550 9792 -2 - 759 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229920.peg.1530 CDS AZTX01000208.1 11006 10560 -2 - 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229920.peg.1531 CDS AZTX01000208.1 11480 11010 -2 - 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229920.peg.1532 CDS AZTX01000209.1 114 272 3 + 159 hypothetical protein - none -
fig|6666666.229920.peg.1533 CDS AZTX01000209.1 698 537 -2 - 162 hypothetical protein - none -
fig|6666666.229920.peg.1534 CDS AZTX01000210.1 63 2684 3 + 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229920.peg.1535 CDS AZTX01000210.1 3721 2768 -1 - 954 Inositol transport system permease protein Inositol catabolism
fig|6666666.229920.peg.1536 CDS AZTX01000210.1 5277 3772 -3 - 1506 Inositol transport system ATP-binding protein Inositol catabolism
fig|6666666.229920.peg.1537 CDS AZTX01000210.1 6278 5346 -2 - 933 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229920.peg.1538 CDS AZTX01000210.1 7210 6362 -1 - 849 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229920.peg.1539 CDS AZTX01000211.1 110 589 2 + 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229920.peg.1540 CDS AZTX01000211.1 796 590 -1 - 207 hypothetical protein - none -
fig|6666666.229920.peg.1541 CDS AZTX01000211.1 1065 1418 3 + 354 LSU ribosomal protein L20p - none -
fig|6666666.229920.peg.1542 CDS AZTX01000214.1 2228 414 -2 - 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229920.peg.1543 CDS AZTX01000214.1 2965 2255 -1 - 711 Protein HI0205 precursor - none -
fig|6666666.229920.peg.1544 CDS AZTX01000215.1 6522 2494 -3 - 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229920.peg.1545 CDS AZTX01000215.1 7164 6793 -3 - 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster
fig|6666666.229920.peg.1546 CDS AZTX01000215.1 7707 7216 -3 - 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster
fig|6666666.229920.peg.1547 CDS AZTX01000215.1 8048 7878 -2 - 171 hypothetical protein - none -
fig|6666666.229920.peg.1548 CDS AZTX01000215.1 8752 8063 -1 - 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster
fig|6666666.229920.peg.1549 CDS AZTX01000215.1 9185 8757 -2 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster
fig|6666666.229920.peg.1550 CDS AZTX01000215.1 9892 9341 -1 - 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229920.peg.1551 CDS AZTX01000215.1 10304 9894 -2 - 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229920.peg.1552 CDS AZTX01000216.1 14 2278 2 + 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229920.peg.1553 CDS AZTX01000216.1 2422 3066 1 + 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229920.peg.1554 CDS AZTX01000217.1 337 1521 1 + 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229920.peg.1555 CDS AZTX01000217.1 1536 2222 3 + 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229920.peg.1556 CDS AZTX01000217.1 2222 3472 2 + 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229920.peg.1557 CDS AZTX01000218.1 23 1237 2 + 1215 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229920.peg.1558 CDS AZTX01000219.1 367 92 -1 - 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229920.peg.1559 CDS AZTX01000219.1 684 397 -3 - 288 Hydrogenase-2 operon protein hybE - none -
fig|6666666.229920.peg.1560 CDS AZTX01000219.1 2253 823 -3 - 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229920.peg.1561 CDS AZTX01000219.1 2540 2262 -2 - 279 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.1562 CDS AZTX01000219.1 2828 2550 -2 - 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.1563 CDS AZTX01000219.1 3924 2923 -3 - 1002 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229920.peg.1564 CDS AZTX01000219.1 4328 3936 -2 - 393 putative - none -
fig|6666666.229920.peg.1565 CDS AZTX01000219.1 4992 4402 -3 - 591 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229920.peg.1566 CDS AZTX01000219.1 5164 5003 -1 - 162 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229920.peg.1567 CDS AZTX01000220.1 503 294 -2 - 210 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229920.peg.1568 CDS AZTX01000220.1 2752 665 -1 - 2088 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229920.peg.1569 CDS AZTX01000221.1 2092 50 -1 - 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229920.peg.1570 CDS AZTX01000222.1 1197 55 -3 - 1143 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229920.peg.1571 CDS AZTX01000224.1 65 190 2 + 126 hypothetical protein - none -
fig|6666666.229920.peg.1572 CDS AZTX01000224.1 216 422 3 + 207 FIG01055344: hypothetical protein - none -
fig|6666666.229920.peg.1573 CDS AZTX01000224.1 508 3282 1 + 2775 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229920.peg.1574 CDS AZTX01000224.1 3362 3856 2 + 495 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229920.peg.1575 CDS AZTX01000224.1 3856 4800 1 + 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229920.peg.1576 CDS AZTX01000226.1 282 431 3 + 150 hypothetical protein - none -
fig|6666666.229920.peg.1577 CDS AZTX01000226.1 808 966 1 + 159 hypothetical protein - none -
fig|6666666.229920.peg.1578 CDS AZTX01000226.1 1922 1122 -2 - 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229920.peg.1579 CDS AZTX01000227.1 1453 65 -1 - 1389 Putative protease - none -
fig|6666666.229920.peg.1580 CDS AZTX01000227.1 1981 1625 -1 - 357 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229920.peg.1581 CDS AZTX01000228.1 1092 46 -3 - 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229920.peg.1582 CDS AZTX01000228.1 3165 1108 -3 - 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229920.peg.1583 CDS AZTX01000228.1 3396 3193 -3 - 204 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229920.peg.1584 CDS AZTX01000229.1 1229 198 -2 - 1032 putative membrane protein - none -
fig|6666666.229920.peg.1585 CDS AZTX01000229.1 1909 1244 -1 - 666 putative exported protein - none -
fig|6666666.229920.peg.1586 CDS AZTX01000230.1 69 1442 3 + 1374 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229920.peg.1587 CDS AZTX01000230.1 1573 2562 1 + 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229920.peg.1588 CDS AZTX01000230.1 2848 4254 1 + 1407 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229920.peg.1589 CDS AZTX01000230.1 4660 4358 -1 - 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229920.peg.1590 CDS AZTX01000230.1 5571 4693 -3 - 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229920.peg.1591 CDS AZTX01000230.1 6687 5590 -3 - 1098 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229920.peg.1592 CDS AZTX01000230.1 7716 6712 -3 - 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229920.peg.1593 CDS AZTX01000230.1 8761 7730 -1 - 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229920.peg.1594 CDS AZTX01000230.1 10287 8770 -3 - 1518 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229920.peg.1595 CDS AZTX01000231.1 5909 138 -2 - 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229920.peg.1596 CDS AZTX01000231.1 7423 5975 -1 - 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229920.peg.1597 CDS AZTX01000232.1 44 658 2 + 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229920.peg.1598 CDS AZTX01000232.1 667 1686 1 + 1020 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229920.peg.1599 CDS AZTX01000232.1 2051 1740 -2 - 312 Chromosome segregation ATPases - none -
fig|6666666.229920.peg.1600 CDS AZTX01000233.1 106 1479 1 + 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229920.peg.1601 CDS AZTX01000234.1 124 1125 1 + 1002 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229920.peg.1602 CDS AZTX01000235.1 159 1541 3 + 1383 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229920.peg.1603 CDS AZTX01000235.1 1684 2346 1 + 663 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229920.peg.1604 CDS AZTX01000235.1 2322 2489 3 + 168 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229920.peg.1605 CDS AZTX01000235.1 2458 2604 1 + 147 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229920.peg.1606 CDS AZTX01000235.1 2614 3552 1 + 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229920.peg.1607 CDS AZTX01000235.1 3562 4545 1 + 984 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229920.peg.1608 CDS AZTX01000235.1 4542 5540 3 + 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229920.peg.1609 CDS AZTX01000235.1 6355 5648 -1 - 708 Aerobic respiration control protein arcA - none -
fig|6666666.229920.peg.1610 CDS AZTX01000236.1 2215 56 -1 - 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229920.peg.1611 CDS AZTX01000236.1 2514 2302 -3 - 213 Copper chaperone Copper homeostasis
fig|6666666.229920.peg.1612 CDS AZTX01000236.1 2773 2994 1 + 222 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229920.peg.1613 CDS AZTX01000236.1 3055 3270 1 + 216 Mobile element protein - none -
fig|6666666.229920.peg.1614 CDS AZTX01000237.1 553 146 -1 - 408 putative lipoprotein - none -
fig|6666666.229920.peg.1615 CDS AZTX01000237.1 1950 562 -3 - 1389 putative exported protein - none -
fig|6666666.229920.peg.1616 CDS AZTX01000237.1 2821 1961 -1 - 861 FIG00698030: hypothetical protein - none -
fig|6666666.229920.peg.1617 CDS AZTX01000237.1 3453 2821 -3 - 633 Possible exported protein - none -
fig|6666666.229920.peg.1618 CDS AZTX01000237.1 3836 3465 -2 - 372 FIG00696467: hypothetical protein - none -
fig|6666666.229920.peg.1619 CDS AZTX01000237.1 4262 3855 -2 - 408 FIG00696269: hypothetical protein - none -
fig|6666666.229920.peg.1620 CDS AZTX01000237.1 4455 4279 -3 - 177 hypothetical protein - none -
fig|6666666.229920.peg.1621 CDS AZTX01000237.1 4841 4518 -2 - 324 FIG00696053: hypothetical protein - none -
fig|6666666.229920.peg.1622 CDS AZTX01000238.1 1204 65 -1 - 1140 Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229920.peg.1623 CDS AZTX01000238.1 2803 1295 -1 - 1509 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) Inositol catabolism
fig|6666666.229920.peg.1624 CDS AZTX01000239.1 1205 735 -2 - 471 Flp pilus assembly protein RcpB - none -
fig|6666666.229920.peg.1625 CDS AZTX01000239.1 2497 1235 -1 - 1263 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly - none -
fig|6666666.229920.peg.1626 CDS AZTX01000239.1 3443 2619 -2 - 825 Flp pilus assembly protein RcpC/CpaB - none -
fig|6666666.229920.peg.1627 CDS AZTX01000241.1 1307 447 -2 - 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229920.peg.1628 CDS AZTX01000241.1 2097 1348 -3 - 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229920.peg.1629 CDS AZTX01000241.1 3280 2189 -1 - 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229920.peg.1630 CDS AZTX01000242.1 987 169 -3 - 819 hypothetical protein - none -
fig|6666666.229920.peg.1631 CDS AZTX01000243.1 59 799 2 + 741 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229920.peg.1632 CDS AZTX01000243.1 934 1563 1 + 630 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229920.peg.1633 CDS AZTX01000243.1 1670 3622 2 + 1953 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229920.peg.1634 CDS AZTX01000243.1 3818 4255 2 + 438 Putative transporting ATPase - none -
fig|6666666.229920.peg.1635 CDS AZTX01000243.1 5439 4381 -3 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229920.peg.1636 CDS AZTX01000243.1 7155 5461 -3 - 1695 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229920.peg.1637 CDS AZTX01000243.1 8237 7158 -2 - 1080 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229920.peg.1638 CDS AZTX01000243.1 9257 8259 -2 - 999 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229920.peg.1639 CDS AZTX01000244.1 116 1234 2 + 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229920.peg.1640 CDS AZTX01000244.1 1239 2306 3 + 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229920.peg.1641 CDS AZTX01000244.1 2481 3365 3 + 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229920.peg.1642 CDS AZTX01000244.1 3515 4330 2 + 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229920.peg.1643 CDS AZTX01000245.1 114 1229 3 + 1116 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.229920.peg.1644 CDS AZTX01000245.1 1813 1625 -1 - 189 hypothetical protein - none -
fig|6666666.229920.peg.1645 CDS AZTX01000246.1 156 716 3 + 561 Protein of unknown function DUF414 - none -
fig|6666666.229920.peg.1646 CDS AZTX01000246.1 729 1163 3 + 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229920.peg.1647 CDS AZTX01000246.1 1182 2549 3 + 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229920.peg.1648 CDS AZTX01000246.1 3066 2623 -3 - 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229920.peg.1649 CDS AZTX01000247.1 1987 644 -1 - 1344 putative hexose phosphate transport protein - none -
fig|6666666.229920.peg.1650 CDS AZTX01000247.1 2808 2005 -3 - 804 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229920.peg.1651 CDS AZTX01000248.1 37 447 1 + 411 hypothetical protein - none -
fig|6666666.229920.peg.1652 CDS AZTX01000248.1 487 1317 1 + 831 hypothetical protein - none -
fig|6666666.229920.peg.1653 CDS AZTX01000248.1 1463 1585 2 + 123 hypothetical protein - none -
fig|6666666.229920.peg.1654 CDS AZTX01000249.1 1341 25 -3 - 1317 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229920.peg.1655 CDS AZTX01000249.1 1956 1432 -3 - 525 FIG00696143: hypothetical protein - none -
fig|6666666.229920.peg.1656 CDS AZTX01000249.1 2770 1988 -1 - 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229920.peg.1657 CDS AZTX01000249.1 3757 2774 -1 - 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229920.peg.1658 CDS AZTX01000249.1 4386 3754 -3 - 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229920.peg.1659 CDS AZTX01000249.1 5431 4388 -1 - 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229920.peg.1660 CDS AZTX01000250.1 101 2566 2 + 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229920.peg.1661 CDS AZTX01000250.1 2731 2591 -1 - 141 hypothetical protein - none -
fig|6666666.229920.peg.1662 CDS AZTX01000250.1 3290 2685 -2 - 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229920.peg.1663 CDS AZTX01000251.1 68 232 2 + 165 hypothetical protein - none -
fig|6666666.229920.peg.1664 CDS AZTX01000252.1 48 983 3 + 936 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229920.peg.1665 CDS AZTX01000252.1 1038 1982 3 + 945 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229920.peg.1666 CDS AZTX01000253.1 44 268 2 + 225 FIG00807791: hypothetical protein - none -
fig|6666666.229920.peg.1667 CDS AZTX01000256.1 2913 1459 -3 - 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229920.peg.1668 CDS AZTX01000257.1 439 32 -1 - 408 Mobile element protein - none -
fig|6666666.229920.peg.1669 CDS AZTX01000258.1 1165 140 -1 - 1026 hypothetical protein - none -
fig|6666666.229920.peg.1670 CDS AZTX01000258.1 1423 1178 -1 - 246 hypothetical protein - none -
fig|6666666.229920.peg.1671 CDS AZTX01000259.1 4 1155 1 + 1152 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229920.peg.1672 CDS AZTX01000259.1 1447 1746 1 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229920.peg.1673 CDS AZTX01000259.1 1777 3627 1 + 1851 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229920.peg.1674 CDS AZTX01000259.1 3644 4609 2 + 966 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229920.peg.1675 CDS AZTX01000261.1 1032 358 -3 - 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229920.peg.1676 CDS AZTX01000261.1 1570 1109 -1 - 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229920.peg.1677 CDS AZTX01000261.1 3397 1625 -1 - 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229920.peg.1678 CDS AZTX01000262.1 1644 454 -3 - 1191 hypothetical protein - none -
fig|6666666.229920.peg.1679 CDS AZTX01000262.1 3268 1664 -1 - 1605 hypothetical protein - none -
fig|6666666.229920.peg.1680 CDS AZTX01000263.1 536 69 -2 - 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229920.peg.1681 CDS AZTX01000263.1 1886 549 -2 - 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229920.peg.1682 CDS AZTX01000263.1 2741 1914 -2 - 828 Dihydropteroate synthase (EC 2.5.1.15) Folate biosynthesis cluster
fig|6666666.229920.peg.1683 CDS AZTX01000263.1 3852 2911 -3 - 942 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229920.peg.1684 CDS AZTX01000263.1 3983 3846 -2 - 138 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229920.peg.1685 CDS AZTX01000264.1 155 430 2 + 276 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229920.peg.1686 CDS AZTX01000264.1 432 1148 3 + 717 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229920.peg.1687 CDS AZTX01000265.1 35 502 2 + 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229920.peg.1688 CDS AZTX01000265.1 526 1413 1 + 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229920.peg.1689 CDS AZTX01000265.1 1604 2185 2 + 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229920.peg.1690 CDS AZTX01000265.1 2185 2775 1 + 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229920.peg.1691 CDS AZTX01000267.1 59 1138 2 + 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229920.peg.1692 CDS AZTX01000267.1 1269 1147 -3 - 123 hypothetical protein - none -
fig|6666666.229920.peg.1693 CDS AZTX01000267.1 1284 2690 3 + 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229920.peg.1694 CDS AZTX01000267.1 2714 3796 2 + 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229920.peg.1695 CDS AZTX01000267.1 3812 5461 2 + 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229920.peg.1696 CDS AZTX01000268.1 909 154 -3 - 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229920.peg.1697 CDS AZTX01000268.1 1846 971 -1 - 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229920.peg.1698 CDS AZTX01000268.1 1889 2203 2 + 315 Uncharacterized protein PM1437 - none -
fig|6666666.229920.peg.1699 CDS AZTX01000268.1 2541 2215 -3 - 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229920.peg.1700 CDS AZTX01000268.1 3101 2553 -2 - 549 FIG00903983: hypothetical protein - none -
fig|6666666.229920.peg.1701 CDS AZTX01000269.1 122 244 2 + 123 hypothetical protein - none -
fig|6666666.229920.peg.1702 CDS AZTX01000269.1 354 1313 3 + 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229920.peg.1703 CDS AZTX01000269.1 1727 1512 -2 - 216 Thioredoxin - none -
fig|6666666.229920.peg.1704 CDS AZTX01000269.1 2930 1935 -2 - 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229920.peg.1705 CDS AZTX01000269.1 4123 2954 -1 - 1170 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229920.peg.1706 CDS AZTX01000270.1 1496 57 -2 - 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229920.peg.1707 CDS AZTX01000270.1 3008 1698 -2 - 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229920.peg.1708 CDS AZTX01000270.1 5044 3035 -1 - 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229920.peg.1709 CDS AZTX01000270.1 7236 5041 -3 - 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229920.peg.1710 CDS AZTX01000270.1 7793 7224 -2 - 570 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229920.peg.1711 CDS AZTX01000271.1 1400 171 -2 - 1230 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229920.peg.1712 CDS AZTX01000271.1 1967 1443 -2 - 525 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229920.peg.1713 CDS AZTX01000271.1 2869 2210 -1 - 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229920.peg.1714 CDS AZTX01000271.1 3279 2986 -3 - 294 COG1872 - none -
fig|6666666.229920.peg.1715 CDS AZTX01000271.1 3864 3304 -3 - 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229920.peg.1716 CDS AZTX01000271.1 4827 3880 -3 - 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229920.peg.1717 CDS AZTX01000271.1 4829 4948 2 + 120 hypothetical protein - none -
fig|6666666.229920.peg.1718 CDS AZTX01000271.1 5258 5389 2 + 132 hypothetical protein - none -
fig|6666666.229920.peg.1719 CDS AZTX01000272.1 59 988 2 + 930 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229920.peg.1720 CDS AZTX01000272.1 988 1782 1 + 795 Glutathione synthetase (EC 6.3.2.3) Cluster containing Glutathione synthetase;
Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229920.peg.1721 CDS AZTX01000272.1 1795 2829 1 + 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229920.peg.1722 CDS AZTX01000272.1 2912 3121 2 + 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229920.peg.1723 CDS AZTX01000273.1 1067 15 -2 - 1053 Outer membrane protein P2 precursor (OMP P2) - none -
fig|6666666.229920.peg.1724 CDS AZTX01000274.1 476 339 -2 - 138 Probable phospholipase protein - none -
fig|6666666.229920.peg.1725 CDS AZTX01000275.1 114 1331 3 + 1218 CRISPR-associated protein, Csy1 family CRISPRs
fig|6666666.229920.peg.1726 CDS AZTX01000275.1 1341 2300 3 + 960 CRISPR-associated protein, Csy2 family CRISPRs
fig|6666666.229920.peg.1727 CDS AZTX01000275.1 2300 3310 2 + 1011 CRISPR-associated protein, Csy3 family CRISPRs
fig|6666666.229920.peg.1728 CDS AZTX01000275.1 3313 3876 1 + 564 CRISPR-associated protein, Csy4 family CRISPRs
fig|6666666.229920.peg.1729 CDS AZTX01000275.1 7209 3922 -3 - 3288 CRISPR-associated helicase Cas3, Yersinia-type CRISPRs
fig|6666666.229920.peg.1730 CDS AZTX01000275.1 7952 7206 -2 - 747 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229920.peg.1731 CDS AZTX01000276.1 266 33 -2 - 234 hypothetical protein - none -
fig|6666666.229920.peg.1732 CDS AZTX01000277.1 792 82 -3 - 711 hypothetical protein - none -
fig|6666666.229920.peg.1733 CDS AZTX01000277.1 1475 798 -2 - 678 FIG00904286: hypothetical protein - none -
fig|6666666.229920.peg.1734 CDS AZTX01000277.1 1616 1969 2 + 354 Putative translation initiation inhibitor, yjgF family - none -
fig|6666666.229920.peg.1735 CDS AZTX01000278.1 353 60 -2 - 294 UPF0125 protein yfjF - none -
fig|6666666.229920.peg.1736 CDS AZTX01000278.1 726 346 -3 - 381 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229920.peg.1737 CDS AZTX01000278.1 847 1263 1 + 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229920.peg.1738 CDS AZTX01000278.1 2614 1802 -1 - 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229920.peg.1739 CDS AZTX01000278.1 3761 2742 -2 - 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229920.peg.1740 CDS AZTX01000279.1 2356 1256 -1 - 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229920.peg.1741 CDS AZTX01000280.1 864 4 -3 - 861 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229920.peg.1742 CDS AZTX01000280.1 1475 861 -2 - 615 ABC transporter ATP-binding protein - none -
fig|6666666.229920.peg.1743 CDS AZTX01000280.1 2275 1478 -1 - 798 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229920.peg.1744 CDS AZTX01000280.1 2636 2250 -2 - 387 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229920.peg.1745 CDS AZTX01000281.1 142 1155 1 + 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229920.peg.1746 CDS AZTX01000284.1 108 581 3 + 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229920.peg.1747 CDS AZTX01000284.1 588 1013 3 + 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229920.peg.1748 CDS AZTX01000284.1 1032 2015 3 + 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229920.peg.1749 CDS AZTX01000284.1 2025 2516 3 + 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229920.peg.1750 CDS AZTX01000284.1 2525 3148 2 + 624 L-lysine permease - none -
fig|6666666.229920.peg.1751 CDS AZTX01000284.1 3170 3982 2 + 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229920.peg.1752 CDS AZTX01000284.1 4320 4072 -3 - 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229920.peg.1753 CDS AZTX01000284.1 4659 4390 -3 - 270 hypothetical protein - none -
fig|6666666.229920.peg.1754 CDS AZTX01000284.1 5811 4681 -3 - 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229920.peg.1755 CDS AZTX01000285.1 77 466 2 + 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229920.peg.1756 CDS AZTX01000285.1 3787 905 -1 - 2883 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229920.peg.1757 CDS AZTX01000286.1 96 1640 3 + 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229920.peg.1758 CDS AZTX01000286.1 1664 2203 2 + 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229920.peg.1759 CDS AZTX01000286.1 2392 2246 -1 - 147 hypothetical protein - none -
fig|6666666.229920.peg.1760 CDS AZTX01000286.1 3833 2403 -2 - 1431 Transglycosylase, Slt family - none -
fig|6666666.229920.peg.1761 CDS AZTX01000286.1 4207 3854 -1 - 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate biosynthesis cluster
fig|6666666.229920.peg.1762 CDS AZTX01000286.1 4304 4900 2 + 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.1763 CDS AZTX01000286.1 5433 4990 -3 - 444 FIG00904084: hypothetical protein - none -
fig|6666666.229920.peg.1764 CDS AZTX01000286.1 5528 6355 2 + 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229920.peg.1765 CDS AZTX01000286.1 7348 6557 -1 - 792 putative lipoprotein - none -
fig|6666666.229920.peg.1766 CDS AZTX01000287.1 383 502 2 + 120 hypothetical protein - none -
fig|6666666.229920.peg.1767 CDS AZTX01000288.1 386 532 2 + 147 hypothetical protein - none -
fig|6666666.229920.peg.1768 CDS AZTX01000288.1 1494 574 -3 - 921 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229920.peg.1769 CDS AZTX01000288.1 1880 1494 -2 - 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229920.peg.1770 CDS AZTX01000288.1 4904 2412 -2 - 2493 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229920.peg.1771 CDS AZTX01000288.1 6416 4920 -2 - 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229920.peg.1772 CDS AZTX01000288.1 6899 6444 -2 - 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229920.peg.1773 CDS AZTX01000289.1 4 2703 1 + 2700 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229920.peg.1774 CDS AZTX01000289.1 2780 3184 2 + 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229920.peg.1775 CDS AZTX01000290.1 305 2521 2 + 2217 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229920.peg.1776 CDS AZTX01000290.1 2554 2862 1 + 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229920.peg.1777 CDS AZTX01000290.1 2840 3613 2 + 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229920.peg.1778 CDS AZTX01000292.1 852 226 -3 - 627 Probable phospholipase protein - none -
fig|6666666.229920.peg.1779 CDS AZTX01000293.1 62 373 2 + 312 hypothetical protein - none -
fig|6666666.229920.peg.1780 CDS AZTX01000293.1 384 1016 3 + 633 hypothetical protein - none -
fig|6666666.229920.peg.1781 CDS AZTX01000293.1 998 3289 2 + 2292 hypothetical protein - none -
fig|6666666.229920.peg.1782 CDS AZTX01000294.1 70 222 1 + 153 hypothetical protein - none -
fig|6666666.229920.peg.1783 CDS AZTX01000294.1 222 1928 3 + 1707 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229920.peg.1784 CDS AZTX01000294.1 2023 2325 1 + 303 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229920.peg.1785 CDS AZTX01000294.1 2322 4418 3 + 2097 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229920.peg.1786 CDS AZTX01000295.1 1098 40 -3 - 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229920.peg.1787 CDS AZTX01000296.1 2704 77 -1 - 2628 Iron siderophore receptor protein - none -
fig|6666666.229920.peg.1788 CDS AZTX01000297.1 208 2106 1 + 1899 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229920.peg.1789 CDS AZTX01000297.1 2309 2145 -2 - 165 hypothetical protein - none -
fig|6666666.229920.peg.1790 CDS AZTX01000299.1 387 572 3 + 186 Mobile element protein - none -
fig|6666666.229920.peg.1791 CDS AZTX01000300.1 2023 92 -1 - 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229920.peg.1792 CDS AZTX01000300.1 2263 3138 1 + 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229920.peg.1793 CDS AZTX01000301.1 59 1057 2 + 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229920.peg.1794 CDS AZTX01000301.1 1279 2658 1 + 1380 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229920.peg.1795 CDS AZTX01000302.1 63 344 3 + 282 HipB protein Persister Cells
fig|6666666.229920.peg.1796 CDS AZTX01000302.1 477 298 -3 - 180 hypothetical protein - none -
fig|6666666.229920.peg.1797 CDS AZTX01000302.1 719 961 2 + 243 HipA protein Persister Cells
fig|6666666.229920.peg.1798 CDS AZTX01000302.1 1449 958 -3 - 492 hypothetical protein - none -
fig|6666666.229920.peg.1799 CDS AZTX01000303.1 83 700 2 + 618 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229920.peg.1800 CDS AZTX01000303.1 778 3552 1 + 2775 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229920.peg.1801 CDS AZTX01000303.1 3951 3619 -3 - 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229920.peg.1802 CDS AZTX01000303.1 4680 3952 -3 - 729 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229920.peg.1803 CDS AZTX01000303.1 5617 4685 -1 - 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229920.peg.1804 CDS AZTX01000304.1 488 342 -2 - 147 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229920.peg.1805 CDS AZTX01000305.1 1098 106 -3 - 993 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229920.peg.1806 CDS AZTX01000305.1 1282 1986 1 + 705 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229920.peg.1807 CDS AZTX01000305.1 3527 2070 -2 - 1458 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis;
tRNA modification Bacteria;
tRNA modification Bacteria
fig|6666666.229920.peg.1808 CDS AZTX01000306.1 60 1079 3 + 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229920.peg.1809 CDS AZTX01000307.1 126 1052 3 + 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229920.peg.1810 CDS AZTX01000307.1 1076 1522 2 + 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229920.peg.1811 CDS AZTX01000307.1 1531 2142 1 + 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229920.peg.1812 CDS AZTX01000307.1 2142 2705 3 + 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229920.peg.1813 CDS AZTX01000308.1 1246 1076 -1 - 171 LSU ribosomal protein L32p - none -
fig|6666666.229920.peg.1814 CDS AZTX01000308.1 1787 1263 -2 - 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229920.peg.1815 CDS AZTX01000308.1 2500 1859 -1 - 642 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229920.peg.1816 CDS AZTX01000308.1 3240 2500 -3 - 741 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229920.peg.1817 CDS AZTX01000308.1 3908 3258 -2 - 651 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229920.peg.1818 CDS AZTX01000308.1 5064 3889 -3 - 1176 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229920.peg.1819 CDS AZTX01000308.1 6346 5057 -1 - 1290 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229920.peg.1820 CDS AZTX01000308.1 6569 7438 2 + 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.1821 CDS AZTX01000308.1 7464 8096 3 + 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229920.peg.1822 CDS AZTX01000308.1 8820 8161 -3 - 660 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229920.peg.1823 CDS AZTX01000308.1 8980 8801 -1 - 180 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229920.peg.1824 CDS AZTX01000309.1 60 683 3 + 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229920.peg.1825 CDS AZTX01000309.1 835 1212 1 + 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229920.peg.1826 CDS AZTX01000309.1 1199 1525 2 + 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229920.peg.1827 CDS AZTX01000309.1 1538 1768 2 + 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229920.peg.1828 CDS AZTX01000309.1 1784 2233 2 + 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229920.peg.1829 CDS AZTX01000309.1 2451 3569 3 + 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
YrdC-YciO-Sua5 protein family
fig|6666666.229920.peg.1830 CDS AZTX01000309.1 4707 3625 -3 - 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229920.peg.1831 CDS AZTX01000309.1 6381 4939 -3 - 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229920.peg.1832 CDS AZTX01000310.1 151 855 1 + 705 hypothetical protein - none -
fig|6666666.229920.peg.1833 CDS AZTX01000311.1 89 259 2 + 171 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229920.peg.1834 CDS AZTX01000311.1 364 945 1 + 582 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229920.peg.1835 CDS AZTX01000311.1 1099 1215 1 + 117 hypothetical protein - none -
fig|6666666.229920.peg.1836 CDS AZTX01000311.1 2548 1217 -1 - 1332 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229920.peg.1837 CDS AZTX01000312.1 1551 271 -3 - 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily - none -
fig|6666666.229920.peg.1838 CDS AZTX01000313.1 1106 348 -2 - 759 miscellaneous; hypothetical/partial homology - none -
fig|6666666.229920.peg.1839 CDS AZTX01000313.1 1372 1106 -1 - 267 Probable phospholipase protein - none -
fig|6666666.229920.peg.1840 CDS AZTX01000314.1 136 2046 1 + 1911 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain Inositol catabolism;
Inositol catabolism
fig|6666666.229920.peg.1841 CDS AZTX01000314.1 2922 2083 -3 - 840 Predicted transcriptional regulator of the myo-inositol catabolic operon Inositol catabolism
fig|6666666.229920.peg.1842 CDS AZTX01000316.1 711 184 -3 - 528 probable integral membrane protein NMA1777 - none -
fig|6666666.229920.peg.1843 CDS AZTX01000316.1 1064 762 -2 - 303 probable integral membrane protein NMA1777 - none -
fig|6666666.229920.peg.1844 CDS AZTX01000316.1 1507 1064 -1 - 444 Transcriptional regulator, MarR family - none -
fig|6666666.229920.peg.1845 CDS AZTX01000317.1 1843 104 -1 - 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229920.peg.1846 CDS AZTX01000317.1 2105 1848 -2 - 258 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229920.peg.1847 CDS AZTX01000317.1 2198 3223 2 + 1026 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229920.peg.1848 CDS AZTX01000317.1 3289 3702 1 + 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229920.peg.1849 CDS AZTX01000317.1 3744 4439 3 + 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229920.peg.1850 CDS AZTX01000318.1 1038 355 -3 - 684 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229920.peg.1851 CDS AZTX01000318.1 1703 1041 -2 - 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229920.peg.1852 CDS AZTX01000318.1 2427 1708 -3 - 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229920.peg.1853 CDS AZTX01000318.1 2765 2448 -2 - 318 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229920.peg.1854 CDS AZTX01000319.1 115 1659 1 + 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229920.peg.1855 CDS AZTX01000319.1 1940 1722 -2 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229920.peg.1856 CDS AZTX01000319.1 1995 2117 3 + 123 hypothetical protein - none -
fig|6666666.229920.peg.1857 CDS AZTX01000321.1 259 1395 1 + 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229920.peg.1858 CDS AZTX01000321.1 2530 1439 -1 - 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229920.peg.1859 CDS AZTX01000321.1 3160 2621 -1 - 540 hypothetical protein - none -
fig|6666666.229920.peg.1860 CDS AZTX01000321.1 3687 3277 -3 - 411 ABC-type Fe3+-hydroxamate transport system, periplasmic component - none -
fig|6666666.229920.peg.1862 CDS AZTX01000322.1 2249 192 -2 - 2058 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229920.peg.1864 CDS AZTX01000323.1 77 664 2 + 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229920.peg.1865 CDS AZTX01000323.1 679 870 1 + 192 hypothetical protein - none -
fig|6666666.229920.peg.1866 CDS AZTX01000323.1 1435 953 -1 - 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229920.peg.1867 CDS AZTX01000323.1 1586 1777 2 + 192 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229920.peg.1868 CDS AZTX01000325.1 45 275 3 + 231 hypothetical protein - none -
fig|6666666.229920.peg.1869 CDS AZTX01000325.1 280 414 1 + 135 hypothetical protein - none -
fig|6666666.229920.peg.1870 CDS AZTX01000326.1 268 137 -1 - 132 hypothetical protein - none -
fig|6666666.229920.peg.1871 CDS AZTX01000327.1 440 42 -2 - 399 DNA-binding protein H-NS - none -
fig|6666666.229920.peg.1872 CDS AZTX01000327.1 881 2413 2 + 1533 Na+/H+ antiporter - none -
fig|6666666.229920.peg.1873 CDS AZTX01000328.1 58 1467 1 + 1410 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229920.peg.1874 CDS AZTX01000330.1 699 133 -3 - 567 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229920.peg.1875 CDS AZTX01000332.1 260 460 2 + 201 Mobile element protein - none -
fig|6666666.229920.peg.1876 CDS AZTX01000336.1 1376 273 -2 - 1104 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229920.peg.1877 CDS AZTX01000336.1 1569 2282 3 + 714 SanA protein - none -
fig|6666666.229920.peg.1878 CDS AZTX01000336.1 3252 2266 -3 - 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229920.peg.1879 CDS AZTX01000337.1 12 737 3 + 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229920.peg.1880 CDS AZTX01000337.1 3384 817 -3 - 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229920.peg.1881 CDS AZTX01000339.1 81 1859 3 + 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229920.peg.1882 CDS AZTX01000340.1 38 793 2 + 756 Hexuronate utilization operon transcriptional repressor ExuR D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229920.peg.1883 CDS AZTX01000340.1 813 1997 3 + 1185 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229920.peg.1884 CDS AZTX01000341.1 807 94 -3 - 714 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229920.peg.1885 CDS AZTX01000341.1 1118 804 -2 - 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229920.peg.1886 CDS AZTX01000341.1 1226 2008 2 + 783 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229920.peg.1887 CDS AZTX01000341.1 2017 2856 1 + 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229920.peg.1888 CDS AZTX01000341.1 3213 2908 -3 - 306 Phosphoglycerate transport system transcriptional regulatory protein PgtA - none -
fig|6666666.229920.peg.1889 CDS AZTX01000342.1 68 1540 2 + 1473 Immunoglobulin A1 protease / autotransporter domain, T5aSS type secretion Autotransporter proteins;
Autotransporter proteins
fig|6666666.229920.peg.1890 CDS AZTX01000342.1 2026 1604 -1 - 423 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229920.peg.1891 CDS AZTX01000345.1 299 69 -2 - 231 hypothetical protein - none -
fig|6666666.229920.peg.1892 CDS AZTX01000347.1 1507 80 -1 - 1428 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229920.peg.1893 CDS AZTX01000348.1 12 632 3 + 621 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229920.peg.1894 CDS AZTX01000348.1 1074 670 -3 - 405 hypothetical protein - none -
fig|6666666.229920.peg.1895 CDS AZTX01000350.1 71 202 2 + 132 hypothetical protein - none -
fig|6666666.229920.peg.1896 CDS AZTX01000352.1 1400 639 -2 - 762 Flp pilus assembly protein TadD, contains TPR repeat - none -
fig|6666666.229920.peg.1897 CDS AZTX01000353.1 553 2163 1 + 1611 Protein TadG, associated with Flp pilus assembly - none -
fig|6666666.229920.peg.1898 CDS AZTX01000353.1 2587 2459 -1 - 129 hypothetical protein - none -
fig|6666666.229920.peg.1899 CDS AZTX01000356.1 505 59 -1 - 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229920.peg.1900 CDS AZTX01000356.1 652 2436 1 + 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229920.peg.1901 CDS AZTX01000356.1 2579 3109 2 + 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229920.peg.1902 CDS AZTX01000358.1 1247 72 -2 - 1176 hypothetical protein - none -
fig|6666666.229920.peg.1903 CDS AZTX01000359.1 95 1402 2 + 1308 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229920.peg.1904 CDS AZTX01000359.1 1414 1839 1 + 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229920.peg.1905 CDS AZTX01000360.1 75 2432 3 + 2358 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229920.peg.1906 CDS AZTX01000361.1 562 266 -1 - 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229920.peg.1907 CDS AZTX01000361.1 1035 565 -3 - 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229920.peg.1908 CDS AZTX01000361.1 1590 1039 -3 - 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229920.peg.1909 CDS AZTX01000361.1 2354 1596 -2 - 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229920.peg.1910 CDS AZTX01000362.1 1041 61 -3 - 981 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) - none -
fig|6666666.229920.peg.1911 CDS AZTX01000362.1 3265 1064 -1 - 2202 PTS system, galactitol-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.229920.peg.1912 CDS AZTX01000362.1 4209 3280 -3 - 930 Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) Lactose and Galactose Uptake and Utilization
fig|6666666.229920.peg.1913 CDS AZTX01000363.1 664 95 -1 - 570 Lysine decarboxylase family - none -
fig|6666666.229920.peg.1914 CDS AZTX01000363.1 828 2597 3 + 1770 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229920.peg.1915 CDS AZTX01000364.1 17 700 2 + 684 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229920.peg.1916 CDS AZTX01000365.1 84 815 3 + 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229920.peg.1917 CDS AZTX01000365.1 898 1314 1 + 417 Arabinose efflux permease - none -
fig|6666666.229920.peg.1918 CDS AZTX01000366.1 75 203 3 + 129 hypothetical protein - none -
fig|6666666.229920.peg.1919 CDS AZTX01000366.1 2481 208 -3 - 2274 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229920.peg.1920 CDS AZTX01000367.1 76 399 1 + 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229920.peg.1921 CDS AZTX01000368.1 42 176 3 + 135 hypothetical protein - none -
fig|6666666.229920.peg.1922 CDS AZTX01000369.1 328 38 -1 - 291 hypothetical protein - none -
fig|6666666.229920.peg.1923 CDS AZTX01000369.1 894 346 -3 - 549 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229920.peg.1924 CDS AZTX01000370.1 687 481 -3 - 207 Tfp pilus assembly protein, pilus retraction ATPase PilT - none -
fig|6666666.229920.peg.1925 CDS AZTX01000371.1 1514 138 -2 - 1377 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229920.peg.1926 CDS AZTX01000372.1 79 258 1 + 180 FIG050068: DNA-binding protein - none -
fig|6666666.229920.peg.1927 CDS AZTX01000372.1 1459 368 -1 - 1092 Integrase - none -
fig|6666666.229920.peg.1928 CDS AZTX01000373.1 611 12 -2 - 600 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229920.peg.1929 CDS AZTX01000373.1 2092 623 -1 - 1470 Sodium-dependent transporter - none -
fig|6666666.229920.peg.1930 CDS AZTX01000373.1 2202 3089 3 + 888 Transcriptional regulator - none -
fig|6666666.229920.peg.1931 CDS AZTX01000374.1 80 757 2 + 678 YheO-like PAS domain - none -
fig|6666666.229920.peg.1932 CDS AZTX01000374.1 2037 823 -3 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229920.peg.1933 CDS AZTX01000374.1 2474 2199 -2 - 276 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229920.peg.1934 CDS AZTX01000375.1 201 10 -3 - 192 hypothetical protein - none -
fig|6666666.229920.peg.1935 CDS AZTX01000376.1 400 278 -1 - 123 hypothetical protein - none -
fig|6666666.229920.peg.1936 CDS AZTX01000378.1 46 486 1 + 441 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229920.peg.1937 CDS AZTX01000378.1 502 1014 1 + 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229920.peg.1938 CDS AZTX01000378.1 1092 2105 3 + 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229920.peg.1939 CDS AZTX01000378.1 2108 2905 2 + 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229920.peg.1940 CDS AZTX01000379.1 742 272 -1 - 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229920.peg.1941 CDS AZTX01000380.1 26 292 2 + 267 Probable phospholipase protein - none -
fig|6666666.229920.peg.1942 CDS AZTX01000381.1 250 438 1 + 189 hypothetical protein - none -
fig|6666666.229920.peg.1943 CDS AZTX01000383.1 1017 76 -3 - 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229920.peg.1944 CDS AZTX01000386.1 2208 1246 -3 - 963 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229920.peg.1945 CDS AZTX01000387.1 42 368 3 + 327 hypothetical protein - none -
fig|6666666.229920.peg.1946 CDS AZTX01000388.1 1238 123 -2 - 1116 Glycerol-3-phosphate transporter - none -
fig|6666666.229920.peg.1947 CDS AZTX01000389.1 401 270 -2 - 132 hypothetical protein - none -
fig|6666666.229920.peg.1948 CDS AZTX01000390.1 12 365 3 + 354 probable lipoprotein NlpC - none -
fig|6666666.229920.peg.1949 CDS AZTX01000390.1 1014 763 -3 - 252 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229920.peg.1950 CDS AZTX01000390.1 1098 1760 3 + 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229920.peg.1951 CDS AZTX01000390.1 2327 1782 -2 - 546 FIG00696317: hypothetical protein - none -
fig|6666666.229920.peg.1952 CDS AZTX01000391.1 266 745 2 + 480 hypothetical protein - none -
fig|6666666.229920.peg.1953 CDS AZTX01000391.1 867 733 -3 - 135 hypothetical protein - none -
fig|6666666.229920.peg.1954 CDS AZTX01000391.1 1206 1361 3 + 156 hypothetical protein - none -
fig|6666666.229920.peg.1955 CDS AZTX01000393.1 326 1183 2 + 858 Phosphoglycerate transport regulatory protein PgtC - none -
fig|6666666.229920.peg.1956 CDS AZTX01000394.1 135 263 3 + 129 hypothetical protein - none -
fig|6666666.229920.peg.1957 CDS AZTX01000394.1 267 416 3 + 150 hypothetical protein - none -
fig|6666666.229920.peg.1958 CDS AZTX01000397.1 862 467 -1 - 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229920.peg.1959 CDS AZTX01000398.1 879 31 -3 - 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229920.peg.1960 CDS AZTX01000398.1 1137 1349 3 + 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent - none -
fig|6666666.229920.peg.1961 CDS AZTX01000398.1 1412 2104 2 + 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229920.peg.1962 CDS AZTX01000399.1 23 526 2 + 504 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229920.peg.1963 CDS AZTX01000400.1 1762 185 -1 - 1578 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229920.peg.1964 CDS AZTX01000401.1 180 1001 3 + 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229920.peg.1965 CDS AZTX01000401.1 1004 2248 2 + 1245 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) - none -
fig|6666666.229920.peg.1966 CDS AZTX01000401.1 2245 2877 1 + 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229920.peg.1967 CDS AZTX01000401.1 2880 3656 3 + 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229920.peg.1968 CDS AZTX01000401.1 3745 5097 1 + 1353 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229920.peg.1969 CDS AZTX01000402.1 32 430 2 + 399 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229920.peg.1970 CDS AZTX01000403.1 187 1077 1 + 891 transcriptional regulator, putative - none -
fig|6666666.229920.peg.1971 CDS AZTX01000403.1 1218 1502 3 + 285 hypothetical protein - none -
fig|6666666.229920.peg.1972 CDS AZTX01000404.1 264 377 3 + 114 hypothetical protein - none -
fig|6666666.229920.peg.1973 CDS AZTX01000405.1 1689 571 -3 - 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229920.peg.1974 CDS AZTX01000405.1 1759 1884 1 + 126 hypothetical protein - none -
fig|6666666.229920.peg.1975 CDS AZTX01000408.1 96 581 3 + 486 Ferritin-like protein 2 - none -
fig|6666666.229920.peg.1976 CDS AZTX01000411.1 149 436 2 + 288 LSU ribosomal protein L25p Transcription repair cluster
fig|6666666.229920.peg.1977 CDS AZTX01000411.1 585 1187 3 + 603 lipoprotein HlpB - none -
fig|6666666.229920.peg.1978 CDS AZTX01000411.1 1410 2240 3 + 831 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229920.peg.1979 CDS AZTX01000411.1 2420 3748 2 + 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229920.peg.1980 CDS AZTX01000412.1 238 963 1 + 726 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229920.peg.1981 CDS AZTX01000417.1 909 40 -3 - 870 hypothetical protein - none -
fig|6666666.229920.peg.1982 CDS AZTX01000418.1 91 327 1 + 237 FIG00698381: hypothetical protein - none -
fig|6666666.229920.peg.1983 CDS AZTX01000420.1 484 32 -1 - 453 hypothetical protein - none -
fig|6666666.229920.peg.1984 CDS AZTX01000424.1 587 144 -2 - 444 Flavoprotein MioC Flavodoxin
fig|6666666.229920.peg.1985 CDS AZTX01000424.1 862 644 -1 - 219 FIG074102: hypothetical protein - none -
fig|6666666.229920.peg.1986 CDS AZTX01000427.1 713 165 -2 - 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229920.peg.1987 CDS AZTX01000427.1 785 1825 2 + 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229920.peg.1988 CDS AZTX01000429.1 736 392 -1 - 345 Programmed cell death toxin MazF - none -
fig|6666666.229920.peg.1989 CDS AZTX01000429.1 1743 1564 -3 - 180 hypothetical protein - none -
fig|6666666.229920.peg.1990 CDS AZTX01000429.1 2236 2057 -1 - 180 Haemophilus-specific protein, uncharacterized - none -
fig|6666666.229920.peg.1991 CDS AZTX01000430.1 1705 356 -1 - 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229920.peg.1992 CDS AZTX01000431.1 730 68 -1 - 663 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229920.peg.1993 CDS AZTX01000433.1 176 18 -2 - 159 hypothetical protein - none -
fig|6666666.229920.peg.1994 CDS AZTX01000433.1 226 375 1 + 150 hypothetical protein - none -
fig|6666666.229920.peg.1995 CDS AZTX01000434.1 33 203 3 + 171 hypothetical protein - none -
fig|6666666.229920.peg.1996 CDS AZTX01000434.1 684 265 -3 - 420 Ferritin-like protein 2 - none -
fig|6666666.229920.peg.1997 CDS AZTX01000437.1 181 444 1 + 264 Phage tail fibers Phage tail fiber proteins
fig|6666666.229920.peg.1998 CDS AZTX01000440.1 29 712 2 + 684 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229920.peg.1999 CDS AZTX01000440.1 788 1126 2 + 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229920.peg.2000 CDS AZTX01000447.1 273 611 3 + 339 conserved hypothetical protein - none -
fig|6666666.229920.peg.2001 CDS AZTX01000447.1 963 673 -3 - 291 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.2002 CDS AZTX01000447.1 1207 953 -1 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229920.peg.2003 CDS AZTX01000449.1 838 50 -1 - 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229920.peg.2004 CDS AZTX01000450.1 190 615 1 + 426 Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229920.peg.2005 CDS AZTX01000450.1 576 1250 3 + 675 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229920.peg.2006 CDS AZTX01000453.1 588 433 -3 - 156 hypothetical protein - none -
fig|6666666.229920.peg.2007 CDS AZTX01000458.1 256 128 -1 - 129 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System
fig|6666666.229920.peg.2008 CDS AZTX01000458.1 701 222 -2 - 480 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System
fig|6666666.229920.peg.2009 CDS AZTX01000460.1 611 282 -2 - 330 ImpA - none -
fig|6666666.229920.peg.2010 CDS AZTX01000461.1 27 533 3 + 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229920.peg.2011 CDS AZTX01000461.1 700 864 1 + 165 hypothetical protein - none -
fig|6666666.229920.peg.2012 CDS AZTX01000462.1 274 1017 1 + 744 Putative membrane protein YeiH - none -
fig|6666666.229920.peg.2013 CDS AZTX01000467.1 1953 424 -3 - 1530 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229920.peg.2014 CDS AZTX01000468.1 32 304 2 + 273 hypothetical protein - none -
fig|6666666.229920.peg.2015 CDS AZTX01000469.1 349 62 -1 - 288 hypothetical protein - none -
fig|6666666.229920.peg.2016 CDS AZTX01000471.1 126 392 3 + 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent - none -
fig|6666666.229920.peg.2017 CDS AZTX01000471.1 402 542 3 + 141 LSU ribosomal protein L36p - none -
fig|6666666.229920.peg.2018 CDS AZTX01000473.1 240 121 -3 - 120 hypothetical protein - none -
fig|6666666.229920.peg.2019 CDS AZTX01000475.1 1069 230 -1 - 840 hypothetical protein - none -
fig|6666666.229920.peg.2020 CDS AZTX01000478.1 163 504 1 + 342 FIG002060: uncharacterized protein YggL - none -
fig|6666666.229920.peg.2021 CDS AZTX01000483.1 250 41 -1 - 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229920.peg.2022 CDS AZTX01000488.1 162 1349 3 + 1188 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229920.peg.2023 CDS AZTX01000490.1 180 4 -3 - 177 Type IV prepilin peptidase TadV/CpaA - none -
fig|6666666.229920.peg.2024 CDS AZTX01000491.1 643 272 -1 - 372 hypothetical protein - none -
fig|6666666.229920.peg.2025 CDS AZTX01000495.1 697 485 -1 - 213 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229920.peg.2026 CDS AZTX01000499.1 64 177 1 + 114 hypothetical protein - none -
fig|6666666.229920.peg.2027 CDS AZTX01000503.1 268 381 1 + 114 hypothetical protein - none -
fig|6666666.229920.peg.2028 CDS AZTX01000504.1 744 226 -3 - 519 hypothetical protein - none -
fig|6666666.229920.peg.2029 CDS AZTX01000505.1 1118 3 -2 - 1116 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229920.peg.2030 CDS AZTX01000508.1 264 428 3 + 165 hypothetical protein - none -
fig|6666666.229920.rna.1 RNA AZTX01000013.1 10419 10347 -3 - 73 tRNA-Ala-GGC - none -
fig|6666666.229920.rna.2 RNA AZTX01000027.1 6467 6557 2 + 91 tRNA-Ser-GCT - none -
fig|6666666.229920.rna.3 RNA AZTX01000027.1 6578 6651 2 + 74 tRNA-Arg-ACG - none -
fig|6666666.229920.rna.4 RNA AZTX01000027.1 6709 6782 1 + 74 tRNA-Arg-ACG - none -
fig|6666666.229920.rna.5 RNA AZTX01000036.1 3517 3600 1 + 84 tRNA-Leu-CAG - none -
fig|6666666.229920.rna.6 RNA AZTX01000037.1 1 1901 1 + 1901 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229920.rna.7 RNA AZTX01000037.1 1 2024 1 + 2024 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229920.rna.8 RNA AZTX01000037.1 2272 2387 1 + 116 5S RNA - none -
fig|6666666.229920.rna.9 RNA AZTX01000040.1 6541 6631 1 + 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229920.rna.10 RNA AZTX01000049.1 15574 15656 1 + 83 tRNA-Leu-GAG - none -
fig|6666666.229920.rna.11 RNA AZTX01000069.1 60 1 -3 - 60 tRNA-Pseudo-GCC - none -
fig|6666666.229920.rna.12 RNA AZTX01000072.1 20403 20476 3 + 74 tRNA-Met-CAT - none -
fig|6666666.229920.rna.13 RNA AZTX01000073.1 1344 52 -3 - 1293 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229920.rna.14 RNA AZTX01000104.1 77 5 -2 - 73 tRNA-Asn-GTT - none -
fig|6666666.229920.rna.15 RNA AZTX01000104.1 157 85 -1 - 73 tRNA-Phe-GAA - none -
fig|6666666.229920.rna.16 RNA AZTX01000116.1 8201 8273 2 + 73 tRNA-Lys-TTT - none -
fig|6666666.229920.rna.17 RNA AZTX01000116.1 8310 8369 3 + 60 tRNA-Lys-TTT - none -
fig|6666666.229920.rna.18 RNA AZTX01000122.1 10619 10546 -2 - 74 tRNA-Lys-CTT - none -
fig|6666666.229920.rna.19 RNA AZTX01000137.1 58 1 -1 - 58 tRNA-Asp-GTC - none -
fig|6666666.229920.rna.20 RNA AZTX01000141.1 1960 2046 1 + 87 tRNA-Ser-GGA - none -
fig|6666666.229920.rna.21 RNA AZTX01000153.1 566 495 -2 - 72 tRNA-Gln-TTG - none -
fig|6666666.229920.rna.22 RNA AZTX01000153.1 678 607 -3 - 72 tRNA-Gln-TTG - none -
fig|6666666.229920.rna.23 RNA AZTX01000153.1 792 711 -3 - 82 tRNA-Leu-TAG - none -
fig|6666666.229920.rna.24 RNA AZTX01000153.1 874 801 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.229920.rna.25 RNA AZTX01000223.1 236 164 -2 - 73 tRNA-Thr-GGT - none -
fig|6666666.229920.rna.26 RNA AZTX01000223.1 314 243 -2 - 72 tRNA-Gly-TCC - none -
fig|6666666.229920.rna.27 RNA AZTX01000223.1 439 358 -1 - 82 tRNA-Tyr-GTA - none -
fig|6666666.229920.rna.28 RNA AZTX01000223.1 545 473 -2 - 73 tRNA-Thr-TGT - none -
fig|6666666.229920.rna.29 RNA AZTX01000225.1 189 1157 3 + 969 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229920.rna.30 RNA AZTX01000233.1 1618 1545 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.229920.rna.31 RNA AZTX01000285.1 812 726 -2 - 87 tRNA-Ser-TGA - none -
fig|6666666.229920.rna.32 RNA AZTX01000333.1 97 170 1 + 74 tRNA-Ile-GAT - none -
fig|6666666.229920.rna.33 RNA AZTX01000333.1 223 295 1 + 73 tRNA-Ala-TGC - none -
fig|6666666.229920.rna.34 RNA AZTX01000356.1 3293 3366 2 + 74 tRNA-Val-GAC - none -
fig|6666666.229920.rna.35 RNA AZTX01000370.1 217 289 1 + 73 tRNA-Gly-GCC - none -
fig|6666666.229920.rna.36 RNA AZTX01000370.1 301 371 1 + 71 tRNA-Cys-GCA - none -
fig|6666666.229920.rna.37 RNA AZTX01000372.1 1702 1620 -1 - 83 tRNA-Leu-CAA - none -
fig|6666666.229920.rna.38 RNA AZTX01000406.1 108 181 3 + 74 tRNA-Arg-CCG - none -
fig|6666666.229920.rna.39 RNA AZTX01000406.1 216 288 3 + 73 tRNA-His-GTG - none -
fig|6666666.229920.rna.40 RNA AZTX01000425.1 545 618 2 + 74 tRNA-Met-CAT - none -
fig|6666666.229920.rna.41 RNA AZTX01000427.1 60 1 -3 - 60 tRNA-Pseudo-GCC - none -
fig|6666666.229920.rna.42 RNA AZTX01000428.1 58 1 -1 - 58 tRNA-Asp-GTC - none -
fig|6666666.229920.rna.43 RNA AZTX01000428.1 191 72 -2 - 120 5S RNA - none -
fig|6666666.229920.rna.44 RNA AZTX01000452.1 131 61 -2 - 71 tRNA-Pseudo-AAC - none -