fig|6666666.229924.peg.1 CDS AZTV01000001.1 1 1851 1 + 1851 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229924.peg.2 CDS AZTV01000001.1 2606 1971 -2 - 636 Galactitol utilization operon repressor - none -
fig|6666666.229924.peg.3 CDS AZTV01000002.1 2184 25 -3 - 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229924.peg.4 CDS AZTV01000002.1 2483 2271 -2 - 213 Copper chaperone Copper homeostasis
fig|6666666.229924.peg.5 CDS AZTV01000002.1 2742 2963 3 + 222 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229924.peg.6 CDS AZTV01000002.1 3024 3239 3 + 216 Mobile element protein - none -
fig|6666666.229924.peg.7 CDS AZTV01000003.1 114 1175 3 + 1062 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229924.peg.8 CDS AZTV01000003.1 1245 3380 3 + 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229924.peg.9 CDS AZTV01000004.1 19 579 1 + 561 FIG001587: exported protein - none -
fig|6666666.229924.peg.10 CDS AZTV01000004.1 656 1294 2 + 639 Hypothetical metal-binding enzyme, YcbL homolog - none -
fig|6666666.229924.peg.11 CDS AZTV01000004.1 1488 1366 -3 - 123 hypothetical protein - none -
fig|6666666.229924.peg.12 CDS AZTV01000004.1 1573 4380 1 + 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) - none -
fig|6666666.229924.peg.13 CDS AZTV01000004.1 5215 4406 -1 - 810 hypothetical protein - none -
fig|6666666.229924.peg.14 CDS AZTV01000005.1 1030 86 -1 - 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA processing
fig|6666666.229924.peg.15 CDS AZTV01000005.1 2895 1045 -3 - 1851 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229924.peg.16 CDS AZTV01000005.1 4124 2895 -2 - 1230 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229924.peg.17 CDS AZTV01000007.1 27 173 3 + 147 hypothetical protein - none -
fig|6666666.229924.peg.18 CDS AZTV01000008.1 637 140 -1 - 498 Phospholipid-binding protein - none -
fig|6666666.229924.peg.19 CDS AZTV01000008.1 1009 743 -1 - 267 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229924.peg.20 CDS AZTV01000009.1 57 674 3 + 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229924.peg.21 CDS AZTV01000009.1 861 3512 3 + 2652 Putative uncharacterized protein ydbH - none -
fig|6666666.229924.peg.22 CDS AZTV01000009.1 3509 3736 2 + 228 FIG00354920: hypothetical protein - none -
fig|6666666.229924.peg.23 CDS AZTV01000009.1 4536 4934 3 + 399 Integrase - none -
fig|6666666.229924.peg.24 CDS AZTV01000010.1 644 60 -2 - 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
LOS core oligosaccharide biosynthesis
fig|6666666.229924.peg.25 CDS AZTV01000011.1 699 13 -3 - 687 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229924.peg.26 CDS AZTV01000011.1 1922 699 -2 - 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229924.peg.27 CDS AZTV01000011.1 3324 1915 -3 - 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229924.peg.28 CDS AZTV01000011.1 3872 3351 -2 - 522 Type IV pilin PilA Type IV pilus
fig|6666666.229924.peg.29 CDS AZTV01000011.1 3925 4479 1 + 555 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229924.peg.30 CDS AZTV01000011.1 5423 4953 -2 - 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229924.peg.31 CDS AZTV01000012.1 5 2359 2 + 2355 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229924.peg.32 CDS AZTV01000012.1 2432 3451 2 + 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229924.peg.33 CDS AZTV01000012.1 3465 4301 3 + 837 COG0613, Predicted metal-dependent phosphoesterases (PHP family) - none -
fig|6666666.229924.peg.34 CDS AZTV01000013.1 63 2123 3 + 2061 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.229924.peg.35 CDS AZTV01000013.1 2451 2257 -3 - 195 Believed to be involved in assembly of Fe-S clusters - none -
fig|6666666.229924.peg.36 CDS AZTV01000013.1 2792 2451 -2 - 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229924.peg.37 CDS AZTV01000013.1 4663 2804 -1 - 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones
fig|6666666.229924.peg.38 CDS AZTV01000013.1 5205 4684 -3 - 522 Chaperone protein HscB Protein chaperones
fig|6666666.229924.peg.39 CDS AZTV01000013.1 5540 5217 -2 - 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis
fig|6666666.229924.peg.40 CDS AZTV01000014.1 756 13 -3 - 744 Putative membrane protein YeiH - none -
fig|6666666.229924.peg.41 CDS AZTV01000015.1 17 1021 2 + 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229924.peg.42 CDS AZTV01000015.1 1752 1108 -3 - 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD
fig|6666666.229924.peg.43 CDS AZTV01000015.1 3054 2278 -3 - 777 Sodium-dependent transporter - none -
fig|6666666.229924.peg.44 CDS AZTV01000015.1 3779 3048 -2 - 732 Sodium-dependent transporter - none -
fig|6666666.229924.peg.45 CDS AZTV01000016.1 107 742 2 + 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229924.peg.46 CDS AZTV01000016.1 747 1412 3 + 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229924.peg.47 CDS AZTV01000016.1 1423 2160 1 + 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229924.peg.48 CDS AZTV01000016.1 2178 2384 3 + 207 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229924.peg.49 CDS AZTV01000016.1 2381 2899 2 + 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229924.peg.50 CDS AZTV01000017.1 1522 548 -1 - 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229924.peg.51 CDS AZTV01000017.1 1625 2191 2 + 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229924.peg.52 CDS AZTV01000017.1 2347 3291 1 + 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229924.peg.53 CDS AZTV01000018.1 49 1275 1 + 1227 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.54 CDS AZTV01000018.1 1275 1997 3 + 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.55 CDS AZTV01000018.1 1994 2920 2 + 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.56 CDS AZTV01000018.1 2917 3363 1 + 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.57 CDS AZTV01000018.1 3360 3944 3 + 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.58 CDS AZTV01000018.1 3951 6224 3 + 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.59 CDS AZTV01000018.1 6354 6833 3 + 480 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.60 CDS AZTV01000018.1 6842 8065 2 + 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.61 CDS AZTV01000018.1 8058 8501 3 + 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.62 CDS AZTV01000018.1 8551 9279 1 + 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.63 CDS AZTV01000018.1 9310 10554 1 + 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.64 CDS AZTV01000019.1 88 258 1 + 171 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229924.peg.65 CDS AZTV01000019.1 363 944 3 + 582 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229924.peg.66 CDS AZTV01000019.1 1098 1214 3 + 117 hypothetical protein - none -
fig|6666666.229924.peg.67 CDS AZTV01000019.1 3105 1216 -3 - 1890 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria
fig|6666666.229924.peg.68 CDS AZTV01000021.1 75 206 3 + 132 hypothetical protein - none -
fig|6666666.229924.peg.69 CDS AZTV01000022.1 55 3327 1 + 3273 FIG00904191: hypothetical protein - none -
fig|6666666.229924.peg.70 CDS AZTV01000023.1 45 926 3 + 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229924.peg.71 CDS AZTV01000023.1 926 1816 2 + 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229924.peg.72 CDS AZTV01000023.1 1816 2673 1 + 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229924.peg.73 CDS AZTV01000023.1 2670 3518 3 + 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229924.peg.74 CDS AZTV01000023.1 3765 3493 -3 - 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229924.peg.75 CDS AZTV01000023.1 3910 4590 1 + 681 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229924.peg.76 CDS AZTV01000023.1 4653 5111 3 + 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229924.peg.77 CDS AZTV01000023.1 5111 5584 2 + 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229924.peg.78 CDS AZTV01000023.1 5593 7734 1 + 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229924.peg.79 CDS AZTV01000023.1 8237 7731 -2 - 507 FIG001674: hypothetical protein - none -
fig|6666666.229924.peg.80 CDS AZTV01000023.1 8300 9250 2 + 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p - none -
fig|6666666.229924.peg.81 CDS AZTV01000023.1 10361 9417 -2 - 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229924.peg.82 CDS AZTV01000023.1 11175 10351 -3 - 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229924.peg.83 CDS AZTV01000023.1 12540 11185 -3 - 1356 FIG00732228: membrane protein - none -
fig|6666666.229924.peg.84 CDS AZTV01000023.1 12826 12557 -1 - 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229924.peg.85 CDS AZTV01000024.1 3013 80 -1 - 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229924.peg.86 CDS AZTV01000024.1 3213 5678 3 + 2466 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229924.peg.87 CDS AZTV01000024.1 5687 6289 2 + 603 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229924.peg.88 CDS AZTV01000025.1 219 2171 3 + 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229924.peg.89 CDS AZTV01000025.1 2330 2737 2 + 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229924.peg.90 CDS AZTV01000026.1 611 126 -2 - 486 Putative membrane protein - none -
fig|6666666.229924.peg.91 CDS AZTV01000026.1 1219 614 -1 - 606 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229924.peg.92 CDS AZTV01000026.1 1821 1219 -3 - 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229924.peg.93 CDS AZTV01000026.1 1949 2329 2 + 381 FIG00782409: hypothetical protein - none -
fig|6666666.229924.peg.94 CDS AZTV01000026.1 4860 2845 -3 - 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229924.peg.95 CDS AZTV01000026.1 5100 4870 -3 - 231 FIG00696102: hypothetical protein - none -
fig|6666666.229924.peg.96 CDS AZTV01000026.1 5767 5204 -1 - 564 Outer membrane protein 18/16 - none -
fig|6666666.229924.peg.97 CDS AZTV01000026.1 5984 8785 2 + 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229924.peg.98 CDS AZTV01000027.1 1256 720 -2 - 537 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229924.peg.99 CDS AZTV01000028.1 432 617 3 + 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229924.peg.100 CDS AZTV01000028.1 650 1531 2 + 882 Protein rarD - none -
fig|6666666.229924.peg.101 CDS AZTV01000028.1 2326 1526 -1 - 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229924.peg.102 CDS AZTV01000028.1 2881 2330 -1 - 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229924.peg.103 CDS AZTV01000028.1 3425 2886 -2 - 540 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229924.peg.104 CDS AZTV01000028.1 3569 5182 2 + 1614 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229924.peg.105 CDS AZTV01000028.1 5308 5856 1 + 549 FIG00903983: hypothetical protein - none -
fig|6666666.229924.peg.106 CDS AZTV01000028.1 5910 6194 3 + 285 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229924.peg.107 CDS AZTV01000028.1 6520 6206 -1 - 315 Uncharacterized protein PM1437 - none -
fig|6666666.229924.peg.108 CDS AZTV01000028.1 6563 7438 2 + 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229924.peg.109 CDS AZTV01000028.1 7500 8255 3 + 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229924.peg.110 CDS AZTV01000029.1 172 912 1 + 741 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229924.peg.111 CDS AZTV01000029.1 918 2375 3 + 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229924.peg.112 CDS AZTV01000029.1 4552 2423 -1 - 2130 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229924.peg.113 CDS AZTV01000030.1 1118 216 -2 - 903 hypothetical protein - none -
fig|6666666.229924.peg.114 CDS AZTV01000030.1 3023 1164 -2 - 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229924.peg.115 CDS AZTV01000030.1 4414 3020 -1 - 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229924.peg.116 CDS AZTV01000031.1 22 363 1 + 342 hypothetical protein - none -
fig|6666666.229924.peg.117 CDS AZTV01000031.1 420 788 3 + 369 hypothetical protein - none -
fig|6666666.229924.peg.118 CDS AZTV01000031.1 809 2887 2 + 2079 hypothetical protein - none -
fig|6666666.229924.peg.119 CDS AZTV01000031.1 2900 3244 2 + 345 hypothetical protein - none -
fig|6666666.229924.peg.120 CDS AZTV01000031.1 3244 4110 1 + 867 hypothetical protein - none -
fig|6666666.229924.peg.121 CDS AZTV01000031.1 5394 4180 -3 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229924.peg.122 CDS AZTV01000032.1 85 1581 1 + 1497 Transcription termination protein NusA Transcription factors bacterial
fig|6666666.229924.peg.123 CDS AZTV01000033.1 78 1412 3 + 1335 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.229924.peg.124 CDS AZTV01000033.1 3024 1477 -3 - 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229924.peg.125 CDS AZTV01000033.1 6908 3027 -2 - 3882 Uncharacterized protein YtfN - none -
fig|6666666.229924.peg.126 CDS AZTV01000033.1 8795 6936 -2 - 1860 Uncharacterized protein YtfM precursor - none -
fig|6666666.229924.peg.127 CDS AZTV01000033.1 9336 8863 -3 - 474 Nitrate/nitrite response regulator protein - none -
fig|6666666.229924.peg.128 CDS AZTV01000034.1 186 2381 3 + 2196 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229924.peg.129 CDS AZTV01000037.1 164 1012 2 + 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229924.peg.130 CDS AZTV01000037.1 1210 1079 -1 - 132 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229924.peg.131 CDS AZTV01000038.1 19 1206 1 + 1188 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229924.peg.132 CDS AZTV01000038.1 1203 2342 3 + 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229924.peg.133 CDS AZTV01000038.1 2952 2413 -3 - 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229924.peg.134 CDS AZTV01000040.1 218 1435 2 + 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229924.peg.135 CDS AZTV01000040.1 1432 2259 1 + 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229924.peg.136 CDS AZTV01000040.1 3806 2271 -2 - 1536 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.229924.peg.137 CDS AZTV01000040.1 4535 3921 -2 - 615 GTP-binding protein EngB - none -
fig|6666666.229924.peg.138 CDS AZTV01000041.1 1213 179 -1 - 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229924.peg.139 CDS AZTV01000041.1 1716 1213 -3 - 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
Lipopolysaccharide assembly
fig|6666666.229924.peg.140 CDS AZTV01000041.1 1705 1833 1 + 129 hypothetical protein - none -
fig|6666666.229924.peg.141 CDS AZTV01000041.1 4446 1858 -3 - 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229924.peg.142 CDS AZTV01000041.1 4682 4566 -2 - 117 hypothetical protein - none -
fig|6666666.229924.peg.143 CDS AZTV01000041.1 5194 4637 -1 - 558 FIG00696423: hypothetical protein - none -
fig|6666666.229924.peg.144 CDS AZTV01000041.1 5515 5222 -1 - 294 nucleotidyltransferase - none -
fig|6666666.229924.peg.145 CDS AZTV01000041.1 5918 5499 -2 - 420 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229924.peg.146 CDS AZTV01000041.1 6836 6009 -2 - 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229924.peg.147 CDS AZTV01000041.1 7715 6852 -2 - 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229924.peg.148 CDS AZTV01000042.1 1249 161 -1 - 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229924.peg.149 CDS AZTV01000042.1 1395 1246 -3 - 150 hypothetical protein - none -
fig|6666666.229924.peg.150 CDS AZTV01000042.1 2635 1400 -1 - 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229924.peg.151 CDS AZTV01000042.1 3243 2647 -3 - 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229924.peg.152 CDS AZTV01000042.1 3876 3247 -3 - 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229924.peg.153 CDS AZTV01000042.1 4661 3876 -2 - 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229924.peg.154 CDS AZTV01000042.1 5889 4654 -3 - 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229924.peg.155 CDS AZTV01000042.1 6176 5892 -2 - 285 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229924.peg.156 CDS AZTV01000043.1 1721 381 -2 - 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229924.peg.157 CDS AZTV01000043.1 2351 1734 -2 - 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229924.peg.158 CDS AZTV01000043.1 5188 2444 -1 - 2745 Cell division protein FtsK Bacterial Cell Division;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229924.peg.159 CDS AZTV01000043.1 5671 5192 -1 - 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229924.peg.160 CDS AZTV01000043.1 5785 5958 1 + 174 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229924.peg.161 CDS AZTV01000043.1 7391 6387 -2 - 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.229924.peg.162 CDS AZTV01000043.1 8084 7437 -2 - 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229924.peg.163 CDS AZTV01000043.1 9696 8068 -3 - 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229924.peg.164 CDS AZTV01000043.1 10709 9705 -2 - 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229924.peg.165 CDS AZTV01000043.1 11111 10731 -2 - 381 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229924.peg.166 CDS AZTV01000044.1 24 314 3 + 291 hypothetical protein - none -
fig|6666666.229924.peg.167 CDS AZTV01000044.1 1677 379 -3 - 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229924.peg.168 CDS AZTV01000044.1 2730 1765 -3 - 966 tRNA (5-methoxyuridine) 34 synthase - none -
fig|6666666.229924.peg.169 CDS AZTV01000044.1 4213 2744 -1 - 1470 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229924.peg.170 CDS AZTV01000045.1 1390 1551 1 + 162 hypothetical protein - none -
fig|6666666.229924.peg.171 CDS AZTV01000045.1 1974 1816 -3 - 159 hypothetical protein - none -
fig|6666666.229924.peg.172 CDS AZTV01000046.1 868 119 -1 - 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229924.peg.173 CDS AZTV01000046.1 1567 896 -1 - 672 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229924.peg.174 CDS AZTV01000047.1 124 270 1 + 147 hypothetical protein - none -
fig|6666666.229924.peg.175 CDS AZTV01000047.1 1232 312 -2 - 921 tRNA pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA processing
fig|6666666.229924.peg.176 CDS AZTV01000047.1 1618 1232 -1 - 387 Ribosome-binding factor A - none -
fig|6666666.229924.peg.177 CDS AZTV01000048.1 38 1573 2 + 1536 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial
fig|6666666.229924.peg.178 CDS AZTV01000048.1 1584 2606 3 + 1023 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.229924.peg.179 CDS AZTV01000048.1 2613 3293 3 + 681 Ribonuclease III (EC 3.1.26.3) RNA processing and degradation, bacterial
fig|6666666.229924.peg.180 CDS AZTV01000048.1 3290 4198 2 + 909 GTP-binding protein Era Bacterial Cell Division;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229924.peg.181 CDS AZTV01000048.1 5657 4302 -2 - 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
mnm5U34 biosynthesis bacteria
fig|6666666.229924.peg.182 CDS AZTV01000048.1 6715 5786 -1 - 930 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229924.peg.183 CDS AZTV01000049.1 173 1252 2 + 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229924.peg.184 CDS AZTV01000049.1 1259 1879 2 + 621 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229924.peg.185 CDS AZTV01000049.1 1872 2657 3 + 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229924.peg.186 CDS AZTV01000050.1 1136 252 -2 - 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229924.peg.187 CDS AZTV01000051.1 1038 364 -3 - 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229924.peg.188 CDS AZTV01000051.1 1715 1041 -2 - 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway
fig|6666666.229924.peg.189 CDS AZTV01000051.1 1867 2145 1 + 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229924.peg.190 CDS AZTV01000051.1 2145 2840 3 + 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229924.peg.191 CDS AZTV01000051.1 2837 3316 2 + 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229924.peg.192 CDS AZTV01000051.1 3313 4323 1 + 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA processing
fig|6666666.229924.peg.193 CDS AZTV01000051.1 4356 5096 3 + 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229924.peg.194 CDS AZTV01000051.1 5124 5699 3 + 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229924.peg.195 CDS AZTV01000051.1 5741 5905 2 + 165 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229924.peg.196 CDS AZTV01000051.1 5922 7091 3 + 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229924.peg.197 CDS AZTV01000051.1 7613 7458 -2 - 156 Mobile element protein - none -
fig|6666666.229924.peg.198 CDS AZTV01000052.1 45 1709 3 + 1665 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229924.peg.199 CDS AZTV01000053.1 956 66 -2 - 891 hypothetical protein - none -
fig|6666666.229924.peg.200 CDS AZTV01000053.1 3004 959 -1 - 2046 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229924.peg.201 CDS AZTV01000053.1 3648 3037 -3 - 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229924.peg.202 CDS AZTV01000054.1 69 479 3 + 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Llipid A biosynthesis cluster
fig|6666666.229924.peg.203 CDS AZTV01000054.1 500 1288 2 + 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.229924.peg.204 CDS AZTV01000054.1 1373 2557 2 + 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) Llipid A biosynthesis cluster
fig|6666666.229924.peg.205 CDS AZTV01000054.1 2550 3149 3 + 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229924.peg.206 CDS AZTV01000054.1 3189 5057 3 + 1869 Putative transport protein - none -
fig|6666666.229924.peg.207 CDS AZTV01000054.1 5068 5676 1 + 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.208 CDS AZTV01000054.1 5687 6319 2 + 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.209 CDS AZTV01000054.1 6319 7248 1 + 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.210 CDS AZTV01000054.1 7338 7919 3 + 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229924.peg.211 CDS AZTV01000055.1 90 1508 3 + 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229924.peg.212 CDS AZTV01000055.1 1689 2726 3 + 1038 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229924.peg.213 CDS AZTV01000055.1 4231 3395 -1 - 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229924.peg.214 CDS AZTV01000055.1 5050 4247 -1 - 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229924.peg.215 CDS AZTV01000056.1 1115 645 -2 - 471 Arginine ABC transporter, permease protein ArtQ - none -
fig|6666666.229924.peg.216 CDS AZTV01000058.1 698 234 -2 - 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229924.peg.217 CDS AZTV01000058.1 1485 700 -3 - 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229924.peg.218 CDS AZTV01000058.1 1636 1815 1 + 180 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229924.peg.219 CDS AZTV01000058.1 1796 2455 2 + 660 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229924.peg.220 CDS AZTV01000058.1 3152 2520 -2 - 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229924.peg.221 CDS AZTV01000058.1 4047 3178 -3 - 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.222 CDS AZTV01000059.1 216 1181 3 + 966 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229924.peg.223 CDS AZTV01000059.1 1199 1996 2 + 798 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229924.peg.224 CDS AZTV01000059.1 2010 2846 3 + 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229924.peg.225 CDS AZTV01000059.1 2956 4131 1 + 1176 Cof protein - none -
fig|6666666.229924.peg.226 CDS AZTV01000060.1 77 2116 2 + 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229924.peg.227 CDS AZTV01000060.1 2742 2242 -3 - 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229924.peg.228 CDS AZTV01000060.1 4101 2803 -3 - 1299 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229924.peg.229 CDS AZTV01000062.1 15 875 3 + 861 Putative permease PerM (= YfgO) - none -
fig|6666666.229924.peg.230 CDS AZTV01000062.1 1768 1010 -1 - 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229924.peg.231 CDS AZTV01000062.1 2276 1803 -2 - 474 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229924.peg.232 CDS AZTV01000063.1 609 106 -3 - 504 Mercuric resistance operon regulatory protein - none -
fig|6666666.229924.peg.233 CDS AZTV01000063.1 948 637 -3 - 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229924.peg.234 CDS AZTV01000064.1 132 1136 3 + 1005 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229924.peg.235 CDS AZTV01000064.1 1145 1786 2 + 642 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229924.peg.236 CDS AZTV01000064.1 2919 1873 -3 - 1047 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229924.peg.237 CDS AZTV01000065.1 12 977 3 + 966 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229924.peg.238 CDS AZTV01000065.1 1193 1077 -2 - 117 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229924.peg.239 CDS AZTV01000065.1 2254 1322 -1 - 933 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229924.peg.240 CDS AZTV01000065.1 3302 2256 -2 - 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229924.peg.241 CDS AZTV01000065.1 3657 3304 -3 - 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229924.peg.242 CDS AZTV01000065.1 4008 3658 -3 - 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229924.peg.243 CDS AZTV01000066.1 158 1228 2 + 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229924.peg.244 CDS AZTV01000066.1 1297 2190 1 + 894 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229924.peg.245 CDS AZTV01000066.1 2190 3179 3 + 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229924.peg.246 CDS AZTV01000066.1 3179 4162 2 + 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229924.peg.247 CDS AZTV01000066.1 4162 4929 1 + 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229924.peg.248 CDS AZTV01000066.1 5900 4995 -2 - 906 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229924.peg.249 CDS AZTV01000067.1 824 126 -2 - 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229924.peg.250 CDS AZTV01000067.1 1487 840 -2 - 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229924.peg.251 CDS AZTV01000067.1 3079 1604 -1 - 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229924.peg.252 CDS AZTV01000068.1 62 421 2 + 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229924.peg.253 CDS AZTV01000068.1 421 1113 1 + 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229924.peg.254 CDS AZTV01000068.1 1115 2467 2 + 1353 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.229924.peg.255 CDS AZTV01000068.1 2797 2504 -1 - 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229924.peg.256 CDS AZTV01000069.1 1286 519 -2 - 768 Putative membrane protein YfcA - none -
fig|6666666.229924.peg.257 CDS AZTV01000069.1 2162 1290 -2 - 873 Murein endopeptidase - none -
fig|6666666.229924.peg.258 CDS AZTV01000069.1 3256 2183 -1 - 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229924.peg.259 CDS AZTV01000069.1 6601 3278 -1 - 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229924.peg.260 CDS AZTV01000069.1 8025 6610 -3 - 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229924.peg.261 CDS AZTV01000069.1 8648 8031 -2 - 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229924.peg.262 CDS AZTV01000069.1 8735 9535 2 + 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229924.peg.263 CDS AZTV01000070.1 595 11 -1 - 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229924.peg.264 CDS AZTV01000070.1 4217 684 -2 - 3534 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229924.peg.265 CDS AZTV01000071.1 1386 373 -3 - 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229924.peg.266 CDS AZTV01000071.1 2498 1386 -2 - 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229924.peg.267 CDS AZTV01000071.1 3334 2525 -1 - 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229924.peg.268 CDS AZTV01000071.1 4036 3413 -1 - 624 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229924.peg.269 CDS AZTV01000071.1 4698 4033 -3 - 666 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229924.peg.270 CDS AZTV01000071.1 5348 4695 -2 - 654 Substrate-specific component NikM of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229924.peg.271 CDS AZTV01000071.1 5851 5348 -1 - 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229924.peg.272 CDS AZTV01000071.1 6553 5858 -1 - 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229924.peg.273 CDS AZTV01000073.1 386 120 -2 - 267 hypothetical protein - none -
fig|6666666.229924.peg.274 CDS AZTV01000073.1 865 539 -1 - 327 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229924.peg.275 CDS AZTV01000073.1 1105 1506 1 + 402 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229924.peg.276 CDS AZTV01000073.1 1652 1515 -2 - 138 hypothetical protein - none -
fig|6666666.229924.peg.277 CDS AZTV01000073.1 1989 1711 -3 - 279 hypothetical protein - none -
fig|6666666.229924.peg.278 CDS AZTV01000073.1 3675 2011 -3 - 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229924.peg.279 CDS AZTV01000073.1 4621 3680 -1 - 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229924.peg.280 CDS AZTV01000073.1 6153 4624 -3 - 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229924.peg.281 CDS AZTV01000073.1 6795 6265 -3 - 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229924.peg.282 CDS AZTV01000073.1 7478 6894 -2 - 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229924.peg.283 CDS AZTV01000074.1 62 1993 2 + 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229924.peg.284 CDS AZTV01000075.1 180 341 3 + 162 Programmed cell death toxin ChpB - none -
fig|6666666.229924.peg.285 CDS AZTV01000075.1 1459 419 -1 - 1041 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229924.peg.286 CDS AZTV01000076.1 4433 165 -2 - 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229924.peg.287 CDS AZTV01000076.1 8321 4536 -2 - 3786 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229924.peg.288 CDS AZTV01000077.1 42 509 3 + 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway
fig|6666666.229924.peg.289 CDS AZTV01000077.1 533 1420 2 + 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229924.peg.290 CDS AZTV01000077.1 1611 2192 3 + 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229924.peg.291 CDS AZTV01000077.1 2192 2782 2 + 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229924.peg.292 CDS AZTV01000078.1 1489 119 -1 - 1371 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229924.peg.293 CDS AZTV01000079.1 142 3006 1 + 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229924.peg.294 CDS AZTV01000080.1 29 751 2 + 723 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229924.peg.295 CDS AZTV01000080.1 763 1566 1 + 804 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229924.peg.296 CDS AZTV01000080.1 3315 1942 -3 - 1374 sodium-dependent transporter - none -
fig|6666666.229924.peg.297 CDS AZTV01000080.1 3666 3340 -3 - 327 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229924.peg.298 CDS AZTV01000081.1 54 221 3 + 168 LSU ribosomal protein L15p (L27Ae) - none -
fig|6666666.229924.peg.299 CDS AZTV01000081.1 225 1550 3 + 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229924.peg.300 CDS AZTV01000081.1 1828 2184 1 + 357 SSU ribosomal protein S13p (S18e) - none -
fig|6666666.229924.peg.301 CDS AZTV01000081.1 2200 2589 1 + 390 SSU ribosomal protein S11p (S14e) - none -
fig|6666666.229924.peg.302 CDS AZTV01000081.1 2619 3239 3 + 621 SSU ribosomal protein S4p (S9e) - none -
fig|6666666.229924.peg.303 CDS AZTV01000081.1 3268 4257 1 + 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229924.peg.304 CDS AZTV01000082.1 33 1124 3 + 1092 Putative exported protein precursor - none -
fig|6666666.229924.peg.305 CDS AZTV01000082.1 2572 1256 -1 - 1317 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229924.peg.306 CDS AZTV01000082.1 2712 3842 3 + 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229924.peg.307 CDS AZTV01000082.1 3839 4753 2 + 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229924.peg.308 CDS AZTV01000082.1 4918 5964 1 + 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229924.peg.309 CDS AZTV01000082.1 6453 6025 -3 - 429 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.229924.peg.310 CDS AZTV01000082.1 7868 6495 -2 - 1374 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229924.peg.311 CDS AZTV01000082.1 8754 7885 -3 - 870 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229924.peg.312 CDS AZTV01000082.1 10311 8770 -3 - 1542 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229924.peg.313 CDS AZTV01000082.1 10872 10324 -3 - 549 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229924.peg.314 CDS AZTV01000082.1 11356 10886 -1 - 471 ATP synthase F0 sector subunit b - none -
fig|6666666.229924.peg.315 CDS AZTV01000082.1 11660 11406 -2 - 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) - none -
fig|6666666.229924.peg.316 CDS AZTV01000084.1 128 754 2 + 627 Probable phospholipase protein - none -
fig|6666666.229924.peg.317 CDS AZTV01000085.1 72 551 3 + 480 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229924.peg.318 CDS AZTV01000085.1 558 1640 3 + 1083 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229924.peg.319 CDS AZTV01000085.1 1618 2628 1 + 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229924.peg.320 CDS AZTV01000085.1 4550 2703 -2 - 1848 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229924.peg.321 CDS AZTV01000085.1 5911 4691 -1 - 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) - none -
fig|6666666.229924.peg.322 CDS AZTV01000086.1 10 132 1 + 123 hypothetical protein - none -
fig|6666666.229924.peg.323 CDS AZTV01000086.1 242 1201 2 + 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229924.peg.324 CDS AZTV01000086.1 1615 1400 -1 - 216 Thioredoxin - none -
fig|6666666.229924.peg.325 CDS AZTV01000086.1 2818 1823 -1 - 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229924.peg.326 CDS AZTV01000087.1 19 1452 1 + 1434 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229924.peg.327 CDS AZTV01000087.1 1530 2678 3 + 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229924.peg.328 CDS AZTV01000087.1 2756 3268 2 + 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229924.peg.329 CDS AZTV01000087.1 4382 3372 -2 - 1011 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) - none -
fig|6666666.229924.peg.330 CDS AZTV01000087.1 5281 4385 -1 - 897 Inosose dehydratase (EC 4.2.1.44) - none -
fig|6666666.229924.peg.331 CDS AZTV01000087.1 7108 5336 -1 - 1773 Epi-inositol hydrolase (EC 3.7.1.-) - none -
fig|6666666.229924.peg.332 CDS AZTV01000089.1 39 2168 3 + 2130 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229924.peg.333 CDS AZTV01000089.1 2253 3155 3 + 903 Lipoprotein nlpI precursor - none -
fig|6666666.229924.peg.334 CDS AZTV01000089.1 3282 5069 3 + 1788 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229924.peg.335 CDS AZTV01000089.1 5763 5152 -3 - 612 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229924.peg.336 CDS AZTV01000090.1 45 1049 3 + 1005 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229924.peg.337 CDS AZTV01000090.1 1033 1893 1 + 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229924.peg.338 CDS AZTV01000090.1 1893 2666 3 + 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229924.peg.339 CDS AZTV01000090.1 2713 3894 1 + 1182 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229924.peg.340 CDS AZTV01000090.1 4018 4914 1 + 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions
fig|6666666.229924.peg.341 CDS AZTV01000090.1 6310 4994 -1 - 1317 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229924.peg.342 CDS AZTV01000091.1 1546 1289 -1 - 258 YrbA protein Broadly distributed proteins not in subsystems
fig|6666666.229924.peg.343 CDS AZTV01000091.1 1815 1546 -3 - 270 Uncharacterized protein YrbB - none -
fig|6666666.229924.peg.344 CDS AZTV01000091.1 2550 1909 -3 - 642 Uncharacterized ABC transporter, auxiliary component YrbC Lipopolysaccharide assembly
fig|6666666.229924.peg.345 CDS AZTV01000091.1 3088 2579 -1 - 510 Uncharacterized ABC transporter, periplasmic component YrbD Lipopolysaccharide assembly
fig|6666666.229924.peg.346 CDS AZTV01000091.1 3896 3111 -2 - 786 Uncharacterized ABC transporter, permease component YrbE Lipopolysaccharide assembly
fig|6666666.229924.peg.347 CDS AZTV01000091.1 4687 3890 -1 - 798 Uncharacterized ABC transporter, ATP-binding protein YrbF Lipopolysaccharide assembly
fig|6666666.229924.peg.348 CDS AZTV01000091.1 4857 4973 3 + 117 hypothetical protein - none -
fig|6666666.229924.peg.349 CDS AZTV01000091.1 4970 5545 2 + 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229924.peg.350 CDS AZTV01000091.1 5526 6044 3 + 519 LptA, protein essential for LPS transport across the periplasm Lipopolysaccharide assembly
fig|6666666.229924.peg.351 CDS AZTV01000091.1 6050 6775 2 + 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB Lipopolysaccharide assembly
fig|6666666.229924.peg.352 CDS AZTV01000091.1 6779 7312 2 + 534 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229924.peg.353 CDS AZTV01000091.1 7340 8194 2 + 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229924.peg.354 CDS AZTV01000091.1 9534 8200 -3 - 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229924.peg.355 CDS AZTV01000091.1 10734 9541 -3 - 1194 FIG074102: hypothetical protein - none -
fig|6666666.229924.peg.356 CDS AZTV01000092.1 40 456 1 + 417 Probable phospholipase protein - none -
fig|6666666.229924.peg.357 CDS AZTV01000092.1 456 1607 3 + 1152 FOG: TPR repeat, SEL1 subfamily - none -
fig|6666666.229924.peg.358 CDS AZTV01000093.1 144 3254 3 + 3111 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229924.peg.359 CDS AZTV01000093.1 3352 4182 1 + 831 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229924.peg.360 CDS AZTV01000093.1 4175 4888 2 + 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229924.peg.361 CDS AZTV01000093.1 5038 5154 1 + 117 hypothetical protein - none -
fig|6666666.229924.peg.362 CDS AZTV01000094.1 106 1641 1 + 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229924.peg.363 CDS AZTV01000094.1 1652 3076 2 + 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229924.peg.364 CDS AZTV01000095.1 76 1890 1 + 1815 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229924.peg.365 CDS AZTV01000095.1 1933 2454 1 + 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229924.peg.366 CDS AZTV01000095.1 2592 4022 3 + 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229924.peg.367 CDS AZTV01000095.1 4025 5350 2 + 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229924.peg.368 CDS AZTV01000095.1 5337 6476 3 + 1140 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229924.peg.369 CDS AZTV01000095.1 6478 7149 1 + 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229924.peg.370 CDS AZTV01000095.1 7139 7630 2 + 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229924.peg.371 CDS AZTV01000095.1 7637 7948 2 + 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229924.peg.372 CDS AZTV01000095.1 8149 8814 1 + 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229924.peg.373 CDS AZTV01000095.1 8854 8973 1 + 120 hypothetical protein - none -
fig|6666666.229924.peg.374 CDS AZTV01000096.1 42 1184 3 + 1143 Translation elongation factor Tu Translation elongation factors bacterial
fig|6666666.229924.peg.375 CDS AZTV01000096.1 2120 1248 -2 - 873 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229924.peg.376 CDS AZTV01000097.1 18 1046 3 + 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229924.peg.377 CDS AZTV01000097.1 1055 1651 2 + 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229924.peg.378 CDS AZTV01000097.1 2623 1718 -1 - 906 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229924.peg.379 CDS AZTV01000098.1 1 483 1 + 483 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229924.peg.380 CDS AZTV01000098.1 562 1290 1 + 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229924.peg.381 CDS AZTV01000098.1 1277 2338 2 + 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229924.peg.382 CDS AZTV01000098.1 3973 2483 -1 - 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826
fig|6666666.229924.peg.383 CDS AZTV01000099.1 3 206 3 + 204 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229924.peg.384 CDS AZTV01000099.1 222 2018 3 + 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229924.peg.385 CDS AZTV01000099.1 2029 3333 1 + 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229924.peg.386 CDS AZTV01000102.1 87 416 3 + 330 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229924.peg.387 CDS AZTV01000102.1 501 1103 3 + 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229924.peg.388 CDS AZTV01000102.1 1135 3072 1 + 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229924.peg.389 CDS AZTV01000103.1 1027 98 -1 - 930 D-alanine--D-alanine ligase (EC 6.3.2.4) cell division cluster containing FtsQ
fig|6666666.229924.peg.390 CDS AZTV01000103.1 2470 1040 -1 - 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) cell division cluster containing FtsQ
fig|6666666.229924.peg.391 CDS AZTV01000103.1 3392 2541 -2 - 852 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) - none -
fig|6666666.229924.peg.392 CDS AZTV01000104.1 324 494 3 + 171 hypothetical protein - none -
fig|6666666.229924.peg.393 CDS AZTV01000105.1 193 1827 1 + 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229924.peg.394 CDS AZTV01000105.1 3977 1896 -2 - 2082 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229924.peg.395 CDS AZTV01000106.1 1546 80 -1 - 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229924.peg.396 CDS AZTV01000106.1 2925 1795 -3 - 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229924.peg.397 CDS AZTV01000106.1 4913 3063 -2 - 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229924.peg.398 CDS AZTV01000106.1 5963 4977 -2 - 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229924.peg.399 CDS AZTV01000107.1 754 8 -1 - 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229924.peg.400 CDS AZTV01000107.1 1694 768 -2 - 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229924.peg.401 CDS AZTV01000107.1 1850 4351 2 + 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229924.peg.402 CDS AZTV01000108.1 94 951 1 + 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.229924.peg.403 CDS AZTV01000108.1 2674 1040 -1 - 1635 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229924.peg.404 CDS AZTV01000108.1 3084 2794 -3 - 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229924.peg.405 CDS AZTV01000108.1 3653 3171 -2 - 483 FxsA protein - none -
fig|6666666.229924.peg.406 CDS AZTV01000110.1 936 3068 3 + 2133 hypothetical protein - none -
fig|6666666.229924.peg.407 CDS AZTV01000110.1 3072 3221 3 + 150 hypothetical protein - none -
fig|6666666.229924.peg.408 CDS AZTV01000111.1 935 111 -2 - 825 Sulfate transporter, CysZ-type - none -
fig|6666666.229924.peg.409 CDS AZTV01000111.1 980 2113 2 + 1134 Cell division protein ZipA - none -
fig|6666666.229924.peg.410 CDS AZTV01000111.1 2223 2110 -3 - 114 hypothetical protein - none -
fig|6666666.229924.peg.411 CDS AZTV01000111.1 2217 4232 3 + 2016 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229924.peg.412 CDS AZTV01000111.1 4879 4301 -1 - 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229924.peg.413 CDS AZTV01000111.1 5115 4882 -3 - 234 unknown - none -
fig|6666666.229924.peg.414 CDS AZTV01000111.1 6208 5180 -1 - 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.229924.peg.415 CDS AZTV01000111.1 6398 6231 -2 - 168 hypothetical protein - none -
fig|6666666.229924.peg.416 CDS AZTV01000112.1 294 154 -3 - 141 hypothetical protein - none -
fig|6666666.229924.peg.417 CDS AZTV01000112.1 446 297 -2 - 150 hypothetical protein - none -
fig|6666666.229924.peg.418 CDS AZTV01000112.1 1537 533 -1 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229924.peg.419 CDS AZTV01000112.1 1593 2042 3 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229924.peg.420 CDS AZTV01000112.1 2052 2495 3 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial
fig|6666666.229924.peg.421 CDS AZTV01000112.1 5886 2497 -3 - 3390 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229924.peg.422 CDS AZTV01000112.1 6234 5932 -3 - 303 FIG00696353: hypothetical protein - none -
fig|6666666.229924.peg.423 CDS AZTV01000112.1 6904 6209 -1 - 696 FIG00696574: hypothetical protein - none -
fig|6666666.229924.peg.424 CDS AZTV01000112.1 7617 6901 -3 - 717 Type II secretory pathway, component PulJ - none -
fig|6666666.229924.peg.425 CDS AZTV01000112.1 8248 7631 -1 - 618 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229924.peg.426 CDS AZTV01000113.1 151 2391 1 + 2241 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229924.peg.427 CDS AZTV01000114.1 224 754 2 + 531 VgrG protein - none -
fig|6666666.229924.peg.428 CDS AZTV01000115.1 130 627 1 + 498 putative adhesin/invasin - none -
fig|6666666.229924.peg.429 CDS AZTV01000115.1 2377 731 -1 - 1647 ABC transporter ATP-binding protein - none -
fig|6666666.229924.peg.430 CDS AZTV01000116.1 400 1749 1 + 1350 FOG: TPR repeat - none -
fig|6666666.229924.peg.431 CDS AZTV01000116.1 1773 2045 3 + 273 FIG003021: Membrane protein - none -
fig|6666666.229924.peg.432 CDS AZTV01000116.1 2042 3478 2 + 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) Coenzyme A Biosynthesis
fig|6666666.229924.peg.433 CDS AZTV01000117.1 66 284 3 + 219 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229924.peg.434 CDS AZTV01000117.1 1424 381 -2 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229924.peg.435 CDS AZTV01000117.1 1513 2238 1 + 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229924.peg.436 CDS AZTV01000117.1 2781 2287 -3 - 495 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229924.peg.437 CDS AZTV01000117.1 4065 2782 -3 - 1284 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) LOS core oligosaccharide biosynthesis
fig|6666666.229924.peg.438 CDS AZTV01000117.1 4164 4925 3 + 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229924.peg.439 CDS AZTV01000117.1 5141 4983 -2 - 159 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229924.peg.440 CDS AZTV01000118.1 816 220 -3 - 597 hypothetical protein - none -
fig|6666666.229924.peg.441 CDS AZTV01000118.1 2808 829 -3 - 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229924.peg.442 CDS AZTV01000118.1 5153 2808 -2 - 2346 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229924.peg.443 CDS AZTV01000119.1 1825 1031 -1 - 795 Glutathione synthetase (EC 6.3.2.3) Cluster containing Glutathione synthetase;
Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229924.peg.444 CDS AZTV01000119.1 2832 1825 -3 - 1008 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229924.peg.445 CDS AZTV01000120.1 69 1058 3 + 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) - none -
fig|6666666.229924.peg.446 CDS AZTV01000121.1 62 805 2 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.447 CDS AZTV01000121.1 813 2225 3 + 1413 Putative cell division protein precursor - none -
fig|6666666.229924.peg.448 CDS AZTV01000121.1 3161 2298 -2 - 864 Permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229924.peg.449 CDS AZTV01000121.1 4043 3303 -2 - 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229924.peg.450 CDS AZTV01000121.1 6501 4189 -3 - 2313 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229924.peg.451 CDS AZTV01000121.1 7421 6600 -2 - 822 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229924.peg.452 CDS AZTV01000122.1 72 1268 3 + 1197 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229924.peg.453 CDS AZTV01000122.1 1282 4380 1 + 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229924.peg.454 CDS AZTV01000122.1 4534 5151 1 + 618 Orf2 - none -
fig|6666666.229924.peg.455 CDS AZTV01000122.1 5164 5334 1 + 171 Orf2 - none -
fig|6666666.229924.peg.456 CDS AZTV01000122.1 6012 5353 -3 - 660 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229924.peg.457 CDS AZTV01000122.1 6384 6028 -3 - 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.458 CDS AZTV01000122.1 8641 6410 -1 - 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I Stringent Response, (p)ppGpp metabolism
fig|6666666.229924.peg.459 CDS AZTV01000122.1 9967 8651 -1 - 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229924.peg.460 CDS AZTV01000122.1 10655 9969 -2 - 687 DNA recombination and repair protein RecO DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229924.peg.461 CDS AZTV01000122.1 11811 10963 -3 - 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Translation elongation factors bacterial
fig|6666666.229924.peg.462 CDS AZTV01000122.1 11917 11804 -1 - 114 hypothetical protein - none -
fig|6666666.229924.peg.463 CDS AZTV01000122.1 12688 11966 -1 - 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965
fig|6666666.229924.peg.464 CDS AZTV01000122.1 13152 12763 -3 - 390 Patatin-like phospholipase - none -
fig|6666666.229924.peg.465 CDS AZTV01000122.1 14158 13271 -1 - 888 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229924.peg.466 CDS AZTV01000122.1 15049 14186 -1 - 864 Protein YicC - none -
fig|6666666.229924.peg.467 CDS AZTV01000122.1 15167 15883 2 + 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229924.peg.468 CDS AZTV01000122.1 15893 16537 2 + 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229924.peg.469 CDS AZTV01000122.1 16619 17494 2 + 876 DnaJ-like protein DjlA - none -
fig|6666666.229924.peg.470 CDS AZTV01000122.1 17498 18466 2 + 969 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death
fig|6666666.229924.peg.471 CDS AZTV01000122.1 19545 18487 -3 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229924.peg.472 CDS AZTV01000122.1 21081 19561 -3 - 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229924.peg.473 CDS AZTV01000122.1 21884 21162 -2 - 723 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229924.peg.474 CDS AZTV01000123.1 127 1533 1 + 1407 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229924.peg.475 CDS AZTV01000123.1 1939 1637 -1 - 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229924.peg.476 CDS AZTV01000123.1 2850 1972 -3 - 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229924.peg.477 CDS AZTV01000123.1 3966 2869 -3 - 1098 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229924.peg.478 CDS AZTV01000123.1 4995 3991 -3 - 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229924.peg.479 CDS AZTV01000123.1 6040 5009 -1 - 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229924.peg.480 CDS AZTV01000123.1 7566 6049 -3 - 1518 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229924.peg.481 CDS AZTV01000124.1 1249 38 -1 - 1212 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229924.peg.482 CDS AZTV01000125.1 49 1494 1 + 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis
fig|6666666.229924.peg.483 CDS AZTV01000126.1 1495 245 -1 - 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229924.peg.484 CDS AZTV01000126.1 1632 1513 -3 - 120 hypothetical protein - none -
fig|6666666.229924.peg.485 CDS AZTV01000126.1 1755 2069 3 + 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229924.peg.486 CDS AZTV01000126.1 2066 3955 2 + 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229924.peg.487 CDS AZTV01000126.1 4052 6472 2 + 2421 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229924.peg.488 CDS AZTV01000126.1 7354 6527 -1 - 828 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229924.peg.489 CDS AZTV01000127.1 158 1861 2 + 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229924.peg.490 CDS AZTV01000127.1 1876 2901 1 + 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229924.peg.491 CDS AZTV01000127.1 2917 3231 1 + 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229924.peg.492 CDS AZTV01000128.1 131 472 2 + 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229924.peg.493 CDS AZTV01000128.1 474 689 3 + 216 hypothetical protein - none -
fig|6666666.229924.peg.494 CDS AZTV01000128.1 735 3128 3 + 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Type IV pilus
fig|6666666.229924.peg.495 CDS AZTV01000129.1 237 416 3 + 180 hypothetical protein - none -
fig|6666666.229924.peg.496 CDS AZTV01000129.1 542 691 2 + 150 hypothetical protein - none -
fig|6666666.229924.peg.497 CDS AZTV01000130.1 780 7 -3 - 774 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229924.peg.498 CDS AZTV01000131.1 89 904 2 + 816 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229924.peg.499 CDS AZTV01000131.1 904 1047 1 + 144 hypothetical protein - none -
fig|6666666.229924.peg.500 CDS AZTV01000131.1 1031 2065 2 + 1035 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229924.peg.501 CDS AZTV01000131.1 2062 4779 1 + 2718 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229924.peg.502 CDS AZTV01000131.1 4894 5568 1 + 675 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229924.peg.503 CDS AZTV01000131.1 5565 6962 3 + 1398 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229924.peg.504 CDS AZTV01000131.1 6959 7342 2 + 384 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229924.peg.505 CDS AZTV01000131.1 7355 8221 2 + 867 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229924.peg.506 CDS AZTV01000131.1 8366 9016 2 + 651 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229924.peg.507 CDS AZTV01000132.1 87 1370 3 + 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229924.peg.508 CDS AZTV01000133.1 338 33 -2 - 306 Z-ring-associated protein ZapA - none -
fig|6666666.229924.peg.509 CDS AZTV01000133.1 332 1066 2 + 735 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229924.peg.510 CDS AZTV01000133.1 1096 2382 1 + 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229924.peg.511 CDS AZTV01000134.1 20 493 2 + 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229924.peg.512 CDS AZTV01000134.1 500 925 2 + 426 Transcription termination protein NusB Transcription factors bacterial
fig|6666666.229924.peg.513 CDS AZTV01000134.1 944 1927 2 + 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.229924.peg.514 CDS AZTV01000134.1 1937 2428 2 + 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.515 CDS AZTV01000135.1 138 19 -3 - 120 hypothetical protein - none -
fig|6666666.229924.peg.516 CDS AZTV01000135.1 160 1086 1 + 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229924.peg.517 CDS AZTV01000135.1 1256 2383 2 + 1128 Fic family protein - none -
fig|6666666.229924.peg.518 CDS AZTV01000135.1 2403 3446 3 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229924.peg.519 CDS AZTV01000135.1 3564 5459 3 + 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229924.peg.520 CDS AZTV01000135.1 6188 5553 -2 - 636 Cytochrome c-type protein NapC - none -
fig|6666666.229924.peg.521 CDS AZTV01000135.1 6651 6202 -3 - 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229924.peg.522 CDS AZTV01000135.1 7570 6689 -1 - 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229924.peg.523 CDS AZTV01000135.1 8409 7570 -3 - 840 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229924.peg.524 CDS AZTV01000135.1 10919 8457 -2 - 2463 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229924.peg.525 CDS AZTV01000135.1 11261 10977 -2 - 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229924.peg.526 CDS AZTV01000136.1 44 1648 2 + 1605 hypothetical protein - none -
fig|6666666.229924.peg.527 CDS AZTV01000136.1 1668 2858 3 + 1191 hypothetical protein - none -
fig|6666666.229924.peg.528 CDS AZTV01000137.1 36 1583 3 + 1548 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229924.peg.529 CDS AZTV01000137.1 1594 2184 1 + 591 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229924.peg.530 CDS AZTV01000137.1 2258 2650 2 + 393 putative - none -
fig|6666666.229924.peg.531 CDS AZTV01000137.1 3104 2640 -2 - 465 hypothetical protein - none -
fig|6666666.229924.peg.532 CDS AZTV01000138.1 2312 1290 -2 - 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229924.peg.533 CDS AZTV01000138.1 3097 2333 -1 - 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229924.peg.534 CDS AZTV01000138.1 3797 3135 -2 - 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229924.peg.535 CDS AZTV01000138.1 4025 3801 -2 - 225 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229924.peg.536 CDS AZTV01000138.1 4303 4172 -1 - 132 hypothetical protein - none -
fig|6666666.229924.peg.537 CDS AZTV01000139.1 36 158 3 + 123 hypothetical protein - none -
fig|6666666.229924.peg.538 CDS AZTV01000141.1 59 1558 2 + 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis
fig|6666666.229924.peg.539 CDS AZTV01000142.1 28 1485 1 + 1458 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229924.peg.540 CDS AZTV01000144.1 1160 6 -2 - 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229924.peg.541 CDS AZTV01000144.1 1637 1368 -2 - 270 SSU ribosomal protein S15p (S13e) - none -
fig|6666666.229924.peg.542 CDS AZTV01000144.1 2482 1733 -1 - 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229924.peg.543 CDS AZTV01000144.1 4241 2535 -2 - 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229924.peg.544 CDS AZTV01000144.1 5536 4232 -1 - 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229924.peg.545 CDS AZTV01000144.1 5653 6867 1 + 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229924.peg.546 CDS AZTV01000144.1 7719 6988 -3 - 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229924.peg.547 CDS AZTV01000145.1 30 1496 3 + 1467 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229924.peg.548 CDS AZTV01000145.1 1489 1989 1 + 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate biosynthesis cluster
fig|6666666.229924.peg.549 CDS AZTV01000145.1 2305 2060 -1 - 246 hypothetical protein - none -
fig|6666666.229924.peg.550 CDS AZTV01000146.1 1967 234 -2 - 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229924.peg.551 CDS AZTV01000147.1 582 28 -3 - 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) - none -
fig|6666666.229924.peg.552 CDS AZTV01000147.1 1517 582 -2 - 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) - none -
fig|6666666.229924.peg.553 CDS AZTV01000148.1 12 965 3 + 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229924.peg.554 CDS AZTV01000148.1 978 2834 3 + 1857 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229924.peg.555 CDS AZTV01000148.1 2834 4567 2 + 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229924.peg.556 CDS AZTV01000148.1 4818 5750 3 + 933 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.229924.peg.557 CDS AZTV01000149.1 2043 367 -3 - 1677 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229924.peg.558 CDS AZTV01000150.1 1558 77 -1 - 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229924.peg.559 CDS AZTV01000150.1 3265 1595 -1 - 1671 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229924.peg.560 CDS AZTV01000150.1 5951 3294 -2 - 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229924.peg.561 CDS AZTV01000151.1 695 814 2 + 120 hypothetical protein - none -
fig|6666666.229924.peg.562 CDS AZTV01000151.1 1783 1199 -1 - 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229924.peg.563 CDS AZTV01000151.1 2443 1793 -1 - 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229924.peg.564 CDS AZTV01000153.1 911 3 -2 - 909 Putative surface protein - none -
fig|6666666.229924.peg.565 CDS AZTV01000153.1 1031 1720 2 + 690 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229924.peg.566 CDS AZTV01000153.1 1765 1941 1 + 177 Permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229924.peg.567 CDS AZTV01000153.1 1938 2627 3 + 690 Permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229924.peg.568 CDS AZTV01000153.1 2711 3034 2 + 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229924.peg.569 CDS AZTV01000153.1 3151 4692 1 + 1542 Esterase/lipase - none -
fig|6666666.229924.peg.570 CDS AZTV01000153.1 6287 4947 -2 - 1341 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229924.peg.571 CDS AZTV01000154.1 69 413 3 + 345 Inositol transport system sugar-binding protein - none -
fig|6666666.229924.peg.572 CDS AZTV01000154.1 497 1429 2 + 933 Inositol transport system sugar-binding protein - none -
fig|6666666.229924.peg.573 CDS AZTV01000154.1 1498 3003 1 + 1506 Inositol transport system ATP-binding protein - none -
fig|6666666.229924.peg.574 CDS AZTV01000154.1 3054 4007 3 + 954 Inositol transport system permease protein - none -
fig|6666666.229924.peg.575 CDS AZTV01000154.1 6712 4091 -1 - 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229924.peg.576 CDS AZTV01000155.1 1372 191 -1 - 1182 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.229924.peg.577 CDS AZTV01000155.1 2733 1390 -3 - 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229924.peg.578 CDS AZTV01000155.1 3401 2736 -2 - 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229924.peg.579 CDS AZTV01000155.1 3859 3413 -1 - 447 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229924.peg.580 CDS AZTV01000156.1 1584 76 -3 - 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229924.peg.581 CDS AZTV01000156.1 2543 1641 -2 - 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift
fig|6666666.229924.peg.582 CDS AZTV01000157.1 232 1035 1 + 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229924.peg.583 CDS AZTV01000157.1 1091 2236 2 + 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229924.peg.584 CDS AZTV01000157.1 2336 2449 2 + 114 hypothetical protein - none -
fig|6666666.229924.peg.585 CDS AZTV01000157.1 2941 2441 -1 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229924.peg.586 CDS AZTV01000157.1 3677 2982 -2 - 696 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229924.peg.587 CDS AZTV01000159.1 34 1134 1 + 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229924.peg.588 CDS AZTV01000159.1 1195 3675 1 + 2481 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229924.peg.589 CDS AZTV01000159.1 4525 3746 -1 - 780 Protein of unknown function DUF419 - none -
fig|6666666.229924.peg.590 CDS AZTV01000159.1 4755 6212 3 + 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229924.peg.591 CDS AZTV01000159.1 6427 6681 1 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229924.peg.592 CDS AZTV01000159.1 6678 6830 3 + 153 StbE replicon stabilization toxin - none -
fig|6666666.229924.peg.593 CDS AZTV01000159.1 6790 6960 1 + 171 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229924.peg.594 CDS AZTV01000159.1 7758 6973 -3 - 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA processing
fig|6666666.229924.peg.595 CDS AZTV01000159.1 8311 7919 -1 - 393 SSU ribosomal protein S9p (S16e) - none -
fig|6666666.229924.peg.596 CDS AZTV01000159.1 8756 8328 -2 - 429 LSU ribosomal protein L13p (L13Ae) - none -
fig|6666666.229924.peg.597 CDS AZTV01000160.1 1233 496 -3 - 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229924.peg.598 CDS AZTV01000160.1 2209 1235 -1 - 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229924.peg.599 CDS AZTV01000160.1 2316 3104 3 + 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229924.peg.600 CDS AZTV01000160.1 3717 3142 -3 - 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229924.peg.601 CDS AZTV01000161.1 972 49 -3 - 924 NrfD protein - none -
fig|6666666.229924.peg.602 CDS AZTV01000161.1 1688 1011 -2 - 678 NrfC protein - none -
fig|6666666.229924.peg.603 CDS AZTV01000161.1 2350 1685 -1 - 666 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229924.peg.604 CDS AZTV01000161.1 3956 2424 -2 - 1533 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229924.peg.605 CDS AZTV01000162.1 109 249 1 + 141 hypothetical protein - none -
fig|6666666.229924.peg.606 CDS AZTV01000162.1 833 201 -2 - 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229924.peg.607 CDS AZTV01000162.1 1004 2329 2 + 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229924.peg.608 CDS AZTV01000163.1 123 680 3 + 558 hypothetical protein - none -
fig|6666666.229924.peg.609 CDS AZTV01000163.1 2421 1012 -3 - 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229924.peg.610 CDS AZTV01000163.1 2491 3003 1 + 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229924.peg.611 CDS AZTV01000163.1 3097 3252 1 + 156 hypothetical protein - none -
fig|6666666.229924.peg.612 CDS AZTV01000163.1 3245 3526 2 + 282 hypothetical protein - none -
fig|6666666.229924.peg.613 CDS AZTV01000163.1 3529 4317 1 + 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229924.peg.614 CDS AZTV01000163.1 4811 4344 -2 - 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229924.peg.615 CDS AZTV01000163.1 5232 5113 -3 - 120 hypothetical protein - none -
fig|6666666.229924.peg.616 CDS AZTV01000163.1 7413 5413 -3 - 2001 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229924.peg.617 CDS AZTV01000165.1 61 1116 1 + 1056 Rod shape-determining protein MreB Bacterial Cell Division
fig|6666666.229924.peg.618 CDS AZTV01000165.1 1186 2259 1 + 1074 Rod shape-determining protein MreC Bacterial Cell Division;
CBSS-354.1.peg.2917
fig|6666666.229924.peg.619 CDS AZTV01000165.1 2259 2747 3 + 489 Rod shape-determining protein MreD Bacterial Cell Division;
CBSS-354.1.peg.2917
fig|6666666.229924.peg.620 CDS AZTV01000166.1 3 1196 3 + 1194 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229924.peg.621 CDS AZTV01000166.1 2556 1321 -3 - 1236 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229924.peg.622 CDS AZTV01000166.1 2636 2776 2 + 141 hypothetical protein - none -
fig|6666666.229924.peg.623 CDS AZTV01000166.1 3015 2785 -3 - 231 Acyl carrier protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.624 CDS AZTV01000166.1 4016 3288 -2 - 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) - none -
fig|6666666.229924.peg.625 CDS AZTV01000166.1 4667 4041 -2 - 627 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) - none -
fig|6666666.229924.peg.626 CDS AZTV01000167.1 1086 136 -3 - 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229924.peg.627 CDS AZTV01000167.1 2038 1127 -1 - 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229924.peg.628 CDS AZTV01000167.1 2661 2035 -3 - 627 Outer membrane lipoprotein LolB A Gammaproteobacteria Cluster Relating to Translation;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229924.peg.629 CDS AZTV01000167.1 4000 2723 -1 - 1278 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229924.peg.630 CDS AZTV01000167.1 4611 4000 -3 - 612 SH3 domain protein - none -
fig|6666666.229924.peg.631 CDS AZTV01000167.1 5381 4680 -2 - 702 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229924.peg.632 CDS AZTV01000168.1 44 1336 2 + 1293 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229924.peg.633 CDS AZTV01000168.1 2581 1343 -1 - 1239 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229924.peg.634 CDS AZTV01000168.1 3730 2648 -1 - 1083 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.229924.peg.635 CDS AZTV01000168.1 4336 3731 -1 - 606 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.229924.peg.636 CDS AZTV01000168.1 4936 4379 -1 - 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229924.peg.637 CDS AZTV01000168.1 5690 4968 -2 - 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.229924.peg.638 CDS AZTV01000168.1 7642 5693 -1 - 1950 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229924.peg.639 CDS AZTV01000168.1 7706 8524 2 + 819 Aldose 1-epimerase - none -
fig|6666666.229924.peg.640 CDS AZTV01000169.1 48 1463 3 + 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain - none -
fig|6666666.229924.peg.641 CDS AZTV01000170.1 111 1076 3 + 966 tRNA(Cytosine32)-2-thiocytidine synthetase - none -
fig|6666666.229924.peg.642 CDS AZTV01000170.1 1093 1593 1 + 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229924.peg.643 CDS AZTV01000170.1 1599 2798 3 + 1200 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229924.peg.644 CDS AZTV01000170.1 2795 3175 2 + 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229924.peg.645 CDS AZTV01000170.1 4647 3217 -3 - 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229924.peg.646 CDS AZTV01000171.1 140 280 2 + 141 Mobile element protein - none -
fig|6666666.229924.peg.647 CDS AZTV01000171.1 317 565 2 + 249 Mobile element protein - none -
fig|6666666.229924.peg.648 CDS AZTV01000174.1 83 1474 2 + 1392 Chloride channel protein - none -
fig|6666666.229924.peg.649 CDS AZTV01000174.1 1477 2460 1 + 984 tRNA dihydrouridine synthase A - none -
fig|6666666.229924.peg.650 CDS AZTV01000174.1 3508 2516 -1 - 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229924.peg.651 CDS AZTV01000175.1 173 1249 2 + 1077 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation
fig|6666666.229924.peg.652 CDS AZTV01000175.1 1537 1316 -1 - 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229924.peg.653 CDS AZTV01000175.1 1644 2339 3 + 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229924.peg.654 CDS AZTV01000175.1 2456 3619 2 + 1164 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229924.peg.655 CDS AZTV01000175.1 3684 4763 3 + 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229924.peg.656 CDS AZTV01000176.1 268 137 -1 - 132 hypothetical protein - none -
fig|6666666.229924.peg.657 CDS AZTV01000177.1 9 839 3 + 831 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229924.peg.658 CDS AZTV01000177.1 1012 3186 1 + 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229924.peg.659 CDS AZTV01000177.1 4145 3318 -2 - 828 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229924.peg.660 CDS AZTV01000177.1 4942 4322 -1 - 621 Probable transmembrane protein - none -
fig|6666666.229924.peg.661 CDS AZTV01000178.1 112 291 1 + 180 hypothetical protein - none -
fig|6666666.229924.peg.662 CDS AZTV01000178.1 630 1448 3 + 819 hypothetical protein - none -
fig|6666666.229924.peg.663 CDS AZTV01000178.1 1441 3591 1 + 2151 hypothetical protein - none -
fig|6666666.229924.peg.664 CDS AZTV01000178.1 3594 4604 3 + 1011 hypothetical protein - none -
fig|6666666.229924.peg.665 CDS AZTV01000178.1 4613 4789 2 + 177 hypothetical protein - none -
fig|6666666.229924.peg.666 CDS AZTV01000180.1 16 2241 1 + 2226 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229924.peg.667 CDS AZTV01000180.1 2252 2869 2 + 618 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229924.peg.668 CDS AZTV01000180.1 2871 3710 3 + 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229924.peg.669 CDS AZTV01000180.1 3744 4358 3 + 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229924.peg.670 CDS AZTV01000180.1 4372 4581 1 + 210 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229924.peg.671 CDS AZTV01000180.1 4726 5631 1 + 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229924.peg.672 CDS AZTV01000180.1 5681 5941 2 + 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229924.peg.673 CDS AZTV01000180.1 5981 6289 2 + 309 FIG074102: hypothetical protein - none -
fig|6666666.229924.peg.674 CDS AZTV01000181.1 207 341 3 + 135 hypothetical protein - none -
fig|6666666.229924.peg.675 CDS AZTV01000181.1 374 694 2 + 321 putative cytoplasmic protein - none -
fig|6666666.229924.peg.676 CDS AZTV01000181.1 1636 809 -1 - 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229924.peg.677 CDS AZTV01000181.1 2692 1721 -1 - 972 Cys regulon transcriptional activator CysB LysR-family proteins in Escherichia coli
fig|6666666.229924.peg.678 CDS AZTV01000182.1 35 1579 2 + 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229924.peg.679 CDS AZTV01000183.1 28 645 1 + 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229924.peg.680 CDS AZTV01000183.1 705 1034 3 + 330 Protein yifE - none -
fig|6666666.229924.peg.681 CDS AZTV01000183.1 1104 2201 3 + 1098 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) RNA methylation
fig|6666666.229924.peg.682 CDS AZTV01000183.1 2203 2961 1 + 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229924.peg.683 CDS AZTV01000183.1 3053 3388 2 + 336 hypothetical protein - none -
fig|6666666.229924.peg.684 CDS AZTV01000183.1 3443 4816 2 + 1374 hypothetical protein - none -
fig|6666666.229924.peg.685 CDS AZTV01000184.1 121 942 1 + 822 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases
fig|6666666.229924.peg.686 CDS AZTV01000185.1 263 1195 2 + 933 hypothetical protein - none -
fig|6666666.229924.peg.687 CDS AZTV01000185.1 2126 1332 -2 - 795 FIG001154: CcsA-related protein - none -
fig|6666666.229924.peg.688 CDS AZTV01000185.1 2280 3659 3 + 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP)
fig|6666666.229924.peg.689 CDS AZTV01000185.1 3946 3827 -1 - 120 hypothetical protein - none -
fig|6666666.229924.peg.690 CDS AZTV01000186.1 17 952 2 + 936 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway
fig|6666666.229924.peg.691 CDS AZTV01000187.1 147 2165 3 + 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria
fig|6666666.229924.peg.692 CDS AZTV01000188.1 838 1758 1 + 921 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229924.peg.693 CDS AZTV01000188.1 1809 2309 3 + 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229924.peg.694 CDS AZTV01000190.1 33 830 3 + 798 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229924.peg.695 CDS AZTV01000190.1 799 930 1 + 132 hypothetical protein - none -
fig|6666666.229924.peg.696 CDS AZTV01000190.1 954 2492 3 + 1539 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229924.peg.697 CDS AZTV01000190.1 2514 3404 3 + 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229924.peg.698 CDS AZTV01000190.1 3498 5549 3 + 2052 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229924.peg.699 CDS AZTV01000190.1 5534 5650 2 + 117 hypothetical protein - none -
fig|6666666.229924.peg.700 CDS AZTV01000190.1 6649 5609 -1 - 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Uptake of selenate and selenite
fig|6666666.229924.peg.701 CDS AZTV01000190.1 8663 6633 -2 - 2031 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229924.peg.702 CDS AZTV01000191.1 68 196 2 + 129 hypothetical protein - none -
fig|6666666.229924.peg.703 CDS AZTV01000191.1 234 1241 3 + 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229924.peg.704 CDS AZTV01000191.1 1281 1568 3 + 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229924.peg.705 CDS AZTV01000191.1 1565 2440 2 + 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229924.peg.706 CDS AZTV01000191.1 2455 3957 1 + 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229924.peg.707 CDS AZTV01000192.1 387 662 3 + 276 Mobile element protein - none -
fig|6666666.229924.peg.708 CDS AZTV01000194.1 1137 406 -3 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229924.peg.709 CDS AZTV01000194.1 2367 1153 -3 - 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229924.peg.710 CDS AZTV01000195.1 301 29 -1 - 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229924.peg.711 CDS AZTV01000195.1 527 342 -2 - 186 hypothetical protein - none -
fig|6666666.229924.peg.712 CDS AZTV01000195.1 1909 557 -1 - 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229924.peg.713 CDS AZTV01000195.1 2003 2149 2 + 147 hypothetical protein - none -
fig|6666666.229924.peg.714 CDS AZTV01000195.1 2473 2285 -1 - 189 hypothetical protein - none -
fig|6666666.229924.peg.715 CDS AZTV01000195.1 2586 2789 3 + 204 Mobile element protein - none -
fig|6666666.229924.peg.716 CDS AZTV01000195.1 2796 2930 3 + 135 hypothetical protein - none -
fig|6666666.229924.peg.717 CDS AZTV01000195.1 2955 3155 3 + 201 Mobile element protein - none -
fig|6666666.229924.peg.718 CDS AZTV01000196.1 1161 70 -3 - 1092 Integrase - none -
fig|6666666.229924.peg.719 CDS AZTV01000197.1 125 2377 2 + 2253 DNA internalization-related competence protein ComEC/Rec2 KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229924.peg.720 CDS AZTV01000197.1 2424 4172 3 + 1749 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229924.peg.721 CDS AZTV01000197.1 4191 5165 3 + 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229924.peg.722 CDS AZTV01000197.1 5187 5366 3 + 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229924.peg.723 CDS AZTV01000197.1 5368 6141 1 + 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229924.peg.724 CDS AZTV01000197.1 6270 8099 3 + 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229924.peg.725 CDS AZTV01000197.1 8295 8435 3 + 141 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229924.peg.726 CDS AZTV01000197.1 9577 8486 -1 - 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor - none -
fig|6666666.229924.peg.727 CDS AZTV01000198.1 1395 166 -3 - 1230 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229924.peg.728 CDS AZTV01000198.1 1590 1438 -3 - 153 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229924.peg.729 CDS AZTV01000198.1 1961 1590 -2 - 372 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229924.peg.730 CDS AZTV01000198.1 2863 2204 -1 - 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229924.peg.731 CDS AZTV01000198.1 3273 2980 -3 - 294 COG1872 - none -
fig|6666666.229924.peg.732 CDS AZTV01000198.1 3858 3298 -3 - 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229924.peg.733 CDS AZTV01000198.1 4821 3874 -3 - 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229924.peg.734 CDS AZTV01000198.1 4823 4942 2 + 120 hypothetical protein - none -
fig|6666666.229924.peg.735 CDS AZTV01000198.1 5252 5383 2 + 132 hypothetical protein - none -
fig|6666666.229924.peg.736 CDS AZTV01000199.1 58 489 1 + 432 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229924.peg.737 CDS AZTV01000199.1 502 2223 1 + 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229924.peg.738 CDS AZTV01000199.1 2256 2903 3 + 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229924.peg.739 CDS AZTV01000199.1 2920 3612 1 + 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229924.peg.740 CDS AZTV01000200.1 68 1444 2 + 1377 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229924.peg.741 CDS AZTV01000200.1 1606 2820 1 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229924.peg.742 CDS AZTV01000201.1 980 702 -2 - 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229924.peg.743 CDS AZTV01000201.1 2217 958 -3 - 1260 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229924.peg.744 CDS AZTV01000201.1 2315 3082 2 + 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation
fig|6666666.229924.peg.745 CDS AZTV01000201.1 3112 3453 1 + 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229924.peg.746 CDS AZTV01000202.1 636 142 -3 - 495 Protein yfbU - none -
fig|6666666.229924.peg.747 CDS AZTV01000202.1 1397 654 -2 - 744 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229924.peg.748 CDS AZTV01000202.1 3079 1496 -1 - 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229924.peg.749 CDS AZTV01000202.1 4476 3145 -3 - 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229924.peg.750 CDS AZTV01000202.1 5024 4497 -2 - 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229924.peg.751 CDS AZTV01000202.1 5239 5946 1 + 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) - none -
fig|6666666.229924.peg.752 CDS AZTV01000202.1 6645 6328 -3 - 318 hypothetical protein - none -
fig|6666666.229924.peg.753 CDS AZTV01000202.1 8166 6922 -3 - 1245 Tryptophan-specific transport protein - none -
fig|6666666.229924.peg.754 CDS AZTV01000203.1 97 1920 1 + 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
CBSS-83331.1.peg.3039
fig|6666666.229924.peg.755 CDS AZTV01000203.1 1938 3404 3 + 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) - none -
fig|6666666.229924.peg.756 CDS AZTV01000204.1 189 410 3 + 222 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229924.peg.757 CDS AZTV01000204.1 421 1929 1 + 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229924.peg.758 CDS AZTV01000204.1 1926 2891 3 + 966 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229924.peg.759 CDS AZTV01000204.1 2913 3785 3 + 873 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229924.peg.760 CDS AZTV01000204.1 3867 4799 3 + 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229924.peg.761 CDS AZTV01000204.1 5107 4898 -1 - 210 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.229924.peg.762 CDS AZTV01000205.1 2039 195 -2 - 1845 ABC transporter ATP-binding protein - none -
fig|6666666.229924.peg.763 CDS AZTV01000206.1 52 1932 1 + 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229924.peg.764 CDS AZTV01000207.1 39 2813 3 + 2775 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229924.peg.765 CDS AZTV01000208.1 826 20 -1 - 807 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229924.peg.766 CDS AZTV01000208.1 841 957 1 + 117 hypothetical protein - none -
fig|6666666.229924.peg.767 CDS AZTV01000208.1 1038 1697 3 + 660 putative membrane protein - none -
fig|6666666.229924.peg.768 CDS AZTV01000208.1 1827 2399 3 + 573 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.229924.peg.769 CDS AZTV01000209.1 79 2349 1 + 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229924.peg.770 CDS AZTV01000211.1 80 661 2 + 582 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.229924.peg.771 CDS AZTV01000212.1 699 85 -3 - 615 serine/threonine protein kinase - none -
fig|6666666.229924.peg.772 CDS AZTV01000213.1 168 872 3 + 705 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229924.peg.773 CDS AZTV01000213.1 2347 956 -1 - 1392 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis
fig|6666666.229924.peg.774 CDS AZTV01000214.1 215 391 2 + 177 hypothetical protein - none -
fig|6666666.229924.peg.775 CDS AZTV01000214.1 458 1069 2 + 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229924.peg.776 CDS AZTV01000214.1 1093 2460 1 + 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229924.peg.777 CDS AZTV01000214.1 2682 3431 3 + 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229924.peg.778 CDS AZTV01000214.1 3952 3545 -1 - 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229924.peg.779 CDS AZTV01000214.1 4090 5214 1 + 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229924.peg.780 CDS AZTV01000214.1 5227 6057 1 + 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229924.peg.781 CDS AZTV01000215.1 1182 91 -3 - 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229924.peg.782 CDS AZTV01000216.1 83 823 2 + 741 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229924.peg.783 CDS AZTV01000216.1 2087 879 -2 - 1209 Sodium/glutamate symport protein - none -
fig|6666666.229924.peg.784 CDS AZTV01000216.1 2687 2253 -2 - 435 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229924.peg.785 CDS AZTV01000216.1 3514 2684 -1 - 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229924.peg.786 CDS AZTV01000216.1 3984 3511 -3 - 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229924.peg.787 CDS AZTV01000216.1 4655 3987 -2 - 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229924.peg.788 CDS AZTV01000217.1 607 350 -1 - 258 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA processing
fig|6666666.229924.peg.789 CDS AZTV01000219.1 32 2788 2 + 2757 helicase (Snf2/Rad54 family) - none -
fig|6666666.229924.peg.790 CDS AZTV01000220.1 3173 291 -2 - 2883 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229924.peg.791 CDS AZTV01000221.1 305 30 -2 - 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229924.peg.792 CDS AZTV01000221.1 496 335 -1 - 162 Hydrogenase-2 operon protein hybE - none -
fig|6666666.229924.peg.793 CDS AZTV01000223.1 69 491 3 + 423 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229924.peg.794 CDS AZTV01000223.1 507 1019 3 + 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229924.peg.795 CDS AZTV01000223.1 1097 2110 2 + 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.796 CDS AZTV01000224.1 236 364 2 + 129 hypothetical protein - none -
fig|6666666.229924.peg.797 CDS AZTV01000224.1 1558 1106 -1 - 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229924.peg.798 CDS AZTV01000224.1 2736 1675 -3 - 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229924.peg.799 CDS AZTV01000224.1 3661 2756 -1 - 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229924.peg.800 CDS AZTV01000225.1 791 177 -2 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD
fig|6666666.229924.peg.801 CDS AZTV01000225.1 818 2215 2 + 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229924.peg.802 CDS AZTV01000228.1 101 412 2 + 312 SSU ribosomal protein S10p (S20e) - none -
fig|6666666.229924.peg.803 CDS AZTV01000228.1 429 1055 3 + 627 LSU ribosomal protein L3p (L3e) - none -
fig|6666666.229924.peg.804 CDS AZTV01000228.1 1071 1673 3 + 603 LSU ribosomal protein L4p (L1e) - none -
fig|6666666.229924.peg.805 CDS AZTV01000228.1 1670 1972 2 + 303 LSU ribosomal protein L23p (L23Ae) - none -
fig|6666666.229924.peg.806 CDS AZTV01000228.1 1993 2814 1 + 822 LSU ribosomal protein L2p (L8e) - none -
fig|6666666.229924.peg.807 CDS AZTV01000228.1 2840 3115 2 + 276 SSU ribosomal protein S19p (S15e) - none -
fig|6666666.229924.peg.808 CDS AZTV01000228.1 3126 3458 3 + 333 LSU ribosomal protein L22p (L17e) - none -
fig|6666666.229924.peg.809 CDS AZTV01000228.1 3475 4182 1 + 708 SSU ribosomal protein S3p (S3e) - none -
fig|6666666.229924.peg.810 CDS AZTV01000228.1 4196 4606 2 + 411 LSU ribosomal protein L16p (L10e) - none -
fig|6666666.229924.peg.811 CDS AZTV01000228.1 4606 4797 1 + 192 LSU ribosomal protein L29p (L35e) - none -
fig|6666666.229924.peg.812 CDS AZTV01000229.1 1574 60 -2 - 1515 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229924.peg.813 CDS AZTV01000229.1 2189 1587 -2 - 603 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229924.peg.814 CDS AZTV01000229.1 2651 2277 -2 - 375 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229924.peg.815 CDS AZTV01000230.1 6 707 3 + 702 hypothetical protein - none -
fig|6666666.229924.peg.816 CDS AZTV01000230.1 709 1464 1 + 756 hypothetical protein - none -
fig|6666666.229924.peg.817 CDS AZTV01000231.1 39 956 3 + 918 transcriptional regulator MtrA - none -
fig|6666666.229924.peg.818 CDS AZTV01000231.1 1044 2888 3 + 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229924.peg.819 CDS AZTV01000231.1 5367 2929 -3 - 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.820 CDS AZTV01000232.1 3 1070 3 + 1068 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229924.peg.821 CDS AZTV01000233.1 403 519 1 + 117 hypothetical protein - none -
fig|6666666.229924.peg.822 CDS AZTV01000233.1 588 1898 3 + 1311 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.229924.peg.823 CDS AZTV01000233.1 2414 1995 -2 - 420 Putative Holliday junction resolvase YggF Cluster containing Glutathione synthetase
fig|6666666.229924.peg.824 CDS AZTV01000233.1 2971 2414 -1 - 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229924.peg.825 CDS AZTV01000233.1 3723 2989 -3 - 735 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229924.peg.826 CDS AZTV01000235.1 2198 750 -2 - 1449 Peptide transport periplasmic protein SapA - none -
fig|6666666.229924.peg.827 CDS AZTV01000236.1 44 712 2 + 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229924.peg.828 CDS AZTV01000236.1 734 1513 2 + 780 UPF0246 protein YaaA - none -
fig|6666666.229924.peg.829 CDS AZTV01000236.1 1515 2081 3 + 567 FIG00696199: hypothetical protein - none -
fig|6666666.229924.peg.830 CDS AZTV01000236.1 2081 3001 2 + 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229924.peg.831 CDS AZTV01000237.1 267 2522 3 + 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229924.peg.832 CDS AZTV01000238.1 253 41 -1 - 213 hypothetical protein - none -
fig|6666666.229924.peg.833 CDS AZTV01000239.1 171 434 3 + 264 Phage tail fibers Phage tail fiber proteins
fig|6666666.229924.peg.834 CDS AZTV01000240.1 1480 110 -1 - 1371 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229924.peg.835 CDS AZTV01000241.1 18 317 3 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) - none -
fig|6666666.229924.peg.836 CDS AZTV01000241.1 348 2198 3 + 1851 Protein-export membrane protein SecD (TC 3.A.5.1.1) - none -
fig|6666666.229924.peg.837 CDS AZTV01000241.1 2215 3180 1 + 966 Protein-export membrane protein SecF (TC 3.A.5.1.1) - none -
fig|6666666.229924.peg.838 CDS AZTV01000242.1 470 51 -2 - 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229924.peg.839 CDS AZTV01000242.1 1367 510 -2 - 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229924.peg.840 CDS AZTV01000242.1 2246 1479 -2 - 768 Triosephosphate isomerase (EC 5.3.1.1) Glycolysis and Gluconeogenesis
fig|6666666.229924.peg.841 CDS AZTV01000243.1 751 161 -1 - 591 FIG01200173: hypothetical protein - none -
fig|6666666.229924.peg.842 CDS AZTV01000243.1 1833 769 -3 - 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229924.peg.843 CDS AZTV01000243.1 2721 2002 -3 - 720 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229924.peg.844 CDS AZTV01000244.1 699 172 -3 - 528 probable integral membrane protein NMA1777 - none -
fig|6666666.229924.peg.845 CDS AZTV01000244.1 1052 750 -2 - 303 probable integral membrane protein NMA1777 - none -
fig|6666666.229924.peg.846 CDS AZTV01000244.1 1495 1052 -1 - 444 Transcriptional regulator, MarR family - none -
fig|6666666.229924.peg.847 CDS AZTV01000245.1 539 78 -2 - 462 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) Hydrogenases
fig|6666666.229924.peg.848 CDS AZTV01000245.1 933 529 -3 - 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229924.peg.849 CDS AZTV01000245.1 1791 1015 -3 - 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229924.peg.850 CDS AZTV01000245.1 2435 1788 -2 - 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229924.peg.851 CDS AZTV01000245.1 4179 2449 -3 - 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229924.peg.852 CDS AZTV01000245.1 5737 4199 -1 - 1539 Hydrogenase-4 component F - none -
fig|6666666.229924.peg.853 CDS AZTV01000245.1 6380 5742 -2 - 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229924.peg.854 CDS AZTV01000245.1 7836 6391 -3 - 1446 Na(+) H(+) antiporter subunit A - none -
fig|6666666.229924.peg.855 CDS AZTV01000245.1 8814 7849 -3 - 966 Hydrogenase-4 component C (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229924.peg.856 CDS AZTV01000245.1 10591 8822 -1 - 1770 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229924.peg.857 CDS AZTV01000245.1 11236 10877 -1 - 360 Hydrogenase-4 component A (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229924.peg.858 CDS AZTV01000246.1 11 283 2 + 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229924.peg.859 CDS AZTV01000246.1 409 1206 1 + 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229924.peg.860 CDS AZTV01000246.1 1260 3092 3 + 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229924.peg.861 CDS AZTV01000246.1 4308 3244 -3 - 1065 FIG01220323: hypothetical protein - none -
fig|6666666.229924.peg.862 CDS AZTV01000246.1 4408 5298 1 + 891 Transcriptional regulator, LysR family - none -
fig|6666666.229924.peg.863 CDS AZTV01000246.1 6546 5437 -3 - 1110 Putative exported protein precursor - none -
fig|6666666.229924.peg.864 CDS AZTV01000246.1 8224 6683 -1 - 1542 Carboxylesterase type B - none -
fig|6666666.229924.peg.865 CDS AZTV01000248.1 1489 26 -1 - 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229924.peg.866 CDS AZTV01000248.1 1723 1508 -1 - 216 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229924.peg.867 CDS AZTV01000249.1 858 76 -3 - 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229924.peg.868 CDS AZTV01000249.1 1845 862 -3 - 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229924.peg.869 CDS AZTV01000249.1 2474 1842 -2 - 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229924.peg.870 CDS AZTV01000249.1 3444 2476 -3 - 969 FIG004453: protein YceG like - none -
fig|6666666.229924.peg.871 CDS AZTV01000250.1 4053 4 -3 - 4050 HrpA-like helicases - none -
fig|6666666.229924.peg.872 CDS AZTV01000252.1 99 596 3 + 498 FIG00697418: hypothetical protein - none -
fig|6666666.229924.peg.873 CDS AZTV01000253.1 254 99 -2 - 156 hypothetical protein - none -
fig|6666666.229924.peg.874 CDS AZTV01000253.1 256 585 1 + 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229924.peg.875 CDS AZTV01000253.1 698 1291 2 + 594 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229924.peg.876 CDS AZTV01000253.1 1330 1653 1 + 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229924.peg.877 CDS AZTV01000253.1 1653 2822 3 + 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis
fig|6666666.229924.peg.878 CDS AZTV01000253.1 2921 3577 2 + 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229924.peg.879 CDS AZTV01000253.1 3597 4829 3 + 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229924.peg.880 CDS AZTV01000254.1 48 1580 3 + 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229924.peg.881 CDS AZTV01000254.1 2445 1687 -3 - 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229924.peg.882 CDS AZTV01000254.1 3380 2457 -2 - 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229924.peg.883 CDS AZTV01000254.1 4353 3388 -3 - 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229924.peg.884 CDS AZTV01000254.1 5312 4413 -2 - 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229924.peg.885 CDS AZTV01000254.1 5542 7518 1 + 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229924.peg.886 CDS AZTV01000254.1 8631 7714 -3 - 918 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229924.peg.887 CDS AZTV01000255.1 108 473 3 + 366 hypothetical protein - none -
fig|6666666.229924.peg.888 CDS AZTV01000256.1 49 1509 1 + 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229924.peg.889 CDS AZTV01000257.1 24 2489 3 + 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229924.peg.890 CDS AZTV01000257.1 3213 2608 -3 - 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229924.peg.891 CDS AZTV01000258.1 30 1685 3 + 1656 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229924.peg.892 CDS AZTV01000258.1 2080 2352 1 + 273 Phage integrase - none -
fig|6666666.229924.peg.893 CDS AZTV01000259.1 42 176 3 + 135 hypothetical protein - none -
fig|6666666.229924.peg.894 CDS AZTV01000262.1 20 1099 2 + 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229924.peg.895 CDS AZTV01000262.1 1230 1108 -3 - 123 hypothetical protein - none -
fig|6666666.229924.peg.896 CDS AZTV01000262.1 1245 2651 3 + 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229924.peg.897 CDS AZTV01000262.1 2675 3757 2 + 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229924.peg.898 CDS AZTV01000264.1 777 328 -3 - 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229924.peg.899 CDS AZTV01000264.1 987 2381 3 + 1395 Fumarate hydratase class II (EC 4.2.1.2) - none -
fig|6666666.229924.peg.900 CDS AZTV01000265.1 14 1561 2 + 1548 Dca - none -
fig|6666666.229924.peg.901 CDS AZTV01000265.1 1665 1525 -3 - 141 hypothetical protein - none -
fig|6666666.229924.peg.902 CDS AZTV01000265.1 1805 2386 2 + 582 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229924.peg.903 CDS AZTV01000265.1 2396 3628 2 + 1233 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229924.peg.904 CDS AZTV01000265.1 4014 3691 -3 - 324 FIG074102: hypothetical protein - none -
fig|6666666.229924.peg.905 CDS AZTV01000265.1 4183 4007 -1 - 177 Phage-related protein - none -
fig|6666666.229924.peg.906 CDS AZTV01000265.1 5318 4473 -2 - 846 membrane protein, putative - none -
fig|6666666.229924.peg.907 CDS AZTV01000266.1 633 1 -3 - 633 Possible exported protein - none -
fig|6666666.229924.peg.908 CDS AZTV01000266.1 1016 645 -2 - 372 FIG00696467: hypothetical protein - none -
fig|6666666.229924.peg.909 CDS AZTV01000266.1 1442 1035 -2 - 408 FIG00696269: hypothetical protein - none -
fig|6666666.229924.peg.910 CDS AZTV01000266.1 1635 1459 -3 - 177 hypothetical protein - none -
fig|6666666.229924.peg.911 CDS AZTV01000266.1 2021 1698 -2 - 324 FIG00696053: hypothetical protein - none -
fig|6666666.229924.peg.912 CDS AZTV01000267.1 52 282 1 + 231 hypothetical protein - none -
fig|6666666.229924.peg.913 CDS AZTV01000267.1 287 421 2 + 135 hypothetical protein - none -
fig|6666666.229924.peg.914 CDS AZTV01000268.1 13 1095 1 + 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229924.peg.915 CDS AZTV01000268.1 1107 2267 3 + 1161 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229924.peg.916 CDS AZTV01000268.1 2278 3609 1 + 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229924.peg.917 CDS AZTV01000268.1 4164 3697 -3 - 468 Ribonuclease HI (EC 3.1.26.4) Ribonuclease H
fig|6666666.229924.peg.918 CDS AZTV01000269.1 752 243 -2 - 510 probable lipoprotein NlpC - none -
fig|6666666.229924.peg.919 CDS AZTV01000270.1 1411 113 -1 - 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229924.peg.920 CDS AZTV01000270.1 2468 1575 -2 - 894 Tyrosine recombinase XerD - none -
fig|6666666.229924.peg.921 CDS AZTV01000270.1 2911 2471 -1 - 441 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229924.peg.922 CDS AZTV01000270.1 2974 3885 1 + 912 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229924.peg.923 CDS AZTV01000270.1 4350 3976 -3 - 375 opacity associated protein - none -
fig|6666666.229924.peg.924 CDS AZTV01000271.1 388 2298 1 + 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229924.peg.925 CDS AZTV01000271.1 2291 2821 2 + 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229924.peg.926 CDS AZTV01000271.1 2818 3867 1 + 1050 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229924.peg.927 CDS AZTV01000271.1 3864 5060 3 + 1197 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229924.peg.928 CDS AZTV01000271.1 5793 5218 -3 - 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229924.peg.929 CDS AZTV01000273.1 562 41 -1 - 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229924.peg.930 CDS AZTV01000273.1 627 1658 3 + 1032 Lysyl-lysine 2,3-aminomutase Translation elongation factor P lysylation
fig|6666666.229924.peg.931 CDS AZTV01000273.1 1830 3152 3 + 1323 Cell envelope opacity-associated protein A - none -
fig|6666666.229924.peg.932 CDS AZTV01000274.1 5 382 2 + 378 hypothetical protein - none -
fig|6666666.229924.peg.933 CDS AZTV01000276.1 51 1799 3 + 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229924.peg.934 CDS AZTV01000276.1 1816 3450 1 + 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229924.peg.935 CDS AZTV01000276.1 4181 3561 -2 - 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229924.peg.936 CDS AZTV01000276.1 5092 4193 -1 - 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229924.peg.937 CDS AZTV01000277.1 387 79 -3 - 309 Iojap protein - none -
fig|6666666.229924.peg.938 CDS AZTV01000277.1 1710 454 -3 - 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229924.peg.939 CDS AZTV01000278.1 584 21 -2 - 564 CRISPR-associated protein, Csy4 family CRISPRs
fig|6666666.229924.peg.940 CDS AZTV01000278.1 1597 587 -1 - 1011 CRISPR-associated protein, Csy3 family CRISPRs
fig|6666666.229924.peg.941 CDS AZTV01000278.1 2265 1597 -3 - 669 CRISPR-associated protein, Csy2 family CRISPRs
fig|6666666.229924.peg.942 CDS AZTV01000279.1 148 708 1 + 561 Protein of unknown function DUF414 - none -
fig|6666666.229924.peg.943 CDS AZTV01000279.1 721 1155 1 + 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229924.peg.944 CDS AZTV01000279.1 1174 2541 1 + 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229924.peg.945 CDS AZTV01000279.1 3058 2615 -1 - 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229924.peg.946 CDS AZTV01000281.1 88 945 1 + 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229924.peg.947 CDS AZTV01000281.1 977 2323 2 + 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA processing
fig|6666666.229924.peg.948 CDS AZTV01000281.1 3682 2351 -1 - 1332 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229924.peg.949 CDS AZTV01000281.1 4121 3807 -2 - 315 Integral membrane protein - none -
fig|6666666.229924.peg.950 CDS AZTV01000282.1 9 611 3 + 603 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229924.peg.951 CDS AZTV01000282.1 608 1459 2 + 852 Thymidylate synthase (EC 2.1.1.45) pyrimidine conversions
fig|6666666.229924.peg.952 CDS AZTV01000283.1 574 83 -1 - 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster
fig|6666666.229924.peg.953 CDS AZTV01000283.1 915 745 -3 - 171 hypothetical protein - none -
fig|6666666.229924.peg.954 CDS AZTV01000283.1 1619 930 -2 - 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster
fig|6666666.229924.peg.955 CDS AZTV01000283.1 2052 1624 -3 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster
fig|6666666.229924.peg.956 CDS AZTV01000283.1 2759 2208 -2 - 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229924.peg.957 CDS AZTV01000283.1 3171 2761 -3 - 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229924.peg.958 CDS AZTV01000285.1 9 2243 3 + 2235 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229924.peg.959 CDS AZTV01000285.1 2277 3047 3 + 771 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229924.peg.960 CDS AZTV01000285.1 3057 3479 3 + 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229924.peg.961 CDS AZTV01000287.1 1422 46 -3 - 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229924.peg.962 CDS AZTV01000287.1 2801 1446 -2 - 1356 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229924.peg.963 CDS AZTV01000287.1 3757 2801 -1 - 957 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229924.peg.964 CDS AZTV01000287.1 4335 3823 -3 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229924.peg.965 CDS AZTV01000288.1 1511 888 -2 - 624 Hypothetical YciO protein, TsaC/YrdC paralog - none -
fig|6666666.229924.peg.966 CDS AZTV01000288.1 2716 1592 -1 - 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229924.peg.967 CDS AZTV01000288.1 4301 2757 -2 - 1545 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229924.peg.968 CDS AZTV01000289.1 47 586 2 + 540 hypothetical protein - none -
fig|6666666.229924.peg.969 CDS AZTV01000289.1 677 1768 2 + 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) - none -
fig|6666666.229924.peg.970 CDS AZTV01000289.1 2948 1812 -2 - 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229924.peg.971 CDS AZTV01000290.1 46 846 1 + 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965
fig|6666666.229924.peg.972 CDS AZTV01000291.1 381 509 3 + 129 hypothetical protein - none -
fig|6666666.229924.peg.973 CDS AZTV01000291.1 493 1191 1 + 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229924.peg.974 CDS AZTV01000291.1 1955 1266 -2 - 690 Ribosyl nicotinamide transporter, PnuC-like - none -
fig|6666666.229924.peg.975 CDS AZTV01000291.1 2336 2995 2 + 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229924.peg.976 CDS AZTV01000292.1 399 560 3 + 162 hypothetical protein - none -
fig|6666666.229924.peg.977 CDS AZTV01000293.1 1753 866 -1 - 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229924.peg.978 CDS AZTV01000293.1 2468 1767 -2 - 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229924.peg.979 CDS AZTV01000294.1 13 783 1 + 771 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229924.peg.980 CDS AZTV01000294.1 792 1982 3 + 1191 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229924.peg.981 CDS AZTV01000295.1 1701 1150 -3 - 552 Type IV pilus biogenesis protein PilF - none -
fig|6666666.229924.peg.982 CDS AZTV01000295.1 2862 1723 -3 - 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229924.peg.983 CDS AZTV01000295.1 2989 3102 1 + 114 hypothetical protein - none -
fig|6666666.229924.peg.984 CDS AZTV01000295.1 3157 4206 1 + 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229924.peg.985 CDS AZTV01000295.1 5672 4308 -2 - 1365 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229924.peg.986 CDS AZTV01000295.1 7006 5765 -1 - 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229924.peg.987 CDS AZTV01000296.1 29 1606 2 + 1578 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229924.peg.988 CDS AZTV01000296.1 1628 2521 2 + 894 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229924.peg.989 CDS AZTV01000297.1 1315 188 -1 - 1128 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229924.peg.991 CDS AZTV01000298.1 2424 202 -3 - 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229924.peg.993 CDS AZTV01000300.1 391 149 -1 - 243 HipA protein Persister Cells
fig|6666666.229924.peg.994 CDS AZTV01000300.1 567 376 -3 - 192 HipA protein Persister Cells
fig|6666666.229924.peg.995 CDS AZTV01000300.1 633 812 3 + 180 hypothetical protein - none -
fig|6666666.229924.peg.996 CDS AZTV01000300.1 1047 766 -3 - 282 HipB protein Persister Cells
fig|6666666.229924.peg.997 CDS AZTV01000302.1 75 1430 3 + 1356 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229924.peg.998 CDS AZTV01000302.1 1683 2381 3 + 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229924.peg.999 CDS AZTV01000303.1 1498 80 -1 - 1419 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229924.peg.1000 CDS AZTV01000303.1 2645 1518 -2 - 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229924.peg.1001 CDS AZTV01000303.1 5391 2647 -3 - 2745 ABC-type multidrug transport system, permease component - none -
fig|6666666.229924.peg.1002 CDS AZTV01000303.1 6374 5394 -2 - 981 HlyD family secretion protein - none -
fig|6666666.229924.peg.1003 CDS AZTV01000304.1 138 1562 3 + 1425 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA processing
fig|6666666.229924.peg.1004 CDS AZTV01000304.1 2186 1620 -2 - 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229924.peg.1005 CDS AZTV01000304.1 3422 2250 -2 - 1173 Histidine permease YuiF - none -
fig|6666666.229924.peg.1006 CDS AZTV01000305.1 99 503 3 + 405 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229924.peg.1007 CDS AZTV01000305.1 579 1352 3 + 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229924.peg.1008 CDS AZTV01000305.1 2198 1440 -2 - 759 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229924.peg.1009 CDS AZTV01000306.1 170 1651 2 + 1482 ABC transporter ATP-binding protein - none -
fig|6666666.229924.peg.1010 CDS AZTV01000307.1 89 1654 2 + 1566 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase
fig|6666666.229924.peg.1011 CDS AZTV01000307.1 1659 2429 3 + 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase
fig|6666666.229924.peg.1012 CDS AZTV01000307.1 2441 2833 2 + 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229924.peg.1013 CDS AZTV01000307.1 2843 3187 2 + 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229924.peg.1014 CDS AZTV01000307.1 5422 3284 -1 - 2139 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229924.peg.1015 CDS AZTV01000308.1 1265 33 -2 - 1233 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) - none -
fig|6666666.229924.peg.1016 CDS AZTV01000309.1 572 114 -2 - 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229924.peg.1017 CDS AZTV01000309.1 2434 836 -1 - 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229924.peg.1018 CDS AZTV01000310.1 48 755 3 + 708 Aerobic respiration control protein arcA - none -
fig|6666666.229924.peg.1019 CDS AZTV01000310.1 1861 863 -1 - 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229924.peg.1020 CDS AZTV01000310.1 2841 1858 -3 - 984 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229924.peg.1021 CDS AZTV01000310.1 3789 2851 -3 - 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229924.peg.1022 CDS AZTV01000310.1 3945 3799 -3 - 147 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229924.peg.1023 CDS AZTV01000310.1 4081 3914 -1 - 168 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229924.peg.1024 CDS AZTV01000310.1 4440 4057 -3 - 384 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229924.peg.1025 CDS AZTV01000311.1 1371 61 -3 - 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229924.peg.1026 CDS AZTV01000311.1 3407 1398 -2 - 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229924.peg.1027 CDS AZTV01000311.1 5599 3404 -1 - 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229924.peg.1028 CDS AZTV01000311.1 6156 5587 -3 - 570 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229924.peg.1029 CDS AZTV01000312.1 2077 131 -1 - 1947 Translation elongation factor G Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.229924.peg.1030 CDS AZTV01000313.1 66 971 3 + 906 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like - none -
fig|6666666.229924.peg.1031 CDS AZTV01000314.1 137 1456 2 + 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229924.peg.1032 CDS AZTV01000314.1 1506 2867 3 + 1362 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229924.peg.1033 CDS AZTV01000314.1 3636 3833 3 + 198 hypothetical protein - none -
fig|6666666.229924.peg.1034 CDS AZTV01000315.1 1105 470 -1 - 636 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229924.peg.1035 CDS AZTV01000316.1 347 1090 2 + 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.1036 CDS AZTV01000316.1 1075 1863 1 + 789 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.1037 CDS AZTV01000316.1 1841 2104 2 + 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.1038 CDS AZTV01000316.1 2107 2358 1 + 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.1039 CDS AZTV01000316.1 2358 4025 3 + 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.1040 CDS AZTV01000316.1 4051 4596 1 + 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229924.peg.1041 CDS AZTV01000317.1 248 460 2 + 213 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily - none -
fig|6666666.229924.peg.1042 CDS AZTV01000318.1 261 67 -3 - 195 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229924.peg.1043 CDS AZTV01000318.1 504 373 -3 - 132 hypothetical protein - none -
fig|6666666.229924.peg.1044 CDS AZTV01000318.1 546 1238 3 + 693 Permeases of the major facilitator superfamily - none -
fig|6666666.229924.peg.1045 CDS AZTV01000318.1 1196 2002 2 + 807 Permeases of the major facilitator superfamily - none -
fig|6666666.229924.peg.1046 CDS AZTV01000318.1 3201 2029 -3 - 1173 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229924.peg.1047 CDS AZTV01000318.1 3190 3312 1 + 123 hypothetical protein - none -
fig|6666666.229924.peg.1048 CDS AZTV01000318.1 3933 3316 -3 - 618 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229924.peg.1049 CDS AZTV01000319.1 6 2705 3 + 2700 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229924.peg.1050 CDS AZTV01000319.1 2782 3186 1 + 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229924.peg.1051 CDS AZTV01000320.1 151 693 1 + 543 Colicin V production protein - none -
fig|6666666.229924.peg.1052 CDS AZTV01000320.1 815 690 -2 - 126 hypothetical protein - none -
fig|6666666.229924.peg.1053 CDS AZTV01000320.1 2912 837 -2 - 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229924.peg.1054 CDS AZTV01000320.1 5405 3015 -2 - 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229924.peg.1055 CDS AZTV01000322.1 80 661 2 + 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229924.peg.1056 CDS AZTV01000322.1 1847 735 -2 - 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229924.peg.1057 CDS AZTV01000322.1 2843 2031 -2 - 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229924.peg.1058 CDS AZTV01000323.1 1351 482 -1 - 870 Putative ABC transporter of substrate X, permease subunit I - none -
fig|6666666.229924.peg.1059 CDS AZTV01000323.1 2418 1348 -3 - 1071 Putative ABC transporter of substrate X, ATP-binding subunit - none -
fig|6666666.229924.peg.1060 CDS AZTV01000323.1 3725 2646 -2 - 1080 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism
fig|6666666.229924.peg.1061 CDS AZTV01000324.1 125 1279 2 + 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229924.peg.1062 CDS AZTV01000324.1 1282 2655 1 + 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229924.peg.1063 CDS AZTV01000325.1 2173 1019 -1 - 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229924.peg.1064 CDS AZTV01000325.1 3284 2241 -2 - 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229924.peg.1065 CDS AZTV01000327.1 63 1016 3 + 954 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229924.peg.1066 CDS AZTV01000328.1 988 56 -1 - 933 Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis
fig|6666666.229924.peg.1067 CDS AZTV01000328.1 1130 2596 2 + 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain Purine conversions;
Purine salvage cluster
fig|6666666.229924.peg.1068 CDS AZTV01000329.1 767 123 -2 - 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229924.peg.1069 CDS AZTV01000329.1 2189 900 -2 - 1290 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229924.peg.1070 CDS AZTV01000329.1 2537 2196 -2 - 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229924.peg.1071 CDS AZTV01000329.1 3559 2543 -1 - 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229924.peg.1072 CDS AZTV01000330.1 870 133 -3 - 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229924.peg.1073 CDS AZTV01000330.1 3272 867 -2 - 2406 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229924.peg.1074 CDS AZTV01000332.1 385 26 -1 - 360 Glycerol-3-phosphate transporter - none -
fig|6666666.229924.peg.1075 CDS AZTV01000333.1 79 702 1 + 624 hypothetical protein - none -
fig|6666666.229924.peg.1076 CDS AZTV01000333.1 665 1192 2 + 528 hypothetical protein - none -
fig|6666666.229924.peg.1077 CDS AZTV01000333.1 1366 1569 1 + 204 hypothetical protein - none -
fig|6666666.229924.peg.1078 CDS AZTV01000334.1 83 1768 2 + 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229924.peg.1079 CDS AZTV01000334.1 1899 2888 3 + 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229924.peg.1080 CDS AZTV01000335.1 50 1066 2 + 1017 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) - none -
fig|6666666.229924.peg.1081 CDS AZTV01000335.1 1093 2397 1 + 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) - none -
fig|6666666.229924.peg.1082 CDS AZTV01000335.1 2412 3602 3 + 1191 Cell division protein FtsW Bacterial Cell Division;
cell division cluster containing FtsQ
fig|6666666.229924.peg.1083 CDS AZTV01000336.1 2262 973 -3 - 1290 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.229924.peg.1084 CDS AZTV01000337.1 1101 187 -3 - 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229924.peg.1085 CDS AZTV01000338.1 30 770 3 + 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229924.peg.1086 CDS AZTV01000338.1 782 1192 2 + 411 excinuclease ABC subunit A - none -
fig|6666666.229924.peg.1087 CDS AZTV01000338.1 1248 1820 3 + 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229924.peg.1088 CDS AZTV01000339.1 319 26 -1 - 294 UPF0125 protein yfjF - none -
fig|6666666.229924.peg.1089 CDS AZTV01000339.1 692 312 -2 - 381 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229924.peg.1090 CDS AZTV01000339.1 813 1229 3 + 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229924.peg.1091 CDS AZTV01000340.1 59 649 2 + 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229924.peg.1092 CDS AZTV01000341.1 59 1258 2 + 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229924.peg.1093 CDS AZTV01000341.1 1327 1782 1 + 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229924.peg.1094 CDS AZTV01000341.1 1782 2381 3 + 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229924.peg.1095 CDS AZTV01000342.1 1514 279 -2 - 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229924.peg.1096 CDS AZTV01000342.1 2041 1523 -1 - 519 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229924.peg.1097 CDS AZTV01000344.1 5147 657 -2 - 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229924.peg.1098 CDS AZTV01000344.1 5887 5147 -1 - 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229924.peg.1099 CDS AZTV01000344.1 9270 5908 -3 - 3363 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229924.peg.1100 CDS AZTV01000345.1 1509 52 -3 - 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.1101 CDS AZTV01000346.1 20 709 2 + 690 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229924.peg.1102 CDS AZTV01000347.1 219 2072 3 + 1854 GTP-binding protein TypA/BipA - none -
fig|6666666.229924.peg.1103 CDS AZTV01000348.1 39 1025 3 + 987 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases
fig|6666666.229924.peg.1104 CDS AZTV01000348.1 1098 1397 3 + 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism
fig|6666666.229924.peg.1105 CDS AZTV01000350.1 931 77 -1 - 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229924.peg.1106 CDS AZTV01000350.1 2022 934 -3 - 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229924.peg.1107 CDS AZTV01000350.1 2537 2046 -2 - 492 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229924.peg.1108 CDS AZTV01000351.1 91 1080 1 + 990 Octaprenyl diphosphate synthase (EC 2.5.1.90) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229924.peg.1109 CDS AZTV01000351.1 1082 1813 2 + 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229924.peg.1110 CDS AZTV01000351.1 1978 1829 -1 - 150 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) CBSS-87626.3.peg.3639;
Ubiquinone Biosynthesis
fig|6666666.229924.peg.1111 CDS AZTV01000352.1 2383 518 -1 - 1866 Ferrichrome-iron receptor - none -
fig|6666666.229924.peg.1112 CDS AZTV01000353.1 17 1942 2 + 1926 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229924.peg.1113 CDS AZTV01000354.1 935 435 -2 - 501 SSU ribosomal protein S5p (S2e) - none -
fig|6666666.229924.peg.1114 CDS AZTV01000354.1 1304 951 -2 - 354 LSU ribosomal protein L18p (L5e) - none -
fig|6666666.229924.peg.1115 CDS AZTV01000354.1 1629 1318 -3 - 312 LSU ribosomal protein L6p (L9e) - none -
fig|6666666.229924.peg.1116 CDS AZTV01000354.1 2259 1867 -3 - 393 SSU ribosomal protein S8p (S15Ae) - none -
fig|6666666.229924.peg.1117 CDS AZTV01000354.1 2601 2296 -3 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent - none -
fig|6666666.229924.peg.1118 CDS AZTV01000354.1 3042 2614 -3 - 429 LSU ribosomal protein L5p (L11e) - none -
fig|6666666.229924.peg.1119 CDS AZTV01000355.1 283 468 1 + 186 hypothetical protein - none -
fig|6666666.229924.peg.1120 CDS AZTV01000355.1 513 632 3 + 120 hypothetical protein - none -
fig|6666666.229924.peg.1121 CDS AZTV01000355.1 800 663 -2 - 138 hypothetical protein - none -
fig|6666666.229924.peg.1122 CDS AZTV01000355.1 2061 1399 -3 - 663 5-deoxy-glucuronate isomerase (EC 5.3.1.-) - none -
fig|6666666.229924.peg.1123 CDS AZTV01000356.1 943 140 -1 - 804 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229924.peg.1124 CDS AZTV01000358.1 63 1052 3 + 990 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229924.peg.1125 CDS AZTV01000358.1 1004 1555 2 + 552 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229924.peg.1126 CDS AZTV01000358.1 2311 1613 -1 - 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) Glutathione: Non-redox reactions
fig|6666666.229924.peg.1127 CDS AZTV01000358.1 2332 3033 1 + 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229924.peg.1128 CDS AZTV01000359.1 64 2634 1 + 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229924.peg.1129 CDS AZTV01000359.1 2762 2613 -2 - 150 hypothetical protein - none -
fig|6666666.229924.peg.1130 CDS AZTV01000359.1 3235 2735 -1 - 501 hypothetical protein - none -
fig|6666666.229924.peg.1131 CDS AZTV01000359.1 3418 4446 1 + 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229924.peg.1132 CDS AZTV01000359.1 4446 4625 3 + 180 hypothetical protein - none -
fig|6666666.229924.peg.1133 CDS AZTV01000359.1 4704 5528 3 + 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229924.peg.1134 CDS AZTV01000359.1 5538 6428 3 + 891 Tyrosine recombinase XerC - none -
fig|6666666.229924.peg.1135 CDS AZTV01000359.1 6443 7156 2 + 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229924.peg.1136 CDS AZTV01000359.1 7683 7258 -3 - 426 Excinuclease ATPase subunit - none -
fig|6666666.229924.peg.1137 CDS AZTV01000360.1 1674 145 -3 - 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Polyamine Metabolism
fig|6666666.229924.peg.1138 CDS AZTV01000363.1 807 94 -3 - 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965
fig|6666666.229924.peg.1139 CDS AZTV01000363.1 952 839 -1 - 114 hypothetical protein - none -
fig|6666666.229924.peg.1140 CDS AZTV01000363.1 1440 964 -3 - 477 Mediator of hyperadherence YidE - none -
fig|6666666.229924.peg.1141 CDS AZTV01000363.1 2300 1431 -2 - 870 Mediator of hyperadherence YidE - none -
fig|6666666.229924.peg.1142 CDS AZTV01000364.1 69 197 3 + 129 hypothetical protein - none -
fig|6666666.229924.peg.1143 CDS AZTV01000364.1 2217 202 -3 - 2016 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229924.peg.1144 CDS AZTV01000365.1 1424 210 -2 - 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229924.peg.1145 CDS AZTV01000366.1 1352 162 -2 - 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229924.peg.1146 CDS AZTV01000367.1 25 639 1 + 615 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229924.peg.1147 CDS AZTV01000367.1 737 2383 2 + 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster
fig|6666666.229924.peg.1148 CDS AZTV01000367.1 2445 2732 3 + 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229924.peg.1149 CDS AZTV01000368.1 10 243 1 + 234 Putative transporting ATPase - none -
fig|6666666.229924.peg.1150 CDS AZTV01000368.1 1427 369 -2 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229924.peg.1151 CDS AZTV01000369.1 1498 1325 -1 - 174 DsrE-related protein - none -
fig|6666666.229924.peg.1152 CDS AZTV01000370.1 955 83 -1 - 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle
fig|6666666.229924.peg.1153 CDS AZTV01000370.1 2135 966 -2 - 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle
fig|6666666.229924.peg.1154 CDS AZTV01000372.1 6 620 3 + 615 Mlr7403 protein CBSS-290633.1.peg.1906
fig|6666666.229924.peg.1155 CDS AZTV01000372.1 673 1125 1 + 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229924.peg.1156 CDS AZTV01000372.1 1835 1131 -2 - 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229924.peg.1157 CDS AZTV01000372.1 1815 1958 3 + 144 hypothetical protein - none -
fig|6666666.229924.peg.1158 CDS AZTV01000372.1 3208 1955 -1 - 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229924.peg.1159 CDS AZTV01000372.1 3958 3332 -1 - 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229924.peg.1160 CDS AZTV01000373.1 83 820 2 + 738 Putative preQ0 transporter - none -
fig|6666666.229924.peg.1161 CDS AZTV01000373.1 2139 889 -3 - 1251 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229924.peg.1162 CDS AZTV01000373.1 3537 2152 -3 - 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229924.peg.1163 CDS AZTV01000374.1 17 1228 2 + 1212 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229924.peg.1164 CDS AZTV01000374.1 1232 1429 2 + 198 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229924.peg.1165 CDS AZTV01000374.1 1398 2360 3 + 963 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229924.peg.1166 CDS AZTV01000375.1 44 1036 2 + 993 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229924.peg.1167 CDS AZTV01000375.1 1091 2035 2 + 945 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229924.peg.1168 CDS AZTV01000376.1 411 1 -3 - 411 probable membrane protein YPO3565 - none -
fig|6666666.229924.peg.1169 CDS AZTV01000376.1 2344 581 -1 - 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229924.peg.1170 CDS AZTV01000376.1 3351 2440 -3 - 912 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229924.peg.1171 CDS AZTV01000377.1 73 318 1 + 246 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229924.peg.1172 CDS AZTV01000377.1 1721 375 -2 - 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) - none -
fig|6666666.229924.peg.1173 CDS AZTV01000377.1 2442 1744 -3 - 699 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) - none -
fig|6666666.229924.peg.1174 CDS AZTV01000378.1 37 555 1 + 519 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229924.peg.1175 CDS AZTV01000378.1 604 1602 1 + 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229924.peg.1176 CDS AZTV01000378.1 1553 1675 2 + 123 hypothetical protein - none -
fig|6666666.229924.peg.1177 CDS AZTV01000378.1 2190 1672 -3 - 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229924.peg.1178 CDS AZTV01000379.1 1008 583 -3 - 426 Queuosine biosynthesis QueD, PTPS-I - none -
fig|6666666.229924.peg.1179 CDS AZTV01000380.1 90 1091 3 + 1002 ABC transporter, solute-binding protein - none -
fig|6666666.229924.peg.1180 CDS AZTV01000380.1 1091 2104 2 + 1014 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229924.peg.1181 CDS AZTV01000380.1 2101 2850 1 + 750 ABC transporter ATP-binding protein - none -
fig|6666666.229924.peg.1182 CDS AZTV01000380.1 2945 3247 2 + 303 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229924.peg.1183 CDS AZTV01000380.1 3244 5340 1 + 2097 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229924.peg.1184 CDS AZTV01000383.1 48 392 3 + 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis
fig|6666666.229924.peg.1185 CDS AZTV01000383.1 529 1662 1 + 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229924.peg.1186 CDS AZTV01000385.1 853 275 -1 - 579 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229924.peg.1187 CDS AZTV01000385.1 821 949 2 + 129 hypothetical protein - none -
fig|6666666.229924.peg.1188 CDS AZTV01000386.1 15 629 3 + 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229924.peg.1189 CDS AZTV01000386.1 644 1657 2 + 1014 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229924.peg.1190 CDS AZTV01000386.1 1983 1711 -3 - 273 Chromosome segregation ATPases - none -
fig|6666666.229924.peg.1191 CDS AZTV01000387.1 2075 825 -2 - 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229924.peg.1192 CDS AZTV01000389.1 1500 67 -3 - 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229924.peg.1193 CDS AZTV01000389.1 2899 1487 -1 - 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229924.peg.1194 CDS AZTV01000390.1 202 29 -1 - 174 hypothetical protein - none -
fig|6666666.229924.peg.1195 CDS AZTV01000390.1 236 1378 2 + 1143 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229924.peg.1196 CDS AZTV01000390.1 1371 2294 3 + 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229924.peg.1197 CDS AZTV01000390.1 3150 2332 -3 - 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229924.peg.1198 CDS AZTV01000392.1 5 670 2 + 666 Cysteine synthase (EC 2.5.1.47) Methionine Biosynthesis
fig|6666666.229924.peg.1199 CDS AZTV01000392.1 748 635 -1 - 114 hypothetical protein - none -
fig|6666666.229924.peg.1200 CDS AZTV01000392.1 1036 890 -1 - 147 hypothetical protein - none -
fig|6666666.229924.peg.1201 CDS AZTV01000392.1 1689 1108 -3 - 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229924.peg.1202 CDS AZTV01000392.1 3116 2025 -2 - 1092 GTP-binding and nucleic acid-binding protein YchF - none -
fig|6666666.229924.peg.1203 CDS AZTV01000392.1 3889 3305 -1 - 585 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster
fig|6666666.229924.peg.1204 CDS AZTV01000392.1 4509 4018 -3 - 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229924.peg.1205 CDS AZTV01000392.1 5464 4520 -1 - 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229924.peg.1206 CDS AZTV01000394.1 73 2904 1 + 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229924.peg.1207 CDS AZTV01000395.1 10 408 1 + 399 Integral membrane protein TerC - none -
fig|6666666.229924.peg.1208 CDS AZTV01000395.1 1716 517 -3 - 1200 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases
fig|6666666.229924.peg.1209 CDS AZTV01000396.1 189 1637 3 + 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917
fig|6666666.229924.peg.1210 CDS AZTV01000398.1 3 2456 3 + 2454 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229924.peg.1211 CDS AZTV01000398.1 3480 2662 -3 - 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229924.peg.1212 CDS AZTV01000399.1 26 2632 2 + 2607 DNA topoisomerase I (EC 5.99.1.2) Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229924.peg.1213 CDS AZTV01000402.1 1289 69 -2 - 1221 Tyrosine-specific transport protein - none -
fig|6666666.229924.peg.1214 CDS AZTV01000403.1 342 455 3 + 114 hypothetical protein - none -
fig|6666666.229924.peg.1215 CDS AZTV01000403.1 794 465 -2 - 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229924.peg.1216 CDS AZTV01000404.1 196 2643 1 + 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229924.peg.1217 CDS AZTV01000404.1 2656 3600 1 + 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229924.peg.1218 CDS AZTV01000404.1 3628 4068 1 + 441 hypothetical protein - none -
fig|6666666.229924.peg.1219 CDS AZTV01000404.1 4124 5398 2 + 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229924.peg.1220 CDS AZTV01000404.1 5457 6176 3 + 720 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) - none -
fig|6666666.229924.peg.1221 CDS AZTV01000405.1 1330 35 -1 - 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229924.peg.1222 CDS AZTV01000405.1 2820 1456 -3 - 1365 lipoprotein, putative - none -
fig|6666666.229924.peg.1223 CDS AZTV01000405.1 2989 2867 -1 - 123 hypothetical protein - none -
fig|6666666.229924.peg.1224 CDS AZTV01000406.1 475 20 -1 - 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229924.peg.1225 CDS AZTV01000406.1 721 476 -1 - 246 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229924.peg.1226 CDS AZTV01000406.1 1161 721 -3 - 441 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229924.peg.1227 CDS AZTV01000406.1 2269 1256 -1 - 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229924.peg.1228 CDS AZTV01000407.1 189 347 3 + 159 hypothetical protein - none -
fig|6666666.229924.peg.1229 CDS AZTV01000407.1 1303 503 -1 - 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229924.peg.1230 CDS AZTV01000408.1 1206 67 -3 - 1140 Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) - none -
fig|6666666.229924.peg.1231 CDS AZTV01000408.1 2490 1297 -3 - 1194 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) - none -
fig|6666666.229924.peg.1232 CDS AZTV01000409.1 2344 59 -1 - 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229924.peg.1233 CDS AZTV01000410.1 1171 596 -1 - 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229924.peg.1234 CDS AZTV01000410.1 3687 1276 -3 - 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229924.peg.1235 CDS AZTV01000411.1 53 1117 2 + 1065 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) - none -
fig|6666666.229924.peg.1236 CDS AZTV01000411.1 1110 1805 3 + 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229924.peg.1237 CDS AZTV01000411.1 2694 1858 -3 - 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229924.peg.1238 CDS AZTV01000411.1 4520 3009 -2 - 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229924.peg.1239 CDS AZTV01000411.1 5659 4655 -1 - 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229924.peg.1240 CDS AZTV01000411.1 6665 5772 -2 - 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229924.peg.1241 CDS AZTV01000412.1 2234 18 -2 - 2217 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229924.peg.1242 CDS AZTV01000413.1 123 1223 3 + 1101 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229924.peg.1243 CDS AZTV01000413.1 3278 1299 -2 - 1980 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229924.peg.1244 CDS AZTV01000415.1 194 1462 2 + 1269 Immunoglobulin A1 protease / autotransporter domain, T5aSS type secretion Autotransporter proteins;
Autotransporter proteins
fig|6666666.229924.peg.1245 CDS AZTV01000415.1 1798 1526 -1 - 273 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229924.peg.1246 CDS AZTV01000416.1 52 1995 1 + 1944 oligopeptide transporter - none -
fig|6666666.229924.peg.1247 CDS AZTV01000416.1 2057 2485 2 + 429 hypothetical protein - none -
fig|6666666.229924.peg.1248 CDS AZTV01000417.1 8 316 2 + 309 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229924.peg.1249 CDS AZTV01000417.1 367 1191 1 + 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229924.peg.1250 CDS AZTV01000418.1 147 275 3 + 129 hypothetical protein - none -
fig|6666666.229924.peg.1251 CDS AZTV01000418.1 478 353 -1 - 126 hypothetical protein - none -
fig|6666666.229924.peg.1252 CDS AZTV01000420.1 3862 1952 -1 - 1911 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229924.peg.1253 CDS AZTV01000421.1 273 22 -3 - 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229924.peg.1254 CDS AZTV01000421.1 1338 382 -3 - 957 Polysaccharide polymerization protein - none -
fig|6666666.229924.peg.1255 CDS AZTV01000423.1 1163 27 -2 - 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229924.peg.1256 CDS AZTV01000423.1 2638 1178 -1 - 1461 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229924.peg.1257 CDS AZTV01000424.1 43 873 1 + 831 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229924.peg.1258 CDS AZTV01000425.1 102 1088 3 + 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229924.peg.1259 CDS AZTV01000425.1 1785 1072 -3 - 714 SanA protein - none -
fig|6666666.229924.peg.1260 CDS AZTV01000426.1 447 1778 3 + 1332 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229924.peg.1261 CDS AZTV01000426.1 1903 2307 1 + 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229924.peg.1262 CDS AZTV01000427.1 2246 462 -2 - 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229924.peg.1263 CDS AZTV01000427.1 2393 2839 2 + 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229924.peg.1264 CDS AZTV01000428.1 976 731 -1 - 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229924.peg.1265 CDS AZTV01000429.1 23 829 2 + 807 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229924.peg.1266 CDS AZTV01000429.1 1335 919 -3 - 417 putative membrane protein - none -
fig|6666666.229924.peg.1267 CDS AZTV01000430.1 1825 38 -1 - 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis
fig|6666666.229924.peg.1268 CDS AZTV01000430.1 2024 5500 2 + 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229924.peg.1269 CDS AZTV01000430.1 5516 5629 2 + 114 hypothetical protein - none -
fig|6666666.229924.peg.1270 CDS AZTV01000431.1 522 196 -3 - 327 Putative lipoprotein yceB precursor - none -
fig|6666666.229924.peg.1271 CDS AZTV01000432.1 1050 202 -3 - 849 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle
fig|6666666.229924.peg.1272 CDS AZTV01000433.1 91 744 1 + 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229924.peg.1273 CDS AZTV01000434.1 79 534 1 + 456 Outer membrane lipoprotein - none -
fig|6666666.229924.peg.1274 CDS AZTV01000434.1 675 1757 3 + 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802
fig|6666666.229924.peg.1275 CDS AZTV01000434.1 1797 2696 3 + 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802
fig|6666666.229924.peg.1276 CDS AZTV01000434.1 2706 3560 3 + 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation
fig|6666666.229924.peg.1277 CDS AZTV01000435.1 1479 97 -3 - 1383 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229924.peg.1278 CDS AZTV01000436.1 9 1907 3 + 1899 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Type IV pilus
fig|6666666.229924.peg.1279 CDS AZTV01000436.1 2002 2847 1 + 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229924.peg.1280 CDS AZTV01000436.1 2942 4312 2 + 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229924.peg.1281 CDS AZTV01000436.1 5089 4445 -1 - 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229924.peg.1282 CDS AZTV01000437.1 1053 34 -3 - 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.1283 CDS AZTV01000437.1 1250 1080 -2 - 171 LSU ribosomal protein L32p - none -
fig|6666666.229924.peg.1284 CDS AZTV01000437.1 1734 1267 -3 - 468 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229924.peg.1285 CDS AZTV01000439.1 1 495 1 + 495 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229924.peg.1286 CDS AZTV01000440.1 41 286 2 + 246 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229924.peg.1287 CDS AZTV01000440.1 255 701 3 + 447 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229924.peg.1288 CDS AZTV01000440.1 670 1098 1 + 429 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229924.peg.1289 CDS AZTV01000440.1 1123 2064 1 + 942 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229924.peg.1290 CDS AZTV01000440.1 3959 2190 -2 - 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229924.peg.1291 CDS AZTV01000441.1 1397 126 -2 - 1272 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229924.peg.1292 CDS AZTV01000443.1 92 340 2 + 249 SSU ribosomal protein S16p - none -
fig|6666666.229924.peg.1293 CDS AZTV01000443.1 366 893 3 + 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229924.peg.1294 CDS AZTV01000443.1 959 1708 2 + 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229924.peg.1295 CDS AZTV01000443.1 1734 2084 3 + 351 LSU ribosomal protein L19p - none -
fig|6666666.229924.peg.1296 CDS AZTV01000444.1 44 766 2 + 723 miscellaneous; hypothetical/partial homology - none -
fig|6666666.229924.peg.1297 CDS AZTV01000445.1 863 6 -2 - 858 Rare lipoprotein A precursor - none -
fig|6666666.229924.peg.1298 CDS AZTV01000445.1 2027 912 -2 - 1116 Rod shape-determining protein RodA - none -
fig|6666666.229924.peg.1299 CDS AZTV01000445.1 3675 2020 -3 - 1656 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039
fig|6666666.229924.peg.1300 CDS AZTV01000446.1 71 748 2 + 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229924.peg.1301 CDS AZTV01000447.1 55 789 1 + 735 Arginine ABC transporter, ATP-binding protein ArtP - none -
fig|6666666.229924.peg.1302 CDS AZTV01000448.1 266 33 -2 - 234 hypothetical protein - none -
fig|6666666.229924.peg.1303 CDS AZTV01000449.1 296 153 -2 - 144 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229924.peg.1304 CDS AZTV01000451.1 737 910 2 + 174 hypothetical protein - none -
fig|6666666.229924.peg.1305 CDS AZTV01000451.1 1859 927 -2 - 933 Permease of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229924.peg.1306 CDS AZTV01000451.1 2187 1930 -3 - 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868
fig|6666666.229924.peg.1307 CDS AZTV01000452.1 108 1490 3 + 1383 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229924.peg.1308 CDS AZTV01000452.1 2178 1558 -3 - 621 Outer membrane protein W precursor - none -
fig|6666666.229924.peg.1309 CDS AZTV01000453.1 72 938 3 + 867 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229924.peg.1310 CDS AZTV01000453.1 2025 1036 -3 - 990 Cytosine deaminase (EC 3.5.4.1) Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229924.peg.1311 CDS AZTV01000454.1 1570 197 -1 - 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Recycling of Peptidoglycan Amino Acids
fig|6666666.229924.peg.1312 CDS AZTV01000455.1 83 1039 2 + 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229924.peg.1313 CDS AZTV01000456.1 176 57 -2 - 120 hypothetical protein - none -
fig|6666666.229924.peg.1314 CDS AZTV01000456.1 1715 1266 -2 - 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229924.peg.1315 CDS AZTV01000456.1 1961 1731 -2 - 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229924.peg.1316 CDS AZTV01000456.1 2300 1974 -2 - 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229924.peg.1317 CDS AZTV01000456.1 2664 2287 -3 - 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229924.peg.1318 CDS AZTV01000456.1 3202 2816 -1 - 387 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229924.peg.1319 CDS AZTV01000457.1 90 1130 3 + 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229924.peg.1320 CDS AZTV01000458.1 135 950 3 + 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229924.peg.1321 CDS AZTV01000458.1 1932 1039 -3 - 894 Transcriptional regulator, LysR family - none -
fig|6666666.229924.peg.1322 CDS AZTV01000458.1 2115 2960 3 + 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229924.peg.1323 CDS AZTV01000458.1 3024 4004 3 + 981 Aldo-keto reductase - none -
fig|6666666.229924.peg.1324 CDS AZTV01000459.1 1964 1095 -2 - 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.1325 CDS AZTV01000459.1 2197 1979 -1 - 219 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229924.peg.1326 CDS AZTV01000462.1 1466 1329 -2 - 138 hypothetical protein - none -
fig|6666666.229924.peg.1327 CDS AZTV01000462.1 1465 1998 1 + 534 FIG138315: Putative alpha helix protein - none -
fig|6666666.229924.peg.1328 CDS AZTV01000462.1 3324 2056 -3 - 1269 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229924.peg.1329 CDS AZTV01000463.1 65 1093 2 + 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.1330 CDS AZTV01000467.1 14 496 2 + 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229924.peg.1331 CDS AZTV01000467.1 2594 615 -2 - 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229924.peg.1332 CDS AZTV01000467.1 3455 2667 -2 - 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) - none -
fig|6666666.229924.peg.1333 CDS AZTV01000468.1 55 549 1 + 495 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229924.peg.1334 CDS AZTV01000468.1 553 1023 1 + 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229924.peg.1335 CDS AZTV01000468.1 1026 1322 3 + 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229924.peg.1336 CDS AZTV01000469.1 105 1115 3 + 1011 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229924.peg.1337 CDS AZTV01000470.1 1786 29 -1 - 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229924.peg.1338 CDS AZTV01000470.1 2123 1908 -2 - 216 SSU ribosomal protein S21p Macromolecular synthesis operon
fig|6666666.229924.peg.1339 CDS AZTV01000471.1 2219 1443 -2 - 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229924.peg.1340 CDS AZTV01000471.1 2854 2222 -1 - 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229924.peg.1341 CDS AZTV01000471.1 4095 2851 -3 - 1245 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) - none -
fig|6666666.229924.peg.1342 CDS AZTV01000471.1 4919 4098 -2 - 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229924.peg.1343 CDS AZTV01000472.1 1487 483 -2 - 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229924.peg.1344 CDS AZTV01000473.1 484 119 -1 - 366 Cell division protein - none -
fig|6666666.229924.peg.1345 CDS AZTV01000474.1 116 1324 2 + 1209 Paraquat-inducible protein A Oxidative stress
fig|6666666.229924.peg.1346 CDS AZTV01000474.1 1287 3944 3 + 2658 Paraquat-inducible protein B Oxidative stress
fig|6666666.229924.peg.1347 CDS AZTV01000474.1 5212 4019 -1 - 1194 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229924.peg.1348 CDS AZTV01000475.1 231 932 3 + 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229924.peg.1349 CDS AZTV01000475.1 937 2130 1 + 1194 Bicyclomycin resistance protein - none -
fig|6666666.229924.peg.1350 CDS AZTV01000476.1 2575 1391 -1 - 1185 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229924.peg.1351 CDS AZTV01000477.1 493 23 -1 - 471 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229924.peg.1352 CDS AZTV01000478.1 1272 190 -3 - 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229924.peg.1353 CDS AZTV01000478.1 2946 1504 -3 - 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229924.peg.1354 CDS AZTV01000479.1 1299 22 -3 - 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.229924.peg.1355 CDS AZTV01000479.1 2424 1321 -3 - 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229924.peg.1356 CDS AZTV01000480.1 1446 73 -3 - 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229924.peg.1357 CDS AZTV01000480.1 2115 1843 -3 - 273 FIG00904058: hypothetical protein - none -
fig|6666666.229924.peg.1358 CDS AZTV01000480.1 2327 2115 -2 - 213 FIG003276: zinc-binding protein - none -
fig|6666666.229924.peg.1359 CDS AZTV01000480.1 2940 2317 -3 - 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229924.peg.1360 CDS AZTV01000481.1 863 108 -2 - 756 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229924.peg.1361 CDS AZTV01000483.1 96 803 3 + 708 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229924.peg.1362 CDS AZTV01000484.1 1148 177 -2 - 972 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229924.peg.1363 CDS AZTV01000484.1 1209 1688 3 + 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229924.peg.1364 CDS AZTV01000484.1 2779 1802 -1 - 978 Ferrichrome-iron receptor - none -
fig|6666666.229924.peg.1365 CDS AZTV01000485.1 85 972 1 + 888 Peptide transport system permease protein SapC - none -
fig|6666666.229924.peg.1366 CDS AZTV01000485.1 980 2032 2 + 1053 Peptide transport system ATP-binding protein SapD - none -
fig|6666666.229924.peg.1367 CDS AZTV01000486.1 1466 99 -2 - 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.1368 CDS AZTV01000488.1 10 204 1 + 195 Endoribonuclease L-PSP - none -
fig|6666666.229924.peg.1369 CDS AZTV01000488.1 2384 273 -2 - 2112 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229924.peg.1370 CDS AZTV01000488.1 3092 2403 -2 - 690 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229924.peg.1371 CDS AZTV01000490.1 35 439 2 + 405 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229924.peg.1372 CDS AZTV01000490.1 1325 444 -2 - 882 Transcriptional regulator, AraC family - none -
fig|6666666.229924.peg.1373 CDS AZTV01000490.1 2021 1395 -2 - 627 membrane protein ykgB - none -
fig|6666666.229924.peg.1374 CDS AZTV01000491.1 56 856 2 + 801 Membrane protein LAPB - none -
fig|6666666.229924.peg.1375 CDS AZTV01000491.1 1428 952 -3 - 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) RNA methylation
fig|6666666.229924.peg.1376 CDS AZTV01000492.1 1441 32 -1 - 1410 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229924.peg.1377 CDS AZTV01000492.1 1854 1462 -3 - 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229924.peg.1378 CDS AZTV01000492.1 2378 1854 -2 - 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229924.peg.1379 CDS AZTV01000492.1 2893 2375 -1 - 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229924.peg.1380 CDS AZTV01000492.1 3713 2904 -2 - 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229924.peg.1381 CDS AZTV01000493.1 1278 19 -3 - 1260 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229924.peg.1382 CDS AZTV01000493.1 1911 1426 -3 - 486 FIG00696143: hypothetical protein - none -
fig|6666666.229924.peg.1383 CDS AZTV01000495.1 687 103 -3 - 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229924.peg.1384 CDS AZTV01000495.1 775 2151 1 + 1377 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP)
fig|6666666.229924.peg.1385 CDS AZTV01000495.1 2190 2840 3 + 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229924.peg.1386 CDS AZTV01000495.1 2849 3784 2 + 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229924.peg.1387 CDS AZTV01000496.1 12 572 3 + 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) DNA Repair Base Excision
fig|6666666.229924.peg.1388 CDS AZTV01000498.1 188 304 2 + 117 hypothetical protein - none -
fig|6666666.229924.peg.1389 CDS AZTV01000498.1 578 393 -2 - 186 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229924.peg.1390 CDS AZTV01000498.1 1327 530 -1 - 798 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229924.peg.1391 CDS AZTV01000499.1 1176 841 -3 - 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229924.peg.1392 CDS AZTV01000499.1 1356 1222 -3 - 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229924.peg.1393 CDS AZTV01000500.1 115 702 1 + 588 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229924.peg.1394 CDS AZTV01000501.1 108 767 3 + 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229924.peg.1395 CDS AZTV01000501.1 780 1196 3 + 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229924.peg.1396 CDS AZTV01000503.1 23 1285 2 + 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.229924.peg.1397 CDS AZTV01000506.1 994 107 -1 - 888 HflC protein Hfl operon
fig|6666666.229924.peg.1398 CDS AZTV01000506.1 2016 994 -3 - 1023 HflK protein Hfl operon
fig|6666666.229924.peg.1399 CDS AZTV01000507.1 826 17 -1 - 810 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229924.peg.1400 CDS AZTV01000509.1 570 31 -3 - 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229924.peg.1401 CDS AZTV01000509.1 2138 594 -2 - 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229924.peg.1402 CDS AZTV01000510.1 492 226 -3 - 267 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229924.peg.1403 CDS AZTV01000511.1 2 799 2 + 798 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229924.peg.1404 CDS AZTV01000512.1 17 457 2 + 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229924.peg.1405 CDS AZTV01000512.1 625 3288 1 + 2664 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229924.peg.1406 CDS AZTV01000512.1 3356 3706 2 + 351 FIG00782386: hypothetical protein - none -
fig|6666666.229924.peg.1407 CDS AZTV01000512.1 4057 3740 -1 - 318 Translation initiation factor SUI1-related protein - none -
fig|6666666.229924.peg.1408 CDS AZTV01000512.1 4755 4063 -3 - 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis
fig|6666666.229924.peg.1409 CDS AZTV01000512.1 5201 4785 -2 - 417 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229924.peg.1410 CDS AZTV01000513.1 2140 821 -1 - 1320 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229924.peg.1411 CDS AZTV01000513.1 2399 2217 -2 - 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229924.peg.1412 CDS AZTV01000514.1 381 1565 3 + 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229924.peg.1413 CDS AZTV01000514.1 1580 2266 2 + 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229924.peg.1414 CDS AZTV01000515.1 510 241 -3 - 270 Probable lipoprotein nlpC precursor - none -
fig|6666666.229924.peg.1415 CDS AZTV01000516.1 53 1900 2 + 1848 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229924.peg.1416 CDS AZTV01000518.1 683 9 -2 - 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229924.peg.1417 CDS AZTV01000518.1 1221 760 -3 - 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229924.peg.1418 CDS AZTV01000518.1 3048 1276 -3 - 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229924.peg.1419 CDS AZTV01000519.1 532 326 -1 - 207 Tfp pilus assembly protein, pilus retraction ATPase PilT - none -
fig|6666666.229924.peg.1420 CDS AZTV01000521.1 46 435 1 + 390 unknown - none -
fig|6666666.229924.peg.1421 CDS AZTV01000521.1 439 2361 1 + 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 - none -
fig|6666666.229924.peg.1422 CDS AZTV01000521.1 2402 2575 2 + 174 hypothetical protein - none -
fig|6666666.229924.peg.1423 CDS AZTV01000522.1 86 1039 2 + 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) - none -
fig|6666666.229924.peg.1424 CDS AZTV01000524.1 17 193 2 + 177 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229924.peg.1425 CDS AZTV01000524.1 384 259 -3 - 126 hypothetical protein - none -
fig|6666666.229924.peg.1426 CDS AZTV01000525.1 927 385 -3 - 543 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229924.peg.1427 CDS AZTV01000525.1 1808 930 -2 - 879 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229924.peg.1428 CDS AZTV01000525.1 2585 1809 -2 - 777 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229924.peg.1429 CDS AZTV01000526.1 1140 727 -3 - 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229924.peg.1430 CDS AZTV01000526.1 1817 1206 -2 - 612 Nucleoid-associated protein NdpA - none -
fig|6666666.229924.peg.1431 CDS AZTV01000527.1 13 144 1 + 132 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) - none -
fig|6666666.229924.peg.1432 CDS AZTV01000529.1 615 7 -3 - 609 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229924.peg.1433 CDS AZTV01000529.1 1418 624 -2 - 795 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229924.peg.1434 CDS AZTV01000529.1 1514 1828 2 + 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229924.peg.1435 CDS AZTV01000530.1 9 1724 3 + 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229924.peg.1436 CDS AZTV01000530.1 1791 2120 3 + 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229924.peg.1437 CDS AZTV01000530.1 2160 2414 3 + 255 YgfY COG2938 - none -
fig|6666666.229924.peg.1438 CDS AZTV01000531.1 70 579 1 + 510 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229924.peg.1439 CDS AZTV01000531.1 855 640 -3 - 216 Protein SlyX - none -
fig|6666666.229924.peg.1440 CDS AZTV01000531.1 950 1675 2 + 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229924.peg.1441 CDS AZTV01000531.1 1755 2423 3 + 669 YheO-like PAS domain - none -
fig|6666666.229924.peg.1442 CDS AZTV01000531.1 2427 2804 3 + 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria
fig|6666666.229924.peg.1443 CDS AZTV01000531.1 2801 3163 2 + 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria
fig|6666666.229924.peg.1444 CDS AZTV01000531.1 3163 3453 1 + 291 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria
fig|6666666.229924.peg.1445 CDS AZTV01000531.1 4225 3458 -1 - 768 ABC-type polar amino acid transport system, ATPase component - none -
fig|6666666.229924.peg.1446 CDS AZTV01000531.1 4918 4235 -1 - 684 L-Cystine ABC transporter, permease protein TcyB - none -
fig|6666666.229924.peg.1447 CDS AZTV01000531.1 5720 4941 -2 - 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229924.peg.1448 CDS AZTV01000532.1 134 616 2 + 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended
fig|6666666.229924.peg.1449 CDS AZTV01000532.1 568 687 1 + 120 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended
fig|6666666.229924.peg.1450 CDS AZTV01000532.1 1859 684 -2 - 1176 GTP-binding protein Obg CBSS-176279.3.peg.868
fig|6666666.229924.peg.1451 CDS AZTV01000533.1 96 428 3 + 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229924.peg.1452 CDS AZTV01000533.1 2124 583 -3 - 1542 L-lactate permease Lactate utilization
fig|6666666.229924.peg.1453 CDS AZTV01000534.1 105 539 3 + 435 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229924.peg.1454 CDS AZTV01000534.1 570 2357 3 + 1788 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229924.peg.1455 CDS AZTV01000535.1 215 703 2 + 489 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229924.peg.1456 CDS AZTV01000536.1 154 879 1 + 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase - none -
fig|6666666.229924.peg.1457 CDS AZTV01000536.1 2662 959 -1 - 1704 FIG00362583: hypothetical protein - none -
fig|6666666.229924.peg.1458 CDS AZTV01000537.1 1333 638 -1 - 696 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229924.peg.1459 CDS AZTV01000539.1 880 110 -1 - 771 Probable protease htpX homolog - none -
fig|6666666.229924.peg.1460 CDS AZTV01000540.1 190 723 1 + 534 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229924.peg.1461 CDS AZTV01000540.1 1122 790 -3 - 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229924.peg.1462 CDS AZTV01000540.1 1851 1123 -3 - 729 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229924.peg.1463 CDS AZTV01000540.1 2788 1856 -1 - 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229924.peg.1464 CDS AZTV01000541.1 1275 355 -3 - 921 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229924.peg.1465 CDS AZTV01000542.1 1024 92 -1 - 933 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229924.peg.1466 CDS AZTV01000542.1 2679 1102 -3 - 1578 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229924.peg.1467 CDS AZTV01000542.1 2947 3210 1 + 264 SSU ribosomal protein S20p - none -
fig|6666666.229924.peg.1468 CDS AZTV01000543.1 64 489 1 + 426 Universal stress protein A Universal stress protein family
fig|6666666.229924.peg.1469 CDS AZTV01000544.1 616 266 -1 - 351 YPPCP.09C homologue - none -
fig|6666666.229924.peg.1470 CDS AZTV01000544.1 2386 803 -1 - 1584 Peptide chain release factor 3 - none -
fig|6666666.229924.peg.1471 CDS AZTV01000545.1 257 409 2 + 153 hypothetical protein - none -
fig|6666666.229924.peg.1472 CDS AZTV01000545.1 840 364 -3 - 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229924.peg.1473 CDS AZTV01000545.1 1940 939 -2 - 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229924.peg.1474 CDS AZTV01000545.1 2058 1921 -3 - 138 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229924.peg.1475 CDS AZTV01000546.1 158 27 -2 - 132 hypothetical protein - none -
fig|6666666.229924.peg.1476 CDS AZTV01000546.1 1131 229 -3 - 903 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229924.peg.1477 CDS AZTV01000546.1 2500 1217 -1 - 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229924.peg.1478 CDS AZTV01000546.1 3695 2577 -2 - 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229924.peg.1479 CDS AZTV01000552.1 1097 57 -2 - 1041 Ribosome small subunit-stimulated GTPase EngC - none -
fig|6666666.229924.peg.1480 CDS AZTV01000552.1 1169 1717 2 + 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229924.peg.1481 CDS AZTV01000553.1 76 729 1 + 654 Universal stress protein E Universal stress protein family
fig|6666666.229924.peg.1482 CDS AZTV01000555.1 492 638 3 + 147 hypothetical protein - none -
fig|6666666.229924.peg.1483 CDS AZTV01000556.1 1123 53 -1 - 1071 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229924.peg.1484 CDS AZTV01000556.1 1591 1196 -1 - 396 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229924.peg.1485 CDS AZTV01000556.1 1976 1647 -2 - 330 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229924.peg.1486 CDS AZTV01000557.1 1007 63 -2 - 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229924.peg.1487 CDS AZTV01000557.1 1468 1007 -1 - 462 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229924.peg.1488 CDS AZTV01000558.1 36 911 3 + 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229924.peg.1489 CDS AZTV01000559.1 1315 128 -1 - 1188 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229924.peg.1490 CDS AZTV01000560.1 167 1270 2 + 1104 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229924.peg.1491 CDS AZTV01000561.1 314 3 -2 - 312 hypothetical protein - none -
fig|6666666.229924.peg.1492 CDS AZTV01000562.1 3364 77 -1 - 3288 CRISPR-associated helicase Cas3, Yersinia-type CRISPRs
fig|6666666.229924.peg.1493 CDS AZTV01000562.1 4107 3361 -3 - 747 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229924.peg.1494 CDS AZTV01000563.1 221 1651 2 + 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229924.peg.1495 CDS AZTV01000563.1 1728 2267 3 + 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229924.peg.1496 CDS AZTV01000563.1 2264 2932 2 + 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229924.peg.1497 CDS AZTV01000565.1 49 1293 1 + 1245 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229924.peg.1498 CDS AZTV01000565.1 1305 1730 3 + 426 Nucleoside diphosphate kinase (EC 2.7.4.6) Purine conversions;
pyrimidine conversions
fig|6666666.229924.peg.1499 CDS AZTV01000567.1 656 21 -2 - 636 transcriptional regulator, putative - none -
fig|6666666.229924.peg.1500 CDS AZTV01000568.1 828 184 -3 - 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229924.peg.1501 CDS AZTV01000569.1 260 460 2 + 201 Mobile element protein - none -
fig|6666666.229924.peg.1502 CDS AZTV01000572.1 819 64 -3 - 756 Short chain dehydrogenase - none -
fig|6666666.229924.peg.1503 CDS AZTV01000572.1 1424 873 -2 - 552 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229924.peg.1504 CDS AZTV01000573.1 551 102 -2 - 450 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229924.peg.1505 CDS AZTV01000575.1 2333 1254 -2 - 1080 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229924.peg.1506 CDS AZTV01000575.1 3353 2355 -2 - 999 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229924.peg.1507 CDS AZTV01000576.1 173 772 2 + 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229924.peg.1508 CDS AZTV01000577.1 873 1277 3 + 405 hypothetical protein - none -
fig|6666666.229924.peg.1509 CDS AZTV01000577.1 2575 1295 -1 - 1281 Cell division protein FtsA Bacterial Cell Division;
cell division cluster containing FtsQ
fig|6666666.229924.peg.1510 CDS AZTV01000577.1 3187 2600 -1 - 588 Cell division protein FtsQ Bacterial Cell Division;
cell division cluster containing FtsQ
fig|6666666.229924.peg.1511 CDS AZTV01000578.1 1397 1143 -2 - 255 hypothetical protein - none -
fig|6666666.229924.peg.1512 CDS AZTV01000579.1 1214 156 -2 - 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229924.peg.1513 CDS AZTV01000580.1 66 470 3 + 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229924.peg.1514 CDS AZTV01000582.1 1822 101 -1 - 1722 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229924.peg.1515 CDS AZTV01000583.1 1346 852 -2 - 495 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229924.peg.1516 CDS AZTV01000583.1 3420 1339 -3 - 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229924.peg.1517 CDS AZTV01000583.1 3973 3422 -1 - 552 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229924.peg.1518 CDS AZTV01000584.1 1117 98 -1 - 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229924.peg.1519 CDS AZTV01000585.1 61 513 1 + 453 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229924.peg.1520 CDS AZTV01000588.1 20 1507 2 + 1488 PTS system, galactitol-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.229924.peg.1521 CDS AZTV01000588.1 1530 2510 3 + 981 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) - none -
fig|6666666.229924.peg.1522 CDS AZTV01000590.1 970 179 -1 - 792 putative lipoprotein - none -
fig|6666666.229924.peg.1523 CDS AZTV01000592.1 49 267 1 + 219 FIG074102: hypothetical protein - none -
fig|6666666.229924.peg.1524 CDS AZTV01000593.1 1115 318 -2 - 798 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229924.peg.1525 CDS AZTV01000594.1 463 2 -1 - 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229924.peg.1526 CDS AZTV01000594.1 1086 475 -3 - 612 Stringent starvation protein A Carbon Starvation
fig|6666666.229924.peg.1527 CDS AZTV01000596.1 1501 1370 -1 - 132 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229924.peg.1528 CDS AZTV01000597.1 1796 459 -2 - 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229924.peg.1529 CDS AZTV01000597.1 2651 1824 -2 - 828 Dihydropteroate synthase (EC 2.5.1.15) Folate biosynthesis cluster
fig|6666666.229924.peg.1530 CDS AZTV01000597.1 3855 2821 -3 - 1035 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229924.peg.1531 CDS AZTV01000598.1 38 793 2 + 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229924.peg.1532 CDS AZTV01000598.1 1916 840 -2 - 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229924.peg.1533 CDS AZTV01000598.1 2936 1920 -2 - 1017 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229924.peg.1534 CDS AZTV01000599.1 372 199 -3 - 174 hypothetical protein - none -
fig|6666666.229924.peg.1535 CDS AZTV01000601.1 579 457 -3 - 123 hypothetical protein - none -
fig|6666666.229924.peg.1536 CDS AZTV01000601.1 1531 725 -1 - 807 hypothetical protein - none -
fig|6666666.229924.peg.1537 CDS AZTV01000602.1 1438 77 -1 - 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229924.peg.1538 CDS AZTV01000604.1 2834 120 -2 - 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229924.peg.1539 CDS AZTV01000605.1 23 1216 2 + 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229924.peg.1540 CDS AZTV01000605.1 1219 2025 1 + 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229924.peg.1541 CDS AZTV01000608.1 211 480 1 + 270 Cytolethal distending toxin subunit B - none -
fig|6666666.229924.peg.1542 CDS AZTV01000610.1 138 287 3 + 150 Phosphoglycerate transport regulatory protein PgtC - none -
fig|6666666.229924.peg.1543 CDS AZTV01000611.1 21 1040 3 + 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229924.peg.1544 CDS AZTV01000612.1 537 85 -3 - 453 hypothetical protein - none -
fig|6666666.229924.peg.1545 CDS AZTV01000614.1 136 8 -1 - 129 hypothetical protein - none -
fig|6666666.229924.peg.1546 CDS AZTV01000614.1 209 87 -2 - 123 hypothetical protein - none -
fig|6666666.229924.peg.1547 CDS AZTV01000615.1 921 91 -3 - 831 Queuosine Biosynthesis QueC ATPase - none -
fig|6666666.229924.peg.1548 CDS AZTV01000615.1 1143 1607 3 + 465 FIG00710847: hypothetical protein - none -
fig|6666666.229924.peg.1549 CDS AZTV01000616.1 1025 663 -2 - 363 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229924.peg.1550 CDS AZTV01000622.1 1148 3 -2 - 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229924.peg.1551 CDS AZTV01000623.1 66 1403 3 + 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229924.peg.1552 CDS AZTV01000624.1 455 18 -2 - 438 hypothetical protein - none -
fig|6666666.229924.peg.1553 CDS AZTV01000625.1 700 563 -1 - 138 SSU ribosomal protein S12p (S23e) Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229924.peg.1554 CDS AZTV01000626.1 723 16 -3 - 708 Outer membrane protein A precursor Osmoregulation
fig|6666666.229924.peg.1555 CDS AZTV01000627.1 829 530 -1 - 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229924.peg.1556 CDS AZTV01000627.1 1806 823 -3 - 984 tRNA dihydrouridine synthase B (EC 1.-.-.-) - none -
fig|6666666.229924.peg.1557 CDS AZTV01000628.1 19 606 1 + 588 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229924.peg.1558 CDS AZTV01000628.1 950 609 -2 - 342 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229924.peg.1559 CDS AZTV01000629.1 228 914 3 + 687 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.229924.peg.1560 CDS AZTV01000629.1 1026 1610 3 + 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229924.peg.1561 CDS AZTV01000630.1 686 3 -2 - 684 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229924.peg.1562 CDS AZTV01000632.1 105 917 3 + 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229924.peg.1563 CDS AZTV01000633.1 14 640 2 + 627 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229924.peg.1564 CDS AZTV01000633.1 609 1412 3 + 804 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229924.peg.1565 CDS AZTV01000633.1 1412 2029 2 + 618 ABC transporter ATP-binding protein - none -
fig|6666666.229924.peg.1566 CDS AZTV01000635.1 118 1185 1 + 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229924.peg.1567 CDS AZTV01000636.1 56 1384 2 + 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229924.peg.1568 CDS AZTV01000637.1 398 15 -2 - 384 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229924.peg.1569 CDS AZTV01000638.1 829 134 -1 - 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229924.peg.1570 CDS AZTV01000638.1 1683 823 -3 - 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229924.peg.1571 CDS AZTV01000638.1 2473 1724 -1 - 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229924.peg.1572 CDS AZTV01000639.1 553 146 -1 - 408 putative lipoprotein - none -
fig|6666666.229924.peg.1573 CDS AZTV01000639.1 1950 562 -3 - 1389 putative exported protein - none -
fig|6666666.229924.peg.1574 CDS AZTV01000639.1 2530 1961 -1 - 570 FIG00698030: hypothetical protein - none -
fig|6666666.229924.peg.1575 CDS AZTV01000640.1 800 66 -2 - 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229924.peg.1576 CDS AZTV01000642.1 512 84 -2 - 429 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.1577 CDS AZTV01000643.1 752 159 -2 - 594 Transcriptional regulators, LysR family - none -
fig|6666666.229924.peg.1578 CDS AZTV01000644.1 91 273 1 + 183 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229924.peg.1579 CDS AZTV01000644.1 288 479 3 + 192 hypothetical protein - none -
fig|6666666.229924.peg.1580 CDS AZTV01000644.1 1044 562 -3 - 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229924.peg.1581 CDS AZTV01000644.1 1195 1386 1 + 192 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229924.peg.1582 CDS AZTV01000645.1 126 338 3 + 213 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229924.peg.1583 CDS AZTV01000646.1 6 1508 3 + 1503 unknown - none -
fig|6666666.229924.peg.1584 CDS AZTV01000647.1 356 799 2 + 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229924.peg.1585 CDS AZTV01000649.1 52 354 1 + 303 FIG004454: RNA binding protein - none -
fig|6666666.229924.peg.1586 CDS AZTV01000649.1 630 430 -3 - 201 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229924.peg.1587 CDS AZTV01000650.1 1571 39 -2 - 1533 GTP-binding protein EngA CBSS-290633.1.peg.1906
fig|6666666.229924.peg.1588 CDS AZTV01000653.1 1167 352 -3 - 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229924.peg.1589 CDS AZTV01000653.1 2201 1317 -2 - 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229924.peg.1590 CDS AZTV01000653.1 3443 2376 -2 - 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229924.peg.1591 CDS AZTV01000653.1 4428 3448 -3 - 981 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229924.peg.1592 CDS AZTV01000658.1 478 167 -1 - 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229924.peg.1593 CDS AZTV01000658.1 582 1175 3 + 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229924.peg.1594 CDS AZTV01000658.1 1281 1156 -3 - 126 hypothetical protein - none -
fig|6666666.229924.peg.1595 CDS AZTV01000659.1 178 1110 1 + 933 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229924.peg.1596 CDS AZTV01000660.1 15 1214 3 + 1200 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229924.peg.1597 CDS AZTV01000661.1 167 30 -2 - 138 hypothetical protein - none -
fig|6666666.229924.peg.1598 CDS AZTV01000661.1 820 185 -1 - 636 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229924.peg.1599 CDS AZTV01000662.1 193 549 1 + 357 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229924.peg.1600 CDS AZTV01000662.1 721 2109 1 + 1389 Putative protease - none -
fig|6666666.229924.peg.1601 CDS AZTV01000665.1 188 469 2 + 282 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229924.peg.1602 CDS AZTV01000670.1 725 549 -2 - 177 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.229924.peg.1603 CDS AZTV01000672.1 504 265 -3 - 240 hypothetical protein - none -
fig|6666666.229924.peg.1604 CDS AZTV01000674.1 36 1004 3 + 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229924.peg.1605 CDS AZTV01000678.1 78 662 3 + 585 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229924.peg.1606 CDS AZTV01000680.1 11 322 2 + 312 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229924.peg.1607 CDS AZTV01000682.1 883 287 -1 - 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229924.peg.1608 CDS AZTV01000682.1 1673 978 -2 - 696 probable periplasmic protein NMA1059 - none -
fig|6666666.229924.peg.1609 CDS AZTV01000683.1 93 1097 3 + 1005 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229924.peg.1610 CDS AZTV01000684.1 6 623 3 + 618 Outer membrane protein A precursor Osmoregulation
fig|6666666.229924.peg.1611 CDS AZTV01000687.1 357 115 -3 - 243 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229924.peg.1612 CDS AZTV01000688.1 44 511 2 + 468 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229924.peg.1613 CDS AZTV01000692.1 4 855 1 + 852 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229924.peg.1614 CDS AZTV01000694.1 49 708 1 + 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229924.peg.1615 CDS AZTV01000697.1 15 1352 3 + 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1
fig|6666666.229924.peg.1616 CDS AZTV01000705.1 362 24 -2 - 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229924.peg.1617 CDS AZTV01000707.1 318 124 -3 - 195 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229924.peg.1618 CDS AZTV01000709.1 16 660 1 + 645 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229924.peg.1619 CDS AZTV01000712.1 154 633 1 + 480 Translation initiation factor 3 - none -
fig|6666666.229924.peg.1620 CDS AZTV01000712.1 840 634 -3 - 207 hypothetical protein - none -
fig|6666666.229924.peg.1621 CDS AZTV01000713.1 54 770 3 + 717 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229924.peg.1622 CDS AZTV01000714.1 376 819 1 + 444 FIG00904084: hypothetical protein - none -
fig|6666666.229924.peg.1623 CDS AZTV01000714.1 1505 909 -2 - 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229924.peg.1624 CDS AZTV01000715.1 150 875 3 + 726 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229924.peg.1625 CDS AZTV01000716.1 83 220 2 + 138 hypothetical protein - none -
fig|6666666.229924.peg.1626 CDS AZTV01000717.1 1727 774 -2 - 954 Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) Lactose and Galactose Uptake and Utilization
fig|6666666.229924.peg.1627 CDS AZTV01000722.1 41 898 2 + 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229924.peg.1628 CDS AZTV01000724.1 304 987 1 + 684 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229924.peg.1629 CDS AZTV01000727.1 346 29 -1 - 318 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229924.peg.1630 CDS AZTV01000730.1 141 266 3 + 126 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster
fig|6666666.229924.peg.1631 CDS AZTV01000731.1 172 26 -1 - 147 hypothetical protein - none -
fig|6666666.229924.peg.1632 CDS AZTV01000734.1 646 50 -1 - 597 Phosphoglycerate transport regulatory protein PgtC - none -
fig|6666666.229924.peg.1633 CDS AZTV01000735.1 2 370 2 + 369 FIG00904286: hypothetical protein - none -
fig|6666666.229924.peg.1634 CDS AZTV01000736.1 886 281 -1 - 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229924.peg.1635 CDS AZTV01000737.1 40 732 1 + 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229924.peg.1636 CDS AZTV01000737.1 1425 838 -3 - 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229924.peg.1637 CDS AZTV01000740.1 12 155 3 + 144 hypothetical protein - none -
fig|6666666.229924.peg.1638 CDS AZTV01000741.1 935 504 -2 - 432 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229924.peg.1639 CDS AZTV01000744.1 93 449 3 + 357 FIG00696317: hypothetical protein - none -
fig|6666666.229924.peg.1640 CDS AZTV01000744.1 767 471 -2 - 297 Septum site-determining protein MinC Bacterial Cell Division;
Septum site-determining cluster Min
fig|6666666.229924.peg.1641 CDS AZTV01000745.1 100 1059 1 + 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229924.peg.1642 CDS AZTV01000745.1 1189 1073 -1 - 117 hypothetical protein - none -
fig|6666666.229924.peg.1643 CDS AZTV01000745.1 1364 1477 2 + 114 hypothetical protein - none -
fig|6666666.229924.peg.1644 CDS AZTV01000745.1 1700 1437 -2 - 264 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229924.peg.1645 CDS AZTV01000747.1 246 61 -3 - 186 Mobile element protein - none -
fig|6666666.229924.peg.1646 CDS AZTV01000750.1 4 558 1 + 555 FIG002003: Protein YdjA - none -
fig|6666666.229924.peg.1647 CDS AZTV01000751.1 86 685 2 + 600 ATP synthase F0 sector subunit a (EC 3.6.3.14) - none -
fig|6666666.229924.peg.1648 CDS AZTV01000753.1 1019 327 -2 - 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229924.peg.1649 CDS AZTV01000753.1 1294 1082 -1 - 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent - none -
fig|6666666.229924.peg.1650 CDS AZTV01000757.1 26 307 2 + 282 hypothetical protein - none -
fig|6666666.229924.peg.1651 CDS AZTV01000760.1 676 80 -1 - 597 Predicted transcriptional regulator of the myo-inositol catabolic operon - none -
fig|6666666.229924.peg.1652 CDS AZTV01000763.1 222 407 3 + 186 Probable tonB-dependent receptor HI1217 precursor - none -
fig|6666666.229924.peg.1653 CDS AZTV01000764.1 151 855 1 + 705 hypothetical protein - none -
fig|6666666.229924.peg.1654 CDS AZTV01000767.1 383 45 -2 - 339 conserved hypothetical protein - none -
fig|6666666.229924.peg.1655 CDS AZTV01000771.1 718 143 -1 - 576 hypothetical protein - none -
fig|6666666.229924.peg.1656 CDS AZTV01000772.1 69 569 3 + 501 Protein sprT - none -
fig|6666666.229924.peg.1657 CDS AZTV01000773.1 64 657 1 + 594 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental
fig|6666666.229924.peg.1658 CDS AZTV01000778.1 338 9 -2 - 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229924.peg.1659 CDS AZTV01000779.1 65 535 2 + 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229924.peg.1660 CDS AZTV01000781.1 368 96 -2 - 273 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229924.peg.1661 CDS AZTV01000783.1 308 90 -2 - 219 hypothetical protein - none -
fig|6666666.229924.peg.1662 CDS AZTV01000785.1 300 479 3 + 180 hypothetical protein - none -
fig|6666666.229924.peg.1663 CDS AZTV01000786.1 265 92 -1 - 174 hypothetical protein - none -
fig|6666666.229924.peg.1664 CDS AZTV01000787.1 295 62 -1 - 234 hypothetical protein - none -
fig|6666666.229924.rna.1 RNA AZTV01000020.1 109 181 1 + 73 tRNA-Glu-TTC - none -
fig|6666666.229924.rna.2 RNA AZTV01000020.1 391 3433 1 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229924.rna.3 RNA AZTV01000020.1 3682 3800 1 + 119 5S RNA - none -
fig|6666666.229924.rna.4 RNA AZTV01000026.1 2477 2404 -2 - 74 tRNA-Arg-ACG - none -
fig|6666666.229924.rna.5 RNA AZTV01000026.1 2608 2535 -1 - 74 tRNA-Arg-ACG - none -
fig|6666666.229924.rna.6 RNA AZTV01000026.1 2719 2629 -1 - 91 tRNA-Ser-GCT - none -
fig|6666666.229924.rna.7 RNA AZTV01000072.1 1430 54 -2 - 1377 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229924.rna.8 RNA AZTV01000139.1 460 387 -1 - 74 tRNA-Arg-TCT - none -
fig|6666666.229924.rna.9 RNA AZTV01000139.1 570 497 -3 - 74 tRNA-Pro-TGG - none -
fig|6666666.229924.rna.10 RNA AZTV01000139.1 648 576 -3 - 73 tRNA-His-GTG - none -
fig|6666666.229924.rna.11 RNA AZTV01000139.1 756 683 -3 - 74 tRNA-Arg-CCG - none -
fig|6666666.229924.rna.12 RNA AZTV01000220.1 198 112 -3 - 87 tRNA-Ser-TGA - none -
fig|6666666.229924.rna.13 RNA AZTV01000258.1 1815 1888 3 + 74 tRNA-Met-CAT - none -
fig|6666666.229924.rna.14 RNA AZTV01000263.1 139 67 -1 - 73 tRNA-Ala-TGC - none -
fig|6666666.229924.rna.15 RNA AZTV01000263.1 265 192 -1 - 74 tRNA-Ile-GAT - none -
fig|6666666.229924.rna.16 RNA AZTV01000314.1 3038 3128 2 + 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229924.rna.17 RNA AZTV01000349.1 1667 1753 2 + 87 tRNA-Ser-GGA - none -
fig|6666666.229924.rna.18 RNA AZTV01000454.1 58 131 1 + 74 tRNA-Met-CAT - none -
fig|6666666.229924.rna.19 RNA AZTV01000519.1 62 134 2 + 73 tRNA-Gly-GCC - none -
fig|6666666.229924.rna.20 RNA AZTV01000519.1 146 216 2 + 71 tRNA-Cys-GCA - none -
fig|6666666.229924.rna.21 RNA AZTV01000552.1 1816 1888 1 + 73 tRNA-Gly-GCC - none -
fig|6666666.229924.rna.22 RNA AZTV01000570.1 491 419 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.229924.rna.23 RNA AZTV01000570.1 629 546 -2 - 84 tRNA-Leu-TAA - none -
fig|6666666.229924.rna.24 RNA AZTV01000658.1 1390 1318 -1 - 73 tRNA-Asn-GTT - none -
fig|6666666.229924.rna.25 RNA AZTV01000658.1 1470 1398 -3 - 73 tRNA-Phe-GAA - none -
fig|6666666.229924.rna.26 RNA AZTV01000698.1 59 131 2 + 73 tRNA-Thr-TGT - none -
fig|6666666.229924.rna.27 RNA AZTV01000698.1 165 246 3 + 82 tRNA-Tyr-GTA - none -
fig|6666666.229924.rna.28 RNA AZTV01000698.1 290 361 2 + 72 tRNA-Gly-TCC - none -
fig|6666666.229924.rna.29 RNA AZTV01000698.1 368 440 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.229924.rna.30 RNA AZTV01000777.1 282 354 3 + 73 tRNA-Val-TAC - none -
fig|6666666.229924.rna.31 RNA AZTV01000777.1 391 450 1 + 60 tRNA-Pseudo-TAC - none -