fig|6666666.229923.peg.1 CDS AZTQ01000001.1 1189 236 -1 - 954 Glycosyltransferase - none -
fig|6666666.229923.peg.2 CDS AZTQ01000001.1 2222 1332 -2 - 891 hypothetical protein - none -
fig|6666666.229923.peg.3 CDS AZTQ01000001.1 4270 2225 -1 - 2046 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229923.peg.4 CDS AZTQ01000001.1 4914 4303 -3 - 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229923.peg.5 CDS AZTQ01000001.1 5892 4936 -3 - 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229923.peg.6 CDS AZTQ01000001.1 6983 6216 -2 - 768 Putative membrane protein YfcA - none -
fig|6666666.229923.peg.7 CDS AZTQ01000001.1 7859 6987 -2 - 873 Murein endopeptidase - none -
fig|6666666.229923.peg.8 CDS AZTQ01000001.1 8954 7881 -2 - 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229923.peg.9 CDS AZTQ01000001.1 12298 8975 -1 - 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229923.peg.10 CDS AZTQ01000001.1 13722 12307 -3 - 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229923.peg.11 CDS AZTQ01000001.1 14345 13728 -2 - 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229923.peg.12 CDS AZTQ01000001.1 14432 15232 2 + 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229923.peg.13 CDS AZTQ01000001.1 15649 16173 1 + 525 Flavodoxin 1 Flavodoxin
fig|6666666.229923.peg.14 CDS AZTQ01000001.1 16192 16632 1 + 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229923.peg.15 CDS AZTQ01000001.1 16800 19472 3 + 2673 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229923.peg.16 CDS AZTQ01000001.1 19540 19890 1 + 351 FIG00782386: hypothetical protein - none -
fig|6666666.229923.peg.17 CDS AZTQ01000001.1 20243 19926 -2 - 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229923.peg.18 CDS AZTQ01000001.1 20941 20249 -1 - 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229923.peg.19 CDS AZTQ01000001.1 22105 20981 -1 - 1125 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229923.peg.20 CDS AZTQ01000001.1 22455 22159 -3 - 297 Inner membrane protein yciS - none -
fig|6666666.229923.peg.21 CDS AZTQ01000001.1 22843 22556 -1 - 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229923.peg.22 CDS AZTQ01000001.1 24551 22905 -2 - 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229923.peg.23 CDS AZTQ01000001.1 25329 24649 -3 - 681 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229923.peg.24 CDS AZTQ01000001.1 26216 25326 -2 - 891 Membrane protein LAPB - none -
fig|6666666.229923.peg.25 CDS AZTQ01000001.1 26508 28874 3 + 2367 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229923.peg.26 CDS AZTQ01000001.1 28936 31728 1 + 2793 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229923.peg.27 CDS AZTQ01000001.1 32127 31795 -3 - 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229923.peg.28 CDS AZTQ01000001.1 32784 32128 -3 - 657 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229923.peg.29 CDS AZTQ01000001.1 33793 32861 -1 - 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229923.peg.30 CDS AZTQ01000001.1 33921 33790 -3 - 132 hypothetical protein - none -
fig|6666666.229923.peg.31 CDS AZTQ01000001.1 34083 36356 3 + 2274 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229923.peg.32 CDS AZTQ01000001.1 38018 37428 -2 - 591 O-methyltransferase - none -
fig|6666666.229923.peg.33 CDS AZTQ01000001.1 38977 38111 -1 - 867 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229923.peg.34 CDS AZTQ01000001.1 40768 38990 -1 - 1779 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229923.peg.35 CDS AZTQ01000001.1 41439 40765 -3 - 675 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229923.peg.36 CDS AZTQ01000001.1 44268 41554 -3 - 2715 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229923.peg.37 CDS AZTQ01000001.1 46176 44440 -3 - 1737 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229923.peg.38 CDS AZTQ01000001.1 47386 46214 -1 - 1173 hypothetical protein - none -
fig|6666666.229923.peg.39 CDS AZTQ01000001.1 47571 47395 -3 - 177 hypothetical protein - none -
fig|6666666.229923.peg.40 CDS AZTQ01000001.1 49337 48327 -2 - 1011 hypothetical protein - none -
fig|6666666.229923.peg.41 CDS AZTQ01000001.1 50692 49337 -1 - 1356 Superfamily II DNA/RNA helicases, SNF2 family - none -
fig|6666666.229923.peg.42 CDS AZTQ01000001.1 52222 50789 -1 - 1434 helicase (Snf2/Rad54 family) - none -
fig|6666666.229923.peg.43 CDS AZTQ01000001.1 52594 52316 -1 - 279 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229923.peg.44 CDS AZTQ01000001.1 52949 53710 2 + 762 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229923.peg.45 CDS AZTQ01000001.1 53797 54126 1 + 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) CBSS-326442.4.peg.1852;
Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229923.peg.46 CDS AZTQ01000001.1 54223 55104 1 + 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229923.peg.47 CDS AZTQ01000001.1 55266 55994 3 + 729 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229923.peg.48 CDS AZTQ01000001.1 55994 56851 2 + 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229923.peg.49 CDS AZTQ01000001.1 56848 57696 1 + 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229923.peg.50 CDS AZTQ01000001.1 57943 57671 -1 - 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229923.peg.51 CDS AZTQ01000001.1 58088 58768 2 + 681 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229923.peg.52 CDS AZTQ01000001.1 58831 59289 1 + 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229923.peg.53 CDS AZTQ01000001.1 59289 59762 3 + 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229923.peg.54 CDS AZTQ01000001.1 59771 61912 2 + 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229923.peg.55 CDS AZTQ01000001.1 62415 61909 -3 - 507 FIG001674: hypothetical protein - none -
fig|6666666.229923.peg.56 CDS AZTQ01000001.1 62478 63428 3 + 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p YrdC-YciO-Sua5 protein family
fig|6666666.229923.peg.57 CDS AZTQ01000001.1 64541 63597 -2 - 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229923.peg.58 CDS AZTQ01000001.1 65355 64531 -3 - 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229923.peg.59 CDS AZTQ01000001.1 66586 65366 -1 - 1221 FIG00732228: membrane protein - none -
fig|6666666.229923.peg.60 CDS AZTQ01000002.1 32 307 2 + 276 DsrE-related protein - none -
fig|6666666.229923.peg.61 CDS AZTQ01000002.1 377 4045 2 + 3669 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229923.peg.62 CDS AZTQ01000002.1 4045 6024 1 + 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229923.peg.63 CDS AZTQ01000002.1 6037 6633 1 + 597 hypothetical protein - none -
fig|6666666.229923.peg.64 CDS AZTQ01000002.1 6875 7303 2 + 429 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.229923.peg.65 CDS AZTQ01000002.1 7320 7712 3 + 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229923.peg.66 CDS AZTQ01000002.1 7862 8647 2 + 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229923.peg.67 CDS AZTQ01000002.1 8952 8668 -3 - 285 StbE replicon stabilization toxin - none -
fig|6666666.229923.peg.68 CDS AZTQ01000002.1 9203 8949 -2 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229923.peg.69 CDS AZTQ01000002.1 10795 9338 -1 - 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229923.peg.70 CDS AZTQ01000002.1 11019 10849 -3 - 171 hypothetical protein - none -
fig|6666666.229923.peg.71 CDS AZTQ01000002.1 11021 11800 2 + 780 Protein of unknown function DUF419 - none -
fig|6666666.229923.peg.72 CDS AZTQ01000002.1 12109 11933 -1 - 177 hypothetical protein - none -
fig|6666666.229923.peg.73 CDS AZTQ01000002.1 14591 12102 -2 - 2490 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229923.peg.74 CDS AZTQ01000002.1 15752 14652 -2 - 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229923.peg.75 CDS AZTQ01000002.1 16058 17515 2 + 1458 Thiamine biosynthesis protein thiI - none -
fig|6666666.229923.peg.76 CDS AZTQ01000002.1 17807 18799 2 + 993 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229923.peg.77 CDS AZTQ01000002.1 19832 18864 -2 - 969 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229923.peg.78 CDS AZTQ01000002.1 20192 21205 2 + 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229923.peg.79 CDS AZTQ01000002.1 21300 21740 3 + 441 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229923.peg.80 CDS AZTQ01000002.1 21740 21985 2 + 246 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229923.peg.81 CDS AZTQ01000002.1 21986 22441 2 + 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229923.peg.82 CDS AZTQ01000002.1 22642 23283 1 + 642 Stringent starvation protein A Carbon Starvation
fig|6666666.229923.peg.83 CDS AZTQ01000002.1 23295 23756 3 + 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229923.peg.84 CDS AZTQ01000002.1 23757 23888 3 + 132 hypothetical protein - none -
fig|6666666.229923.peg.85 CDS AZTQ01000002.1 25320 23917 -3 - 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.229923.peg.86 CDS AZTQ01000002.1 25516 26745 1 + 1230 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229923.peg.87 CDS AZTQ01000002.1 26822 27550 2 + 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis Experimental
fig|6666666.229923.peg.88 CDS AZTQ01000002.1 29210 27636 -2 - 1575 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229923.peg.89 CDS AZTQ01000002.1 30224 29259 -2 - 966 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229923.peg.90 CDS AZTQ01000002.1 30470 31909 2 + 1440 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229923.peg.91 CDS AZTQ01000002.1 31997 33028 2 + 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229923.peg.92 CDS AZTQ01000002.1 33042 34046 3 + 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229923.peg.93 CDS AZTQ01000002.1 34071 35087 3 + 1017 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229923.peg.94 CDS AZTQ01000002.1 35111 35989 2 + 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229923.peg.95 CDS AZTQ01000002.1 36022 36324 1 + 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229923.peg.96 CDS AZTQ01000002.1 37837 36431 -1 - 1407 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229923.peg.97 CDS AZTQ01000002.1 39111 38122 -3 - 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229923.peg.98 CDS AZTQ01000002.1 41056 39371 -1 - 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229923.peg.99 CDS AZTQ01000002.1 42139 41333 -1 - 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229923.peg.100 CDS AZTQ01000002.1 43335 42136 -3 - 1200 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229923.peg.101 CDS AZTQ01000002.1 44112 43345 -3 - 768 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229923.peg.102 CDS AZTQ01000002.1 44138 44269 2 + 132 hypothetical protein - none -
fig|6666666.229923.peg.103 CDS AZTQ01000002.1 44518 45102 1 + 585 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229923.peg.104 CDS AZTQ01000002.1 45255 46886 3 + 1632 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229923.peg.105 CDS AZTQ01000002.1 47597 47481 -2 - 117 hypothetical protein - none -
fig|6666666.229923.peg.106 CDS AZTQ01000002.1 48882 47578 -3 - 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229923.peg.107 CDS AZTQ01000002.1 50173 48893 -1 - 1281 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229923.peg.108 CDS AZTQ01000002.1 50689 50219 -1 - 471 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229923.peg.109 CDS AZTQ01000002.1 50970 50704 -3 - 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229923.peg.110 CDS AZTQ01000002.1 51123 51004 -3 - 120 hypothetical protein - none -
fig|6666666.229923.peg.111 CDS AZTQ01000004.1 823 1737 1 + 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229923.peg.112 CDS AZTQ01000004.1 4214 1794 -2 - 2421 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229923.peg.113 CDS AZTQ01000004.1 6200 4311 -2 - 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229923.peg.114 CDS AZTQ01000004.1 6508 6200 -1 - 309 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229923.peg.115 CDS AZTQ01000004.1 6631 6750 1 + 120 hypothetical protein - none -
fig|6666666.229923.peg.116 CDS AZTQ01000004.1 6768 8018 3 + 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229923.peg.117 CDS AZTQ01000004.1 8675 8070 -2 - 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229923.peg.118 CDS AZTQ01000005.1 444 58 -3 - 387 Hydrogenase maturation protease (EC 3.4.24.-) - none -
fig|6666666.229923.peg.119 CDS AZTQ01000005.1 2153 444 -2 - 1710 Uptake hydrogenase large subunit (EC 1.12.99.6) Hydrogenases
fig|6666666.229923.peg.120 CDS AZTQ01000005.1 3379 2153 -1 - 1227 Ni/Fe-hydrogenase 2 B-type cytochrome subunit Hydrogenases
fig|6666666.229923.peg.121 CDS AZTQ01000005.1 4412 3372 -2 - 1041 Fe-S-cluster-containing hydrogenase components 1 Anaerobic respiratory reductases;
Hydrogenases
fig|6666666.229923.peg.122 CDS AZTQ01000005.1 5562 4414 -3 - 1149 Uptake hydrogenase small subunit precursor (EC 1.12.99.6) Hydrogenases
fig|6666666.229923.peg.123 CDS AZTQ01000005.1 7282 5852 -1 - 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229923.peg.124 CDS AZTQ01000005.1 7569 7291 -3 - 279 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229923.peg.125 CDS AZTQ01000005.1 7857 7579 -3 - 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229923.peg.126 CDS AZTQ01000005.1 8951 7953 -2 - 999 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229923.peg.127 CDS AZTQ01000005.1 9355 8963 -1 - 393 putative - none -
fig|6666666.229923.peg.128 CDS AZTQ01000005.1 10059 9472 -3 - 588 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229923.peg.129 CDS AZTQ01000005.1 11617 10070 -1 - 1548 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229923.peg.130 CDS AZTQ01000005.1 11823 11701 -3 - 123 hypothetical protein - none -
fig|6666666.229923.peg.131 CDS AZTQ01000005.1 12419 11865 -2 - 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) KDO2-Lipid A biosynthesis
fig|6666666.229923.peg.132 CDS AZTQ01000005.1 13354 12419 -1 - 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) KDO2-Lipid A biosynthesis
fig|6666666.229923.peg.133 CDS AZTQ01000005.1 14319 14167 -3 - 153 hypothetical protein - none -
fig|6666666.229923.peg.134 CDS AZTQ01000005.1 14356 15231 1 + 876 Probable protease htpX homolog - none -
fig|6666666.229923.peg.135 CDS AZTQ01000005.1 15492 16481 3 + 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229923.peg.136 CDS AZTQ01000005.1 16501 18891 1 + 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229923.peg.137 CDS AZTQ01000005.1 18895 19191 1 + 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229923.peg.138 CDS AZTQ01000005.1 19244 19732 2 + 489 Probable lipoprotein nlpC precursor - none -
fig|6666666.229923.peg.139 CDS AZTQ01000005.1 20792 19827 -2 - 966 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Bacteria
fig|6666666.229923.peg.140 CDS AZTQ01000005.1 20933 21349 2 + 417 putative membrane protein - none -
fig|6666666.229923.peg.141 CDS AZTQ01000005.1 21983 21438 -2 - 546 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229923.peg.142 CDS AZTQ01000005.1 23450 21996 -2 - 1455 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229923.peg.143 CDS AZTQ01000005.1 23949 23452 -3 - 498 FIG00697418: hypothetical protein - none -
fig|6666666.229923.peg.144 CDS AZTQ01000005.1 24156 25163 3 + 1008 ABC transporter, solute-binding protein - none -
fig|6666666.229923.peg.145 CDS AZTQ01000005.1 25163 25378 2 + 216 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229923.peg.146 CDS AZTQ01000005.1 25384 26175 1 + 792 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229923.peg.147 CDS AZTQ01000005.1 26172 26921 3 + 750 ABC transporter ATP-binding protein - none -
fig|6666666.229923.peg.148 CDS AZTQ01000005.1 27014 27610 2 + 597 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229923.peg.149 CDS AZTQ01000005.1 27607 29400 1 + 1794 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229923.peg.150 CDS AZTQ01000005.1 29741 29532 -2 - 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229923.peg.151 CDS AZTQ01000005.1 30858 29824 -3 - 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229923.peg.152 CDS AZTQ01000005.1 31662 30871 -3 - 792 Glutathione synthetase (EC 6.3.2.3) Cluster containing Glutathione synthetase;
Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229923.peg.153 CDS AZTQ01000005.1 32648 31662 -2 - 987 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229923.peg.154 CDS AZTQ01000005.1 34237 32822 -1 - 1416 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229923.peg.155 CDS AZTQ01000005.1 35384 34257 -2 - 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229923.peg.156 CDS AZTQ01000005.1 38115 35386 -3 - 2730 ABC-type multidrug transport system, permease component - none -
fig|6666666.229923.peg.157 CDS AZTQ01000005.1 39098 38118 -2 - 981 HlyD family secretion protein - none -
fig|6666666.229923.peg.158 CDS AZTQ01000006.1 14 1162 2 + 1149 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229923.peg.159 CDS AZTQ01000006.1 1274 2251 2 + 978 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229923.peg.160 CDS AZTQ01000006.1 2244 2372 3 + 129 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229923.peg.161 CDS AZTQ01000006.1 2383 3714 1 + 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229923.peg.162 CDS AZTQ01000006.1 3825 3676 -3 - 150 hypothetical protein - none -
fig|6666666.229923.peg.163 CDS AZTQ01000007.1 1068 28 -3 - 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229923.peg.164 CDS AZTQ01000007.1 1568 4606 2 + 3039 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229923.peg.165 CDS AZTQ01000007.1 4616 5038 2 + 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229923.peg.166 CDS AZTQ01000007.1 5031 6086 3 + 1056 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229923.peg.167 CDS AZTQ01000007.1 6128 6628 2 + 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229923.peg.168 CDS AZTQ01000007.1 6806 6666 -2 - 141 hypothetical protein - none -
fig|6666666.229923.peg.169 CDS AZTQ01000007.1 8295 7174 -3 - 1122 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229923.peg.170 CDS AZTQ01000007.1 9186 8383 -3 - 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229923.peg.171 CDS AZTQ01000007.1 10171 9293 -1 - 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229923.peg.172 CDS AZTQ01000007.1 11050 10181 -1 - 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229923.peg.173 CDS AZTQ01000007.1 11944 11060 -1 - 885 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229923.peg.174 CDS AZTQ01000007.1 12660 11959 -3 - 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229923.peg.175 CDS AZTQ01000007.1 12902 13888 2 + 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229923.peg.176 CDS AZTQ01000007.1 13952 15802 2 + 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229923.peg.177 CDS AZTQ01000007.1 15938 17068 2 + 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229923.peg.178 CDS AZTQ01000007.1 17316 18782 3 + 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229923.peg.179 CDS AZTQ01000007.1 19010 19165 2 + 156 hypothetical protein - none -
fig|6666666.229923.peg.180 CDS AZTQ01000007.1 21067 20063 -1 - 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis Experimental
fig|6666666.229923.peg.181 CDS AZTQ01000007.1 21373 21083 -1 - 291 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229923.peg.182 CDS AZTQ01000007.1 21678 21370 -3 - 309 FIG022160: hypothetical toxin - none -
fig|6666666.229923.peg.183 CDS AZTQ01000007.1 22393 21758 -1 - 636 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229923.peg.184 CDS AZTQ01000007.1 24005 22377 -2 - 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229923.peg.185 CDS AZTQ01000007.1 25018 24014 -1 - 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229923.peg.186 CDS AZTQ01000007.1 26372 26079 -2 - 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229923.peg.187 CDS AZTQ01000007.1 27389 26376 -2 - 1014 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229923.peg.188 CDS AZTQ01000007.1 28556 27765 -2 - 792 hypothetical protein - none -
fig|6666666.229923.peg.189 CDS AZTQ01000007.1 29160 28900 -3 - 261 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229923.peg.190 CDS AZTQ01000007.1 29840 29157 -2 - 684 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229923.peg.191 CDS AZTQ01000007.1 32568 30070 -3 - 2499 CRISPR-associated protein Cas3@1@1 CRISPRs
fig|6666666.229923.peg.192 CDS AZTQ01000007.1 32991 35924 3 + 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229923.peg.193 CDS AZTQ01000007.1 36007 36285 1 + 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229923.peg.194 CDS AZTQ01000007.1 36295 36594 1 + 300 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229923.peg.195 CDS AZTQ01000007.1 38253 36670 -3 - 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229923.peg.196 CDS AZTQ01000007.1 38400 38513 3 + 114 hypothetical protein - none -
fig|6666666.229923.peg.197 CDS AZTQ01000008.1 1747 734 -1 - 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.198 CDS AZTQ01000008.1 2347 1835 -1 - 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229923.peg.199 CDS AZTQ01000008.1 2785 2363 -1 - 423 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229923.peg.200 CDS AZTQ01000008.1 3130 4452 1 + 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229923.peg.201 CDS AZTQ01000008.1 4622 6370 2 + 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229923.peg.202 CDS AZTQ01000008.1 6387 8021 3 + 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229923.peg.203 CDS AZTQ01000008.1 8752 8132 -1 - 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229923.peg.204 CDS AZTQ01000008.1 9663 8764 -3 - 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229923.peg.205 CDS AZTQ01000008.1 9822 10550 3 + 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229923.peg.206 CDS AZTQ01000008.1 10831 10610 -1 - 222 Protein SlyX - none -
fig|6666666.229923.peg.207 CDS AZTQ01000008.1 10920 11645 3 + 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229923.peg.208 CDS AZTQ01000008.1 11725 12393 1 + 669 YheO-like PAS domain - none -
fig|6666666.229923.peg.209 CDS AZTQ01000008.1 12397 12774 1 + 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229923.peg.210 CDS AZTQ01000008.1 12771 13133 3 + 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229923.peg.211 CDS AZTQ01000008.1 13136 13423 2 + 288 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229923.peg.212 CDS AZTQ01000008.1 14199 13432 -3 - 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229923.peg.213 CDS AZTQ01000008.1 14847 14209 -3 - 639 ABC-type amino acid transport system, permease component - none -
fig|6666666.229923.peg.214 CDS AZTQ01000008.1 15691 14915 -1 - 777 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229923.peg.215 CDS AZTQ01000008.1 17112 15817 -3 - 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229923.peg.216 CDS AZTQ01000008.1 18602 17238 -2 - 1365 lipoprotein, putative - none -
fig|6666666.229923.peg.217 CDS AZTQ01000008.1 19595 18747 -2 - 849 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229923.peg.218 CDS AZTQ01000008.1 20787 19657 -3 - 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229923.peg.219 CDS AZTQ01000008.1 20873 22243 2 + 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229923.peg.220 CDS AZTQ01000008.1 22766 22413 -2 - 354 Putative exported protein precursor - none -
fig|6666666.229923.peg.221 CDS AZTQ01000008.1 23505 22786 -3 - 720 Putative exported protein precursor - none -
fig|6666666.229923.peg.222 CDS AZTQ01000009.1 495 1883 3 + 1389 FOG: TPR repeat - none -
fig|6666666.229923.peg.223 CDS AZTQ01000009.1 1907 2179 2 + 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229923.peg.224 CDS AZTQ01000009.1 2176 3612 1 + 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229923.peg.225 CDS AZTQ01000009.1 3622 4173 1 + 552 Protein involved in cell division - none -
fig|6666666.229923.peg.226 CDS AZTQ01000009.1 4186 5070 1 + 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229923.peg.227 CDS AZTQ01000009.1 5315 6355 2 + 1041 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229923.peg.228 CDS AZTQ01000009.1 6360 6659 3 + 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229923.peg.229 CDS AZTQ01000009.1 7039 6791 -1 - 249 Uncharacterized protein HI0966 - none -
fig|6666666.229923.peg.230 CDS AZTQ01000009.1 7817 7494 -2 - 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229923.peg.231 CDS AZTQ01000009.1 9419 8046 -2 - 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229923.peg.232 CDS AZTQ01000009.1 10087 9815 -1 - 273 FIG00904058: hypothetical protein - none -
fig|6666666.229923.peg.233 CDS AZTQ01000009.1 10299 10087 -3 - 213 FIG003276: zinc-binding protein - none -
fig|6666666.229923.peg.234 CDS AZTQ01000009.1 10912 10289 -1 - 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229923.peg.235 CDS AZTQ01000009.1 11651 10962 -2 - 690 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229923.peg.236 CDS AZTQ01000009.1 12871 11648 -1 - 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229923.peg.237 CDS AZTQ01000009.1 14273 12864 -2 - 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229923.peg.238 CDS AZTQ01000009.1 14752 14300 -1 - 453 Type IV pilin PilA Type IV pilus
fig|6666666.229923.peg.239 CDS AZTQ01000009.1 14802 15428 3 + 627 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229923.peg.240 CDS AZTQ01000009.1 16373 15903 -2 - 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229923.peg.241 CDS AZTQ01000009.1 16565 18802 2 + 2238 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229923.peg.242 CDS AZTQ01000009.1 18881 19783 2 + 903 Lipoprotein nlpI precursor - none -
fig|6666666.229923.peg.243 CDS AZTQ01000009.1 19919 21697 2 + 1779 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229923.peg.244 CDS AZTQ01000009.1 22315 21776 -1 - 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229923.peg.245 CDS AZTQ01000009.1 23915 22554 -2 - 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229923.peg.246 CDS AZTQ01000009.1 23987 24565 2 + 579 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229923.peg.247 CDS AZTQ01000009.1 25253 24753 -2 - 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229923.peg.248 CDS AZTQ01000009.1 26188 25304 -1 - 885 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229923.peg.249 CDS AZTQ01000009.1 26294 26178 -2 - 117 hypothetical protein - none -
fig|6666666.229923.peg.250 CDS AZTQ01000009.1 26379 27095 3 + 717 COG1720: Uncharacterized conserved protein tRNA modification Bacteria
fig|6666666.229923.peg.251 CDS AZTQ01000009.1 29853 27151 -3 - 2703 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.252 CDS AZTQ01000009.1 29794 29955 1 + 162 hypothetical protein - none -
fig|6666666.229923.peg.253 CDS AZTQ01000009.1 30835 30212 -1 - 624 FIG00696313: hypothetical protein - none -
fig|6666666.229923.peg.254 CDS AZTQ01000009.1 31060 31209 1 + 150 hypothetical protein - none -
fig|6666666.229923.peg.255 CDS AZTQ01000009.1 31694 31251 -2 - 444 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.256 CDS AZTQ01000009.1 33651 32122 -3 - 1530 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.257 CDS AZTQ01000009.1 34328 33942 -2 - 387 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229923.peg.258 CDS AZTQ01000009.1 34423 34635 1 + 213 Copper chaperone Copper homeostasis
fig|6666666.229923.peg.259 CDS AZTQ01000009.1 34724 36883 2 + 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229923.peg.260 CDS AZTQ01000009.1 36956 37801 2 + 846 membrane protein, putative - none -
fig|6666666.229923.peg.261 CDS AZTQ01000009.1 37918 38268 1 + 351 Phage-related protein - none -
fig|6666666.229923.peg.262 CDS AZTQ01000009.1 38261 38584 2 + 324 FIG074102: hypothetical protein - none -
fig|6666666.229923.peg.263 CDS AZTQ01000009.1 39888 38644 -3 - 1245 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229923.peg.264 CDS AZTQ01000009.1 40464 39898 -3 - 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229923.peg.265 CDS AZTQ01000009.1 40613 40759 2 + 147 hypothetical protein - none -
fig|6666666.229923.peg.266 CDS AZTQ01000009.1 42324 40723 -3 - 1602 Dca - none -
fig|6666666.229923.peg.267 CDS AZTQ01000009.1 42649 42533 -1 - 117 hypothetical protein - none -
fig|6666666.229923.peg.268 CDS AZTQ01000009.1 42644 44830 2 + 2187 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229923.peg.269 CDS AZTQ01000009.1 44964 46811 3 + 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229923.peg.270 CDS AZTQ01000009.1 46948 47574 1 + 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229923.peg.271 CDS AZTQ01000009.1 47698 48951 1 + 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229923.peg.272 CDS AZTQ01000009.1 48958 49074 1 + 117 hypothetical protein - none -
fig|6666666.229923.peg.273 CDS AZTQ01000009.1 49071 49775 3 + 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229923.peg.274 CDS AZTQ01000009.1 50233 49781 -1 - 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229923.peg.275 CDS AZTQ01000009.1 50901 50287 -3 - 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229923.peg.276 CDS AZTQ01000009.1 52189 50912 -1 - 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229923.peg.277 CDS AZTQ01000009.1 53314 52211 -1 - 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229923.peg.278 CDS AZTQ01000009.1 54375 53326 -3 - 1050 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229923.peg.279 CDS AZTQ01000009.1 55069 54518 -1 - 552 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229923.peg.280 CDS AZTQ01000009.1 56231 55092 -2 - 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229923.peg.281 CDS AZTQ01000009.1 56474 56352 -2 - 123 hypothetical protein - none -
fig|6666666.229923.peg.282 CDS AZTQ01000009.1 56525 57574 2 + 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229923.peg.283 CDS AZTQ01000009.1 59039 57675 -2 - 1365 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229923.peg.284 CDS AZTQ01000009.1 60373 59132 -1 - 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229923.peg.285 CDS AZTQ01000009.1 60724 60530 -1 - 195 Protein sprT - none -
fig|6666666.229923.peg.286 CDS AZTQ01000009.1 61029 60724 -3 - 306 Protein sprT - none -
fig|6666666.229923.peg.287 CDS AZTQ01000009.1 62254 61100 -1 - 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229923.peg.288 CDS AZTQ01000009.1 62731 62462 -1 - 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229923.peg.289 CDS AZTQ01000009.1 63576 62827 -3 - 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229923.peg.290 CDS AZTQ01000009.1 65335 63629 -1 - 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229923.peg.291 CDS AZTQ01000009.1 66621 65326 -3 - 1296 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229923.peg.292 CDS AZTQ01000009.1 66747 67961 3 + 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229923.peg.293 CDS AZTQ01000009.1 68818 68087 -1 - 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229923.peg.294 CDS AZTQ01000009.1 69014 70558 2 + 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229923.peg.295 CDS AZTQ01000009.1 70582 71121 1 + 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229923.peg.296 CDS AZTQ01000009.1 71313 71167 -3 - 147 hypothetical protein - none -
fig|6666666.229923.peg.297 CDS AZTQ01000009.1 72755 71325 -2 - 1431 Transglycosylase, Slt family - none -
fig|6666666.229923.peg.298 CDS AZTQ01000009.1 73129 72776 -1 - 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229923.peg.299 CDS AZTQ01000009.1 73226 73822 2 + 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.300 CDS AZTQ01000009.1 74355 73912 -3 - 444 FIG00904084: hypothetical protein - none -
fig|6666666.229923.peg.301 CDS AZTQ01000009.1 74495 75220 2 + 726 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229923.peg.302 CDS AZTQ01000009.1 75193 75318 1 + 126 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229923.peg.303 CDS AZTQ01000009.1 76312 75521 -1 - 792 putative lipoprotein - none -
fig|6666666.229923.peg.304 CDS AZTQ01000009.1 77363 76719 -2 - 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229923.peg.305 CDS AZTQ01000009.1 79771 77507 -1 - 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229923.peg.306 CDS AZTQ01000009.1 79845 80690 3 + 846 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229923.peg.307 CDS AZTQ01000009.1 80695 81888 1 + 1194 Bicyclomycin resistance protein - none -
fig|6666666.229923.peg.308 CDS AZTQ01000009.1 82060 82695 1 + 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229923.peg.309 CDS AZTQ01000009.1 82700 83365 2 + 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229923.peg.310 CDS AZTQ01000009.1 83376 84113 3 + 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229923.peg.311 CDS AZTQ01000009.1 84131 84337 2 + 207 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229923.peg.312 CDS AZTQ01000009.1 84334 84852 1 + 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229923.peg.313 CDS AZTQ01000009.1 84852 86810 3 + 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229923.peg.314 CDS AZTQ01000009.1 86839 87384 1 + 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229923.peg.315 CDS AZTQ01000009.1 87483 87932 3 + 450 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229923.peg.316 CDS AZTQ01000009.1 87932 88855 2 + 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229923.peg.317 CDS AZTQ01000010.1 1608 796 -3 - 813 Bll0873 protein - none -
fig|6666666.229923.peg.318 CDS AZTQ01000010.1 2200 1643 -1 - 558 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229923.peg.319 CDS AZTQ01000010.1 4013 2433 -2 - 1581 Recombinase - none -
fig|6666666.229923.peg.320 CDS AZTQ01000010.1 6256 4841 -1 - 1416 FIGfam110555 CBSS-203122.12.peg.188
fig|6666666.229923.peg.321 CDS AZTQ01000010.1 7371 6253 -3 - 1119 Mll9366 protein CBSS-203122.12.peg.188
fig|6666666.229923.peg.322 CDS AZTQ01000010.1 8222 7329 -2 - 894 TniB NTP-binding protein CBSS-203122.12.peg.188
fig|6666666.229923.peg.323 CDS AZTQ01000010.1 10141 8222 -1 - 1920 TniA putative transposase CBSS-203122.12.peg.188
fig|6666666.229923.peg.324 CDS AZTQ01000010.1 10669 10211 -1 - 459 FIGfam050825 CBSS-203122.12.peg.188
fig|6666666.229923.peg.325 CDS AZTQ01000010.1 10931 11635 2 + 705 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein CBSS-203122.12.peg.188;
CBSS-203122.12.peg.188
fig|6666666.229923.peg.326 CDS AZTQ01000010.1 12474 11647 -3 - 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229923.peg.327 CDS AZTQ01000010.1 13730 12471 -2 - 1260 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229923.peg.328 CDS AZTQ01000010.1 15596 13938 -2 - 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229923.peg.329 CDS AZTQ01000010.1 15839 15699 -2 - 141 hypothetical protein - none -
fig|6666666.229923.peg.330 CDS AZTQ01000010.1 15900 16583 3 + 684 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229923.peg.331 CDS AZTQ01000010.1 17161 16667 -1 - 495 Protein yfbU - none -
fig|6666666.229923.peg.332 CDS AZTQ01000010.1 17955 17179 -3 - 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229923.peg.333 CDS AZTQ01000010.1 19604 18021 -2 - 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229923.peg.334 CDS AZTQ01000010.1 21001 19670 -1 - 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229923.peg.335 CDS AZTQ01000010.1 21549 21022 -3 - 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229923.peg.336 CDS AZTQ01000010.1 21764 22471 2 + 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229923.peg.337 CDS AZTQ01000010.1 22606 22475 -1 - 132 hypothetical protein - none -
fig|6666666.229923.peg.338 CDS AZTQ01000010.1 23183 22950 -2 - 234 hypothetical protein - none -
fig|6666666.229923.peg.339 CDS AZTQ01000010.1 24730 23486 -1 - 1245 Tryptophan-specific transport protein - none -
fig|6666666.229923.peg.340 CDS AZTQ01000010.1 24893 25420 2 + 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229923.peg.341 CDS AZTQ01000010.1 25497 26270 3 + 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229923.peg.342 CDS AZTQ01000010.1 26717 26923 2 + 207 hypothetical protein - none -
fig|6666666.229923.peg.343 CDS AZTQ01000010.1 26951 27595 2 + 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229923.peg.344 CDS AZTQ01000010.1 28686 27682 -3 - 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229923.peg.345 CDS AZTQ01000010.1 30295 28868 -1 - 1428 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229923.peg.346 CDS AZTQ01000010.1 30311 30895 2 + 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229923.peg.347 CDS AZTQ01000010.1 31197 32174 3 + 978 PTS system, mannose-specific IIA component / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229923.peg.348 CDS AZTQ01000010.1 32192 32989 2 + 798 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229923.peg.349 CDS AZTQ01000010.1 33003 33839 3 + 837 PTS system, mannose-specific IID component - none -
fig|6666666.229923.peg.350 CDS AZTQ01000010.1 34222 35331 1 + 1110 Cof protein - none -
fig|6666666.229923.peg.351 CDS AZTQ01000010.1 35621 36871 2 + 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229923.peg.352 CDS AZTQ01000010.1 36999 37718 3 + 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229923.peg.353 CDS AZTQ01000010.1 38021 40408 2 + 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229923.peg.354 CDS AZTQ01000010.1 40424 42334 2 + 1911 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229923.peg.355 CDS AZTQ01000010.1 42343 43578 1 + 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229923.peg.356 CDS AZTQ01000010.1 43581 43874 3 + 294 AagD - none -
fig|6666666.229923.peg.357 CDS AZTQ01000010.1 43983 43837 -3 - 147 hypothetical protein - none -
fig|6666666.229923.peg.358 CDS AZTQ01000010.1 45319 43994 -1 - 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229923.peg.359 CDS AZTQ01000010.1 45490 46122 1 + 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229923.peg.360 CDS AZTQ01000010.1 48097 46796 -1 - 1302 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229923.peg.361 CDS AZTQ01000010.1 48467 48297 -2 - 171 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229923.peg.362 CDS AZTQ01000010.1 49824 48493 -3 - 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229923.peg.363 CDS AZTQ01000010.1 49811 49939 2 + 129 hypothetical protein - none -
fig|6666666.229923.peg.364 CDS AZTQ01000010.1 49950 50621 3 + 672 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229923.peg.365 CDS AZTQ01000010.1 51385 50696 -1 - 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229923.peg.366 CDS AZTQ01000010.1 51765 52424 3 + 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229923.peg.367 CDS AZTQ01000010.1 52573 52421 -1 - 153 hypothetical protein - none -
fig|6666666.229923.peg.368 CDS AZTQ01000010.1 53249 52743 -2 - 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229923.peg.369 CDS AZTQ01000010.1 53947 53462 -1 - 486 Putative membrane protein - none -
fig|6666666.229923.peg.370 CDS AZTQ01000010.1 54555 53950 -3 - 606 Galactoside O-acetyltransferase (EC 2.3.1.18) - none -
fig|6666666.229923.peg.371 CDS AZTQ01000010.1 55157 54555 -2 - 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229923.peg.372 CDS AZTQ01000010.1 55285 55665 1 + 381 FIG00782409: hypothetical protein - none -
fig|6666666.229923.peg.373 CDS AZTQ01000010.1 58196 56181 -2 - 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229923.peg.374 CDS AZTQ01000010.1 58436 58206 -2 - 231 FIG00696102: hypothetical protein - none -
fig|6666666.229923.peg.375 CDS AZTQ01000010.1 59102 58539 -2 - 564 Outer membrane protein 18/16 - none -
fig|6666666.229923.peg.376 CDS AZTQ01000010.1 59318 62119 2 + 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229923.peg.377 CDS AZTQ01000010.1 62134 62451 1 + 318 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229923.peg.378 CDS AZTQ01000010.1 62507 62830 2 + 324 hypothetical protein - none -
fig|6666666.229923.peg.379 CDS AZTQ01000010.1 64751 62937 -2 - 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229923.peg.380 CDS AZTQ01000010.1 65554 64778 -1 - 777 Protein HI0205 precursor - none -
fig|6666666.229923.peg.381 CDS AZTQ01000010.1 65834 66760 2 + 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229923.peg.382 CDS AZTQ01000010.1 66931 68058 1 + 1128 Fic family protein - none -
fig|6666666.229923.peg.383 CDS AZTQ01000010.1 68078 69121 2 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229923.peg.384 CDS AZTQ01000010.1 69239 71134 2 + 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229923.peg.385 CDS AZTQ01000010.1 71855 71220 -2 - 636 Cytochrome c-type protein NapC - none -
fig|6666666.229923.peg.386 CDS AZTQ01000010.1 72318 71869 -3 - 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229923.peg.387 CDS AZTQ01000010.1 73237 72356 -1 - 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229923.peg.388 CDS AZTQ01000010.1 74052 73237 -3 - 816 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229923.peg.389 CDS AZTQ01000010.1 74155 74018 -1 - 138 hypothetical protein - none -
fig|6666666.229923.peg.390 CDS AZTQ01000010.1 76611 74125 -3 - 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229923.peg.391 CDS AZTQ01000010.1 76931 76647 -2 - 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229923.peg.392 CDS AZTQ01000010.1 77238 77092 -3 - 147 hypothetical protein - none -
fig|6666666.229923.peg.393 CDS AZTQ01000010.1 77207 78910 2 + 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229923.peg.394 CDS AZTQ01000010.1 78925 79950 1 + 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229923.peg.395 CDS AZTQ01000010.1 79965 80279 3 + 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229923.peg.396 CDS AZTQ01000010.1 80464 81312 1 + 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229923.peg.397 CDS AZTQ01000010.1 81905 81378 -2 - 528 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229923.peg.398 CDS AZTQ01000010.1 82177 82052 -1 - 126 hypothetical protein - none -
fig|6666666.229923.peg.399 CDS AZTQ01000011.1 1017 838 -3 - 180 hypothetical protein - none -
fig|6666666.229923.peg.400 CDS AZTQ01000011.1 1472 1320 -2 - 153 hypothetical protein - none -
fig|6666666.229923.peg.401 CDS AZTQ01000011.1 3447 2689 -3 - 759 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229923.peg.402 CDS AZTQ01000011.1 3903 3457 -3 - 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229923.peg.403 CDS AZTQ01000011.1 4377 3907 -3 - 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229923.peg.404 CDS AZTQ01000011.1 5809 4547 -1 - 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229923.peg.405 CDS AZTQ01000011.1 6675 5884 -3 - 792 FIG001154: CcsA-related protein - none -
fig|6666666.229923.peg.406 CDS AZTQ01000011.1 6829 8208 1 + 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229923.peg.407 CDS AZTQ01000011.1 8441 8247 -2 - 195 hypothetical protein - none -
fig|6666666.229923.peg.408 CDS AZTQ01000011.1 9615 8785 -3 - 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229923.peg.409 CDS AZTQ01000011.1 10770 9646 -3 - 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229923.peg.410 CDS AZTQ01000011.1 10909 11316 1 + 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229923.peg.411 CDS AZTQ01000011.1 12178 11429 -1 - 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229923.peg.412 CDS AZTQ01000011.1 13292 12330 -2 - 963 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) - none -
fig|6666666.229923.peg.413 CDS AZTQ01000011.1 14995 13628 -1 - 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229923.peg.414 CDS AZTQ01000011.1 15630 15019 -3 - 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229923.peg.415 CDS AZTQ01000011.1 15743 16153 2 + 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229923.peg.416 CDS AZTQ01000011.1 16291 16827 1 + 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229923.peg.417 CDS AZTQ01000011.1 16894 17826 1 + 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229923.peg.418 CDS AZTQ01000011.1 17905 18768 1 + 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229923.peg.419 CDS AZTQ01000011.1 18783 19610 3 + 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229923.peg.420 CDS AZTQ01000011.1 19701 20120 3 + 420 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229923.peg.421 CDS AZTQ01000011.1 20104 20397 1 + 294 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.422 CDS AZTQ01000011.1 20425 21057 1 + 633 FIG00696423: hypothetical protein - none -
fig|6666666.229923.peg.423 CDS AZTQ01000011.1 21178 23766 1 + 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229923.peg.424 CDS AZTQ01000011.1 23919 23791 -3 - 129 hypothetical protein - none -
fig|6666666.229923.peg.425 CDS AZTQ01000011.1 23908 24411 1 + 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229923.peg.426 CDS AZTQ01000011.1 24411 25445 3 + 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229923.peg.427 CDS AZTQ01000011.1 26338 25934 -1 - 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229923.peg.428 CDS AZTQ01000011.1 29114 26415 -2 - 2700 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229923.peg.429 CDS AZTQ01000011.1 29450 29187 -2 - 264 hypothetical protein - none -
fig|6666666.229923.peg.430 CDS AZTQ01000011.1 29629 29501 -1 - 129 hypothetical protein - none -
fig|6666666.229923.peg.431 CDS AZTQ01000011.1 29596 29907 1 + 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229923.peg.432 CDS AZTQ01000011.1 30028 30438 1 + 411 Mercuric resistance operon regulatory protein - none -
fig|6666666.229923.peg.433 CDS AZTQ01000011.1 33337 30506 -1 - 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229923.peg.434 CDS AZTQ01000011.1 33508 33987 1 + 480 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229923.peg.435 CDS AZTQ01000011.1 34659 34081 -3 - 579 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229923.peg.436 CDS AZTQ01000011.1 36479 34659 -2 - 1821 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229923.peg.437 CDS AZTQ01000011.1 37742 36888 -2 - 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229923.peg.438 CDS AZTQ01000011.1 38833 37745 -1 - 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229923.peg.439 CDS AZTQ01000011.1 39387 38860 -3 - 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229923.peg.440 CDS AZTQ01000011.1 41008 39644 -1 - 1365 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229923.peg.441 CDS AZTQ01000011.1 41421 41029 -3 - 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229923.peg.442 CDS AZTQ01000011.1 41945 41505 -2 - 441 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229923.peg.443 CDS AZTQ01000011.1 42460 41942 -1 - 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229923.peg.444 CDS AZTQ01000011.1 43280 42471 -2 - 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229923.peg.445 CDS AZTQ01000011.1 43409 45973 2 + 2565 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229923.peg.446 CDS AZTQ01000011.1 46070 46915 2 + 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229923.peg.447 CDS AZTQ01000011.1 47010 48380 3 + 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229923.peg.448 CDS AZTQ01000011.1 49157 48513 -2 - 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229923.peg.449 CDS AZTQ01000011.1 49413 49195 -3 - 219 FIG00696234: hypothetical protein - none -
fig|6666666.229923.peg.450 CDS AZTQ01000011.1 50036 49437 -2 - 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229923.peg.451 CDS AZTQ01000011.1 50491 50036 -1 - 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229923.peg.452 CDS AZTQ01000011.1 51759 50560 -3 - 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229923.peg.453 CDS AZTQ01000011.1 51937 52596 1 + 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229923.peg.454 CDS AZTQ01000011.1 52868 53041 2 + 174 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.229923.peg.455 CDS AZTQ01000011.1 53053 53223 1 + 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229923.peg.456 CDS AZTQ01000011.1 53306 54121 2 + 816 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229923.peg.457 CDS AZTQ01000011.1 55176 54124 -3 - 1053 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229923.peg.458 CDS AZTQ01000011.1 56208 55186 -3 - 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229923.peg.459 CDS AZTQ01000011.1 56901 56209 -3 - 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229923.peg.460 CDS AZTQ01000011.1 57175 56963 -1 - 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229923.peg.461 CDS AZTQ01000011.1 57434 58282 2 + 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229923.peg.462 CDS AZTQ01000012.1 917 90 -2 - 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229923.peg.463 CDS AZTQ01000012.1 1445 948 -2 - 498 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229923.peg.464 CDS AZTQ01000012.1 3519 1438 -3 - 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229923.peg.465 CDS AZTQ01000012.1 5641 3521 -1 - 2121 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229923.peg.466 CDS AZTQ01000012.1 5953 5687 -1 - 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229923.peg.467 CDS AZTQ01000012.1 6648 6010 -3 - 639 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229923.peg.468 CDS AZTQ01000012.1 6889 7893 1 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229923.peg.469 CDS AZTQ01000012.1 8404 7988 -1 - 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229923.peg.470 CDS AZTQ01000012.1 8477 8908 2 + 432 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229923.peg.471 CDS AZTQ01000012.1 8871 9194 3 + 324 UPF0125 protein yfjF - none -
fig|6666666.229923.peg.472 CDS AZTQ01000012.1 9228 10421 3 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229923.peg.473 CDS AZTQ01000012.1 10426 11760 1 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229923.peg.474 CDS AZTQ01000012.1 12620 11766 -2 - 855 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.229923.peg.475 CDS AZTQ01000012.1 13182 12649 -3 - 534 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229923.peg.476 CDS AZTQ01000012.1 13911 13186 -3 - 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229923.peg.477 CDS AZTQ01000012.1 14435 13917 -2 - 519 LptA, protein essential for LPS transport across the periplasm KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229923.peg.478 CDS AZTQ01000012.1 14991 14416 -3 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229923.peg.479 CDS AZTQ01000012.1 15675 15442 -3 - 234 hypothetical protein - none -
fig|6666666.229923.peg.480 CDS AZTQ01000012.1 16431 15985 -3 - 447 hypothetical protein - none -
fig|6666666.229923.peg.481 CDS AZTQ01000012.1 16710 16444 -3 - 267 FIG00697940: hypothetical protein - none -
fig|6666666.229923.peg.482 CDS AZTQ01000013.1 192 25 -3 - 168 RNA-binding domain protein - none -
fig|6666666.229923.peg.483 CDS AZTQ01000013.1 712 206 -1 - 507 FIG00696806: hypothetical protein - none -
fig|6666666.229923.peg.484 CDS AZTQ01000013.1 953 783 -2 - 171 hypothetical protein - none -
fig|6666666.229923.peg.485 CDS AZTQ01000013.1 1487 1035 -2 - 453 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229923.peg.486 CDS AZTQ01000013.1 1697 3091 2 + 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229923.peg.487 CDS AZTQ01000013.1 3195 3800 3 + 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229923.peg.488 CDS AZTQ01000013.1 4044 3808 -3 - 237 YcfP protein: probably an esterase that is part of a salvage cluster - none -
fig|6666666.229923.peg.489 CDS AZTQ01000013.1 4930 4115 -1 - 816 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229923.peg.490 CDS AZTQ01000013.1 5755 5021 -1 - 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229923.peg.491 CDS AZTQ01000013.1 5883 6146 3 + 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229923.peg.492 CDS AZTQ01000013.1 6420 6295 -3 - 126 hypothetical protein - none -
fig|6666666.229923.peg.493 CDS AZTQ01000013.1 6814 8028 1 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229923.peg.494 CDS AZTQ01000013.1 8806 8111 -1 - 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229923.peg.495 CDS AZTQ01000013.1 9660 8800 -3 - 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229923.peg.496 CDS AZTQ01000013.1 10448 9699 -2 - 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229923.peg.497 CDS AZTQ01000013.1 11631 10540 -3 - 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229923.peg.498 CDS AZTQ01000013.1 11978 13750 2 + 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229923.peg.499 CDS AZTQ01000013.1 13805 14266 2 + 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229923.peg.500 CDS AZTQ01000013.1 14343 15017 3 + 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229923.peg.501 CDS AZTQ01000013.1 17436 15127 -3 - 2310 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229923.peg.502 CDS AZTQ01000014.1 216 350 3 + 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.229923.peg.503 CDS AZTQ01000014.1 396 731 3 + 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229923.peg.504 CDS AZTQ01000014.1 686 949 2 + 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229923.peg.505 CDS AZTQ01000014.1 991 2580 1 + 1590 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229923.peg.506 CDS AZTQ01000014.1 2738 2625 -2 - 114 hypothetical protein - none -
fig|6666666.229923.peg.507 CDS AZTQ01000014.1 2783 4138 2 + 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229923.peg.508 CDS AZTQ01000014.1 5160 4252 -3 - 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.229923.peg.509 CDS AZTQ01000014.1 5837 5157 -2 - 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229923.peg.510 CDS AZTQ01000014.1 6866 5844 -2 - 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229923.peg.511 CDS AZTQ01000014.1 8673 6877 -3 - 1797 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229923.peg.512 CDS AZTQ01000014.1 8736 8858 3 + 123 hypothetical protein - none -
fig|6666666.229923.peg.513 CDS AZTQ01000014.1 9225 8842 -3 - 384 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.229923.peg.514 CDS AZTQ01000014.1 9512 10180 2 + 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229923.peg.515 CDS AZTQ01000014.1 10202 10981 2 + 780 UPF0246 protein YaaA - none -
fig|6666666.229923.peg.516 CDS AZTQ01000014.1 10983 11549 3 + 567 FIG00696199: hypothetical protein - none -
fig|6666666.229923.peg.517 CDS AZTQ01000014.1 11549 12469 2 + 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229923.peg.518 CDS AZTQ01000014.1 12531 13496 3 + 966 6-phosphofructokinase (EC 2.7.1.11) D-Tagatose and Galactitol Utilization;
Glycolysis and Gluconeogenesis
fig|6666666.229923.peg.519 CDS AZTQ01000014.1 14775 13600 -3 - 1176 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229923.peg.520 CDS AZTQ01000014.1 15904 14777 -1 - 1128 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229923.peg.521 CDS AZTQ01000014.1 16259 15906 -2 - 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229923.peg.522 CDS AZTQ01000014.1 16610 16260 -2 - 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229923.peg.523 CDS AZTQ01000014.1 16924 17775 1 + 852 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229923.peg.524 CDS AZTQ01000014.1 17877 20189 3 + 2313 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.229923.peg.525 CDS AZTQ01000015.1 493 792 1 + 300 Sugar kinases, ribokinase family - none -
fig|6666666.229923.peg.526 CDS AZTQ01000015.1 2856 2029 -3 - 828 Thermostable 8-oxoguanine DNA glycosylase - none -
fig|6666666.229923.peg.527 CDS AZTQ01000015.1 3531 2872 -3 - 660 Methyltransferase - none -
fig|6666666.229923.peg.528 CDS AZTQ01000015.1 3803 5827 2 + 2025 VgrG-3 protein - none -
fig|6666666.229923.peg.529 CDS AZTQ01000016.1 1955 54 -2 - 1902 ABC transporter ATP-binding protein - none -
fig|6666666.229923.peg.530 CDS AZTQ01000016.1 2108 2410 2 + 303 FIG022160: hypothetical toxin - none -
fig|6666666.229923.peg.531 CDS AZTQ01000016.1 2412 2705 3 + 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229923.peg.532 CDS AZTQ01000016.1 4094 2742 -2 - 1353 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.229923.peg.533 CDS AZTQ01000016.1 4788 4096 -3 - 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229923.peg.534 CDS AZTQ01000016.1 5147 4788 -2 - 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229923.peg.535 CDS AZTQ01000016.1 5617 6117 1 + 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229923.peg.536 CDS AZTQ01000016.1 6123 7322 3 + 1200 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229923.peg.537 CDS AZTQ01000016.1 7319 7699 2 + 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229923.peg.538 CDS AZTQ01000016.1 9173 7743 -2 - 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229923.peg.539 CDS AZTQ01000016.1 9288 10223 3 + 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229923.peg.540 CDS AZTQ01000016.1 10844 10281 -2 - 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229923.peg.541 CDS AZTQ01000016.1 11455 10844 -1 - 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229923.peg.542 CDS AZTQ01000016.1 11910 11464 -3 - 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229923.peg.543 CDS AZTQ01000016.1 12859 11933 -1 - 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229923.peg.544 CDS AZTQ01000018.1 732 121 -3 - 612 Peptide transport system ATP-binding protein SapF - none -
fig|6666666.229923.peg.545 CDS AZTQ01000019.1 20 580 2 + 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229923.peg.546 CDS AZTQ01000019.1 646 2988 1 + 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229923.peg.547 CDS AZTQ01000019.1 3109 2975 -1 - 135 hypothetical protein - none -
fig|6666666.229923.peg.548 CDS AZTQ01000019.1 3543 3079 -3 - 465 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229923.peg.549 CDS AZTQ01000019.1 3665 5125 2 + 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229923.peg.550 CDS AZTQ01000019.1 5960 5205 -2 - 756 Short chain dehydrogenase - none -
fig|6666666.229923.peg.551 CDS AZTQ01000019.1 6567 6055 -3 - 513 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229923.peg.552 CDS AZTQ01000019.1 7410 6973 -3 - 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229923.peg.553 CDS AZTQ01000019.1 8376 7420 -3 - 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229923.peg.554 CDS AZTQ01000019.1 9042 8458 -3 - 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229923.peg.555 CDS AZTQ01000019.1 9656 9081 -2 - 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229923.peg.556 CDS AZTQ01000019.1 10043 9789 -2 - 255 YgfY COG2938 - none -
fig|6666666.229923.peg.557 CDS AZTQ01000019.1 10412 10083 -2 - 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229923.peg.558 CDS AZTQ01000019.1 12194 10479 -2 - 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229923.peg.559 CDS AZTQ01000019.1 12226 12342 1 + 117 hypothetical protein - none -
fig|6666666.229923.peg.560 CDS AZTQ01000019.1 12345 13739 3 + 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229923.peg.561 CDS AZTQ01000019.1 13736 15595 2 + 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229923.peg.562 CDS AZTQ01000019.1 15641 16543 2 + 903 hypothetical protein - none -
fig|6666666.229923.peg.563 CDS AZTQ01000019.1 17298 16582 -3 - 717 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229923.peg.564 CDS AZTQ01000019.1 17449 17300 -1 - 150 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229923.peg.565 CDS AZTQ01000020.1 410 607 2 + 198 Mobile element protein - none -
fig|6666666.229923.peg.566 CDS AZTQ01000020.1 2364 832 -3 - 1533 Na+/H+ antiporter - none -
fig|6666666.229923.peg.567 CDS AZTQ01000020.1 2805 3203 3 + 399 DNA-binding protein H-NS - none -
fig|6666666.229923.peg.568 CDS AZTQ01000021.1 69 2078 3 + 2010 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229923.peg.569 CDS AZTQ01000021.1 3242 2220 -2 - 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229923.peg.570 CDS AZTQ01000021.1 4025 3264 -2 - 762 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229923.peg.571 CDS AZTQ01000021.1 4725 4063 -3 - 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229923.peg.572 CDS AZTQ01000021.1 4959 4729 -3 - 231 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229923.peg.573 CDS AZTQ01000021.1 5251 5135 -1 - 117 hypothetical protein - none -
fig|6666666.229923.peg.574 CDS AZTQ01000021.1 6242 5370 -2 - 873 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229923.peg.575 CDS AZTQ01000021.1 6727 6311 -1 - 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229923.peg.576 CDS AZTQ01000021.1 7399 6740 -1 - 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229923.peg.577 CDS AZTQ01000021.1 7480 8028 1 + 549 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229923.peg.578 CDS AZTQ01000021.1 8914 8033 -1 - 882 Transcriptional regulator, AraC family - none -
fig|6666666.229923.peg.579 CDS AZTQ01000021.1 9611 8985 -2 - 627 membrane protein ykgB - none -
fig|6666666.229923.peg.580 CDS AZTQ01000022.1 45 1595 3 + 1551 oligopeptide transporter - none -
fig|6666666.229923.peg.581 CDS AZTQ01000022.1 1657 2085 1 + 429 hypothetical protein - none -
fig|6666666.229923.peg.582 CDS AZTQ01000022.1 2123 2932 2 + 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229923.peg.583 CDS AZTQ01000022.1 3014 4498 2 + 1485 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229923.peg.584 CDS AZTQ01000022.1 4674 5372 3 + 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229923.peg.585 CDS AZTQ01000022.1 5967 6110 3 + 144 Aspartate racemase (EC 5.1.1.13) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229923.peg.586 CDS AZTQ01000022.1 6123 6377 3 + 255 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229923.peg.587 CDS AZTQ01000022.1 6457 6915 1 + 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229923.peg.588 CDS AZTQ01000022.1 7011 8534 3 + 1524 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229923.peg.589 CDS AZTQ01000023.1 86 1039 2 + 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229923.peg.590 CDS AZTQ01000023.1 1058 1171 2 + 114 hypothetical protein - none -
fig|6666666.229923.peg.591 CDS AZTQ01000023.1 1171 3168 1 + 1998 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229923.peg.592 CDS AZTQ01000023.1 3629 3240 -2 - 390 Endoribonuclease L-PSP - none -
fig|6666666.229923.peg.593 CDS AZTQ01000023.1 4165 3707 -1 - 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229923.peg.594 CDS AZTQ01000023.1 5302 4244 -1 - 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229923.peg.595 CDS AZTQ01000023.1 6748 5447 -1 - 1302 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229923.peg.596 CDS AZTQ01000023.1 7371 6775 -3 - 597 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229923.peg.597 CDS AZTQ01000023.1 7452 8069 3 + 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229923.peg.598 CDS AZTQ01000023.1 8174 8875 2 + 702 probable exported protein STY1423 - none -
fig|6666666.229923.peg.599 CDS AZTQ01000023.1 8882 10897 2 + 2016 Putative uncharacterized protein ydbH - none -
fig|6666666.229923.peg.600 CDS AZTQ01000023.1 10894 11124 1 + 231 FIG00354920: hypothetical protein - none -
fig|6666666.229923.peg.601 CDS AZTQ01000023.1 12018 12581 3 + 564 Integrase - none -
fig|6666666.229923.peg.602 CDS AZTQ01000023.1 12595 12954 1 + 360 Mobile element protein - none -
fig|6666666.229923.peg.603 CDS AZTQ01000023.1 12975 13376 3 + 402 Mobile element protein - none -
fig|6666666.229923.peg.604 CDS AZTQ01000023.1 13675 14403 1 + 729 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229923.peg.605 CDS AZTQ01000023.1 14367 15116 3 + 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229923.peg.606 CDS AZTQ01000024.1 158 2596 2 + 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.607 CDS AZTQ01000024.1 4481 2637 -2 - 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229923.peg.608 CDS AZTQ01000024.1 5488 4571 -1 - 918 transcriptional regulator MtrA - none -
fig|6666666.229923.peg.609 CDS AZTQ01000024.1 5592 5933 3 + 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229923.peg.610 CDS AZTQ01000024.1 7076 6033 -2 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229923.peg.611 CDS AZTQ01000024.1 7166 7891 2 + 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229923.peg.612 CDS AZTQ01000024.1 8420 7935 -2 - 486 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229923.peg.613 CDS AZTQ01000024.1 9704 8421 -2 - 1284 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) KDO2-Lipid A biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229923.peg.614 CDS AZTQ01000024.1 9803 10564 2 + 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229923.peg.615 CDS AZTQ01000024.1 11799 10630 -3 - 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229923.peg.616 CDS AZTQ01000024.1 12007 11816 -1 - 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229923.peg.617 CDS AZTQ01000024.1 12597 12022 -3 - 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229923.peg.618 CDS AZTQ01000024.1 13365 12625 -3 - 741 5-nucleotidase SurE (EC 3.1.3.5) Housecleaning nucleoside triphosphate pyrophosphatases;
Stationary phase repair cluster
fig|6666666.229923.peg.619 CDS AZTQ01000024.1 14408 13398 -2 - 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229923.peg.620 CDS AZTQ01000024.1 14884 14405 -1 - 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229923.peg.621 CDS AZTQ01000024.1 15576 14881 -3 - 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229923.peg.622 CDS AZTQ01000024.1 15854 15576 -2 - 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229923.peg.623 CDS AZTQ01000024.1 16006 16680 1 + 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229923.peg.624 CDS AZTQ01000024.1 16684 17358 1 + 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229923.peg.625 CDS AZTQ01000024.1 17635 18285 1 + 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229923.peg.626 CDS AZTQ01000024.1 18294 19226 3 + 933 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229923.peg.627 CDS AZTQ01000024.1 19915 19262 -1 - 654 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229923.peg.628 CDS AZTQ01000024.1 20683 19943 -1 - 741 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229923.peg.629 CDS AZTQ01000025.1 648 10 -3 - 639 hypothetical protein - none -
fig|6666666.229923.peg.630 CDS AZTQ01000025.1 1728 1531 -3 - 198 hypothetical protein - none -
fig|6666666.229923.peg.631 CDS AZTQ01000025.1 3553 3768 1 + 216 hypothetical protein - none -
fig|6666666.229923.peg.632 CDS AZTQ01000025.1 3772 4572 1 + 801 Cell filamentation protein fic - none -
fig|6666666.229923.peg.633 CDS AZTQ01000025.1 5476 4649 -1 - 828 Cell filamentation protein fic - none -
fig|6666666.229923.peg.634 CDS AZTQ01000025.1 5756 5478 -2 - 279 hypothetical protein - none -
fig|6666666.229923.peg.635 CDS AZTQ01000025.1 6177 5854 -3 - 324 hypothetical protein - none -
fig|6666666.229923.peg.636 CDS AZTQ01000025.1 7695 6610 -3 - 1086 Peptidoglycan hydrolase VirB1, involved in T-DNA transfer - none -
fig|6666666.229923.peg.637 CDS AZTQ01000025.1 8699 9808 2 + 1110 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229923.peg.638 CDS AZTQ01000025.1 9814 10827 1 + 1014 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229923.peg.639 CDS AZTQ01000025.1 11035 11250 1 + 216 Thioredoxin - none -
fig|6666666.229923.peg.640 CDS AZTQ01000025.1 12395 11436 -2 - 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229923.peg.641 CDS AZTQ01000025.1 12868 15750 1 + 2883 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229923.peg.642 CDS AZTQ01000025.1 16578 16189 -3 - 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229923.peg.643 CDS AZTQ01000025.1 18508 16658 -1 - 1851 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229923.peg.644 CDS AZTQ01000025.1 18672 19241 3 + 570 Lysine decarboxylase family - none -
fig|6666666.229923.peg.645 CDS AZTQ01000025.1 19453 19719 1 + 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229923.peg.646 CDS AZTQ01000025.1 20124 20831 3 + 708 Aerobic respiration control protein arcA - none -
fig|6666666.229923.peg.647 CDS AZTQ01000025.1 21925 20927 -1 - 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229923.peg.648 CDS AZTQ01000025.1 22905 21922 -3 - 984 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229923.peg.649 CDS AZTQ01000025.1 23853 22915 -3 - 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229923.peg.650 CDS AZTQ01000025.1 24783 23863 -3 - 921 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229923.peg.651 CDS AZTQ01000025.1 24878 24765 -2 - 114 hypothetical protein - none -
fig|6666666.229923.peg.652 CDS AZTQ01000025.1 26511 24886 -3 - 1626 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229923.peg.653 CDS AZTQ01000025.1 26891 27373 2 + 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229923.peg.654 CDS AZTQ01000025.1 27325 27444 1 + 120 hypothetical protein - none -
fig|6666666.229923.peg.655 CDS AZTQ01000025.1 28616 27441 -2 - 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229923.peg.656 CDS AZTQ01000025.1 29474 28653 -2 - 822 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229923.peg.657 CDS AZTQ01000025.1 30582 29638 -3 - 945 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229923.peg.658 CDS AZTQ01000025.1 30911 30654 -2 - 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229923.peg.659 CDS AZTQ01000025.1 31243 30932 -1 - 312 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229923.peg.660 CDS AZTQ01000025.1 31510 32481 1 + 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229923.peg.661 CDS AZTQ01000025.1 33328 34056 1 + 729 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229923.peg.662 CDS AZTQ01000025.1 34598 35983 2 + 1386 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229923.peg.663 CDS AZTQ01000025.1 36609 36040 -3 - 570 Primosomal replication protein N@1@1 - none -
fig|6666666.229923.peg.664 CDS AZTQ01000025.1 38031 36679 -3 - 1353 Histidine permease YuiF - none -
fig|6666666.229923.peg.665 CDS AZTQ01000025.1 39125 38472 -2 - 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229923.peg.666 CDS AZTQ01000025.1 39614 39207 -2 - 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229923.peg.667 CDS AZTQ01000025.1 41721 39769 -3 - 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229923.peg.668 CDS AZTQ01000025.1 42123 43454 3 + 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229923.peg.669 CDS AZTQ01000025.1 43596 46163 3 + 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229923.peg.670 CDS AZTQ01000025.1 46967 46242 -2 - 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229923.peg.671 CDS AZTQ01000025.1 47766 49544 3 + 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229923.peg.672 CDS AZTQ01000025.1 49627 49743 1 + 117 hypothetical protein - none -
fig|6666666.229923.peg.673 CDS AZTQ01000025.1 49930 51198 1 + 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229923.peg.674 CDS AZTQ01000026.1 1386 166 -3 - 1221 Phage integrase - none -
fig|6666666.229923.peg.675 CDS AZTQ01000026.1 1846 3600 1 + 1755 Putative sulfate permease - none -
fig|6666666.229923.peg.676 CDS AZTQ01000026.1 3751 3626 -1 - 126 hypothetical protein - none -
fig|6666666.229923.peg.677 CDS AZTQ01000026.1 5489 4554 -2 - 936 hypothetical protein - none -
fig|6666666.229923.peg.678 CDS AZTQ01000026.1 5733 5515 -3 - 219 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229923.peg.679 CDS AZTQ01000026.1 6686 5973 -2 - 714 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229923.peg.680 CDS AZTQ01000026.1 7462 6707 -1 - 756 Hexuronate utilization operon transcriptional repressor ExuR D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229923.peg.681 CDS AZTQ01000026.1 9853 7478 -1 - 2376 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229923.peg.682 CDS AZTQ01000026.1 11178 9877 -3 - 1302 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229923.peg.683 CDS AZTQ01000026.1 11884 12882 1 + 999 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229923.peg.684 CDS AZTQ01000026.1 12933 13877 3 + 945 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229923.peg.685 CDS AZTQ01000026.1 13889 14737 2 + 849 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229923.peg.686 CDS AZTQ01000026.1 14748 16151 3 + 1404 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229923.peg.687 CDS AZTQ01000026.1 16160 16801 2 + 642 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229923.peg.688 CDS AZTQ01000026.1 17545 16886 -1 - 660 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229923.peg.689 CDS AZTQ01000026.1 17933 17523 -2 - 411 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229923.peg.690 CDS AZTQ01000026.1 18107 18244 2 + 138 hypothetical protein - none -
fig|6666666.229923.peg.691 CDS AZTQ01000026.1 19473 18241 -3 - 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229923.peg.692 CDS AZTQ01000026.1 20149 19493 -1 - 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229923.peg.693 CDS AZTQ01000026.1 21418 20249 -1 - 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229923.peg.694 CDS AZTQ01000026.1 21743 21420 -2 - 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229923.peg.695 CDS AZTQ01000026.1 22462 21782 -1 - 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229923.peg.696 CDS AZTQ01000026.1 22816 22487 -1 - 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229923.peg.697 CDS AZTQ01000026.1 23020 22856 -1 - 165 hypothetical protein - none -
fig|6666666.229923.peg.698 CDS AZTQ01000028.1 269 718 2 + 450 ImpA - none -
fig|6666666.229923.peg.699 CDS AZTQ01000028.1 1296 1117 -3 - 180 hypothetical protein - none -
fig|6666666.229923.peg.700 CDS AZTQ01000028.1 2938 1472 -1 - 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.229923.peg.701 CDS AZTQ01000028.1 3080 4012 2 + 933 Biotin--protein ligase (EC 6.3.4.9, EC 6.3.4.10, EC 6.3.4.11, EC 6.3.4.15) - none -
fig|6666666.229923.peg.702 CDS AZTQ01000028.1 4099 4302 1 + 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229923.peg.703 CDS AZTQ01000029.1 281 1096 2 + 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229923.peg.704 CDS AZTQ01000029.1 2079 1186 -3 - 894 Transcriptional regulator, LysR family - none -
fig|6666666.229923.peg.705 CDS AZTQ01000029.1 2379 3224 3 + 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229923.peg.706 CDS AZTQ01000029.1 3431 3757 2 + 327 FIG022160: hypothetical toxin - none -
fig|6666666.229923.peg.707 CDS AZTQ01000029.1 3750 4034 3 + 285 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229923.peg.708 CDS AZTQ01000029.1 4396 4818 1 + 423 Aldo-keto reductase - none -
fig|6666666.229923.peg.709 CDS AZTQ01000029.1 4857 5531 3 + 675 Aldo-keto reductase - none -
fig|6666666.229923.peg.710 CDS AZTQ01000029.1 5584 6564 1 + 981 Aldo-keto reductase - none -
fig|6666666.229923.peg.711 CDS AZTQ01000029.1 6777 8435 3 + 1659 Carboxylesterase type B - none -
fig|6666666.229923.peg.712 CDS AZTQ01000029.1 8766 9875 3 + 1110 Putative exported protein precursor - none -
fig|6666666.229923.peg.713 CDS AZTQ01000029.1 10906 10016 -1 - 891 Transcriptional regulator, LysR family - none -
fig|6666666.229923.peg.714 CDS AZTQ01000029.1 11010 12074 3 + 1065 FIG01220323: hypothetical protein - none -
fig|6666666.229923.peg.715 CDS AZTQ01000029.1 14060 12228 -2 - 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229923.peg.716 CDS AZTQ01000029.1 14891 14115 -2 - 777 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229923.peg.717 CDS AZTQ01000029.1 15310 15038 -1 - 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229923.peg.718 CDS AZTQ01000029.1 16070 15477 -2 - 594 FIG01200173: hypothetical protein - none -
fig|6666666.229923.peg.719 CDS AZTQ01000029.1 17149 16085 -1 - 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229923.peg.720 CDS AZTQ01000029.1 17476 17162 -1 - 315 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229923.peg.721 CDS AZTQ01000030.1 1177 533 -1 - 645 converved hypothetical protein - none -
fig|6666666.229923.peg.722 CDS AZTQ01000030.1 1437 3053 3 + 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229923.peg.723 CDS AZTQ01000030.1 4664 3117 -2 - 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229923.peg.724 CDS AZTQ01000030.1 8548 4667 -1 - 3882 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229923.peg.725 CDS AZTQ01000030.1 10435 8576 -1 - 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229923.peg.726 CDS AZTQ01000030.1 11131 10502 -1 - 630 Nitrate/nitrite response regulator protein - none -
fig|6666666.229923.peg.727 CDS AZTQ01000030.1 13642 11141 -1 - 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229923.peg.728 CDS AZTQ01000030.1 13798 14724 1 + 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229923.peg.729 CDS AZTQ01000030.1 14737 15483 1 + 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229923.peg.730 CDS AZTQ01000030.1 15511 16896 1 + 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229923.peg.731 CDS AZTQ01000030.1 16909 18156 1 + 1248 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229923.peg.732 CDS AZTQ01000030.1 18969 18232 -3 - 738 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229923.peg.733 CDS AZTQ01000030.1 19230 19511 3 + 282 hypothetical protein - none -
fig|6666666.229923.peg.734 CDS AZTQ01000030.1 19697 20284 2 + 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229923.peg.735 CDS AZTQ01000030.1 20299 20490 1 + 192 hypothetical protein - none -
fig|6666666.229923.peg.736 CDS AZTQ01000030.1 21055 20573 -1 - 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229923.peg.737 CDS AZTQ01000030.1 21185 21343 2 + 159 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229923.peg.738 CDS AZTQ01000030.1 21350 21469 2 + 120 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229923.peg.739 CDS AZTQ01000030.1 21470 21658 2 + 189 hypothetical protein - none -
fig|6666666.229923.peg.740 CDS AZTQ01000030.1 22394 21795 -2 - 600 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229923.peg.741 CDS AZTQ01000030.1 23875 22406 -1 - 1470 Sodium-dependent transporter - none -
fig|6666666.229923.peg.742 CDS AZTQ01000030.1 23985 24872 3 + 888 RuBisCO operon transcriptional regulator CO2 uptake, carboxysome
fig|6666666.229923.peg.743 CDS AZTQ01000030.1 25090 27405 1 + 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229923.peg.744 CDS AZTQ01000030.1 28913 27456 -2 - 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229923.peg.745 CDS AZTQ01000030.1 29947 28919 -1 - 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229923.peg.746 CDS AZTQ01000030.1 31450 29963 -1 - 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229923.peg.747 CDS AZTQ01000030.1 31613 32554 2 + 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229923.peg.748 CDS AZTQ01000031.1 405 1277 3 + 873 hypothetical protein - none -
fig|6666666.229923.peg.749 CDS AZTQ01000031.1 1671 1318 -3 - 354 Putative translation initiation inhibitor, yjgF family - none -
fig|6666666.229923.peg.750 CDS AZTQ01000031.1 1812 2489 3 + 678 FIG00904286: hypothetical protein - none -
fig|6666666.229923.peg.751 CDS AZTQ01000031.1 2492 3205 2 + 714 hypothetical protein - none -
fig|6666666.229923.peg.752 CDS AZTQ01000031.1 3866 3255 -2 - 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229923.peg.753 CDS AZTQ01000031.1 6400 4145 -1 - 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229923.peg.754 CDS AZTQ01000032.1 986 96 -2 - 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229923.peg.755 CDS AZTQ01000032.1 2552 1008 -2 - 1545 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229923.peg.756 CDS AZTQ01000032.1 3891 2701 -3 - 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229923.peg.757 CDS AZTQ01000032.1 4347 5465 3 + 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229923.peg.758 CDS AZTQ01000032.1 5542 6825 1 + 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229923.peg.759 CDS AZTQ01000032.1 6913 7812 1 + 900 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229923.peg.760 CDS AZTQ01000033.1 296 685 2 + 390 Type II restriction enzyme HpaII (EC 3.1.21.4) - none -
fig|6666666.229923.peg.761 CDS AZTQ01000033.1 871 680 -1 - 192 HipA protein Persister Cells
fig|6666666.229923.peg.762 CDS AZTQ01000033.1 1090 977 -1 - 114 hypothetical protein - none -
fig|6666666.229923.peg.763 CDS AZTQ01000033.1 1359 1054 -3 - 306 HipA protein Persister Cells
fig|6666666.229923.peg.764 CDS AZTQ01000033.1 1712 1593 -2 - 120 HipA protein Persister Cells
fig|6666666.229923.peg.765 CDS AZTQ01000033.1 1772 1885 2 + 114 hypothetical protein - none -
fig|6666666.229923.peg.766 CDS AZTQ01000033.1 2181 1900 -3 - 282 HipB protein Persister Cells
fig|6666666.229923.peg.767 CDS AZTQ01000033.1 3815 2298 -2 - 1518 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229923.peg.768 CDS AZTQ01000033.1 4985 3825 -2 - 1161 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229923.peg.769 CDS AZTQ01000033.1 5171 5653 2 + 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229923.peg.770 CDS AZTQ01000033.1 7748 5769 -2 - 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229923.peg.771 CDS AZTQ01000033.1 8608 7820 -1 - 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229923.peg.772 CDS AZTQ01000033.1 8809 8675 -1 - 135 FIG050068: DNA-binding protein - none -
fig|6666666.229923.peg.773 CDS AZTQ01000033.1 9845 9090 -2 - 756 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229923.peg.774 CDS AZTQ01000033.1 10744 10070 -1 - 675 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229923.peg.775 CDS AZTQ01000033.1 11055 10705 -3 - 351 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229923.peg.776 CDS AZTQ01000033.1 12829 11321 -1 - 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229923.peg.777 CDS AZTQ01000033.1 14047 13040 -1 - 1008 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229923.peg.778 CDS AZTQ01000033.1 14249 14061 -2 - 189 hypothetical protein - none -
fig|6666666.229923.peg.779 CDS AZTQ01000033.1 14308 14991 1 + 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229923.peg.780 CDS AZTQ01000033.1 15004 16725 1 + 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229923.peg.781 CDS AZTQ01000033.1 16758 17405 3 + 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229923.peg.782 CDS AZTQ01000033.1 17422 18114 1 + 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229923.peg.783 CDS AZTQ01000033.1 18297 18992 3 + 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229923.peg.784 CDS AZTQ01000033.1 18999 19502 3 + 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229923.peg.785 CDS AZTQ01000033.1 19502 20146 2 + 645 Substrate-specific component NikM of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229923.peg.786 CDS AZTQ01000033.1 20152 20817 1 + 666 Transmembrane component NikQ of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229923.peg.787 CDS AZTQ01000033.1 20814 21437 3 + 624 ATPase component NikO of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229923.peg.788 CDS AZTQ01000033.1 21517 22329 1 + 813 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229923.peg.789 CDS AZTQ01000033.1 22356 23468 3 + 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229923.peg.790 CDS AZTQ01000033.1 23468 24481 2 + 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229923.peg.791 CDS AZTQ01000033.1 25022 24810 -2 - 213 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229923.peg.792 CDS AZTQ01000034.1 1493 609 -2 - 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.229923.peg.793 CDS AZTQ01000034.1 2735 1668 -2 - 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229923.peg.794 CDS AZTQ01000034.1 3858 2740 -3 - 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229923.peg.795 CDS AZTQ01000034.1 3995 5485 2 + 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229923.peg.796 CDS AZTQ01000034.1 6691 5630 -1 - 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229923.peg.797 CDS AZTQ01000034.1 7406 6678 -2 - 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229923.peg.798 CDS AZTQ01000034.1 8249 7485 -2 - 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229923.peg.799 CDS AZTQ01000034.1 8477 9256 2 + 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229923.peg.800 CDS AZTQ01000034.1 9421 10818 1 + 1398 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229923.peg.801 CDS AZTQ01000034.1 11481 10885 -3 - 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229923.peg.802 CDS AZTQ01000034.1 12518 11490 -2 - 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229923.peg.803 CDS AZTQ01000034.1 13651 12527 -1 - 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229923.peg.804 CDS AZTQ01000034.1 14103 13651 -3 - 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229923.peg.805 CDS AZTQ01000034.1 14063 14239 2 + 177 hypothetical protein - none -
fig|6666666.229923.peg.806 CDS AZTQ01000034.1 15282 14221 -3 - 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229923.peg.807 CDS AZTQ01000034.1 16207 15302 -1 - 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229923.peg.808 CDS AZTQ01000034.1 16669 17688 1 + 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229923.peg.809 CDS AZTQ01000034.1 18055 18795 1 + 741 FIG00698611: hypothetical protein - none -
fig|6666666.229923.peg.810 CDS AZTQ01000034.1 19879 18944 -1 - 936 Malate dehydrogenase (EC 1.1.1.37) TCA Cycle
fig|6666666.229923.peg.811 CDS AZTQ01000035.1 705 85 -3 - 621 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229923.peg.812 CDS AZTQ01000035.1 861 1679 3 + 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229923.peg.813 CDS AZTQ01000035.1 1682 2062 2 + 381 CrcB protein - none -
fig|6666666.229923.peg.814 CDS AZTQ01000035.1 2963 2040 -2 - 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229923.peg.815 CDS AZTQ01000035.1 4101 2956 -3 - 1146 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229923.peg.816 CDS AZTQ01000035.1 4135 4296 1 + 162 hypothetical protein - none -
fig|6666666.229923.peg.817 CDS AZTQ01000035.1 5388 4309 -3 - 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229923.peg.818 CDS AZTQ01000035.1 6617 5454 -2 - 1164 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229923.peg.819 CDS AZTQ01000035.1 7429 6734 -1 - 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229923.peg.820 CDS AZTQ01000035.1 7536 7757 3 + 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229923.peg.821 CDS AZTQ01000035.1 8899 7820 -1 - 1080 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229923.peg.822 CDS AZTQ01000035.1 9085 10452 1 + 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.823 CDS AZTQ01000035.1 14821 10553 -1 - 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229923.peg.824 CDS AZTQ01000035.1 18952 14924 -1 - 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229923.peg.825 CDS AZTQ01000035.1 19594 19223 -1 - 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229923.peg.826 CDS AZTQ01000035.1 20137 19646 -1 - 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229923.peg.827 CDS AZTQ01000035.1 21182 20493 -2 - 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229923.peg.828 CDS AZTQ01000035.1 21615 21187 -3 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229923.peg.829 CDS AZTQ01000035.1 22323 21772 -3 - 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229923.peg.830 CDS AZTQ01000035.1 22735 22325 -1 - 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229923.peg.831 CDS AZTQ01000035.1 23892 23188 -3 - 705 hypothetical protein - none -
fig|6666666.229923.peg.832 CDS AZTQ01000035.1 24369 24067 -3 - 303 hypothetical protein - none -
fig|6666666.229923.peg.833 CDS AZTQ01000035.1 25187 24630 -2 - 558 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229923.peg.834 CDS AZTQ01000035.1 25297 26214 1 + 918 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229923.peg.835 CDS AZTQ01000035.1 26612 26376 -2 - 237 hypothetical protein - none -
fig|6666666.229923.peg.836 CDS AZTQ01000035.1 28340 26676 -2 - 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229923.peg.837 CDS AZTQ01000035.1 29286 28345 -3 - 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229923.peg.838 CDS AZTQ01000035.1 30818 29289 -2 - 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229923.peg.839 CDS AZTQ01000035.1 31424 30885 -2 - 540 ATPases involved in chromosome partitioning - none -
fig|6666666.229923.peg.840 CDS AZTQ01000035.1 32107 31523 -1 - 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229923.peg.841 CDS AZTQ01000035.1 32191 32457 1 + 267 Protein yihD - none -
fig|6666666.229923.peg.842 CDS AZTQ01000035.1 32476 33093 1 + 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229923.peg.843 CDS AZTQ01000035.1 33153 33482 3 + 330 Protein yifE - none -
fig|6666666.229923.peg.844 CDS AZTQ01000035.1 33552 34649 3 + 1098 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) - none -
fig|6666666.229923.peg.845 CDS AZTQ01000035.1 34651 35409 1 + 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229923.peg.846 CDS AZTQ01000035.1 35501 36928 2 + 1428 hypothetical protein - none -
fig|6666666.229923.peg.847 CDS AZTQ01000035.1 37157 39757 2 + 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229923.peg.848 CDS AZTQ01000035.1 40780 39962 -1 - 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229923.peg.849 CDS AZTQ01000035.1 42774 40978 -3 - 1797 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229923.peg.850 CDS AZTQ01000035.1 43515 42823 -3 - 693 Metal-dependent hydrolase - none -
fig|6666666.229923.peg.851 CDS AZTQ01000035.1 44873 43533 -2 - 1341 FIG00782214: hypothetical protein - none -
fig|6666666.229923.peg.852 CDS AZTQ01000035.1 46250 44898 -2 - 1353 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229923.peg.853 CDS AZTQ01000035.1 47115 46339 -3 - 777 Hydroxypyruvate isomerase (EC 5.3.1.22) - none -
fig|6666666.229923.peg.854 CDS AZTQ01000035.1 47750 47118 -2 - 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229923.peg.855 CDS AZTQ01000035.1 48991 47747 -1 - 1245 FIG00641944: hypothetical protein - none -
fig|6666666.229923.peg.856 CDS AZTQ01000035.1 49815 48994 -3 - 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) - none -
fig|6666666.229923.peg.857 CDS AZTQ01000035.1 50090 50848 2 + 759 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229923.peg.858 CDS AZTQ01000035.1 50925 51263 3 + 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229923.peg.859 CDS AZTQ01000035.1 51402 52445 3 + 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229923.peg.860 CDS AZTQ01000035.1 52447 53079 1 + 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229923.peg.861 CDS AZTQ01000035.1 53076 54059 3 + 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229923.peg.862 CDS AZTQ01000035.1 54063 54845 3 + 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229923.peg.863 CDS AZTQ01000035.1 54877 55401 1 + 525 FIG00696143: hypothetical protein - none -
fig|6666666.229923.peg.864 CDS AZTQ01000035.1 55736 55398 -2 - 339 hypothetical protein - none -
fig|6666666.229923.peg.865 CDS AZTQ01000036.1 13 618 1 + 606 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229923.peg.866 CDS AZTQ01000036.1 665 778 2 + 114 hypothetical protein - none -
fig|6666666.229923.peg.867 CDS AZTQ01000036.1 1224 739 -3 - 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229923.peg.868 CDS AZTQ01000036.1 1728 1264 -3 - 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229923.peg.869 CDS AZTQ01000036.1 2515 1730 -1 - 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229923.peg.870 CDS AZTQ01000036.1 2667 3773 3 + 1107 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229923.peg.871 CDS AZTQ01000036.1 4468 3836 -1 - 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229923.peg.872 CDS AZTQ01000036.1 5363 4494 -2 - 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.873 CDS AZTQ01000036.1 5607 6260 3 + 654 Putative lipase in cluster with Phosphatidate cytidylyltransferase CBSS-316407.3.peg.1371;
Triacylglycerol metabolism
fig|6666666.229923.peg.874 CDS AZTQ01000036.1 6264 7346 3 + 1083 Putative lipase in cluster with Phosphatidate cytidylyltransferase CBSS-316407.3.peg.1371;
Triacylglycerol metabolism
fig|6666666.229923.peg.875 CDS AZTQ01000036.1 7348 8664 1 + 1317 Ser/Thr and Tyr protein phosphatase (dual specificity) CBSS-316407.3.peg.1371
fig|6666666.229923.peg.876 CDS AZTQ01000036.1 8751 9116 3 + 366 hypothetical protein - none -
fig|6666666.229923.peg.877 CDS AZTQ01000036.1 9400 9269 -1 - 132 hypothetical protein - none -
fig|6666666.229923.peg.878 CDS AZTQ01000036.1 9449 10063 2 + 615 Biotin synthesis protein BioC Biotin biosynthesis Experimental
fig|6666666.229923.peg.879 CDS AZTQ01000036.1 10163 10687 2 + 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229923.peg.880 CDS AZTQ01000036.1 10704 10874 3 + 171 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.229923.peg.881 CDS AZTQ01000036.1 10901 11920 2 + 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.882 CDS AZTQ01000036.1 11967 12917 3 + 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229923.peg.883 CDS AZTQ01000036.1 13022 13960 2 + 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229923.peg.884 CDS AZTQ01000036.1 13985 14713 2 + 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229923.peg.885 CDS AZTQ01000036.1 14986 15216 1 + 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.886 CDS AZTQ01000036.1 15368 15252 -2 - 117 hypothetical protein - none -
fig|6666666.229923.peg.887 CDS AZTQ01000036.1 15749 16675 2 + 927 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229923.peg.888 CDS AZTQ01000036.1 18036 16798 -3 - 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229923.peg.889 CDS AZTQ01000036.1 18360 19616 3 + 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229923.peg.890 CDS AZTQ01000036.1 19683 19991 3 + 309 Iojap protein - none -
fig|6666666.229923.peg.891 CDS AZTQ01000036.1 19982 20518 2 + 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229923.peg.892 CDS AZTQ01000036.1 20531 22492 2 + 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229923.peg.893 CDS AZTQ01000036.1 22479 23600 3 + 1122 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229923.peg.894 CDS AZTQ01000036.1 23649 24506 3 + 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229923.peg.895 CDS AZTQ01000036.1 24537 25727 3 + 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229923.peg.896 CDS AZTQ01000036.1 25801 26100 1 + 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229923.peg.897 CDS AZTQ01000036.1 26146 26784 1 + 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229923.peg.898 CDS AZTQ01000036.1 26848 27810 1 + 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229923.peg.899 CDS AZTQ01000036.1 29368 27959 -1 - 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229923.peg.900 CDS AZTQ01000036.1 29438 29950 2 + 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229923.peg.901 CDS AZTQ01000036.1 30044 30196 2 + 153 hypothetical protein - none -
fig|6666666.229923.peg.902 CDS AZTQ01000036.1 30189 30491 3 + 303 Phage protein - none -
fig|6666666.229923.peg.903 CDS AZTQ01000036.1 30478 31266 1 + 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229923.peg.904 CDS AZTQ01000036.1 31760 31293 -2 - 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229923.peg.905 CDS AZTQ01000036.1 31794 31919 3 + 126 hypothetical protein - none -
fig|6666666.229923.peg.906 CDS AZTQ01000036.1 32254 32129 -1 - 126 hypothetical protein - none -
fig|6666666.229923.peg.907 CDS AZTQ01000036.1 34636 32510 -1 - 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229923.peg.908 CDS AZTQ01000037.1 156 668 3 + 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229923.peg.909 CDS AZTQ01000037.1 720 1691 3 + 972 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229923.peg.910 CDS AZTQ01000037.1 1691 3046 2 + 1356 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.229923.peg.911 CDS AZTQ01000037.1 3070 4446 1 + 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229923.peg.912 CDS AZTQ01000037.1 4556 4951 2 + 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229923.peg.913 CDS AZTQ01000037.1 5046 5480 3 + 435 Ribonuclease E inhibitor RraB RNA processing and degradation, bacterial
fig|6666666.229923.peg.914 CDS AZTQ01000037.1 5531 6250 2 + 720 probable periplasmic protein NMA1059 - none -
fig|6666666.229923.peg.915 CDS AZTQ01000037.1 6344 6952 2 + 609 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229923.peg.916 CDS AZTQ01000037.1 7241 7023 -2 - 219 hypothetical protein - none -
fig|6666666.229923.peg.917 CDS AZTQ01000037.1 7770 7366 -3 - 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229923.peg.918 CDS AZTQ01000037.1 9226 7895 -1 - 1332 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229923.peg.919 CDS AZTQ01000037.1 9438 9722 3 + 285 hypothetical protein - none -
fig|6666666.229923.peg.920 CDS AZTQ01000037.1 9673 10035 1 + 363 FIG00696564: hypothetical protein - none -
fig|6666666.229923.peg.921 CDS AZTQ01000037.1 10564 10328 -1 - 237 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229923.peg.922 CDS AZTQ01000037.1 10638 11699 3 + 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229923.peg.923 CDS AZTQ01000037.1 12594 11836 -3 - 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229923.peg.924 CDS AZTQ01000037.1 13079 12627 -2 - 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229923.peg.925 CDS AZTQ01000037.1 13245 14237 3 + 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229923.peg.926 CDS AZTQ01000037.1 15279 14293 -3 - 987 tRNA dihydrouridine synthase A - none -
fig|6666666.229923.peg.927 CDS AZTQ01000037.1 16673 15282 -2 - 1392 Chloride channel protein - none -
fig|6666666.229923.peg.928 CDS AZTQ01000037.1 16917 17921 3 + 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229923.peg.929 CDS AZTQ01000037.1 17931 18863 3 + 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229923.peg.930 CDS AZTQ01000037.1 18977 20506 2 + 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229923.peg.931 CDS AZTQ01000037.1 20596 21063 1 + 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229923.peg.932 CDS AZTQ01000037.1 21375 21686 3 + 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229923.peg.933 CDS AZTQ01000037.1 21703 22329 1 + 627 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.229923.peg.934 CDS AZTQ01000037.1 22345 22947 1 + 603 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.229923.peg.935 CDS AZTQ01000037.1 22944 23246 3 + 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.229923.peg.936 CDS AZTQ01000037.1 23267 24088 2 + 822 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.229923.peg.937 CDS AZTQ01000037.1 24242 24388 2 + 147 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229923.peg.938 CDS AZTQ01000037.1 24399 24731 3 + 333 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.229923.peg.939 CDS AZTQ01000037.1 24748 25455 1 + 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229923.peg.940 CDS AZTQ01000037.1 25469 25879 2 + 411 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.229923.peg.941 CDS AZTQ01000037.1 25879 26070 1 + 192 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.229923.peg.942 CDS AZTQ01000037.1 26070 26327 3 + 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229923.peg.943 CDS AZTQ01000037.1 26439 26278 -3 - 162 hypothetical protein - none -
fig|6666666.229923.peg.944 CDS AZTQ01000037.1 26581 26952 1 + 372 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.229923.peg.945 CDS AZTQ01000037.1 26963 27274 2 + 312 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.229923.peg.946 CDS AZTQ01000037.1 27403 27831 1 + 429 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.229923.peg.947 CDS AZTQ01000037.1 27844 28149 1 + 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229923.peg.948 CDS AZTQ01000037.1 28186 28578 1 + 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229923.peg.949 CDS AZTQ01000037.1 28594 29127 1 + 534 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.229923.peg.950 CDS AZTQ01000037.1 29141 29494 2 + 354 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.229923.peg.951 CDS AZTQ01000037.1 29510 30010 2 + 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229923.peg.952 CDS AZTQ01000037.1 30200 30634 2 + 435 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.229923.peg.953 CDS AZTQ01000037.1 30638 31963 2 + 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229923.peg.954 CDS AZTQ01000037.1 31989 32102 3 + 114 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.229923.peg.955 CDS AZTQ01000037.1 32244 32600 3 + 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229923.peg.956 CDS AZTQ01000037.1 32616 33005 3 + 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229923.peg.957 CDS AZTQ01000037.1 33224 33655 2 + 432 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229923.peg.958 CDS AZTQ01000037.1 33684 34673 3 + 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229923.peg.959 CDS AZTQ01000037.1 34715 35104 2 + 390 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.229923.peg.960 CDS AZTQ01000038.1 109 669 1 + 561 Mobile element protein - none -
fig|6666666.229923.peg.961 CDS AZTQ01000039.1 104 778 2 + 675 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.962 CDS AZTQ01000039.1 765 941 3 + 177 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.963 CDS AZTQ01000039.1 1081 3351 1 + 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229923.peg.964 CDS AZTQ01000039.1 3999 5129 3 + 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229923.peg.965 CDS AZTQ01000039.1 5483 5731 2 + 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229923.peg.966 CDS AZTQ01000039.1 5803 5684 -1 - 120 hypothetical protein - none -
fig|6666666.229923.peg.967 CDS AZTQ01000039.1 6655 5843 -1 - 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229923.peg.968 CDS AZTQ01000039.1 7300 6677 -1 - 624 L-lysine permease - none -
fig|6666666.229923.peg.969 CDS AZTQ01000039.1 7800 7300 -3 - 501 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229923.peg.970 CDS AZTQ01000039.1 8793 7810 -3 - 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229923.peg.971 CDS AZTQ01000039.1 9237 8812 -3 - 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229923.peg.972 CDS AZTQ01000039.1 9717 9244 -3 - 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229923.peg.973 CDS AZTQ01000039.1 9963 10847 3 + 885 hypothetical protein - none -
fig|6666666.229923.peg.974 CDS AZTQ01000039.1 12818 11169 -2 - 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229923.peg.975 CDS AZTQ01000039.1 13916 12834 -2 - 1083 Alanine racemase, biosynthetic (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229923.peg.976 CDS AZTQ01000039.1 15346 13940 -1 - 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229923.peg.977 CDS AZTQ01000039.1 15361 15483 1 + 123 hypothetical protein - none -
fig|6666666.229923.peg.978 CDS AZTQ01000039.1 16571 15492 -2 - 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229923.peg.979 CDS AZTQ01000039.1 17922 16672 -3 - 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229923.peg.980 CDS AZTQ01000039.1 18608 17922 -2 - 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229923.peg.981 CDS AZTQ01000039.1 19808 18624 -2 - 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229923.peg.982 CDS AZTQ01000039.1 20073 20207 3 + 135 hypothetical protein - none -
fig|6666666.229923.peg.983 CDS AZTQ01000039.1 20516 20187 -2 - 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229923.peg.984 CDS AZTQ01000039.1 21618 20674 -3 - 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycolate, glyoxylate interconversions
fig|6666666.229923.peg.985 CDS AZTQ01000039.1 22340 21774 -2 - 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229923.peg.986 CDS AZTQ01000039.1 22443 23417 3 + 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229923.peg.987 CDS AZTQ01000039.1 23420 24007 2 + 588 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229923.peg.988 CDS AZTQ01000039.1 25951 24413 -1 - 1539 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229923.peg.989 CDS AZTQ01000039.1 26372 26007 -2 - 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229923.peg.990 CDS AZTQ01000039.1 26496 28535 3 + 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229923.peg.991 CDS AZTQ01000039.1 29161 28661 -1 - 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229923.peg.992 CDS AZTQ01000039.1 30949 29222 -1 - 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229923.peg.993 CDS AZTQ01000039.1 31199 31080 -2 - 120 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229923.peg.994 CDS AZTQ01000040.1 336 76 -3 - 261 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229923.peg.995 CDS AZTQ01000040.1 1976 426 -2 - 1551 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.996 CDS AZTQ01000040.1 2271 2441 3 + 171 hypothetical protein - none -
fig|6666666.229923.peg.997 CDS AZTQ01000040.1 2469 3497 3 + 1029 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229923.peg.998 CDS AZTQ01000040.1 3497 5530 2 + 2034 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229923.peg.999 CDS AZTQ01000040.1 5514 6554 3 + 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Uptake of selenate and selenite
fig|6666666.229923.peg.1000 CDS AZTQ01000040.1 7169 6609 -2 - 561 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229923.peg.1001 CDS AZTQ01000040.1 8759 7170 -2 - 1590 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229923.peg.1002 CDS AZTQ01000041.1 1940 207 -2 - 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229923.peg.1003 CDS AZTQ01000041.1 2061 2624 3 + 564 Protein yecM - none -
fig|6666666.229923.peg.1004 CDS AZTQ01000041.1 2666 3121 2 + 456 Outer membrane lipoprotein - none -
fig|6666666.229923.peg.1005 CDS AZTQ01000041.1 3260 4342 2 + 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229923.peg.1006 CDS AZTQ01000041.1 4386 5285 3 + 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229923.peg.1007 CDS AZTQ01000041.1 5295 6149 3 + 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation;
KDO2-Lipid A biosynthesis
fig|6666666.229923.peg.1008 CDS AZTQ01000041.1 6318 6827 3 + 510 probable lipoprotein NlpC - none -
fig|6666666.229923.peg.1009 CDS AZTQ01000041.1 7432 7220 -1 - 213 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229923.peg.1010 CDS AZTQ01000041.1 7555 8217 1 + 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229923.peg.1011 CDS AZTQ01000041.1 8664 8239 -3 - 426 FIG00696317: hypothetical protein - none -
fig|6666666.229923.peg.1012 CDS AZTQ01000041.1 9354 8887 -3 - 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229923.peg.1013 CDS AZTQ01000041.1 10704 9367 -3 - 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229923.peg.1014 CDS AZTQ01000041.1 11563 10736 -1 - 828 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229923.peg.1015 CDS AZTQ01000041.1 12726 11725 -3 - 1002 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229923.peg.1016 CDS AZTQ01000042.1 61 615 1 + 555 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229923.peg.1017 CDS AZTQ01000042.1 606 725 3 + 120 hypothetical protein - none -
fig|6666666.229923.peg.1018 CDS AZTQ01000042.1 768 1145 3 + 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229923.peg.1019 CDS AZTQ01000042.1 1132 1458 1 + 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229923.peg.1020 CDS AZTQ01000042.1 1471 1701 1 + 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229923.peg.1021 CDS AZTQ01000042.1 1717 2166 1 + 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome LSU bacterial
fig|6666666.229923.peg.1022 CDS AZTQ01000042.1 2392 3510 1 + 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
YrdC-YciO-Sua5 protein family
fig|6666666.229923.peg.1023 CDS AZTQ01000042.1 4649 3567 -2 - 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229923.peg.1024 CDS AZTQ01000042.1 4662 4793 3 + 132 hypothetical protein - none -
fig|6666666.229923.peg.1025 CDS AZTQ01000042.1 6241 4799 -1 - 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229923.peg.1026 CDS AZTQ01000042.1 6531 6262 -3 - 270 hypothetical protein - none -
fig|6666666.229923.peg.1027 CDS AZTQ01000042.1 7312 6575 -1 - 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229923.peg.1028 CDS AZTQ01000042.1 9711 7309 -3 - 2403 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229923.peg.1029 CDS AZTQ01000042.1 9961 11016 1 + 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229923.peg.1030 CDS AZTQ01000042.1 11086 12159 1 + 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229923.peg.1031 CDS AZTQ01000042.1 12159 12647 3 + 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229923.peg.1032 CDS AZTQ01000042.1 13107 12757 -3 - 351 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.229923.peg.1033 CDS AZTQ01000042.1 13882 13133 -1 - 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229923.peg.1034 CDS AZTQ01000042.1 14466 13939 -3 - 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229923.peg.1035 CDS AZTQ01000042.1 14740 14492 -1 - 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229923.peg.1036 CDS AZTQ01000042.1 16515 15229 -3 - 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229923.peg.1037 CDS AZTQ01000042.1 17104 16544 -1 - 561 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229923.peg.1038 CDS AZTQ01000042.1 17263 17589 1 + 327 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229923.peg.1039 CDS AZTQ01000042.1 17883 18458 3 + 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.229923.peg.1040 CDS AZTQ01000042.1 19282 18494 -1 - 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229923.peg.1041 CDS AZTQ01000042.1 19389 20363 3 + 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229923.peg.1042 CDS AZTQ01000042.1 20365 21102 1 + 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229923.peg.1043 CDS AZTQ01000042.1 22391 21234 -2 - 1158 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229923.peg.1044 CDS AZTQ01000042.1 23299 22433 -1 - 867 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229923.peg.1045 CDS AZTQ01000042.1 23986 23327 -1 - 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229923.peg.1046 CDS AZTQ01000042.1 24397 24104 -1 - 294 COG1872 - none -
fig|6666666.229923.peg.1047 CDS AZTQ01000042.1 24981 24421 -3 - 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229923.peg.1048 CDS AZTQ01000042.1 25944 24997 -3 - 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229923.peg.1049 CDS AZTQ01000042.1 27544 26666 -1 - 879 Orf2 - none -
fig|6666666.229923.peg.1050 CDS AZTQ01000042.1 30710 27612 -2 - 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229923.peg.1051 CDS AZTQ01000042.1 31920 30724 -3 - 1197 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229923.peg.1052 CDS AZTQ01000042.1 32512 31946 -1 - 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229923.peg.1053 CDS AZTQ01000042.1 33548 32715 -2 - 834 Cell division protein - none -
fig|6666666.229923.peg.1054 CDS AZTQ01000042.1 35856 33658 -3 - 2199 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229923.peg.1055 CDS AZTQ01000043.1 207 1568 3 + 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229923.peg.1056 CDS AZTQ01000043.1 1579 2679 1 + 1101 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229923.peg.1057 CDS AZTQ01000043.1 2683 3759 1 + 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229923.peg.1058 CDS AZTQ01000043.1 4525 3770 -1 - 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229923.peg.1059 CDS AZTQ01000043.1 4713 5288 3 + 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229923.peg.1060 CDS AZTQ01000043.1 6646 5447 -1 - 1200 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229923.peg.1061 CDS AZTQ01000043.1 7728 6643 -3 - 1086 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229923.peg.1062 CDS AZTQ01000043.1 8255 7725 -2 - 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229923.peg.1063 CDS AZTQ01000043.1 10362 8248 -3 - 2115 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229923.peg.1064 CDS AZTQ01000043.1 11713 10748 -1 - 966 NrfD protein - none -
fig|6666666.229923.peg.1065 CDS AZTQ01000043.1 12387 11710 -3 - 678 NrfC protein - none -
fig|6666666.229923.peg.1066 CDS AZTQ01000043.1 13088 12384 -2 - 705 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229923.peg.1067 CDS AZTQ01000043.1 14634 13111 -3 - 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229923.peg.1068 CDS AZTQ01000043.1 15360 15208 -3 - 153 hypothetical protein - none -
fig|6666666.229923.peg.1069 CDS AZTQ01000043.1 16139 15516 -2 - 624 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229923.peg.1070 CDS AZTQ01000045.1 42 1184 3 + 1143 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229923.peg.1071 CDS AZTQ01000046.1 905 48 -2 - 858 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229923.peg.1072 CDS AZTQ01000046.1 1060 932 -1 - 129 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229923.peg.1073 CDS AZTQ01000046.1 2642 1515 -2 - 1128 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229923.peg.1074 CDS AZTQ01000046.1 3857 2646 -2 - 1212 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229923.peg.1075 CDS AZTQ01000046.1 4158 3841 -3 - 318 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229923.peg.1076 CDS AZTQ01000046.1 5216 4218 -2 - 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229923.peg.1077 CDS AZTQ01000046.1 5474 6793 2 + 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229923.peg.1078 CDS AZTQ01000046.1 6843 8315 3 + 1473 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229923.peg.1079 CDS AZTQ01000046.1 8683 8850 1 + 168 hypothetical protein - none -
fig|6666666.229923.peg.1080 CDS AZTQ01000046.1 8828 8980 2 + 153 hypothetical protein - none -
fig|6666666.229923.peg.1081 CDS AZTQ01000046.1 9017 9262 2 + 246 Huntingtin interacting protein E-like protein - none -
fig|6666666.229923.peg.1082 CDS AZTQ01000046.1 9570 10025 3 + 456 Mobile element protein - none -
fig|6666666.229923.peg.1083 CDS AZTQ01000046.1 10753 10887 1 + 135 hypothetical protein - none -
fig|6666666.229923.peg.1084 CDS AZTQ01000046.1 12956 11361 -2 - 1596 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229923.peg.1085 CDS AZTQ01000047.1 477 298 -3 - 180 hypothetical protein - none -
fig|6666666.229923.peg.1086 CDS AZTQ01000047.1 1823 936 -2 - 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229923.peg.1087 CDS AZTQ01000047.1 3076 1823 -1 - 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229923.peg.1088 CDS AZTQ01000047.1 3891 3172 -3 - 720 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229923.peg.1089 CDS AZTQ01000047.1 5223 3949 -3 - 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229923.peg.1090 CDS AZTQ01000047.1 5718 5335 -3 - 384 hypothetical protein - none -
fig|6666666.229923.peg.1091 CDS AZTQ01000047.1 6690 5746 -3 - 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229923.peg.1092 CDS AZTQ01000047.1 9149 6702 -2 - 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229923.peg.1093 CDS AZTQ01000047.1 9369 9238 -3 - 132 hypothetical protein - none -
fig|6666666.229923.peg.1094 CDS AZTQ01000047.1 9503 10891 2 + 1389 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229923.peg.1095 CDS AZTQ01000047.1 10884 11579 3 + 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229923.peg.1096 CDS AZTQ01000047.1 12464 11628 -2 - 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229923.peg.1097 CDS AZTQ01000047.1 14288 12777 -2 - 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229923.peg.1098 CDS AZTQ01000047.1 15427 14423 -1 - 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229923.peg.1099 CDS AZTQ01000047.1 16433 15540 -2 - 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229923.peg.1100 CDS AZTQ01000047.1 16591 17055 1 + 465 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229923.peg.1101 CDS AZTQ01000047.1 18399 17119 -3 - 1281 Immunoglobulin A1 protease / autotransporter domain, T5aSS type secretion Autotransporter proteins;
Autotransporter proteins
fig|6666666.229923.peg.1102 CDS AZTQ01000048.1 2971 1118 -1 - 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229923.peg.1103 CDS AZTQ01000048.1 3359 4768 2 + 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229923.peg.1104 CDS AZTQ01000048.1 5602 4877 -1 - 726 Integral membrane protein TerC - none -
fig|6666666.229923.peg.1105 CDS AZTQ01000048.1 6335 5667 -2 - 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229923.peg.1106 CDS AZTQ01000048.1 6871 6332 -1 - 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229923.peg.1107 CDS AZTQ01000048.1 8221 6947 -1 - 1275 Long-chain fatty acid transport protein - none -
fig|6666666.229923.peg.1108 CDS AZTQ01000049.1 1458 112 -3 - 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229923.peg.1109 CDS AZTQ01000049.1 1968 1501 -3 - 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229923.peg.1110 CDS AZTQ01000049.1 1985 2137 2 + 153 hypothetical protein - none -
fig|6666666.229923.peg.1111 CDS AZTQ01000049.1 2568 2092 -3 - 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229923.peg.1112 CDS AZTQ01000049.1 3661 2660 -1 - 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229923.peg.1113 CDS AZTQ01000049.1 3971 3642 -2 - 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229923.peg.1114 CDS AZTQ01000049.1 4372 3953 -1 - 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229923.peg.1115 CDS AZTQ01000049.1 5269 4412 -1 - 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229923.peg.1116 CDS AZTQ01000049.1 6173 5382 -2 - 792 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229923.peg.1117 CDS AZTQ01000049.1 6347 6790 2 + 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229923.peg.1118 CDS AZTQ01000049.1 8233 6866 -1 - 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229923.peg.1119 CDS AZTQ01000049.1 8687 8253 -2 - 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229923.peg.1120 CDS AZTQ01000049.1 9260 8700 -2 - 561 Protein of unknown function DUF414 - none -
fig|6666666.229923.peg.1121 CDS AZTQ01000049.1 9852 9361 -3 - 492 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229923.peg.1122 CDS AZTQ01000049.1 11065 10214 -1 - 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229923.peg.1123 CDS AZTQ01000049.1 11859 11062 -3 - 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229923.peg.1124 CDS AZTQ01000049.1 12665 11868 -2 - 798 Protein of unknown function DUF81 - none -
fig|6666666.229923.peg.1125 CDS AZTQ01000049.1 13267 12668 -1 - 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229923.peg.1126 CDS AZTQ01000049.1 13423 13298 -1 - 126 hypothetical protein - none -
fig|6666666.229923.peg.1127 CDS AZTQ01000049.1 13485 13598 3 + 114 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229923.peg.1128 CDS AZTQ01000049.1 13674 13910 3 + 237 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229923.peg.1129 CDS AZTQ01000049.1 13954 14151 1 + 198 hypothetical protein - none -
fig|6666666.229923.peg.1130 CDS AZTQ01000049.1 14103 15035 3 + 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229923.peg.1131 CDS AZTQ01000049.1 15346 15137 -1 - 210 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.229923.peg.1132 CDS AZTQ01000049.1 16468 15845 -1 - 624 FIG00696993: hypothetical protein - none -
fig|6666666.229923.peg.1133 CDS AZTQ01000049.1 16563 16426 -3 - 138 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229923.peg.1134 CDS AZTQ01000049.1 16705 16553 -1 - 153 hypothetical protein - none -
fig|6666666.229923.peg.1135 CDS AZTQ01000049.1 17039 16845 -2 - 195 hypothetical protein - none -
fig|6666666.229923.peg.1136 CDS AZTQ01000049.1 17356 17192 -1 - 165 hypothetical protein - none -
fig|6666666.229923.peg.1137 CDS AZTQ01000049.1 17665 17474 -1 - 192 hypothetical protein - none -
fig|6666666.229923.peg.1138 CDS AZTQ01000049.1 18881 18180 -2 - 702 Phage integrase - none -
fig|6666666.229923.peg.1139 CDS AZTQ01000049.1 21165 19720 -3 - 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229923.peg.1140 CDS AZTQ01000049.1 21852 22640 3 + 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229923.peg.1141 CDS AZTQ01000049.1 22753 24126 1 + 1374 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229923.peg.1142 CDS AZTQ01000049.1 24433 25782 1 + 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229923.peg.1143 CDS AZTQ01000049.1 26047 27501 1 + 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229923.peg.1144 CDS AZTQ01000049.1 28215 28096 -3 - 120 Mobile element protein - none -
fig|6666666.229923.peg.1145 CDS AZTQ01000049.1 28879 28442 -1 - 438 hypothetical protein - none -
fig|6666666.229923.peg.1146 CDS AZTQ01000049.1 32450 28974 -2 - 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229923.peg.1147 CDS AZTQ01000049.1 32648 34435 2 + 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) - none -
fig|6666666.229923.peg.1148 CDS AZTQ01000050.1 543 37 -3 - 507 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229923.peg.1149 CDS AZTQ01000050.1 2912 1650 -2 - 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine Biosynthesis;
YrdC-YciO-Sua5 protein family
fig|6666666.229923.peg.1150 CDS AZTQ01000050.1 3589 3047 -1 - 543 hypothetical protein - none -
fig|6666666.229923.peg.1151 CDS AZTQ01000050.1 4118 3969 -2 - 150 hypothetical protein - none -
fig|6666666.229923.peg.1152 CDS AZTQ01000050.1 5209 4205 -1 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229923.peg.1153 CDS AZTQ01000050.1 5265 5714 3 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229923.peg.1154 CDS AZTQ01000050.1 5724 6167 3 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229923.peg.1155 CDS AZTQ01000050.1 9549 6169 -3 - 3381 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229923.peg.1156 CDS AZTQ01000050.1 9897 9595 -3 - 303 FIG00696353: hypothetical protein - none -
fig|6666666.229923.peg.1157 CDS AZTQ01000050.1 10567 9872 -1 - 696 FIG00696574: hypothetical protein - none -
fig|6666666.229923.peg.1158 CDS AZTQ01000050.1 10836 10564 -3 - 273 Type II secretory pathway, component PulJ - none -
fig|6666666.229923.peg.1159 CDS AZTQ01000050.1 11892 12935 3 + 1044 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229923.peg.1160 CDS AZTQ01000050.1 13829 13362 -2 - 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229923.peg.1161 CDS AZTQ01000050.1 15124 13844 -1 - 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229923.peg.1162 CDS AZTQ01000050.1 16337 15159 -2 - 1179 TolA protein Ton and Tol transport systems
fig|6666666.229923.peg.1163 CDS AZTQ01000050.1 16776 16354 -3 - 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229923.peg.1164 CDS AZTQ01000050.1 17551 16862 -1 - 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229923.peg.1165 CDS AZTQ01000050.1 17985 17581 -3 - 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229923.peg.1166 CDS AZTQ01000050.1 18226 18101 -1 - 126 FIG00362582: hypothetical protein - none -
fig|6666666.229923.peg.1167 CDS AZTQ01000050.1 19639 18503 -1 - 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229923.peg.1168 CDS AZTQ01000050.1 21135 19654 -3 - 1482 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229923.peg.1169 CDS AZTQ01000050.1 21707 21991 2 + 285 Chromosome segregation ATPases - none -
fig|6666666.229923.peg.1170 CDS AZTQ01000050.1 23059 22046 -1 - 1014 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229923.peg.1171 CDS AZTQ01000050.1 23688 23074 -3 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229923.peg.1172 CDS AZTQ01000050.1 24324 23752 -3 - 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229923.peg.1173 CDS AZTQ01000050.1 24790 24380 -1 - 411 excinuclease ABC subunit A - none -
fig|6666666.229923.peg.1174 CDS AZTQ01000050.1 25542 24802 -3 - 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229923.peg.1175 CDS AZTQ01000051.1 249 79 -3 - 171 hypothetical protein - none -
fig|6666666.229923.peg.1176 CDS AZTQ01000051.1 569 351 -2 - 219 hypothetical protein - none -
fig|6666666.229923.peg.1177 CDS AZTQ01000051.1 1331 1017 -2 - 315 hypothetical protein - none -
fig|6666666.229923.peg.1178 CDS AZTQ01000051.1 1356 1475 3 + 120 hypothetical protein - none -
fig|6666666.229923.peg.1179 CDS AZTQ01000052.1 2255 153 -2 - 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229923.peg.1180 CDS AZTQ01000052.1 2842 2372 -1 - 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229923.peg.1181 CDS AZTQ01000052.1 3132 2995 -3 - 138 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229923.peg.1182 CDS AZTQ01000052.1 3356 3601 2 + 246 hypothetical protein - none -
fig|6666666.229923.peg.1183 CDS AZTQ01000052.1 4456 3590 -1 - 867 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229923.peg.1184 CDS AZTQ01000052.1 4477 4635 1 + 159 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229923.peg.1185 CDS AZTQ01000052.1 4668 5549 3 + 882 Protein rarD - none -
fig|6666666.229923.peg.1186 CDS AZTQ01000052.1 6344 5544 -2 - 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229923.peg.1187 CDS AZTQ01000052.1 6899 6348 -2 - 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229923.peg.1188 CDS AZTQ01000052.1 7452 6904 -3 - 549 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229923.peg.1189 CDS AZTQ01000052.1 7451 7621 2 + 171 hypothetical protein - none -
fig|6666666.229923.peg.1190 CDS AZTQ01000053.1 27 1277 3 + 1251 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229923.peg.1191 CDS AZTQ01000053.1 1392 1952 3 + 561 FIG00903983: hypothetical protein - none -
fig|6666666.229923.peg.1192 CDS AZTQ01000053.1 1965 2291 3 + 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229923.peg.1193 CDS AZTQ01000053.1 2616 2302 -3 - 315 Uncharacterized protein PM1437 - none -
fig|6666666.229923.peg.1194 CDS AZTQ01000053.1 2659 3534 1 + 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229923.peg.1195 CDS AZTQ01000053.1 3596 4351 2 + 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229923.peg.1196 CDS AZTQ01000053.1 4675 6147 1 + 1473 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229923.peg.1197 CDS AZTQ01000053.1 6170 7426 2 + 1257 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229923.peg.1198 CDS AZTQ01000053.1 9873 8056 -3 - 1818 ABC transporter ATP-binding protein - none -
fig|6666666.229923.peg.1199 CDS AZTQ01000053.1 9997 11655 1 + 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229923.peg.1200 CDS AZTQ01000053.1 11812 12525 1 + 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229923.peg.1201 CDS AZTQ01000053.1 12593 12736 2 + 144 hypothetical protein - none -
fig|6666666.229923.peg.1202 CDS AZTQ01000053.1 12750 13307 3 + 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229923.peg.1203 CDS AZTQ01000054.1 38 691 2 + 654 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229923.peg.1204 CDS AZTQ01000054.1 713 1432 2 + 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229923.peg.1205 CDS AZTQ01000054.1 1447 2316 1 + 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) CBSS-316407.3.peg.1371;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.1206 CDS AZTQ01000054.1 2325 3659 3 + 1335 Membrane-associated zinc metalloprotease - none -
fig|6666666.229923.peg.1207 CDS AZTQ01000054.1 3678 6089 3 + 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229923.peg.1208 CDS AZTQ01000054.1 6194 6772 2 + 579 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229923.peg.1209 CDS AZTQ01000054.1 6772 7794 1 + 1023 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229923.peg.1210 CDS AZTQ01000054.1 7931 8341 2 + 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229923.peg.1211 CDS AZTQ01000054.1 8362 9150 1 + 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229923.peg.1212 CDS AZTQ01000054.1 9252 9127 -3 - 126 hypothetical protein - none -
fig|6666666.229923.peg.1213 CDS AZTQ01000054.1 9234 10418 3 + 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229923.peg.1214 CDS AZTQ01000054.1 10411 11010 1 + 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229923.peg.1215 CDS AZTQ01000054.1 11050 12918 1 + 1869 Putative transport protein - none -
fig|6666666.229923.peg.1216 CDS AZTQ01000055.1 10 180 1 + 171 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-316407.3.peg.1371;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.1217 CDS AZTQ01000055.1 191 823 2 + 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.1218 CDS AZTQ01000055.1 823 1752 1 + 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) CBSS-316407.3.peg.1371;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.1219 CDS AZTQ01000055.1 1832 2413 2 + 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229923.peg.1220 CDS AZTQ01000056.1 334 1710 1 + 1377 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229923.peg.1221 CDS AZTQ01000056.1 1872 3086 3 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229923.peg.1222 CDS AZTQ01000056.1 3828 3151 -3 - 678 YheO-like PAS domain - none -
fig|6666666.229923.peg.1223 CDS AZTQ01000056.1 4397 3891 -2 - 507 Arabinose efflux permease - none -
fig|6666666.229923.peg.1224 CDS AZTQ01000056.1 5121 4390 -3 - 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229923.peg.1225 CDS AZTQ01000056.1 5232 5975 3 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.1226 CDS AZTQ01000056.1 5983 7395 1 + 1413 Putative cell division protein precursor - none -
fig|6666666.229923.peg.1227 CDS AZTQ01000056.1 8331 7468 -3 - 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229923.peg.1228 CDS AZTQ01000056.1 9213 8473 -3 - 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229923.peg.1229 CDS AZTQ01000057.1 8 865 2 + 858 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229923.peg.1230 CDS AZTQ01000057.1 2986 1094 -1 - 1893 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229923.peg.1231 CDS AZTQ01000057.1 3853 3410 -1 - 444 Flavoprotein MioC Flavodoxin
fig|6666666.229923.peg.1232 CDS AZTQ01000057.1 4129 3911 -1 - 219 FIG074102: hypothetical protein - none -
fig|6666666.229923.peg.1233 CDS AZTQ01000057.1 4443 4297 -3 - 147 hypothetical protein - none -
fig|6666666.229923.peg.1234 CDS AZTQ01000058.1 30 656 3 + 627 Tagatose 1,6-bisphosphate aldolase (EC 4.1.2.40) - none -
fig|6666666.229923.peg.1235 CDS AZTQ01000058.1 670 1962 1 + 1293 Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144) D-Tagatose and Galactitol Utilization
fig|6666666.229923.peg.1236 CDS AZTQ01000058.1 1940 2389 2 + 450 PTS system, galactitol-specific IIA component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229923.peg.1237 CDS AZTQ01000058.1 2408 2692 2 + 285 PTS system, galactitol-specific IIB component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229923.peg.1238 CDS AZTQ01000058.1 2698 3717 1 + 1020 PTS system, galactitol-specific IIC component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229923.peg.1239 CDS AZTQ01000058.1 3708 4043 3 + 336 PTS system, galactitol-specific IIC component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229923.peg.1240 CDS AZTQ01000058.1 4066 5109 1 + 1044 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) D-Tagatose and Galactitol Utilization
fig|6666666.229923.peg.1241 CDS AZTQ01000058.1 5176 5934 1 + 759 Galactitol utilization operon repressor D-Tagatose and Galactitol Utilization
fig|6666666.229923.peg.1242 CDS AZTQ01000059.1 1896 43 -3 - 1854 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229923.peg.1243 CDS AZTQ01000059.1 2872 1982 -1 - 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229923.peg.1244 CDS AZTQ01000059.1 3128 2883 -2 - 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229923.peg.1245 CDS AZTQ01000059.1 3353 4249 2 + 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229923.peg.1246 CDS AZTQ01000059.1 4272 5618 3 + 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229923.peg.1247 CDS AZTQ01000059.1 6125 5682 -2 - 444 transposase - none -
fig|6666666.229923.peg.1248 CDS AZTQ01000059.1 6639 6758 3 + 120 hypothetical protein - none -
fig|6666666.229923.peg.1249 CDS AZTQ01000059.1 7015 7146 1 + 132 hypothetical protein - none -
fig|6666666.229923.peg.1250 CDS AZTQ01000059.1 7401 7195 -3 - 207 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229923.peg.1251 CDS AZTQ01000059.1 8921 7464 -2 - 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.1252 CDS AZTQ01000059.1 9843 8935 -3 - 909 Putative surface protein - none -
fig|6666666.229923.peg.1253 CDS AZTQ01000059.1 9974 10651 2 + 678 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229923.peg.1254 CDS AZTQ01000059.1 10696 11559 1 + 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229923.peg.1255 CDS AZTQ01000059.1 11642 11965 2 + 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229923.peg.1256 CDS AZTQ01000059.1 12171 13625 3 + 1455 Esterase/lipase - none -
fig|6666666.229923.peg.1257 CDS AZTQ01000059.1 15251 13878 -2 - 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229923.peg.1258 CDS AZTQ01000059.1 17261 15327 -2 - 1935 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) Multidrug Resistance Efflux Pumps
fig|6666666.229923.peg.1259 CDS AZTQ01000059.1 18459 17281 -3 - 1179 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229923.peg.1260 CDS AZTQ01000059.1 18660 20351 3 + 1692 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229923.peg.1261 CDS AZTQ01000059.1 20606 20749 2 + 144 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229923.peg.1262 CDS AZTQ01000059.1 20759 21055 2 + 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229923.peg.1263 CDS AZTQ01000059.1 21123 21557 3 + 435 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229923.peg.1264 CDS AZTQ01000059.1 21657 22205 3 + 549 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229923.peg.1265 CDS AZTQ01000059.1 22218 24413 3 + 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229923.peg.1266 CDS AZTQ01000059.1 24410 26419 2 + 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229923.peg.1267 CDS AZTQ01000059.1 26446 27756 1 + 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229923.peg.1268 CDS AZTQ01000059.1 27963 29402 3 + 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229923.peg.1269 CDS AZTQ01000059.1 29526 31991 3 + 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229923.peg.1270 CDS AZTQ01000059.1 32155 32006 -1 - 150 hypothetical protein - none -
fig|6666666.229923.peg.1271 CDS AZTQ01000059.1 32714 32109 -2 - 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229923.peg.1272 CDS AZTQ01000059.1 32928 33215 3 + 288 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.229923.peg.1273 CDS AZTQ01000059.1 33454 33254 -1 - 201 hypothetical protein - none -
fig|6666666.229923.peg.1274 CDS AZTQ01000060.1 49 405 1 + 357 lipoprotein HlpB - none -
fig|6666666.229923.peg.1275 CDS AZTQ01000060.1 552 1433 3 + 882 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229923.peg.1276 CDS AZTQ01000060.1 1611 2939 3 + 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229923.peg.1277 CDS AZTQ01000060.1 3043 6504 1 + 3462 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229923.peg.1278 CDS AZTQ01000060.1 6525 7265 3 + 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229923.peg.1279 CDS AZTQ01000060.1 7265 11755 2 + 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229923.peg.1280 CDS AZTQ01000060.1 11832 12785 3 + 954 Integral membrane protein - none -
fig|6666666.229923.peg.1281 CDS AZTQ01000060.1 12797 14224 2 + 1428 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229923.peg.1282 CDS AZTQ01000060.1 15119 15604 2 + 486 Ferritin-like protein 2 - none -
fig|6666666.229923.peg.1283 CDS AZTQ01000060.1 15622 16119 1 + 498 Ferritin-like protein 2 - none -
fig|6666666.229923.peg.1284 CDS AZTQ01000060.1 16348 16181 -1 - 168 hypothetical protein - none -
fig|6666666.229923.peg.1285 CDS AZTQ01000061.1 150 512 3 + 363 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229923.peg.1286 CDS AZTQ01000061.1 571 1188 1 + 618 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229923.peg.1287 CDS AZTQ01000061.1 1302 1679 3 + 378 FIG048548: ATP synthase protein I2 - none -
fig|6666666.229923.peg.1288 CDS AZTQ01000061.1 1704 2492 3 + 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229923.peg.1289 CDS AZTQ01000061.1 2546 2800 2 + 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) - none -
fig|6666666.229923.peg.1290 CDS AZTQ01000061.1 2850 3320 3 + 471 ATP synthase F0 sector subunit b - none -
fig|6666666.229923.peg.1291 CDS AZTQ01000061.1 3334 3882 1 + 549 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229923.peg.1292 CDS AZTQ01000061.1 3895 5436 1 + 1542 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229923.peg.1293 CDS AZTQ01000061.1 5452 6321 1 + 870 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229923.peg.1294 CDS AZTQ01000061.1 6338 7711 2 + 1374 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229923.peg.1295 CDS AZTQ01000061.1 7753 8181 1 + 429 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.229923.peg.1296 CDS AZTQ01000061.1 9295 8249 -1 - 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229923.peg.1297 CDS AZTQ01000061.1 9300 9452 3 + 153 hypothetical protein - none -
fig|6666666.229923.peg.1298 CDS AZTQ01000061.1 9600 10109 3 + 510 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.1299 CDS AZTQ01000061.1 10113 12056 3 + 1944 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.1300 CDS AZTQ01000061.1 12093 12602 3 + 510 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.1301 CDS AZTQ01000062.1 1034 42 -2 - 993 Mobile element protein - none -
fig|6666666.229923.peg.1302 CDS AZTQ01000063.1 59 3124 2 + 3066 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229923.peg.1303 CDS AZTQ01000063.1 3193 5316 1 + 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229923.peg.1304 CDS AZTQ01000063.1 5331 6764 3 + 1434 RTX toxin transporter, determinant D # Leukotoxin secretion protein D - none -
fig|6666666.229923.peg.1305 CDS AZTQ01000063.1 7174 9054 1 + 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229923.peg.1306 CDS AZTQ01000063.1 9132 10280 3 + 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229923.peg.1307 CDS AZTQ01000063.1 10355 10867 2 + 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229923.peg.1308 CDS AZTQ01000063.1 11982 10972 -3 - 1011 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229923.peg.1309 CDS AZTQ01000063.1 12881 11985 -2 - 897 Inosose dehydratase (EC 4.2.1.44) Inositol catabolism
fig|6666666.229923.peg.1310 CDS AZTQ01000063.1 14883 12937 -3 - 1947 Epi-inositol hydrolase (EC 3.7.1.-) Inositol catabolism
fig|6666666.229923.peg.1311 CDS AZTQ01000063.1 15192 17099 3 + 1908 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain Inositol catabolism;
Inositol catabolism
fig|6666666.229923.peg.1312 CDS AZTQ01000063.1 17971 17138 -1 - 834 Predicted transcriptional regulator of the myo-inositol catabolic operon Inositol catabolism
fig|6666666.229923.peg.1313 CDS AZTQ01000063.1 18926 18096 -2 - 831 5-deoxy-glucuronate isomerase (EC 5.3.1.-) Inositol catabolism
fig|6666666.229923.peg.1314 CDS AZTQ01000063.1 19189 19992 1 + 804 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229923.peg.1315 CDS AZTQ01000063.1 20010 21353 3 + 1344 putative hexose phosphate transport protein - none -
fig|6666666.229923.peg.1316 CDS AZTQ01000063.1 21591 23099 3 + 1509 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) Inositol catabolism
fig|6666666.229923.peg.1317 CDS AZTQ01000064.1 76 675 1 + 600 unknown - none -
fig|6666666.229923.peg.1318 CDS AZTQ01000064.1 679 2601 1 + 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229923.peg.1319 CDS AZTQ01000064.1 2643 2816 3 + 174 hypothetical protein - none -
fig|6666666.229923.peg.1320 CDS AZTQ01000064.1 2944 6414 1 + 3471 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229923.peg.1321 CDS AZTQ01000064.1 6503 7087 2 + 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229923.peg.1322 CDS AZTQ01000064.1 7249 7962 1 + 714 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229923.peg.1323 CDS AZTQ01000064.1 7983 8702 3 + 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229923.peg.1324 CDS AZTQ01000064.1 8707 9369 1 + 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229923.peg.1325 CDS AZTQ01000064.1 9372 10055 3 + 684 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229923.peg.1326 CDS AZTQ01000064.1 10596 12194 3 + 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229923.peg.1327 CDS AZTQ01000064.1 12456 12914 3 + 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229923.peg.1328 CDS AZTQ01000064.1 13024 13992 1 + 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229923.peg.1329 CDS AZTQ01000064.1 13992 14309 3 + 318 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229923.peg.1330 CDS AZTQ01000064.1 14327 16150 2 + 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229923.peg.1331 CDS AZTQ01000064.1 16168 17634 1 + 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229923.peg.1332 CDS AZTQ01000064.1 17642 19021 2 + 1380 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229923.peg.1333 CDS AZTQ01000064.1 19015 20100 1 + 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229923.peg.1334 CDS AZTQ01000064.1 20127 21431 3 + 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229923.peg.1335 CDS AZTQ01000064.1 21446 22636 2 + 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229923.peg.1336 CDS AZTQ01000064.1 22676 23740 2 + 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229923.peg.1337 CDS AZTQ01000064.1 23811 25241 3 + 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229923.peg.1338 CDS AZTQ01000064.1 25254 26183 3 + 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229923.peg.1339 CDS AZTQ01000064.1 26180 26947 2 + 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229923.peg.1340 CDS AZTQ01000064.1 26972 28252 2 + 1281 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229923.peg.1341 CDS AZTQ01000064.1 28338 29615 3 + 1278 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229923.peg.1342 CDS AZTQ01000064.1 29653 30570 1 + 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) KDO2-Lipid A biosynthesis
fig|6666666.229923.peg.1343 CDS AZTQ01000064.1 30772 31935 1 + 1164 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229923.peg.1344 CDS AZTQ01000064.1 32069 33949 2 + 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229923.peg.1345 CDS AZTQ01000064.1 34017 34361 3 + 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352
fig|6666666.229923.peg.1346 CDS AZTQ01000064.1 34389 35522 3 + 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229923.peg.1347 CDS AZTQ01000064.1 35524 36204 1 + 681 FIG009095: D,D-carboxypeptidase family protein CBSS-584.1.peg.1352
fig|6666666.229923.peg.1348 CDS AZTQ01000064.1 36451 37074 1 + 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229923.peg.1349 CDS AZTQ01000064.1 37125 37949 3 + 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229923.peg.1350 CDS AZTQ01000064.1 39239 38412 -2 - 828 FIG00711691: hypothetical protein - none -
fig|6666666.229923.peg.1351 CDS AZTQ01000064.1 39676 39212 -1 - 465 FIG00710847: hypothetical protein - none -
fig|6666666.229923.peg.1352 CDS AZTQ01000064.1 39992 39855 -2 - 138 hypothetical protein - none -
fig|6666666.229923.peg.1353 CDS AZTQ01000064.1 40012 40710 1 + 699 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229923.peg.1354 CDS AZTQ01000064.1 40835 42049 2 + 1215 ATPase component BioM of energizing module of biotin ECF transporter ECF class transporters
fig|6666666.229923.peg.1355 CDS AZTQ01000064.1 43162 42134 -1 - 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.1356 CDS AZTQ01000064.1 43368 43502 3 + 135 hypothetical protein - none -
fig|6666666.229923.peg.1357 CDS AZTQ01000064.1 43581 45743 3 + 2163 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229923.peg.1358 CDS AZTQ01000064.1 46186 45842 -1 - 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229923.peg.1359 CDS AZTQ01000064.1 46588 46196 -1 - 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229923.peg.1360 CDS AZTQ01000064.1 47370 46600 -3 - 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229923.peg.1361 CDS AZTQ01000064.1 49183 47375 -1 - 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.229923.peg.1362 CDS AZTQ01000064.1 49494 50465 3 + 972 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229923.peg.1363 CDS AZTQ01000064.1 50700 50521 -3 - 180 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229923.peg.1364 CDS AZTQ01000064.1 51912 50842 -3 - 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229923.peg.1365 CDS AZTQ01000064.1 51911 52426 2 + 516 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229923.peg.1366 CDS AZTQ01000064.1 52511 53113 2 + 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229923.peg.1367 CDS AZTQ01000064.1 53145 55082 3 + 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229923.peg.1368 CDS AZTQ01000064.1 55255 55593 1 + 339 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.229923.peg.1369 CDS AZTQ01000064.1 55778 56032 2 + 255 hypothetical protein - none -
fig|6666666.229923.peg.1370 CDS AZTQ01000064.1 57506 56343 -2 - 1164 Na+/H+ antiporter NhaA type NhaA, NhaD and Sodium-dependent phosphate transporters
fig|6666666.229923.peg.1371 CDS AZTQ01000064.1 58452 57679 -3 - 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229923.peg.1372 CDS AZTQ01000064.1 58738 58430 -1 - 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229923.peg.1373 CDS AZTQ01000064.1 60993 58771 -3 - 2223 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229923.peg.1374 CDS AZTQ01000064.1 61823 61527 -2 - 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229923.peg.1375 CDS AZTQ01000064.1 62296 61826 -1 - 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229923.peg.1376 CDS AZTQ01000064.1 62851 62300 -1 - 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229923.peg.1377 CDS AZTQ01000064.1 63615 62857 -3 - 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229923.peg.1378 CDS AZTQ01000064.1 63883 64530 1 + 648 Outer membrane protein W precursor - none -
fig|6666666.229923.peg.1379 CDS AZTQ01000064.1 66272 64593 -2 - 1680 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229923.peg.1380 CDS AZTQ01000064.1 67263 66346 -3 - 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229923.peg.1381 CDS AZTQ01000064.1 67436 67308 -2 - 129 hypothetical protein - none -
fig|6666666.229923.peg.1382 CDS AZTQ01000064.1 67404 67982 3 + 579 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229923.peg.1383 CDS AZTQ01000064.1 71171 68094 -2 - 3078 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229923.peg.1384 CDS AZTQ01000064.1 73382 71364 -2 - 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229923.peg.1385 CDS AZTQ01000064.1 73552 74772 1 + 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229923.peg.1386 CDS AZTQ01000064.1 74887 74753 -1 - 135 hypothetical protein - none -
fig|6666666.229923.peg.1387 CDS AZTQ01000064.1 74913 76760 3 + 1848 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229923.peg.1388 CDS AZTQ01000064.1 77844 76834 -3 - 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229923.peg.1389 CDS AZTQ01000064.1 79401 77863 -3 - 1539 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229923.peg.1390 CDS AZTQ01000064.1 80468 79476 -2 - 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229923.peg.1391 CDS AZTQ01000064.1 81695 80682 -2 - 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229923.peg.1392 CDS AZTQ01000065.1 46 1038 1 + 993 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229923.peg.1393 CDS AZTQ01000066.1 117 1343 3 + 1227 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229923.peg.1394 CDS AZTQ01000066.1 1468 1337 -1 - 132 hypothetical protein - none -
fig|6666666.229923.peg.1395 CDS AZTQ01000066.1 1457 2584 2 + 1128 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229923.peg.1396 CDS AZTQ01000067.1 26 211 2 + 186 hypothetical protein - none -
fig|6666666.229923.peg.1397 CDS AZTQ01000067.1 464 1210 2 + 747 hypothetical protein - none -
fig|6666666.229923.peg.1398 CDS AZTQ01000067.1 1594 1469 -1 - 126 hypothetical protein - none -
fig|6666666.229923.peg.1399 CDS AZTQ01000067.1 2092 2232 1 + 141 hypothetical protein - none -
fig|6666666.229923.peg.1400 CDS AZTQ01000067.1 2367 4787 3 + 2421 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.5.3) - none -
fig|6666666.229923.peg.1401 CDS AZTQ01000067.1 4798 5415 1 + 618 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3) - none -
fig|6666666.229923.peg.1402 CDS AZTQ01000067.1 5417 6256 2 + 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.5.3) - none -
fig|6666666.229923.peg.1403 CDS AZTQ01000067.1 6257 6919 2 + 663 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229923.peg.1404 CDS AZTQ01000067.1 6934 7167 1 + 234 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229923.peg.1405 CDS AZTQ01000067.1 7286 8191 2 + 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229923.peg.1406 CDS AZTQ01000067.1 8241 8501 3 + 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229923.peg.1407 CDS AZTQ01000068.1 54 899 3 + 846 O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-) - none -
fig|6666666.229923.peg.1408 CDS AZTQ01000068.1 862 2280 1 + 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229923.peg.1409 CDS AZTQ01000068.1 2827 3630 1 + 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229923.peg.1410 CDS AZTQ01000068.1 3630 4424 3 + 795 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229923.peg.1411 CDS AZTQ01000068.1 4449 5108 3 + 660 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229923.peg.1412 CDS AZTQ01000068.1 5130 5477 3 + 348 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229923.peg.1413 CDS AZTQ01000068.1 6295 5555 -1 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229923.peg.1414 CDS AZTQ01000068.1 7220 6567 -2 - 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229923.peg.1415 CDS AZTQ01000068.1 7309 8037 1 + 729 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229923.peg.1416 CDS AZTQ01000068.1 8088 9002 3 + 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229923.peg.1417 CDS AZTQ01000068.1 9643 9059 -1 - 585 Putative lipoprotein yceB precursor - none -
fig|6666666.229923.peg.1418 CDS AZTQ01000068.1 9806 10366 2 + 561 unknown - none -
fig|6666666.229923.peg.1419 CDS AZTQ01000068.1 10387 11172 1 + 786 serine/threonine protein kinase - none -
fig|6666666.229923.peg.1420 CDS AZTQ01000068.1 11169 11297 3 + 129 hypothetical protein - none -
fig|6666666.229923.peg.1421 CDS AZTQ01000068.1 12378 11512 -3 - 867 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.229923.peg.1422 CDS AZTQ01000068.1 14368 12638 -1 - 1731 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229923.peg.1423 CDS AZTQ01000068.1 16131 14368 -3 - 1764 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229923.peg.1424 CDS AZTQ01000068.1 17188 16235 -1 - 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229923.peg.1425 CDS AZTQ01000068.1 18104 17247 -2 - 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229923.peg.1426 CDS AZTQ01000068.1 18408 18280 -3 - 129 hypothetical protein - none -
fig|6666666.229923.peg.1427 CDS AZTQ01000068.1 19256 18435 -2 - 822 Aldose 1-epimerase - none -
fig|6666666.229923.peg.1428 CDS AZTQ01000068.1 19333 21249 1 + 1917 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229923.peg.1429 CDS AZTQ01000068.1 21271 21993 1 + 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229923.peg.1430 CDS AZTQ01000068.1 22025 22582 2 + 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229923.peg.1431 CDS AZTQ01000068.1 22624 24312 1 + 1689 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) - none -
fig|6666666.229923.peg.1432 CDS AZTQ01000068.1 24379 25536 1 + 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229923.peg.1433 CDS AZTQ01000068.1 26919 25624 -3 - 1296 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229923.peg.1434 CDS AZTQ01000069.1 1293 241 -3 - 1053 Peptide transport system ATP-binding protein SapD - none -
fig|6666666.229923.peg.1435 CDS AZTQ01000069.1 2188 1301 -1 - 888 Peptide transport system permease protein SapC - none -
fig|6666666.229923.peg.1436 CDS AZTQ01000069.1 3143 2178 -2 - 966 Peptide transport system permease protein SapB - none -
fig|6666666.229923.peg.1437 CDS AZTQ01000069.1 4834 3143 -1 - 1692 Peptide transport periplasmic protein sapA (TC 3.A.1.5.5) - none -
fig|6666666.229923.peg.1438 CDS AZTQ01000069.1 5050 6456 1 + 1407 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229923.peg.1439 CDS AZTQ01000069.1 6470 7549 2 + 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229923.peg.1440 CDS AZTQ01000069.1 7626 8585 3 + 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229923.peg.1441 CDS AZTQ01000069.1 8934 8776 -3 - 159 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229923.peg.1442 CDS AZTQ01000069.1 9245 8949 -2 - 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229923.peg.1443 CDS AZTQ01000069.1 10309 9365 -1 - 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229923.peg.1444 CDS AZTQ01000069.1 12175 10313 -1 - 1863 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229923.peg.1445 CDS AZTQ01000069.1 13659 12175 -3 - 1485 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229923.peg.1446 CDS AZTQ01000069.1 14108 13656 -2 - 453 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229923.peg.1447 CDS AZTQ01000070.1 715 4974 1 + 4260 Autotransporter adhesin - none -
fig|6666666.229923.peg.1448 CDS AZTQ01000070.1 5039 6172 2 + 1134 Autotransporter adhesin - none -
fig|6666666.229923.peg.1449 CDS AZTQ01000071.1 1098 685 -3 - 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229923.peg.1450 CDS AZTQ01000071.1 2189 1164 -2 - 1026 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229923.peg.1451 CDS AZTQ01000071.1 2283 2540 3 + 258 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229923.peg.1452 CDS AZTQ01000071.1 2545 4284 1 + 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229923.peg.1453 CDS AZTQ01000071.1 4543 5532 1 + 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229923.peg.1454 CDS AZTQ01000071.1 6423 5629 -3 - 795 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229923.peg.1455 CDS AZTQ01000071.1 6605 7030 2 + 426 Universal stress protein A Universal stress protein family
fig|6666666.229923.peg.1456 CDS AZTQ01000071.1 7311 9854 3 + 2544 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229923.peg.1457 CDS AZTQ01000071.1 9977 10159 2 + 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229923.peg.1458 CDS AZTQ01000071.1 10191 11555 3 + 1365 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229923.peg.1459 CDS AZTQ01000071.1 11631 12518 3 + 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229923.peg.1460 CDS AZTQ01000071.1 12672 12989 3 + 318 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229923.peg.1461 CDS AZTQ01000071.1 13063 13797 1 + 735 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229923.peg.1462 CDS AZTQ01000071.1 13815 14372 3 + 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229923.peg.1463 CDS AZTQ01000071.1 14372 14791 2 + 420 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.229923.peg.1464 CDS AZTQ01000071.1 16197 14887 -3 - 1311 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229923.peg.1465 CDS AZTQ01000071.1 16382 16266 -2 - 117 hypothetical protein - none -
fig|6666666.229923.peg.1466 CDS AZTQ01000071.1 16614 16435 -3 - 180 hypothetical protein - none -
fig|6666666.229923.peg.1467 CDS AZTQ01000071.1 17993 16842 -2 - 1152 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229923.peg.1468 CDS AZTQ01000071.1 18512 18255 -2 - 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.1469 CDS AZTQ01000071.1 19679 18591 -2 - 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229923.peg.1470 CDS AZTQ01000071.1 19733 19849 2 + 117 hypothetical protein - none -
fig|6666666.229923.peg.1471 CDS AZTQ01000071.1 21064 19829 -1 - 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.1472 CDS AZTQ01000071.1 21672 21076 -3 - 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.1473 CDS AZTQ01000071.1 22305 21676 -3 - 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.1474 CDS AZTQ01000071.1 23090 22305 -2 - 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.1475 CDS AZTQ01000071.1 24318 23083 -3 - 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.1476 CDS AZTQ01000071.1 25661 24321 -2 - 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.1477 CDS AZTQ01000071.1 26327 26016 -2 - 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229923.peg.1478 CDS AZTQ01000071.1 26431 27024 1 + 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229923.peg.1479 CDS AZTQ01000071.1 28650 27568 -3 - 1083 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229923.peg.1480 CDS AZTQ01000071.1 28925 28647 -2 - 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229923.peg.1481 CDS AZTQ01000071.1 30093 28903 -3 - 1191 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229923.peg.1482 CDS AZTQ01000071.1 30258 31025 3 + 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229923.peg.1483 CDS AZTQ01000071.1 31057 31398 1 + 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229923.peg.1484 CDS AZTQ01000071.1 31618 32616 1 + 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229923.peg.1485 CDS AZTQ01000071.1 32707 34227 1 + 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229923.peg.1486 CDS AZTQ01000071.1 34243 35301 1 + 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229923.peg.1487 CDS AZTQ01000071.1 36291 35287 -3 - 1005 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229923.peg.1488 CDS AZTQ01000071.1 37170 36295 -3 - 876 DnaJ-like protein DjlA - none -
fig|6666666.229923.peg.1489 CDS AZTQ01000071.1 37896 37252 -3 - 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229923.peg.1490 CDS AZTQ01000071.1 38622 37906 -3 - 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229923.peg.1491 CDS AZTQ01000071.1 38740 39603 1 + 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229923.peg.1492 CDS AZTQ01000071.1 39631 40515 1 + 885 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229923.peg.1493 CDS AZTQ01000071.1 40512 40772 3 + 261 hypothetical protein - none -
fig|6666666.229923.peg.1494 CDS AZTQ01000071.1 40924 41646 1 + 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229923.peg.1495 CDS AZTQ01000071.1 41803 42651 1 + 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229923.peg.1496 CDS AZTQ01000071.1 43268 43954 2 + 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229923.peg.1497 CDS AZTQ01000071.1 43956 45272 3 + 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229923.peg.1498 CDS AZTQ01000071.1 45282 47513 3 + 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229923.peg.1499 CDS AZTQ01000071.1 47543 47899 2 + 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229923.peg.1500 CDS AZTQ01000071.1 47952 48575 3 + 624 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229923.peg.1501 CDS AZTQ01000071.1 48956 49099 2 + 144 hypothetical protein - none -
fig|6666666.229923.peg.1502 CDS AZTQ01000071.1 49110 49229 3 + 120 Integral membrane protein - none -
fig|6666666.229923.peg.1503 CDS AZTQ01000071.1 50528 49479 -2 - 1050 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229923.peg.1504 CDS AZTQ01000071.1 52129 50711 -1 - 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229923.peg.1505 CDS AZTQ01000071.1 52360 52842 1 + 483 FxsA protein - none -
fig|6666666.229923.peg.1506 CDS AZTQ01000071.1 52928 53218 2 + 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229923.peg.1507 CDS AZTQ01000071.1 53339 54982 2 + 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229923.peg.1508 CDS AZTQ01000071.1 55929 55072 -3 - 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines
fig|6666666.229923.peg.1509 CDS AZTQ01000071.1 57489 57370 -3 - 120 hypothetical protein - none -
fig|6666666.229923.peg.1510 CDS AZTQ01000071.1 57994 57842 -1 - 153 Mobile element protein - none -
fig|6666666.229923.peg.1511 CDS AZTQ01000071.1 58210 58524 1 + 315 Peptide transport system ATP-binding protein SapD - none -
fig|6666666.229923.peg.1512 CDS AZTQ01000072.1 78 1415 3 + 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229923.peg.1513 CDS AZTQ01000072.1 1609 1854 1 + 246 FIG00696862: hypothetical protein - none -
fig|6666666.229923.peg.1514 CDS AZTQ01000072.1 2088 3857 3 + 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229923.peg.1515 CDS AZTQ01000072.1 5321 3945 -2 - 1377 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229923.peg.1516 CDS AZTQ01000072.1 5979 5299 -3 - 681 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229923.peg.1517 CDS AZTQ01000072.1 6595 6179 -1 - 417 Protein ygiW precursor - none -
fig|6666666.229923.peg.1518 CDS AZTQ01000072.1 6969 7886 3 + 918 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229923.peg.1519 CDS AZTQ01000072.1 9941 7965 -2 - 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229923.peg.1520 CDS AZTQ01000072.1 10167 11066 3 + 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229923.peg.1521 CDS AZTQ01000072.1 11126 12091 2 + 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229923.peg.1522 CDS AZTQ01000072.1 12099 13022 3 + 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229923.peg.1523 CDS AZTQ01000072.1 13034 13792 2 + 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229923.peg.1524 CDS AZTQ01000072.1 15342 13912 -3 - 1431 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229923.peg.1525 CDS AZTQ01000073.1 1759 2343 1 + 585 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229923.peg.1526 CDS AZTQ01000073.1 2395 3486 1 + 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229923.peg.1527 CDS AZTQ01000073.1 3824 4405 2 + 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229923.peg.1528 CDS AZTQ01000073.1 4515 4637 3 + 123 hypothetical protein - none -
fig|6666666.229923.peg.1529 CDS AZTQ01000073.1 5805 4858 -3 - 948 Cysteine synthase (EC 2.5.1.47) Methionine Biosynthesis
fig|6666666.229923.peg.1530 CDS AZTQ01000073.1 6731 5907 -2 - 825 Sulfate transporter, CysZ-type - none -
fig|6666666.229923.peg.1531 CDS AZTQ01000073.1 6872 7912 2 + 1041 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229923.peg.1532 CDS AZTQ01000073.1 8017 10032 1 + 2016 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229923.peg.1533 CDS AZTQ01000073.1 10679 10101 -2 - 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229923.peg.1534 CDS AZTQ01000073.1 10915 10682 -1 - 234 unknown - none -
fig|6666666.229923.peg.1535 CDS AZTQ01000073.1 12008 10980 -2 - 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ;
YrdC-YciO-Sua5 protein family
fig|6666666.229923.peg.1536 CDS AZTQ01000073.1 12199 12032 -1 - 168 hypothetical protein - none -
fig|6666666.229923.peg.1537 CDS AZTQ01000073.1 12234 12449 3 + 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229923.peg.1538 CDS AZTQ01000073.1 12571 14328 1 + 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229923.peg.1539 CDS AZTQ01000073.1 14404 16254 1 + 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229923.peg.1540 CDS AZTQ01000073.1 16661 16464 -2 - 198 Mobile element protein - none -
fig|6666666.229923.peg.1541 CDS AZTQ01000073.1 19454 17037 -2 - 2418 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229923.peg.1542 CDS AZTQ01000074.1 860 1408 2 + 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229923.peg.1543 CDS AZTQ01000075.1 261 1907 3 + 1647 ABC transporter ATP-binding protein - none -
fig|6666666.229923.peg.1544 CDS AZTQ01000075.1 2897 2010 -2 - 888 putative adhesin/invasin - none -
fig|6666666.229923.peg.1545 CDS AZTQ01000076.1 1296 106 -3 - 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229923.peg.1546 CDS AZTQ01000076.1 1503 1628 3 + 126 hypothetical protein - none -
fig|6666666.229923.peg.1547 CDS AZTQ01000076.1 1719 4328 3 + 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229923.peg.1548 CDS AZTQ01000076.1 4401 5420 3 + 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229923.peg.1549 CDS AZTQ01000076.1 5421 6269 3 + 849 COG0613, Predicted metal-dependent phosphoesterases (PHP family) YrdC-YciO-Sua5 protein family;
tRNA modification Bacteria
fig|6666666.229923.peg.1550 CDS AZTQ01000076.1 7209 6313 -3 - 897 Transcriptional regulator - none -
fig|6666666.229923.peg.1551 CDS AZTQ01000076.1 7308 9914 3 + 2607 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229923.peg.1552 CDS AZTQ01000076.1 10836 10000 -3 - 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229923.peg.1553 CDS AZTQ01000076.1 11896 10964 -1 - 933 Universal stress protein E Universal stress protein family
fig|6666666.229923.peg.1554 CDS AZTQ01000076.1 12500 12015 -2 - 486 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229923.peg.1555 CDS AZTQ01000077.1 2142 898 -3 - 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1556 CDS AZTQ01000077.1 2903 2175 -2 - 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1557 CDS AZTQ01000077.1 3396 2953 -3 - 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1558 CDS AZTQ01000077.1 4612 3389 -1 - 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1559 CDS AZTQ01000077.1 5184 4621 -3 - 564 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1560 CDS AZTQ01000077.1 7503 5230 -3 - 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1561 CDS AZTQ01000077.1 8094 7510 -3 - 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1562 CDS AZTQ01000077.1 8537 8091 -2 - 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1563 CDS AZTQ01000077.1 9460 8534 -1 - 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1564 CDS AZTQ01000077.1 10179 9457 -3 - 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1565 CDS AZTQ01000077.1 11540 10179 -2 - 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1566 CDS AZTQ01000077.1 12082 11537 -1 - 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1567 CDS AZTQ01000077.1 13775 12108 -2 - 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1568 CDS AZTQ01000077.1 14026 13775 -1 - 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1569 CDS AZTQ01000077.1 14292 14029 -3 - 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1570 CDS AZTQ01000077.1 15052 14270 -1 - 783 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1571 CDS AZTQ01000077.1 15780 15037 -3 - 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229923.peg.1572 CDS AZTQ01000077.1 15918 15787 -3 - 132 hypothetical protein - none -
fig|6666666.229923.peg.1573 CDS AZTQ01000077.1 16081 16506 1 + 426 Excinuclease ATPase subunit - none -
fig|6666666.229923.peg.1574 CDS AZTQ01000077.1 17313 16600 -3 - 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229923.peg.1575 CDS AZTQ01000077.1 18218 17328 -2 - 891 Tyrosine recombinase XerC - none -
fig|6666666.229923.peg.1576 CDS AZTQ01000077.1 19052 18228 -2 - 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229923.peg.1577 CDS AZTQ01000077.1 19314 19126 -3 - 189 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein
fig|6666666.229923.peg.1578 CDS AZTQ01000077.1 20342 19314 -2 - 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229923.peg.1579 CDS AZTQ01000077.1 20525 21025 2 + 501 hypothetical protein - none -
fig|6666666.229923.peg.1580 CDS AZTQ01000077.1 23700 21130 -3 - 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229923.peg.1581 CDS AZTQ01000077.1 23863 24546 1 + 684 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229923.peg.1582 CDS AZTQ01000077.1 25735 24623 -1 - 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229923.peg.1583 CDS AZTQ01000077.1 26732 25920 -2 - 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229923.peg.1584 CDS AZTQ01000077.1 26836 27561 1 + 726 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.229923.peg.1585 CDS AZTQ01000077.1 27672 28256 3 + 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229923.peg.1586 CDS AZTQ01000077.1 28768 28607 -1 - 162 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.229923.peg.1587 CDS AZTQ01000077.1 29365 29228 -1 - 138 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.229923.peg.1588 CDS AZTQ01000077.1 29901 29347 -3 - 555 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.229923.peg.1589 CDS AZTQ01000077.1 30767 30174 -2 - 594 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.229923.peg.1590 CDS AZTQ01000077.1 31636 30764 -1 - 873 hypothetical protein - none -
fig|6666666.229923.peg.1591 CDS AZTQ01000077.1 31940 31740 -2 - 201 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis;
Histidine Biosynthesis
fig|6666666.229923.peg.1592 CDS AZTQ01000077.1 32168 31974 -2 - 195 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis;
Histidine Biosynthesis
fig|6666666.229923.peg.1593 CDS AZTQ01000077.1 32535 32302 -3 - 234 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis;
Histidine Biosynthesis
fig|6666666.229923.peg.1594 CDS AZTQ01000077.1 32809 32672 -1 - 138 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.229923.peg.1595 CDS AZTQ01000077.1 33272 32787 -2 - 486 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.229923.peg.1596 CDS AZTQ01000078.1 134 1288 2 + 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229923.peg.1597 CDS AZTQ01000078.1 1282 2316 1 + 1035 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229923.peg.1598 CDS AZTQ01000078.1 4077 2578 -3 - 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229923.peg.1599 CDS AZTQ01000078.1 5788 4355 -1 - 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229923.peg.1600 CDS AZTQ01000078.1 7187 5775 -2 - 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229923.peg.1601 CDS AZTQ01000078.1 8864 7362 -2 - 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229923.peg.1602 CDS AZTQ01000078.1 9754 8879 -1 - 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229923.peg.1603 CDS AZTQ01000078.1 10038 9751 -3 - 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229923.peg.1604 CDS AZTQ01000078.1 10980 10078 -3 - 903 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229923.peg.1605 CDS AZTQ01000079.1 234 106 -3 - 129 hypothetical protein - none -
fig|6666666.229923.peg.1606 CDS AZTQ01000079.1 314 1210 2 + 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229923.peg.1607 CDS AZTQ01000079.1 1599 3143 3 + 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229923.peg.1608 CDS AZTQ01000079.1 3423 3205 -3 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229923.peg.1609 CDS AZTQ01000079.1 3575 3441 -2 - 135 hypothetical protein - none -
fig|6666666.229923.peg.1610 CDS AZTQ01000079.1 3642 4946 3 + 1305 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229923.peg.1611 CDS AZTQ01000079.1 4958 5383 2 + 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229923.peg.1612 CDS AZTQ01000079.1 5518 6663 1 + 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229923.peg.1613 CDS AZTQ01000079.1 6656 6775 2 + 120 hypothetical protein - none -
fig|6666666.229923.peg.1614 CDS AZTQ01000079.1 7865 6753 -2 - 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229923.peg.1615 CDS AZTQ01000079.1 8038 10101 1 + 2064 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229923.peg.1616 CDS AZTQ01000079.1 10431 10237 -3 - 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229923.peg.1617 CDS AZTQ01000079.1 10772 10431 -2 - 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229923.peg.1618 CDS AZTQ01000079.1 12643 10784 -1 - 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229923.peg.1619 CDS AZTQ01000079.1 13185 12664 -3 - 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229923.peg.1620 CDS AZTQ01000079.1 13520 13197 -2 - 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229923.peg.1621 CDS AZTQ01000079.1 14046 13663 -3 - 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229923.peg.1622 CDS AZTQ01000079.1 15320 14106 -2 - 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229923.peg.1623 CDS AZTQ01000079.1 15848 15375 -2 - 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229923.peg.1624 CDS AZTQ01000079.1 16650 15910 -3 - 741 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Bacteria
fig|6666666.229923.peg.1625 CDS AZTQ01000079.1 16801 17601 1 + 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229923.peg.1626 CDS AZTQ01000079.1 19765 17654 -1 - 2112 unknown - none -
fig|6666666.229923.peg.1627 CDS AZTQ01000079.1 21189 20143 -3 - 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229923.peg.1628 CDS AZTQ01000079.1 23262 21205 -3 - 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229923.peg.1629 CDS AZTQ01000079.1 23996 23289 -2 - 708 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229923.peg.1630 CDS AZTQ01000079.1 25534 24494 -1 - 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229923.peg.1631 CDS AZTQ01000079.1 25840 26490 1 + 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229923.peg.1632 CDS AZTQ01000079.1 26500 27084 1 + 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229923.peg.1633 CDS AZTQ01000079.1 27085 28287 1 + 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229923.peg.1634 CDS AZTQ01000079.1 28334 29485 2 + 1152 Sugar efflux transporter SotB - none -
fig|6666666.229923.peg.1635 CDS AZTQ01000079.1 31096 29555 -1 - 1542 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229923.peg.1636 CDS AZTQ01000079.1 31381 32364 1 + 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229923.peg.1637 CDS AZTQ01000079.1 32387 32677 2 + 291 hypothetical protein - none -
fig|6666666.229923.peg.1638 CDS AZTQ01000079.1 34040 32742 -2 - 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229923.peg.1639 CDS AZTQ01000079.1 35093 34128 -2 - 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229923.peg.1640 CDS AZTQ01000079.1 36627 35107 -3 - 1521 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229923.peg.1641 CDS AZTQ01000079.1 36766 38241 1 + 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229923.peg.1642 CDS AZTQ01000079.1 38359 39006 1 + 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229923.peg.1643 CDS AZTQ01000079.1 39021 39719 3 + 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229923.peg.1644 CDS AZTQ01000079.1 40466 40077 -2 - 390 Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like - none -
fig|6666666.229923.peg.1645 CDS AZTQ01000079.1 41552 40995 -2 - 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-316407.3.peg.1371;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229923.peg.1646 CDS AZTQ01000079.1 41808 42998 3 + 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229923.peg.1647 CDS AZTQ01000079.1 43212 44264 3 + 1053 Outer membrane protein P2 precursor - none -
fig|6666666.229923.peg.1648 CDS AZTQ01000079.1 44410 44592 1 + 183 hypothetical protein - none -
fig|6666666.229923.peg.1649 CDS AZTQ01000079.1 44668 45015 1 + 348 Programmed cell death toxin ChpB - none -
fig|6666666.229923.peg.1650 CDS AZTQ01000079.1 45314 45090 -2 - 225 hypothetical protein - none -
fig|6666666.229923.peg.1651 CDS AZTQ01000079.1 45606 45373 -3 - 234 hypothetical protein - none -
fig|6666666.229923.peg.1652 CDS AZTQ01000079.1 46880 45753 -2 - 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229923.peg.1653 CDS AZTQ01000080.1 1327 65 -1 - 1263 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.229923.peg.1654 CDS AZTQ01000080.1 2007 1348 -3 - 660 putative membrane protein - none -
fig|6666666.229923.peg.1655 CDS AZTQ01000080.1 2203 2087 -1 - 117 hypothetical protein - none -
fig|6666666.229923.peg.1656 CDS AZTQ01000080.1 2218 3024 1 + 807 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229923.peg.1657 CDS AZTQ01000080.1 4488 3481 -3 - 1008 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229923.peg.1658 CDS AZTQ01000080.1 4645 6018 1 + 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229923.peg.1659 CDS AZTQ01000080.1 6210 6347 3 + 138 hypothetical protein - none -
fig|6666666.229923.peg.1660 CDS AZTQ01000080.1 6392 7510 2 + 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229923.peg.1661 CDS AZTQ01000080.1 7495 8280 1 + 786 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway - none -
fig|6666666.229923.peg.1662 CDS AZTQ01000080.1 8380 9399 1 + 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229923.peg.1663 CDS AZTQ01000080.1 9527 10339 2 + 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229923.peg.1664 CDS AZTQ01000080.1 10907 10416 -2 - 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229923.peg.1665 CDS AZTQ01000080.1 11862 10918 -3 - 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229923.peg.1666 CDS AZTQ01000080.1 11938 12615 1 + 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229923.peg.1667 CDS AZTQ01000080.1 12988 12725 -1 - 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229923.peg.1668 CDS AZTQ01000080.1 13269 14834 3 + 1566 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229923.peg.1669 CDS AZTQ01000080.1 14912 15838 2 + 927 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229923.peg.1670 CDS AZTQ01000080.1 15971 16219 2 + 249 FIG01055344: hypothetical protein - none -
fig|6666666.229923.peg.1671 CDS AZTQ01000080.1 16257 19079 3 + 2823 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229923.peg.1672 CDS AZTQ01000080.1 19276 19106 -1 - 171 hypothetical protein - none -
fig|6666666.229923.peg.1673 CDS AZTQ01000081.1 33 224 3 + 192 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229923.peg.1674 CDS AZTQ01000081.1 224 1168 2 + 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229923.peg.1675 CDS AZTQ01000081.1 1466 1606 2 + 141 hypothetical protein - none -
fig|6666666.229923.peg.1676 CDS AZTQ01000081.1 2918 1620 -2 - 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229923.peg.1677 CDS AZTQ01000081.1 3975 3082 -3 - 894 Tyrosine recombinase XerD - none -
fig|6666666.229923.peg.1678 CDS AZTQ01000081.1 5069 3972 -2 - 1098 Probable 3-phenylpropionic acid transporter - none -
fig|6666666.229923.peg.1679 CDS AZTQ01000081.1 5953 5138 -1 - 816 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229923.peg.1680 CDS AZTQ01000081.1 6016 6921 1 + 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229923.peg.1681 CDS AZTQ01000081.1 7387 7013 -1 - 375 opacity associated protein - none -
fig|6666666.229923.peg.1682 CDS AZTQ01000081.1 8771 7449 -2 - 1323 Cell envelope opacity-associated protein A - none -
fig|6666666.229923.peg.1683 CDS AZTQ01000081.1 9961 8942 -1 - 1020 Lysine 2,3-aminomutase (EC 5.4.3.2) - none -
fig|6666666.229923.peg.1684 CDS AZTQ01000081.1 10039 10560 1 + 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229923.peg.1685 CDS AZTQ01000082.1 1765 131 -1 - 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229923.peg.1686 CDS AZTQ01000082.1 1879 3294 1 + 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229923.peg.1687 CDS AZTQ01000083.1 2754 1006 -3 - 1749 hypothetical protein - none -
fig|6666666.229923.peg.1688 CDS AZTQ01000083.1 3722 2856 -2 - 867 MG(2+) CHELATASE FAMILY PROTEIN CBSS-203122.12.peg.188
fig|6666666.229923.peg.1689 CDS AZTQ01000083.1 4451 3837 -2 - 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229923.peg.1690 CDS AZTQ01000083.1 4586 5461 2 + 876 Membrane protein LAPB - none -
fig|6666666.229923.peg.1691 CDS AZTQ01000083.1 6033 5557 -3 - 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) RNA methylation
fig|6666666.229923.peg.1692 CDS AZTQ01000083.1 6649 6152 -1 - 498 Phospholipid-binding protein - none -
fig|6666666.229923.peg.1693 CDS AZTQ01000083.1 7585 6755 -1 - 831 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229923.peg.1694 CDS AZTQ01000083.1 8297 7620 -2 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229923.peg.1695 CDS AZTQ01000083.1 9324 8287 -3 - 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229923.peg.1696 CDS AZTQ01000083.1 9519 10076 3 + 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229923.peg.1697 CDS AZTQ01000084.1 91 222 1 + 132 Mobile element protein - none -
fig|6666666.229923.peg.1698 CDS AZTQ01000085.1 1452 223 -3 - 1230 Tyrosine-specific transport protein - none -
fig|6666666.229923.peg.1699 CDS AZTQ01000085.1 2262 1579 -3 - 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229923.peg.1700 CDS AZTQ01000085.1 3549 2278 -3 - 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229923.peg.1701 CDS AZTQ01000085.1 4112 3867 -2 - 246 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229923.peg.1702 CDS AZTQ01000085.1 4203 4316 3 + 114 hypothetical protein - none -
fig|6666666.229923.peg.1703 CDS AZTQ01000085.1 4428 4562 3 + 135 hypothetical protein - none -
fig|6666666.229923.peg.1704 CDS AZTQ01000085.1 4581 6044 3 + 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229923.peg.1705 CDS AZTQ01000085.1 6044 6556 2 + 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis
fig|6666666.229923.peg.1706 CDS AZTQ01000086.1 324 1772 3 + 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229923.peg.1707 CDS AZTQ01000086.1 1823 7594 2 + 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229923.peg.1708 CDS AZTQ01000087.1 1358 480 -2 - 879 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229923.peg.1709 CDS AZTQ01000087.1 2150 1359 -2 - 792 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229923.peg.1710 CDS AZTQ01000087.1 3376 2309 -1 - 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229923.peg.1711 CDS AZTQ01000088.1 1030 17 -1 - 1014 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229923.peg.1712 CDS AZTQ01000088.1 1029 1160 3 + 132 hypothetical protein - none -
fig|6666666.229923.peg.1713 CDS AZTQ01000088.1 1958 1149 -2 - 810 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229923.peg.1714 CDS AZTQ01000088.1 2908 2027 -1 - 882 Glycosyltransferase - none -
fig|6666666.229923.peg.1715 CDS AZTQ01000088.1 4101 2908 -3 - 1194 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229923.peg.1716 CDS AZTQ01000088.1 4886 4110 -2 - 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229923.peg.1717 CDS AZTQ01000088.1 5017 6540 1 + 1524 putative flippase - none -
fig|6666666.229923.peg.1718 CDS AZTQ01000088.1 6537 7493 3 + 957 Polysaccharide polymerization protein - none -
fig|6666666.229923.peg.1719 CDS AZTQ01000088.1 7602 7853 3 + 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229923.peg.1720 CDS AZTQ01000088.1 7850 8104 2 + 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229923.peg.1721 CDS AZTQ01000088.1 8117 8860 2 + 744 Probable transmembrane protein - none -
fig|6666666.229923.peg.1722 CDS AZTQ01000088.1 8833 8994 1 + 162 hypothetical protein - none -
fig|6666666.229923.peg.1723 CDS AZTQ01000088.1 9037 9864 1 + 828 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229923.peg.1724 CDS AZTQ01000088.1 12171 9997 -3 - 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229923.peg.1725 CDS AZTQ01000088.1 13694 12345 -2 - 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229923.peg.1726 CDS AZTQ01000088.1 13912 14430 1 + 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229923.peg.1727 CDS AZTQ01000088.1 14549 14427 -2 - 123 hypothetical protein - none -
fig|6666666.229923.peg.1728 CDS AZTQ01000088.1 15498 14500 -3 - 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229923.peg.1729 CDS AZTQ01000088.1 16371 15547 -3 - 825 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229923.peg.1730 CDS AZTQ01000088.1 16592 19702 2 + 3111 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229923.peg.1731 CDS AZTQ01000088.1 19704 20636 3 + 933 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229923.peg.1732 CDS AZTQ01000088.1 20629 21342 1 + 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229923.peg.1733 CDS AZTQ01000088.1 21670 21539 -1 - 132 hypothetical protein - none -
fig|6666666.229923.peg.1734 CDS AZTQ01000088.1 24250 21965 -1 - 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229923.peg.1735 CDS AZTQ01000088.1 24600 25145 3 + 546 Hydrogenase-4 component A - none -
fig|6666666.229923.peg.1736 CDS AZTQ01000088.1 25179 27200 3 + 2022 Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 Formate hydrogenase
fig|6666666.229923.peg.1737 CDS AZTQ01000088.1 27208 28173 1 + 966 Hydrogenase-4 component C - none -
fig|6666666.229923.peg.1738 CDS AZTQ01000088.1 28186 29631 1 + 1446 Hydrogenase-4 component D - none -
fig|6666666.229923.peg.1739 CDS AZTQ01000088.1 29642 30280 2 + 639 Hydrogenase-4 component E - none -
fig|6666666.229923.peg.1740 CDS AZTQ01000088.1 30285 31823 3 + 1539 Hydrogenase-4 component F - none -
fig|6666666.229923.peg.1741 CDS AZTQ01000088.1 31844 33574 2 + 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229923.peg.1742 CDS AZTQ01000088.1 33588 34235 3 + 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229923.peg.1743 CDS AZTQ01000088.1 34232 35008 2 + 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229923.peg.1744 CDS AZTQ01000088.1 35435 35842 2 + 408 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229923.peg.1745 CDS AZTQ01000088.1 35871 36293 3 + 423 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) Hydrogenases
fig|6666666.229923.peg.1746 CDS AZTQ01000088.1 36481 37614 1 + 1134 cell filamentation protein Fic-related protein - none -
fig|6666666.229923.peg.1747 CDS AZTQ01000088.1 37746 39968 3 + 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229923.peg.1750 CDS AZTQ01000088.1 41010 40138 -3 - 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) TCA Cycle
fig|6666666.229923.peg.1751 CDS AZTQ01000088.1 42190 41021 -1 - 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) TCA Cycle
fig|6666666.229923.peg.1752 CDS AZTQ01000088.1 43620 42397 -3 - 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229923.peg.1753 CDS AZTQ01000088.1 46555 43748 -1 - 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229923.peg.1754 CDS AZTQ01000088.1 46547 46741 2 + 195 hypothetical protein - none -
fig|6666666.229923.peg.1755 CDS AZTQ01000088.1 47413 46775 -1 - 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229923.peg.1756 CDS AZTQ01000088.1 48049 47489 -1 - 561 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229923.peg.1757 CDS AZTQ01000088.1 49626 48103 -3 - 1524 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229923.peg.1758 CDS AZTQ01000088.1 51762 49705 -3 - 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229923.peg.1759 CDS AZTQ01000088.1 52444 51836 -1 - 609 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229923.peg.1760 CDS AZTQ01000088.1 52669 53952 1 + 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229923.peg.1761 CDS AZTQ01000088.1 53915 56572 2 + 2658 Paraquat-inducible protein B Oxidative stress
fig|6666666.229923.peg.1762 CDS AZTQ01000088.1 57892 56648 -1 - 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229923.peg.1763 CDS AZTQ01000088.1 58156 59274 1 + 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229923.peg.1764 CDS AZTQ01000088.1 59258 60118 2 + 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229923.peg.1765 CDS AZTQ01000088.1 60118 60891 1 + 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229923.peg.1766 CDS AZTQ01000088.1 61022 62119 2 + 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229923.peg.1767 CDS AZTQ01000088.1 62243 63139 2 + 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229923.peg.1768 CDS AZTQ01000088.1 64534 63218 -1 - 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229923.peg.1769 CDS AZTQ01000088.1 64844 66511 2 + 1668 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229923.peg.1770 CDS AZTQ01000088.1 66726 66604 -3 - 123 hypothetical protein - none -
fig|6666666.229923.peg.1771 CDS AZTQ01000088.1 68233 66893 -1 - 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229923.peg.1772 CDS AZTQ01000088.1 68863 68246 -1 - 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229923.peg.1773 CDS AZTQ01000088.1 71709 68962 -3 - 2748 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229923.peg.1774 CDS AZTQ01000088.1 72192 71713 -3 - 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229923.peg.1775 CDS AZTQ01000088.1 74404 73031 -1 - 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229923.peg.1776 CDS AZTQ01000088.1 75562 74408 -1 - 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229923.peg.1777 CDS AZTQ01000088.1 75727 76407 1 + 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229923.peg.1778 CDS AZTQ01000088.1 76433 77698 2 + 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229923.peg.1779 CDS AZTQ01000088.1 77767 78378 1 + 612 SH3 domain protein - none -
fig|6666666.229923.peg.1780 CDS AZTQ01000088.1 78378 79655 3 + 1278 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229923.peg.1781 CDS AZTQ01000088.1 79716 80342 3 + 627 Outer membrane lipoprotein LolB precursor - none -
fig|6666666.229923.peg.1782 CDS AZTQ01000088.1 80339 81250 2 + 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229923.peg.1783 CDS AZTQ01000088.1 81291 82241 3 + 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229923.peg.1784 CDS AZTQ01000089.1 28 174 1 + 147 hypothetical protein - none -
fig|6666666.229923.peg.1785 CDS AZTQ01000089.1 473 1618 2 + 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229923.peg.1786 CDS AZTQ01000089.1 1857 3446 3 + 1590 L-lactate permease Lactate utilization
fig|6666666.229923.peg.1787 CDS AZTQ01000089.1 3933 3601 -3 - 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229923.peg.1788 CDS AZTQ01000090.1 389 126 -2 - 264 LSU ribosomal protein L20p Ribosome LSU bacterial
fig|6666666.229923.peg.1789 CDS AZTQ01000090.1 811 954 1 + 144 hypothetical protein - none -
fig|6666666.229923.peg.1790 CDS AZTQ01000090.1 1434 955 -3 - 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229923.peg.1791 CDS AZTQ01000090.1 1810 2589 1 + 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229923.peg.1792 CDS AZTQ01000090.1 4660 2729 -1 - 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229923.peg.1793 CDS AZTQ01000090.1 4900 5775 1 + 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229923.peg.1794 CDS AZTQ01000090.1 6665 5841 -2 - 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229923.peg.1795 CDS AZTQ01000090.1 7824 6856 -3 - 969 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229923.peg.1796 CDS AZTQ01000091.1 1572 790 -3 - 783 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229923.peg.1797 CDS AZTQ01000091.1 1681 1995 1 + 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229923.peg.1798 CDS AZTQ01000091.1 1992 2705 3 + 714 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229923.peg.1799 CDS AZTQ01000091.1 2758 2922 1 + 165 hypothetical protein - none -
fig|6666666.229923.peg.1800 CDS AZTQ01000091.1 3112 3321 1 + 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229923.peg.1801 CDS AZTQ01000091.1 3834 3388 -3 - 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229923.peg.1802 CDS AZTQ01000091.1 3981 5765 3 + 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229923.peg.1803 CDS AZTQ01000091.1 5908 6438 1 + 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229923.peg.1804 CDS AZTQ01000092.1 92 598 2 + 507 putative exported protein - none -
fig|6666666.229923.peg.1805 CDS AZTQ01000092.1 614 1648 2 + 1035 putative membrane protein - none -
fig|6666666.229923.peg.1806 CDS AZTQ01000092.1 2259 4301 3 + 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229923.peg.1807 CDS AZTQ01000092.1 4528 5598 1 + 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229923.peg.1808 CDS AZTQ01000092.1 7181 5799 -2 - 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229923.peg.1809 CDS AZTQ01000092.1 7789 7379 -1 - 411 probable membrane protein YPO3565 - none -
fig|6666666.229923.peg.1810 CDS AZTQ01000092.1 9724 7961 -1 - 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229923.peg.1811 CDS AZTQ01000092.1 11020 9815 -1 - 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229923.peg.1812 CDS AZTQ01000092.1 11196 11534 3 + 339 FIG00904093: hypothetical protein - none -
fig|6666666.229923.peg.1813 CDS AZTQ01000092.1 11726 13219 2 + 1494 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229923.peg.1814 CDS AZTQ01000092.1 13978 13280 -1 - 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229923.peg.1815 CDS AZTQ01000092.1 13999 14700 1 + 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229923.peg.1816 CDS AZTQ01000092.1 14891 16195 2 + 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229923.peg.1817 CDS AZTQ01000092.1 16257 17480 3 + 1224 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229923.peg.1818 CDS AZTQ01000092.1 18747 18103 -3 - 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229923.peg.1819 CDS AZTQ01000092.1 18883 18758 -1 - 126 hypothetical protein - none -
fig|6666666.229923.peg.1820 CDS AZTQ01000092.1 20175 18880 -3 - 1296 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229923.peg.1821 CDS AZTQ01000092.1 20523 20182 -3 - 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229923.peg.1822 CDS AZTQ01000092.1 21545 20529 -2 - 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229923.peg.1823 CDS AZTQ01000092.1 21740 22126 2 + 387 Integral membrane protein - none -
fig|6666666.229923.peg.1824 CDS AZTQ01000092.1 22362 22240 -3 - 123 hypothetical protein - none -
fig|6666666.229923.peg.1825 CDS AZTQ01000093.1 28 804 1 + 777 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229923.peg.1826 CDS AZTQ01000093.1 2257 911 -1 - 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229923.peg.1827 CDS AZTQ01000093.1 3146 2289 -2 - 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229923.peg.1828 CDS AZTQ01000093.1 4162 3209 -1 - 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229923.peg.1829 CDS AZTQ01000093.1 5944 6894 1 + 951 hypothetical protein - none -
fig|6666666.229923.peg.1830 CDS AZTQ01000093.1 8846 7287 -2 - 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229923.peg.1831 CDS AZTQ01000093.1 9144 8878 -3 - 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229923.peg.1832 CDS AZTQ01000093.1 9428 9156 -2 - 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229923.peg.1833 CDS AZTQ01000093.1 9653 9468 -2 - 186 hypothetical protein - none -
fig|6666666.229923.peg.1834 CDS AZTQ01000093.1 11035 9683 -1 - 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229923.peg.1835 CDS AZTQ01000093.1 11461 11916 1 + 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229923.peg.1836 CDS AZTQ01000093.1 11940 13436 3 + 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229923.peg.1837 CDS AZTQ01000093.1 13452 15944 3 + 2493 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229923.peg.1838 CDS AZTQ01000093.1 16477 16863 1 + 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229923.peg.1839 CDS AZTQ01000093.1 16863 17780 3 + 918 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229923.peg.1840 CDS AZTQ01000093.1 18089 17871 -2 - 219 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.229923.peg.1841 CDS AZTQ01000093.1 18294 18079 -3 - 216 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.229923.peg.1842 CDS AZTQ01000093.1 18470 18336 -2 - 135 hypothetical protein - none -
fig|6666666.229923.peg.1843 CDS AZTQ01000093.1 18688 18467 -1 - 222 Fructokinase (EC 2.7.1.4) Fructose utilization;
Mannitol Utilization
fig|6666666.229923.peg.1844 CDS AZTQ01000093.1 20192 19440 -2 - 753 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229923.peg.1845 CDS AZTQ01000094.1 1294 569 -1 - 726 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229923.peg.1846 CDS AZTQ01000094.1 1597 3132 1 + 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229923.peg.1847 CDS AZTQ01000094.1 3143 4567 2 + 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229923.peg.1848 CDS AZTQ01000094.1 4830 4991 3 + 162 hypothetical protein - none -
fig|6666666.229923.peg.1849 CDS AZTQ01000094.1 5123 4962 -2 - 162 hypothetical protein - none -
fig|6666666.229923.peg.1850 CDS AZTQ01000094.1 5591 6445 2 + 855 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229923.peg.1851 CDS AZTQ01000094.1 6979 8058 1 + 1080 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229923.peg.1852 CDS AZTQ01000094.1 8194 8069 -1 - 126 hypothetical protein - none -
fig|6666666.229923.peg.1853 CDS AZTQ01000094.1 8293 9363 1 + 1071 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229923.peg.1854 CDS AZTQ01000094.1 9360 10229 3 + 870 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229923.peg.1855 CDS AZTQ01000094.1 10226 11077 2 + 852 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229923.peg.1856 CDS AZTQ01000094.1 11097 12188 3 + 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229923.peg.1857 CDS AZTQ01000094.1 12399 12238 -3 - 162 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229923.peg.1858 CDS AZTQ01000094.1 14230 12401 -1 - 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229923.peg.1859 CDS AZTQ01000094.1 15525 14752 -3 - 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis
fig|6666666.229923.peg.1860 CDS AZTQ01000094.1 15706 15527 -1 - 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.229923.peg.1861 CDS AZTQ01000094.1 16702 15728 -1 - 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis
fig|6666666.229923.peg.1862 CDS AZTQ01000094.1 18476 16728 -2 - 1749 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229923.peg.1863 CDS AZTQ01000094.1 20952 18523 -3 - 2430 DNA internalization-related competence protein ComEC/Rec2 KDO2-Lipid A biosynthesis
fig|6666666.229923.peg.1864 CDS AZTQ01000094.1 21250 21687 1 + 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229923.peg.1865 CDS AZTQ01000094.1 21804 23270 3 + 1467 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229923.peg.1866 CDS AZTQ01000094.1 23263 23763 1 + 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229923.peg.1867 CDS AZTQ01000094.1 24187 23825 -1 - 363 hypothetical protein - none -
fig|6666666.229923.peg.1868 CDS AZTQ01000094.1 24402 24283 -3 - 120 hypothetical protein - none -
fig|6666666.229923.peg.1869 CDS AZTQ01000094.1 26668 24533 -1 - 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229923.peg.1870 CDS AZTQ01000094.1 27938 26736 -2 - 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229923.peg.1871 CDS AZTQ01000094.1 28205 28648 2 + 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229923.peg.1872 CDS AZTQ01000094.1 28828 29370 1 + 543 Colicin V production protein - none -
fig|6666666.229923.peg.1873 CDS AZTQ01000094.1 29443 29562 1 + 120 hypothetical protein - none -
fig|6666666.229923.peg.1874 CDS AZTQ01000094.1 31595 29520 -2 - 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229923.peg.1875 CDS AZTQ01000094.1 34131 31741 -3 - 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229923.peg.1876 CDS AZTQ01000094.1 34304 37018 2 + 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229923.peg.1877 CDS AZTQ01000094.1 38038 37178 -1 - 861 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229923.peg.1878 CDS AZTQ01000094.1 38432 41089 2 + 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229923.peg.1879 CDS AZTQ01000094.1 41178 42767 3 + 1590 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229923.peg.1880 CDS AZTQ01000094.1 42861 44285 3 + 1425 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229923.peg.1881 CDS AZTQ01000094.1 45191 44637 -2 - 555 FIG002003: Protein YdjA - none -
fig|6666666.229923.peg.1882 CDS AZTQ01000094.1 45315 47198 3 + 1884 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229923.peg.1883 CDS AZTQ01000094.1 47241 48365 3 + 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229923.peg.1884 CDS AZTQ01000094.1 48442 49065 1 + 624 Hypothetical YciO protein, TsaC/YrdC paralog YrdC-YciO-Sua5 protein family
fig|6666666.229923.peg.1885 CDS AZTQ01000094.1 49120 50088 1 + 969 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229923.peg.1886 CDS AZTQ01000094.1 50119 51090 1 + 972 Cys regulon transcriptional activator CysB LysR-family proteins in Escherichia coli
fig|6666666.229923.peg.1887 CDS AZTQ01000094.1 51174 52001 3 + 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229923.peg.1888 CDS AZTQ01000094.1 52435 52115 -1 - 321 putative cytoplasmic protein - none -
fig|6666666.229923.peg.1889 CDS AZTQ01000094.1 52619 52437 -2 - 183 hypothetical protein - none -
fig|6666666.229923.peg.1890 CDS AZTQ01000094.1 53727 52729 -3 - 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229923.peg.1891 CDS AZTQ01000094.1 55146 54031 -3 - 1116 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229923.peg.1892 CDS AZTQ01000094.1 55327 56040 1 + 714 SanA protein - none -
fig|6666666.229923.peg.1893 CDS AZTQ01000094.1 57010 56024 -1 - 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229923.peg.1894 CDS AZTQ01000094.1 57837 57685 -3 - 153 hypothetical protein - none -
fig|6666666.229923.peg.1895 CDS AZTQ01000094.1 58204 58455 1 + 252 FIG00699498: hypothetical protein - none -
fig|6666666.229923.peg.1896 CDS AZTQ01000094.1 58624 58505 -1 - 120 hypothetical protein - none -
fig|6666666.229923.peg.1897 CDS AZTQ01000094.1 60335 59853 -2 - 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229923.peg.1898 CDS AZTQ01000094.1 60992 60351 -2 - 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229923.peg.1899 CDS AZTQ01000094.1 62066 60996 -2 - 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229923.peg.1900 CDS AZTQ01000094.1 62283 62975 3 + 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229923.peg.1901 CDS AZTQ01000094.1 63697 63110 -1 - 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229923.peg.1902 CDS AZTQ01000094.1 64346 63762 -2 - 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229923.peg.1903 CDS AZTQ01000094.1 64717 64358 -1 - 360 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229923.peg.1904 CDS AZTQ01000094.1 66445 64727 -1 - 1719 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229923.peg.1905 CDS AZTQ01000094.1 66522 67370 3 + 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229923.peg.1906 CDS AZTQ01000094.1 67640 69229 2 + 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229923.peg.1907 CDS AZTQ01000094.1 69415 70752 1 + 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229923.peg.1908 CDS AZTQ01000094.1 71434 70844 -1 - 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229923.peg.1909 CDS AZTQ01000096.1 777 1460 3 + 684 hypothetical protein - none -
fig|6666666.229923.peg.1910 CDS AZTQ01000096.1 4150 3761 -1 - 390 COG2363 - none -
fig|6666666.229923.peg.1911 CDS AZTQ01000096.1 4603 4151 -1 - 453 putative membrane protein - none -
fig|6666666.229923.peg.1912 CDS AZTQ01000096.1 5057 4728 -2 - 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229923.peg.1913 CDS AZTQ01000096.1 5631 5434 -3 - 198 LemA family protein - none -
fig|6666666.229923.peg.1914 CDS AZTQ01000096.1 5743 5603 -1 - 141 hypothetical protein - none -
fig|6666666.229923.peg.1915 CDS AZTQ01000097.1 2094 745 -3 - 1350 Sodium-dependent transporter - none -
fig|6666666.229923.peg.1916 CDS AZTQ01000098.1 961 44 -1 - 918 Permeases of the major facilitator superfamily - none -
fig|6666666.229923.peg.1917 CDS AZTQ01000098.1 1266 2264 3 + 999 PTS system, mannose-specific IIA component / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229923.peg.1918 CDS AZTQ01000098.1 2276 3079 2 + 804 PTS system, mannose-specific IIC component - none -
fig|6666666.229923.peg.1919 CDS AZTQ01000098.1 3094 3930 1 + 837 PTS system, mannose-specific IID component - none -
fig|6666666.229923.peg.1920 CDS AZTQ01000098.1 4329 4111 -3 - 219 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.1921 CDS AZTQ01000098.1 5065 4310 -1 - 756 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.1922 CDS AZTQ01000098.1 5711 5073 -2 - 639 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229923.peg.1923 CDS AZTQ01000099.1 2991 1720 -3 - 1272 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229923.peg.1924 CDS AZTQ01000099.1 3265 3008 -1 - 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229923.peg.1925 CDS AZTQ01000099.1 3534 3265 -3 - 270 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229923.peg.1926 CDS AZTQ01000099.1 4269 3628 -3 - 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229923.peg.1927 CDS AZTQ01000099.1 4807 4298 -1 - 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229923.peg.1928 CDS AZTQ01000099.1 5615 4830 -2 - 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229923.peg.1929 CDS AZTQ01000099.1 6406 5609 -1 - 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229923.peg.1930 CDS AZTQ01000100.1 477 193 -3 - 285 hypothetical protein - none -
fig|6666666.229923.peg.1931 CDS AZTQ01000100.1 641 474 -2 - 168 hypothetical protein - none -
fig|6666666.229923.peg.1932 CDS AZTQ01000100.1 902 1033 2 + 132 hypothetical protein - none -
fig|6666666.229923.peg.1933 CDS AZTQ01000100.1 1056 1337 3 + 282 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229923.peg.1934 CDS AZTQ01000100.1 2191 3087 1 + 897 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.229923.peg.1935 CDS AZTQ01000100.1 3334 3173 -1 - 162 hypothetical protein - none -
fig|6666666.229923.peg.1936 CDS AZTQ01000100.1 5296 4139 -1 - 1158 IncQ plasmid conjugative transfer DNA nicking endonuclease TraR (pTi VirD2 homolog) - none -
fig|6666666.229923.peg.1937 CDS AZTQ01000101.1 1280 135 -2 - 1146 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229923.peg.1938 CDS AZTQ01000101.1 1569 1688 3 + 120 hypothetical protein - none -
fig|6666666.229923.peg.1939 CDS AZTQ01000101.1 1758 2894 3 + 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229923.peg.1940 CDS AZTQ01000101.1 4030 2939 -1 - 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229923.peg.1941 CDS AZTQ01000101.1 4659 4204 -3 - 456 hypothetical protein - none -
fig|6666666.229923.peg.1942 CDS AZTQ01000101.1 5416 4775 -1 - 642 ABC-type Fe3+-hydroxamate transport system, periplasmic component - none -
fig|6666666.229923.peg.1943 CDS AZTQ01000101.1 6282 5428 -3 - 855 NgrB - none -
fig|6666666.229923.peg.1944 CDS AZTQ01000101.1 7272 6292 -3 - 981 NgrB - none -
fig|6666666.229923.peg.1945 CDS AZTQ01000101.1 7533 7282 -3 - 252 hypothetical protein - none -
fig|6666666.229923.peg.1946 CDS AZTQ01000101.1 7665 7546 -3 - 120 hypothetical protein - none -
fig|6666666.229923.peg.1947 CDS AZTQ01000101.1 8439 7666 -3 - 774 transcriptional regulator, putative - none -
fig|6666666.229923.peg.1948 CDS AZTQ01000101.1 8845 8726 -1 - 120 hypothetical protein - none -
fig|6666666.229923.peg.1949 CDS AZTQ01000101.1 10349 8961 -2 - 1389 Putative protease - none -
fig|6666666.229923.peg.1950 CDS AZTQ01000101.1 10422 10550 3 + 129 hypothetical protein - none -
fig|6666666.229923.peg.1951 CDS AZTQ01000101.1 11080 10517 -1 - 564 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229923.peg.1952 CDS AZTQ01000101.1 11561 11058 -2 - 504 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229923.peg.1953 CDS AZTQ01000101.1 11739 11605 -3 - 135 hypothetical protein - none -
fig|6666666.229923.peg.1954 CDS AZTQ01000102.1 33 191 3 + 159 conserved hypothetical protein - none -
fig|6666666.229923.peg.1955 CDS AZTQ01000102.1 542 252 -2 - 291 StbE replicon stabilization toxin - none -
fig|6666666.229923.peg.1956 CDS AZTQ01000102.1 789 532 -3 - 258 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229923.peg.1957 CDS AZTQ01000102.1 1995 1234 -3 - 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229923.peg.1958 CDS AZTQ01000102.1 2063 2530 2 + 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229923.peg.1959 CDS AZTQ01000102.1 2652 2512 -3 - 141 hypothetical protein - none -
fig|6666666.229923.peg.1960 CDS AZTQ01000102.1 2794 3093 1 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229923.peg.1961 CDS AZTQ01000102.1 3124 4974 1 + 1851 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229923.peg.1962 CDS AZTQ01000102.1 4955 5956 2 + 1002 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229923.peg.1963 CDS AZTQ01000103.1 134 2566 2 + 2433 Iron siderophore receptor protein - none -
fig|6666666.229923.peg.1964 CDS AZTQ01000103.1 2833 5454 1 + 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229923.peg.1965 CDS AZTQ01000103.1 6489 5536 -3 - 954 Inositol transport system permease protein Inositol catabolism
fig|6666666.229923.peg.1966 CDS AZTQ01000103.1 8045 6540 -2 - 1506 Inositol transport system ATP-binding protein Inositol catabolism
fig|6666666.229923.peg.1967 CDS AZTQ01000103.1 9046 8114 -1 - 933 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229923.peg.1968 CDS AZTQ01000103.1 9976 9128 -1 - 849 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229923.peg.1969 CDS AZTQ01000104.1 280 420 1 + 141 hypothetical protein - none -
fig|6666666.229923.peg.1970 CDS AZTQ01000104.1 1114 470 -1 - 645 Coupling protein VirD4, ATPase required for T-DNA transfer - none -
fig|6666666.229923.peg.1971 CDS AZTQ01000104.1 1263 2930 3 + 1668 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229923.peg.1972 CDS AZTQ01000104.1 2941 3672 1 + 732 Minor pilin of type IV secretion complex, VirB5 - none -
fig|6666666.229923.peg.1973 CDS AZTQ01000104.1 3923 4924 2 + 1002 Inner membrane protein of type IV secretion of T-DNA complex, VirB6 - none -
fig|6666666.229923.peg.1974 CDS AZTQ01000104.1 4992 5135 3 + 144 hypothetical protein - none -
fig|6666666.229923.peg.1975 CDS AZTQ01000104.1 5132 5818 2 + 687 Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB8 - none -
fig|6666666.229923.peg.1976 CDS AZTQ01000104.1 5820 6182 3 + 363 Outer membrane and periplasm component of type IV secretion of T-DNA complex, has secretin-like domain, VirB9 - none -
fig|6666666.229923.peg.1977 CDS AZTQ01000104.1 6185 7921 2 + 1737 Type IV secretion system protein VirD4 - none -
fig|6666666.229923.peg.1978 CDS AZTQ01000104.1 7955 8392 2 + 438 hypothetical protein - none -
fig|6666666.229923.peg.1979 CDS AZTQ01000104.1 9075 9206 3 + 132 hypothetical protein - none -
fig|6666666.229923.peg.1980 CDS AZTQ01000104.1 9229 9870 1 + 642 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229923.peg.1981 CDS AZTQ01000104.1 9863 10102 2 + 240 hypothetical protein - none -
fig|6666666.229923.peg.1982 CDS AZTQ01000104.1 10155 10997 3 + 843 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229923.peg.1983 CDS AZTQ01000104.1 11712 11867 3 + 156 hypothetical protein - none -
fig|6666666.229923.peg.1984 CDS AZTQ01000105.1 1604 168 -2 - 1437 GTP-binding protein - none -
fig|6666666.229923.peg.1985 CDS AZTQ01000105.1 1882 3786 1 + 1905 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229923.peg.1986 CDS AZTQ01000106.1 1517 651 -2 - 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229923.peg.1987 CDS AZTQ01000106.1 2401 1514 -1 - 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229923.peg.1988 CDS AZTQ01000106.1 3681 2401 -3 - 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229923.peg.1989 CDS AZTQ01000106.1 4819 3695 -1 - 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229923.peg.1990 CDS AZTQ01000106.1 5338 4835 -1 - 504 Flp pilus assembly protein RcpB Widespread colonization island
fig|6666666.229923.peg.1991 CDS AZTQ01000106.1 6717 5335 -3 - 1383 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229923.peg.1992 CDS AZTQ01000106.1 7543 6719 -1 - 825 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229923.peg.1993 CDS AZTQ01000106.1 7775 7599 -2 - 177 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229923.peg.1994 CDS AZTQ01000106.1 8592 8365 -3 - 228 Flp pilus assembly protein, pilin Flp Widespread colonization island
fig|6666666.229923.peg.1995 CDS AZTQ01000106.1 9159 9623 3 + 465 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229923.peg.1996 CDS AZTQ01000107.1 37 837 1 + 801 Cell filamentation protein fic - none -
fig|6666666.229923.peg.1997 CDS AZTQ01000107.1 1012 827 -1 - 186 hypothetical protein - none -
fig|6666666.229923.peg.1998 CDS AZTQ01000107.1 1069 2043 1 + 975 Mobile element protein - none -
fig|6666666.229923.peg.1999 CDS AZTQ01000107.1 3014 2283 -2 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229923.peg.2000 CDS AZTQ01000107.1 3521 3030 -2 - 492 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229923.peg.2001 CDS AZTQ01000108.1 575 1231 2 + 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229923.peg.2002 CDS AZTQ01000108.1 2784 1342 -3 - 1443 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229923.peg.2003 CDS AZTQ01000108.1 2945 3421 2 + 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229923.peg.2004 CDS AZTQ01000108.1 3798 3496 -3 - 303 FIG004454: RNA binding protein - none -
fig|6666666.229923.peg.2005 CDS AZTQ01000108.1 4008 4265 3 + 258 Phage-related protein - none -
fig|6666666.229923.peg.2006 CDS AZTQ01000108.1 4262 4555 2 + 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229923.peg.2007 CDS AZTQ01000108.1 5202 4588 -3 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229923.peg.2008 CDS AZTQ01000108.1 5229 6626 3 + 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229923.peg.2009 CDS AZTQ01000108.1 6896 9034 2 + 2139 Ferrichrome-iron receptor - none -
fig|6666666.229923.peg.2010 CDS AZTQ01000108.1 9088 10833 1 + 1746 Ferrichrome-iron receptor - none -
fig|6666666.229923.peg.2011 CDS AZTQ01000108.1 11426 10947 -2 - 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229923.peg.2012 CDS AZTQ01000108.1 11487 12458 3 + 972 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229923.peg.2013 CDS AZTQ01000108.1 12512 13141 2 + 630 Exopolysaccharide biosynthesis protein - none -
fig|6666666.229923.peg.2014 CDS AZTQ01000108.1 14156 14458 2 + 303 Major pilus subunit of type IV secretion complex, VirB2 - none -
fig|6666666.229923.peg.2015 CDS AZTQ01000108.1 14637 17297 3 + 2661 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229923.peg.2016 CDS AZTQ01000108.1 17477 18103 2 + 627 Minor pilin of type IV secretion complex, VirB5 - none -
fig|6666666.229923.peg.2017 CDS AZTQ01000108.1 18515 19324 2 + 810 hypothetical protein - none -
fig|6666666.229923.peg.2018 CDS AZTQ01000108.1 19359 20069 3 + 711 Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB8 - none -
fig|6666666.229923.peg.2019 CDS AZTQ01000108.1 20066 20956 2 + 891 Forms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9) - none -
fig|6666666.229923.peg.2020 CDS AZTQ01000108.1 20967 21458 3 + 492 hypothetical protein - none -
fig|6666666.229923.peg.2021 CDS AZTQ01000108.1 21469 21810 1 + 342 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229923.peg.2022 CDS AZTQ01000108.1 21779 22582 2 + 804 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229923.peg.2023 CDS AZTQ01000108.1 22582 22884 1 + 303 ABC transporter ATP-binding protein - none -
fig|6666666.229923.peg.2024 CDS AZTQ01000108.1 22885 23199 1 + 315 ABC transporter ATP-binding protein - none -
fig|6666666.229923.peg.2025 CDS AZTQ01000109.1 72 647 3 + 576 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229923.peg.2026 CDS AZTQ01000109.1 660 1445 3 + 786 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229923.peg.2027 CDS AZTQ01000109.1 3200 1827 -2 - 1374 sodium-dependent transporter - none -
fig|6666666.229923.peg.2028 CDS AZTQ01000109.1 3860 3225 -2 - 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229923.peg.2029 CDS AZTQ01000109.1 4795 4007 -1 - 789 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.2030 CDS AZTQ01000109.1 5403 4792 -3 - 612 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.2031 CDS AZTQ01000109.1 6492 5413 -3 - 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.2032 CDS AZTQ01000109.1 6847 6503 -1 - 345 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.2033 CDS AZTQ01000110.1 2307 1717 -3 - 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.2034 CDS AZTQ01000110.1 2888 2307 -2 - 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229923.peg.2035 CDS AZTQ01000110.1 3965 3078 -2 - 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229923.peg.2036 CDS AZTQ01000110.1 4456 3989 -1 - 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229923.peg.2037 CDS AZTQ01000111.1 1127 750 -2 - 378 hypothetical protein - none -
fig|6666666.229923.peg.2038 CDS AZTQ01000111.1 1701 1255 -3 - 447 hypothetical protein - none -
fig|6666666.229923.peg.2039 CDS AZTQ01000111.1 2135 1707 -2 - 429 hypothetical protein - none -
fig|6666666.229923.peg.2040 CDS AZTQ01000112.1 360 1 -3 - 360 Mobile element protein - none -
fig|6666666.229923.peg.2041 CDS AZTQ01000113.1 1451 372 -2 - 1080 DNA-cytosine methyltransferase (EC 2.1.1.37) DNA repair, bacterial
fig|6666666.229923.peg.2042 CDS AZTQ01000113.1 4755 1909 -3 - 2847 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229923.peg.2043 CDS AZTQ01000115.1 1659 160 -3 - 1500 ATPase component BioM of energizing module of biotin ECF transporter ECF class transporters
fig|6666666.229923.peg.2044 CDS AZTQ01000115.1 1791 2453 3 + 663 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229923.peg.2045 CDS AZTQ01000115.1 2456 2932 2 + 477 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229923.peg.2046 CDS AZTQ01000115.1 2929 3759 1 + 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229923.peg.2047 CDS AZTQ01000116.1 225 1433 3 + 1209 Sodium/glutamate symport protein - none -
fig|6666666.229923.peg.2048 CDS AZTQ01000116.1 2341 1490 -1 - 852 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229923.peg.2049 CDS AZTQ01000119.1 157 693 1 + 537 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229923.peg.2050 CDS AZTQ01000119.1 828 1457 3 + 630 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) RNA methylation
fig|6666666.229923.peg.2051 CDS AZTQ01000120.1 23 1405 2 + 1383 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229923.peg.2052 CDS AZTQ01000120.1 1505 2041 2 + 537 Putative transporting ATPase - none -
fig|6666666.229923.peg.2053 CDS AZTQ01000120.1 3227 2169 -2 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229923.peg.2054 CDS AZTQ01000120.1 4943 3249 -2 - 1695 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229923.peg.2055 CDS AZTQ01000120.1 6025 4946 -1 - 1080 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229923.peg.2056 CDS AZTQ01000120.1 7042 6047 -1 - 996 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229923.peg.2057 CDS AZTQ01000120.1 7416 8402 3 + 987 Phosphoglycerate transport regulatory protein PgtC - none -
fig|6666666.229923.peg.2058 CDS AZTQ01000120.1 8402 8656 2 + 255 Phosphoglycerate transport regulatory protein PgtC - none -
fig|6666666.229923.peg.2059 CDS AZTQ01000120.1 8653 10635 1 + 1983 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) - none -
fig|6666666.229923.peg.2060 CDS AZTQ01000121.1 301 906 1 + 606 Mobile element protein - none -
fig|6666666.229923.peg.2061 CDS AZTQ01000122.1 288 13 -3 - 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229923.peg.2062 CDS AZTQ01000122.1 731 318 -2 - 414 Hydrogenase-2 operon protein hybE - none -
fig|6666666.229923.peg.2063 CDS AZTQ01000124.1 29 1543 2 + 1515 Dca - none -
fig|6666666.229923.peg.2064 CDS AZTQ01000125.1 1143 2426 3 + 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229923.peg.2065 CDS AZTQ01000125.1 5091 2500 -3 - 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229923.peg.2066 CDS AZTQ01000125.1 5957 5157 -2 - 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229923.peg.2067 CDS AZTQ01000125.1 6091 6432 1 + 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229923.peg.2068 CDS AZTQ01000125.1 6434 6706 2 + 273 putative cytoplasmic protein - none -
fig|6666666.229923.peg.2069 CDS AZTQ01000126.1 36 173 3 + 138 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229923.peg.2070 CDS AZTQ01000126.1 480 2387 3 + 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229923.peg.2071 CDS AZTQ01000126.1 2430 2951 3 + 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229923.peg.2072 CDS AZTQ01000126.1 3090 4520 3 + 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229923.peg.2073 CDS AZTQ01000126.1 4523 5848 2 + 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229923.peg.2074 CDS AZTQ01000126.1 5835 6974 3 + 1140 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229923.peg.2075 CDS AZTQ01000126.1 6976 7647 1 + 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229923.peg.2076 CDS AZTQ01000126.1 7637 8128 2 + 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229923.peg.2077 CDS AZTQ01000126.1 8407 8105 -1 - 303 hypothetical protein - none -
fig|6666666.229923.peg.2078 CDS AZTQ01000127.1 67 180 1 + 114 hypothetical protein - none -
fig|6666666.229923.rna.1 RNA AZTQ01000001.1 36584 36514 -2 - 71 tRNA-Pseudo-AAC - none -
fig|6666666.229923.rna.2 RNA AZTQ01000003.1 125 198 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.229923.rna.3 RNA AZTQ01000003.1 251 323 2 + 73 tRNA-Ala-TGC - none -
fig|6666666.229923.rna.4 RNA AZTQ01000004.1 258 186 -3 - 73 tRNA-Thr-GGT - none -
fig|6666666.229923.rna.5 RNA AZTQ01000004.1 336 265 -3 - 72 tRNA-Gly-TCC - none -
fig|6666666.229923.rna.6 RNA AZTQ01000004.1 461 380 -2 - 82 tRNA-Tyr-GTA - none -
fig|6666666.229923.rna.7 RNA AZTQ01000004.1 567 495 -3 - 73 tRNA-Thr-TGT - none -
fig|6666666.229923.rna.8 RNA AZTQ01000010.1 55813 55740 -1 - 74 tRNA-Arg-ACG - none -
fig|6666666.229923.rna.9 RNA AZTQ01000010.1 55944 55871 -3 - 74 tRNA-Arg-ACG - none -
fig|6666666.229923.rna.10 RNA AZTQ01000010.1 56055 55965 -3 - 91 tRNA-Ser-GCT - none -
fig|6666666.229923.rna.11 RNA AZTQ01000016.1 5441 5523 2 + 83 tRNA-Leu-CAA - none -
fig|6666666.229923.rna.12 RNA AZTQ01000017.1 114 1 -3 - 114 5S RNA - none -
fig|6666666.229923.rna.13 RNA AZTQ01000017.1 3413 371 -2 - 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229923.rna.14 RNA AZTQ01000025.1 8375 8305 -2 - 71 tRNA-Cys-GCA - none -
fig|6666666.229923.rna.15 RNA AZTQ01000025.1 8459 8387 -2 - 73 tRNA-Gly-GCC - none -
fig|6666666.229923.rna.16 RNA AZTQ01000025.1 15843 15929 3 + 87 tRNA-Ser-TGA - none -
fig|6666666.229923.rna.17 RNA AZTQ01000026.1 1691 1605 -2 - 87 tRNA-Ser-GGA - none -
fig|6666666.229923.rna.18 RNA AZTQ01000044.1 280 1836 1 + 1557 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229923.rna.19 RNA AZTQ01000046.1 8390 8480 2 + 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229923.rna.20 RNA AZTQ01000046.1 10674 10601 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229923.rna.21 RNA AZTQ01000049.1 19641 19569 -3 - 73 tRNA-Ala-GGC - none -
fig|6666666.229923.rna.22 RNA AZTQ01000049.1 21451 21523 1 + 73 tRNA-Val-TAC - none -
fig|6666666.229923.rna.23 RNA AZTQ01000049.1 21565 21637 1 + 73 tRNA-Val-TAC - none -
fig|6666666.229923.rna.24 RNA AZTQ01000049.1 21668 21740 2 + 73 tRNA-Val-TAC - none -
fig|6666666.229923.rna.25 RNA AZTQ01000050.1 13047 12974 -3 - 74 tRNA-Lys-CTT - none -
fig|6666666.229923.rna.26 RNA AZTQ01000050.1 13147 13075 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.229923.rna.27 RNA AZTQ01000064.1 55609 55691 1 + 83 tRNA-Leu-GAG - none -
fig|6666666.229923.rna.28 RNA AZTQ01000071.1 27284 27212 -2 - 73 tRNA-Asn-GTT - none -
fig|6666666.229923.rna.29 RNA AZTQ01000071.1 27364 27292 -1 - 73 tRNA-Phe-GAA - none -
fig|6666666.229923.rna.30 RNA AZTQ01000071.1 56082 56155 3 + 74 tRNA-Pro-TGG - none -
fig|6666666.229923.rna.31 RNA AZTQ01000071.1 56192 56265 2 + 74 tRNA-Arg-TCT - none -
fig|6666666.229923.rna.32 RNA AZTQ01000073.1 265 338 1 + 74 tRNA-Asp-GTC - none -
fig|6666666.229923.rna.33 RNA AZTQ01000073.1 376 448 1 + 73 tRNA-Trp-CCA - none -
fig|6666666.229923.rna.34 RNA AZTQ01000074.1 1507 1579 1 + 73 tRNA-Gly-GCC - none -
fig|6666666.229923.rna.35 RNA AZTQ01000078.1 2413 2496 1 + 84 tRNA-Leu-CAG - none -
fig|6666666.229923.rna.36 RNA AZTQ01000079.1 40617 40545 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.229923.rna.37 RNA AZTQ01000079.1 40756 40673 -1 - 84 tRNA-Leu-TAA - none -
fig|6666666.229923.rna.38 RNA AZTQ01000079.1 40833 40761 -3 - 73 tRNA-Gly-GCC - none -
fig|6666666.229923.rna.39 RNA AZTQ01000080.1 6151 6078 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.229923.rna.40 RNA AZTQ01000091.1 6627 6700 3 + 74 tRNA-Val-GAC - none -
fig|6666666.229923.rna.41 RNA AZTQ01000092.1 1856 1784 -2 - 73 tRNA-Asn-GTT - none -
fig|6666666.229923.rna.42 RNA AZTQ01000092.1 17717 17790 2 + 74 tRNA-Met-CAT - none -
fig|6666666.229923.rna.43 RNA AZTQ01000092.1 17799 17880 3 + 82 tRNA-Leu-TAG - none -
fig|6666666.229923.rna.44 RNA AZTQ01000092.1 17913 17984 3 + 72 tRNA-Gln-TTG - none -
fig|6666666.229923.rna.45 RNA AZTQ01000093.1 11240 11313 2 + 74 tRNA-Met-CAT - none -
fig|6666666.229923.rna.46 RNA AZTQ01000102.1 1042 969 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.229923.rna.47 RNA AZTQ01000102.1 1141 1068 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.229923.rna.48 RNA AZTQ01000117.1 137 209 2 + 73 tRNA-Glu-TTC - none -