fig|6666666.229928.peg.1 CDS AZTR01000001.1 2255 153 -2 - 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229928.peg.2 CDS AZTR01000001.1 2840 2370 -2 - 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229928.peg.3 CDS AZTR01000001.1 3130 2993 -1 - 138 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229928.peg.4 CDS AZTR01000001.1 3425 3309 -2 - 117 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229928.peg.5 CDS AZTR01000001.1 3894 3595 -3 - 300 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229928.peg.6 CDS AZTR01000001.1 4535 4720 2 + 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229928.peg.7 CDS AZTR01000001.1 4753 5634 1 + 882 Protein rarD - none -
fig|6666666.229928.peg.8 CDS AZTR01000001.1 6429 5629 -3 - 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229928.peg.9 CDS AZTR01000001.1 6984 6433 -3 - 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229928.peg.10 CDS AZTR01000001.1 7537 6989 -1 - 549 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229928.peg.11 CDS AZTR01000001.1 7540 9294 1 + 1755 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229928.peg.12 CDS AZTR01000001.1 9419 9967 2 + 549 FIG00903983: hypothetical protein - none -
fig|6666666.229928.peg.13 CDS AZTR01000001.1 9979 10305 1 + 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229928.peg.14 CDS AZTR01000001.1 10631 10317 -2 - 315 Uncharacterized protein PM1437 - none -
fig|6666666.229928.peg.15 CDS AZTR01000001.1 10674 11549 3 + 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229928.peg.16 CDS AZTR01000001.1 11611 12366 1 + 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229928.peg.17 CDS AZTR01000001.1 12709 14178 1 + 1470 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229928.peg.18 CDS AZTR01000001.1 14175 14297 3 + 123 hypothetical protein - none -
fig|6666666.229928.peg.19 CDS AZTR01000001.1 14346 15431 3 + 1086 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229928.peg.20 CDS AZTR01000001.1 17838 16021 -3 - 1818 ABC transporter ATP-binding protein - none -
fig|6666666.229928.peg.21 CDS AZTR01000001.1 17962 19620 1 + 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229928.peg.22 CDS AZTR01000001.1 19719 19588 -3 - 132 hypothetical protein - none -
fig|6666666.229928.peg.23 CDS AZTR01000001.1 19777 20490 1 + 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229928.peg.24 CDS AZTR01000001.1 20558 20701 2 + 144 hypothetical protein - none -
fig|6666666.229928.peg.25 CDS AZTR01000001.1 20715 21272 3 + 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229928.peg.26 CDS AZTR01000001.1 21301 22584 1 + 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229928.peg.27 CDS AZTR01000001.1 22606 23325 1 + 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229928.peg.28 CDS AZTR01000001.1 23340 24209 3 + 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.29 CDS AZTR01000001.1 24218 25552 2 + 1335 Membrane-associated zinc metalloprotease - none -
fig|6666666.229928.peg.30 CDS AZTR01000001.1 25571 27982 2 + 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229928.peg.31 CDS AZTR01000001.1 28087 28662 1 + 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229928.peg.32 CDS AZTR01000001.1 28662 29684 3 + 1023 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191) - none -
fig|6666666.229928.peg.33 CDS AZTR01000001.1 29821 30231 1 + 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229928.peg.34 CDS AZTR01000001.1 30252 31040 3 + 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.229928.peg.35 CDS AZTR01000001.1 31125 32309 3 + 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) Llipid A biosynthesis cluster
fig|6666666.229928.peg.36 CDS AZTR01000001.1 32302 32901 1 + 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229928.peg.37 CDS AZTR01000001.1 32941 34809 1 + 1869 Putative transport protein - none -
fig|6666666.229928.peg.38 CDS AZTR01000001.1 34820 35428 2 + 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.39 CDS AZTR01000001.1 35439 36071 3 + 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.40 CDS AZTR01000001.1 36071 37000 2 + 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.41 CDS AZTR01000001.1 37090 37671 1 + 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229928.peg.42 CDS AZTR01000001.1 38350 38234 -1 - 117 hypothetical protein - none -
fig|6666666.229928.peg.43 CDS AZTR01000002.1 109 411 1 + 303 Major pilus subunit of type IV secretion complex, VirB2 - none -
fig|6666666.229928.peg.44 CDS AZTR01000003.1 763 206 -1 - 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229928.peg.45 CDS AZTR01000003.1 960 1997 3 + 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229928.peg.46 CDS AZTR01000003.1 1987 2664 1 + 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229928.peg.47 CDS AZTR01000003.1 2699 3541 2 + 843 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229928.peg.48 CDS AZTR01000003.1 3647 4144 2 + 498 Phospholipid-binding protein - none -
fig|6666666.229928.peg.49 CDS AZTR01000003.1 4263 4739 3 + 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) Biotin synthesis cluster;
RNA methylation
fig|6666666.229928.peg.50 CDS AZTR01000003.1 5710 4835 -1 - 876 Membrane protein LAPB - none -
fig|6666666.229928.peg.51 CDS AZTR01000003.1 5833 5720 -1 - 114 hypothetical protein - none -
fig|6666666.229928.peg.52 CDS AZTR01000003.1 5843 6457 2 + 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229928.peg.53 CDS AZTR01000003.1 6572 7438 2 + 867 MG(2+) CHELATASE FAMILY PROTEIN CBSS-203122.12.peg.188
fig|6666666.229928.peg.54 CDS AZTR01000003.1 7541 9373 2 + 1833 hypothetical protein - none -
fig|6666666.229928.peg.55 CDS AZTR01000003.1 9382 10470 1 + 1089 hypothetical protein - none -
fig|6666666.229928.peg.56 CDS AZTR01000003.1 10467 11465 3 + 999 GTP pyrophosphokinase (EC 2.7.6.5) - none -
fig|6666666.229928.peg.57 CDS AZTR01000003.1 11680 14547 1 + 2868 DNA helicase IV CBSS-83333.1.peg.946;
DNA repair, bacterial UvrD and related helicases
fig|6666666.229928.peg.58 CDS AZTR01000003.1 14577 15815 3 + 1239 hypothetical protein - none -
fig|6666666.229928.peg.59 CDS AZTR01000003.1 15769 16554 1 + 786 hypothetical protein - none -
fig|6666666.229928.peg.60 CDS AZTR01000003.1 16714 16926 1 + 213 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229928.peg.61 CDS AZTR01000003.1 16938 17612 3 + 675 hypothetical protein - none -
fig|6666666.229928.peg.62 CDS AZTR01000003.1 18168 17692 -3 - 477 hypothetical protein - none -
fig|6666666.229928.peg.63 CDS AZTR01000003.1 20919 18298 -3 - 2622 FIG00647261: hypothetical protein - none -
fig|6666666.229928.peg.64 CDS AZTR01000003.1 22569 20929 -3 - 1641 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229928.peg.65 CDS AZTR01000003.1 22794 22582 -3 - 213 hypothetical protein - none -
fig|6666666.229928.peg.66 CDS AZTR01000003.1 24369 22915 -3 - 1455 FIGfam110555 CBSS-203122.12.peg.188
fig|6666666.229928.peg.67 CDS AZTR01000003.1 25448 24330 -2 - 1119 Mll9366 protein CBSS-203122.12.peg.188
fig|6666666.229928.peg.68 CDS AZTR01000003.1 26299 25406 -1 - 894 TniB NTP-binding protein CBSS-203122.12.peg.188
fig|6666666.229928.peg.69 CDS AZTR01000003.1 28083 26299 -3 - 1785 TniA putative transposase CBSS-203122.12.peg.188
fig|6666666.229928.peg.70 CDS AZTR01000003.1 28738 28076 -1 - 663 FIGfam050825 CBSS-203122.12.peg.188
fig|6666666.229928.peg.71 CDS AZTR01000003.1 28874 29578 2 + 705 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein CBSS-203122.12.peg.188;
CBSS-203122.12.peg.188
fig|6666666.229928.peg.72 CDS AZTR01000003.1 30417 29590 -3 - 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229928.peg.73 CDS AZTR01000003.1 31631 30414 -2 - 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229928.peg.74 CDS AZTR01000003.1 33540 31882 -3 - 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229928.peg.75 CDS AZTR01000003.1 33846 34529 3 + 684 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229928.peg.76 CDS AZTR01000003.1 35108 34614 -2 - 495 Protein yfbU - none -
fig|6666666.229928.peg.77 CDS AZTR01000003.1 35902 35126 -1 - 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229928.peg.78 CDS AZTR01000003.1 37551 35968 -3 - 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229928.peg.79 CDS AZTR01000003.1 38948 37617 -2 - 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229928.peg.80 CDS AZTR01000003.1 39496 38969 -1 - 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229928.peg.81 CDS AZTR01000003.1 39711 40418 3 + 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229928.peg.82 CDS AZTR01000003.1 40913 40800 -2 - 114 hypothetical protein - none -
fig|6666666.229928.peg.83 CDS AZTR01000003.1 41117 40983 -2 - 135 hypothetical protein - none -
fig|6666666.229928.peg.84 CDS AZTR01000003.1 42640 41396 -1 - 1245 Tryptophan-specific transport protein - none -
fig|6666666.229928.peg.85 CDS AZTR01000003.1 42802 43329 1 + 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229928.peg.86 CDS AZTR01000003.1 43405 44178 1 + 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229928.peg.87 CDS AZTR01000003.1 44857 45501 1 + 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229928.peg.88 CDS AZTR01000003.1 46592 45588 -2 - 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229928.peg.89 CDS AZTR01000003.1 48128 46767 -2 - 1362 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229928.peg.90 CDS AZTR01000003.1 48216 48800 3 + 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229928.peg.91 CDS AZTR01000003.1 49087 50052 1 + 966 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229928.peg.92 CDS AZTR01000003.1 50070 50867 3 + 798 PTS system, mannose-specific IIC component - none -
fig|6666666.229928.peg.93 CDS AZTR01000003.1 50881 51717 1 + 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229928.peg.94 CDS AZTR01000003.1 51827 53002 2 + 1176 Cof protein - none -
fig|6666666.229928.peg.95 CDS AZTR01000003.1 53294 54544 2 + 1251 Nucleoside permease NupC - none -
fig|6666666.229928.peg.96 CDS AZTR01000003.1 54670 55389 1 + 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229928.peg.97 CDS AZTR01000003.1 55407 55550 3 + 144 hypothetical protein - none -
fig|6666666.229928.peg.98 CDS AZTR01000003.1 55692 58079 3 + 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229928.peg.99 CDS AZTR01000003.1 58095 60011 3 + 1917 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229928.peg.100 CDS AZTR01000003.1 60020 61255 2 + 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229928.peg.101 CDS AZTR01000003.1 61258 61551 1 + 294 AagD - none -
fig|6666666.229928.peg.102 CDS AZTR01000003.1 61654 61514 -1 - 141 hypothetical protein - none -
fig|6666666.229928.peg.103 CDS AZTR01000003.1 62994 61669 -3 - 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229928.peg.104 CDS AZTR01000003.1 63165 63797 3 + 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229928.peg.105 CDS AZTR01000003.1 64529 63885 -2 - 645 hypothetical protein - none -
fig|6666666.229928.peg.106 CDS AZTR01000003.1 66070 65042 -1 - 1029 USG protein - none -
fig|6666666.229928.peg.107 CDS AZTR01000003.1 67801 66500 -1 - 1302 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229928.peg.108 CDS AZTR01000003.1 69603 68272 -3 - 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229928.peg.109 CDS AZTR01000003.1 69590 69718 2 + 129 hypothetical protein - none -
fig|6666666.229928.peg.110 CDS AZTR01000003.1 69702 70400 3 + 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229928.peg.111 CDS AZTR01000003.1 71164 70475 -1 - 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229928.peg.112 CDS AZTR01000003.1 71545 72204 1 + 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229928.peg.113 CDS AZTR01000003.1 72353 72201 -2 - 153 hypothetical protein - none -
fig|6666666.229928.peg.114 CDS AZTR01000003.1 73029 72523 -3 - 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229928.peg.115 CDS AZTR01000003.1 73727 73242 -2 - 486 Putative membrane protein - none -
fig|6666666.229928.peg.116 CDS AZTR01000003.1 74335 73730 -1 - 606 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229928.peg.117 CDS AZTR01000003.1 74937 74335 -3 - 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229928.peg.118 CDS AZTR01000003.1 75066 75446 3 + 381 FIG00782409: hypothetical protein - none -
fig|6666666.229928.peg.119 CDS AZTR01000003.1 77977 75962 -1 - 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229928.peg.120 CDS AZTR01000003.1 78217 77987 -1 - 231 FIG00696102: hypothetical protein - none -
fig|6666666.229928.peg.121 CDS AZTR01000003.1 78884 78321 -2 - 564 Outer membrane protein 18/16 - none -
fig|6666666.229928.peg.122 CDS AZTR01000003.1 79101 81902 3 + 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229928.peg.123 CDS AZTR01000003.1 81917 82039 2 + 123 hypothetical protein - none -
fig|6666666.229928.peg.124 CDS AZTR01000003.1 82289 82636 2 + 348 hypothetical protein - none -
fig|6666666.229928.peg.125 CDS AZTR01000003.1 84556 82742 -1 - 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229928.peg.126 CDS AZTR01000003.1 85359 84583 -3 - 777 Protein HI0205 precursor - none -
fig|6666666.229928.peg.127 CDS AZTR01000003.1 85616 85497 -2 - 120 hypothetical protein - none -
fig|6666666.229928.peg.128 CDS AZTR01000003.1 85638 86564 3 + 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229928.peg.129 CDS AZTR01000003.1 86734 87861 1 + 1128 Fic family protein - none -
fig|6666666.229928.peg.130 CDS AZTR01000003.1 87881 88924 2 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229928.peg.131 CDS AZTR01000003.1 89042 90937 2 + 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229928.peg.132 CDS AZTR01000003.1 91658 91023 -2 - 636 Cytochrome c-type protein NapC - none -
fig|6666666.229928.peg.133 CDS AZTR01000003.1 92121 91672 -3 - 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229928.peg.134 CDS AZTR01000003.1 93040 92159 -1 - 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229928.peg.135 CDS AZTR01000003.1 93900 93040 -3 - 861 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229928.peg.136 CDS AZTR01000003.1 96413 93927 -2 - 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229928.peg.137 CDS AZTR01000003.1 96731 96447 -2 - 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229928.peg.138 CDS AZTR01000003.1 96962 96798 -2 - 165 hypothetical protein - none -
fig|6666666.229928.peg.139 CDS AZTR01000003.1 97008 98711 3 + 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229928.peg.140 CDS AZTR01000003.1 98726 99751 2 + 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229928.peg.141 CDS AZTR01000003.1 99767 100081 2 + 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229928.peg.142 CDS AZTR01000003.1 100266 101114 3 + 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229928.peg.143 CDS AZTR01000003.1 101816 101181 -2 - 636 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229928.peg.144 CDS AZTR01000004.1 510 253 -3 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229928.peg.145 CDS AZTR01000004.1 701 510 -2 - 192 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.229928.peg.146 CDS AZTR01000004.1 1111 701 -1 - 411 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.229928.peg.147 CDS AZTR01000004.1 1832 1125 -2 - 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229928.peg.148 CDS AZTR01000004.1 2181 1849 -3 - 333 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.229928.peg.149 CDS AZTR01000004.1 2338 2192 -1 - 147 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229928.peg.150 CDS AZTR01000004.1 3314 2493 -2 - 822 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.229928.peg.151 CDS AZTR01000004.1 3637 3335 -1 - 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.229928.peg.152 CDS AZTR01000004.1 4236 3634 -3 - 603 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.229928.peg.153 CDS AZTR01000004.1 4878 4252 -3 - 627 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.229928.peg.154 CDS AZTR01000004.1 5206 4895 -1 - 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229928.peg.155 CDS AZTR01000004.1 6354 5458 -3 - 897 Transcriptional regulators, LysR family - none -
fig|6666666.229928.peg.156 CDS AZTR01000004.1 6692 7282 2 + 591 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229928.peg.157 CDS AZTR01000004.1 7294 7959 1 + 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229928.peg.158 CDS AZTR01000004.1 7962 9305 3 + 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229928.peg.159 CDS AZTR01000004.1 9323 10504 2 + 1182 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.229928.peg.160 CDS AZTR01000004.1 10934 10602 -2 - 333 Transcriptional regulator, AsnC family - none -
fig|6666666.229928.peg.161 CDS AZTR01000004.1 11068 10940 -1 - 129 Transcriptional regulator, AsnC family - none -
fig|6666666.229928.peg.162 CDS AZTR01000004.1 12688 11159 -1 - 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229928.peg.163 CDS AZTR01000004.1 13737 12805 -3 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229928.peg.164 CDS AZTR01000004.1 14751 13747 -3 - 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229928.peg.165 CDS AZTR01000004.1 14994 16385 3 + 1392 Chloride channel protein - none -
fig|6666666.229928.peg.166 CDS AZTR01000004.1 16388 17371 2 + 984 tRNA dihydrouridine synthase A - none -
fig|6666666.229928.peg.167 CDS AZTR01000004.1 18419 17427 -2 - 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229928.peg.168 CDS AZTR01000004.1 18585 19037 3 + 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229928.peg.169 CDS AZTR01000004.1 19071 19829 3 + 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229928.peg.170 CDS AZTR01000004.1 21027 19966 -3 - 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229928.peg.171 CDS AZTR01000004.1 21101 21451 2 + 351 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229928.peg.172 CDS AZTR01000004.1 21917 21555 -2 - 363 FIG00696564: hypothetical protein - none -
fig|6666666.229928.peg.173 CDS AZTR01000004.1 22152 21868 -3 - 285 hypothetical protein - none -
fig|6666666.229928.peg.174 CDS AZTR01000004.1 22361 23692 2 + 1332 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229928.peg.175 CDS AZTR01000004.1 23817 24221 3 + 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229928.peg.176 CDS AZTR01000004.1 24348 24566 3 + 219 hypothetical protein - none -
fig|6666666.229928.peg.177 CDS AZTR01000004.1 25246 24650 -1 - 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229928.peg.178 CDS AZTR01000004.1 26060 25341 -2 - 720 probable periplasmic protein NMA1059 - none -
fig|6666666.229928.peg.179 CDS AZTR01000004.1 26545 26111 -1 - 435 Ribonuclease E inhibitor RraB RNA processing and degradation, bacterial
fig|6666666.229928.peg.180 CDS AZTR01000004.1 27035 26640 -2 - 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229928.peg.181 CDS AZTR01000004.1 28521 27145 -3 - 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229928.peg.182 CDS AZTR01000004.1 29900 28545 -2 - 1356 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.229928.peg.183 CDS AZTR01000004.1 30856 29900 -1 - 957 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229928.peg.184 CDS AZTR01000004.1 31434 30922 -3 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229928.peg.185 CDS AZTR01000005.1 27 1319 3 + 1293 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229928.peg.186 CDS AZTR01000005.1 2564 1407 -2 - 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229928.peg.187 CDS AZTR01000005.1 4323 2647 -3 - 1677 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229928.peg.188 CDS AZTR01000005.1 4923 4366 -3 - 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229928.peg.189 CDS AZTR01000005.1 5678 4956 -2 - 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.229928.peg.190 CDS AZTR01000005.1 7618 5681 -1 - 1938 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229928.peg.191 CDS AZTR01000005.1 7694 8509 2 + 816 Aldose 1-epimerase - none -
fig|6666666.229928.peg.192 CDS AZTR01000005.1 8919 9776 3 + 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229928.peg.193 CDS AZTR01000005.1 9836 10789 2 + 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229928.peg.194 CDS AZTR01000005.1 10895 12658 2 + 1764 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229928.peg.195 CDS AZTR01000005.1 12658 14391 1 + 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229928.peg.196 CDS AZTR01000005.1 14902 14774 -1 - 129 hypothetical protein - none -
fig|6666666.229928.peg.197 CDS AZTR01000005.1 15684 14899 -3 - 786 serine/threonine protein kinase - none -
fig|6666666.229928.peg.198 CDS AZTR01000005.1 16340 15705 -2 - 636 unknown - none -
fig|6666666.229928.peg.199 CDS AZTR01000005.1 16428 16640 3 + 213 hypothetical protein - none -
fig|6666666.229928.peg.200 CDS AZTR01000005.1 16656 17012 3 + 357 Putative lipoprotein yceB precursor - none -
fig|6666666.229928.peg.201 CDS AZTR01000006.1 1978 506 -1 - 1473 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229928.peg.202 CDS AZTR01000006.1 3346 2027 -1 - 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229928.peg.203 CDS AZTR01000006.1 3604 4602 1 + 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229928.peg.204 CDS AZTR01000006.1 4662 5927 3 + 1266 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229928.peg.205 CDS AZTR01000006.1 5971 6174 1 + 204 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229928.peg.206 CDS AZTR01000006.1 6178 7245 1 + 1068 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229928.peg.207 CDS AZTR01000006.1 7255 8451 1 + 1197 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229928.peg.208 CDS AZTR01000006.1 8504 8833 2 + 330 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229928.peg.209 CDS AZTR01000006.1 8864 9673 2 + 810 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229928.peg.210 CDS AZTR01000006.1 9722 9847 2 + 126 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229928.peg.211 CDS AZTR01000006.1 9973 9851 -1 - 123 hypothetical protein - none -
fig|6666666.229928.peg.212 CDS AZTR01000006.1 9962 11134 2 + 1173 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229928.peg.213 CDS AZTR01000006.1 12618 11161 -3 - 1458 Permeases of the major facilitator superfamily - none -
fig|6666666.229928.peg.214 CDS AZTR01000006.1 12755 12639 -2 - 117 hypothetical protein - none -
fig|6666666.229928.peg.215 CDS AZTR01000006.1 12904 13902 1 + 999 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229928.peg.216 CDS AZTR01000006.1 13914 14717 3 + 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229928.peg.217 CDS AZTR01000006.1 14826 15569 3 + 744 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229928.peg.218 CDS AZTR01000006.1 17354 15750 -2 - 1605 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229928.peg.219 CDS AZTR01000006.1 17649 17455 -3 - 195 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229928.peg.220 CDS AZTR01000006.1 18583 17630 -1 - 954 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229928.peg.221 CDS AZTR01000006.1 19781 18792 -2 - 990 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229928.peg.222 CDS AZTR01000006.1 20612 19830 -2 - 783 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229928.peg.223 CDS AZTR01000006.1 22818 20677 -3 - 2142 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229928.peg.224 CDS AZTR01000006.1 23119 22967 -1 - 153 hypothetical protein - none -
fig|6666666.229928.peg.225 CDS AZTR01000006.1 23124 24170 3 + 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229928.peg.226 CDS AZTR01000006.1 24659 24231 -2 - 429 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.229928.peg.227 CDS AZTR01000006.1 26074 24701 -1 - 1374 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229928.peg.228 CDS AZTR01000006.1 26960 26091 -2 - 870 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229928.peg.229 CDS AZTR01000006.1 28517 26976 -2 - 1542 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229928.peg.230 CDS AZTR01000006.1 29078 28530 -2 - 549 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229928.peg.231 CDS AZTR01000006.1 29562 29092 -3 - 471 ATP synthase F0 sector subunit b - none -
fig|6666666.229928.peg.232 CDS AZTR01000006.1 29866 29612 -1 - 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) - none -
fig|6666666.229928.peg.233 CDS AZTR01000006.1 30708 29920 -3 - 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229928.peg.234 CDS AZTR01000006.1 31110 30733 -3 - 378 FIG048548: ATP synthase protein I2 - none -
fig|6666666.229928.peg.235 CDS AZTR01000006.1 31905 31222 -3 - 684 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229928.peg.236 CDS AZTR01000006.1 32260 31898 -1 - 363 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229928.peg.237 CDS AZTR01000006.1 32511 33269 3 + 759 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229928.peg.238 CDS AZTR01000006.1 35430 33541 -3 - 1890 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229928.peg.239 CDS AZTR01000006.1 36316 35873 -1 - 444 Flavoprotein MioC Flavodoxin
fig|6666666.229928.peg.240 CDS AZTR01000006.1 36591 36373 -3 - 219 FIG074102: hypothetical protein - none -
fig|6666666.229928.peg.241 CDS AZTR01000006.1 36787 37800 1 + 1014 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229928.peg.242 CDS AZTR01000006.1 38242 37838 -1 - 405 hypothetical protein - none -
fig|6666666.229928.peg.243 CDS AZTR01000006.1 38263 38394 1 + 132 hypothetical protein - none -
fig|6666666.229928.peg.244 CDS AZTR01000006.1 39239 38442 -2 - 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229928.peg.245 CDS AZTR01000006.1 40255 39242 -1 - 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.246 CDS AZTR01000006.1 40846 40334 -1 - 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229928.peg.247 CDS AZTR01000006.1 41284 40862 -1 - 423 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229928.peg.248 CDS AZTR01000006.1 41629 42951 1 + 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229928.peg.249 CDS AZTR01000006.1 43120 44868 1 + 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229928.peg.250 CDS AZTR01000006.1 44885 46519 2 + 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229928.peg.251 CDS AZTR01000006.1 47251 46631 -1 - 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229928.peg.252 CDS AZTR01000006.1 48162 47263 -3 - 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229928.peg.253 CDS AZTR01000006.1 48321 49049 3 + 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229928.peg.254 CDS AZTR01000006.1 49325 49110 -2 - 216 Protein SlyX - none -
fig|6666666.229928.peg.255 CDS AZTR01000006.1 49420 50145 1 + 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229928.peg.256 CDS AZTR01000006.1 50225 50893 2 + 669 YheO-like PAS domain - none -
fig|6666666.229928.peg.257 CDS AZTR01000006.1 50897 51274 2 + 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229928.peg.258 CDS AZTR01000006.1 51271 51633 1 + 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229928.peg.259 CDS AZTR01000006.1 51636 51923 3 + 288 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229928.peg.260 CDS AZTR01000006.1 52695 51928 -3 - 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229928.peg.261 CDS AZTR01000006.1 53388 52705 -3 - 684 ABC-type amino acid transport system, permease component - none -
fig|6666666.229928.peg.262 CDS AZTR01000006.1 54190 53411 -1 - 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229928.peg.263 CDS AZTR01000006.1 55611 54316 -3 - 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229928.peg.264 CDS AZTR01000006.1 57100 55736 -1 - 1365 lipoprotein, putative - none -
fig|6666666.229928.peg.265 CDS AZTR01000006.1 59957 59043 -2 - 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229928.peg.266 CDS AZTR01000006.1 61084 59954 -1 - 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229928.peg.267 CDS AZTR01000006.1 61170 62540 3 + 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229928.peg.268 CDS AZTR01000006.1 63784 62693 -1 - 1092 Putative exported protein precursor - none -
fig|6666666.229928.peg.269 CDS AZTR01000006.1 64671 63922 -3 - 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229928.peg.270 CDS AZTR01000006.1 65370 64699 -3 - 672 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229928.peg.271 CDS AZTR01000006.1 66295 65936 -1 - 360 Mobile element protein - none -
fig|6666666.229928.peg.272 CDS AZTR01000006.1 66719 66528 -2 - 192 Integrase - none -
fig|6666666.229928.peg.273 CDS AZTR01000006.1 67663 67433 -1 - 231 hypothetical protein - none -
fig|6666666.229928.peg.274 CDS AZTR01000006.1 70395 67660 -3 - 2736 Putative uncharacterized protein ydbH - none -
fig|6666666.229928.peg.275 CDS AZTR01000006.1 71118 70501 -3 - 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229928.peg.276 CDS AZTR01000006.1 71199 73124 3 + 1926 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229928.peg.277 CDS AZTR01000006.1 73272 74330 3 + 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229928.peg.278 CDS AZTR01000006.1 74412 74870 3 + 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229928.peg.279 CDS AZTR01000006.1 74947 75336 1 + 390 Endoribonuclease L-PSP - none -
fig|6666666.229928.peg.280 CDS AZTR01000006.1 77519 75408 -2 - 2112 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229928.peg.281 CDS AZTR01000006.1 78491 77538 -2 - 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229928.peg.282 CDS AZTR01000007.1 593 1444 2 + 852 Cytolethal distending toxin subunit B - none -
fig|6666666.229928.peg.283 CDS AZTR01000007.1 1455 2015 3 + 561 Cytolethal distending toxin subunit C - none -
fig|6666666.229928.peg.284 CDS AZTR01000007.1 3376 3233 -1 - 144 hypothetical protein - none -
fig|6666666.229928.peg.285 CDS AZTR01000007.1 3545 3384 -2 - 162 Protein with ParB-like nuclease domain in PFGI-1-like cluster - none -
fig|6666666.229928.peg.286 CDS AZTR01000007.1 4826 4269 -2 - 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.287 CDS AZTR01000007.1 5081 6271 2 + 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229928.peg.288 CDS AZTR01000007.1 6485 7537 2 + 1053 Outer membrane protein P2 precursor (OMP P2) - none -
fig|6666666.229928.peg.289 CDS AZTR01000007.1 7681 7938 1 + 258 hypothetical protein - none -
fig|6666666.229928.peg.290 CDS AZTR01000007.1 7938 8285 3 + 348 Programmed cell death toxin ChpB - none -
fig|6666666.229928.peg.291 CDS AZTR01000007.1 9490 8363 -1 - 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229928.peg.292 CDS AZTR01000007.1 11827 9926 -1 - 1902 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229928.peg.293 CDS AZTR01000007.1 12113 13546 2 + 1434 Putative GTP-binding protein YdgA - none -
fig|6666666.229928.peg.294 CDS AZTR01000007.1 15639 13906 -3 - 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229928.peg.295 CDS AZTR01000007.1 15736 16323 1 + 588 Protein yecM - none -
fig|6666666.229928.peg.296 CDS AZTR01000007.1 16365 16820 3 + 456 Outer membrane lipoprotein - none -
fig|6666666.229928.peg.297 CDS AZTR01000007.1 16960 18042 1 + 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.229928.peg.298 CDS AZTR01000007.1 18082 18981 1 + 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.229928.peg.299 CDS AZTR01000007.1 18991 19845 1 + 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation
fig|6666666.229928.peg.300 CDS AZTR01000007.1 20025 20534 3 + 510 probable lipoprotein NlpC - none -
fig|6666666.229928.peg.301 CDS AZTR01000007.1 21182 20931 -2 - 252 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229928.peg.302 CDS AZTR01000007.1 21266 21928 2 + 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229928.peg.303 CDS AZTR01000007.1 22495 21950 -1 - 546 FIG00696317: hypothetical protein - none -
fig|6666666.229928.peg.304 CDS AZTR01000007.1 23186 22719 -2 - 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229928.peg.305 CDS AZTR01000007.1 24536 23199 -2 - 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229928.peg.306 CDS AZTR01000007.1 25392 24565 -3 - 828 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229928.peg.307 CDS AZTR01000007.1 26644 25562 -1 - 1083 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229928.peg.308 CDS AZTR01000007.1 26974 26720 -1 - 255 hypothetical protein - none -
fig|6666666.229928.peg.309 CDS AZTR01000007.1 27396 27845 3 + 450 ImpA - none -
fig|6666666.229928.peg.310 CDS AZTR01000007.1 28282 28118 -1 - 165 hypothetical protein - none -
fig|6666666.229928.peg.311 CDS AZTR01000007.1 30043 28577 -1 - 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.229928.peg.312 CDS AZTR01000007.1 30185 31117 2 + 933 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin biosynthesis;
Biotin synthesis cluster;
Biotin synthesis cluster
fig|6666666.229928.peg.313 CDS AZTR01000007.1 31204 31407 1 + 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229928.peg.314 CDS AZTR01000009.1 4100 189 -2 - 3912 HrpA-like helicases - none -
fig|6666666.229928.peg.315 CDS AZTR01000009.1 4360 4097 -1 - 264 COG2363 - none -
fig|6666666.229928.peg.316 CDS AZTR01000010.1 968 150 -2 - 819 Peptide transport system ATP-binding protein SapF - none -
fig|6666666.229928.peg.317 CDS AZTR01000010.1 2024 972 -2 - 1053 Peptide transport system ATP-binding protein SapD - none -
fig|6666666.229928.peg.318 CDS AZTR01000010.1 2919 2032 -3 - 888 Peptide transport system permease protein SapC - none -
fig|6666666.229928.peg.319 CDS AZTR01000010.1 3874 2909 -1 - 966 Peptide transport system permease protein SapB - none -
fig|6666666.229928.peg.320 CDS AZTR01000010.1 5505 3874 -3 - 1632 Peptide transport periplasmic protein sapA (TC 3.A.1.5.5) - none -
fig|6666666.229928.peg.321 CDS AZTR01000010.1 5770 7185 1 + 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229928.peg.322 CDS AZTR01000010.1 7198 8277 1 + 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229928.peg.323 CDS AZTR01000010.1 8361 9320 3 + 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229928.peg.324 CDS AZTR01000010.1 9451 9317 -1 - 135 hypothetical protein - none -
fig|6666666.229928.peg.325 CDS AZTR01000010.1 9685 9536 -1 - 150 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229928.peg.326 CDS AZTR01000010.1 9996 9700 -3 - 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229928.peg.327 CDS AZTR01000010.1 11059 10115 -1 - 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229928.peg.328 CDS AZTR01000010.1 12924 11074 -3 - 1851 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229928.peg.329 CDS AZTR01000010.1 14411 12924 -2 - 1488 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229928.peg.330 CDS AZTR01000010.1 14860 14408 -1 - 453 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE
fig|6666666.229928.peg.331 CDS AZTR01000010.1 14877 15005 3 + 129 hypothetical protein - none -
fig|6666666.229928.peg.332 CDS AZTR01000010.1 16851 15058 -3 - 1794 Mlr4739 protein - none -
fig|6666666.229928.peg.333 CDS AZTR01000010.1 18159 17239 -3 - 921 RfbJ protein - none -
fig|6666666.229928.peg.334 CDS AZTR01000010.1 19675 18167 -1 - 1509 conserved domain protein - none -
fig|6666666.229928.peg.335 CDS AZTR01000010.1 20279 19662 -2 - 618 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229928.peg.336 CDS AZTR01000010.1 21822 20308 -3 - 1515 Dca - none -
fig|6666666.229928.peg.337 CDS AZTR01000010.1 22889 22341 -2 - 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229928.peg.338 CDS AZTR01000010.1 22960 24000 1 + 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229928.peg.339 CDS AZTR01000010.1 24221 24478 2 + 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229928.peg.340 CDS AZTR01000010.1 24592 26319 1 + 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229928.peg.341 CDS AZTR01000010.1 26380 26880 1 + 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229928.peg.342 CDS AZTR01000010.1 27194 27006 -2 - 189 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229928.peg.343 CDS AZTR01000011.1 1827 2192 3 + 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229928.peg.344 CDS AZTR01000011.1 2248 3786 1 + 1539 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229928.peg.345 CDS AZTR01000011.1 4648 4061 -1 - 588 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.229928.peg.346 CDS AZTR01000011.1 5625 4651 -3 - 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.229928.peg.347 CDS AZTR01000011.1 5727 6293 3 + 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.229928.peg.348 CDS AZTR01000011.1 6449 7393 2 + 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229928.peg.349 CDS AZTR01000011.1 7936 9120 1 + 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229928.peg.350 CDS AZTR01000011.1 9135 9821 3 + 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229928.peg.351 CDS AZTR01000011.1 9821 11071 2 + 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229928.peg.352 CDS AZTR01000011.1 11172 12251 3 + 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229928.peg.353 CDS AZTR01000011.1 12382 12260 -1 - 123 hypothetical protein - none -
fig|6666666.229928.peg.354 CDS AZTR01000011.1 12397 13803 1 + 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229928.peg.355 CDS AZTR01000011.1 13827 14909 3 + 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229928.peg.356 CDS AZTR01000011.1 14925 16574 3 + 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229928.peg.357 CDS AZTR01000011.1 16714 17187 1 + 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229928.peg.358 CDS AZTR01000011.1 17194 17619 1 + 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229928.peg.359 CDS AZTR01000011.1 17638 18621 1 + 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229928.peg.360 CDS AZTR01000011.1 18631 19122 1 + 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229928.peg.361 CDS AZTR01000011.1 19131 19751 3 + 621 L-lysine permease - none -
fig|6666666.229928.peg.362 CDS AZTR01000011.1 19773 20585 3 + 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229928.peg.363 CDS AZTR01000011.1 20613 20744 3 + 132 hypothetical protein - none -
fig|6666666.229928.peg.364 CDS AZTR01000011.1 20945 20697 -2 - 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229928.peg.365 CDS AZTR01000011.1 21282 21013 -3 - 270 hypothetical protein - none -
fig|6666666.229928.peg.366 CDS AZTR01000011.1 22434 21304 -3 - 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229928.peg.367 CDS AZTR01000011.1 23292 22636 -3 - 657 hypothetical protein - none -
fig|6666666.229928.peg.368 CDS AZTR01000011.1 25616 23346 -2 - 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229928.peg.369 CDS AZTR01000011.1 25953 25825 -3 - 129 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229928.peg.370 CDS AZTR01000011.1 27392 25950 -2 - 1443 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229928.peg.371 CDS AZTR01000011.1 27530 27652 2 + 123 hypothetical protein - none -
fig|6666666.229928.peg.372 CDS AZTR01000011.1 27663 28691 3 + 1029 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229928.peg.373 CDS AZTR01000011.1 28743 30773 3 + 2031 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229928.peg.374 CDS AZTR01000011.1 30757 31797 1 + 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229928.peg.375 CDS AZTR01000011.1 31869 31756 -3 - 114 hypothetical protein - none -
fig|6666666.229928.peg.376 CDS AZTR01000011.1 33905 31854 -2 - 2052 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229928.peg.377 CDS AZTR01000011.1 34890 34000 -3 - 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229928.peg.378 CDS AZTR01000011.1 36456 34912 -3 - 1545 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229928.peg.379 CDS AZTR01000011.1 36611 36480 -2 - 132 hypothetical protein - none -
fig|6666666.229928.peg.380 CDS AZTR01000011.1 37770 36580 -3 - 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229928.peg.381 CDS AZTR01000011.1 38227 39345 1 + 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229928.peg.382 CDS AZTR01000011.1 39422 40705 2 + 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229928.peg.383 CDS AZTR01000011.1 40791 41690 3 + 900 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229928.peg.384 CDS AZTR01000011.1 41761 41892 1 + 132 hypothetical protein - none -
fig|6666666.229928.peg.385 CDS AZTR01000011.1 42798 42067 -3 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229928.peg.386 CDS AZTR01000011.1 44028 42814 -3 - 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229928.peg.387 CDS AZTR01000011.1 44157 44813 3 + 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229928.peg.388 CDS AZTR01000011.1 46354 44912 -1 - 1443 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229928.peg.389 CDS AZTR01000011.1 46422 46991 3 + 570 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229928.peg.390 CDS AZTR01000011.1 47368 47066 -1 - 303 FIG004454: RNA binding protein - none -
fig|6666666.229928.peg.391 CDS AZTR01000011.1 47536 47847 1 + 312 Phage-related protein - none -
fig|6666666.229928.peg.392 CDS AZTR01000011.1 47832 48128 3 + 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229928.peg.393 CDS AZTR01000011.1 48775 48161 -1 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229928.peg.394 CDS AZTR01000011.1 48802 50199 1 + 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229928.peg.395 CDS AZTR01000011.1 50983 50504 -1 - 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229928.peg.396 CDS AZTR01000011.1 51044 52015 2 + 972 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229928.peg.397 CDS AZTR01000011.1 52071 52394 3 + 324 capsular polysaccharide biosynthesis protein, putative - none -
fig|6666666.229928.peg.398 CDS AZTR01000013.1 137 334 2 + 198 hypothetical protein - none -
fig|6666666.229928.peg.399 CDS AZTR01000013.1 1315 767 -1 - 549 putative membrane protein - none -
fig|6666666.229928.peg.400 CDS AZTR01000013.1 1302 1436 3 + 135 hypothetical protein - none -
fig|6666666.229928.peg.401 CDS AZTR01000013.1 1451 2215 2 + 765 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229928.peg.402 CDS AZTR01000013.1 3486 2479 -3 - 1008 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229928.peg.403 CDS AZTR01000013.1 3644 5017 2 + 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229928.peg.404 CDS AZTR01000013.1 5397 6515 3 + 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229928.peg.405 CDS AZTR01000013.1 6515 7285 2 + 771 HesA/MoeB/ThiF family protein related to EC-YgdL - none -
fig|6666666.229928.peg.406 CDS AZTR01000013.1 7385 8404 2 + 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229928.peg.407 CDS AZTR01000013.1 8532 9344 3 + 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229928.peg.408 CDS AZTR01000013.1 9915 9424 -3 - 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229928.peg.409 CDS AZTR01000013.1 10870 9926 -1 - 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229928.peg.410 CDS AZTR01000013.1 10946 11623 2 + 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229928.peg.411 CDS AZTR01000013.1 11699 11580 -2 - 120 hypothetical protein - none -
fig|6666666.229928.peg.412 CDS AZTR01000013.1 11996 11733 -2 - 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229928.peg.413 CDS AZTR01000013.1 12264 13841 3 + 1578 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229928.peg.414 CDS AZTR01000013.1 13919 14845 2 + 927 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229928.peg.415 CDS AZTR01000013.1 15059 15223 2 + 165 FIG01055344: hypothetical protein - none -
fig|6666666.229928.peg.416 CDS AZTR01000013.1 15261 18083 3 + 2823 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229928.peg.417 CDS AZTR01000013.1 18163 18657 1 + 495 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229928.peg.418 CDS AZTR01000013.1 18657 19601 3 + 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229928.peg.419 CDS AZTR01000013.1 21364 20066 -1 - 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229928.peg.420 CDS AZTR01000013.1 22421 21528 -2 - 894 Tyrosine recombinase XerD - none -
fig|6666666.229928.peg.421 CDS AZTR01000013.1 23584 22424 -1 - 1161 Probable 3-phenylpropionic acid transporter - none -
fig|6666666.229928.peg.422 CDS AZTR01000013.1 23823 23584 -3 - 240 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229928.peg.423 CDS AZTR01000013.1 24287 23829 -2 - 459 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229928.peg.424 CDS AZTR01000013.1 24350 25255 2 + 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229928.peg.425 CDS AZTR01000013.1 25720 25346 -1 - 375 opacity associated protein - none -
fig|6666666.229928.peg.426 CDS AZTR01000013.1 27095 25782 -2 - 1314 Cell envelope opacity-associated protein A - none -
fig|6666666.229928.peg.427 CDS AZTR01000013.1 28297 27266 -1 - 1032 Lysyl-lysine 2,3-aminomutase Translation elongation factor P lysylation
fig|6666666.229928.peg.428 CDS AZTR01000013.1 28362 28883 3 + 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229928.peg.429 CDS AZTR01000013.1 29213 30589 2 + 1377 Tyrosine phenol-lyase (EC 4.1.99.2) - none -
fig|6666666.229928.peg.430 CDS AZTR01000013.1 30751 31965 1 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229928.peg.431 CDS AZTR01000013.1 32708 32031 -2 - 678 YheO-like PAS domain - none -
fig|6666666.229928.peg.432 CDS AZTR01000013.1 33277 32771 -1 - 507 Arabinose efflux permease - none -
fig|6666666.229928.peg.433 CDS AZTR01000013.1 34001 33270 -2 - 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) Llipid A biosynthesis cluster
fig|6666666.229928.peg.434 CDS AZTR01000013.1 34112 34855 2 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.435 CDS AZTR01000013.1 34999 34883 -1 - 117 hypothetical protein - none -
fig|6666666.229928.peg.436 CDS AZTR01000014.1 11 952 2 + 942 Putative cell division protein precursor - none -
fig|6666666.229928.peg.437 CDS AZTR01000014.1 1886 1023 -2 - 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229928.peg.438 CDS AZTR01000014.1 2768 2028 -2 - 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229928.peg.439 CDS AZTR01000014.1 5225 2913 -2 - 2313 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229928.peg.440 CDS AZTR01000014.1 6175 5324 -1 - 852 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229928.peg.441 CDS AZTR01000015.1 27 239 3 + 213 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229928.peg.442 CDS AZTR01000015.1 240 593 3 + 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229928.peg.443 CDS AZTR01000015.1 595 1641 1 + 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229928.peg.444 CDS AZTR01000015.1 1643 2203 2 + 561 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229928.peg.445 CDS AZTR01000015.1 2323 2820 1 + 498 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229928.peg.446 CDS AZTR01000015.1 3885 2920 -3 - 966 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229928.peg.447 CDS AZTR01000015.1 4867 3947 -1 - 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229928.peg.448 CDS AZTR01000015.1 5433 4867 -3 - 567 FIG00696199: hypothetical protein - none -
fig|6666666.229928.peg.449 CDS AZTR01000015.1 6214 5435 -1 - 780 UPF0246 protein YaaA - none -
fig|6666666.229928.peg.450 CDS AZTR01000015.1 6904 6236 -1 - 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229928.peg.451 CDS AZTR01000015.1 7190 7573 2 + 384 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229928.peg.452 CDS AZTR01000015.1 7737 9533 3 + 1797 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229928.peg.453 CDS AZTR01000015.1 9544 10566 1 + 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229928.peg.454 CDS AZTR01000015.1 10573 11253 1 + 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229928.peg.455 CDS AZTR01000015.1 11250 12158 3 + 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.229928.peg.456 CDS AZTR01000015.1 13617 12262 -3 - 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229928.peg.457 CDS AZTR01000015.1 15334 13745 -1 - 1590 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229928.peg.458 CDS AZTR01000015.1 15639 15376 -3 - 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229928.peg.459 CDS AZTR01000015.1 15929 15594 -2 - 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229928.peg.460 CDS AZTR01000015.1 16109 15975 -2 - 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.229928.peg.461 CDS AZTR01000015.1 16527 17888 3 + 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229928.peg.462 CDS AZTR01000015.1 17896 18999 1 + 1104 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229928.peg.463 CDS AZTR01000015.1 19003 20079 1 + 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229928.peg.464 CDS AZTR01000015.1 20881 20126 -1 - 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229928.peg.465 CDS AZTR01000015.1 21069 21644 3 + 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229928.peg.466 CDS AZTR01000016.1 938 111 -2 - 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229928.peg.467 CDS AZTR01000016.1 1466 969 -2 - 498 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229928.peg.468 CDS AZTR01000016.1 3540 1459 -3 - 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229928.peg.469 CDS AZTR01000016.1 5664 3541 -3 - 2124 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229928.peg.470 CDS AZTR01000016.1 5976 5710 -3 - 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229928.peg.471 CDS AZTR01000016.1 6672 6034 -3 - 639 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229928.peg.472 CDS AZTR01000016.1 6685 6834 1 + 150 hypothetical protein - none -
fig|6666666.229928.peg.473 CDS AZTR01000016.1 6914 7918 2 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229928.peg.474 CDS AZTR01000016.1 8428 8012 -1 - 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229928.peg.475 CDS AZTR01000016.1 8549 8929 2 + 381 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229928.peg.476 CDS AZTR01000017.1 75 191 3 + 117 UPF0125 protein yfjF - none -
fig|6666666.229928.peg.477 CDS AZTR01000017.1 224 1417 2 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229928.peg.478 CDS AZTR01000017.1 1424 2758 2 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229928.peg.479 CDS AZTR01000017.1 3618 2764 -3 - 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229928.peg.480 CDS AZTR01000017.1 4167 3646 -3 - 522 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229928.peg.481 CDS AZTR01000017.1 4896 4171 -3 - 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB Lipopolysaccharide assembly
fig|6666666.229928.peg.482 CDS AZTR01000017.1 5420 4902 -2 - 519 LptA, protein essential for LPS transport across the periplasm Lipopolysaccharide assembly
fig|6666666.229928.peg.483 CDS AZTR01000017.1 5976 5401 -3 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229928.peg.484 CDS AZTR01000017.1 6260 7057 2 + 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229928.peg.485 CDS AZTR01000017.1 7051 7836 1 + 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229928.peg.486 CDS AZTR01000017.1 7859 8368 2 + 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229928.peg.487 CDS AZTR01000017.1 8397 9038 3 + 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229928.peg.488 CDS AZTR01000017.1 9042 9377 3 + 336 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229928.peg.489 CDS AZTR01000017.1 9377 9634 2 + 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229928.peg.490 CDS AZTR01000017.1 9651 10928 3 + 1278 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229928.peg.491 CDS AZTR01000017.1 11280 10990 -3 - 291 FIG00696346: hypothetical protein - none -
fig|6666666.229928.peg.492 CDS AZTR01000017.1 11483 12913 2 + 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229928.peg.493 CDS AZTR01000017.1 12990 13529 3 + 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229928.peg.494 CDS AZTR01000017.1 13526 14194 2 + 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229928.peg.495 CDS AZTR01000017.1 14259 14984 3 + 726 Integral membrane protein TerC - none -
fig|6666666.229928.peg.496 CDS AZTR01000017.1 16502 15093 -2 - 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229928.peg.497 CDS AZTR01000017.1 16889 18742 2 + 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229928.peg.498 CDS AZTR01000017.1 18852 18739 -3 - 114 hypothetical protein - none -
fig|6666666.229928.peg.499 CDS AZTR01000017.1 18968 21478 2 + 2511 TolA protein Ton and Tol transport systems
fig|6666666.229928.peg.500 CDS AZTR01000017.1 22006 21542 -1 - 465 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229928.peg.501 CDS AZTR01000017.1 22164 23057 3 + 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229928.peg.502 CDS AZTR01000017.1 23170 24174 1 + 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229928.peg.503 CDS AZTR01000017.1 24309 25820 3 + 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229928.peg.504 CDS AZTR01000017.1 26135 26971 2 + 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229928.peg.505 CDS AZTR01000017.1 27719 27024 -2 - 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229928.peg.506 CDS AZTR01000017.1 29100 27712 -3 - 1389 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229928.peg.507 CDS AZTR01000017.1 29239 29370 1 + 132 hypothetical protein - none -
fig|6666666.229928.peg.508 CDS AZTR01000017.1 29459 31906 2 + 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229928.peg.509 CDS AZTR01000017.1 31919 32863 2 + 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229928.peg.510 CDS AZTR01000017.1 32891 33331 2 + 441 hypothetical protein - none -
fig|6666666.229928.peg.511 CDS AZTR01000017.1 33387 34661 3 + 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229928.peg.512 CDS AZTR01000017.1 34720 35439 1 + 720 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229928.peg.513 CDS AZTR01000017.1 35535 36788 3 + 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229928.peg.514 CDS AZTR01000017.1 36788 37675 2 + 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229928.peg.515 CDS AZTR01000017.1 38119 37808 -1 - 312 hypothetical protein - none -
fig|6666666.229928.peg.516 CDS AZTR01000018.1 139 819 1 + 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229928.peg.517 CDS AZTR01000018.1 858 1181 3 + 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229928.peg.518 CDS AZTR01000018.1 1181 2350 2 + 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229928.peg.519 CDS AZTR01000018.1 2449 3105 1 + 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229928.peg.520 CDS AZTR01000018.1 3125 4357 2 + 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229928.peg.521 CDS AZTR01000018.1 4366 4485 1 + 120 hypothetical protein - none -
fig|6666666.229928.peg.522 CDS AZTR01000018.1 4667 5713 2 + 1047 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229928.peg.523 CDS AZTR01000018.1 5903 6886 2 + 984 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229928.peg.524 CDS AZTR01000018.1 6910 9285 1 + 2376 Alpha-glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization
fig|6666666.229928.peg.525 CDS AZTR01000018.1 9300 10055 3 + 756 Hexuronate utilization operon transcriptional repressor ExuR - none -
fig|6666666.229928.peg.526 CDS AZTR01000018.1 10075 11259 1 + 1185 Mannonate dehydratase (EC 4.2.1.8) - none -
fig|6666666.229928.peg.527 CDS AZTR01000018.1 11297 11854 2 + 558 hypothetical protein - none -
fig|6666666.229928.peg.528 CDS AZTR01000018.1 11904 12227 3 + 324 hypothetical protein - none -
fig|6666666.229928.peg.529 CDS AZTR01000018.1 12383 13174 2 + 792 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229928.peg.530 CDS AZTR01000018.1 14954 13200 -2 - 1755 Putative sulfate permease - none -
fig|6666666.229928.peg.531 CDS AZTR01000018.1 15385 17802 1 + 2418 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229928.peg.532 CDS AZTR01000018.1 19714 17864 -1 - 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229928.peg.533 CDS AZTR01000018.1 21547 19790 -1 - 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229928.peg.534 CDS AZTR01000018.1 21884 21669 -2 - 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229928.peg.535 CDS AZTR01000018.1 21919 22086 1 + 168 hypothetical protein - none -
fig|6666666.229928.peg.536 CDS AZTR01000018.1 22109 23137 2 + 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.229928.peg.537 CDS AZTR01000018.1 23202 23435 3 + 234 unknown - none -
fig|6666666.229928.peg.538 CDS AZTR01000018.1 23438 24016 2 + 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229928.peg.539 CDS AZTR01000018.1 26096 24084 -2 - 2013 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229928.peg.540 CDS AZTR01000018.1 27235 26198 -1 - 1038 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229928.peg.541 CDS AZTR01000018.1 27375 28199 3 + 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229928.peg.542 CDS AZTR01000018.1 28300 29247 1 + 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229928.peg.543 CDS AZTR01000018.1 29325 29212 -3 - 114 hypothetical protein - none -
fig|6666666.229928.peg.544 CDS AZTR01000018.1 29613 29467 -3 - 147 hypothetical protein - none -
fig|6666666.229928.peg.545 CDS AZTR01000018.1 30270 29689 -3 - 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229928.peg.546 CDS AZTR01000018.1 31670 30579 -2 - 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229928.peg.547 CDS AZTR01000018.1 32542 31859 -1 - 684 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229928.peg.548 CDS AZTR01000019.1 172 528 1 + 357 DsrE-related protein - none -
fig|6666666.229928.peg.549 CDS AZTR01000019.1 599 4264 2 + 3666 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229928.peg.550 CDS AZTR01000019.1 4264 6243 1 + 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229928.peg.551 CDS AZTR01000019.1 6256 6852 1 + 597 hypothetical protein - none -
fig|6666666.229928.peg.552 CDS AZTR01000019.1 7096 7524 1 + 429 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.229928.peg.553 CDS AZTR01000019.1 7541 7933 2 + 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229928.peg.554 CDS AZTR01000019.1 8097 7978 -3 - 120 hypothetical protein - none -
fig|6666666.229928.peg.555 CDS AZTR01000019.1 8096 8881 2 + 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229928.peg.556 CDS AZTR01000019.1 9040 8894 -1 - 147 StbE replicon stabilization toxin - none -
fig|6666666.229928.peg.557 CDS AZTR01000019.1 9179 9024 -2 - 156 StbE replicon stabilization toxin - none -
fig|6666666.229928.peg.558 CDS AZTR01000019.1 9430 9176 -1 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229928.peg.559 CDS AZTR01000020.1 1578 2357 3 + 780 Protein of unknown function DUF419 - none -
fig|6666666.229928.peg.560 CDS AZTR01000020.1 4895 2415 -2 - 2481 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229928.peg.561 CDS AZTR01000020.1 6056 4956 -2 - 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229928.peg.562 CDS AZTR01000020.1 6362 7819 2 + 1458 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis;
tRNA modification Bacteria;
tRNA modification Bacteria
fig|6666666.229928.peg.563 CDS AZTR01000020.1 8607 7903 -3 - 705 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229928.peg.564 CDS AZTR01000020.1 8790 9782 3 + 993 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229928.peg.565 CDS AZTR01000020.1 10497 9847 -3 - 651 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229928.peg.566 CDS AZTR01000021.1 481 125 -1 - 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229928.peg.567 CDS AZTR01000021.1 2737 506 -1 - 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229928.peg.568 CDS AZTR01000021.1 4063 2747 -1 - 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229928.peg.569 CDS AZTR01000021.1 4751 4065 -2 - 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229928.peg.570 CDS AZTR01000021.1 5896 5048 -1 - 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229928.peg.571 CDS AZTR01000021.1 6773 6051 -2 - 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229928.peg.572 CDS AZTR01000021.1 7237 6848 -1 - 390 Patatin-like phospholipase - none -
fig|6666666.229928.peg.573 CDS AZTR01000021.1 8171 7356 -2 - 816 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229928.peg.574 CDS AZTR01000022.1 903 40 -3 - 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229928.peg.575 CDS AZTR01000022.1 1021 1737 1 + 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229928.peg.576 CDS AZTR01000022.1 1747 2391 1 + 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229928.peg.577 CDS AZTR01000022.1 2473 3348 1 + 876 DnaJ-like protein DjlA - none -
fig|6666666.229928.peg.578 CDS AZTR01000022.1 3352 4356 1 + 1005 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229928.peg.579 CDS AZTR01000022.1 5400 4342 -3 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229928.peg.580 CDS AZTR01000022.1 6936 5416 -3 - 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229928.peg.581 CDS AZTR01000022.1 8015 7017 -2 - 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229928.peg.582 CDS AZTR01000022.1 8575 8234 -1 - 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229928.peg.583 CDS AZTR01000022.1 9373 8606 -1 - 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229928.peg.584 CDS AZTR01000022.1 9539 10729 2 + 1191 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229928.peg.585 CDS AZTR01000022.1 10707 10985 3 + 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229928.peg.586 CDS AZTR01000022.1 10988 12067 2 + 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229928.peg.587 CDS AZTR01000022.1 12462 12587 3 + 126 hypothetical protein - none -
fig|6666666.229928.peg.588 CDS AZTR01000022.1 13161 12568 -3 - 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229928.peg.589 CDS AZTR01000022.1 13259 13576 2 + 318 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229928.peg.590 CDS AZTR01000022.1 13586 13702 2 + 117 hypothetical protein - none -
fig|6666666.229928.peg.591 CDS AZTR01000022.1 13850 13713 -2 - 138 hypothetical protein - none -
fig|6666666.229928.peg.592 CDS AZTR01000022.1 13932 15272 3 + 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229928.peg.593 CDS AZTR01000022.1 15275 16510 2 + 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229928.peg.594 CDS AZTR01000022.1 16503 17288 3 + 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229928.peg.595 CDS AZTR01000022.1 17288 17917 2 + 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229928.peg.596 CDS AZTR01000022.1 17921 18517 2 + 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229928.peg.597 CDS AZTR01000022.1 18529 19764 1 + 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229928.peg.598 CDS AZTR01000022.1 19769 19918 2 + 150 hypothetical protein - none -
fig|6666666.229928.peg.599 CDS AZTR01000022.1 19915 21003 1 + 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229928.peg.600 CDS AZTR01000022.1 21082 21339 1 + 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229928.peg.601 CDS AZTR01000022.1 21600 22751 3 + 1152 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229928.peg.602 CDS AZTR01000022.1 23204 23320 2 + 117 hypothetical protein - none -
fig|6666666.229928.peg.603 CDS AZTR01000022.1 23389 24699 1 + 1311 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.229928.peg.604 CDS AZTR01000022.1 25214 24795 -2 - 420 Putative Holliday junction resolvase YqgF - none -
fig|6666666.229928.peg.605 CDS AZTR01000022.1 25771 25214 -1 - 558 UPF0301 protein YqgE - none -
fig|6666666.229928.peg.606 CDS AZTR01000022.1 26423 25788 -2 - 636 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229928.peg.607 CDS AZTR01000022.1 26521 26652 1 + 132 hypothetical protein - none -
fig|6666666.229928.peg.608 CDS AZTR01000022.1 26830 26609 -1 - 222 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229928.peg.609 CDS AZTR01000023.1 1023 136 -3 - 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229928.peg.610 CDS AZTR01000023.1 2463 1099 -3 - 1365 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229928.peg.611 CDS AZTR01000023.1 2677 2495 -1 - 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229928.peg.612 CDS AZTR01000023.1 5424 2800 -3 - 2625 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229928.peg.613 CDS AZTR01000023.1 6049 5624 -1 - 426 Universal stress protein A Universal stress protein family
fig|6666666.229928.peg.614 CDS AZTR01000023.1 6167 7024 2 + 858 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229928.peg.615 CDS AZTR01000023.1 8111 7122 -2 - 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229928.peg.616 CDS AZTR01000023.1 10109 8370 -2 - 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229928.peg.617 CDS AZTR01000023.1 10338 10114 -3 - 225 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229928.peg.618 CDS AZTR01000023.1 10465 11490 1 + 1026 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229928.peg.619 CDS AZTR01000023.1 11556 11969 3 + 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229928.peg.620 CDS AZTR01000023.1 12011 12706 2 + 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229928.peg.621 CDS AZTR01000023.1 12751 14139 1 + 1389 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229928.peg.622 CDS AZTR01000023.1 15403 14195 -1 - 1209 Sodium/glutamate symport protein - none -
fig|6666666.229928.peg.623 CDS AZTR01000023.1 16003 15569 -1 - 435 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229928.peg.624 CDS AZTR01000023.1 16830 16000 -3 - 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229928.peg.625 CDS AZTR01000023.1 17300 16827 -2 - 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229928.peg.626 CDS AZTR01000023.1 17971 17303 -1 - 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229928.peg.627 CDS AZTR01000023.1 18097 19596 1 + 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.229928.peg.628 CDS AZTR01000023.1 19935 20750 3 + 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229928.peg.629 CDS AZTR01000023.1 21721 20828 -1 - 894 Transcriptional regulator, LysR family - none -
fig|6666666.229928.peg.630 CDS AZTR01000023.1 22080 22925 3 + 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229928.peg.631 CDS AZTR01000023.1 22989 23969 3 + 981 Aldo-keto reductase - none -
fig|6666666.229928.peg.632 CDS AZTR01000023.1 24195 25250 3 + 1056 Carboxylesterase type B - none -
fig|6666666.229928.peg.633 CDS AZTR01000023.1 25518 25850 3 + 333 Carboxylesterase type B - none -
fig|6666666.229928.peg.634 CDS AZTR01000023.1 25987 27096 1 + 1110 Putative exported protein precursor - none -
fig|6666666.229928.peg.635 CDS AZTR01000023.1 28125 27235 -3 - 891 Transcriptional regulator, LysR family - none -
fig|6666666.229928.peg.636 CDS AZTR01000023.1 28195 28314 1 + 120 hypothetical protein - none -
fig|6666666.229928.peg.637 CDS AZTR01000023.1 28327 29289 1 + 963 FIG01220323: hypothetical protein - none -
fig|6666666.229928.peg.638 CDS AZTR01000023.1 31273 29441 -1 - 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229928.peg.639 CDS AZTR01000023.1 32125 31328 -1 - 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229928.peg.640 CDS AZTR01000023.1 32523 32251 -3 - 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229928.peg.641 CDS AZTR01000023.1 33280 32690 -1 - 591 FIG01200173: hypothetical protein - none -
fig|6666666.229928.peg.642 CDS AZTR01000023.1 34362 33298 -3 - 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229928.peg.643 CDS AZTR01000023.1 35160 34375 -3 - 786 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229928.peg.644 CDS AZTR01000023.1 35943 35299 -3 - 645 converved hypothetical protein - none -
fig|6666666.229928.peg.645 CDS AZTR01000023.1 36062 35940 -2 - 123 hypothetical protein - none -
fig|6666666.229928.peg.646 CDS AZTR01000023.1 36201 37817 3 + 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.229928.peg.647 CDS AZTR01000023.1 39429 37882 -3 - 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229928.peg.648 CDS AZTR01000023.1 43313 39432 -2 - 3882 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229928.peg.649 CDS AZTR01000023.1 45200 43341 -2 - 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229928.peg.650 CDS AZTR01000023.1 45896 45267 -2 - 630 Nitrate/nitrite response regulator protein - none -
fig|6666666.229928.peg.651 CDS AZTR01000023.1 48407 45906 -2 - 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229928.peg.652 CDS AZTR01000023.1 48563 49489 2 + 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229928.peg.653 CDS AZTR01000023.1 49502 50248 2 + 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229928.peg.654 CDS AZTR01000023.1 50277 51662 3 + 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229928.peg.655 CDS AZTR01000023.1 51675 52925 3 + 1251 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229928.peg.656 CDS AZTR01000023.1 53729 52992 -2 - 738 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229928.peg.657 CDS AZTR01000023.1 53991 54272 3 + 282 hypothetical protein - none -
fig|6666666.229928.peg.658 CDS AZTR01000023.1 54458 55045 2 + 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229928.peg.659 CDS AZTR01000023.1 55311 55084 -3 - 228 hypothetical protein - none -
fig|6666666.229928.peg.660 CDS AZTR01000023.1 55816 55334 -1 - 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229928.peg.661 CDS AZTR01000023.1 56027 56161 2 + 135 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229928.peg.662 CDS AZTR01000023.1 57150 56551 -3 - 600 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229928.peg.663 CDS AZTR01000023.1 58631 57162 -2 - 1470 Sodium-dependent transporter - none -
fig|6666666.229928.peg.664 CDS AZTR01000023.1 58741 59628 1 + 888 RuBisCO operon transcriptional regulator CO2 uptake, carboxysome
fig|6666666.229928.peg.665 CDS AZTR01000023.1 59845 62160 1 + 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229928.peg.666 CDS AZTR01000023.1 63665 62208 -2 - 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229928.peg.667 CDS AZTR01000023.1 64699 63671 -1 - 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229928.peg.668 CDS AZTR01000023.1 66202 64715 -1 - 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229928.peg.669 CDS AZTR01000023.1 66365 67306 2 + 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229928.peg.670 CDS AZTR01000024.1 502 251 -1 - 252 Transcriptional regulator, XRE family - none -
fig|6666666.229928.peg.671 CDS AZTR01000024.1 653 2290 2 + 1638 NAD-dependent malic enzyme (EC 1.1.1.38) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229928.peg.672 CDS AZTR01000024.1 3709 2510 -1 - 1200 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229928.peg.673 CDS AZTR01000024.1 4755 3706 -3 - 1050 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229928.peg.674 CDS AZTR01000024.1 5282 4752 -2 - 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229928.peg.675 CDS AZTR01000024.1 6699 5275 -3 - 1425 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229928.peg.676 CDS AZTR01000025.1 430 798 1 + 369 hypothetical protein - none -
fig|6666666.229928.peg.677 CDS AZTR01000025.1 874 749 -1 - 126 hypothetical protein - none -
fig|6666666.229928.peg.678 CDS AZTR01000025.1 1960 995 -1 - 966 NrfD protein - none -
fig|6666666.229928.peg.679 CDS AZTR01000025.1 2634 1957 -3 - 678 NrfC protein - none -
fig|6666666.229928.peg.680 CDS AZTR01000025.1 3296 2631 -2 - 666 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229928.peg.681 CDS AZTR01000025.1 4893 3370 -3 - 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229928.peg.682 CDS AZTR01000025.1 5760 5470 -3 - 291 hypothetical protein - none -
fig|6666666.229928.peg.683 CDS AZTR01000025.1 6404 5778 -2 - 627 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229928.peg.684 CDS AZTR01000025.1 7459 6536 -1 - 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229928.peg.685 CDS AZTR01000025.1 7911 7459 -3 - 453 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229928.peg.686 CDS AZTR01000025.1 8555 8010 -2 - 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229928.peg.687 CDS AZTR01000025.1 10542 8584 -3 - 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229928.peg.688 CDS AZTR01000025.1 11060 10542 -2 - 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229928.peg.689 CDS AZTR01000025.1 11263 11057 -1 - 207 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229928.peg.690 CDS AZTR01000025.1 12018 11281 -3 - 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229928.peg.691 CDS AZTR01000025.1 12694 12029 -1 - 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229928.peg.692 CDS AZTR01000025.1 13334 12699 -2 - 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229928.peg.693 CDS AZTR01000025.1 14291 13506 -2 - 786 Bicyclomycin resistance protein - none -
fig|6666666.229928.peg.694 CDS AZTR01000025.1 14698 14288 -1 - 411 Bicyclomycin resistance protein - none -
fig|6666666.229928.peg.695 CDS AZTR01000025.1 15404 14703 -2 - 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229928.peg.696 CDS AZTR01000025.1 15446 15628 2 + 183 hypothetical protein - none -
fig|6666666.229928.peg.697 CDS AZTR01000025.1 15621 17885 3 + 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229928.peg.698 CDS AZTR01000025.1 18030 18674 3 + 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229928.peg.699 CDS AZTR01000025.1 19085 19876 2 + 792 putative lipoprotein - none -
fig|6666666.229928.peg.700 CDS AZTR01000025.1 20905 20078 -1 - 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229928.peg.701 CDS AZTR01000025.1 21045 21488 3 + 444 FIG00904084: hypothetical protein - none -
fig|6666666.229928.peg.702 CDS AZTR01000025.1 22174 21578 -1 - 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.703 CDS AZTR01000025.1 22271 22624 2 + 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229928.peg.704 CDS AZTR01000025.1 22645 24075 1 + 1431 Transglycosylase, Slt family - none -
fig|6666666.229928.peg.705 CDS AZTR01000025.1 24086 24232 2 + 147 hypothetical protein - none -
fig|6666666.229928.peg.706 CDS AZTR01000025.1 24814 24275 -1 - 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229928.peg.707 CDS AZTR01000025.1 26382 24838 -3 - 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229928.peg.708 CDS AZTR01000025.1 26577 27308 3 + 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229928.peg.709 CDS AZTR01000025.1 28643 27429 -2 - 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229928.peg.710 CDS AZTR01000025.1 28760 30064 2 + 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229928.peg.711 CDS AZTR01000025.1 30055 31761 1 + 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229928.peg.712 CDS AZTR01000025.1 31814 32563 2 + 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229928.peg.713 CDS AZTR01000025.1 32659 32928 1 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229928.peg.714 CDS AZTR01000025.1 33136 34290 1 + 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229928.peg.715 CDS AZTR01000025.1 34359 34859 3 + 501 Protein sprT - none -
fig|6666666.229928.peg.716 CDS AZTR01000025.1 35016 36257 3 + 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229928.peg.717 CDS AZTR01000025.1 36350 37714 2 + 1365 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229928.peg.718 CDS AZTR01000025.1 38944 37895 -1 - 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229928.peg.719 CDS AZTR01000025.1 39239 40378 2 + 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229928.peg.720 CDS AZTR01000025.1 40400 40951 2 + 552 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229928.peg.721 CDS AZTR01000025.1 41095 42150 1 + 1056 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229928.peg.722 CDS AZTR01000025.1 42162 43265 3 + 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229928.peg.723 CDS AZTR01000025.1 43287 44564 3 + 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229928.peg.724 CDS AZTR01000025.1 44575 45189 1 + 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229928.peg.725 CDS AZTR01000025.1 45242 45694 2 + 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229928.peg.726 CDS AZTR01000025.1 46377 45700 -3 - 678 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229928.peg.727 CDS AZTR01000025.1 46390 46527 1 + 138 hypothetical protein - none -
fig|6666666.229928.peg.728 CDS AZTR01000025.1 47777 46524 -2 - 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229928.peg.729 CDS AZTR01000025.1 48527 47901 -2 - 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229928.peg.730 CDS AZTR01000025.1 50509 48662 -1 - 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229928.peg.731 CDS AZTR01000025.1 52915 50642 -1 - 2274 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229928.peg.732 CDS AZTR01000025.1 53043 52912 -3 - 132 hypothetical protein - none -
fig|6666666.229928.peg.733 CDS AZTR01000025.1 53147 54748 2 + 1602 Dca - none -
fig|6666666.229928.peg.734 CDS AZTR01000025.1 55005 55571 3 + 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229928.peg.735 CDS AZTR01000025.1 55581 56822 3 + 1242 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229928.peg.736 CDS AZTR01000025.1 57208 56885 -1 - 324 FIG074102: hypothetical protein - none -
fig|6666666.229928.peg.737 CDS AZTR01000025.1 57365 57201 -2 - 165 Phage-related protein - none -
fig|6666666.229928.peg.738 CDS AZTR01000025.1 58513 57668 -1 - 846 membrane protein, putative - none -
fig|6666666.229928.peg.739 CDS AZTR01000025.1 60745 58586 -1 - 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229928.peg.740 CDS AZTR01000025.1 61044 60832 -3 - 213 Copper chaperone Copper homeostasis
fig|6666666.229928.peg.741 CDS AZTR01000025.1 61139 61525 2 + 387 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229928.peg.742 CDS AZTR01000025.1 61796 62878 2 + 1083 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229928.peg.743 CDS AZTR01000025.1 62892 63113 3 + 222 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229928.peg.744 CDS AZTR01000025.1 64277 63441 -2 - 837 COG1720: Uncharacterized conserved protein tRNA modification Bacteria
fig|6666666.229928.peg.745 CDS AZTR01000025.1 64390 65310 1 + 921 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229928.peg.746 CDS AZTR01000025.1 65361 65861 3 + 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229928.peg.747 CDS AZTR01000025.1 65882 66046 2 + 165 hypothetical protein - none -
fig|6666666.229928.peg.748 CDS AZTR01000025.1 66051 67016 3 + 966 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229928.peg.749 CDS AZTR01000025.1 67523 66990 -2 - 534 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229928.peg.750 CDS AZTR01000025.1 67644 69005 3 + 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229928.peg.751 CDS AZTR01000025.1 69244 69783 1 + 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229928.peg.752 CDS AZTR01000025.1 70992 69853 -3 - 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229928.peg.753 CDS AZTR01000025.1 72263 70989 -2 - 1275 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229928.peg.754 CDS AZTR01000025.1 73498 72395 -1 - 1104 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229928.peg.755 CDS AZTR01000025.1 73803 74414 3 + 612 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229928.peg.756 CDS AZTR01000025.1 76300 74498 -1 - 1803 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229928.peg.757 CDS AZTR01000025.1 77314 76412 -1 - 903 Lipoprotein nlpI precursor - none -
fig|6666666.229928.peg.758 CDS AZTR01000025.1 79630 77399 -1 - 2232 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229928.peg.759 CDS AZTR01000025.1 79822 80292 1 + 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229928.peg.760 CDS AZTR01000025.1 81419 80766 -2 - 654 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229928.peg.761 CDS AZTR01000025.1 81442 81894 1 + 453 Type IV pilin PilA Type IV pilus
fig|6666666.229928.peg.762 CDS AZTR01000025.1 81921 83330 3 + 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229928.peg.763 CDS AZTR01000025.1 83323 84546 1 + 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229928.peg.764 CDS AZTR01000025.1 84546 85232 3 + 687 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229928.peg.765 CDS AZTR01000025.1 85282 85905 1 + 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229928.peg.766 CDS AZTR01000025.1 85895 86107 2 + 213 FIG003276: zinc-binding protein - none -
fig|6666666.229928.peg.767 CDS AZTR01000025.1 86107 86379 1 + 273 FIG00904058: hypothetical protein - none -
fig|6666666.229928.peg.768 CDS AZTR01000025.1 86776 88149 1 + 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229928.peg.769 CDS AZTR01000025.1 88378 88701 1 + 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229928.peg.770 CDS AZTR01000025.1 89156 89404 2 + 249 unknown - none -
fig|6666666.229928.peg.771 CDS AZTR01000025.1 90319 90020 -1 - 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229928.peg.772 CDS AZTR01000025.1 91362 90313 -3 - 1050 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229928.peg.773 CDS AZTR01000025.1 92491 91607 -1 - 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229928.peg.774 CDS AZTR01000025.1 93055 92504 -1 - 552 Protein involved in cell division - none -
fig|6666666.229928.peg.775 CDS AZTR01000025.1 94501 93065 -1 - 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229928.peg.776 CDS AZTR01000025.1 94770 94498 -3 - 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229928.peg.777 CDS AZTR01000025.1 96182 94794 -2 - 1389 FOG: TPR repeat - none -
fig|6666666.229928.peg.778 CDS AZTR01000025.1 97065 96301 -3 - 765 Periplasmic protein TonB, links inner and outer membranes - none -
fig|6666666.229928.peg.779 CDS AZTR01000025.1 97254 97120 -3 - 135 hypothetical protein - none -
fig|6666666.229928.peg.780 CDS AZTR01000025.1 98709 97363 -3 - 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229928.peg.781 CDS AZTR01000025.1 99219 98752 -3 - 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229928.peg.782 CDS AZTR01000025.1 99236 99388 2 + 153 hypothetical protein - none -
fig|6666666.229928.peg.783 CDS AZTR01000025.1 99819 99343 -3 - 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229928.peg.784 CDS AZTR01000025.1 100919 99918 -2 - 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229928.peg.785 CDS AZTR01000025.1 101229 100900 -3 - 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229928.peg.786 CDS AZTR01000025.1 101630 101211 -2 - 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229928.peg.787 CDS AZTR01000025.1 102527 101670 -2 - 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229928.peg.788 CDS AZTR01000025.1 103406 102639 -2 - 768 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229928.peg.789 CDS AZTR01000025.1 103579 104022 1 + 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229928.peg.790 CDS AZTR01000025.1 105463 104096 -1 - 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229928.peg.791 CDS AZTR01000025.1 105916 105482 -1 - 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229928.peg.792 CDS AZTR01000025.1 106489 105929 -1 - 561 Protein of unknown function DUF414 - none -
fig|6666666.229928.peg.793 CDS AZTR01000025.1 107117 106590 -2 - 528 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229928.peg.794 CDS AZTR01000025.1 108294 107443 -3 - 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229928.peg.795 CDS AZTR01000025.1 109088 108291 -2 - 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229928.peg.796 CDS AZTR01000025.1 109894 109097 -1 - 798 Protein of unknown function DUF81 - none -
fig|6666666.229928.peg.797 CDS AZTR01000025.1 110496 109897 -3 - 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229928.peg.798 CDS AZTR01000025.1 110716 111135 1 + 420 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229928.peg.799 CDS AZTR01000025.1 111146 112654 2 + 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229928.peg.800 CDS AZTR01000025.1 112651 113547 1 + 897 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229928.peg.801 CDS AZTR01000025.1 113637 114518 3 + 882 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229928.peg.802 CDS AZTR01000025.1 114518 114649 2 + 132 hypothetical protein - none -
fig|6666666.229928.peg.803 CDS AZTR01000025.1 114601 115533 1 + 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229928.peg.804 CDS AZTR01000025.1 115840 115631 -1 - 210 Cold shock protein CspG Cold shock, CspA family of proteins
fig|6666666.229928.peg.805 CDS AZTR01000025.1 117732 116296 -3 - 1437 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229928.peg.806 CDS AZTR01000025.1 118420 119208 1 + 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229928.peg.807 CDS AZTR01000025.1 119321 120697 2 + 1377 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229928.peg.808 CDS AZTR01000025.1 120998 122347 2 + 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229928.peg.809 CDS AZTR01000025.1 122836 124290 1 + 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229928.peg.810 CDS AZTR01000025.1 125121 124963 -3 - 159 hypothetical protein - none -
fig|6666666.229928.peg.811 CDS AZTR01000025.1 128895 125419 -3 - 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229928.peg.812 CDS AZTR01000025.1 128860 129039 1 + 180 hypothetical protein - none -
fig|6666666.229928.peg.813 CDS AZTR01000025.1 129094 130881 1 + 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229928.peg.814 CDS AZTR01000025.1 130898 131014 2 + 117 hypothetical protein - none -
fig|6666666.229928.peg.815 CDS AZTR01000025.1 131764 137127 1 + 5364 Autotransporter adhesin - none -
fig|6666666.229928.peg.816 CDS AZTR01000026.1 57 2183 3 + 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229928.peg.817 CDS AZTR01000026.1 2364 2483 3 + 120 hypothetical protein - none -
fig|6666666.229928.peg.818 CDS AZTR01000026.1 2751 2626 -3 - 126 hypothetical protein - none -
fig|6666666.229928.peg.819 CDS AZTR01000026.1 2785 3252 1 + 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229928.peg.820 CDS AZTR01000026.1 4067 3279 -2 - 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229928.peg.821 CDS AZTR01000026.1 4351 4070 -1 - 282 hypothetical protein - none -
fig|6666666.229928.peg.822 CDS AZTR01000026.1 4499 4344 -2 - 156 hypothetical protein - none -
fig|6666666.229928.peg.823 CDS AZTR01000026.1 5105 4593 -2 - 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229928.peg.824 CDS AZTR01000026.1 5175 6584 3 + 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229928.peg.825 CDS AZTR01000026.1 7694 6732 -2 - 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229928.peg.826 CDS AZTR01000026.1 8397 7759 -3 - 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229928.peg.827 CDS AZTR01000026.1 8742 8443 -3 - 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229928.peg.828 CDS AZTR01000026.1 10005 8815 -3 - 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229928.peg.829 CDS AZTR01000026.1 10893 10036 -3 - 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229928.peg.830 CDS AZTR01000026.1 12063 10942 -3 - 1122 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229928.peg.831 CDS AZTR01000026.1 14011 12050 -1 - 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229928.peg.832 CDS AZTR01000026.1 14560 14024 -1 - 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229928.peg.833 CDS AZTR01000026.1 14859 14551 -3 - 309 Iojap protein - none -
fig|6666666.229928.peg.834 CDS AZTR01000026.1 16182 14926 -3 - 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229928.peg.835 CDS AZTR01000026.1 16507 17745 1 + 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229928.peg.836 CDS AZTR01000026.1 19105 17870 -1 - 1236 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229928.peg.837 CDS AZTR01000026.1 19192 19305 1 + 114 hypothetical protein - none -
fig|6666666.229928.peg.838 CDS AZTR01000026.1 19570 19340 -1 - 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.839 CDS AZTR01000026.1 20572 19844 -1 - 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229928.peg.840 CDS AZTR01000026.1 21535 20597 -1 - 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229928.peg.841 CDS AZTR01000026.1 22592 21642 -2 - 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229928.peg.842 CDS AZTR01000026.1 23658 22639 -3 - 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.843 CDS AZTR01000026.1 23855 23685 -2 - 171 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.229928.peg.844 CDS AZTR01000026.1 24396 23872 -3 - 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229928.peg.845 CDS AZTR01000026.1 24995 24468 -2 - 528 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229928.peg.846 CDS AZTR01000026.1 25844 25104 -2 - 741 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229928.peg.847 CDS AZTR01000026.1 26512 25862 -1 - 651 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229928.peg.848 CDS AZTR01000026.1 27668 26493 -2 - 1176 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229928.peg.849 CDS AZTR01000026.1 28791 27661 -3 - 1131 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229928.peg.850 CDS AZTR01000026.1 28949 28755 -2 - 195 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229928.peg.851 CDS AZTR01000026.1 29172 30041 3 + 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.852 CDS AZTR01000026.1 30067 30699 1 + 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229928.peg.853 CDS AZTR01000026.1 31005 30763 -3 - 243 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229928.peg.854 CDS AZTR01000026.1 31499 30999 -2 - 501 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229928.peg.855 CDS AZTR01000026.1 31677 31501 -3 - 177 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229928.peg.856 CDS AZTR01000026.1 31735 32520 1 + 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229928.peg.857 CDS AZTR01000026.1 32522 32986 2 + 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229928.peg.858 CDS AZTR01000026.1 33026 33511 2 + 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229928.peg.859 CDS AZTR01000026.1 34941 33631 -3 - 1311 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229928.peg.860 CDS AZTR01000026.1 34895 35035 2 + 141 hypothetical protein - none -
fig|6666666.229928.peg.861 CDS AZTR01000026.1 35556 35032 -3 - 525 FIG00696143: hypothetical protein - none -
fig|6666666.229928.peg.862 CDS AZTR01000026.1 36370 35588 -1 - 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229928.peg.863 CDS AZTR01000026.1 37357 36374 -1 - 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229928.peg.864 CDS AZTR01000026.1 37986 37354 -3 - 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229928.peg.865 CDS AZTR01000026.1 39031 37988 -1 - 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229928.peg.866 CDS AZTR01000026.1 39508 39170 -1 - 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229928.peg.867 CDS AZTR01000026.1 40342 39584 -1 - 759 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229928.peg.868 CDS AZTR01000026.1 40619 41440 2 + 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229928.peg.869 CDS AZTR01000026.1 41443 42687 1 + 1245 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) - none -
fig|6666666.229928.peg.870 CDS AZTR01000026.1 42684 43316 3 + 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229928.peg.871 CDS AZTR01000026.1 43319 44095 2 + 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229928.peg.872 CDS AZTR01000026.1 44184 45536 3 + 1353 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229928.peg.873 CDS AZTR01000026.1 45561 46901 3 + 1341 FIG00782214: hypothetical protein - none -
fig|6666666.229928.peg.874 CDS AZTR01000026.1 46919 47611 2 + 693 Metal-dependent hydrolase - none -
fig|6666666.229928.peg.875 CDS AZTR01000026.1 47659 49455 1 + 1797 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229928.peg.876 CDS AZTR01000026.1 49651 50469 1 + 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229928.peg.877 CDS AZTR01000026.1 53275 50675 -1 - 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229928.peg.878 CDS AZTR01000026.1 54406 53360 -1 - 1047 hypothetical protein - none -
fig|6666666.229928.peg.879 CDS AZTR01000026.1 55351 54593 -1 - 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229928.peg.880 CDS AZTR01000026.1 56450 55353 -2 - 1098 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) - none -
fig|6666666.229928.peg.881 CDS AZTR01000026.1 56849 56520 -2 - 330 Protein yifE - none -
fig|6666666.229928.peg.882 CDS AZTR01000026.1 57526 56909 -1 - 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229928.peg.883 CDS AZTR01000026.1 57811 57545 -1 - 267 Protein yihD - none -
fig|6666666.229928.peg.884 CDS AZTR01000026.1 57895 58479 1 + 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229928.peg.885 CDS AZTR01000026.1 58578 59108 3 + 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229928.peg.886 CDS AZTR01000026.1 59220 60749 3 + 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229928.peg.887 CDS AZTR01000026.1 60752 61693 2 + 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229928.peg.888 CDS AZTR01000026.1 61698 63362 3 + 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229928.peg.889 CDS AZTR01000026.1 63384 63662 3 + 279 hypothetical protein - none -
fig|6666666.229928.peg.890 CDS AZTR01000026.1 63697 63828 1 + 132 hypothetical protein - none -
fig|6666666.229928.peg.891 CDS AZTR01000026.1 64026 63880 -3 - 147 hypothetical protein - none -
fig|6666666.229928.peg.892 CDS AZTR01000026.1 64379 64047 -2 - 333 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229928.peg.893 CDS AZTR01000026.1 64394 64945 2 + 552 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229928.peg.894 CDS AZTR01000026.1 65027 65365 2 + 339 hypothetical protein - none -
fig|6666666.229928.peg.895 CDS AZTR01000026.1 65511 66215 3 + 705 hypothetical protein - none -
fig|6666666.229928.peg.896 CDS AZTR01000026.1 66657 67067 3 + 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229928.peg.897 CDS AZTR01000026.1 67069 67620 1 + 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229928.peg.898 CDS AZTR01000026.1 67776 68204 3 + 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229928.peg.899 CDS AZTR01000026.1 68209 68898 1 + 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229928.peg.900 CDS AZTR01000026.1 68913 69089 3 + 177 hypothetical protein - none -
fig|6666666.229928.peg.901 CDS AZTR01000026.1 69260 69751 2 + 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229928.peg.902 CDS AZTR01000026.1 69803 70174 2 + 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229928.peg.903 CDS AZTR01000026.1 70445 74473 2 + 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229928.peg.904 CDS AZTR01000026.1 74578 78846 1 + 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229928.peg.905 CDS AZTR01000027.1 1557 328 -3 - 1230 Tyrosine-specific transport protein - none -
fig|6666666.229928.peg.906 CDS AZTR01000027.1 2371 1688 -1 - 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229928.peg.907 CDS AZTR01000027.1 3658 2387 -1 - 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229928.peg.908 CDS AZTR01000027.1 4160 3978 -2 - 183 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229928.peg.909 CDS AZTR01000027.1 4311 4466 3 + 156 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229928.peg.910 CDS AZTR01000027.1 4460 4582 2 + 123 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229928.peg.911 CDS AZTR01000027.1 4613 4828 2 + 216 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229928.peg.912 CDS AZTR01000027.1 4847 6310 2 + 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229928.peg.913 CDS AZTR01000027.1 6310 6822 1 + 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis;
Transport system clustering with HemG
fig|6666666.229928.peg.914 CDS AZTR01000028.1 51 1199 3 + 1149 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229928.peg.915 CDS AZTR01000028.1 1488 1222 -3 - 267 FIG00697940: hypothetical protein - none -
fig|6666666.229928.peg.916 CDS AZTR01000028.1 1609 2403 1 + 795 possible DNA-binding protein - none -
fig|6666666.229928.peg.917 CDS AZTR01000029.1 516 64 -3 - 453 putative membrane protein - none -
fig|6666666.229928.peg.918 CDS AZTR01000029.1 970 641 -1 - 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229928.peg.919 CDS AZTR01000029.1 2352 1312 -3 - 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229928.peg.920 CDS AZTR01000029.1 2838 5891 3 + 3054 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229928.peg.921 CDS AZTR01000029.1 5901 6323 3 + 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229928.peg.922 CDS AZTR01000029.1 6316 7380 1 + 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229928.peg.923 CDS AZTR01000029.1 7421 7921 2 + 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229928.peg.924 CDS AZTR01000029.1 9271 8126 -1 - 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229928.peg.925 CDS AZTR01000029.1 10130 9327 -2 - 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229928.peg.926 CDS AZTR01000029.1 11163 10285 -3 - 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229928.peg.927 CDS AZTR01000029.1 12042 11173 -3 - 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229928.peg.928 CDS AZTR01000029.1 12939 12052 -3 - 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229928.peg.929 CDS AZTR01000029.1 13654 12953 -1 - 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229928.peg.930 CDS AZTR01000029.1 13895 14881 2 + 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229928.peg.931 CDS AZTR01000029.1 14945 16795 2 + 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229928.peg.932 CDS AZTR01000029.1 16934 18064 2 + 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229928.peg.933 CDS AZTR01000029.1 18314 19780 2 + 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229928.peg.934 CDS AZTR01000029.1 21526 20456 -1 - 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229928.peg.935 CDS AZTR01000029.1 23795 21753 -2 - 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229928.peg.936 CDS AZTR01000029.1 25438 24407 -1 - 1032 putative membrane protein - none -
fig|6666666.229928.peg.937 CDS AZTR01000029.1 26118 25453 -3 - 666 putative exported protein - none -
fig|6666666.229928.peg.938 CDS AZTR01000029.1 26521 28167 1 + 1647 ABC transporter ATP-binding protein - none -
fig|6666666.229928.peg.939 CDS AZTR01000029.1 29158 28271 -1 - 888 putative adhesin/invasin - none -
fig|6666666.229928.peg.940 CDS AZTR01000029.1 29661 31559 3 + 1899 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229928.peg.941 CDS AZTR01000029.1 31916 32092 2 + 177 hypothetical protein - none -
fig|6666666.229928.peg.942 CDS AZTR01000029.1 32100 34355 3 + 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229928.peg.943 CDS AZTR01000029.1 34639 35250 1 + 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229928.peg.944 CDS AZTR01000029.1 36011 35301 -2 - 711 hypothetical protein - none -
fig|6666666.229928.peg.945 CDS AZTR01000029.1 36694 36017 -1 - 678 FIG00904286: hypothetical protein - none -
fig|6666666.229928.peg.946 CDS AZTR01000029.1 36835 37188 1 + 354 Bona fide RidA/YjgF/TdcF/RutC subgroup - none -
fig|6666666.229928.peg.947 CDS AZTR01000029.1 38103 37258 -3 - 846 hypothetical protein - none -
fig|6666666.229928.peg.948 CDS AZTR01000030.1 400 80 -1 - 321 hypothetical protein - none -
fig|6666666.229928.peg.949 CDS AZTR01000030.1 1308 538 -3 - 771 Glycosyltransferase - none -
fig|6666666.229928.peg.950 CDS AZTR01000030.1 2524 1634 -1 - 891 hypothetical protein - none -
fig|6666666.229928.peg.951 CDS AZTR01000030.1 4572 2527 -3 - 2046 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229928.peg.952 CDS AZTR01000030.1 5216 4605 -2 - 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229928.peg.953 CDS AZTR01000030.1 6194 5238 -2 - 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229928.peg.954 CDS AZTR01000030.1 7077 6310 -3 - 768 Putative membrane protein YfcA - none -
fig|6666666.229928.peg.955 CDS AZTR01000030.1 7953 7081 -3 - 873 Murein endopeptidase - none -
fig|6666666.229928.peg.956 CDS AZTR01000030.1 9048 7975 -3 - 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229928.peg.957 CDS AZTR01000030.1 10746 9070 -3 - 1677 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229928.peg.958 CDS AZTR01000031.1 2907 1492 -3 - 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229928.peg.959 CDS AZTR01000031.1 3530 2913 -2 - 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229928.peg.960 CDS AZTR01000031.1 3617 4417 2 + 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229928.peg.961 CDS AZTR01000031.1 4849 5373 1 + 525 Flavodoxin 1 Flavodoxin
fig|6666666.229928.peg.962 CDS AZTR01000031.1 5392 5832 1 + 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229928.peg.963 CDS AZTR01000031.1 6000 8663 3 + 2664 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229928.peg.964 CDS AZTR01000031.1 8731 9081 1 + 351 FIG00782386: hypothetical protein - none -
fig|6666666.229928.peg.965 CDS AZTR01000031.1 9432 9115 -3 - 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229928.peg.966 CDS AZTR01000031.1 10130 9438 -2 - 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229928.peg.967 CDS AZTR01000031.1 11350 10160 -1 - 1191 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229928.peg.968 CDS AZTR01000031.1 11646 11350 -3 - 297 Inner membrane protein yciS - none -
fig|6666666.229928.peg.969 CDS AZTR01000031.1 12032 11745 -2 - 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229928.peg.970 CDS AZTR01000031.1 13740 12094 -3 - 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229928.peg.971 CDS AZTR01000031.1 14515 13838 -1 - 678 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229928.peg.972 CDS AZTR01000031.1 15401 14508 -2 - 894 Membrane protein LAPB - none -
fig|6666666.229928.peg.973 CDS AZTR01000031.1 15694 18060 1 + 2367 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229928.peg.974 CDS AZTR01000031.1 18138 20912 3 + 2775 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229928.peg.975 CDS AZTR01000031.1 21311 20979 -2 - 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229928.peg.976 CDS AZTR01000031.1 21923 21312 -2 - 612 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229928.peg.977 CDS AZTR01000031.1 22039 21920 -1 - 120 hypothetical protein - none -
fig|6666666.229928.peg.978 CDS AZTR01000031.1 22976 22044 -2 - 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229928.peg.979 CDS AZTR01000031.1 23276 25549 2 + 2274 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229928.peg.980 CDS AZTR01000031.1 27827 25980 -2 - 1848 helicase (Snf2/Rad54 family) - none -
fig|6666666.229928.peg.981 CDS AZTR01000031.1 28223 28044 -2 - 180 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229928.peg.982 CDS AZTR01000031.1 28620 28766 3 + 147 hypothetical protein - none -
fig|6666666.229928.peg.983 CDS AZTR01000031.1 28777 29439 1 + 663 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229928.peg.984 CDS AZTR01000031.1 29525 29854 2 + 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) CBSS-326442.4.peg.1852;
Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229928.peg.985 CDS AZTR01000031.1 29952 30833 3 + 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229928.peg.986 CDS AZTR01000031.1 30833 31723 2 + 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229928.peg.987 CDS AZTR01000031.1 31723 32580 1 + 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229928.peg.988 CDS AZTR01000031.1 32577 33425 3 + 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229928.peg.989 CDS AZTR01000031.1 33672 33400 -3 - 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229928.peg.990 CDS AZTR01000031.1 33817 34491 1 + 675 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229928.peg.991 CDS AZTR01000031.1 34554 35012 3 + 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229928.peg.992 CDS AZTR01000031.1 35012 35485 2 + 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229928.peg.993 CDS AZTR01000031.1 35494 37635 1 + 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229928.peg.994 CDS AZTR01000031.1 38138 37632 -2 - 507 FIG001674: hypothetical protein - none -
fig|6666666.229928.peg.995 CDS AZTR01000031.1 38201 39151 2 + 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p - none -
fig|6666666.229928.peg.996 CDS AZTR01000031.1 40262 39318 -2 - 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229928.peg.997 CDS AZTR01000031.1 41076 40252 -3 - 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229928.peg.998 CDS AZTR01000031.1 42294 41086 -3 - 1209 FIG00732228: membrane protein - none -
fig|6666666.229928.peg.999 CDS AZTR01000031.1 42440 42303 -2 - 138 FIG00732228: membrane protein - none -
fig|6666666.229928.peg.1000 CDS AZTR01000031.1 42726 42457 -3 - 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229928.peg.1001 CDS AZTR01000031.1 43954 42956 -1 - 999 FIG00781545: hypothetical protein - none -
fig|6666666.229928.peg.1002 CDS AZTR01000031.1 45357 44215 -3 - 1143 ABC transporter ATP-binding protein - none -
fig|6666666.229928.peg.1003 CDS AZTR01000032.1 2170 818 -1 - 1353 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.229928.peg.1004 CDS AZTR01000032.1 2864 2172 -2 - 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229928.peg.1005 CDS AZTR01000032.1 3223 2864 -1 - 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229928.peg.1006 CDS AZTR01000032.1 3693 4193 3 + 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229928.peg.1007 CDS AZTR01000032.1 4199 5395 2 + 1197 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229928.peg.1008 CDS AZTR01000032.1 5392 5772 1 + 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229928.peg.1009 CDS AZTR01000032.1 7246 5816 -1 - 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229928.peg.1010 CDS AZTR01000032.1 7360 8295 1 + 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229928.peg.1011 CDS AZTR01000032.1 8916 8353 -3 - 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229928.peg.1012 CDS AZTR01000032.1 9527 8916 -2 - 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229928.peg.1013 CDS AZTR01000032.1 9982 9536 -1 - 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229928.peg.1014 CDS AZTR01000032.1 10932 10006 -3 - 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229928.peg.1015 CDS AZTR01000032.1 12275 11454 -2 - 822 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229928.peg.1016 CDS AZTR01000033.1 755 225 -2 - 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229928.peg.1017 CDS AZTR01000033.1 2682 898 -3 - 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229928.peg.1018 CDS AZTR01000033.1 2829 3275 3 + 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229928.peg.1019 CDS AZTR01000033.1 3550 3341 -1 - 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229928.peg.1020 CDS AZTR01000033.1 3905 3741 -2 - 165 hypothetical protein - none -
fig|6666666.229928.peg.1021 CDS AZTR01000033.1 4672 3959 -1 - 714 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229928.peg.1022 CDS AZTR01000033.1 4983 4669 -3 - 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229928.peg.1023 CDS AZTR01000033.1 5078 5872 2 + 795 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229928.peg.1024 CDS AZTR01000033.1 5881 6720 1 + 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229928.peg.1025 CDS AZTR01000033.1 7862 6768 -2 - 1095 Phosphoglycerate transport system transcriptional regulatory protein PgtA Phosphoglycerate transport system
fig|6666666.229928.peg.1026 CDS AZTR01000033.1 8814 8011 -3 - 804 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229928.peg.1027 CDS AZTR01000034.1 146 730 2 + 585 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229928.peg.1028 CDS AZTR01000034.1 1272 1421 3 + 150 Integral membrane protein - none -
fig|6666666.229928.peg.1029 CDS AZTR01000034.1 1468 1665 1 + 198 hypothetical protein - none -
fig|6666666.229928.peg.1030 CDS AZTR01000034.1 2674 1637 -1 - 1038 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229928.peg.1031 CDS AZTR01000034.1 4274 2856 -2 - 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229928.peg.1032 CDS AZTR01000034.1 4504 4986 1 + 483 FxsA protein - none -
fig|6666666.229928.peg.1033 CDS AZTR01000034.1 5073 5363 3 + 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229928.peg.1034 CDS AZTR01000034.1 5484 7127 3 + 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229928.peg.1035 CDS AZTR01000034.1 8073 7216 -3 - 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.229928.peg.1036 CDS AZTR01000035.1 42 1184 3 + 1143 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229928.peg.1037 CDS AZTR01000036.1 1615 542 -1 - 1074 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.229928.peg.1038 CDS AZTR01000036.1 1744 3027 1 + 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229928.peg.1039 CDS AZTR01000036.1 4932 3103 -3 - 1830 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229928.peg.1040 CDS AZTR01000037.1 1471 671 -1 - 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229928.peg.1041 CDS AZTR01000037.1 1605 1946 3 + 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229928.peg.1042 CDS AZTR01000037.1 1948 2160 1 + 213 hypothetical protein - none -
fig|6666666.229928.peg.1043 CDS AZTR01000037.1 2206 4599 1 + 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229928.peg.1044 CDS AZTR01000037.1 4898 6805 2 + 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229928.peg.1045 CDS AZTR01000037.1 6848 7369 2 + 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229928.peg.1046 CDS AZTR01000037.1 7508 8938 2 + 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229928.peg.1047 CDS AZTR01000037.1 8941 10266 1 + 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229928.peg.1048 CDS AZTR01000037.1 10277 11392 2 + 1116 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229928.peg.1049 CDS AZTR01000037.1 11394 12065 3 + 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229928.peg.1050 CDS AZTR01000037.1 12055 12546 1 + 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229928.peg.1051 CDS AZTR01000037.1 12553 12864 1 + 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229928.peg.1052 CDS AZTR01000037.1 13192 13857 1 + 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229928.peg.1053 CDS AZTR01000037.1 14021 13863 -2 - 159 hypothetical protein - none -
fig|6666666.229928.peg.1054 CDS AZTR01000037.1 15197 14049 -2 - 1149 Mobile element protein - none -
fig|6666666.229928.peg.1055 CDS AZTR01000037.1 16350 15298 -3 - 1053 putative inner membrane protein - none -
fig|6666666.229928.peg.1056 CDS AZTR01000038.1 274 1815 1 + 1542 Esterase/lipase - none -
fig|6666666.229928.peg.1057 CDS AZTR01000038.1 3461 2088 -2 - 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229928.peg.1058 CDS AZTR01000039.1 1286 1999 2 + 714 SanA protein - none -
fig|6666666.229928.peg.1059 CDS AZTR01000039.1 2969 1983 -2 - 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229928.peg.1060 CDS AZTR01000039.1 3804 4061 3 + 258 FIG00699498: hypothetical protein - none -
fig|6666666.229928.peg.1061 CDS AZTR01000039.1 4216 4097 -1 - 120 FIG00697497: hypothetical protein - none -
fig|6666666.229928.peg.1062 CDS AZTR01000039.1 5715 5233 -3 - 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229928.peg.1063 CDS AZTR01000039.1 6371 5730 -2 - 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229928.peg.1064 CDS AZTR01000039.1 7445 6375 -2 - 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229928.peg.1065 CDS AZTR01000039.1 7661 8353 2 + 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229928.peg.1066 CDS AZTR01000039.1 9046 8459 -1 - 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229928.peg.1067 CDS AZTR01000039.1 9695 9111 -2 - 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229928.peg.1068 CDS AZTR01000039.1 10076 9708 -2 - 369 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229928.peg.1069 CDS AZTR01000039.1 11801 10077 -2 - 1725 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229928.peg.1070 CDS AZTR01000039.1 11878 12726 1 + 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229928.peg.1071 CDS AZTR01000039.1 12996 14585 3 + 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229928.peg.1072 CDS AZTR01000039.1 14762 16099 2 + 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229928.peg.1073 CDS AZTR01000039.1 16792 16202 -1 - 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229928.peg.1074 CDS AZTR01000039.1 16985 18043 2 + 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229928.peg.1075 CDS AZTR01000039.1 18233 19057 2 + 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229928.peg.1076 CDS AZTR01000039.1 19991 19116 -2 - 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229928.peg.1077 CDS AZTR01000039.1 20232 22163 3 + 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229928.peg.1078 CDS AZTR01000039.1 22414 22860 1 + 447 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229928.peg.1079 CDS AZTR01000039.1 22905 23633 3 + 729 Type III restriction-modification system restriction subunit (EC 3.1.21.5) - none -
fig|6666666.229928.peg.1080 CDS AZTR01000039.1 23636 23935 2 + 300 Type III restriction-modification system restriction subunit (EC 3.1.21.5) - none -
fig|6666666.229928.peg.1081 CDS AZTR01000039.1 23937 24074 3 + 138 hypothetical protein - none -
fig|6666666.229928.peg.1082 CDS AZTR01000039.1 24831 24052 -3 - 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229928.peg.1083 CDS AZTR01000039.1 25206 25685 3 + 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229928.peg.1084 CDS AZTR01000039.1 25829 25686 -2 - 144 hypothetical protein - none -
fig|6666666.229928.peg.1085 CDS AZTR01000039.1 26160 26513 3 + 354 LSU ribosomal protein L20p Ribosome LSU bacterial
fig|6666666.229928.peg.1086 CDS AZTR01000039.1 26675 26562 -2 - 114 hypothetical protein - none -
fig|6666666.229928.peg.1087 CDS AZTR01000039.1 27962 27843 -2 - 120 hypothetical protein - none -
fig|6666666.229928.peg.1088 CDS AZTR01000039.1 28053 29003 3 + 951 Tagatose 1,6-bisphosphate aldolase (EC 4.1.2.40) - none -
fig|6666666.229928.peg.1089 CDS AZTR01000039.1 29021 29470 2 + 450 Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144) - none -
fig|6666666.229928.peg.1090 CDS AZTR01000040.1 5 310 2 + 306 Galactitol utilization operon repressor - none -
fig|6666666.229928.peg.1091 CDS AZTR01000040.1 2280 430 -3 - 1851 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229928.peg.1092 CDS AZTR01000040.1 3255 2365 -3 - 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229928.peg.1093 CDS AZTR01000040.1 3511 3266 -1 - 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229928.peg.1094 CDS AZTR01000040.1 3736 4632 1 + 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229928.peg.1095 CDS AZTR01000040.1 4655 6001 2 + 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229928.peg.1096 CDS AZTR01000040.1 6699 6058 -3 - 642 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229928.peg.1097 CDS AZTR01000040.1 8218 6761 -1 - 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.1098 CDS AZTR01000040.1 9140 8232 -2 - 909 Putative surface protein - none -
fig|6666666.229928.peg.1099 CDS AZTR01000040.1 9271 9474 1 + 204 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229928.peg.1100 CDS AZTR01000040.1 9482 9949 2 + 468 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229928.peg.1101 CDS AZTR01000040.1 9994 10857 1 + 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229928.peg.1102 CDS AZTR01000040.1 10940 11263 2 + 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229928.peg.1103 CDS AZTR01000040.1 13010 11619 -2 - 1392 hypothetical protein - none -
fig|6666666.229928.peg.1104 CDS AZTR01000040.1 13577 13846 2 + 270 hypothetical protein - none -
fig|6666666.229928.peg.1105 CDS AZTR01000040.1 14198 14632 2 + 435 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229928.peg.1106 CDS AZTR01000040.1 14635 14895 1 + 261 ABC transporter ATP-binding protein - none -
fig|6666666.229928.peg.1107 CDS AZTR01000040.1 14898 15245 3 + 348 ABC transporter ATP-binding protein - none -
fig|6666666.229928.peg.1108 CDS AZTR01000040.1 15242 16102 2 + 861 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229928.peg.1109 CDS AZTR01000040.1 16175 16321 2 + 147 hypothetical protein - none -
fig|6666666.229928.peg.1110 CDS AZTR01000040.1 16398 17846 3 + 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229928.peg.1111 CDS AZTR01000040.1 17897 23668 2 + 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229928.peg.1112 CDS AZTR01000040.1 23799 24848 3 + 1050 Putative membrane protein YeiH - none -
fig|6666666.229928.peg.1113 CDS AZTR01000040.1 25016 27325 2 + 2310 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229928.peg.1114 CDS AZTR01000040.1 28109 27435 -2 - 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229928.peg.1115 CDS AZTR01000040.1 28647 28186 -3 - 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229928.peg.1116 CDS AZTR01000040.1 30474 28702 -3 - 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229928.peg.1117 CDS AZTR01000040.1 30822 31913 3 + 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229928.peg.1118 CDS AZTR01000040.1 32005 32754 1 + 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229928.peg.1119 CDS AZTR01000040.1 32795 33655 2 + 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229928.peg.1120 CDS AZTR01000040.1 33649 34344 1 + 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229928.peg.1121 CDS AZTR01000040.1 35641 34427 -1 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229928.peg.1122 CDS AZTR01000040.1 35755 35892 1 + 138 hypothetical protein - none -
fig|6666666.229928.peg.1123 CDS AZTR01000040.1 35936 36130 2 + 195 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229928.peg.1124 CDS AZTR01000040.1 36648 36385 -3 - 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229928.peg.1125 CDS AZTR01000040.1 36775 37509 1 + 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229928.peg.1126 CDS AZTR01000040.1 37528 38433 1 + 906 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229928.peg.1127 CDS AZTR01000040.1 38486 38677 2 + 192 hypothetical protein - none -
fig|6666666.229928.peg.1128 CDS AZTR01000040.1 39334 38729 -1 - 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229928.peg.1129 CDS AZTR01000040.1 40832 39438 -2 - 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229928.peg.1130 CDS AZTR01000040.1 41042 41491 2 + 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229928.peg.1131 CDS AZTR01000040.1 41530 41658 1 + 129 RNA-binding domain protein - none -
fig|6666666.229928.peg.1132 CDS AZTR01000040.1 41686 41835 1 + 150 RNA-binding domain protein - none -
fig|6666666.229928.peg.1133 CDS AZTR01000040.1 42232 42450 1 + 219 hypothetical protein - none -
fig|6666666.229928.peg.1134 CDS AZTR01000040.1 42534 45398 3 + 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229928.peg.1135 CDS AZTR01000040.1 45465 46358 3 + 894 hypothetical protein - none -
fig|6666666.229928.peg.1136 CDS AZTR01000040.1 46593 46477 -3 - 117 HipA protein Persister Cells
fig|6666666.229928.peg.1137 CDS AZTR01000040.1 46925 46587 -2 - 339 HipA protein Persister Cells
fig|6666666.229928.peg.1138 CDS AZTR01000040.1 47256 46975 -3 - 282 HipB protein Persister Cells
fig|6666666.229928.peg.1139 CDS AZTR01000040.1 48914 47400 -2 - 1515 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229928.peg.1140 CDS AZTR01000040.1 50087 48927 -2 - 1161 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229928.peg.1141 CDS AZTR01000040.1 50296 50778 1 + 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229928.peg.1142 CDS AZTR01000040.1 52876 50897 -1 - 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229928.peg.1143 CDS AZTR01000040.1 53737 52949 -1 - 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229928.peg.1144 CDS AZTR01000040.1 54685 53828 -1 - 858 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229928.peg.1145 CDS AZTR01000040.1 55437 54808 -3 - 630 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229928.peg.1146 CDS AZTR01000040.1 55868 55443 -2 - 426 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229928.peg.1147 CDS AZTR01000040.1 57566 56058 -2 - 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229928.peg.1148 CDS AZTR01000040.1 58525 57623 -1 - 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229928.peg.1149 CDS AZTR01000040.1 58805 58644 -2 - 162 hypothetical protein - none -
fig|6666666.229928.peg.1150 CDS AZTR01000040.1 58889 59572 2 + 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229928.peg.1151 CDS AZTR01000040.1 59585 61306 2 + 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229928.peg.1152 CDS AZTR01000040.1 61339 61986 1 + 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229928.peg.1153 CDS AZTR01000040.1 62003 62695 2 + 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229928.peg.1154 CDS AZTR01000040.1 62874 63569 3 + 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229928.peg.1155 CDS AZTR01000041.1 2 238 2 + 237 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229928.peg.1156 CDS AZTR01000041.1 238 891 1 + 654 Substrate-specific component NikM of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229928.peg.1157 CDS AZTR01000041.1 888 1553 3 + 666 Transmembrane component NikQ of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229928.peg.1158 CDS AZTR01000041.1 1550 2173 2 + 624 ATPase component NikO of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229928.peg.1159 CDS AZTR01000041.1 2252 3061 2 + 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229928.peg.1160 CDS AZTR01000041.1 3088 4200 1 + 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229928.peg.1161 CDS AZTR01000041.1 4200 5213 3 + 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229928.peg.1162 CDS AZTR01000041.1 5235 5387 3 + 153 hypothetical protein - none -
fig|6666666.229928.peg.1163 CDS AZTR01000041.1 7993 7178 -1 - 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229928.peg.1164 CDS AZTR01000041.1 9027 8143 -3 - 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229928.peg.1165 CDS AZTR01000041.1 10269 9202 -3 - 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229928.peg.1166 CDS AZTR01000041.1 11392 10274 -1 - 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229928.peg.1167 CDS AZTR01000041.1 11529 13019 3 + 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229928.peg.1168 CDS AZTR01000041.1 14225 13164 -2 - 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229928.peg.1169 CDS AZTR01000041.1 14940 14212 -3 - 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229928.peg.1170 CDS AZTR01000041.1 15782 15018 -2 - 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229928.peg.1171 CDS AZTR01000041.1 16009 16788 1 + 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229928.peg.1172 CDS AZTR01000041.1 17009 18352 2 + 1344 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229928.peg.1173 CDS AZTR01000041.1 19015 18419 -1 - 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229928.peg.1174 CDS AZTR01000041.1 20052 19024 -3 - 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229928.peg.1175 CDS AZTR01000041.1 21185 20061 -2 - 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229928.peg.1176 CDS AZTR01000041.1 21637 21185 -1 - 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229928.peg.1177 CDS AZTR01000041.1 22815 21754 -3 - 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229928.peg.1178 CDS AZTR01000041.1 23740 22835 -1 - 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229928.peg.1179 CDS AZTR01000041.1 24202 25221 1 + 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229928.peg.1180 CDS AZTR01000041.1 25590 26330 3 + 741 FIG00698611: hypothetical protein - none -
fig|6666666.229928.peg.1181 CDS AZTR01000041.1 27421 26486 -1 - 936 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229928.peg.1182 CDS AZTR01000041.1 27516 27683 3 + 168 hypothetical protein - none -
fig|6666666.229928.peg.1183 CDS AZTR01000041.1 27677 28144 2 + 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229928.peg.1184 CDS AZTR01000041.1 28168 29055 1 + 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229928.peg.1185 CDS AZTR01000041.1 29246 29827 2 + 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229928.peg.1186 CDS AZTR01000041.1 29827 30417 1 + 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229928.peg.1187 CDS AZTR01000042.1 349 113 -1 - 237 hypothetical protein - none -
fig|6666666.229928.peg.1188 CDS AZTR01000042.1 327 1349 3 + 1023 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229928.peg.1189 CDS AZTR01000042.1 1356 1976 3 + 621 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229928.peg.1190 CDS AZTR01000042.1 1969 2754 1 + 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229928.peg.1191 CDS AZTR01000042.1 2901 3536 3 + 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229928.peg.1192 CDS AZTR01000042.1 3561 4928 3 + 1368 sodium-dependent transporter - none -
fig|6666666.229928.peg.1193 CDS AZTR01000042.1 6108 5323 -3 - 786 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229928.peg.1194 CDS AZTR01000042.1 6893 6120 -2 - 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229928.peg.1195 CDS AZTR01000042.1 7082 8614 2 + 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229928.peg.1196 CDS AZTR01000042.1 9480 8722 -3 - 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229928.peg.1197 CDS AZTR01000042.1 10415 9492 -2 - 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229928.peg.1198 CDS AZTR01000042.1 11388 10423 -3 - 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229928.peg.1199 CDS AZTR01000042.1 12347 11448 -2 - 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229928.peg.1200 CDS AZTR01000042.1 12576 14552 3 + 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229928.peg.1201 CDS AZTR01000042.1 15486 14626 -3 - 861 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229928.peg.1202 CDS AZTR01000042.1 15911 16327 2 + 417 Protein ygiW precursor - none -
fig|6666666.229928.peg.1203 CDS AZTR01000042.1 16465 17136 1 + 672 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229928.peg.1204 CDS AZTR01000042.1 17123 18499 2 + 1377 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229928.peg.1205 CDS AZTR01000042.1 20394 18625 -3 - 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229928.peg.1206 CDS AZTR01000042.1 20872 20627 -1 - 246 FIG00696862: hypothetical protein - none -
fig|6666666.229928.peg.1207 CDS AZTR01000042.1 22403 21066 -2 - 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229928.peg.1208 CDS AZTR01000042.1 23325 22498 -3 - 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229928.peg.1209 CDS AZTR01000042.1 23612 23496 -2 - 117 hypothetical protein - none -
fig|6666666.229928.peg.1210 CDS AZTR01000042.1 23682 25265 3 + 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229928.peg.1211 CDS AZTR01000042.1 25452 25802 3 + 351 YPPCP.09C homologue - none -
fig|6666666.229928.peg.1212 CDS AZTR01000042.1 25799 26098 2 + 300 Putative transcriptional regulator - none -
fig|6666666.229928.peg.1213 CDS AZTR01000042.1 29067 26134 -3 - 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229928.peg.1214 CDS AZTR01000042.1 29489 31795 2 + 2307 CRISPR-associated protein Cas3@1@1 CRISPRs
fig|6666666.229928.peg.1215 CDS AZTR01000042.1 32301 32807 3 + 507 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229928.peg.1216 CDS AZTR01000042.1 32797 34551 1 + 1755 Overcoming lysogenization defect protein - none -
fig|6666666.229928.peg.1217 CDS AZTR01000042.1 34674 35618 3 + 945 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229928.peg.1218 CDS AZTR01000042.1 35622 35915 3 + 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229928.peg.1219 CDS AZTR01000042.1 36605 36985 2 + 381 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229928.peg.1220 CDS AZTR01000042.1 37007 38011 2 + 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229928.peg.1221 CDS AZTR01000042.1 38020 39648 1 + 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229928.peg.1222 CDS AZTR01000042.1 39632 40279 2 + 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229928.peg.1223 CDS AZTR01000042.1 40324 41328 1 + 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229928.peg.1224 CDS AZTR01000042.1 42808 41426 -1 - 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229928.peg.1225 CDS AZTR01000042.1 42871 43041 1 + 171 hypothetical protein - none -
fig|6666666.229928.peg.1226 CDS AZTR01000042.1 43409 42999 -2 - 411 probable membrane protein YPO3565 - none -
fig|6666666.229928.peg.1227 CDS AZTR01000042.1 45343 43580 -1 - 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229928.peg.1228 CDS AZTR01000042.1 46639 45434 -1 - 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229928.peg.1229 CDS AZTR01000042.1 46815 47153 3 + 339 FIG00904093: hypothetical protein - none -
fig|6666666.229928.peg.1230 CDS AZTR01000042.1 47342 48835 2 + 1494 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229928.peg.1231 CDS AZTR01000042.1 49591 48893 -1 - 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229928.peg.1232 CDS AZTR01000042.1 49612 50313 1 + 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229928.peg.1233 CDS AZTR01000042.1 50498 51802 2 + 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229928.peg.1234 CDS AZTR01000042.1 51864 53087 3 + 1224 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229928.peg.1235 CDS AZTR01000042.1 54468 53824 -3 - 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229928.peg.1236 CDS AZTR01000042.1 55890 54601 -3 - 1290 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229928.peg.1237 CDS AZTR01000042.1 56238 55897 -3 - 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229928.peg.1238 CDS AZTR01000042.1 57260 56244 -2 - 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229928.peg.1239 CDS AZTR01000042.1 57454 57840 1 + 387 Integral membrane protein - none -
fig|6666666.229928.peg.1240 CDS AZTR01000042.1 57965 58906 2 + 942 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229928.peg.1241 CDS AZTR01000042.1 58860 58985 3 + 126 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229928.peg.1242 CDS AZTR01000042.1 60359 59013 -2 - 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229928.peg.1243 CDS AZTR01000042.1 61248 60391 -3 - 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229928.peg.1244 CDS AZTR01000042.1 62264 61311 -2 - 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229928.peg.1245 CDS AZTR01000042.1 64046 64996 2 + 951 hypothetical protein - none -
fig|6666666.229928.peg.1246 CDS AZTR01000042.1 65673 65497 -3 - 177 hypothetical protein - none -
fig|6666666.229928.peg.1247 CDS AZTR01000042.1 66526 66302 -1 - 225 hypothetical protein - none -
fig|6666666.229928.peg.1248 CDS AZTR01000042.1 66947 66591 -2 - 357 hypothetical protein - none -
fig|6666666.229928.peg.1249 CDS AZTR01000042.1 67031 67390 2 + 360 phage-related protein - none -
fig|6666666.229928.peg.1250 CDS AZTR01000042.1 67835 67416 -2 - 420 hypothetical protein - none -
fig|6666666.229928.peg.1251 CDS AZTR01000042.1 68069 67887 -2 - 183 hypothetical protein - none -
fig|6666666.229928.peg.1252 CDS AZTR01000042.1 68322 69473 3 + 1152 Family of unknown function (DUF450) family - none -
fig|6666666.229928.peg.1253 CDS AZTR01000042.1 69445 69573 1 + 129 hypothetical protein - none -
fig|6666666.229928.peg.1254 CDS AZTR01000042.1 69784 71022 1 + 1239 Phage tail fibers Phage tail fiber proteins
fig|6666666.229928.peg.1255 CDS AZTR01000042.1 71022 71633 3 + 612 Phage tail fibers Phage tail fiber proteins
fig|6666666.229928.peg.1256 CDS AZTR01000042.1 72388 71630 -1 - 759 Integrase - none -
fig|6666666.229928.peg.1257 CDS AZTR01000042.1 74128 72569 -1 - 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229928.peg.1258 CDS AZTR01000042.1 74426 74160 -2 - 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229928.peg.1259 CDS AZTR01000042.1 74710 74438 -1 - 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229928.peg.1260 CDS AZTR01000042.1 74935 74750 -1 - 186 hypothetical protein - none -
fig|6666666.229928.peg.1261 CDS AZTR01000042.1 76317 74965 -3 - 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229928.peg.1262 CDS AZTR01000042.1 76756 77211 1 + 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229928.peg.1263 CDS AZTR01000042.1 77235 78731 3 + 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229928.peg.1264 CDS AZTR01000042.1 78747 81236 3 + 2490 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229928.peg.1265 CDS AZTR01000042.1 81768 82139 3 + 372 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229928.peg.1266 CDS AZTR01000042.1 82152 83069 3 + 918 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229928.peg.1267 CDS AZTR01000042.1 83263 83111 -1 - 153 hypothetical protein - none -
fig|6666666.229928.peg.1268 CDS AZTR01000042.1 83967 83356 -3 - 612 hypothetical protein - none -
fig|6666666.229928.peg.1269 CDS AZTR01000043.1 1982 1257 -2 - 726 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229928.peg.1270 CDS AZTR01000043.1 2277 3812 3 + 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229928.peg.1271 CDS AZTR01000043.1 3823 5247 1 + 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229928.peg.1272 CDS AZTR01000043.1 5428 5670 1 + 243 DNA-damage-inducible protein d - none -
fig|6666666.229928.peg.1273 CDS AZTR01000043.1 5802 5641 -3 - 162 hypothetical protein - none -
fig|6666666.229928.peg.1274 CDS AZTR01000043.1 6271 7119 1 + 849 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229928.peg.1275 CDS AZTR01000043.1 7796 8740 2 + 945 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229928.peg.1276 CDS AZTR01000043.1 8978 10048 2 + 1071 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229928.peg.1277 CDS AZTR01000044.1 23 670 2 + 648 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229928.peg.1278 CDS AZTR01000044.1 667 1515 1 + 849 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229928.peg.1279 CDS AZTR01000044.1 1535 2626 2 + 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229928.peg.1280 CDS AZTR01000044.1 4840 3011 -1 - 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229928.peg.1281 CDS AZTR01000044.1 5752 4979 -1 - 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) - none -
fig|6666666.229928.peg.1282 CDS AZTR01000044.1 5933 5754 -2 - 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.229928.peg.1283 CDS AZTR01000044.1 6929 5955 -2 - 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) - none -
fig|6666666.229928.peg.1284 CDS AZTR01000044.1 8696 6948 -2 - 1749 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229928.peg.1285 CDS AZTR01000044.1 11172 8743 -3 - 2430 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.229928.peg.1286 CDS AZTR01000044.1 11470 11907 1 + 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229928.peg.1287 CDS AZTR01000044.1 12024 13970 3 + 1947 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229928.peg.1288 CDS AZTR01000044.1 14403 14041 -3 - 363 hypothetical protein - none -
fig|6666666.229928.peg.1289 CDS AZTR01000044.1 16885 14750 -1 - 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229928.peg.1290 CDS AZTR01000044.1 18157 16955 -1 - 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229928.peg.1291 CDS AZTR01000044.1 18425 18868 2 + 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229928.peg.1292 CDS AZTR01000044.1 19047 19589 3 + 543 Colicin V production protein - none -
fig|6666666.229928.peg.1293 CDS AZTR01000044.1 19711 19586 -1 - 126 hypothetical protein - none -
fig|6666666.229928.peg.1294 CDS AZTR01000044.1 21808 19733 -1 - 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229928.peg.1295 CDS AZTR01000044.1 24301 21911 -1 - 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229928.peg.1296 CDS AZTR01000044.1 24470 27184 2 + 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229928.peg.1297 CDS AZTR01000044.1 28197 27337 -3 - 861 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229928.peg.1298 CDS AZTR01000044.1 28591 31248 1 + 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229928.peg.1299 CDS AZTR01000044.1 31277 32947 2 + 1671 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229928.peg.1300 CDS AZTR01000044.1 32984 34465 2 + 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229928.peg.1301 CDS AZTR01000044.1 34670 34551 -2 - 120 hypothetical protein - none -
fig|6666666.229928.peg.1302 CDS AZTR01000044.1 35449 34895 -1 - 555 FIG002003: Protein YdjA - none -
fig|6666666.229928.peg.1303 CDS AZTR01000044.1 35573 37453 2 + 1881 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229928.peg.1304 CDS AZTR01000044.1 37494 38618 3 + 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229928.peg.1305 CDS AZTR01000045.1 19 1005 1 + 987 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229928.peg.1306 CDS AZTR01000045.1 1017 1988 3 + 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229928.peg.1307 CDS AZTR01000045.1 2073 2900 3 + 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229928.peg.1308 CDS AZTR01000045.1 3335 3015 -2 - 321 putative cytoplasmic protein - none -
fig|6666666.229928.peg.1309 CDS AZTR01000045.1 3503 3369 -2 - 135 hypothetical protein - none -
fig|6666666.229928.peg.1310 CDS AZTR01000045.1 4804 3806 -1 - 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229928.peg.1311 CDS AZTR01000046.1 1528 101 -1 - 1428 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229928.peg.1312 CDS AZTR01000046.1 2412 1540 -3 - 873 Integral membrane protein - none -
fig|6666666.229928.peg.1313 CDS AZTR01000046.1 3561 2488 -3 - 1074 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229928.peg.1314 CDS AZTR01000047.1 3973 3233 -1 - 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229928.peg.1315 CDS AZTR01000047.1 4182 3994 -3 - 189 hypothetical protein - none -
fig|6666666.229928.peg.1316 CDS AZTR01000047.1 7499 4173 -2 - 3327 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229928.peg.1317 CDS AZTR01000047.1 8950 7622 -1 - 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229928.peg.1318 CDS AZTR01000047.1 10008 9130 -3 - 879 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229928.peg.1319 CDS AZTR01000047.1 10785 10183 -3 - 603 lipoprotein HlpB - none -
fig|6666666.229928.peg.1320 CDS AZTR01000047.1 11221 10934 -1 - 288 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.229928.peg.1321 CDS AZTR01000047.1 11435 12040 2 + 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229928.peg.1322 CDS AZTR01000047.1 14624 12159 -2 - 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229928.peg.1323 CDS AZTR01000047.1 16187 14748 -2 - 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229928.peg.1324 CDS AZTR01000047.1 17699 16389 -2 - 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229928.peg.1325 CDS AZTR01000047.1 19735 17726 -1 - 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229928.peg.1326 CDS AZTR01000047.1 21927 19732 -3 - 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229928.peg.1327 CDS AZTR01000047.1 22484 21924 -2 - 561 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229928.peg.1328 CDS AZTR01000047.1 23018 22584 -2 - 435 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229928.peg.1329 CDS AZTR01000047.1 24781 23090 -1 - 1692 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229928.peg.1330 CDS AZTR01000048.1 902 558 -2 - 345 Programmed cell death toxin MazF - none -
fig|6666666.229928.peg.1331 CDS AZTR01000048.1 1159 905 -1 - 255 hypothetical protein - none -
fig|6666666.229928.peg.1332 CDS AZTR01000048.1 1911 1732 -3 - 180 hypothetical protein - none -
fig|6666666.229928.peg.1333 CDS AZTR01000048.1 2344 2225 -1 - 120 Haemophilus-specific protein, uncharacterized - none -
fig|6666666.229928.peg.1334 CDS AZTR01000048.1 2698 3240 1 + 543 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229928.peg.1335 CDS AZTR01000048.1 3935 3609 -2 - 327 Mobile element protein - none -
fig|6666666.229928.peg.1336 CDS AZTR01000048.1 4509 4138 -3 - 372 Mobile element protein - none -
fig|6666666.229928.peg.1337 CDS AZTR01000048.1 5280 4582 -3 - 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229928.peg.1338 CDS AZTR01000048.1 5943 5296 -3 - 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229928.peg.1339 CDS AZTR01000048.1 7535 6060 -2 - 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229928.peg.1340 CDS AZTR01000049.1 156 1304 3 + 1149 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229928.peg.1341 CDS AZTR01000049.1 1318 2283 1 + 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229928.peg.1342 CDS AZTR01000049.1 2371 3669 1 + 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229928.peg.1343 CDS AZTR01000049.1 4024 3734 -1 - 291 hypothetical protein - none -
fig|6666666.229928.peg.1344 CDS AZTR01000049.1 5030 4047 -2 - 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229928.peg.1345 CDS AZTR01000049.1 5318 6850 2 + 1533 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229928.peg.1346 CDS AZTR01000049.1 8116 6920 -1 - 1197 Sugar efflux transporter SotB - none -
fig|6666666.229928.peg.1347 CDS AZTR01000049.1 9320 8118 -2 - 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229928.peg.1348 CDS AZTR01000049.1 9905 9321 -2 - 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229928.peg.1349 CDS AZTR01000049.1 10565 9915 -2 - 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229928.peg.1350 CDS AZTR01000049.1 10874 11914 2 + 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229928.peg.1351 CDS AZTR01000049.1 12367 13119 1 + 753 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229928.peg.1352 CDS AZTR01000049.1 13147 15204 1 + 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229928.peg.1353 CDS AZTR01000049.1 15220 16266 1 + 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229928.peg.1354 CDS AZTR01000049.1 16545 18656 3 + 2112 unknown - none -
fig|6666666.229928.peg.1355 CDS AZTR01000049.1 19509 18709 -3 - 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229928.peg.1356 CDS AZTR01000049.1 19660 20385 1 + 726 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Bacteria
fig|6666666.229928.peg.1357 CDS AZTR01000049.1 20463 20936 3 + 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229928.peg.1358 CDS AZTR01000049.1 20990 22204 2 + 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229928.peg.1359 CDS AZTR01000049.1 22264 22647 1 + 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229928.peg.1360 CDS AZTR01000049.1 22779 23102 3 + 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229928.peg.1361 CDS AZTR01000049.1 23114 23635 2 + 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229928.peg.1362 CDS AZTR01000049.1 23656 25515 1 + 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229928.peg.1363 CDS AZTR01000049.1 25527 25868 3 + 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229928.peg.1364 CDS AZTR01000049.1 25868 26062 2 + 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229928.peg.1365 CDS AZTR01000049.1 28256 26196 -2 - 2061 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229928.peg.1366 CDS AZTR01000049.1 28429 29541 1 + 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229928.peg.1367 CDS AZTR01000049.1 29638 29519 -1 - 120 hypothetical protein - none -
fig|6666666.229928.peg.1368 CDS AZTR01000049.1 30776 29631 -2 - 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229928.peg.1369 CDS AZTR01000049.1 31337 30912 -2 - 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229928.peg.1370 CDS AZTR01000049.1 32656 31349 -1 - 1308 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229928.peg.1371 CDS AZTR01000049.1 32821 32699 -1 - 123 hypothetical protein - none -
fig|6666666.229928.peg.1372 CDS AZTR01000049.1 32876 33094 2 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229928.peg.1373 CDS AZTR01000049.1 34701 33157 -3 - 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229928.peg.1374 CDS AZTR01000049.1 35990 35094 -2 - 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229928.peg.1375 CDS AZTR01000049.1 36070 36198 1 + 129 hypothetical protein - none -
fig|6666666.229928.peg.1376 CDS AZTR01000049.1 36236 37243 2 + 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229928.peg.1377 CDS AZTR01000049.1 37283 37570 2 + 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229928.peg.1378 CDS AZTR01000049.1 37567 38442 1 + 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229928.peg.1379 CDS AZTR01000049.1 38457 39959 3 + 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229928.peg.1380 CDS AZTR01000049.1 40153 41565 1 + 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229928.peg.1381 CDS AZTR01000049.1 41552 42985 2 + 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229928.peg.1382 CDS AZTR01000049.1 43264 44763 1 + 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229928.peg.1383 CDS AZTR01000049.1 46059 45028 -3 - 1032 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229928.peg.1384 CDS AZTR01000049.1 47207 46053 -2 - 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229928.peg.1385 CDS AZTR01000049.1 48317 47274 -2 - 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229928.peg.1386 CDS AZTR01000049.1 48569 49582 2 + 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229928.peg.1387 CDS AZTR01000049.1 49797 50789 3 + 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229928.peg.1388 CDS AZTR01000049.1 50864 52402 2 + 1539 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229928.peg.1389 CDS AZTR01000049.1 52421 53431 2 + 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229928.peg.1390 CDS AZTR01000049.1 55364 53505 -2 - 1860 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229928.peg.1391 CDS AZTR01000049.1 55390 55524 1 + 135 hypothetical protein - none -
fig|6666666.229928.peg.1392 CDS AZTR01000049.1 56725 55505 -1 - 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229928.peg.1393 CDS AZTR01000049.1 56895 58913 3 + 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229928.peg.1394 CDS AZTR01000049.1 59103 62174 3 + 3072 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229928.peg.1395 CDS AZTR01000049.1 62863 62285 -1 - 579 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229928.peg.1396 CDS AZTR01000049.1 62831 62959 2 + 129 hypothetical protein - none -
fig|6666666.229928.peg.1397 CDS AZTR01000049.1 63004 63921 1 + 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229928.peg.1398 CDS AZTR01000049.1 63995 65671 2 + 1677 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229928.peg.1399 CDS AZTR01000049.1 66157 65738 -1 - 420 Outer membrane protein W precursor - none -
fig|6666666.229928.peg.1400 CDS AZTR01000049.1 66385 66161 -1 - 225 hypothetical protein - none -
fig|6666666.229928.peg.1401 CDS AZTR01000049.1 66657 67415 3 + 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229928.peg.1402 CDS AZTR01000049.1 67421 67972 2 + 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229928.peg.1403 CDS AZTR01000049.1 67976 68446 2 + 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229928.peg.1404 CDS AZTR01000049.1 68449 68745 1 + 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229928.peg.1405 CDS AZTR01000049.1 68951 71167 2 + 2217 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229928.peg.1406 CDS AZTR01000049.1 71200 71508 1 + 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229928.peg.1407 CDS AZTR01000049.1 71486 72259 2 + 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229928.peg.1408 CDS AZTR01000049.1 72769 72515 -1 - 255 hypothetical protein - none -
fig|6666666.229928.peg.1409 CDS AZTR01000049.1 73601 73350 -2 - 252 hypothetical protein - none -
fig|6666666.229928.peg.1410 CDS AZTR01000049.1 74211 73624 -3 - 588 Integrase - none -
fig|6666666.229928.peg.1411 CDS AZTR01000049.1 75025 74687 -1 - 339 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.229928.peg.1412 CDS AZTR01000049.1 75184 75053 -1 - 132 hypothetical protein - none -
fig|6666666.229928.peg.1413 CDS AZTR01000049.1 77135 75198 -2 - 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229928.peg.1414 CDS AZTR01000049.1 77769 77167 -3 - 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229928.peg.1415 CDS AZTR01000049.1 78297 77854 -3 - 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229928.peg.1416 CDS AZTR01000049.1 78368 79438 2 + 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229928.peg.1417 CDS AZTR01000049.1 79507 80400 1 + 894 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229928.peg.1418 CDS AZTR01000049.1 80400 81389 3 + 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229928.peg.1419 CDS AZTR01000049.1 81389 82372 2 + 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229928.peg.1420 CDS AZTR01000049.1 82372 83139 1 + 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229928.peg.1421 CDS AZTR01000049.1 84176 83205 -2 - 972 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229928.peg.1422 CDS AZTR01000049.1 84484 86292 1 + 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229928.peg.1423 CDS AZTR01000049.1 86297 87067 2 + 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229928.peg.1424 CDS AZTR01000049.1 87079 87471 1 + 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229928.peg.1425 CDS AZTR01000049.1 87481 87825 1 + 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229928.peg.1426 CDS AZTR01000049.1 90069 87922 -3 - 2148 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229928.peg.1427 CDS AZTR01000049.1 90340 91368 1 + 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.1428 CDS AZTR01000049.1 92661 91447 -3 - 1215 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.229928.peg.1429 CDS AZTR01000049.1 93483 92779 -3 - 705 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229928.peg.1430 CDS AZTR01000049.1 93654 93517 -3 - 138 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229928.peg.1431 CDS AZTR01000049.1 93838 94302 1 + 465 FIG00710847: hypothetical protein - none -
fig|6666666.229928.peg.1432 CDS AZTR01000049.1 94275 95093 3 + 819 FIG00711691: hypothetical protein - none -
fig|6666666.229928.peg.1433 CDS AZTR01000049.1 96438 95614 -3 - 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229928.peg.1434 CDS AZTR01000049.1 97112 96489 -2 - 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229928.peg.1435 CDS AZTR01000049.1 98038 97358 -1 - 681 FIG009095: D,D-carboxypeptidase family protein CBSS-584.1.peg.1352
fig|6666666.229928.peg.1436 CDS AZTR01000049.1 99173 98040 -2 - 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229928.peg.1437 CDS AZTR01000049.1 99654 99310 -3 - 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352
fig|6666666.229928.peg.1438 CDS AZTR01000049.1 101600 99720 -2 - 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229928.peg.1439 CDS AZTR01000049.1 102216 101734 -3 - 483 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229928.peg.1440 CDS AZTR01000049.1 102894 102316 -3 - 579 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229928.peg.1441 CDS AZTR01000049.1 104009 103092 -2 - 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) - none -
fig|6666666.229928.peg.1442 CDS AZTR01000049.1 105330 104047 -3 - 1284 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229928.peg.1443 CDS AZTR01000049.1 106694 105414 -2 - 1281 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229928.peg.1444 CDS AZTR01000049.1 107486 106719 -2 - 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229928.peg.1445 CDS AZTR01000049.1 108412 107483 -1 - 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229928.peg.1446 CDS AZTR01000049.1 109855 108425 -1 - 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229928.peg.1447 CDS AZTR01000049.1 110990 109926 -2 - 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229928.peg.1448 CDS AZTR01000049.1 112221 111031 -3 - 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229928.peg.1449 CDS AZTR01000049.1 113540 112236 -2 - 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229928.peg.1450 CDS AZTR01000049.1 114652 113567 -1 - 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229928.peg.1451 CDS AZTR01000049.1 116025 114646 -3 - 1380 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229928.peg.1452 CDS AZTR01000049.1 117498 116032 -3 - 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229928.peg.1453 CDS AZTR01000049.1 119339 117516 -2 - 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229928.peg.1454 CDS AZTR01000049.1 119674 119357 -1 - 318 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229928.peg.1455 CDS AZTR01000049.1 120642 119674 -3 - 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229928.peg.1456 CDS AZTR01000049.1 121210 120752 -1 - 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229928.peg.1457 CDS AZTR01000049.1 123072 121474 -3 - 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229928.peg.1458 CDS AZTR01000049.1 124300 123614 -1 - 687 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229928.peg.1459 CDS AZTR01000049.1 124962 124300 -3 - 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229928.peg.1460 CDS AZTR01000049.1 125686 124967 -1 - 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229928.peg.1461 CDS AZTR01000049.1 126441 125707 -3 - 735 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229928.peg.1462 CDS AZTR01000049.1 127166 126582 -2 - 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229928.peg.1463 CDS AZTR01000049.1 130789 127268 -1 - 3522 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229928.peg.1464 CDS AZTR01000049.1 131027 130854 -2 - 174 hypothetical protein - none -
fig|6666666.229928.peg.1465 CDS AZTR01000049.1 132990 131068 -3 - 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229928.peg.1466 CDS AZTR01000049.1 133692 132994 -3 - 699 unknown - none -
fig|6666666.229928.peg.1467 CDS AZTR01000049.1 134318 133854 -2 - 465 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229928.peg.1468 CDS AZTR01000049.1 134919 134806 -3 - 114 hypothetical protein - none -
fig|6666666.229928.peg.1469 CDS AZTR01000049.1 134885 135115 2 + 231 Flp pilus assembly protein, pilin Flp Widespread colonization island
fig|6666666.229928.peg.1470 CDS AZTR01000049.1 135708 135884 3 + 177 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229928.peg.1471 CDS AZTR01000049.1 135935 136759 2 + 825 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229928.peg.1472 CDS AZTR01000049.1 136881 138143 3 + 1263 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229928.peg.1473 CDS AZTR01000049.1 138140 138643 2 + 504 Flp pilus assembly protein RcpB Widespread colonization island
fig|6666666.229928.peg.1474 CDS AZTR01000049.1 138659 139783 2 + 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229928.peg.1475 CDS AZTR01000049.1 139797 141077 3 + 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229928.peg.1476 CDS AZTR01000049.1 141077 141964 2 + 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229928.peg.1477 CDS AZTR01000049.1 141961 142827 1 + 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229928.peg.1478 CDS AZTR01000049.1 142817 143578 2 + 762 Flp pilus assembly protein TadD, contains TPR repeat Widespread colonization island
fig|6666666.229928.peg.1479 CDS AZTR01000049.1 144498 144815 3 + 318 Flp pilus assembly surface protein TadF, ATP/GTP-binding motif Widespread colonization island
fig|6666666.229928.peg.1480 CDS AZTR01000049.1 144831 146468 3 + 1638 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229928.peg.1481 CDS AZTR01000049.1 147682 147446 -1 - 237 Mobile element protein - none -
fig|6666666.229928.peg.1482 CDS AZTR01000049.1 147842 147726 -2 - 117 hypothetical protein - none -
fig|6666666.229928.peg.1483 CDS AZTR01000049.1 150168 148666 -3 - 1503 Sodium-dependent transporter - none -
fig|6666666.229928.peg.1484 CDS AZTR01000049.1 150584 150859 2 + 276 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229928.peg.1485 CDS AZTR01000049.1 150861 151016 3 + 156 hypothetical protein - none -
fig|6666666.229928.peg.1486 CDS AZTR01000049.1 150998 151309 2 + 312 Membrane protein, MgtC/SapB family - none -
fig|6666666.229928.peg.1487 CDS AZTR01000049.1 152250 151348 -3 - 903 hypothetical protein - none -
fig|6666666.229928.peg.1488 CDS AZTR01000049.1 154155 152296 -3 - 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229928.peg.1489 CDS AZTR01000049.1 155546 154152 -2 - 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229928.peg.1490 CDS AZTR01000049.1 155690 157405 2 + 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229928.peg.1491 CDS AZTR01000049.1 157490 157678 2 + 189 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229928.peg.1492 CDS AZTR01000049.1 157718 157972 2 + 255 YgfY COG2938 - none -
fig|6666666.229928.peg.1493 CDS AZTR01000049.1 158105 158680 2 + 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229928.peg.1494 CDS AZTR01000049.1 158719 159303 1 + 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229928.peg.1495 CDS AZTR01000049.1 159386 160342 2 + 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229928.peg.1496 CDS AZTR01000049.1 160352 160789 2 + 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229928.peg.1497 CDS AZTR01000049.1 160870 161382 1 + 513 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229928.peg.1498 CDS AZTR01000050.1 1497 37 -3 - 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229928.peg.1499 CDS AZTR01000050.1 1612 2076 1 + 465 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229928.peg.1500 CDS AZTR01000050.1 4507 2165 -1 - 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229928.peg.1501 CDS AZTR01000050.1 5133 4573 -3 - 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229928.peg.1502 CDS AZTR01000050.1 5332 5937 1 + 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229928.peg.1503 CDS AZTR01000050.1 7240 5990 -1 - 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229928.peg.1504 CDS AZTR01000050.1 7377 7258 -3 - 120 hypothetical protein - none -
fig|6666666.229928.peg.1505 CDS AZTR01000050.1 7500 7814 3 + 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229928.peg.1506 CDS AZTR01000050.1 7811 9700 2 + 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229928.peg.1507 CDS AZTR01000050.1 9797 12217 2 + 2421 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229928.peg.1508 CDS AZTR01000050.1 13186 12272 -1 - 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229928.peg.1509 CDS AZTR01000051.1 2805 1798 -3 - 1008 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229928.peg.1510 CDS AZTR01000052.1 159 332 3 + 174 hypothetical protein - none -
fig|6666666.229928.peg.1511 CDS AZTR01000052.1 485 1135 2 + 651 Mobile element protein - none -
fig|6666666.229928.peg.1512 CDS AZTR01000053.1 295 666 1 + 372 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.229928.peg.1513 CDS AZTR01000053.1 677 988 2 + 312 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.229928.peg.1514 CDS AZTR01000053.1 1117 1545 1 + 429 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.229928.peg.1515 CDS AZTR01000053.1 1558 1863 1 + 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229928.peg.1516 CDS AZTR01000053.1 1900 2292 1 + 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229928.peg.1517 CDS AZTR01000053.1 2308 2841 1 + 534 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.229928.peg.1518 CDS AZTR01000053.1 2855 3208 2 + 354 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.229928.peg.1519 CDS AZTR01000053.1 3224 3724 2 + 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229928.peg.1520 CDS AZTR01000053.1 3914 4348 2 + 435 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.229928.peg.1521 CDS AZTR01000053.1 4352 5677 2 + 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229928.peg.1522 CDS AZTR01000053.1 5703 5816 3 + 114 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.229928.peg.1523 CDS AZTR01000053.1 5958 6314 3 + 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229928.peg.1524 CDS AZTR01000053.1 6330 6719 3 + 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229928.peg.1525 CDS AZTR01000053.1 6749 7369 2 + 621 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229928.peg.1526 CDS AZTR01000053.1 7398 8387 3 + 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229928.peg.1527 CDS AZTR01000053.1 8429 8818 2 + 390 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.229928.peg.1528 CDS AZTR01000054.1 1013 99 -2 - 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229928.peg.1529 CDS AZTR01000054.1 1791 1063 -3 - 729 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229928.peg.1530 CDS AZTR01000054.1 1880 2533 2 + 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229928.peg.1531 CDS AZTR01000054.1 2812 3552 1 + 741 FIG00698611: hypothetical protein - none -
fig|6666666.229928.peg.1532 CDS AZTR01000054.1 4208 3714 -2 - 495 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229928.peg.1533 CDS AZTR01000054.1 4741 4199 -1 - 543 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229928.peg.1534 CDS AZTR01000054.1 5560 4766 -1 - 795 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229928.peg.1535 CDS AZTR01000054.1 6363 5560 -3 - 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229928.peg.1536 CDS AZTR01000054.1 8322 6904 -3 - 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229928.peg.1537 CDS AZTR01000054.1 9241 8285 -1 - 957 O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-) - none -
fig|6666666.229928.peg.1538 CDS AZTR01000054.1 10123 9251 -1 - 873 Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.229928.peg.1539 CDS AZTR01000054.1 11215 10181 -1 - 1035 Exopolysaccharide production protein ExoZ - none -
fig|6666666.229928.peg.1540 CDS AZTR01000054.1 12031 11219 -1 - 813 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229928.peg.1541 CDS AZTR01000054.1 13934 12036 -2 - 1899 Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L- rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.229928.peg.1542 CDS AZTR01000054.1 14592 13942 -3 - 651 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) Rhamnose containing glycans
fig|6666666.229928.peg.1543 CDS AZTR01000054.1 15476 14691 -2 - 786 O-antigen export system permease protein RfbD - none -
fig|6666666.229928.peg.1544 CDS AZTR01000054.1 16030 15488 -1 - 543 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229928.peg.1545 CDS AZTR01000054.1 16917 16033 -3 - 885 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229928.peg.1546 CDS AZTR01000054.1 17791 16919 -1 - 873 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229928.peg.1547 CDS AZTR01000054.1 18936 17869 -3 - 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229928.peg.1548 CDS AZTR01000054.1 20137 19007 -1 - 1131 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229928.peg.1549 CDS AZTR01000054.1 19989 20150 3 + 162 hypothetical protein - none -
fig|6666666.229928.peg.1550 CDS AZTR01000054.1 20924 20139 -2 - 786 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229928.peg.1551 CDS AZTR01000054.1 21898 21017 -1 - 882 Glycosyltransferase - none -
fig|6666666.229928.peg.1552 CDS AZTR01000054.1 23091 21898 -3 - 1194 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229928.peg.1553 CDS AZTR01000054.1 23876 23100 -2 - 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229928.peg.1554 CDS AZTR01000054.1 24007 25548 1 + 1542 putative flippase - none -
fig|6666666.229928.peg.1555 CDS AZTR01000054.1 25545 26501 3 + 957 Polysaccharide polymerization protein - none -
fig|6666666.229928.peg.1556 CDS AZTR01000054.1 26610 26861 3 + 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229928.peg.1557 CDS AZTR01000054.1 26858 27112 2 + 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229928.peg.1558 CDS AZTR01000054.1 27125 27868 2 + 744 Probable transmembrane protein - none -
fig|6666666.229928.peg.1559 CDS AZTR01000054.1 28162 28872 1 + 711 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229928.peg.1560 CDS AZTR01000054.1 31179 29005 -3 - 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229928.peg.1561 CDS AZTR01000054.1 32696 31347 -2 - 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229928.peg.1562 CDS AZTR01000054.1 32914 33432 1 + 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.229928.peg.1563 CDS AZTR01000054.1 33551 33429 -2 - 123 hypothetical protein - none -
fig|6666666.229928.peg.1564 CDS AZTR01000054.1 34500 33502 -3 - 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229928.peg.1565 CDS AZTR01000054.1 35373 34549 -3 - 825 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229928.peg.1566 CDS AZTR01000054.1 35681 35833 2 + 153 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase;
Selenocysteine metabolism
fig|6666666.229928.peg.1567 CDS AZTR01000054.1 35910 38705 3 + 2796 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229928.peg.1568 CDS AZTR01000054.1 38803 39633 1 + 831 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229928.peg.1569 CDS AZTR01000054.1 39626 40339 2 + 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229928.peg.1570 CDS AZTR01000054.1 40496 40612 2 + 117 hypothetical protein - none -
fig|6666666.229928.peg.1571 CDS AZTR01000054.1 43252 40967 -1 - 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229928.peg.1572 CDS AZTR01000054.1 43602 44147 3 + 546 Hydrogenase-4 component A - none -
fig|6666666.229928.peg.1573 CDS AZTR01000054.1 44180 46201 2 + 2022 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229928.peg.1574 CDS AZTR01000054.1 46212 47171 3 + 960 Hydrogenase-4 component C - none -
fig|6666666.229928.peg.1575 CDS AZTR01000054.1 47184 48629 3 + 1446 Hydrogenase-4 component D - none -
fig|6666666.229928.peg.1576 CDS AZTR01000054.1 48640 49278 1 + 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229928.peg.1577 CDS AZTR01000054.1 49283 50821 2 + 1539 Hydrogenase-4 component F - none -
fig|6666666.229928.peg.1578 CDS AZTR01000054.1 50841 52571 3 + 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229928.peg.1579 CDS AZTR01000054.1 52585 53232 1 + 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229928.peg.1580 CDS AZTR01000054.1 53229 54005 3 + 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229928.peg.1581 CDS AZTR01000054.1 54140 54544 2 + 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229928.peg.1582 CDS AZTR01000054.1 54534 54995 3 + 462 Hydrogenase 3 maturation protease (EC 3.4.-.-) - none -
fig|6666666.229928.peg.1583 CDS AZTR01000054.1 55524 57746 3 + 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229928.peg.1586 CDS AZTR01000054.1 58057 57917 -1 - 141 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229928.peg.1587 CDS AZTR01000055.1 1774 605 -1 - 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229928.peg.1588 CDS AZTR01000055.1 2182 1961 -1 - 222 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229928.peg.1589 CDS AZTR01000056.1 237 866 3 + 630 hypothetical protein - none -
fig|6666666.229928.peg.1590 CDS AZTR01000056.1 876 1046 3 + 171 hypothetical protein - none -
fig|6666666.229928.peg.1591 CDS AZTR01000056.1 3879 1072 -3 - 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229928.peg.1592 CDS AZTR01000056.1 3964 4086 1 + 123 hypothetical protein - none -
fig|6666666.229928.peg.1593 CDS AZTR01000056.1 4796 4158 -2 - 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229928.peg.1594 CDS AZTR01000056.1 5319 4873 -3 - 447 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229928.peg.1595 CDS AZTR01000056.1 7006 5498 -1 - 1509 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229928.peg.1596 CDS AZTR01000056.1 9141 7084 -3 - 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229928.peg.1597 CDS AZTR01000056.1 9823 9215 -1 - 609 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229928.peg.1598 CDS AZTR01000056.1 10041 11324 3 + 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229928.peg.1599 CDS AZTR01000056.1 11287 13944 1 + 2658 Paraquat-inducible protein B Oxidative stress
fig|6666666.229928.peg.1600 CDS AZTR01000056.1 15264 14020 -3 - 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229928.peg.1601 CDS AZTR01000056.1 15528 16646 3 + 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229928.peg.1602 CDS AZTR01000056.1 16630 17490 1 + 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229928.peg.1603 CDS AZTR01000056.1 17490 18263 3 + 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229928.peg.1604 CDS AZTR01000056.1 18394 19491 1 + 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229928.peg.1605 CDS AZTR01000056.1 19613 20509 2 + 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229928.peg.1606 CDS AZTR01000056.1 20607 20494 -3 - 114 hypothetical protein - none -
fig|6666666.229928.peg.1607 CDS AZTR01000056.1 21904 20588 -1 - 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229928.peg.1608 CDS AZTR01000056.1 22212 23879 3 + 1668 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229928.peg.1609 CDS AZTR01000056.1 25716 24376 -3 - 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229928.peg.1610 CDS AZTR01000056.1 26346 25729 -3 - 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229928.peg.1611 CDS AZTR01000056.1 29183 26439 -2 - 2745 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229928.peg.1612 CDS AZTR01000056.1 29666 29187 -2 - 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229928.peg.1613 CDS AZTR01000056.1 31578 30205 -3 - 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229928.peg.1614 CDS AZTR01000056.1 32735 31581 -2 - 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229928.peg.1615 CDS AZTR01000056.1 32900 33580 2 + 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229928.peg.1616 CDS AZTR01000056.1 33606 34871 3 + 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229928.peg.1617 CDS AZTR01000056.1 34940 35551 2 + 612 SH3 domain protein - none -
fig|6666666.229928.peg.1618 CDS AZTR01000056.1 35551 36855 1 + 1305 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229928.peg.1619 CDS AZTR01000056.1 36890 37513 2 + 624 Outer membrane lipoprotein LolB precursor - none -
fig|6666666.229928.peg.1620 CDS AZTR01000056.1 37513 38424 1 + 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229928.peg.1621 CDS AZTR01000056.1 38465 39415 2 + 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229928.peg.1622 CDS AZTR01000056.1 39592 39738 1 + 147 hypothetical protein - none -
fig|6666666.229928.peg.1623 CDS AZTR01000056.1 40044 41189 3 + 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229928.peg.1624 CDS AZTR01000056.1 41432 43021 2 + 1590 L-lactate permease Lactate utilization
fig|6666666.229928.peg.1625 CDS AZTR01000056.1 43508 43176 -2 - 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229928.peg.1626 CDS AZTR01000056.1 43533 43649 3 + 117 hypothetical protein - none -
fig|6666666.229928.peg.1627 CDS AZTR01000056.1 43708 44790 1 + 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229928.peg.1628 CDS AZTR01000056.1 44817 45962 3 + 1146 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229928.peg.1629 CDS AZTR01000056.1 45973 47304 1 + 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229928.peg.1630 CDS AZTR01000056.1 47850 47383 -3 - 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229928.peg.1631 CDS AZTR01000056.1 47918 48679 2 + 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229928.peg.1632 CDS AZTR01000056.1 49126 49380 1 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229928.peg.1633 CDS AZTR01000056.1 49370 49660 2 + 291 StbE replicon stabilization toxin - none -
fig|6666666.229928.peg.1634 CDS AZTR01000056.1 50056 49718 -1 - 339 conserved hypothetical protein - none -
fig|6666666.229928.peg.1635 CDS AZTR01000056.1 50484 50849 3 + 366 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229928.peg.1636 CDS AZTR01000056.1 51020 52408 2 + 1389 Putative protease - none -
fig|6666666.229928.peg.1637 CDS AZTR01000057.1 3 722 3 + 720 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229928.peg.1638 CDS AZTR01000057.1 1902 766 -3 - 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229928.peg.1639 CDS AZTR01000057.1 2375 3526 2 + 1152 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229928.peg.1640 CDS AZTR01000057.1 3661 3801 1 + 141 hypothetical protein - none -
fig|6666666.229928.peg.1641 CDS AZTR01000057.1 3818 4117 2 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229928.peg.1642 CDS AZTR01000057.1 4181 5998 2 + 1818 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229928.peg.1643 CDS AZTR01000057.1 6015 6980 3 + 966 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229928.peg.1644 CDS AZTR01000057.1 7200 9827 3 + 2628 Iron siderophore receptor protein - none -
fig|6666666.229928.peg.1645 CDS AZTR01000057.1 10074 9898 -3 - 177 hypothetical protein - none -
fig|6666666.229928.peg.1646 CDS AZTR01000057.1 10177 12798 1 + 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229928.peg.1647 CDS AZTR01000057.1 13834 12881 -1 - 954 Inositol transport system permease protein - none -
fig|6666666.229928.peg.1648 CDS AZTR01000057.1 14013 13885 -3 - 129 Inositol transport system ATP-binding protein - none -
fig|6666666.229928.peg.1649 CDS AZTR01000057.1 14012 14881 2 + 870 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) - none -
fig|6666666.229928.peg.1650 CDS AZTR01000057.1 15497 14985 -2 - 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229928.peg.1651 CDS AZTR01000057.1 16723 15575 -1 - 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229928.peg.1652 CDS AZTR01000057.1 18681 16801 -3 - 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229928.peg.1653 CDS AZTR01000057.1 20525 19092 -2 - 1434 Microcin H47 secretion protein - none -
fig|6666666.229928.peg.1654 CDS AZTR01000057.1 22663 20540 -1 - 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229928.peg.1655 CDS AZTR01000057.1 25899 22732 -3 - 3168 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229928.peg.1656 CDS AZTR01000057.1 26418 25912 -3 - 507 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229928.peg.1657 CDS AZTR01000057.1 28787 27525 -2 - 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.229928.peg.1658 CDS AZTR01000057.1 29464 28922 -1 - 543 hypothetical protein - none -
fig|6666666.229928.peg.1659 CDS AZTR01000057.1 29994 29845 -3 - 150 hypothetical protein - none -
fig|6666666.229928.peg.1660 CDS AZTR01000057.1 31085 30081 -2 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229928.peg.1661 CDS AZTR01000057.1 31141 31590 1 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229928.peg.1662 CDS AZTR01000057.1 31600 32043 1 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial
fig|6666666.229928.peg.1663 CDS AZTR01000057.1 35461 32045 -1 - 3417 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229928.peg.1664 CDS AZTR01000057.1 35775 35473 -3 - 303 FIG00696353: hypothetical protein - none -
fig|6666666.229928.peg.1665 CDS AZTR01000057.1 36445 35750 -1 - 696 FIG00696574: hypothetical protein - none -
fig|6666666.229928.peg.1666 CDS AZTR01000057.1 36833 36474 -2 - 360 Type II secretory pathway, component PulJ - none -
fig|6666666.229928.peg.1667 CDS AZTR01000057.1 37464 36847 -3 - 618 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229928.peg.1668 CDS AZTR01000057.1 38540 38073 -2 - 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229928.peg.1669 CDS AZTR01000057.1 39835 38555 -1 - 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229928.peg.1670 CDS AZTR01000057.1 41078 39870 -2 - 1209 TolA protein Ton and Tol transport systems
fig|6666666.229928.peg.1671 CDS AZTR01000057.1 41517 41095 -3 - 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229928.peg.1672 CDS AZTR01000057.1 42292 41603 -1 - 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229928.peg.1673 CDS AZTR01000057.1 42726 42322 -3 - 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229928.peg.1674 CDS AZTR01000057.1 42791 42910 2 + 120 hypothetical protein - none -
fig|6666666.229928.peg.1675 CDS AZTR01000057.1 44371 43235 -1 - 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229928.peg.1676 CDS AZTR01000057.1 45867 44386 -3 - 1482 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229928.peg.1677 CDS AZTR01000057.1 46403 46714 2 + 312 Chromosome segregation ATPases - none -
fig|6666666.229928.peg.1678 CDS AZTR01000057.1 47787 46768 -3 - 1020 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229928.peg.1679 CDS AZTR01000057.1 48410 47796 -2 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229928.peg.1680 CDS AZTR01000057.1 49046 48474 -2 - 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229928.peg.1681 CDS AZTR01000057.1 49512 49102 -3 - 411 excinuclease ABC subunit A - none -
fig|6666666.229928.peg.1682 CDS AZTR01000057.1 50264 49524 -2 - 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229928.peg.1683 CDS AZTR01000057.1 50669 50298 -2 - 372 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) Folate Biosynthesis
fig|6666666.229928.peg.1684 CDS AZTR01000057.1 52118 50850 -2 - 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229928.peg.1685 CDS AZTR01000057.1 52336 52476 1 + 141 hypothetical protein - none -
fig|6666666.229928.peg.1686 CDS AZTR01000057.1 54288 52510 -3 - 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229928.peg.1687 CDS AZTR01000057.1 55095 55820 3 + 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229928.peg.1688 CDS AZTR01000057.1 56247 56107 -3 - 141 transposase - none -
fig|6666666.229928.peg.1689 CDS AZTR01000057.1 59173 56516 -1 - 2658 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229928.peg.1690 CDS AZTR01000057.1 59404 59210 -1 - 195 hypothetical protein - none -
fig|6666666.229928.peg.1691 CDS AZTR01000058.1 287 1267 2 + 981 Mobile element protein - none -
fig|6666666.229928.peg.1692 CDS AZTR01000058.1 1267 1425 1 + 159 ATPase involved in DNA repair - none -
fig|6666666.229928.peg.1693 CDS AZTR01000058.1 4415 1848 -2 - 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229928.peg.1694 CDS AZTR01000058.1 5889 4558 -3 - 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229928.peg.1695 CDS AZTR01000058.1 6290 8242 2 + 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229928.peg.1696 CDS AZTR01000058.1 8401 8808 1 + 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229928.peg.1697 CDS AZTR01000058.1 8895 9548 3 + 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229928.peg.1698 CDS AZTR01000058.1 9900 11252 3 + 1353 Histidine permease YuiF - none -
fig|6666666.229928.peg.1699 CDS AZTR01000058.1 11316 11882 3 + 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229928.peg.1700 CDS AZTR01000058.1 13363 11939 -1 - 1425 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229928.peg.1701 CDS AZTR01000058.1 13471 13599 1 + 129 hypothetical protein - none -
fig|6666666.229928.peg.1702 CDS AZTR01000058.1 13707 13850 3 + 144 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) CBSS-87626.3.peg.3639;
Ubiquinone Biosynthesis
fig|6666666.229928.peg.1703 CDS AZTR01000058.1 15295 14564 -1 - 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229928.peg.1704 CDS AZTR01000058.1 16268 15297 -2 - 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229928.peg.1705 CDS AZTR01000058.1 16534 16845 1 + 312 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229928.peg.1706 CDS AZTR01000058.1 16866 17123 3 + 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229928.peg.1707 CDS AZTR01000058.1 17195 18127 2 + 933 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229928.peg.1708 CDS AZTR01000058.1 18205 19122 1 + 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229928.peg.1709 CDS AZTR01000058.1 19159 20334 1 + 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229928.peg.1710 CDS AZTR01000058.1 20450 20331 -2 - 120 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229928.peg.1711 CDS AZTR01000058.1 20884 20402 -1 - 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229928.peg.1712 CDS AZTR01000058.1 21229 21092 -1 - 138 hypothetical protein - none -
fig|6666666.229928.peg.1713 CDS AZTR01000058.1 21252 22100 3 + 849 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229928.peg.1714 CDS AZTR01000058.1 22177 22875 1 + 699 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229928.peg.1715 CDS AZTR01000058.1 22976 23896 2 + 921 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229928.peg.1716 CDS AZTR01000058.1 23906 24844 2 + 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229928.peg.1717 CDS AZTR01000058.1 24854 25837 2 + 984 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229928.peg.1718 CDS AZTR01000058.1 25834 26832 1 + 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229928.peg.1719 CDS AZTR01000058.1 27646 26939 -1 - 708 Aerobic respiration control protein arcA - none -
fig|6666666.229928.peg.1720 CDS AZTR01000058.1 28323 28057 -3 - 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229928.peg.1721 CDS AZTR01000058.1 29104 28535 -1 - 570 Lysine decarboxylase family - none -
fig|6666666.229928.peg.1722 CDS AZTR01000058.1 29247 31037 3 + 1791 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229928.peg.1723 CDS AZTR01000058.1 31139 31026 -2 - 114 hypothetical protein - none -
fig|6666666.229928.peg.1724 CDS AZTR01000058.1 31117 31506 1 + 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229928.peg.1725 CDS AZTR01000058.1 34786 31904 -1 - 2883 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229928.peg.1726 CDS AZTR01000058.1 35029 35151 1 + 123 hypothetical protein - none -
fig|6666666.229928.peg.1727 CDS AZTR01000058.1 35261 36220 2 + 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229928.peg.1728 CDS AZTR01000058.1 36634 36419 -1 - 216 Thioredoxin - none -
fig|6666666.229928.peg.1729 CDS AZTR01000058.1 37837 36842 -1 - 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229928.peg.1730 CDS AZTR01000058.1 38970 37861 -3 - 1110 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229928.peg.1731 CDS AZTR01000059.1 1795 263 -1 - 1533 Na+/H+ antiporter - none -
fig|6666666.229928.peg.1732 CDS AZTR01000059.1 2236 2634 1 + 399 DNA-binding protein H-NS - none -
fig|6666666.229928.peg.1733 CDS AZTR01000059.1 2686 3555 1 + 870 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229928.peg.1734 CDS AZTR01000059.1 3690 4319 3 + 630 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229928.peg.1735 CDS AZTR01000059.1 4426 6264 1 + 1839 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229928.peg.1736 CDS AZTR01000059.1 7343 6606 -2 - 738 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229928.peg.1737 CDS AZTR01000059.1 8534 7365 -2 - 1170 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229928.peg.1738 CDS AZTR01000059.1 9337 8540 -1 - 798 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229928.peg.1739 CDS AZTR01000059.1 10357 9359 -1 - 999 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229928.peg.1740 CDS AZTR01000059.1 10731 11981 3 + 1251 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229928.peg.1741 CDS AZTR01000060.1 1457 90 -2 - 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.1742 CDS AZTR01000060.1 1643 2719 2 + 1077 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229928.peg.1743 CDS AZTR01000060.1 3006 2785 -3 - 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229928.peg.1744 CDS AZTR01000060.1 3113 3808 2 + 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229928.peg.1745 CDS AZTR01000060.1 3921 5084 3 + 1164 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.229928.peg.1746 CDS AZTR01000061.1 74 847 2 + 774 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229928.peg.1747 CDS AZTR01000061.1 1021 860 -1 - 162 hypothetical protein - none -
fig|6666666.229928.peg.1748 CDS AZTR01000061.1 986 2197 2 + 1212 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229928.peg.1749 CDS AZTR01000061.1 2190 3113 3 + 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229928.peg.1750 CDS AZTR01000061.1 3969 3151 -3 - 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229928.peg.1751 CDS AZTR01000061.1 4256 5140 2 + 885 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229928.peg.1752 CDS AZTR01000061.1 5214 5621 3 + 408 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229928.peg.1753 CDS AZTR01000061.1 5672 6088 2 + 417 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229928.peg.1754 CDS AZTR01000061.1 7157 6222 -2 - 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229928.peg.1755 CDS AZTR01000061.1 7816 7166 -1 - 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229928.peg.1756 CDS AZTR01000061.1 8776 8102 -1 - 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229928.peg.1757 CDS AZTR01000061.1 9453 8779 -3 - 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229928.peg.1758 CDS AZTR01000061.1 9605 9883 2 + 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229928.peg.1759 CDS AZTR01000061.1 9883 10578 1 + 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229928.peg.1760 CDS AZTR01000061.1 10575 11054 3 + 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229928.peg.1761 CDS AZTR01000061.1 11051 12061 2 + 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229928.peg.1762 CDS AZTR01000061.1 12094 12834 1 + 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229928.peg.1763 CDS AZTR01000061.1 12862 13437 1 + 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229928.peg.1764 CDS AZTR01000061.1 13452 13643 3 + 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229928.peg.1765 CDS AZTR01000061.1 13660 14829 1 + 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229928.peg.1766 CDS AZTR01000061.1 15253 15074 -1 - 180 hypothetical protein - none -
fig|6666666.229928.peg.1767 CDS AZTR01000061.1 16287 15526 -3 - 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229928.peg.1768 CDS AZTR01000061.1 16386 17669 3 + 1284 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] - none -
fig|6666666.229928.peg.1769 CDS AZTR01000061.1 17670 18164 3 + 495 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229928.peg.1770 CDS AZTR01000061.1 18938 18213 -2 - 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229928.peg.1771 CDS AZTR01000061.1 19027 20070 1 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229928.peg.1772 CDS AZTR01000061.1 20508 20167 -3 - 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229928.peg.1773 CDS AZTR01000061.1 20612 21529 2 + 918 transcriptional regulator MtrA - none -
fig|6666666.229928.peg.1774 CDS AZTR01000061.1 21617 23461 2 + 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229928.peg.1775 CDS AZTR01000061.1 25940 23502 -2 - 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229928.peg.1776 CDS AZTR01000061.1 26148 26771 3 + 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229928.peg.1777 CDS AZTR01000061.1 26923 27300 1 + 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229928.peg.1778 CDS AZTR01000061.1 27287 27613 2 + 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229928.peg.1779 CDS AZTR01000061.1 27626 27856 2 + 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229928.peg.1780 CDS AZTR01000061.1 27872 28321 2 + 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome LSU bacterial
fig|6666666.229928.peg.1781 CDS AZTR01000061.1 28541 29659 2 + 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229928.peg.1782 CDS AZTR01000061.1 30798 29716 -3 - 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229928.peg.1783 CDS AZTR01000061.1 32474 31032 -2 - 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229928.peg.1784 CDS AZTR01000061.1 33544 32807 -1 - 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229928.peg.1785 CDS AZTR01000061.1 35946 33541 -3 - 2406 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229928.peg.1786 CDS AZTR01000061.1 36196 37251 1 + 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229928.peg.1787 CDS AZTR01000061.1 37321 38394 1 + 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229928.peg.1788 CDS AZTR01000061.1 38394 38882 3 + 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229928.peg.1789 CDS AZTR01000061.1 39342 38992 -3 - 351 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.229928.peg.1790 CDS AZTR01000061.1 40117 39368 -1 - 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229928.peg.1791 CDS AZTR01000061.1 40710 40183 -3 - 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229928.peg.1792 CDS AZTR01000061.1 40984 40736 -1 - 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229928.peg.1793 CDS AZTR01000061.1 41170 41325 1 + 156 hypothetical protein - none -
fig|6666666.229928.peg.1794 CDS AZTR01000061.1 42765 41479 -3 - 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229928.peg.1795 CDS AZTR01000061.1 43343 42795 -2 - 549 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229928.peg.1796 CDS AZTR01000061.1 43502 43828 2 + 327 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229928.peg.1797 CDS AZTR01000061.1 44122 44697 1 + 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229928.peg.1798 CDS AZTR01000061.1 45521 44733 -2 - 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229928.peg.1799 CDS AZTR01000061.1 45628 46602 1 + 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229928.peg.1800 CDS AZTR01000061.1 46604 47341 2 + 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229928.peg.1801 CDS AZTR01000061.1 48224 47511 -2 - 714 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229928.peg.1802 CDS AZTR01000061.1 49484 48228 -2 - 1257 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229928.peg.1803 CDS AZTR01000061.1 50208 49549 -3 - 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229928.peg.1804 CDS AZTR01000061.1 50618 50325 -2 - 294 COG1872 - none -
fig|6666666.229928.peg.1805 CDS AZTR01000061.1 51204 50644 -3 - 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229928.peg.1806 CDS AZTR01000061.1 52167 51220 -3 - 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229928.peg.1807 CDS AZTR01000061.1 53620 52820 -1 - 801 Orf2 - none -
fig|6666666.229928.peg.1808 CDS AZTR01000061.1 56872 53774 -1 - 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229928.peg.1809 CDS AZTR01000061.1 58076 56886 -2 - 1191 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229928.peg.1810 CDS AZTR01000061.1 58668 58102 -3 - 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229928.peg.1811 CDS AZTR01000061.1 59680 58868 -1 - 813 Cell division protein - none -
fig|6666666.229928.peg.1812 CDS AZTR01000061.1 62030 59790 -2 - 2241 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229928.peg.1813 CDS AZTR01000061.1 62215 63078 1 + 864 Involved in lipopolysaccharide biosynthesis - none -
fig|6666666.229928.peg.1814 CDS AZTR01000061.1 64089 63085 -3 - 1005 putative capsular polysaccharide synthesis protein - none -
fig|6666666.229928.peg.1815 CDS AZTR01000061.1 64946 64098 -2 - 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229928.peg.1816 CDS AZTR01000061.1 65204 65416 2 + 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229928.peg.1817 CDS AZTR01000061.1 65479 66171 1 + 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229928.peg.1818 CDS AZTR01000061.1 66172 67194 1 + 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229928.peg.1819 CDS AZTR01000061.1 67204 68256 1 + 1053 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229928.peg.1820 CDS AZTR01000061.1 69116 68259 -2 - 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229928.peg.1821 CDS AZTR01000061.1 69326 69156 -2 - 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229928.peg.1822 CDS AZTR01000061.1 69511 69338 -1 - 174 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.229928.peg.1823 CDS AZTR01000061.1 70442 69783 -2 - 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229928.peg.1824 CDS AZTR01000061.1 70621 70493 -1 - 129 hypothetical protein - none -
fig|6666666.229928.peg.1825 CDS AZTR01000061.1 70620 71819 3 + 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229928.peg.1826 CDS AZTR01000061.1 71888 72343 2 + 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229928.peg.1827 CDS AZTR01000061.1 72343 72942 1 + 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229928.peg.1828 CDS AZTR01000061.1 72966 73184 3 + 219 FIG00696234: hypothetical protein - none -
fig|6666666.229928.peg.1829 CDS AZTR01000061.1 73222 73866 1 + 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229928.peg.1830 CDS AZTR01000061.1 75369 73999 -3 - 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229928.peg.1831 CDS AZTR01000061.1 76309 75464 -1 - 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229928.peg.1832 CDS AZTR01000061.1 78971 76404 -2 - 2568 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229928.peg.1833 CDS AZTR01000061.1 79105 79917 1 + 813 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229928.peg.1834 CDS AZTR01000061.1 79928 80446 2 + 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229928.peg.1835 CDS AZTR01000061.1 80443 80967 1 + 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229928.peg.1836 CDS AZTR01000061.1 80967 81359 3 + 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229928.peg.1837 CDS AZTR01000061.1 81379 82788 1 + 1410 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229928.peg.1838 CDS AZTR01000061.1 83002 83529 1 + 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229928.peg.1839 CDS AZTR01000061.1 83553 84641 3 + 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229928.peg.1840 CDS AZTR01000061.1 84644 85498 2 + 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229928.peg.1841 CDS AZTR01000061.1 86083 85604 -1 - 480 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229928.peg.1842 CDS AZTR01000061.1 86254 89085 1 + 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229928.peg.1843 CDS AZTR01000061.1 89603 89154 -2 - 450 Mercuric resistance operon regulatory protein - none -
fig|6666666.229928.peg.1844 CDS AZTR01000061.1 89984 89673 -2 - 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229928.peg.1845 CDS AZTR01000061.1 90076 90393 1 + 318 hypothetical protein - none -
fig|6666666.229928.peg.1846 CDS AZTR01000061.1 90403 93165 1 + 2763 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229928.peg.1847 CDS AZTR01000061.1 93242 93646 2 + 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229928.peg.1848 CDS AZTR01000061.1 95172 94138 -3 - 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229928.peg.1849 CDS AZTR01000061.1 95675 95172 -2 - 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
Lipopolysaccharide assembly
fig|6666666.229928.peg.1850 CDS AZTR01000061.1 95664 95792 3 + 129 hypothetical protein - none -
fig|6666666.229928.peg.1851 CDS AZTR01000061.1 98405 95817 -2 - 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229928.peg.1852 CDS AZTR01000061.1 98572 98447 -1 - 126 hypothetical protein - none -
fig|6666666.229928.peg.1853 CDS AZTR01000061.1 99158 98526 -2 - 633 FIG00696423: hypothetical protein - none -
fig|6666666.229928.peg.1854 CDS AZTR01000061.1 99479 99186 -2 - 294 Uncharacterized protein HI0073 - none -
fig|6666666.229928.peg.1855 CDS AZTR01000061.1 99873 99463 -3 - 411 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229928.peg.1856 CDS AZTR01000061.1 100788 99961 -3 - 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229928.peg.1857 CDS AZTR01000061.1 101667 100804 -3 - 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229928.peg.1858 CDS AZTR01000061.1 102678 101746 -3 - 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229928.peg.1859 CDS AZTR01000061.1 103281 102745 -3 - 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229928.peg.1860 CDS AZTR01000061.1 103830 103420 -3 - 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229928.peg.1861 CDS AZTR01000061.1 103943 104554 2 + 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229928.peg.1862 CDS AZTR01000061.1 104578 105945 1 + 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229928.peg.1863 CDS AZTR01000061.1 106167 106916 3 + 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229928.peg.1864 CDS AZTR01000061.1 107437 107030 -1 - 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229928.peg.1865 CDS AZTR01000061.1 107576 108700 2 + 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229928.peg.1866 CDS AZTR01000061.1 108715 109545 1 + 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229928.peg.1867 CDS AZTR01000061.1 109881 110015 3 + 135 hypothetical protein - none -
fig|6666666.229928.peg.1868 CDS AZTR01000061.1 111545 110166 -2 - 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229928.peg.1869 CDS AZTR01000061.1 111699 112493 3 + 795 FIG001154: CcsA-related protein - none -
fig|6666666.229928.peg.1870 CDS AZTR01000061.1 112568 113830 2 + 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229928.peg.1871 CDS AZTR01000061.1 114005 114475 2 + 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229928.peg.1872 CDS AZTR01000061.1 114479 114925 2 + 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229928.peg.1873 CDS AZTR01000061.1 114935 115729 2 + 795 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229928.peg.1874 CDS AZTR01000061.1 116904 117041 3 + 138 hypothetical protein - none -
fig|6666666.229928.peg.1875 CDS AZTR01000061.1 117498 117647 3 + 150 hypothetical protein - none -
fig|6666666.229928.peg.1876 CDS AZTR01000061.1 118623 121043 3 + 2421 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229928.peg.1877 CDS AZTR01000061.1 121054 121677 1 + 624 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3) - none -
fig|6666666.229928.peg.1878 CDS AZTR01000061.1 121679 122518 2 + 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.5.3) - none -
fig|6666666.229928.peg.1879 CDS AZTR01000061.1 122566 123180 1 + 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229928.peg.1880 CDS AZTR01000061.1 123194 123355 2 + 162 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229928.peg.1881 CDS AZTR01000061.1 123547 124452 1 + 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229928.peg.1882 CDS AZTR01000061.1 124502 124762 2 + 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229928.peg.1883 CDS AZTR01000061.1 124929 125105 3 + 177 hypothetical protein - none -
fig|6666666.229928.peg.1884 CDS AZTR01000061.1 125310 126014 3 + 705 hypothetical protein - none -
fig|6666666.229928.peg.1885 CDS AZTR01000061.1 126096 128177 3 + 2082 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229928.peg.1886 CDS AZTR01000061.1 129411 128389 -3 - 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229928.peg.1887 CDS AZTR01000061.1 130194 129430 -3 - 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229928.peg.1888 CDS AZTR01000061.1 130894 130232 -1 - 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229928.peg.1889 CDS AZTR01000061.1 131122 130898 -1 - 225 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229928.peg.1890 CDS AZTR01000061.1 132397 131525 -1 - 873 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229928.peg.1891 CDS AZTR01000061.1 132881 132465 -2 - 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229928.peg.1892 CDS AZTR01000061.1 133553 132894 -2 - 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229928.peg.1893 CDS AZTR01000061.1 133592 134182 2 + 591 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229928.peg.1894 CDS AZTR01000061.1 135068 134187 -2 - 882 Transcriptional regulator, AraC family - none -
fig|6666666.229928.peg.1895 CDS AZTR01000061.1 135765 135139 -3 - 627 membrane protein ykgB - none -
fig|6666666.229928.peg.1896 CDS AZTR01000061.1 136134 138140 3 + 2007 oligopeptide transporter - none -
fig|6666666.229928.peg.1897 CDS AZTR01000061.1 138202 138630 1 + 429 hypothetical protein - none -
fig|6666666.229928.peg.1898 CDS AZTR01000061.1 138668 139477 2 + 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229928.peg.1899 CDS AZTR01000061.1 139500 141059 3 + 1560 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.229928.peg.1900 CDS AZTR01000061.1 141312 142010 3 + 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.229928.peg.1901 CDS AZTR01000061.1 142337 142765 2 + 429 FIG00848466: hypothetical protein - none -
fig|6666666.229928.peg.1902 CDS AZTR01000061.1 142880 143572 2 + 693 Aspartate racemase (EC 5.1.1.13) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229928.peg.1903 CDS AZTR01000061.1 143585 143839 2 + 255 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229928.peg.1904 CDS AZTR01000061.1 143919 144377 3 + 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229928.peg.1905 CDS AZTR01000061.1 144912 144766 -3 - 147 hypothetical protein - none -
fig|6666666.229928.peg.1906 CDS AZTR01000061.1 144933 146387 3 + 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229928.peg.1907 CDS AZTR01000061.1 148042 146798 -1 - 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1908 CDS AZTR01000061.1 148790 148062 -2 - 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1909 CDS AZTR01000061.1 149283 148840 -3 - 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1910 CDS AZTR01000061.1 150499 149276 -1 - 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1911 CDS AZTR01000061.1 151077 150508 -3 - 570 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1912 CDS AZTR01000061.1 153390 151117 -3 - 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1913 CDS AZTR01000061.1 153981 153397 -3 - 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1914 CDS AZTR01000061.1 154424 153978 -2 - 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1915 CDS AZTR01000061.1 155347 154421 -1 - 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1916 CDS AZTR01000061.1 156066 155344 -3 - 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1917 CDS AZTR01000061.1 157427 156066 -2 - 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1918 CDS AZTR01000061.1 157969 157424 -1 - 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1919 CDS AZTR01000061.1 159662 157995 -2 - 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1920 CDS AZTR01000061.1 159913 159662 -1 - 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1921 CDS AZTR01000061.1 160179 159916 -3 - 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1922 CDS AZTR01000061.1 160945 160157 -1 - 789 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1923 CDS AZTR01000061.1 161673 160930 -3 - 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229928.peg.1924 CDS AZTR01000061.1 162026 161703 -2 - 324 hypothetical protein - none -
fig|6666666.229928.peg.1925 CDS AZTR01000061.1 162054 162479 3 + 426 Excinuclease ATPase subunit - none -
fig|6666666.229928.peg.1926 CDS AZTR01000061.1 163293 162580 -3 - 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229928.peg.1927 CDS AZTR01000061.1 164197 163307 -1 - 891 Tyrosine recombinase XerC - none -
fig|6666666.229928.peg.1928 CDS AZTR01000061.1 165031 164207 -1 - 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229928.peg.1929 CDS AZTR01000061.1 165289 165110 -1 - 180 hypothetical protein - none -
fig|6666666.229928.peg.1930 CDS AZTR01000061.1 166317 165289 -3 - 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229928.peg.1931 CDS AZTR01000061.1 166500 167000 3 + 501 hypothetical protein - none -
fig|6666666.229928.peg.1932 CDS AZTR01000061.1 166973 167092 2 + 120 hypothetical protein - none -
fig|6666666.229928.peg.1933 CDS AZTR01000061.1 169672 167102 -1 - 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229928.peg.1934 CDS AZTR01000061.1 169937 170518 2 + 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229928.peg.1935 CDS AZTR01000061.1 171703 170591 -1 - 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229928.peg.1936 CDS AZTR01000061.1 172699 171887 -1 - 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229928.peg.1937 CDS AZTR01000061.1 172845 173531 3 + 687 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.229928.peg.1938 CDS AZTR01000061.1 173648 174232 2 + 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229928.peg.1939 CDS AZTR01000061.1 174580 174419 -1 - 162 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Riboflavin synthesis cluster
fig|6666666.229928.peg.1940 CDS AZTR01000061.1 176144 174729 -2 - 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229928.peg.1941 CDS AZTR01000061.1 176258 177892 2 + 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229928.peg.1942 CDS AZTR01000062.1 339 950 3 + 612 hypothetical protein - none -
fig|6666666.229928.peg.1943 CDS AZTR01000062.1 2189 2674 2 + 486 Ferritin-like protein 2 - none -
fig|6666666.229928.peg.1944 CDS AZTR01000062.1 2690 3187 2 + 498 Ferritin-like protein 2 - none -
fig|6666666.229928.peg.1945 CDS AZTR01000062.1 3419 3249 -2 - 171 hypothetical protein - none -
fig|6666666.229928.peg.1946 CDS AZTR01000062.1 3527 4300 2 + 774 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229928.peg.1947 CDS AZTR01000062.1 4419 5351 3 + 933 Universal stress protein E Universal stress protein family
fig|6666666.229928.peg.1948 CDS AZTR01000062.1 5478 6314 3 + 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229928.peg.1949 CDS AZTR01000062.1 7544 6399 -2 - 1146 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229928.peg.1950 CDS AZTR01000063.1 1957 1541 -1 - 417 COG0613, Predicted metal-dependent phosphoesterases (PHP family) tRNA modification Bacteria
fig|6666666.229928.peg.1951 CDS AZTR01000063.1 3076 2057 -1 - 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229928.peg.1952 CDS AZTR01000063.1 5758 3149 -1 - 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229928.peg.1953 CDS AZTR01000063.1 6180 7370 3 + 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229928.peg.1954 CDS AZTR01000063.1 7807 7421 -1 - 387 Transcriptional regulator, TetR family - none -
fig|6666666.229928.peg.1955 CDS AZTR01000063.1 7861 8037 1 + 177 hypothetical protein - none -
fig|6666666.229928.peg.1956 CDS AZTR01000063.1 8158 9117 1 + 960 HlyD family secretion protein - none -
fig|6666666.229928.peg.1957 CDS AZTR01000063.1 9120 11864 3 + 2745 ABC-type multidrug transport system, permease component - none -
fig|6666666.229928.peg.1958 CDS AZTR01000063.1 11866 12993 1 + 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229928.peg.1959 CDS AZTR01000063.1 13013 14431 2 + 1419 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229928.peg.1960 CDS AZTR01000063.1 14409 14540 3 + 132 hypothetical protein - none -
fig|6666666.229928.peg.1961 CDS AZTR01000063.1 14559 15578 3 + 1020 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229928.peg.1962 CDS AZTR01000063.1 15584 16372 2 + 789 Glutathione synthetase (EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229928.peg.1963 CDS AZTR01000063.1 16385 17419 2 + 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229928.peg.1964 CDS AZTR01000063.1 17501 17710 2 + 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229928.peg.1965 CDS AZTR01000063.1 19337 17829 -2 - 1509 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229928.peg.1966 CDS AZTR01000063.1 20225 19365 -2 - 861 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229928.peg.1967 CDS AZTR01000063.1 21069 20320 -3 - 750 ABC transporter ATP-binding protein - none -
fig|6666666.229928.peg.1968 CDS AZTR01000063.1 22079 21066 -2 - 1014 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229928.peg.1969 CDS AZTR01000063.1 23080 22079 -1 - 1002 ABC transporter, solute-binding protein - none -
fig|6666666.229928.peg.1970 CDS AZTR01000063.1 23291 23788 2 + 498 FIG00697418: hypothetical protein - none -
fig|6666666.229928.peg.1971 CDS AZTR01000063.1 23790 25802 3 + 2013 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229928.peg.1972 CDS AZTR01000063.1 26308 25892 -1 - 417 putative membrane protein - none -
fig|6666666.229928.peg.1973 CDS AZTR01000063.1 26449 27291 1 + 843 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Bacteria
fig|6666666.229928.peg.1974 CDS AZTR01000063.1 27288 27413 3 + 126 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Bacteria
fig|6666666.229928.peg.1975 CDS AZTR01000063.1 27876 27508 -3 - 369 Probable lipoprotein nlpC precursor - none -
fig|6666666.229928.peg.1976 CDS AZTR01000063.1 28344 28048 -3 - 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229928.peg.1977 CDS AZTR01000063.1 30738 28348 -3 - 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229928.peg.1978 CDS AZTR01000063.1 31747 30758 -1 - 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229928.peg.1979 CDS AZTR01000063.1 32779 32009 -1 - 771 Probable protease htpX homolog - none -
fig|6666666.229928.peg.1980 CDS AZTR01000064.1 660 1595 3 + 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) - none -
fig|6666666.229928.peg.1981 CDS AZTR01000064.1 1595 2149 2 + 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) - none -
fig|6666666.229928.peg.1982 CDS AZTR01000067.1 267 494 3 + 228 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229928.peg.1983 CDS AZTR01000067.1 572 817 2 + 246 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229928.peg.1984 CDS AZTR01000067.1 1601 1461 -2 - 141 hypothetical protein - none -
fig|6666666.229928.peg.1985 CDS AZTR01000069.1 281 1294 2 + 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229928.peg.1986 CDS AZTR01000069.1 1307 1828 2 + 522 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229928.peg.1987 CDS AZTR01000069.1 1828 2076 1 + 249 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229928.peg.1988 CDS AZTR01000069.1 2077 2532 1 + 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229928.peg.1989 CDS AZTR01000069.1 2762 3373 2 + 612 Stringent starvation protein A Carbon Starvation
fig|6666666.229928.peg.1990 CDS AZTR01000069.1 3385 3846 1 + 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229928.peg.1991 CDS AZTR01000069.1 5412 4009 -3 - 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.229928.peg.1992 CDS AZTR01000069.1 5608 6837 1 + 1230 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229928.peg.1993 CDS AZTR01000069.1 6914 7642 2 + 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229928.peg.1994 CDS AZTR01000069.1 8371 7730 -1 - 642 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229928.peg.1995 CDS AZTR01000070.1 1744 791 -1 - 954 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229928.peg.1996 CDS AZTR01000071.1 135 1361 3 + 1227 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229928.peg.1997 CDS AZTR01000071.1 1355 1639 2 + 285 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229928.peg.1998 CDS AZTR01000071.1 1648 2679 1 + 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229928.peg.1999 CDS AZTR01000071.1 2693 3697 2 + 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229928.peg.2000 CDS AZTR01000071.1 3722 4819 2 + 1098 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229928.peg.2001 CDS AZTR01000071.1 4843 5721 1 + 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229928.peg.2002 CDS AZTR01000071.1 5754 6056 3 + 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229928.peg.2003 CDS AZTR01000071.1 7566 6160 -3 - 1407 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229928.peg.2004 CDS AZTR01000071.1 8841 7852 -3 - 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229928.peg.2005 CDS AZTR01000071.1 10657 8972 -1 - 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229928.peg.2006 CDS AZTR01000071.1 11739 10933 -3 - 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229928.peg.2007 CDS AZTR01000071.1 12935 11742 -2 - 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229928.peg.2008 CDS AZTR01000071.1 13712 12945 -2 - 768 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229928.peg.2009 CDS AZTR01000071.1 14118 14882 3 + 765 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229928.peg.2010 CDS AZTR01000071.1 18391 17087 -1 - 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229928.peg.2011 CDS AZTR01000071.1 20198 18402 -2 - 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229928.peg.2012 CDS AZTR01000071.1 20480 20214 -2 - 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229928.peg.2013 CDS AZTR01000071.1 20672 20514 -2 - 159 hypothetical protein - none -
fig|6666666.229928.peg.2014 CDS AZTR01000071.1 20997 21374 3 + 378 hypothetical protein - none -
fig|6666666.229928.peg.2015 CDS AZTR01000071.1 21770 21495 -2 - 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229928.peg.2016 CDS AZTR01000071.1 22083 21919 -3 - 165 hypothetical protein - none -
fig|6666666.229928.peg.2017 CDS AZTR01000071.1 23610 22222 -3 - 1389 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229928.peg.2018 CDS AZTR01000072.1 760 903 1 + 144 hypothetical protein - none -
fig|6666666.229928.peg.2019 CDS AZTR01000072.1 1285 893 -1 - 393 putative - none -
fig|6666666.229928.peg.2020 CDS AZTR01000072.1 1948 1424 -1 - 525 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229928.rna.1 RNA AZTR01000003.1 75594 75521 -3 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.229928.rna.2 RNA AZTR01000003.1 75725 75652 -2 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.229928.rna.3 RNA AZTR01000003.1 75836 75746 -2 - 91 tRNA-Ser-GCT - none -
fig|6666666.229928.rna.4 RNA AZTR01000006.1 431 341 -2 - 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229928.rna.5 RNA AZTR01000007.1 3892 3820 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.229928.rna.6 RNA AZTR01000007.1 4031 3948 -2 - 84 tRNA-Leu-TAA - none -
fig|6666666.229928.rna.7 RNA AZTR01000007.1 4108 4036 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229928.rna.8 RNA AZTR01000008.1 155 1694 2 + 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229928.rna.9 RNA AZTR01000010.1 22242 22170 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229928.rna.10 RNA AZTR01000012.1 189 3231 3 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229928.rna.11 RNA AZTR01000012.1 3486 3601 3 + 116 5S RNA - none -
fig|6666666.229928.rna.12 RNA AZTR01000013.1 5156 5083 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.229928.rna.13 RNA AZTR01000018.1 15109 15195 1 + 87 tRNA-Ser-GGA tRNAs
fig|6666666.229928.rna.14 RNA AZTR01000018.1 33070 32998 -1 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.229928.rna.15 RNA AZTR01000018.1 33181 33108 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.229928.rna.16 RNA AZTR01000018.1 33307 33188 -1 - 120 5S RNA - none -
fig|6666666.229928.rna.17 RNA AZTR01000018.1 33445 33354 -1 - 92 5S RNA - none -
fig|6666666.229928.rna.18 RNA AZTR01000022.1 12273 12345 3 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.229928.rna.19 RNA AZTR01000022.1 12353 12425 2 + 73 tRNA-Asn-GTT - none -
fig|6666666.229928.rna.20 RNA AZTR01000025.1 116208 116136 -3 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.229928.rna.21 RNA AZTR01000025.1 118018 118090 1 + 73 tRNA-Val-TAC - none -
fig|6666666.229928.rna.22 RNA AZTR01000025.1 118132 118204 1 + 73 tRNA-Val-TAC - none -
fig|6666666.229928.rna.23 RNA AZTR01000025.1 118235 118307 2 + 73 tRNA-Val-TAC - none -
fig|6666666.229928.rna.24 RNA AZTR01000029.1 24199 24271 1 + 73 tRNA-Asn-GTT - none -
fig|6666666.229928.rna.25 RNA AZTR01000032.1 3516 3598 3 + 83 tRNA-Leu-CAA tRNAs
fig|6666666.229928.rna.26 RNA AZTR01000034.1 8230 8303 1 + 74 tRNA-Pro-TGG - none -
fig|6666666.229928.rna.27 RNA AZTR01000034.1 8340 8413 3 + 74 tRNA-Arg-TCT - none -
fig|6666666.229928.rna.28 RNA AZTR01000036.1 189 116 -3 - 74 tRNA-Pro-TGG - none -
fig|6666666.229928.rna.29 RNA AZTR01000036.1 267 195 -3 - 73 tRNA-His-GTG - none -
fig|6666666.229928.rna.30 RNA AZTR01000036.1 375 302 -3 - 74 tRNA-Arg-CCG tRNAs
fig|6666666.229928.rna.31 RNA AZTR01000042.1 53324 53397 2 + 74 tRNA-Met-CAT - none -
fig|6666666.229928.rna.32 RNA AZTR01000042.1 53406 53487 3 + 82 tRNA-Leu-TAG - none -
fig|6666666.229928.rna.33 RNA AZTR01000042.1 53520 53591 3 + 72 tRNA-Gln-TTG - none -
fig|6666666.229928.rna.34 RNA AZTR01000042.1 53632 53703 1 + 72 tRNA-Gln-TTG - none -
fig|6666666.229928.rna.35 RNA AZTR01000042.1 76524 76597 3 + 74 tRNA-Met-CAT - none -
fig|6666666.229928.rna.36 RNA AZTR01000049.1 44928 44845 -3 - 84 tRNA-Leu-CAG tRNAs
fig|6666666.229928.rna.37 RNA AZTR01000049.1 74671 74589 -1 - 83 tRNA-Leu-GAG tRNAs
fig|6666666.229928.rna.38 RNA AZTR01000049.1 146740 146813 1 + 74 tRNA-Met-CAT - none -
fig|6666666.229928.rna.39 RNA AZTR01000050.1 13442 13514 2 + 73 tRNA-Thr-TGT - none -
fig|6666666.229928.rna.40 RNA AZTR01000050.1 13548 13629 3 + 82 tRNA-Tyr-GTA - none -
fig|6666666.229928.rna.41 RNA AZTR01000050.1 13673 13744 2 + 72 tRNA-Gly-TCC - none -
fig|6666666.229928.rna.42 RNA AZTR01000050.1 13751 13823 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.229928.rna.43 RNA AZTR01000056.1 48772 48845 1 + 74 tRNA-Asp-GTC - none -
fig|6666666.229928.rna.44 RNA AZTR01000056.1 48871 48944 1 + 74 tRNA-Asp-GTC - none -
fig|6666666.229928.rna.45 RNA AZTR01000057.1 37653 37580 -3 - 74 tRNA-Lys-CTT - none -
fig|6666666.229928.rna.46 RNA AZTR01000057.1 37754 37682 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.229928.rna.47 RNA AZTR01000057.1 37856 37784 -2 - 73 tRNA-Lys-TTT - none -
fig|6666666.229928.rna.48 RNA AZTR01000058.1 31852 31766 -1 - 87 tRNA-Ser-TGA - none -
fig|6666666.229928.rna.49 RNA AZTR01000058.1 39207 39279 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229928.rna.50 RNA AZTR01000058.1 39291 39361 3 + 71 tRNA-Cys-GCA tRNAs
fig|6666666.229928.rna.51 RNA AZTR01000065.1 125 197 2 + 73 tRNA-Glu-TTC - none -
fig|6666666.229928.rna.52 RNA AZTR01000068.1 112 185 1 + 74 tRNA-Ile-GAT - none -
fig|6666666.229928.rna.53 RNA AZTR01000068.1 238 310 1 + 73 tRNA-Ala-TGC - none -