fig|6666666.229929.peg.1 CDS AZTP01000001.1 881 219 -2 - 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229929.peg.2 CDS AZTP01000001.1 1004 1216 2 + 213 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229929.peg.3 CDS AZTP01000001.1 2118 1609 -3 - 510 probable lipoprotein NlpC - none -
fig|6666666.229929.peg.4 CDS AZTP01000001.1 3141 2287 -3 - 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation;
KDO2-Lipid A biosynthesis
fig|6666666.229929.peg.5 CDS AZTP01000001.1 4050 3151 -3 - 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229929.peg.6 CDS AZTP01000001.1 5176 4094 -1 - 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229929.peg.7 CDS AZTP01000001.1 5770 5315 -1 - 456 Outer membrane lipoprotein - none -
fig|6666666.229929.peg.8 CDS AZTP01000001.1 6375 5812 -3 - 564 Protein yecM - none -
fig|6666666.229929.peg.9 CDS AZTP01000001.1 6496 8229 1 + 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229929.peg.10 CDS AZTP01000001.1 10031 8595 -2 - 1437 GTP-binding protein - none -
fig|6666666.229929.peg.11 CDS AZTP01000001.1 10309 12213 1 + 1905 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229929.peg.12 CDS AZTP01000001.1 13034 14173 2 + 1140 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229929.peg.13 CDS AZTP01000001.1 14320 14553 1 + 234 hypothetical protein - none -
fig|6666666.229929.peg.14 CDS AZTP01000001.1 14612 14836 2 + 225 hypothetical protein - none -
fig|6666666.229929.peg.15 CDS AZTP01000001.1 14918 14790 -2 - 129 hypothetical protein - none -
fig|6666666.229929.peg.16 CDS AZTP01000001.1 15258 14911 -3 - 348 Programmed cell death toxin ChpB - none -
fig|6666666.229929.peg.17 CDS AZTP01000001.1 15515 15258 -2 - 258 hypothetical protein - none -
fig|6666666.229929.peg.18 CDS AZTP01000001.1 16713 15661 -3 - 1053 outer membrane protein (porin) - none -
fig|6666666.229929.peg.19 CDS AZTP01000001.1 18117 16927 -3 - 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229929.peg.20 CDS AZTP01000001.1 18373 18930 1 + 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-316407.3.peg.1371;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.21 CDS AZTP01000001.1 19461 20294 3 + 834 Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like - none -
fig|6666666.229929.peg.22 CDS AZTP01000001.1 20300 21526 2 + 1227 Replicative DNA helicase (EC 3.6.1.-) in PFGI-1-like cluster - none -
fig|6666666.229929.peg.23 CDS AZTP01000001.1 22909 21920 -1 - 990 Chromosome segregation ATPases - none -
fig|6666666.229929.peg.24 CDS AZTP01000001.1 23041 23244 1 + 204 possible filamentous phage CTX RstR-like repressor - none -
fig|6666666.229929.peg.25 CDS AZTP01000001.1 23492 25525 2 + 2034 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster DNA topoisomerases, Type I, ATP-independent
fig|6666666.229929.peg.26 CDS AZTP01000001.1 26318 26530 2 + 213 hypothetical protein - none -
fig|6666666.229929.peg.27 CDS AZTP01000001.1 26615 27097 2 + 483 Putative uncharacterized protein STY4534 (Putative uncharacterized protein) - none -
fig|6666666.229929.peg.28 CDS AZTP01000001.1 27372 27938 3 + 567 putative membrane protein - none -
fig|6666666.229929.peg.29 CDS AZTP01000001.1 28163 28426 2 + 264 FIG00696053: hypothetical protein - none -
fig|6666666.229929.peg.30 CDS AZTP01000001.1 28489 28665 1 + 177 hypothetical protein - none -
fig|6666666.229929.peg.31 CDS AZTP01000001.1 28682 29071 2 + 390 FIG00696269: hypothetical protein - none -
fig|6666666.229929.peg.32 CDS AZTP01000001.1 29090 29464 2 + 375 FIG00696467: hypothetical protein - none -
fig|6666666.229929.peg.33 CDS AZTP01000001.1 29473 30111 1 + 639 Possible exported protein - none -
fig|6666666.229929.peg.34 CDS AZTP01000001.1 30111 30971 3 + 861 FIG00698030: hypothetical protein - none -
fig|6666666.229929.peg.35 CDS AZTP01000001.1 30982 32322 1 + 1341 putative exported protein - none -
fig|6666666.229929.peg.36 CDS AZTP01000001.1 32273 33061 2 + 789 putative membrane protein - none -
fig|6666666.229929.peg.37 CDS AZTP01000001.1 33898 33554 -1 - 345 hypothetical protein - none -
fig|6666666.229929.peg.38 CDS AZTP01000001.1 35912 33918 -2 - 1995 Tfp pilus assembly protein, pilus retraction ATPase PilT - none -
fig|6666666.229929.peg.39 CDS AZTP01000001.1 36848 35934 -2 - 915 FIG00696751: hypothetical protein - none -
fig|6666666.229929.peg.40 CDS AZTP01000001.1 37296 36856 -3 - 441 corresponds to STY4575 from Accession AL513382: Salmonella typhi CT18 - none -
fig|6666666.229929.peg.41 CDS AZTP01000001.1 37872 38012 3 + 141 hypothetical protein - none -
fig|6666666.229929.peg.42 CDS AZTP01000001.1 38107 38352 1 + 246 FIG00696456: hypothetical protein - none -
fig|6666666.229929.peg.43 CDS AZTP01000001.1 38488 38607 1 + 120 hypothetical protein - none -
fig|6666666.229929.peg.44 CDS AZTP01000001.1 40383 38728 -3 - 1656 hypothetical protein - none -
fig|6666666.229929.peg.45 CDS AZTP01000001.1 41678 40416 -2 - 1263 DNA-cytosine methyltransferase( EC:2.1.1.37 ) - none -
fig|6666666.229929.peg.46 CDS AZTP01000001.1 43068 42475 -3 - 594 DNA-invertase - none -
fig|6666666.229929.peg.47 CDS AZTP01000001.1 45142 44978 -1 - 165 hypothetical protein - none -
fig|6666666.229929.peg.48 CDS AZTP01000001.1 45607 45428 -1 - 180 Haemophilus-specific protein, uncharacterized - none -
fig|6666666.229929.peg.49 CDS AZTP01000001.1 45886 47772 1 + 1887 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229929.peg.50 CDS AZTP01000001.1 47856 48677 3 + 822 probable phage integrase - none -
fig|6666666.229929.peg.51 CDS AZTP01000001.1 49107 49496 3 + 390 Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like - none -
fig|6666666.229929.peg.52 CDS AZTP01000001.1 50552 49854 -2 - 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229929.peg.53 CDS AZTP01000001.1 51214 50567 -1 - 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229929.peg.54 CDS AZTP01000001.1 52806 51331 -3 - 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229929.peg.55 CDS AZTP01000002.1 157 321 1 + 165 hypothetical protein - none -
fig|6666666.229929.peg.56 CDS AZTP01000002.1 361 690 1 + 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229929.peg.57 CDS AZTP01000002.1 715 1395 1 + 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229929.peg.58 CDS AZTP01000002.1 1434 1757 3 + 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229929.peg.59 CDS AZTP01000002.1 1759 2928 1 + 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229929.peg.60 CDS AZTP01000002.1 3028 3684 1 + 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229929.peg.61 CDS AZTP01000002.1 3704 4936 2 + 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229929.peg.62 CDS AZTP01000002.1 5070 4933 -3 - 138 hypothetical protein - none -
fig|6666666.229929.peg.63 CDS AZTP01000002.1 5244 5654 3 + 411 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229929.peg.64 CDS AZTP01000002.1 5620 6291 1 + 672 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229929.peg.65 CDS AZTP01000002.1 7017 6376 -3 - 642 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229929.peg.66 CDS AZTP01000002.1 8429 7026 -2 - 1404 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229929.peg.67 CDS AZTP01000002.1 9288 8440 -3 - 849 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229929.peg.68 CDS AZTP01000002.1 10244 9300 -2 - 945 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229929.peg.69 CDS AZTP01000002.1 11299 10301 -1 - 999 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229929.peg.70 CDS AZTP01000002.1 12005 13306 2 + 1302 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229929.peg.71 CDS AZTP01000002.1 13330 15705 1 + 2376 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229929.peg.72 CDS AZTP01000002.1 15721 16476 1 + 756 Hexuronate utilization operon transcriptional repressor ExuR D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229929.peg.73 CDS AZTP01000002.1 16497 17210 3 + 714 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229929.peg.74 CDS AZTP01000002.1 17450 17668 2 + 219 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229929.peg.75 CDS AZTP01000002.1 17694 18629 3 + 936 hypothetical protein - none -
fig|6666666.229929.peg.76 CDS AZTP01000002.1 19138 19338 1 + 201 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229929.peg.77 CDS AZTP01000002.1 21337 19583 -1 - 1755 Putative sulfate permease - none -
fig|6666666.229929.peg.78 CDS AZTP01000002.1 21797 23017 2 + 1221 Phage integrase - none -
fig|6666666.229929.peg.79 CDS AZTP01000002.1 24160 24041 -1 - 120 hypothetical protein - none -
fig|6666666.229929.peg.80 CDS AZTP01000002.1 24204 26621 3 + 2418 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229929.peg.81 CDS AZTP01000002.1 29254 27404 -1 - 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229929.peg.82 CDS AZTP01000002.1 31087 29330 -1 - 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229929.peg.83 CDS AZTP01000002.1 31424 31209 -2 - 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229929.peg.84 CDS AZTP01000002.1 31459 31626 1 + 168 hypothetical protein - none -
fig|6666666.229929.peg.85 CDS AZTP01000002.1 31650 32678 3 + 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ;
YrdC-YciO-Sua5 protein family
fig|6666666.229929.peg.86 CDS AZTP01000002.1 32743 32976 1 + 234 unknown - none -
fig|6666666.229929.peg.87 CDS AZTP01000002.1 32979 33557 3 + 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229929.peg.88 CDS AZTP01000002.1 35641 33626 -1 - 2016 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229929.peg.89 CDS AZTP01000002.1 36882 35746 -3 - 1137 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229929.peg.90 CDS AZTP01000002.1 36927 37751 3 + 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229929.peg.91 CDS AZTP01000002.1 37853 38800 2 + 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229929.peg.92 CDS AZTP01000002.1 39143 39021 -2 - 123 hypothetical protein - none -
fig|6666666.229929.peg.93 CDS AZTP01000002.1 39834 39253 -3 - 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229929.peg.94 CDS AZTP01000002.1 41263 40172 -1 - 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229929.peg.95 CDS AZTP01000002.1 41899 41315 -1 - 585 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229929.peg.96 CDS AZTP01000003.1 161 823 2 + 663 FIGfam050825 CBSS-203122.12.peg.188
fig|6666666.229929.peg.97 CDS AZTP01000003.1 816 2735 3 + 1920 TniA putative transposase CBSS-203122.12.peg.188
fig|6666666.229929.peg.98 CDS AZTP01000003.1 2735 3628 2 + 894 TniB NTP-binding protein CBSS-203122.12.peg.188
fig|6666666.229929.peg.99 CDS AZTP01000003.1 3586 4704 1 + 1119 Mll9366 protein CBSS-203122.12.peg.188
fig|6666666.229929.peg.100 CDS AZTP01000003.1 4701 6116 3 + 1416 FIGfam110555 CBSS-203122.12.peg.188
fig|6666666.229929.peg.101 CDS AZTP01000003.1 6944 8524 2 + 1581 Recombinase - none -
fig|6666666.229929.peg.102 CDS AZTP01000003.1 8757 9314 3 + 558 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229929.peg.103 CDS AZTP01000003.1 9349 10161 1 + 813 Bll0873 protein - none -
fig|6666666.229929.peg.104 CDS AZTP01000003.1 11498 10983 -2 - 516 hypothetical protein - none -
fig|6666666.229929.peg.105 CDS AZTP01000003.1 16088 11502 -2 - 4587 FIG00696772: hypothetical protein - none -
fig|6666666.229929.peg.106 CDS AZTP01000003.1 16264 16088 -1 - 177 hypothetical protein - none -
fig|6666666.229929.peg.107 CDS AZTP01000003.1 16543 16298 -1 - 246 hypothetical protein - none -
fig|6666666.229929.peg.108 CDS AZTP01000003.1 17364 16555 -3 - 810 Phage FAD/FMN-containing dehydrogenase - none -
fig|6666666.229929.peg.109 CDS AZTP01000003.1 19102 17423 -1 - 1680 FIG00698772: hypothetical protein - none -
fig|6666666.229929.peg.110 CDS AZTP01000003.1 20089 19106 -1 - 984 hypothetical protein - none -
fig|6666666.229929.peg.111 CDS AZTP01000003.1 21045 20089 -3 - 957 Phage protein - none -
fig|6666666.229929.peg.112 CDS AZTP01000003.1 21604 21053 -1 - 552 Phage tail length tape-measure protein 1 # Enterobacteria-related - none -
fig|6666666.229929.peg.113 CDS AZTP01000003.1 21899 21579 -2 - 321 FIG00850495: hypothetical protein - none -
fig|6666666.229929.peg.114 CDS AZTP01000003.1 24414 21928 -3 - 2487 VgrG-3 protein - none -
fig|6666666.229929.peg.115 CDS AZTP01000003.1 24686 25345 2 + 660 Methyltransferase - none -
fig|6666666.229929.peg.116 CDS AZTP01000003.1 25361 26188 2 + 828 Thermostable 8-oxoguanine DNA glycosylase - none -
fig|6666666.229929.peg.117 CDS AZTP01000003.1 28672 27425 -1 - 1248 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229929.peg.118 CDS AZTP01000003.1 31008 29260 -3 - 1749 hypothetical protein - none -
fig|6666666.229929.peg.119 CDS AZTP01000003.1 31976 31110 -2 - 867 MG(2+) CHELATASE FAMILY PROTEIN CBSS-203122.12.peg.188
fig|6666666.229929.peg.120 CDS AZTP01000003.1 32705 32091 -2 - 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229929.peg.121 CDS AZTP01000003.1 32840 33715 2 + 876 Membrane protein LAPB - none -
fig|6666666.229929.peg.122 CDS AZTP01000003.1 34287 33811 -3 - 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) RNA methylation
fig|6666666.229929.peg.123 CDS AZTP01000003.1 34903 34406 -1 - 498 Phospholipid-binding protein - none -
fig|6666666.229929.peg.124 CDS AZTP01000003.1 35839 35009 -1 - 831 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229929.peg.125 CDS AZTP01000003.1 36551 35874 -2 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229929.peg.126 CDS AZTP01000003.1 37578 36541 -3 - 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229929.peg.127 CDS AZTP01000003.1 37644 37757 3 + 114 hypothetical protein - none -
fig|6666666.229929.peg.128 CDS AZTP01000003.1 37773 38330 3 + 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229929.peg.129 CDS AZTP01000004.1 694 305 -1 - 390 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.229929.peg.130 CDS AZTP01000004.1 1725 736 -3 - 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229929.peg.131 CDS AZTP01000004.1 2185 1754 -1 - 432 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229929.peg.132 CDS AZTP01000004.1 2793 2404 -3 - 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229929.peg.133 CDS AZTP01000004.1 3165 2809 -3 - 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229929.peg.134 CDS AZTP01000004.1 3420 3307 -3 - 114 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.229929.peg.135 CDS AZTP01000004.1 4771 3446 -1 - 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229929.peg.136 CDS AZTP01000004.1 5209 4775 -1 - 435 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.229929.peg.137 CDS AZTP01000004.1 5899 5399 -1 - 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229929.peg.138 CDS AZTP01000004.1 6268 5915 -1 - 354 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.229929.peg.139 CDS AZTP01000004.1 6815 6282 -2 - 534 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.229929.peg.140 CDS AZTP01000004.1 7223 6831 -2 - 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229929.peg.141 CDS AZTP01000004.1 7565 7260 -2 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229929.peg.142 CDS AZTP01000004.1 8006 7578 -2 - 429 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.229929.peg.143 CDS AZTP01000004.1 8446 8135 -1 - 312 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.229929.peg.144 CDS AZTP01000004.1 8828 8457 -2 - 372 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.229929.peg.145 CDS AZTP01000004.1 8970 9131 3 + 162 hypothetical protein - none -
fig|6666666.229929.peg.146 CDS AZTP01000004.1 9339 9082 -3 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229929.peg.147 CDS AZTP01000004.1 9530 9339 -2 - 192 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.229929.peg.148 CDS AZTP01000004.1 9940 9530 -1 - 411 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.229929.peg.149 CDS AZTP01000004.1 10661 9954 -2 - 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229929.peg.150 CDS AZTP01000004.1 11010 10678 -3 - 333 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.229929.peg.151 CDS AZTP01000004.1 11230 11021 -1 - 210 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229929.peg.152 CDS AZTP01000004.1 12142 11321 -1 - 822 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.229929.peg.153 CDS AZTP01000004.1 12465 12163 -3 - 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.229929.peg.154 CDS AZTP01000004.1 13064 12462 -2 - 603 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.229929.peg.155 CDS AZTP01000004.1 13706 13080 -2 - 627 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.229929.peg.156 CDS AZTP01000004.1 14034 13723 -3 - 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229929.peg.157 CDS AZTP01000004.1 14813 14346 -2 - 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229929.peg.158 CDS AZTP01000004.1 16432 14903 -1 - 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229929.peg.159 CDS AZTP01000004.1 17478 16546 -3 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229929.peg.160 CDS AZTP01000004.1 18492 17488 -3 - 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229929.peg.161 CDS AZTP01000006.1 256 606 1 + 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229929.peg.162 CDS AZTP01000006.1 607 960 1 + 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229929.peg.163 CDS AZTP01000006.1 962 2089 2 + 1128 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229929.peg.164 CDS AZTP01000006.1 2091 3266 3 + 1176 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229929.peg.165 CDS AZTP01000006.1 4335 3370 -3 - 966 6-phosphofructokinase (EC 2.7.1.11) D-Tagatose and Galactitol Utilization;
Glycolysis and Gluconeogenesis
fig|6666666.229929.peg.166 CDS AZTP01000006.1 5317 4397 -1 - 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229929.peg.167 CDS AZTP01000006.1 5883 5317 -3 - 567 FIG00696199: hypothetical protein - none -
fig|6666666.229929.peg.168 CDS AZTP01000006.1 6664 5885 -1 - 780 UPF0246 protein YaaA - none -
fig|6666666.229929.peg.169 CDS AZTP01000006.1 7354 6686 -1 - 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229929.peg.170 CDS AZTP01000006.1 7641 8024 3 + 384 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.229929.peg.171 CDS AZTP01000006.1 8130 8008 -3 - 123 hypothetical protein - none -
fig|6666666.229929.peg.172 CDS AZTP01000006.1 8193 9989 3 + 1797 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229929.peg.173 CDS AZTP01000006.1 10000 11022 1 + 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229929.peg.174 CDS AZTP01000006.1 11029 11709 1 + 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229929.peg.175 CDS AZTP01000006.1 11706 12614 3 + 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.229929.peg.176 CDS AZTP01000006.1 14083 12728 -1 - 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229929.peg.177 CDS AZTP01000006.1 14256 14116 -3 - 141 hypothetical protein - none -
fig|6666666.229929.peg.178 CDS AZTP01000006.1 15875 14286 -2 - 1590 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229929.peg.179 CDS AZTP01000006.1 16180 15917 -1 - 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229929.peg.180 CDS AZTP01000006.1 16470 16135 -3 - 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229929.peg.181 CDS AZTP01000006.1 16650 16516 -3 - 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.229929.peg.182 CDS AZTP01000006.1 17067 18428 3 + 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229929.peg.183 CDS AZTP01000006.1 18439 19539 1 + 1101 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229929.peg.184 CDS AZTP01000006.1 19543 20619 1 + 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229929.peg.185 CDS AZTP01000006.1 21385 20630 -1 - 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229929.peg.186 CDS AZTP01000006.1 21573 22148 3 + 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229929.peg.187 CDS AZTP01000006.1 22630 22307 -1 - 324 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229929.peg.188 CDS AZTP01000006.1 23507 22614 -2 - 894 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229929.peg.189 CDS AZTP01000006.1 24589 23504 -1 - 1086 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229929.peg.190 CDS AZTP01000006.1 25116 24586 -3 - 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229929.peg.191 CDS AZTP01000006.1 27223 25109 -1 - 2115 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229929.peg.192 CDS AZTP01000006.1 28574 27609 -2 - 966 NrfD protein - none -
fig|6666666.229929.peg.193 CDS AZTP01000006.1 29248 28571 -1 - 678 NrfC protein - none -
fig|6666666.229929.peg.194 CDS AZTP01000006.1 29949 29245 -3 - 705 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229929.peg.195 CDS AZTP01000006.1 31495 29972 -1 - 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229929.peg.196 CDS AZTP01000006.1 32359 32069 -1 - 291 hypothetical protein - none -
fig|6666666.229929.peg.197 CDS AZTP01000006.1 33000 32377 -3 - 624 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229929.peg.198 CDS AZTP01000006.1 34059 33136 -3 - 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229929.peg.199 CDS AZTP01000006.1 34508 34059 -2 - 450 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229929.peg.200 CDS AZTP01000006.1 35152 34607 -1 - 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229929.peg.201 CDS AZTP01000006.1 37139 35181 -2 - 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229929.peg.202 CDS AZTP01000006.1 37657 37139 -1 - 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229929.peg.203 CDS AZTP01000006.1 37860 37654 -3 - 207 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229929.peg.204 CDS AZTP01000006.1 38615 37878 -2 - 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229929.peg.205 CDS AZTP01000006.1 39291 38626 -3 - 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229929.peg.206 CDS AZTP01000006.1 39931 39296 -1 - 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229929.peg.207 CDS AZTP01000006.1 41296 40103 -1 - 1194 Bicyclomycin resistance protein - none -
fig|6666666.229929.peg.208 CDS AZTP01000006.1 42146 41301 -2 - 846 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229929.peg.209 CDS AZTP01000006.1 42220 44484 1 + 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229929.peg.210 CDS AZTP01000006.1 44628 45272 3 + 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229929.peg.211 CDS AZTP01000006.1 45679 46470 1 + 792 putative lipoprotein - none -
fig|6666666.229929.peg.212 CDS AZTP01000006.1 47500 46673 -1 - 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229929.peg.213 CDS AZTP01000006.1 47640 48083 3 + 444 FIG00904084: hypothetical protein - none -
fig|6666666.229929.peg.214 CDS AZTP01000006.1 48769 48173 -1 - 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.215 CDS AZTP01000006.1 48866 49219 2 + 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229929.peg.216 CDS AZTP01000006.1 49240 50670 1 + 1431 Transglycosylase, Slt family - none -
fig|6666666.229929.peg.217 CDS AZTP01000006.1 50682 50828 3 + 147 hypothetical protein - none -
fig|6666666.229929.peg.218 CDS AZTP01000006.1 51413 50874 -2 - 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229929.peg.219 CDS AZTP01000006.1 52981 51437 -1 - 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229929.peg.220 CDS AZTP01000006.1 53177 53908 2 + 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229929.peg.221 CDS AZTP01000006.1 55248 54034 -3 - 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229929.peg.222 CDS AZTP01000006.1 55365 56669 3 + 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229929.peg.223 CDS AZTP01000006.1 56660 58366 2 + 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229929.peg.224 CDS AZTP01000006.1 58419 59168 3 + 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229929.peg.225 CDS AZTP01000006.1 59264 59533 2 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229929.peg.226 CDS AZTP01000006.1 59741 60895 2 + 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229929.peg.227 CDS AZTP01000006.1 60966 61466 3 + 501 Protein sprT - none -
fig|6666666.229929.peg.228 CDS AZTP01000006.1 61623 62864 3 + 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229929.peg.229 CDS AZTP01000006.1 62957 64321 2 + 1365 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229929.peg.230 CDS AZTP01000006.1 65471 64422 -2 - 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229929.peg.231 CDS AZTP01000006.1 65522 65644 2 + 123 hypothetical protein - none -
fig|6666666.229929.peg.232 CDS AZTP01000006.1 65765 66904 2 + 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229929.peg.233 CDS AZTP01000006.1 66927 67478 3 + 552 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229929.peg.234 CDS AZTP01000006.1 67621 68670 1 + 1050 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229929.peg.235 CDS AZTP01000006.1 68682 69785 3 + 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229929.peg.236 CDS AZTP01000006.1 69807 71084 3 + 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229929.peg.237 CDS AZTP01000006.1 71095 71709 1 + 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229929.peg.238 CDS AZTP01000006.1 71763 72215 3 + 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229929.peg.239 CDS AZTP01000006.1 72925 72221 -1 - 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229929.peg.240 CDS AZTP01000006.1 73038 72922 -3 - 117 hypothetical protein - none -
fig|6666666.229929.peg.241 CDS AZTP01000006.1 74298 73045 -3 - 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229929.peg.242 CDS AZTP01000006.1 75048 74422 -3 - 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229929.peg.243 CDS AZTP01000006.1 77032 75185 -1 - 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229929.peg.244 CDS AZTP01000006.1 79439 77166 -2 - 2274 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229929.peg.245 CDS AZTP01000006.1 79672 81273 1 + 1602 Dca - none -
fig|6666666.229929.peg.246 CDS AZTP01000006.1 81383 81237 -2 - 147 hypothetical protein - none -
fig|6666666.229929.peg.247 CDS AZTP01000006.1 81532 82098 1 + 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229929.peg.248 CDS AZTP01000006.1 82108 83352 1 + 1245 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229929.peg.249 CDS AZTP01000006.1 83735 83412 -2 - 324 FIG074102: hypothetical protein - none -
fig|6666666.229929.peg.250 CDS AZTP01000006.1 84078 83728 -3 - 351 Phage-related protein - none -
fig|6666666.229929.peg.251 CDS AZTP01000006.1 85040 84195 -2 - 846 membrane protein, putative - none -
fig|6666666.229929.peg.252 CDS AZTP01000006.1 87272 85113 -2 - 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229929.peg.253 CDS AZTP01000006.1 87573 87361 -3 - 213 Copper chaperone Copper homeostasis
fig|6666666.229929.peg.254 CDS AZTP01000006.1 87668 88054 2 + 387 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229929.peg.255 CDS AZTP01000007.1 46 2628 1 + 2583 Glycosyltransferase - none -
fig|6666666.229929.peg.256 CDS AZTP01000007.1 3161 4108 2 + 948 O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-) - none -
fig|6666666.229929.peg.257 CDS AZTP01000007.1 4071 5489 3 + 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229929.peg.258 CDS AZTP01000007.1 6036 6839 3 + 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229929.peg.259 CDS AZTP01000007.1 6839 7633 2 + 795 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229929.peg.260 CDS AZTP01000007.1 7658 8686 2 + 1029 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229929.peg.261 CDS AZTP01000007.1 9504 8764 -3 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229929.peg.262 CDS AZTP01000007.1 10429 9776 -1 - 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229929.peg.263 CDS AZTP01000007.1 10518 11246 3 + 729 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229929.peg.264 CDS AZTP01000007.1 11297 12211 2 + 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229929.peg.265 CDS AZTP01000007.1 12852 12268 -3 - 585 Putative lipoprotein yceB precursor - none -
fig|6666666.229929.peg.266 CDS AZTP01000007.1 13015 13575 1 + 561 unknown - none -
fig|6666666.229929.peg.267 CDS AZTP01000007.1 13641 14381 3 + 741 serine/threonine protein kinase - none -
fig|6666666.229929.peg.268 CDS AZTP01000007.1 14378 14506 2 + 129 hypothetical protein - none -
fig|6666666.229929.peg.269 CDS AZTP01000007.1 15586 14720 -1 - 867 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.229929.peg.270 CDS AZTP01000007.1 17579 15846 -2 - 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229929.peg.271 CDS AZTP01000007.1 19342 17579 -1 - 1764 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229929.peg.272 CDS AZTP01000007.1 20399 19446 -2 - 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229929.peg.273 CDS AZTP01000007.1 21315 20458 -3 - 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229929.peg.274 CDS AZTP01000007.1 21619 21491 -1 - 129 hypothetical protein - none -
fig|6666666.229929.peg.275 CDS AZTP01000007.1 22467 21646 -3 - 822 Aldose 1-epimerase - none -
fig|6666666.229929.peg.276 CDS AZTP01000007.1 22544 24460 2 + 1917 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229929.peg.277 CDS AZTP01000007.1 24482 25204 2 + 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229929.peg.278 CDS AZTP01000007.1 25236 25793 3 + 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229929.peg.279 CDS AZTP01000007.1 25835 27385 2 + 1551 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) - none -
fig|6666666.229929.peg.280 CDS AZTP01000007.1 27358 27504 1 + 147 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) - none -
fig|6666666.229929.peg.281 CDS AZTP01000007.1 27571 28728 1 + 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229929.peg.282 CDS AZTP01000007.1 30201 28816 -3 - 1386 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229929.peg.283 CDS AZTP01000007.1 30541 30750 1 + 210 hypothetical protein - none -
fig|6666666.229929.peg.284 CDS AZTP01000007.1 31002 31229 3 + 228 hypothetical protein - none -
fig|6666666.229929.peg.285 CDS AZTP01000007.1 32000 32821 2 + 822 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229929.peg.286 CDS AZTP01000007.1 33346 34272 1 + 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229929.peg.287 CDS AZTP01000007.1 34295 34741 2 + 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229929.peg.288 CDS AZTP01000007.1 34750 35361 1 + 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229929.peg.289 CDS AZTP01000007.1 35361 35924 3 + 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229929.peg.290 CDS AZTP01000007.1 36917 35982 -2 - 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229929.peg.291 CDS AZTP01000007.1 37032 38462 3 + 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229929.peg.292 CDS AZTP01000007.1 38886 38506 -3 - 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229929.peg.293 CDS AZTP01000007.1 40082 38883 -2 - 1200 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229929.peg.294 CDS AZTP01000007.1 40588 40088 -1 - 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229929.peg.295 CDS AZTP01000007.1 41058 41417 3 + 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229929.peg.296 CDS AZTP01000007.1 41417 42109 2 + 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229929.peg.297 CDS AZTP01000007.1 42111 43463 3 + 1353 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.229929.peg.298 CDS AZTP01000007.1 43793 43500 -2 - 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229929.peg.299 CDS AZTP01000007.1 44097 43795 -3 - 303 FIG022160: hypothetical toxin - none -
fig|6666666.229929.peg.300 CDS AZTP01000007.1 44250 46151 3 + 1902 ABC transporter ATP-binding protein - none -
fig|6666666.229929.peg.301 CDS AZTP01000007.1 46731 46573 -3 - 159 hypothetical protein - none -
fig|6666666.229929.peg.302 CDS AZTP01000007.1 46722 47702 3 + 981 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229929.peg.303 CDS AZTP01000007.1 48047 48316 2 + 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229929.peg.304 CDS AZTP01000007.1 48340 49695 1 + 1356 FIG00732228: membrane protein - none -
fig|6666666.229929.peg.305 CDS AZTP01000007.1 49706 50530 2 + 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229929.peg.306 CDS AZTP01000007.1 50520 51464 3 + 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229929.peg.307 CDS AZTP01000007.1 52583 51633 -2 - 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p YrdC-YciO-Sua5 protein family
fig|6666666.229929.peg.308 CDS AZTP01000007.1 52646 53152 2 + 507 FIG001674: hypothetical protein - none -
fig|6666666.229929.peg.309 CDS AZTP01000007.1 55290 53149 -3 - 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229929.peg.310 CDS AZTP01000007.1 55772 55299 -2 - 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229929.peg.311 CDS AZTP01000007.1 56230 55772 -1 - 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229929.peg.312 CDS AZTP01000007.1 56973 56293 -3 - 681 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229929.peg.313 CDS AZTP01000007.1 57118 57390 1 + 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229929.peg.314 CDS AZTP01000007.1 58213 57365 -1 - 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229929.peg.315 CDS AZTP01000007.1 59067 58210 -3 - 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229929.peg.316 CDS AZTP01000007.1 59957 59067 -2 - 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229929.peg.317 CDS AZTP01000007.1 60838 59957 -1 - 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229929.peg.318 CDS AZTP01000007.1 61264 60935 -1 - 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) CBSS-326442.4.peg.1852;
Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229929.peg.319 CDS AZTP01000007.1 62169 61351 -3 - 819 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229929.peg.320 CDS AZTP01000007.1 62468 62746 2 + 279 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229929.peg.321 CDS AZTP01000007.1 62840 63436 2 + 597 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229929.peg.322 CDS AZTP01000007.1 63608 66322 2 + 2715 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229929.peg.323 CDS AZTP01000007.1 66437 67111 2 + 675 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229929.peg.324 CDS AZTP01000007.1 67108 68886 1 + 1779 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229929.peg.325 CDS AZTP01000007.1 68899 69765 1 + 867 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229929.peg.326 CDS AZTP01000007.1 69858 70448 3 + 591 O-methyltransferase - none -
fig|6666666.229929.peg.327 CDS AZTP01000007.1 70491 70730 3 + 240 hypothetical protein - none -
fig|6666666.229929.peg.328 CDS AZTP01000007.1 73925 71652 -2 - 2274 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229929.peg.329 CDS AZTP01000007.1 74087 74218 2 + 132 hypothetical protein - none -
fig|6666666.229929.peg.330 CDS AZTP01000007.1 74215 75147 1 + 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229929.peg.331 CDS AZTP01000007.1 75152 75880 2 + 729 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229929.peg.332 CDS AZTP01000007.1 75881 76213 2 + 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229929.peg.333 CDS AZTP01000007.1 77230 76280 -1 - 951 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229929.peg.334 CDS AZTP01000007.1 77526 77197 -3 - 330 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229929.peg.335 CDS AZTP01000007.1 77911 78801 1 + 891 Membrane protein LAPB - none -
fig|6666666.229929.peg.336 CDS AZTP01000007.1 78798 79478 3 + 681 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229929.peg.337 CDS AZTP01000007.1 79576 81222 1 + 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229929.peg.338 CDS AZTP01000007.1 81284 81571 2 + 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229929.peg.339 CDS AZTP01000007.1 81672 81968 3 + 297 Inner membrane protein yciS - none -
fig|6666666.229929.peg.340 CDS AZTP01000007.1 82022 83146 2 + 1125 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229929.peg.341 CDS AZTP01000007.1 83186 83878 2 + 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229929.peg.342 CDS AZTP01000007.1 83884 84201 1 + 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229929.peg.343 CDS AZTP01000007.1 84587 84237 -2 - 351 FIG00782386: hypothetical protein - none -
fig|6666666.229929.peg.344 CDS AZTP01000007.1 87327 84655 -3 - 2673 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229929.peg.345 CDS AZTP01000007.1 87935 87495 -2 - 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229929.peg.346 CDS AZTP01000007.1 88478 87954 -2 - 525 Flavodoxin 1 Flavodoxin
fig|6666666.229929.peg.347 CDS AZTP01000007.1 89695 88895 -1 - 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229929.peg.348 CDS AZTP01000007.1 89782 90399 1 + 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229929.peg.349 CDS AZTP01000007.1 90405 91820 3 + 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229929.peg.350 CDS AZTP01000007.1 91829 95152 2 + 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229929.peg.351 CDS AZTP01000007.1 95173 96246 1 + 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229929.peg.352 CDS AZTP01000007.1 96268 97140 1 + 873 Murein endopeptidase - none -
fig|6666666.229929.peg.353 CDS AZTP01000007.1 97144 97911 1 + 768 Putative membrane protein YfcA - none -
fig|6666666.229929.peg.354 CDS AZTP01000007.1 98234 99190 2 + 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229929.peg.355 CDS AZTP01000007.1 99212 99823 2 + 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229929.peg.356 CDS AZTP01000007.1 99856 101901 1 + 2046 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229929.peg.357 CDS AZTP01000007.1 101904 102794 3 + 891 hypothetical protein - none -
fig|6666666.229929.peg.358 CDS AZTP01000007.1 102937 103890 1 + 954 Glycosyltransferase - none -
fig|6666666.229929.peg.359 CDS AZTP01000008.1 1282 44 -1 - 1239 Permeases of the major facilitator superfamily - none -
fig|6666666.229929.peg.360 CDS AZTP01000008.1 1633 2631 1 + 999 PTS system, mannose-specific IIA component / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229929.peg.361 CDS AZTP01000008.1 2643 3446 3 + 804 PTS system, mannose-specific IIC component - none -
fig|6666666.229929.peg.362 CDS AZTP01000008.1 3461 4297 2 + 837 PTS system, mannose-specific IID component - none -
fig|6666666.229929.peg.363 CDS AZTP01000008.1 4696 4478 -1 - 219 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.364 CDS AZTP01000008.1 5168 4677 -2 - 492 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.365 CDS AZTP01000008.1 6078 5170 -3 - 909 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.366 CDS AZTP01000008.1 7352 6180 -2 - 1173 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.367 CDS AZTP01000008.1 8030 7521 -2 - 510 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.368 CDS AZTP01000008.1 9992 8067 -2 - 1926 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.369 CDS AZTP01000008.1 10523 10014 -2 - 510 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.370 CDS AZTP01000008.1 10823 10671 -2 - 153 hypothetical protein - none -
fig|6666666.229929.peg.371 CDS AZTP01000008.1 10828 11874 1 + 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229929.peg.372 CDS AZTP01000008.1 12370 11942 -1 - 429 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.229929.peg.373 CDS AZTP01000008.1 13785 12412 -3 - 1374 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229929.peg.374 CDS AZTP01000008.1 14671 13802 -1 - 870 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229929.peg.375 CDS AZTP01000008.1 16228 14687 -1 - 1542 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229929.peg.376 CDS AZTP01000008.1 16789 16241 -1 - 549 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229929.peg.377 CDS AZTP01000008.1 17273 16803 -2 - 471 ATP synthase F0 sector subunit b - none -
fig|6666666.229929.peg.378 CDS AZTP01000008.1 17577 17323 -3 - 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) - none -
fig|6666666.229929.peg.379 CDS AZTP01000008.1 18419 17631 -2 - 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229929.peg.380 CDS AZTP01000008.1 18821 18444 -2 - 378 FIG048548: ATP synthase protein I2 - none -
fig|6666666.229929.peg.381 CDS AZTP01000008.1 19552 18935 -1 - 618 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229929.peg.382 CDS AZTP01000008.1 19973 19611 -2 - 363 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229929.peg.383 CDS AZTP01000008.1 20128 20985 1 + 858 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229929.peg.384 CDS AZTP01000008.1 23106 21214 -3 - 1893 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229929.peg.385 CDS AZTP01000008.1 23973 23530 -3 - 444 Flavoprotein MioC Flavodoxin
fig|6666666.229929.peg.386 CDS AZTP01000008.1 24249 24031 -3 - 219 FIG074102: hypothetical protein - none -
fig|6666666.229929.peg.387 CDS AZTP01000008.1 24445 25362 1 + 918 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229929.peg.388 CDS AZTP01000008.1 25804 25400 -1 - 405 hypothetical protein - none -
fig|6666666.229929.peg.389 CDS AZTP01000008.1 25825 25956 1 + 132 hypothetical protein - none -
fig|6666666.229929.peg.390 CDS AZTP01000008.1 26816 26019 -2 - 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229929.peg.391 CDS AZTP01000008.1 27832 26819 -1 - 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.392 CDS AZTP01000008.1 28432 27920 -1 - 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229929.peg.393 CDS AZTP01000008.1 28870 28448 -1 - 423 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229929.peg.394 CDS AZTP01000008.1 29215 30537 1 + 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229929.peg.395 CDS AZTP01000008.1 30707 32455 2 + 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229929.peg.396 CDS AZTP01000008.1 32472 34106 3 + 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229929.peg.397 CDS AZTP01000008.1 34837 34217 -1 - 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229929.peg.398 CDS AZTP01000008.1 35748 34849 -3 - 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229929.peg.399 CDS AZTP01000008.1 35907 36635 3 + 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229929.peg.400 CDS AZTP01000008.1 36916 36695 -1 - 222 Protein SlyX - none -
fig|6666666.229929.peg.401 CDS AZTP01000008.1 37005 37730 3 + 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229929.peg.402 CDS AZTP01000008.1 37810 38478 1 + 669 YheO-like PAS domain - none -
fig|6666666.229929.peg.403 CDS AZTP01000008.1 38482 38859 1 + 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229929.peg.404 CDS AZTP01000008.1 38856 39218 3 + 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229929.peg.405 CDS AZTP01000008.1 39221 39508 2 + 288 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229929.peg.406 CDS AZTP01000008.1 40284 39517 -3 - 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229929.peg.407 CDS AZTP01000008.1 41016 40294 -3 - 723 ABC-type amino acid transport system, permease component - none -
fig|6666666.229929.peg.408 CDS AZTP01000008.1 41776 41000 -1 - 777 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229929.peg.409 CDS AZTP01000008.1 43197 41902 -3 - 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229929.peg.410 CDS AZTP01000008.1 44687 43323 -2 - 1365 lipoprotein, putative - none -
fig|6666666.229929.peg.411 CDS AZTP01000008.1 45746 44832 -2 - 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229929.peg.412 CDS AZTP01000008.1 46873 45743 -1 - 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229929.peg.413 CDS AZTP01000008.1 46959 48329 3 + 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229929.peg.414 CDS AZTP01000008.1 48851 48498 -2 - 354 Putative exported protein precursor - none -
fig|6666666.229929.peg.415 CDS AZTP01000008.1 49590 48871 -3 - 720 Putative exported protein precursor - none -
fig|6666666.229929.peg.416 CDS AZTP01000009.1 1622 549 -2 - 1074 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229929.peg.417 CDS AZTP01000009.1 1751 3034 2 + 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229929.peg.418 CDS AZTP01000009.1 5699 3108 -2 - 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229929.peg.419 CDS AZTP01000009.1 6565 5765 -1 - 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229929.peg.420 CDS AZTP01000009.1 6699 7040 3 + 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229929.peg.421 CDS AZTP01000009.1 7042 7314 1 + 273 putative cytoplasmic protein - none -
fig|6666666.229929.peg.422 CDS AZTP01000009.1 7343 9736 2 + 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229929.peg.423 CDS AZTP01000009.1 10043 11950 2 + 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229929.peg.424 CDS AZTP01000009.1 11993 12514 2 + 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229929.peg.425 CDS AZTP01000009.1 12653 14083 2 + 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229929.peg.426 CDS AZTP01000009.1 14086 15411 1 + 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229929.peg.427 CDS AZTP01000009.1 15398 16537 2 + 1140 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229929.peg.428 CDS AZTP01000009.1 16539 17210 3 + 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229929.peg.429 CDS AZTP01000009.1 17200 17691 1 + 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229929.peg.430 CDS AZTP01000009.1 17698 18006 1 + 309 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229929.peg.431 CDS AZTP01000009.1 18095 17982 -2 - 114 hypothetical protein - none -
fig|6666666.229929.peg.432 CDS AZTP01000010.1 2089 1499 -1 - 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.433 CDS AZTP01000010.1 2670 2089 -3 - 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.434 CDS AZTP01000010.1 3747 2860 -3 - 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229929.peg.435 CDS AZTP01000010.1 4238 3771 -2 - 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229929.peg.436 CDS AZTP01000010.1 4494 5429 3 + 936 Malate dehydrogenase (EC 1.1.1.37) TCA Cycle
fig|6666666.229929.peg.437 CDS AZTP01000010.1 6318 5578 -3 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229929.peg.438 CDS AZTP01000010.1 7161 6685 -3 - 477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229929.peg.439 CDS AZTP01000010.1 7592 7158 -2 - 435 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229929.peg.440 CDS AZTP01000010.1 8054 8959 2 + 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229929.peg.441 CDS AZTP01000010.1 8979 10040 3 + 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229929.peg.442 CDS AZTP01000010.1 10192 10022 -1 - 171 hypothetical protein - none -
fig|6666666.229929.peg.443 CDS AZTP01000010.1 10158 10610 3 + 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229929.peg.444 CDS AZTP01000010.1 10610 11734 2 + 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229929.peg.445 CDS AZTP01000010.1 11743 12771 1 + 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229929.peg.446 CDS AZTP01000010.1 12780 13376 3 + 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229929.peg.447 CDS AZTP01000010.1 14840 13443 -2 - 1398 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229929.peg.448 CDS AZTP01000010.1 15784 15005 -1 - 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229929.peg.449 CDS AZTP01000010.1 16013 16777 2 + 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229929.peg.450 CDS AZTP01000010.1 16856 17584 2 + 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229929.peg.451 CDS AZTP01000010.1 17571 18632 3 + 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229929.peg.452 CDS AZTP01000010.1 20267 18777 -2 - 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229929.peg.453 CDS AZTP01000010.1 20404 21522 1 + 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229929.peg.454 CDS AZTP01000010.1 21527 22594 2 + 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229929.peg.455 CDS AZTP01000010.1 22769 23653 2 + 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.229929.peg.456 CDS AZTP01000011.1 281 108 -2 - 174 hypothetical protein - none -
fig|6666666.229929.peg.457 CDS AZTP01000011.1 1519 506 -1 - 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229929.peg.458 CDS AZTP01000011.1 2631 1519 -3 - 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229929.peg.459 CDS AZTP01000011.1 3470 2658 -2 - 813 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229929.peg.460 CDS AZTP01000011.1 4173 3550 -3 - 624 ATPase component NikO of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229929.peg.461 CDS AZTP01000011.1 4835 4170 -2 - 666 Transmembrane component NikQ of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229929.peg.462 CDS AZTP01000011.1 5485 4841 -1 - 645 Substrate-specific component NikM of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229929.peg.463 CDS AZTP01000011.1 5988 5485 -3 - 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229929.peg.464 CDS AZTP01000011.1 6690 5995 -3 - 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229929.peg.465 CDS AZTP01000011.1 7565 6873 -2 - 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229929.peg.466 CDS AZTP01000011.1 8229 7582 -3 - 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229929.peg.467 CDS AZTP01000011.1 9983 8262 -2 - 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229929.peg.468 CDS AZTP01000011.1 10679 9996 -2 - 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229929.peg.469 CDS AZTP01000011.1 10738 10926 1 + 189 hypothetical protein - none -
fig|6666666.229929.peg.470 CDS AZTP01000011.1 10940 11947 2 + 1008 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229929.peg.471 CDS AZTP01000011.1 12158 13666 2 + 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229929.peg.472 CDS AZTP01000011.1 13932 14282 3 + 351 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229929.peg.473 CDS AZTP01000011.1 14288 14917 2 + 630 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229929.peg.474 CDS AZTP01000011.1 15023 15139 2 + 117 hypothetical protein - none -
fig|6666666.229929.peg.475 CDS AZTP01000011.1 15142 15897 1 + 756 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229929.peg.476 CDS AZTP01000011.1 16000 16209 1 + 210 FIG050068: DNA-binding protein - none -
fig|6666666.229929.peg.477 CDS AZTP01000011.1 16178 16312 2 + 135 FIG050068: DNA-binding protein - none -
fig|6666666.229929.peg.478 CDS AZTP01000011.1 16379 17167 2 + 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229929.peg.479 CDS AZTP01000011.1 17239 19218 1 + 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229929.peg.480 CDS AZTP01000011.1 19816 19334 -1 - 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229929.peg.481 CDS AZTP01000011.1 20002 21162 1 + 1161 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229929.peg.482 CDS AZTP01000011.1 21172 22689 1 + 1518 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229929.peg.483 CDS AZTP01000011.1 22806 23087 3 + 282 HipB protein Persister Cells
fig|6666666.229929.peg.484 CDS AZTP01000011.1 23215 23102 -1 - 114 hypothetical protein - none -
fig|6666666.229929.peg.485 CDS AZTP01000011.1 23275 23394 1 + 120 HipA protein Persister Cells
fig|6666666.229929.peg.486 CDS AZTP01000011.1 23628 23933 3 + 306 HipA protein Persister Cells
fig|6666666.229929.peg.487 CDS AZTP01000011.1 23897 24010 2 + 114 hypothetical protein - none -
fig|6666666.229929.peg.488 CDS AZTP01000011.1 24116 24307 2 + 192 HipA protein Persister Cells
fig|6666666.229929.peg.489 CDS AZTP01000011.1 25378 24302 -1 - 1077 Type II restriction enzyme HpaII (EC 3.1.21.4) - none -
fig|6666666.229929.peg.490 CDS AZTP01000011.1 26454 25375 -3 - 1080 DNA-cytosine methyltransferase (EC 2.1.1.37) DNA repair, bacterial
fig|6666666.229929.peg.491 CDS AZTP01000011.1 29776 26912 -1 - 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229929.peg.492 CDS AZTP01000011.1 30856 29786 -1 - 1071 Transcriptional regulators - none -
fig|6666666.229929.peg.493 CDS AZTP01000011.1 31058 30891 -2 - 168 RNA-binding domain protein - none -
fig|6666666.229929.peg.494 CDS AZTP01000011.1 31659 31072 -3 - 588 FIG00696806: hypothetical protein - none -
fig|6666666.229929.peg.495 CDS AZTP01000011.1 31819 31649 -1 - 171 hypothetical protein - none -
fig|6666666.229929.peg.496 CDS AZTP01000011.1 32353 31901 -1 - 453 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229929.peg.497 CDS AZTP01000011.1 32563 33957 1 + 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229929.peg.498 CDS AZTP01000011.1 34061 34666 2 + 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229929.peg.499 CDS AZTP01000011.1 34910 34674 -2 - 237 YcfP protein: probably an esterase that is part of a salvage cluster - none -
fig|6666666.229929.peg.500 CDS AZTP01000011.1 35796 34981 -3 - 816 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229929.peg.501 CDS AZTP01000011.1 36621 35887 -3 - 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229929.peg.502 CDS AZTP01000011.1 36749 37012 2 + 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229929.peg.503 CDS AZTP01000011.1 37286 37161 -2 - 126 hypothetical protein - none -
fig|6666666.229929.peg.504 CDS AZTP01000011.1 37680 38894 3 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229929.peg.505 CDS AZTP01000011.1 39672 38977 -3 - 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229929.peg.506 CDS AZTP01000011.1 40526 39666 -2 - 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229929.peg.507 CDS AZTP01000011.1 41314 40565 -1 - 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229929.peg.508 CDS AZTP01000011.1 42497 41406 -2 - 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229929.peg.509 CDS AZTP01000011.1 42844 44616 1 + 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229929.peg.510 CDS AZTP01000011.1 44671 45132 1 + 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229929.peg.511 CDS AZTP01000011.1 45209 45883 2 + 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229929.peg.512 CDS AZTP01000011.1 48350 45993 -2 - 2358 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229929.peg.513 CDS AZTP01000011.1 49487 48471 -2 - 1017 Putative membrane protein YeiH - none -
fig|6666666.229929.peg.514 CDS AZTP01000011.1 55424 49653 -2 - 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229929.peg.515 CDS AZTP01000011.1 56923 55475 -1 - 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229929.peg.516 CDS AZTP01000011.1 58081 57236 -1 - 846 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229929.peg.517 CDS AZTP01000011.1 58695 58078 -3 - 618 ABC transporter ATP-binding protein - none -
fig|6666666.229929.peg.518 CDS AZTP01000011.1 59498 58695 -2 - 804 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229929.peg.519 CDS AZTP01000011.1 60204 59467 -3 - 738 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229929.peg.520 CDS AZTP01000013.1 1047 40 -3 - 1008 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229929.peg.521 CDS AZTP01000013.1 1204 2577 1 + 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229929.peg.522 CDS AZTP01000013.1 2769 2906 3 + 138 hypothetical protein - none -
fig|6666666.229929.peg.523 CDS AZTP01000013.1 2951 4069 2 + 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229929.peg.524 CDS AZTP01000013.1 4054 4839 1 + 786 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway - none -
fig|6666666.229929.peg.525 CDS AZTP01000013.1 4939 5958 1 + 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229929.peg.526 CDS AZTP01000013.1 6086 6898 2 + 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229929.peg.527 CDS AZTP01000013.1 7466 6975 -2 - 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229929.peg.528 CDS AZTP01000013.1 8421 7477 -3 - 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229929.peg.529 CDS AZTP01000013.1 8497 9174 1 + 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229929.peg.530 CDS AZTP01000013.1 9547 9284 -1 - 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229929.peg.531 CDS AZTP01000013.1 9828 11393 3 + 1566 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229929.peg.532 CDS AZTP01000013.1 11471 12397 2 + 927 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229929.peg.533 CDS AZTP01000013.1 12529 12777 1 + 249 FIG01055344: hypothetical protein - none -
fig|6666666.229929.peg.534 CDS AZTP01000013.1 12815 15637 2 + 2823 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229929.peg.535 CDS AZTP01000013.1 15719 16213 2 + 495 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229929.peg.536 CDS AZTP01000013.1 16213 17157 1 + 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229929.peg.537 CDS AZTP01000013.1 17455 17595 1 + 141 hypothetical protein - none -
fig|6666666.229929.peg.538 CDS AZTP01000013.1 18907 17609 -1 - 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229929.peg.539 CDS AZTP01000013.1 19964 19071 -2 - 894 Tyrosine recombinase XerD - none -
fig|6666666.229929.peg.540 CDS AZTP01000013.1 21058 19961 -1 - 1098 Probable 3-phenylpropionic acid transporter - none -
fig|6666666.229929.peg.541 CDS AZTP01000013.1 21942 21127 -3 - 816 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229929.peg.542 CDS AZTP01000013.1 22005 22910 3 + 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229929.peg.543 CDS AZTP01000013.1 23376 23002 -3 - 375 opacity associated protein - none -
fig|6666666.229929.peg.544 CDS AZTP01000013.1 24757 23438 -1 - 1320 Cell envelope opacity-associated protein A - none -
fig|6666666.229929.peg.545 CDS AZTP01000013.1 25947 24928 -3 - 1020 Lysine 2,3-aminomutase (EC 5.4.3.2) - none -
fig|6666666.229929.peg.546 CDS AZTP01000013.1 26025 26546 3 + 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229929.peg.547 CDS AZTP01000013.1 26876 28252 2 + 1377 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229929.peg.548 CDS AZTP01000013.1 28414 29628 1 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229929.peg.549 CDS AZTP01000013.1 30370 29693 -1 - 678 YheO-like PAS domain - none -
fig|6666666.229929.peg.550 CDS AZTP01000013.1 30849 30433 -3 - 417 Arabinose efflux permease - none -
fig|6666666.229929.peg.551 CDS AZTP01000013.1 31663 30932 -1 - 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229929.peg.552 CDS AZTP01000013.1 31774 32517 1 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.553 CDS AZTP01000013.1 32525 33937 2 + 1413 Putative cell division protein precursor - none -
fig|6666666.229929.peg.554 CDS AZTP01000013.1 34873 34010 -1 - 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229929.peg.555 CDS AZTP01000013.1 35755 35015 -1 - 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229929.peg.556 CDS AZTP01000013.1 36104 35817 -2 - 288 hypothetical protein - none -
fig|6666666.229929.peg.557 CDS AZTP01000013.1 38510 36198 -2 - 2313 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.229929.peg.558 CDS AZTP01000013.1 39463 38612 -1 - 852 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229929.peg.559 CDS AZTP01000014.1 4 774 1 + 771 Probable protease htpX homolog - none -
fig|6666666.229929.peg.560 CDS AZTP01000014.1 1035 2024 3 + 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229929.peg.561 CDS AZTP01000014.1 2044 4434 1 + 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229929.peg.562 CDS AZTP01000014.1 4438 4734 1 + 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229929.peg.563 CDS AZTP01000014.1 4787 5275 2 + 489 Probable lipoprotein nlpC precursor - none -
fig|6666666.229929.peg.564 CDS AZTP01000014.1 6335 5370 -2 - 966 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Bacteria
fig|6666666.229929.peg.565 CDS AZTP01000014.1 6476 6892 2 + 417 putative membrane protein - none -
fig|6666666.229929.peg.566 CDS AZTP01000014.1 7526 6981 -2 - 546 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229929.peg.567 CDS AZTP01000014.1 8993 7539 -2 - 1455 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229929.peg.568 CDS AZTP01000014.1 9492 8995 -3 - 498 FIG00697418: hypothetical protein - none -
fig|6666666.229929.peg.569 CDS AZTP01000014.1 9699 10706 3 + 1008 ABC transporter, solute-binding protein - none -
fig|6666666.229929.peg.570 CDS AZTP01000014.1 10706 10921 2 + 216 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229929.peg.571 CDS AZTP01000014.1 10927 11718 1 + 792 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229929.peg.572 CDS AZTP01000014.1 11715 12464 3 + 750 ABC transporter ATP-binding protein - none -
fig|6666666.229929.peg.573 CDS AZTP01000014.1 12651 14945 3 + 2295 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229929.peg.574 CDS AZTP01000014.1 15286 15077 -1 - 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229929.peg.575 CDS AZTP01000014.1 16403 15369 -2 - 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229929.peg.576 CDS AZTP01000014.1 17216 16416 -2 - 801 Glutathione synthetase (EC 6.3.2.3) Cluster containing Glutathione synthetase;
Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229929.peg.577 CDS AZTP01000014.1 18202 17216 -1 - 987 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229929.peg.578 CDS AZTP01000014.1 19791 18376 -3 - 1416 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229929.peg.579 CDS AZTP01000014.1 20938 19811 -1 - 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229929.peg.580 CDS AZTP01000014.1 23669 20940 -2 - 2730 ABC-type multidrug transport system, permease component - none -
fig|6666666.229929.peg.581 CDS AZTP01000014.1 24304 23672 -1 - 633 HlyD family secretion protein - none -
fig|6666666.229929.peg.582 CDS AZTP01000014.1 24642 24358 -3 - 285 HlyD family secretion protein - none -
fig|6666666.229929.peg.583 CDS AZTP01000014.1 24790 25350 1 + 561 Transcriptional regulator, TetR family - none -
fig|6666666.229929.peg.584 CDS AZTP01000014.1 25489 26304 1 + 816 hypothetical protein - none -
fig|6666666.229929.peg.585 CDS AZTP01000014.1 26310 26756 3 + 447 hypothetical protein - none -
fig|6666666.229929.peg.586 CDS AZTP01000014.1 26884 27261 1 + 378 hypothetical protein - none -
fig|6666666.229929.peg.587 CDS AZTP01000014.1 27271 29454 1 + 2184 hypothetical protein - none -
fig|6666666.229929.peg.588 CDS AZTP01000014.1 29860 29600 -1 - 261 hypothetical protein - none -
fig|6666666.229929.peg.589 CDS AZTP01000014.1 30048 29923 -3 - 126 hypothetical protein - none -
fig|6666666.229929.peg.590 CDS AZTP01000014.1 31235 30045 -2 - 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229929.peg.591 CDS AZTP01000014.1 31442 31567 2 + 126 hypothetical protein - none -
fig|6666666.229929.peg.592 CDS AZTP01000014.1 31658 34267 2 + 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229929.peg.593 CDS AZTP01000014.1 34340 35359 2 + 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229929.peg.594 CDS AZTP01000014.1 35360 36208 2 + 849 COG0613, Predicted metal-dependent phosphoesterases (PHP family) YrdC-YciO-Sua5 protein family;
tRNA modification Bacteria
fig|6666666.229929.peg.595 CDS AZTP01000014.1 37148 36252 -2 - 897 Transcriptional regulator - none -
fig|6666666.229929.peg.596 CDS AZTP01000014.1 37247 39853 2 + 2607 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229929.peg.597 CDS AZTP01000014.1 40775 39939 -2 - 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229929.peg.598 CDS AZTP01000014.1 41835 40903 -3 - 933 Universal stress protein E Universal stress protein family
fig|6666666.229929.peg.599 CDS AZTP01000014.1 42727 41954 -1 - 774 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229929.peg.600 CDS AZTP01000014.1 42835 43002 1 + 168 hypothetical protein - none -
fig|6666666.229929.peg.601 CDS AZTP01000014.1 43561 43064 -1 - 498 Ferritin-like protein 2 - none -
fig|6666666.229929.peg.602 CDS AZTP01000014.1 44064 43579 -3 - 486 Ferritin-like protein 2 - none -
fig|6666666.229929.peg.603 CDS AZTP01000015.1 980 153 -2 - 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229929.peg.604 CDS AZTP01000015.1 1508 1011 -2 - 498 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229929.peg.605 CDS AZTP01000015.1 3582 1501 -3 - 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229929.peg.606 CDS AZTP01000015.1 5704 3584 -1 - 2121 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229929.peg.607 CDS AZTP01000015.1 6016 5750 -1 - 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229929.peg.608 CDS AZTP01000015.1 6711 6073 -3 - 639 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229929.peg.609 CDS AZTP01000015.1 6952 7956 1 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229929.peg.610 CDS AZTP01000015.1 8467 8051 -1 - 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229929.peg.611 CDS AZTP01000015.1 8540 8971 2 + 432 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229929.peg.612 CDS AZTP01000015.1 8964 9257 3 + 294 UPF0125 protein yfjF - none -
fig|6666666.229929.peg.613 CDS AZTP01000015.1 9291 10484 3 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229929.peg.614 CDS AZTP01000015.1 10489 11823 1 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229929.peg.615 CDS AZTP01000015.1 12683 11829 -2 - 855 Hypothetical ATP-binding protein UPF0042, contains P-loop - none -
fig|6666666.229929.peg.616 CDS AZTP01000015.1 13245 12712 -3 - 534 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229929.peg.617 CDS AZTP01000015.1 13974 13249 -3 - 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229929.peg.618 CDS AZTP01000015.1 14498 13980 -2 - 519 LptA, protein essential for LPS transport across the periplasm KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229929.peg.619 CDS AZTP01000015.1 15054 14479 -3 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229929.peg.620 CDS AZTP01000015.1 15690 15457 -3 - 234 hypothetical protein - none -
fig|6666666.229929.peg.621 CDS AZTP01000015.1 16269 16000 -3 - 270 hypothetical protein - none -
fig|6666666.229929.peg.622 CDS AZTP01000015.1 17217 16501 -3 - 717 hypothetical protein - none -
fig|6666666.229929.peg.623 CDS AZTP01000015.1 17661 17395 -3 - 267 FIG00697940: hypothetical protein - none -
fig|6666666.229929.peg.624 CDS AZTP01000015.1 17782 18576 1 + 795 possible DNA-binding protein - none -
fig|6666666.229929.peg.625 CDS AZTP01000015.1 19058 18873 -2 - 186 hypothetical protein - none -
fig|6666666.229929.peg.626 CDS AZTP01000015.1 19230 20027 3 + 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229929.peg.627 CDS AZTP01000015.1 20021 20806 2 + 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229929.peg.628 CDS AZTP01000015.1 20829 21338 3 + 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229929.peg.629 CDS AZTP01000015.1 21367 22008 1 + 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229929.peg.630 CDS AZTP01000015.1 22102 22371 1 + 270 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229929.peg.631 CDS AZTP01000015.1 22371 22628 3 + 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229929.peg.632 CDS AZTP01000015.1 22645 23916 1 + 1272 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229929.peg.633 CDS AZTP01000016.1 76 1083 1 + 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229929.peg.634 CDS AZTP01000016.1 1123 1410 1 + 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229929.peg.635 CDS AZTP01000016.1 1407 2282 3 + 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229929.peg.636 CDS AZTP01000016.1 2297 3799 2 + 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229929.peg.637 CDS AZTP01000016.1 3974 5386 2 + 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229929.peg.638 CDS AZTP01000016.1 5373 6806 3 + 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229929.peg.639 CDS AZTP01000016.1 7084 8583 1 + 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229929.peg.640 CDS AZTP01000016.1 9879 8845 -3 - 1035 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229929.peg.641 CDS AZTP01000016.1 11027 9873 -2 - 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229929.peg.642 CDS AZTP01000017.1 1066 125 -1 - 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229929.peg.643 CDS AZTP01000017.1 1229 2716 2 + 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229929.peg.644 CDS AZTP01000017.1 2732 3760 2 + 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229929.peg.645 CDS AZTP01000017.1 3766 5223 1 + 1458 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229929.peg.646 CDS AZTP01000017.1 7589 5274 -2 - 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229929.peg.647 CDS AZTP01000017.1 8694 7807 -3 - 888 RuBisCO operon transcriptional regulator CO2 uptake, carboxysome
fig|6666666.229929.peg.648 CDS AZTP01000017.1 8804 10273 2 + 1470 Sodium-dependent transporter - none -
fig|6666666.229929.peg.649 CDS AZTP01000017.1 10285 10884 1 + 600 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229929.peg.650 CDS AZTP01000017.1 11209 11021 -1 - 189 hypothetical protein - none -
fig|6666666.229929.peg.651 CDS AZTP01000017.1 11326 11210 -1 - 117 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229929.peg.652 CDS AZTP01000017.1 11494 11336 -1 - 159 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229929.peg.653 CDS AZTP01000017.1 11624 12106 2 + 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229929.peg.654 CDS AZTP01000017.1 12380 12189 -2 - 192 hypothetical protein - none -
fig|6666666.229929.peg.655 CDS AZTP01000017.1 12982 12395 -1 - 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229929.peg.656 CDS AZTP01000017.1 13449 13168 -3 - 282 hypothetical protein - none -
fig|6666666.229929.peg.657 CDS AZTP01000017.1 13710 14447 3 + 738 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229929.peg.658 CDS AZTP01000017.1 15770 14523 -2 - 1248 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229929.peg.659 CDS AZTP01000017.1 17168 15783 -2 - 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229929.peg.660 CDS AZTP01000017.1 17942 17196 -2 - 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229929.peg.661 CDS AZTP01000017.1 18881 17955 -2 - 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229929.peg.662 CDS AZTP01000017.1 19037 21538 2 + 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229929.peg.663 CDS AZTP01000017.1 21548 22177 2 + 630 Nitrate/nitrite response regulator protein - none -
fig|6666666.229929.peg.664 CDS AZTP01000017.1 22244 24103 2 + 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229929.peg.665 CDS AZTP01000017.1 24131 28012 2 + 3882 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229929.peg.666 CDS AZTP01000018.1 1283 138 -2 - 1146 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229929.peg.667 CDS AZTP01000018.1 1571 1690 2 + 120 hypothetical protein - none -
fig|6666666.229929.peg.668 CDS AZTP01000018.1 1760 2896 2 + 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229929.peg.669 CDS AZTP01000018.1 4032 2941 -3 - 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229929.peg.670 CDS AZTP01000018.1 4662 4123 -3 - 540 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229929.peg.671 CDS AZTP01000018.1 5419 4778 -1 - 642 ABC-type Fe3+-hydroxamate transport system, periplasmic component - none -
fig|6666666.229929.peg.672 CDS AZTP01000018.1 6285 5431 -3 - 855 NgrB - none -
fig|6666666.229929.peg.673 CDS AZTP01000018.1 7275 6295 -3 - 981 NgrB - none -
fig|6666666.229929.peg.674 CDS AZTP01000018.1 7536 7285 -3 - 252 hypothetical protein - none -
fig|6666666.229929.peg.675 CDS AZTP01000018.1 7668 7549 -3 - 120 hypothetical protein - none -
fig|6666666.229929.peg.676 CDS AZTP01000018.1 8040 7669 -3 - 372 transcriptional regulator, putative - none -
fig|6666666.229929.peg.677 CDS AZTP01000018.1 8442 8107 -3 - 336 transcriptional regulator, putative - none -
fig|6666666.229929.peg.678 CDS AZTP01000018.1 8848 8729 -1 - 120 hypothetical protein - none -
fig|6666666.229929.peg.679 CDS AZTP01000018.1 10352 8964 -2 - 1389 Putative protease - none -
fig|6666666.229929.peg.680 CDS AZTP01000018.1 10425 10553 3 + 129 hypothetical protein - none -
fig|6666666.229929.peg.681 CDS AZTP01000018.1 11494 10520 -1 - 975 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229929.peg.682 CDS AZTP01000018.1 11759 11625 -2 - 135 hypothetical protein - none -
fig|6666666.229929.peg.683 CDS AZTP01000018.1 11924 12262 2 + 339 conserved hypothetical protein - none -
fig|6666666.229929.peg.684 CDS AZTP01000018.1 12613 12323 -1 - 291 StbE replicon stabilization toxin - none -
fig|6666666.229929.peg.685 CDS AZTP01000018.1 12860 12603 -2 - 258 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.686 CDS AZTP01000018.1 14066 13305 -2 - 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229929.peg.687 CDS AZTP01000018.1 14134 14601 1 + 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229929.peg.688 CDS AZTP01000018.1 14723 14583 -2 - 141 hypothetical protein - none -
fig|6666666.229929.peg.689 CDS AZTP01000018.1 14865 15164 3 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229929.peg.690 CDS AZTP01000018.1 15195 17045 3 + 1851 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229929.peg.691 CDS AZTP01000018.1 17026 18027 1 + 1002 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229929.peg.692 CDS AZTP01000018.1 18258 20885 3 + 2628 Iron siderophore receptor protein - none -
fig|6666666.229929.peg.693 CDS AZTP01000018.1 21104 20964 -2 - 141 hypothetical protein - none -
fig|6666666.229929.peg.694 CDS AZTP01000018.1 21234 23855 3 + 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229929.peg.695 CDS AZTP01000018.1 24890 23937 -2 - 954 Inositol transport system permease protein Inositol catabolism
fig|6666666.229929.peg.696 CDS AZTP01000018.1 26447 24942 -2 - 1506 Inositol transport system ATP-binding protein Inositol catabolism
fig|6666666.229929.peg.697 CDS AZTP01000018.1 27364 26516 -1 - 849 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229929.peg.698 CDS AZTP01000018.1 28468 27530 -1 - 939 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229929.peg.699 CDS AZTP01000018.1 29397 28771 -3 - 627 Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229929.peg.700 CDS AZTP01000018.1 29910 29467 -3 - 444 Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229929.peg.701 CDS AZTP01000018.1 31509 30001 -3 - 1509 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) Inositol catabolism
fig|6666666.229929.peg.702 CDS AZTP01000018.1 33090 31747 -3 - 1344 putative hexose phosphate transport protein - none -
fig|6666666.229929.peg.703 CDS AZTP01000018.1 33911 33108 -2 - 804 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229929.peg.704 CDS AZTP01000019.1 74 799 2 + 726 5-deoxy-glucuronate isomerase (EC 5.3.1.-) Inositol catabolism
fig|6666666.229929.peg.705 CDS AZTP01000019.1 924 1757 3 + 834 Predicted transcriptional regulator of the myo-inositol catabolic operon Inositol catabolism
fig|6666666.229929.peg.706 CDS AZTP01000019.1 3703 1796 -1 - 1908 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain Inositol catabolism;
Inositol catabolism
fig|6666666.229929.peg.707 CDS AZTP01000019.1 4012 5958 1 + 1947 Epi-inositol hydrolase (EC 3.7.1.-) Inositol catabolism
fig|6666666.229929.peg.708 CDS AZTP01000019.1 6014 6910 2 + 897 Inosose dehydratase (EC 4.2.1.44) Inositol catabolism
fig|6666666.229929.peg.709 CDS AZTP01000019.1 6913 7923 1 + 1011 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229929.peg.710 CDS AZTP01000019.1 8540 8028 -2 - 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229929.peg.711 CDS AZTP01000019.1 9763 8615 -1 - 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229929.peg.712 CDS AZTP01000019.1 11721 9841 -3 - 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229929.peg.713 CDS AZTP01000019.1 13564 12131 -1 - 1434 RTX toxin transporter, determinant D # Leukotoxin secretion protein D - none -
fig|6666666.229929.peg.714 CDS AZTP01000019.1 15702 13579 -3 - 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229929.peg.715 CDS AZTP01000019.1 18938 15771 -2 - 3168 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229929.peg.716 CDS AZTP01000019.1 19457 18951 -2 - 507 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229929.peg.717 CDS AZTP01000019.1 21827 20565 -2 - 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine Biosynthesis;
YrdC-YciO-Sua5 protein family
fig|6666666.229929.peg.718 CDS AZTP01000019.1 22504 21962 -1 - 543 hypothetical protein - none -
fig|6666666.229929.peg.719 CDS AZTP01000019.1 23033 22884 -2 - 150 hypothetical protein - none -
fig|6666666.229929.peg.720 CDS AZTP01000019.1 24124 23120 -1 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229929.peg.721 CDS AZTP01000019.1 24180 24629 3 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229929.peg.722 CDS AZTP01000019.1 24639 25082 3 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229929.peg.723 CDS AZTP01000019.1 28464 25084 -3 - 3381 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229929.peg.724 CDS AZTP01000019.1 28812 28510 -3 - 303 FIG00696353: hypothetical protein - none -
fig|6666666.229929.peg.725 CDS AZTP01000019.1 29482 28787 -1 - 696 FIG00696574: hypothetical protein - none -
fig|6666666.229929.peg.726 CDS AZTP01000019.1 30195 29479 -3 - 717 Type II secretory pathway, component PulJ - none -
fig|6666666.229929.peg.727 CDS AZTP01000019.1 30826 30209 -1 - 618 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229929.peg.728 CDS AZTP01000019.1 31798 31331 -1 - 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229929.peg.729 CDS AZTP01000019.1 33093 31813 -3 - 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229929.peg.730 CDS AZTP01000019.1 34204 33128 -1 - 1077 TolA protein Ton and Tol transport systems
fig|6666666.229929.peg.731 CDS AZTP01000019.1 34757 34335 -2 - 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229929.peg.732 CDS AZTP01000019.1 35532 34843 -3 - 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229929.peg.733 CDS AZTP01000019.1 35966 35562 -2 - 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229929.peg.734 CDS AZTP01000019.1 36207 36082 -3 - 126 FIG00362582: hypothetical protein - none -
fig|6666666.229929.peg.735 CDS AZTP01000019.1 37620 36484 -3 - 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229929.peg.736 CDS AZTP01000019.1 39200 37635 -2 - 1566 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229929.peg.737 CDS AZTP01000019.1 39690 39974 3 + 285 Chromosome segregation ATPases - none -
fig|6666666.229929.peg.738 CDS AZTP01000019.1 41042 40029 -2 - 1014 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229929.peg.739 CDS AZTP01000019.1 41671 41057 -1 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229929.peg.740 CDS AZTP01000019.1 42307 41735 -1 - 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229929.peg.741 CDS AZTP01000019.1 42773 42363 -2 - 411 excinuclease ABC subunit A - none -
fig|6666666.229929.peg.742 CDS AZTP01000019.1 43525 42785 -1 - 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229929.peg.743 CDS AZTP01000019.1 43930 43559 -1 - 372 Dihydroneopterin triphosphate pyrophosphohydolase type 2 Queuosine-Archaeosine Biosynthesis
fig|6666666.229929.peg.744 CDS AZTP01000019.1 45379 44111 -1 - 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229929.peg.745 CDS AZTP01000020.1 221 2371 2 + 2151 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229929.peg.746 CDS AZTP01000020.1 3466 2426 -1 - 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229929.peg.747 CDS AZTP01000020.1 5483 3450 -2 - 2034 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229929.peg.748 CDS AZTP01000020.1 6511 5483 -1 - 1029 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229929.peg.749 CDS AZTP01000020.1 6709 6539 -1 - 171 hypothetical protein - none -
fig|6666666.229929.peg.750 CDS AZTP01000020.1 7004 7339 2 + 336 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.751 CDS AZTP01000020.1 8301 7795 -3 - 507 hypothetical protein - none -
fig|6666666.229929.peg.752 CDS AZTP01000020.1 8780 9502 2 + 723 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.753 CDS AZTP01000020.1 9592 9852 1 + 261 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229929.peg.754 CDS AZTP01000020.1 9842 11068 2 + 1227 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.755 CDS AZTP01000020.1 11074 12156 1 + 1083 Anticodon nuclease - none -
fig|6666666.229929.peg.756 CDS AZTP01000020.1 12160 12324 1 + 165 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229929.peg.757 CDS AZTP01000020.1 12435 12632 3 + 198 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.758 CDS AZTP01000020.1 12637 15564 1 + 2928 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.759 CDS AZTP01000020.1 15551 15727 2 + 177 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.760 CDS AZTP01000020.1 15867 18137 3 + 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229929.peg.761 CDS AZTP01000020.1 18242 18682 2 + 441 hypothetical protein - none -
fig|6666666.229929.peg.762 CDS AZTP01000020.1 18785 19915 2 + 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229929.peg.763 CDS AZTP01000020.1 20269 20517 1 + 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229929.peg.764 CDS AZTP01000020.1 20589 20470 -3 - 120 hypothetical protein - none -
fig|6666666.229929.peg.765 CDS AZTP01000020.1 21441 20629 -3 - 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229929.peg.766 CDS AZTP01000020.1 22086 21463 -3 - 624 L-lysine permease - none -
fig|6666666.229929.peg.767 CDS AZTP01000020.1 22586 22086 -2 - 501 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229929.peg.768 CDS AZTP01000020.1 23579 22596 -2 - 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229929.peg.769 CDS AZTP01000020.1 24023 23598 -2 - 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229929.peg.770 CDS AZTP01000020.1 24503 24030 -2 - 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229929.peg.771 CDS AZTP01000020.1 24749 25633 2 + 885 hypothetical protein - none -
fig|6666666.229929.peg.772 CDS AZTP01000020.1 25646 25843 2 + 198 putative membrane protein - none -
fig|6666666.229929.peg.773 CDS AZTP01000020.1 27604 25955 -1 - 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229929.peg.774 CDS AZTP01000020.1 28702 27620 -1 - 1083 Alanine racemase, biosynthetic (EC 5.1.1.1) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229929.peg.775 CDS AZTP01000020.1 30132 28726 -3 - 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229929.peg.776 CDS AZTP01000020.1 30147 30260 3 + 114 hypothetical protein - none -
fig|6666666.229929.peg.777 CDS AZTP01000020.1 31362 30283 -3 - 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229929.peg.778 CDS AZTP01000020.1 32713 31463 -1 - 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229929.peg.779 CDS AZTP01000020.1 33399 32713 -3 - 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229929.peg.780 CDS AZTP01000020.1 34599 33415 -3 - 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229929.peg.781 CDS AZTP01000020.1 35307 34978 -3 - 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229929.peg.782 CDS AZTP01000020.1 36409 35465 -1 - 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229929.peg.783 CDS AZTP01000020.1 37131 36565 -3 - 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229929.peg.784 CDS AZTP01000020.1 37234 38208 1 + 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229929.peg.785 CDS AZTP01000020.1 38211 38798 3 + 588 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229929.peg.786 CDS AZTP01000020.1 40742 39204 -2 - 1539 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229929.peg.787 CDS AZTP01000020.1 41163 40798 -3 - 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229929.peg.788 CDS AZTP01000020.1 41287 43326 1 + 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229929.peg.789 CDS AZTP01000020.1 43952 43452 -2 - 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229929.peg.790 CDS AZTP01000020.1 45740 44013 -2 - 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229929.peg.791 CDS AZTP01000020.1 46128 45871 -3 - 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229929.peg.792 CDS AZTP01000020.1 47389 46349 -1 - 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229929.peg.793 CDS AZTP01000020.1 47460 48008 3 + 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229929.peg.794 CDS AZTP01000020.1 48528 50042 3 + 1515 Dca - none -
fig|6666666.229929.peg.795 CDS AZTP01000020.1 50071 50688 1 + 618 Glycerate kinase (EC 2.7.1.31) Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization
fig|6666666.229929.peg.796 CDS AZTP01000020.1 50675 52183 2 + 1509 FIG00732228: membrane protein - none -
fig|6666666.229929.peg.797 CDS AZTP01000020.1 52191 53111 3 + 921 RfbJ protein - none -
fig|6666666.229929.peg.798 CDS AZTP01000020.1 54864 54739 -3 - 126 hypothetical protein - none -
fig|6666666.229929.peg.799 CDS AZTP01000021.1 2570 1374 -2 - 1197 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) Rhamnose containing glycans;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229929.peg.800 CDS AZTP01000021.1 3366 2572 -3 - 795 Teichoic acid translocation permease protein TagG Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229929.peg.801 CDS AZTP01000021.1 3922 3383 -1 - 540 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229929.peg.802 CDS AZTP01000021.1 4803 3925 -3 - 879 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229929.peg.803 CDS AZTP01000021.1 5595 4804 -3 - 792 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229929.peg.804 CDS AZTP01000021.1 6821 5754 -2 - 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229929.peg.805 CDS AZTP01000021.1 7904 6891 -2 - 1014 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229929.peg.806 CDS AZTP01000021.1 7903 8034 1 + 132 hypothetical protein - none -
fig|6666666.229929.peg.807 CDS AZTP01000021.1 8832 8023 -3 - 810 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229929.peg.808 CDS AZTP01000021.1 9782 8901 -2 - 882 Glycosyltransferase - none -
fig|6666666.229929.peg.809 CDS AZTP01000021.1 10975 9782 -1 - 1194 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229929.peg.810 CDS AZTP01000021.1 11760 10984 -3 - 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229929.peg.811 CDS AZTP01000021.1 11891 13414 2 + 1524 putative flippase - none -
fig|6666666.229929.peg.812 CDS AZTP01000021.1 13411 14367 1 + 957 Polysaccharide polymerization protein - none -
fig|6666666.229929.peg.813 CDS AZTP01000021.1 14476 14727 1 + 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.814 CDS AZTP01000021.1 14724 14978 3 + 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.815 CDS AZTP01000021.1 14991 15734 3 + 744 Probable transmembrane protein - none -
fig|6666666.229929.peg.816 CDS AZTP01000021.1 15707 15868 2 + 162 hypothetical protein - none -
fig|6666666.229929.peg.817 CDS AZTP01000021.1 15911 16738 2 + 828 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229929.peg.818 CDS AZTP01000021.1 19045 16871 -1 - 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229929.peg.819 CDS AZTP01000021.1 20568 19219 -3 - 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229929.peg.820 CDS AZTP01000021.1 20786 21304 2 + 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229929.peg.821 CDS AZTP01000021.1 21423 21301 -3 - 123 hypothetical protein - none -
fig|6666666.229929.peg.822 CDS AZTP01000021.1 22372 21374 -1 - 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229929.peg.823 CDS AZTP01000021.1 23245 22421 -1 - 825 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229929.peg.824 CDS AZTP01000021.1 23466 26576 3 + 3111 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229929.peg.825 CDS AZTP01000021.1 26578 27510 1 + 933 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229929.peg.826 CDS AZTP01000021.1 27503 28216 2 + 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229929.peg.827 CDS AZTP01000021.1 28544 28413 -2 - 132 hypothetical protein - none -
fig|6666666.229929.peg.828 CDS AZTP01000021.1 31124 28839 -2 - 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229929.peg.829 CDS AZTP01000021.1 31474 32019 1 + 546 Hydrogenase-4 component A - none -
fig|6666666.229929.peg.830 CDS AZTP01000021.1 32053 34074 1 + 2022 Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 Formate hydrogenase
fig|6666666.229929.peg.831 CDS AZTP01000021.1 34082 35047 2 + 966 Hydrogenase-4 component C - none -
fig|6666666.229929.peg.832 CDS AZTP01000021.1 35060 36505 2 + 1446 Hydrogenase-4 component D - none -
fig|6666666.229929.peg.833 CDS AZTP01000021.1 36516 37154 3 + 639 Hydrogenase-4 component E - none -
fig|6666666.229929.peg.834 CDS AZTP01000021.1 37159 38697 1 + 1539 Hydrogenase-4 component F - none -
fig|6666666.229929.peg.835 CDS AZTP01000021.1 38718 40448 3 + 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229929.peg.836 CDS AZTP01000021.1 40462 41109 1 + 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229929.peg.837 CDS AZTP01000021.1 41106 41882 3 + 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229929.peg.838 CDS AZTP01000021.1 42367 42714 1 + 348 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229929.peg.839 CDS AZTP01000021.1 42743 43165 2 + 423 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) Hydrogenases
fig|6666666.229929.peg.840 CDS AZTP01000021.1 43353 44486 3 + 1134 cell filamentation protein Fic-related protein - none -
fig|6666666.229929.peg.841 CDS AZTP01000021.1 44618 46840 2 + 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229929.peg.844 CDS AZTP01000021.1 47882 47010 -2 - 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) TCA Cycle
fig|6666666.229929.peg.845 CDS AZTP01000021.1 49062 47893 -3 - 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) TCA Cycle
fig|6666666.229929.peg.846 CDS AZTP01000021.1 49279 49049 -1 - 231 hypothetical protein - none -
fig|6666666.229929.peg.847 CDS AZTP01000021.1 50492 49269 -2 - 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229929.peg.848 CDS AZTP01000021.1 53427 50620 -3 - 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229929.peg.849 CDS AZTP01000021.1 53419 53613 1 + 195 hypothetical protein - none -
fig|6666666.229929.peg.850 CDS AZTP01000021.1 54285 53647 -3 - 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229929.peg.851 CDS AZTP01000021.1 54407 54282 -2 - 126 hypothetical protein - none -
fig|6666666.229929.peg.852 CDS AZTP01000021.1 54921 54361 -3 - 561 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229929.peg.853 CDS AZTP01000021.1 56498 54975 -2 - 1524 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229929.peg.854 CDS AZTP01000021.1 58634 56577 -2 - 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229929.peg.855 CDS AZTP01000021.1 59316 58708 -3 - 609 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229929.peg.856 CDS AZTP01000021.1 59541 60824 3 + 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229929.peg.857 CDS AZTP01000021.1 60787 63444 1 + 2658 Paraquat-inducible protein B Oxidative stress
fig|6666666.229929.peg.858 CDS AZTP01000021.1 64764 63520 -3 - 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229929.peg.859 CDS AZTP01000021.1 65028 66146 3 + 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229929.peg.860 CDS AZTP01000021.1 66130 66990 1 + 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229929.peg.861 CDS AZTP01000021.1 66990 67763 3 + 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229929.peg.862 CDS AZTP01000021.1 67894 68991 1 + 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229929.peg.863 CDS AZTP01000021.1 69115 70011 1 + 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229929.peg.864 CDS AZTP01000021.1 71406 70090 -3 - 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229929.peg.865 CDS AZTP01000021.1 71716 73383 1 + 1668 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229929.peg.866 CDS AZTP01000021.1 73598 73476 -2 - 123 hypothetical protein - none -
fig|6666666.229929.peg.867 CDS AZTP01000021.1 75105 73765 -3 - 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229929.peg.868 CDS AZTP01000021.1 75735 75118 -3 - 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229929.peg.869 CDS AZTP01000021.1 78581 75834 -2 - 2748 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229929.peg.870 CDS AZTP01000021.1 79064 78585 -2 - 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229929.peg.871 CDS AZTP01000021.1 81276 79903 -3 - 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229929.peg.872 CDS AZTP01000021.1 82434 81280 -3 - 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229929.peg.873 CDS AZTP01000021.1 82599 83279 3 + 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229929.peg.874 CDS AZTP01000021.1 83305 84570 1 + 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229929.peg.875 CDS AZTP01000021.1 84639 85250 3 + 612 SH3 domain protein - none -
fig|6666666.229929.peg.876 CDS AZTP01000021.1 85250 86527 2 + 1278 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229929.peg.877 CDS AZTP01000021.1 86588 87214 2 + 627 Outer membrane lipoprotein LolB precursor - none -
fig|6666666.229929.peg.878 CDS AZTP01000021.1 87211 88122 1 + 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229929.peg.879 CDS AZTP01000021.1 88163 89113 2 + 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229929.peg.880 CDS AZTP01000021.1 89290 89436 1 + 147 hypothetical protein - none -
fig|6666666.229929.peg.881 CDS AZTP01000021.1 89735 90880 2 + 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229929.peg.882 CDS AZTP01000021.1 91119 92708 3 + 1590 L-lactate permease Lactate utilization
fig|6666666.229929.peg.883 CDS AZTP01000021.1 93195 92863 -3 - 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229929.peg.884 CDS AZTP01000021.1 93395 94582 2 + 1188 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229929.peg.885 CDS AZTP01000021.1 94694 95671 2 + 978 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229929.peg.886 CDS AZTP01000021.1 95664 95792 3 + 129 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Histidine Biosynthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229929.peg.887 CDS AZTP01000021.1 95803 97134 1 + 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229929.peg.888 CDS AZTP01000021.1 97245 97096 -3 - 150 hypothetical protein - none -
fig|6666666.229929.peg.889 CDS AZTP01000022.1 2154 910 -3 - 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.890 CDS AZTP01000022.1 2915 2187 -2 - 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.891 CDS AZTP01000022.1 3408 2965 -3 - 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.892 CDS AZTP01000022.1 4624 3401 -1 - 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.893 CDS AZTP01000022.1 5196 4633 -3 - 564 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.894 CDS AZTP01000022.1 7515 5242 -3 - 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.895 CDS AZTP01000022.1 8106 7522 -3 - 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.896 CDS AZTP01000022.1 8549 8103 -2 - 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.897 CDS AZTP01000022.1 9472 8546 -1 - 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.898 CDS AZTP01000022.1 10191 9469 -3 - 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.899 CDS AZTP01000022.1 11552 10191 -2 - 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.900 CDS AZTP01000022.1 12094 11549 -1 - 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.901 CDS AZTP01000022.1 13787 12120 -2 - 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.902 CDS AZTP01000022.1 14038 13787 -1 - 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.903 CDS AZTP01000022.1 14304 14041 -3 - 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.904 CDS AZTP01000022.1 15064 14282 -1 - 783 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.905 CDS AZTP01000022.1 15792 15049 -3 - 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229929.peg.906 CDS AZTP01000022.1 15930 15799 -3 - 132 hypothetical protein - none -
fig|6666666.229929.peg.907 CDS AZTP01000022.1 16093 16518 1 + 426 Excinuclease ATPase subunit - none -
fig|6666666.229929.peg.908 CDS AZTP01000022.1 17329 16616 -1 - 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229929.peg.909 CDS AZTP01000022.1 18234 17344 -3 - 891 Tyrosine recombinase XerC - none -
fig|6666666.229929.peg.910 CDS AZTP01000022.1 19068 18244 -3 - 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229929.peg.911 CDS AZTP01000022.1 19330 19142 -1 - 189 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein
fig|6666666.229929.peg.912 CDS AZTP01000022.1 20358 19330 -3 - 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229929.peg.913 CDS AZTP01000022.1 20541 21041 3 + 501 hypothetical protein - none -
fig|6666666.229929.peg.914 CDS AZTP01000022.1 23716 21146 -1 - 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229929.peg.915 CDS AZTP01000022.1 23879 24595 2 + 717 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229929.peg.916 CDS AZTP01000022.1 25784 24672 -2 - 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229929.peg.917 CDS AZTP01000022.1 26781 25969 -3 - 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229929.peg.918 CDS AZTP01000022.1 26807 27610 2 + 804 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
CBSS-216591.1.peg.168
fig|6666666.229929.peg.919 CDS AZTP01000022.1 27721 28305 1 + 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229929.peg.920 CDS AZTP01000022.1 28817 28656 -2 - 162 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Histidine Biosynthesis;
Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.229929.peg.921 CDS AZTP01000022.1 29414 29277 -2 - 138 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) Histidine Biosynthesis
fig|6666666.229929.peg.922 CDS AZTP01000022.1 29941 29396 -1 - 546 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.229929.peg.923 CDS AZTP01000022.1 30096 29932 -3 - 165 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Histidine Biosynthesis
fig|6666666.229929.peg.924 CDS AZTP01000022.1 30816 30223 -3 - 594 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) Histidine Biosynthesis
fig|6666666.229929.peg.925 CDS AZTP01000022.1 31685 30813 -2 - 873 hypothetical protein - none -
fig|6666666.229929.peg.926 CDS AZTP01000022.1 31989 31789 -3 - 201 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis;
Histidine Biosynthesis
fig|6666666.229929.peg.927 CDS AZTP01000022.1 32217 32023 -3 - 195 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis;
Histidine Biosynthesis
fig|6666666.229929.peg.928 CDS AZTP01000022.1 32584 32351 -1 - 234 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) Histidine Biosynthesis;
Histidine Biosynthesis
fig|6666666.229929.peg.929 CDS AZTP01000022.1 32858 32721 -2 - 138 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.229929.peg.930 CDS AZTP01000022.1 33321 32836 -3 - 486 ATP phosphoribosyltransferase (EC 2.4.2.17) Histidine Biosynthesis;
Riboflavin synthesis cluster
fig|6666666.229929.peg.931 CDS AZTP01000023.1 25 660 1 + 636 Cell division protein - none -
fig|6666666.229929.peg.932 CDS AZTP01000023.1 863 1429 2 + 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229929.peg.933 CDS AZTP01000023.1 1455 2651 3 + 1197 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229929.peg.934 CDS AZTP01000023.1 2665 5763 1 + 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229929.peg.935 CDS AZTP01000023.1 5831 6709 2 + 879 Orf2 - none -
fig|6666666.229929.peg.936 CDS AZTP01000023.1 7431 8378 3 + 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229929.peg.937 CDS AZTP01000023.1 8394 8954 3 + 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229929.peg.938 CDS AZTP01000023.1 8978 9271 2 + 294 COG1872 - none -
fig|6666666.229929.peg.939 CDS AZTP01000023.1 9389 10048 2 + 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229929.peg.940 CDS AZTP01000023.1 10076 12139 2 + 2064 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229929.peg.941 CDS AZTP01000023.1 13008 12271 -3 - 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229929.peg.942 CDS AZTP01000023.1 13984 13010 -1 - 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229929.peg.943 CDS AZTP01000023.1 14091 14879 3 + 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229929.peg.944 CDS AZTP01000023.1 15490 14915 -1 - 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.229929.peg.945 CDS AZTP01000023.1 16110 15784 -3 - 327 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229929.peg.946 CDS AZTP01000023.1 16269 16829 3 + 561 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229929.peg.947 CDS AZTP01000023.1 16843 18144 1 + 1302 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229929.peg.948 CDS AZTP01000023.1 18633 18881 3 + 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229929.peg.949 CDS AZTP01000023.1 18907 19434 1 + 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229929.peg.950 CDS AZTP01000023.1 19491 20240 3 + 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229929.peg.951 CDS AZTP01000023.1 20266 20616 1 + 351 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.229929.peg.952 CDS AZTP01000023.1 21214 20726 -1 - 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229929.peg.953 CDS AZTP01000023.1 22287 21214 -3 - 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229929.peg.954 CDS AZTP01000023.1 23412 22357 -3 - 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229929.peg.955 CDS AZTP01000023.1 23662 26064 1 + 2403 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229929.peg.956 CDS AZTP01000023.1 26061 26798 3 + 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229929.peg.957 CDS AZTP01000023.1 26842 27111 1 + 270 hypothetical protein - none -
fig|6666666.229929.peg.958 CDS AZTP01000023.1 27132 28574 3 + 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229929.peg.959 CDS AZTP01000023.1 28711 28580 -1 - 132 hypothetical protein - none -
fig|6666666.229929.peg.960 CDS AZTP01000023.1 28724 29806 2 + 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229929.peg.961 CDS AZTP01000023.1 30306 29863 -3 - 444 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
YrdC-YciO-Sua5 protein family
fig|6666666.229929.peg.962 CDS AZTP01000023.1 30983 30312 -2 - 672 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
YrdC-YciO-Sua5 protein family
fig|6666666.229929.peg.963 CDS AZTP01000023.1 31658 31209 -2 - 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome LSU bacterial
fig|6666666.229929.peg.964 CDS AZTP01000023.1 31904 31674 -2 - 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229929.peg.965 CDS AZTP01000023.1 32243 31917 -2 - 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229929.peg.966 CDS AZTP01000023.1 32607 32230 -3 - 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229929.peg.967 CDS AZTP01000023.1 32769 32650 -3 - 120 hypothetical protein - none -
fig|6666666.229929.peg.968 CDS AZTP01000023.1 33383 32760 -2 - 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229929.peg.969 CDS AZTP01000023.1 33577 36015 1 + 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.970 CDS AZTP01000023.1 37900 36056 -1 - 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229929.peg.971 CDS AZTP01000023.1 38906 37989 -2 - 918 transcriptional regulator MtrA - none -
fig|6666666.229929.peg.972 CDS AZTP01000023.1 39010 39351 1 + 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229929.peg.973 CDS AZTP01000023.1 40494 39451 -3 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229929.peg.974 CDS AZTP01000023.1 40584 41309 3 + 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229929.peg.975 CDS AZTP01000023.1 41838 41353 -3 - 486 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229929.peg.976 CDS AZTP01000023.1 43122 41839 -3 - 1284 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) KDO2-Lipid A biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229929.peg.977 CDS AZTP01000023.1 43221 43982 3 + 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229929.peg.978 CDS AZTP01000023.1 45217 44048 -1 - 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229929.peg.979 CDS AZTP01000023.1 45425 45234 -2 - 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229929.peg.980 CDS AZTP01000023.1 46015 45440 -1 - 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229929.peg.981 CDS AZTP01000023.1 46783 46043 -1 - 741 5-nucleotidase SurE (EC 3.1.3.5) Housecleaning nucleoside triphosphate pyrophosphatases;
Stationary phase repair cluster
fig|6666666.229929.peg.982 CDS AZTP01000023.1 47826 46816 -3 - 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229929.peg.983 CDS AZTP01000023.1 48302 47823 -2 - 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229929.peg.984 CDS AZTP01000023.1 48994 48299 -1 - 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229929.peg.985 CDS AZTP01000023.1 49272 48994 -3 - 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229929.peg.986 CDS AZTP01000023.1 49424 50098 2 + 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229929.peg.987 CDS AZTP01000023.1 50102 50776 2 + 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229929.peg.988 CDS AZTP01000023.1 51053 51703 2 + 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229929.peg.989 CDS AZTP01000023.1 51712 52644 1 + 933 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229929.peg.990 CDS AZTP01000023.1 53333 52680 -2 - 654 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229929.peg.991 CDS AZTP01000023.1 54101 53361 -2 - 741 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229929.peg.992 CDS AZTP01000024.1 188 478 2 + 291 hypothetical protein - none -
fig|6666666.229929.peg.993 CDS AZTP01000024.1 708 475 -3 - 234 hypothetical protein - none -
fig|6666666.229929.peg.994 CDS AZTP01000024.1 1146 2270 3 + 1125 FIG00698503: hypothetical protein - none -
fig|6666666.229929.peg.995 CDS AZTP01000024.1 2294 2623 2 + 330 putative single stranded DNA-binding protien - none -
fig|6666666.229929.peg.996 CDS AZTP01000024.1 3101 3322 2 + 222 hypothetical protein - none -
fig|6666666.229929.peg.997 CDS AZTP01000024.1 3443 4594 2 + 1152 hypothetical protein - none -
fig|6666666.229929.peg.998 CDS AZTP01000024.1 4602 4907 3 + 306 putative phage-related membrane protein - none -
fig|6666666.229929.peg.999 CDS AZTP01000024.1 4915 6045 1 + 1131 putative phage-related secreted protein - none -
fig|6666666.229929.peg.1000 CDS AZTP01000024.1 6023 7177 2 + 1155 FIG00698722: hypothetical protein - none -
fig|6666666.229929.peg.1001 CDS AZTP01000025.1 705 85 -3 - 621 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229929.peg.1002 CDS AZTP01000025.1 861 1679 3 + 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229929.peg.1003 CDS AZTP01000025.1 1682 2062 2 + 381 CrcB protein - none -
fig|6666666.229929.peg.1004 CDS AZTP01000025.1 2963 2040 -2 - 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229929.peg.1005 CDS AZTP01000025.1 4101 2956 -3 - 1146 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229929.peg.1006 CDS AZTP01000025.1 4135 4296 1 + 162 hypothetical protein - none -
fig|6666666.229929.peg.1007 CDS AZTP01000025.1 5388 4309 -3 - 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229929.peg.1008 CDS AZTP01000025.1 6617 5454 -2 - 1164 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229929.peg.1009 CDS AZTP01000025.1 7429 6734 -1 - 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229929.peg.1010 CDS AZTP01000025.1 7536 7757 3 + 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229929.peg.1011 CDS AZTP01000025.1 8899 7820 -1 - 1080 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229929.peg.1012 CDS AZTP01000025.1 9085 10452 1 + 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.1013 CDS AZTP01000025.1 14821 10553 -1 - 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229929.peg.1014 CDS AZTP01000025.1 18952 14924 -1 - 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229929.peg.1015 CDS AZTP01000025.1 19594 19223 -1 - 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229929.peg.1016 CDS AZTP01000025.1 20137 19646 -1 - 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229929.peg.1017 CDS AZTP01000025.1 21182 20493 -2 - 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229929.peg.1018 CDS AZTP01000025.1 21615 21187 -3 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229929.peg.1019 CDS AZTP01000025.1 22323 21772 -3 - 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229929.peg.1020 CDS AZTP01000025.1 22735 22325 -1 - 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229929.peg.1021 CDS AZTP01000025.1 23892 23188 -3 - 705 hypothetical protein - none -
fig|6666666.229929.peg.1022 CDS AZTP01000025.1 24070 23930 -1 - 141 hypothetical protein - none -
fig|6666666.229929.peg.1023 CDS AZTP01000025.1 24369 24067 -3 - 303 hypothetical protein - none -
fig|6666666.229929.peg.1024 CDS AZTP01000025.1 25187 24630 -2 - 558 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229929.peg.1025 CDS AZTP01000025.1 25297 26214 1 + 918 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229929.peg.1026 CDS AZTP01000025.1 26654 26376 -2 - 279 hypothetical protein - none -
fig|6666666.229929.peg.1027 CDS AZTP01000025.1 28340 26676 -2 - 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229929.peg.1028 CDS AZTP01000025.1 29286 28345 -3 - 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229929.peg.1029 CDS AZTP01000025.1 30818 29289 -2 - 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229929.peg.1030 CDS AZTP01000025.1 31468 30929 -1 - 540 ATPases involved in chromosome partitioning - none -
fig|6666666.229929.peg.1031 CDS AZTP01000025.1 32151 31567 -3 - 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229929.peg.1032 CDS AZTP01000025.1 32235 32501 3 + 267 Protein yihD - none -
fig|6666666.229929.peg.1033 CDS AZTP01000025.1 32520 33137 3 + 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229929.peg.1034 CDS AZTP01000025.1 33197 33526 2 + 330 Protein yifE - none -
fig|6666666.229929.peg.1035 CDS AZTP01000025.1 33596 34693 2 + 1098 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) - none -
fig|6666666.229929.peg.1036 CDS AZTP01000025.1 34695 35453 3 + 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229929.peg.1037 CDS AZTP01000025.1 35545 36972 1 + 1428 hypothetical protein - none -
fig|6666666.229929.peg.1038 CDS AZTP01000025.1 37201 39801 1 + 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229929.peg.1039 CDS AZTP01000025.1 40824 40006 -3 - 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229929.peg.1040 CDS AZTP01000025.1 42677 41022 -2 - 1656 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229929.peg.1041 CDS AZTP01000025.1 42766 42894 1 + 129 hypothetical protein - none -
fig|6666666.229929.peg.1042 CDS AZTP01000025.1 43558 42866 -1 - 693 Metal-dependent hydrolase - none -
fig|6666666.229929.peg.1043 CDS AZTP01000025.1 44916 43576 -3 - 1341 FIG00782214: hypothetical protein - none -
fig|6666666.229929.peg.1044 CDS AZTP01000025.1 46293 44941 -3 - 1353 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229929.peg.1045 CDS AZTP01000025.1 47158 46382 -1 - 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229929.peg.1046 CDS AZTP01000025.1 47793 47161 -3 - 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229929.peg.1047 CDS AZTP01000025.1 49034 47790 -2 - 1245 FIG00641944: hypothetical protein - none -
fig|6666666.229929.peg.1048 CDS AZTP01000025.1 49858 49037 -1 - 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) - none -
fig|6666666.229929.peg.1049 CDS AZTP01000025.1 50134 50892 1 + 759 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229929.peg.1050 CDS AZTP01000025.1 50969 51307 2 + 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229929.peg.1051 CDS AZTP01000025.1 51446 52489 2 + 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229929.peg.1052 CDS AZTP01000025.1 52491 53123 3 + 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229929.peg.1053 CDS AZTP01000025.1 53120 54103 2 + 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229929.peg.1054 CDS AZTP01000025.1 54107 54889 2 + 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229929.peg.1055 CDS AZTP01000025.1 54921 55445 3 + 525 FIG00696143: hypothetical protein - none -
fig|6666666.229929.peg.1056 CDS AZTP01000025.1 55678 55442 -1 - 237 hypothetical protein - none -
fig|6666666.229929.peg.1057 CDS AZTP01000026.1 22 627 1 + 606 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229929.peg.1058 CDS AZTP01000026.1 674 787 2 + 114 hypothetical protein - none -
fig|6666666.229929.peg.1059 CDS AZTP01000026.1 1233 748 -3 - 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229929.peg.1060 CDS AZTP01000026.1 1737 1273 -3 - 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229929.peg.1061 CDS AZTP01000026.1 2524 1739 -1 - 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229929.peg.1062 CDS AZTP01000026.1 2676 3782 3 + 1107 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229929.peg.1063 CDS AZTP01000026.1 4477 3845 -1 - 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229929.peg.1064 CDS AZTP01000026.1 5372 4503 -2 - 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.1065 CDS AZTP01000026.1 5616 6269 3 + 654 Putative lipase in cluster with Phosphatidate cytidylyltransferase CBSS-316407.3.peg.1371;
Triacylglycerol metabolism
fig|6666666.229929.peg.1066 CDS AZTP01000026.1 6273 7355 3 + 1083 Putative lipase in cluster with Phosphatidate cytidylyltransferase CBSS-316407.3.peg.1371;
Triacylglycerol metabolism
fig|6666666.229929.peg.1067 CDS AZTP01000026.1 7357 8673 1 + 1317 Ser/Thr and Tyr protein phosphatase (dual specificity) CBSS-316407.3.peg.1371
fig|6666666.229929.peg.1068 CDS AZTP01000026.1 8760 9125 3 + 366 hypothetical protein - none -
fig|6666666.229929.peg.1069 CDS AZTP01000026.1 9409 9278 -1 - 132 hypothetical protein - none -
fig|6666666.229929.peg.1070 CDS AZTP01000026.1 9458 10072 2 + 615 Biotin synthesis protein BioC Biotin biosynthesis Experimental
fig|6666666.229929.peg.1071 CDS AZTP01000026.1 10172 10696 2 + 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229929.peg.1072 CDS AZTP01000026.1 10713 10883 3 + 171 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.229929.peg.1073 CDS AZTP01000026.1 10910 11929 2 + 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.1074 CDS AZTP01000026.1 11976 12926 3 + 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229929.peg.1075 CDS AZTP01000026.1 13031 13969 2 + 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229929.peg.1076 CDS AZTP01000026.1 13994 14722 2 + 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229929.peg.1077 CDS AZTP01000026.1 14996 15226 2 + 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.1078 CDS AZTP01000026.1 15378 15262 -3 - 117 hypothetical protein - none -
fig|6666666.229929.peg.1079 CDS AZTP01000026.1 15759 16685 3 + 927 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229929.peg.1080 CDS AZTP01000026.1 18046 16808 -1 - 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229929.peg.1081 CDS AZTP01000026.1 18370 19626 1 + 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229929.peg.1082 CDS AZTP01000026.1 19693 20001 1 + 309 Iojap protein - none -
fig|6666666.229929.peg.1083 CDS AZTP01000026.1 19992 20528 3 + 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229929.peg.1084 CDS AZTP01000026.1 20541 22502 3 + 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229929.peg.1085 CDS AZTP01000026.1 22489 23610 1 + 1122 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229929.peg.1086 CDS AZTP01000026.1 23659 24516 1 + 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229929.peg.1087 CDS AZTP01000026.1 24547 25737 1 + 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229929.peg.1088 CDS AZTP01000026.1 25811 26110 2 + 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229929.peg.1089 CDS AZTP01000026.1 26156 26794 2 + 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229929.peg.1090 CDS AZTP01000026.1 26858 27820 2 + 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229929.peg.1091 CDS AZTP01000026.1 29378 27969 -2 - 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229929.peg.1092 CDS AZTP01000026.1 29448 29960 3 + 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229929.peg.1093 CDS AZTP01000026.1 30051 30206 3 + 156 hypothetical protein - none -
fig|6666666.229929.peg.1094 CDS AZTP01000026.1 30199 30501 1 + 303 Phage protein - none -
fig|6666666.229929.peg.1095 CDS AZTP01000026.1 30488 31276 2 + 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229929.peg.1096 CDS AZTP01000026.1 31770 31303 -3 - 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229929.peg.1097 CDS AZTP01000026.1 31804 31929 1 + 126 hypothetical protein - none -
fig|6666666.229929.peg.1098 CDS AZTP01000026.1 32264 32139 -2 - 126 hypothetical protein - none -
fig|6666666.229929.peg.1099 CDS AZTP01000026.1 34646 32520 -2 - 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229929.peg.1100 CDS AZTP01000027.1 1158 25 -3 - 1134 Autotransporter adhesin - none -
fig|6666666.229929.peg.1101 CDS AZTP01000027.1 5482 1223 -1 - 4260 Autotransporter adhesin - none -
fig|6666666.229929.peg.1102 CDS AZTP01000027.1 6248 6132 -2 - 117 hypothetical protein - none -
fig|6666666.229929.peg.1103 CDS AZTP01000027.1 8052 6265 -3 - 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) - none -
fig|6666666.229929.peg.1104 CDS AZTP01000027.1 8250 11726 3 + 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229929.peg.1105 CDS AZTP01000027.1 11821 12300 1 + 480 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229929.peg.1106 CDS AZTP01000027.1 12527 12646 2 + 120 Mobile element protein - none -
fig|6666666.229929.peg.1107 CDS AZTP01000027.1 13248 13105 -3 - 144 hypothetical protein - none -
fig|6666666.229929.peg.1108 CDS AZTP01000027.1 14695 13241 -1 - 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229929.peg.1109 CDS AZTP01000027.1 16308 14959 -3 - 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229929.peg.1110 CDS AZTP01000027.1 17988 16615 -3 - 1374 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229929.peg.1111 CDS AZTP01000027.1 18889 18101 -1 - 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229929.peg.1112 CDS AZTP01000027.1 19576 21021 1 + 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229929.peg.1113 CDS AZTP01000027.1 22245 21199 -3 - 1047 Phage integrase - none -
fig|6666666.229929.peg.1114 CDS AZTP01000027.1 23612 23460 -2 - 153 hypothetical protein - none -
fig|6666666.229929.peg.1115 CDS AZTP01000027.1 25144 24110 -1 - 1035 hypothetical protein - none -
fig|6666666.229929.peg.1116 CDS AZTP01000027.1 25894 25196 -1 - 699 Transcriptional regulator - none -
fig|6666666.229929.peg.1117 CDS AZTP01000027.1 26006 26194 2 + 189 putative Cro protein - none -
fig|6666666.229929.peg.1118 CDS AZTP01000027.1 26243 26686 2 + 444 Orf33 - none -
fig|6666666.229929.peg.1119 CDS AZTP01000027.1 26736 27464 3 + 729 Putative DNA-binding protein Roi of bacteriophage BP-933W - none -
fig|6666666.229929.peg.1120 CDS AZTP01000027.1 27666 28463 3 + 798 Primosomal protein I - none -
fig|6666666.229929.peg.1121 CDS AZTP01000027.1 28777 29226 1 + 450 FIG00643583: hypothetical protein - none -
fig|6666666.229929.peg.1122 CDS AZTP01000027.1 29585 29301 -2 - 285 Phage protein - none -
fig|6666666.229929.peg.1123 CDS AZTP01000027.1 29802 29575 -3 - 228 hypothetical protein; Some similarities with a protein of bacteriophage - none -
fig|6666666.229929.peg.1124 CDS AZTP01000027.1 29912 30556 2 + 645 Phage baseplate Phage baseplate proteins
fig|6666666.229929.peg.1125 CDS AZTP01000027.1 30553 30912 1 + 360 phage-related protein - none -
fig|6666666.229929.peg.1126 CDS AZTP01000027.1 31357 30938 -1 - 420 hypothetical protein - none -
fig|6666666.229929.peg.1127 CDS AZTP01000027.1 31591 31409 -1 - 183 hypothetical protein - none -
fig|6666666.229929.peg.1128 CDS AZTP01000027.1 31845 32993 3 + 1149 Family of unknown function (DUF450) family - none -
fig|6666666.229929.peg.1129 CDS AZTP01000027.1 33443 34087 2 + 645 FIG00696993: hypothetical protein - none -
fig|6666666.229929.peg.1130 CDS AZTP01000027.1 34586 34795 2 + 210 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.229929.peg.1131 CDS AZTP01000027.1 35829 34897 -3 - 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229929.peg.1132 CDS AZTP01000027.1 35978 35781 -2 - 198 hypothetical protein - none -
fig|6666666.229929.peg.1133 CDS AZTP01000027.1 36258 36022 -3 - 237 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229929.peg.1134 CDS AZTP01000027.1 36447 36334 -3 - 114 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229929.peg.1135 CDS AZTP01000027.1 36509 36634 2 + 126 hypothetical protein - none -
fig|6666666.229929.peg.1136 CDS AZTP01000027.1 36665 37264 2 + 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229929.peg.1137 CDS AZTP01000027.1 37267 38064 1 + 798 Protein of unknown function DUF81 - none -
fig|6666666.229929.peg.1138 CDS AZTP01000027.1 38073 38870 3 + 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229929.peg.1139 CDS AZTP01000027.1 38867 39718 2 + 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229929.peg.1140 CDS AZTP01000027.1 40080 40571 3 + 492 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229929.peg.1141 CDS AZTP01000027.1 40672 41232 1 + 561 Protein of unknown function DUF414 - none -
fig|6666666.229929.peg.1142 CDS AZTP01000027.1 41245 41679 1 + 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229929.peg.1143 CDS AZTP01000027.1 41699 43066 2 + 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229929.peg.1144 CDS AZTP01000027.1 43585 43142 -1 - 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229929.peg.1145 CDS AZTP01000027.1 43759 44550 1 + 792 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229929.peg.1146 CDS AZTP01000027.1 44663 45520 2 + 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229929.peg.1147 CDS AZTP01000027.1 45560 45979 2 + 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229929.peg.1148 CDS AZTP01000027.1 45961 46290 1 + 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229929.peg.1149 CDS AZTP01000027.1 46271 47272 2 + 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229929.peg.1150 CDS AZTP01000027.1 47364 47840 3 + 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229929.peg.1151 CDS AZTP01000027.1 47947 47795 -1 - 153 hypothetical protein - none -
fig|6666666.229929.peg.1152 CDS AZTP01000027.1 47964 48431 3 + 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229929.peg.1153 CDS AZTP01000027.1 48474 49820 3 + 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229929.peg.1154 CDS AZTP01000027.1 50116 50880 1 + 765 Periplasmic protein TonB, links inner and outer membranes - none -
fig|6666666.229929.peg.1155 CDS AZTP01000027.1 50999 52387 2 + 1389 FOG: TPR repeat - none -
fig|6666666.229929.peg.1156 CDS AZTP01000027.1 52411 52683 1 + 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229929.peg.1157 CDS AZTP01000027.1 52680 54116 3 + 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229929.peg.1158 CDS AZTP01000027.1 54126 54677 3 + 552 Protein involved in cell division - none -
fig|6666666.229929.peg.1159 CDS AZTP01000027.1 54690 55574 3 + 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229929.peg.1160 CDS AZTP01000027.1 55819 56859 1 + 1041 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229929.peg.1161 CDS AZTP01000027.1 56864 57163 2 + 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229929.peg.1162 CDS AZTP01000027.1 57543 57295 -3 - 249 Uncharacterized protein HI0966 - none -
fig|6666666.229929.peg.1163 CDS AZTP01000027.1 58321 57998 -1 - 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229929.peg.1164 CDS AZTP01000027.1 59923 58550 -1 - 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229929.peg.1165 CDS AZTP01000027.1 60591 60319 -3 - 273 FIG00904058: hypothetical protein - none -
fig|6666666.229929.peg.1166 CDS AZTP01000027.1 60803 60591 -2 - 213 FIG003276: zinc-binding protein - none -
fig|6666666.229929.peg.1167 CDS AZTP01000027.1 61416 60793 -3 - 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229929.peg.1168 CDS AZTP01000027.1 62155 61466 -1 - 690 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229929.peg.1169 CDS AZTP01000027.1 63375 62152 -3 - 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229929.peg.1170 CDS AZTP01000027.1 64777 63368 -1 - 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229929.peg.1171 CDS AZTP01000027.1 65256 64804 -3 - 453 Type IV pilin PilA Type IV pilus
fig|6666666.229929.peg.1172 CDS AZTP01000027.1 65306 65932 2 + 627 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229929.peg.1173 CDS AZTP01000027.1 66877 66407 -1 - 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229929.peg.1174 CDS AZTP01000027.1 67069 69306 1 + 2238 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229929.peg.1175 CDS AZTP01000027.1 69385 70287 1 + 903 Lipoprotein nlpI precursor - none -
fig|6666666.229929.peg.1176 CDS AZTP01000027.1 70423 72201 1 + 1779 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229929.peg.1177 CDS AZTP01000027.1 72819 72280 -3 - 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229929.peg.1178 CDS AZTP01000027.1 74419 73058 -1 - 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229929.peg.1179 CDS AZTP01000027.1 74491 75069 1 + 579 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229929.peg.1180 CDS AZTP01000027.1 75757 75257 -1 - 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229929.peg.1181 CDS AZTP01000027.1 76713 75808 -3 - 906 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229929.peg.1182 CDS AZTP01000027.1 76883 77599 2 + 717 COG1720: Uncharacterized conserved protein tRNA modification Bacteria
fig|6666666.229929.peg.1183 CDS AZTP01000027.1 77671 77913 1 + 243 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.1184 CDS AZTP01000027.1 77903 78067 2 + 165 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.1185 CDS AZTP01000027.1 81118 78032 -1 - 3087 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.1186 CDS AZTP01000028.1 477 298 -3 - 180 hypothetical protein - none -
fig|6666666.229929.peg.1187 CDS AZTP01000028.1 1823 936 -2 - 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229929.peg.1188 CDS AZTP01000028.1 3076 1823 -1 - 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229929.peg.1189 CDS AZTP01000028.1 3891 3172 -3 - 720 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229929.peg.1190 CDS AZTP01000028.1 4773 3949 -3 - 825 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229929.peg.1191 CDS AZTP01000029.1 878 495 -2 - 384 hypothetical protein - none -
fig|6666666.229929.peg.1192 CDS AZTP01000029.1 1850 906 -2 - 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229929.peg.1193 CDS AZTP01000029.1 4309 1862 -1 - 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229929.peg.1194 CDS AZTP01000029.1 4529 4398 -2 - 132 hypothetical protein - none -
fig|6666666.229929.peg.1195 CDS AZTP01000029.1 4663 6051 1 + 1389 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229929.peg.1196 CDS AZTP01000029.1 6044 6739 2 + 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229929.peg.1197 CDS AZTP01000029.1 7624 6788 -1 - 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229929.peg.1198 CDS AZTP01000029.1 9448 7937 -1 - 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229929.peg.1199 CDS AZTP01000029.1 10587 9583 -3 - 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229929.peg.1200 CDS AZTP01000029.1 11593 10700 -1 - 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229929.peg.1201 CDS AZTP01000029.1 11751 12215 3 + 465 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229929.peg.1202 CDS AZTP01000029.1 13559 12279 -2 - 1281 Immunoglobulin A1 protease / autotransporter domain, T5aSS type secretion Autotransporter proteins;
Autotransporter proteins
fig|6666666.229929.peg.1203 CDS AZTP01000030.1 3081 1228 -3 - 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229929.peg.1204 CDS AZTP01000030.1 3469 4878 1 + 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229929.peg.1205 CDS AZTP01000030.1 5712 4987 -3 - 726 Integral membrane protein TerC - none -
fig|6666666.229929.peg.1206 CDS AZTP01000030.1 6445 5777 -1 - 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229929.peg.1207 CDS AZTP01000030.1 6981 6442 -3 - 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229929.peg.1208 CDS AZTP01000030.1 8490 7057 -3 - 1434 Long-chain fatty acid transport protein - none -
fig|6666666.229929.peg.1209 CDS AZTP01000030.1 8560 8697 1 + 138 hypothetical protein - none -
fig|6666666.229929.peg.1210 CDS AZTP01000030.1 8694 8984 3 + 291 FIG00696346: hypothetical protein - none -
fig|6666666.229929.peg.1211 CDS AZTP01000031.1 8 1039 2 + 1032 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.229929.peg.1212 CDS AZTP01000031.1 1199 1068 -2 - 132 hypothetical protein - none -
fig|6666666.229929.peg.1213 CDS AZTP01000031.1 1661 1200 -2 - 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229929.peg.1214 CDS AZTP01000031.1 2314 1673 -1 - 642 Stringent starvation protein A Carbon Starvation
fig|6666666.229929.peg.1215 CDS AZTP01000031.1 2970 2515 -3 - 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229929.peg.1216 CDS AZTP01000031.1 3216 2971 -3 - 246 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229929.peg.1217 CDS AZTP01000031.1 3656 3216 -2 - 441 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229929.peg.1218 CDS AZTP01000031.1 4764 3751 -3 - 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229929.peg.1219 CDS AZTP01000032.1 83 871 2 + 789 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229929.peg.1220 CDS AZTP01000032.1 1242 2786 3 + 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229929.peg.1221 CDS AZTP01000032.1 3066 2848 -3 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229929.peg.1222 CDS AZTP01000032.1 3218 3084 -2 - 135 hypothetical protein - none -
fig|6666666.229929.peg.1223 CDS AZTP01000032.1 3285 4589 3 + 1305 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229929.peg.1224 CDS AZTP01000032.1 4601 5026 2 + 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229929.peg.1225 CDS AZTP01000032.1 5161 6306 1 + 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229929.peg.1226 CDS AZTP01000032.1 6299 6418 2 + 120 hypothetical protein - none -
fig|6666666.229929.peg.1227 CDS AZTP01000032.1 7508 6396 -2 - 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229929.peg.1228 CDS AZTP01000032.1 7681 9744 1 + 2064 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229929.peg.1229 CDS AZTP01000032.1 10074 9880 -3 - 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229929.peg.1230 CDS AZTP01000032.1 10415 10074 -2 - 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229929.peg.1231 CDS AZTP01000032.1 12286 10427 -1 - 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229929.peg.1232 CDS AZTP01000032.1 12828 12307 -3 - 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229929.peg.1233 CDS AZTP01000032.1 13163 12840 -2 - 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229929.peg.1234 CDS AZTP01000032.1 13689 13306 -3 - 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229929.peg.1235 CDS AZTP01000032.1 14963 13749 -2 - 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229929.peg.1236 CDS AZTP01000032.1 15491 15018 -2 - 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229929.peg.1237 CDS AZTP01000032.1 16293 15553 -3 - 741 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Bacteria
fig|6666666.229929.peg.1238 CDS AZTP01000032.1 16444 17244 1 + 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229929.peg.1239 CDS AZTP01000032.1 19408 17297 -1 - 2112 unknown - none -
fig|6666666.229929.peg.1240 CDS AZTP01000032.1 20832 19786 -3 - 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229929.peg.1241 CDS AZTP01000032.1 22905 20848 -3 - 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229929.peg.1242 CDS AZTP01000032.1 23684 22932 -2 - 753 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229929.peg.1243 CDS AZTP01000032.1 25177 24137 -1 - 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229929.peg.1244 CDS AZTP01000032.1 25318 26133 1 + 816 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229929.peg.1245 CDS AZTP01000032.1 26143 26727 1 + 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229929.peg.1246 CDS AZTP01000032.1 26728 27930 1 + 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229929.peg.1247 CDS AZTP01000032.1 27977 29128 2 + 1152 Sugar efflux transporter SotB - none -
fig|6666666.229929.peg.1248 CDS AZTP01000032.1 29539 29198 -1 - 342 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229929.peg.1249 CDS AZTP01000033.1 1382 2365 2 + 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229929.peg.1250 CDS AZTP01000033.1 2388 2678 3 + 291 hypothetical protein - none -
fig|6666666.229929.peg.1251 CDS AZTP01000033.1 4041 2743 -3 - 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229929.peg.1252 CDS AZTP01000033.1 5094 4129 -3 - 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229929.peg.1253 CDS AZTP01000033.1 6445 5108 -1 - 1338 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229929.peg.1254 CDS AZTP01000034.1 2247 745 -3 - 1503 Sodium-dependent transporter - none -
fig|6666666.229929.peg.1255 CDS AZTP01000034.1 2528 2400 -2 - 129 hypothetical protein - none -
fig|6666666.229929.peg.1256 CDS AZTP01000034.1 2791 2940 1 + 150 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229929.peg.1257 CDS AZTP01000034.1 2942 3658 2 + 717 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229929.peg.1258 CDS AZTP01000034.1 4599 3697 -3 - 903 hypothetical protein - none -
fig|6666666.229929.peg.1259 CDS AZTP01000034.1 6504 4645 -3 - 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229929.peg.1260 CDS AZTP01000034.1 7895 6501 -2 - 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229929.peg.1261 CDS AZTP01000034.1 8014 7898 -1 - 117 hypothetical protein - none -
fig|6666666.229929.peg.1262 CDS AZTP01000034.1 8046 9761 3 + 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229929.peg.1263 CDS AZTP01000034.1 9859 9722 -1 - 138 hypothetical protein - none -
fig|6666666.229929.peg.1264 CDS AZTP01000034.1 9828 10157 3 + 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229929.peg.1265 CDS AZTP01000034.1 10197 10451 3 + 255 YgfY COG2938 - none -
fig|6666666.229929.peg.1266 CDS AZTP01000034.1 10584 11159 3 + 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229929.peg.1267 CDS AZTP01000034.1 11198 11782 2 + 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229929.peg.1268 CDS AZTP01000034.1 11864 12820 2 + 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229929.peg.1269 CDS AZTP01000034.1 12830 13267 2 + 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229929.peg.1270 CDS AZTP01000034.1 13673 14185 2 + 513 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229929.peg.1271 CDS AZTP01000034.1 14280 15035 3 + 756 Short chain dehydrogenase - none -
fig|6666666.229929.peg.1272 CDS AZTP01000034.1 16575 15115 -3 - 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229929.peg.1273 CDS AZTP01000034.1 16697 17161 2 + 465 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229929.peg.1274 CDS AZTP01000034.1 17131 17265 1 + 135 hypothetical protein - none -
fig|6666666.229929.peg.1275 CDS AZTP01000034.1 19594 17252 -1 - 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229929.peg.1276 CDS AZTP01000034.1 20220 19660 -3 - 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229929.peg.1277 CDS AZTP01000034.1 20422 21027 1 + 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229929.peg.1278 CDS AZTP01000034.1 22329 21079 -3 - 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229929.peg.1279 CDS AZTP01000034.1 22466 22347 -2 - 120 hypothetical protein - none -
fig|6666666.229929.peg.1280 CDS AZTP01000034.1 22589 22897 2 + 309 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229929.peg.1281 CDS AZTP01000034.1 22897 24786 1 + 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229929.peg.1282 CDS AZTP01000034.1 24883 27303 1 + 2421 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229929.peg.1283 CDS AZTP01000034.1 28274 27360 -2 - 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229929.peg.1284 CDS AZTP01000035.1 1528 299 -1 - 1230 Tyrosine-specific transport protein - none -
fig|6666666.229929.peg.1285 CDS AZTP01000035.1 2338 1655 -1 - 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229929.peg.1286 CDS AZTP01000035.1 3625 2354 -1 - 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229929.peg.1287 CDS AZTP01000035.1 4188 3943 -3 - 246 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229929.peg.1288 CDS AZTP01000035.1 4279 4392 1 + 114 hypothetical protein - none -
fig|6666666.229929.peg.1289 CDS AZTP01000035.1 4504 4638 1 + 135 hypothetical protein - none -
fig|6666666.229929.peg.1290 CDS AZTP01000035.1 4799 4635 -2 - 165 hypothetical protein - none -
fig|6666666.229929.peg.1291 CDS AZTP01000036.1 11 796 2 + 786 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229929.peg.1292 CDS AZTP01000036.1 879 1202 3 + 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229929.peg.1293 CDS AZTP01000036.1 1406 2860 2 + 1455 Esterase/lipase - none -
fig|6666666.229929.peg.1294 CDS AZTP01000036.1 4486 3113 -1 - 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229929.peg.1295 CDS AZTP01000036.1 6496 4562 -1 - 1935 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) Multidrug Resistance Efflux Pumps
fig|6666666.229929.peg.1296 CDS AZTP01000036.1 7694 6516 -2 - 1179 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229929.peg.1297 CDS AZTP01000036.1 7895 9586 2 + 1692 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229929.peg.1298 CDS AZTP01000036.1 9841 9984 1 + 144 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.1299 CDS AZTP01000036.1 9994 10290 1 + 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.1300 CDS AZTP01000036.1 10358 10792 2 + 435 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229929.peg.1301 CDS AZTP01000036.1 10892 11440 2 + 549 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229929.peg.1302 CDS AZTP01000036.1 11453 13648 2 + 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229929.peg.1303 CDS AZTP01000036.1 13645 15654 1 + 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229929.peg.1304 CDS AZTP01000036.1 15681 16991 3 + 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229929.peg.1305 CDS AZTP01000036.1 17198 18637 2 + 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229929.peg.1306 CDS AZTP01000036.1 18761 21226 2 + 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229929.peg.1307 CDS AZTP01000036.1 21390 21241 -3 - 150 hypothetical protein - none -
fig|6666666.229929.peg.1308 CDS AZTP01000036.1 21949 21344 -1 - 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229929.peg.1309 CDS AZTP01000036.1 22163 22450 2 + 288 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.229929.peg.1310 CDS AZTP01000036.1 22605 22489 -3 - 117 hypothetical protein - none -
fig|6666666.229929.peg.1311 CDS AZTP01000036.1 22598 23206 2 + 609 lipoprotein HlpB - none -
fig|6666666.229929.peg.1312 CDS AZTP01000036.1 23353 24234 1 + 882 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229929.peg.1313 CDS AZTP01000036.1 24412 25740 1 + 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229929.peg.1314 CDS AZTP01000036.1 25844 29305 2 + 3462 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229929.peg.1315 CDS AZTP01000036.1 29326 30066 1 + 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229929.peg.1316 CDS AZTP01000036.1 30066 34556 3 + 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229929.peg.1317 CDS AZTP01000036.1 34633 35586 1 + 954 Integral membrane protein - none -
fig|6666666.229929.peg.1318 CDS AZTP01000036.1 35598 37025 3 + 1428 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229929.peg.1319 CDS AZTP01000037.1 1519 248 -1 - 1272 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) - none -
fig|6666666.229929.peg.1320 CDS AZTP01000037.1 2420 1530 -2 - 891 Forms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9) - none -
fig|6666666.229929.peg.1321 CDS AZTP01000037.1 3127 2417 -1 - 711 Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB8 - none -
fig|6666666.229929.peg.1322 CDS AZTP01000037.1 3971 3162 -2 - 810 hypothetical protein - none -
fig|6666666.229929.peg.1323 CDS AZTP01000037.1 5111 4383 -2 - 729 Minor pilin of type IV secretion complex, VirB5 - none -
fig|6666666.229929.peg.1324 CDS AZTP01000037.1 7861 5189 -1 - 2673 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229929.peg.1325 CDS AZTP01000037.1 8342 8040 -2 - 303 Major pilus subunit of type IV secretion complex, VirB2 - none -
fig|6666666.229929.peg.1326 CDS AZTP01000038.1 787 158 -1 - 630 Exopolysaccharide biosynthesis protein - none -
fig|6666666.229929.peg.1327 CDS AZTP01000038.1 1812 841 -3 - 972 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229929.peg.1328 CDS AZTP01000038.1 1873 2352 1 + 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229929.peg.1329 CDS AZTP01000038.1 4211 2466 -2 - 1746 Ferrichrome-iron receptor - none -
fig|6666666.229929.peg.1330 CDS AZTP01000038.1 6403 4265 -1 - 2139 Ferrichrome-iron receptor - none -
fig|6666666.229929.peg.1331 CDS AZTP01000038.1 8070 6673 -3 - 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229929.peg.1332 CDS AZTP01000038.1 8097 8711 3 + 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229929.peg.1333 CDS AZTP01000038.1 9037 8744 -1 - 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229929.peg.1334 CDS AZTP01000038.1 9330 9034 -3 - 297 Phage-related protein - none -
fig|6666666.229929.peg.1335 CDS AZTP01000038.1 9501 9803 3 + 303 FIG004454: RNA binding protein - none -
fig|6666666.229929.peg.1336 CDS AZTP01000038.1 10354 9878 -1 - 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229929.peg.1337 CDS AZTP01000038.1 10514 11956 2 + 1443 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229929.peg.1338 CDS AZTP01000038.1 12723 12067 -3 - 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229929.peg.1339 CDS AZTP01000038.1 12853 14067 1 + 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229929.peg.1340 CDS AZTP01000038.1 14083 14814 1 + 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229929.peg.1341 CDS AZTP01000038.1 15092 14946 -2 - 147 hypothetical protein - none -
fig|6666666.229929.peg.1342 CDS AZTP01000038.1 15972 15055 -3 - 918 Mobile element protein - none -
fig|6666666.229929.peg.1343 CDS AZTP01000038.1 16086 16271 3 + 186 hypothetical protein - none -
fig|6666666.229929.peg.1344 CDS AZTP01000038.1 17061 16261 -3 - 801 Cell filamentation protein fic - none -
fig|6666666.229929.peg.1345 CDS AZTP01000038.1 17341 17063 -1 - 279 hypothetical protein - none -
fig|6666666.229929.peg.1346 CDS AZTP01000039.1 414 548 3 + 135 hypothetical protein - none -
fig|6666666.229929.peg.1347 CDS AZTP01000039.1 2617 1022 -1 - 1596 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229929.peg.1348 CDS AZTP01000039.1 4632 3871 -3 - 762 Flp pilus assembly protein TadD, contains TPR repeat Widespread colonization island
fig|6666666.229929.peg.1349 CDS AZTP01000039.1 5488 4622 -1 - 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229929.peg.1350 CDS AZTP01000039.1 6372 5485 -3 - 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229929.peg.1351 CDS AZTP01000039.1 7652 6372 -2 - 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229929.peg.1352 CDS AZTP01000039.1 8790 7666 -3 - 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229929.peg.1353 CDS AZTP01000039.1 9309 8806 -3 - 504 Flp pilus assembly protein RcpB Widespread colonization island
fig|6666666.229929.peg.1354 CDS AZTP01000039.1 10568 9306 -2 - 1263 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229929.peg.1355 CDS AZTP01000039.1 11514 10690 -3 - 825 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229929.peg.1356 CDS AZTP01000039.1 11746 11570 -1 - 177 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229929.peg.1357 CDS AZTP01000039.1 13130 13594 2 + 465 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229929.peg.1358 CDS AZTP01000039.1 13757 14458 2 + 702 unknown - none -
fig|6666666.229929.peg.1359 CDS AZTP01000039.1 14462 16384 2 + 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229929.peg.1360 CDS AZTP01000039.1 16426 16599 1 + 174 hypothetical protein - none -
fig|6666666.229929.peg.1361 CDS AZTP01000039.1 16727 20197 2 + 3471 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229929.peg.1362 CDS AZTP01000039.1 20286 20870 3 + 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229929.peg.1363 CDS AZTP01000039.1 21032 21745 2 + 714 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229929.peg.1364 CDS AZTP01000039.1 21766 22485 1 + 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229929.peg.1365 CDS AZTP01000039.1 22490 23152 2 + 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229929.peg.1366 CDS AZTP01000039.1 23155 23838 1 + 684 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229929.peg.1367 CDS AZTP01000039.1 24379 25977 1 + 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229929.peg.1368 CDS AZTP01000039.1 26239 26697 1 + 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229929.peg.1369 CDS AZTP01000039.1 26807 27775 2 + 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229929.peg.1370 CDS AZTP01000039.1 27775 28092 1 + 318 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229929.peg.1371 CDS AZTP01000039.1 28110 29933 3 + 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229929.peg.1372 CDS AZTP01000039.1 29951 31417 2 + 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229929.peg.1373 CDS AZTP01000039.1 31425 32804 3 + 1380 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229929.peg.1374 CDS AZTP01000039.1 32798 33883 2 + 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229929.peg.1375 CDS AZTP01000039.1 33910 35214 1 + 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229929.peg.1376 CDS AZTP01000039.1 35229 36419 3 + 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229929.peg.1377 CDS AZTP01000039.1 36459 37523 3 + 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229929.peg.1378 CDS AZTP01000039.1 37594 39024 1 + 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229929.peg.1379 CDS AZTP01000039.1 39037 39966 1 + 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229929.peg.1380 CDS AZTP01000039.1 39963 40730 3 + 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229929.peg.1381 CDS AZTP01000039.1 40755 42035 3 + 1281 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229929.peg.1382 CDS AZTP01000039.1 42121 43398 1 + 1278 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229929.peg.1383 CDS AZTP01000039.1 43436 44353 2 + 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) KDO2-Lipid A biosynthesis
fig|6666666.229929.peg.1384 CDS AZTP01000039.1 44555 45718 2 + 1164 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229929.peg.1385 CDS AZTP01000039.1 45852 47732 3 + 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229929.peg.1386 CDS AZTP01000039.1 47800 48144 1 + 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352
fig|6666666.229929.peg.1387 CDS AZTP01000039.1 48172 49305 1 + 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229929.peg.1388 CDS AZTP01000039.1 49307 49987 2 + 681 FIG009095: D,D-carboxypeptidase family protein CBSS-584.1.peg.1352
fig|6666666.229929.peg.1389 CDS AZTP01000039.1 50234 50857 2 + 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229929.peg.1390 CDS AZTP01000039.1 50908 51732 1 + 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229929.peg.1391 CDS AZTP01000039.1 53022 52195 -3 - 828 FIG00711691: hypothetical protein - none -
fig|6666666.229929.peg.1392 CDS AZTP01000039.1 53459 52995 -2 - 465 FIG00710847: hypothetical protein - none -
fig|6666666.229929.peg.1393 CDS AZTP01000039.1 53775 53638 -3 - 138 hypothetical protein - none -
fig|6666666.229929.peg.1394 CDS AZTP01000039.1 53795 54493 2 + 699 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229929.peg.1395 CDS AZTP01000039.1 54618 55832 3 + 1215 ATPase component BioM of energizing module of biotin ECF transporter ECF class transporters
fig|6666666.229929.peg.1396 CDS AZTP01000039.1 56945 55917 -2 - 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.1397 CDS AZTP01000039.1 57151 57285 1 + 135 hypothetical protein - none -
fig|6666666.229929.peg.1398 CDS AZTP01000039.1 57364 59526 1 + 2163 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229929.peg.1399 CDS AZTP01000039.1 59969 59625 -2 - 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229929.peg.1400 CDS AZTP01000039.1 60371 59979 -2 - 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229929.peg.1401 CDS AZTP01000039.1 61153 60383 -1 - 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229929.peg.1402 CDS AZTP01000039.1 62966 61158 -2 - 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase;
TCA Cycle
fig|6666666.229929.peg.1403 CDS AZTP01000039.1 63277 64248 1 + 972 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229929.peg.1404 CDS AZTP01000039.1 64483 64304 -1 - 180 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229929.peg.1405 CDS AZTP01000039.1 65695 64625 -1 - 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229929.peg.1406 CDS AZTP01000040.1 59 661 2 + 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229929.peg.1407 CDS AZTP01000040.1 693 2630 3 + 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229929.peg.1408 CDS AZTP01000040.1 2791 3141 1 + 351 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.229929.peg.1409 CDS AZTP01000040.1 3326 3580 2 + 255 hypothetical protein - none -
fig|6666666.229929.peg.1410 CDS AZTP01000040.1 5054 3891 -2 - 1164 Na+/H+ antiporter NhaA type NhaA, NhaD and Sodium-dependent phosphate transporters
fig|6666666.229929.peg.1411 CDS AZTP01000040.1 5999 5226 -2 - 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229929.peg.1412 CDS AZTP01000040.1 6285 5977 -3 - 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229929.peg.1413 CDS AZTP01000040.1 8540 6318 -2 - 2223 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229929.peg.1414 CDS AZTP01000041.1 884 135 -2 - 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229929.peg.1415 CDS AZTP01000041.1 1576 848 -1 - 729 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229929.peg.1416 CDS AZTP01000041.1 2346 2462 3 + 117 Mobile element protein - none -
fig|6666666.229929.peg.1417 CDS AZTP01000041.1 3157 3041 -1 - 117 hypothetical protein - none -
fig|6666666.229929.peg.1418 CDS AZTP01000042.1 44 601 2 + 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229929.peg.1419 CDS AZTP01000042.1 630 1913 3 + 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229929.peg.1420 CDS AZTP01000042.1 1935 2654 3 + 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229929.peg.1421 CDS AZTP01000042.1 2669 3538 2 + 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) CBSS-316407.3.peg.1371;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.1422 CDS AZTP01000042.1 3547 4881 1 + 1335 Membrane-associated zinc metalloprotease - none -
fig|6666666.229929.peg.1423 CDS AZTP01000042.1 4906 7311 1 + 2406 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229929.peg.1424 CDS AZTP01000043.1 383 180 -2 - 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229929.peg.1425 CDS AZTP01000043.1 1402 470 -1 - 933 Biotin--protein ligase (EC 6.3.4.9, EC 6.3.4.10, EC 6.3.4.11, EC 6.3.4.15) - none -
fig|6666666.229929.peg.1426 CDS AZTP01000043.1 1544 3010 2 + 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.229929.peg.1427 CDS AZTP01000043.1 3186 3365 3 + 180 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229929.peg.1428 CDS AZTP01000043.1 4036 3764 -1 - 273 ImpA - none -
fig|6666666.229929.peg.1429 CDS AZTP01000043.1 4158 4343 3 + 186 hypothetical protein - none -
fig|6666666.229929.peg.1430 CDS AZTP01000043.1 4563 4895 3 + 333 Mobile element protein - none -
fig|6666666.229929.peg.1431 CDS AZTP01000043.1 4883 5044 2 + 162 Mobile element protein - none -
fig|6666666.229929.peg.1432 CDS AZTP01000043.1 5189 6169 2 + 981 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229929.peg.1433 CDS AZTP01000043.1 6331 7158 1 + 828 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229929.peg.1434 CDS AZTP01000043.1 7190 8527 2 + 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229929.peg.1435 CDS AZTP01000043.1 8540 9007 2 + 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229929.peg.1436 CDS AZTP01000043.1 9230 9691 2 + 462 FIG00696317: hypothetical protein - none -
fig|6666666.229929.peg.1437 CDS AZTP01000044.1 124 1656 1 + 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229929.peg.1438 CDS AZTP01000044.1 2534 1776 -2 - 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229929.peg.1439 CDS AZTP01000044.1 3424 2546 -1 - 879 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229929.peg.1440 CDS AZTP01000044.1 4442 3477 -2 - 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229929.peg.1441 CDS AZTP01000044.1 5401 4502 -1 - 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229929.peg.1442 CDS AZTP01000044.1 5627 7603 2 + 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229929.peg.1443 CDS AZTP01000044.1 8599 7682 -1 - 918 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229929.peg.1444 CDS AZTP01000044.1 8973 9389 3 + 417 Protein ygiW precursor - none -
fig|6666666.229929.peg.1445 CDS AZTP01000044.1 9541 10269 1 + 729 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229929.peg.1446 CDS AZTP01000045.1 1870 101 -1 - 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229929.peg.1447 CDS AZTP01000045.1 2349 2104 -3 - 246 FIG00696862: hypothetical protein - none -
fig|6666666.229929.peg.1448 CDS AZTP01000045.1 3880 2543 -1 - 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229929.peg.1449 CDS AZTP01000045.1 4796 3969 -2 - 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229929.peg.1450 CDS AZTP01000045.1 5014 4901 -1 - 114 hypothetical protein - none -
fig|6666666.229929.peg.1451 CDS AZTP01000045.1 5161 6744 1 + 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229929.peg.1452 CDS AZTP01000045.1 7119 6820 -3 - 300 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.1453 CDS AZTP01000045.1 7407 7129 -3 - 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.1454 CDS AZTP01000045.1 10423 7490 -1 - 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229929.peg.1455 CDS AZTP01000045.1 10846 13344 1 + 2499 CRISPR-associated protein Cas3@1@1 CRISPRs
fig|6666666.229929.peg.1456 CDS AZTP01000045.1 13567 14250 1 + 684 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229929.peg.1457 CDS AZTP01000045.1 14247 14594 3 + 348 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229929.peg.1458 CDS AZTP01000045.1 14648 15085 2 + 438 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229929.peg.1459 CDS AZTP01000045.1 15338 16129 2 + 792 hypothetical protein - none -
fig|6666666.229929.peg.1460 CDS AZTP01000045.1 16505 17518 2 + 1014 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229929.peg.1461 CDS AZTP01000045.1 17603 17815 2 + 213 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229929.peg.1462 CDS AZTP01000045.1 18879 19883 3 + 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229929.peg.1463 CDS AZTP01000045.1 19892 21520 2 + 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229929.peg.1464 CDS AZTP01000045.1 21504 22139 3 + 636 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229929.peg.1465 CDS AZTP01000045.1 22219 22527 1 + 309 FIG022160: hypothetical toxin - none -
fig|6666666.229929.peg.1466 CDS AZTP01000045.1 22524 22814 3 + 291 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229929.peg.1467 CDS AZTP01000045.1 22830 23834 3 + 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis Experimental
fig|6666666.229929.peg.1468 CDS AZTP01000045.1 26581 25115 -1 - 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229929.peg.1469 CDS AZTP01000045.1 27959 26829 -2 - 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229929.peg.1470 CDS AZTP01000045.1 29945 28095 -2 - 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229929.peg.1471 CDS AZTP01000045.1 30995 30009 -2 - 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229929.peg.1472 CDS AZTP01000045.1 31237 31938 1 + 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229929.peg.1473 CDS AZTP01000045.1 31953 32837 3 + 885 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229929.peg.1474 CDS AZTP01000045.1 32847 33716 3 + 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229929.peg.1475 CDS AZTP01000045.1 33726 34604 3 + 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229929.peg.1476 CDS AZTP01000045.1 34711 35514 1 + 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229929.peg.1477 CDS AZTP01000045.1 35594 36715 2 + 1122 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229929.peg.1478 CDS AZTP01000045.1 37083 37223 3 + 141 hypothetical protein - none -
fig|6666666.229929.peg.1479 CDS AZTP01000045.1 37761 37261 -3 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229929.peg.1480 CDS AZTP01000045.1 38867 37803 -2 - 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229929.peg.1481 CDS AZTP01000045.1 39282 38860 -3 - 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229929.peg.1482 CDS AZTP01000045.1 42327 39292 -3 - 3036 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229929.peg.1483 CDS AZTP01000045.1 42827 43867 2 + 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229929.peg.1484 CDS AZTP01000045.1 43969 44109 1 + 141 hypothetical protein - none -
fig|6666666.229929.peg.1485 CDS AZTP01000045.1 44081 44278 2 + 198 LemA family protein - none -
fig|6666666.229929.peg.1486 CDS AZTP01000045.1 44655 44984 3 + 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229929.peg.1487 CDS AZTP01000045.1 45109 45561 1 + 453 putative membrane protein - none -
fig|6666666.229929.peg.1488 CDS AZTP01000045.1 45562 45951 1 + 390 COG2363 - none -
fig|6666666.229929.peg.1489 CDS AZTP01000045.1 46020 50060 3 + 4041 HrpA-like helicases - none -
fig|6666666.229929.peg.1490 CDS AZTP01000045.1 50070 50927 3 + 858 conserved hypothetical protein - none -
fig|6666666.229929.peg.1491 CDS AZTP01000045.1 51024 51209 3 + 186 hypothetical protein - none -
fig|6666666.229929.peg.1492 CDS AZTP01000045.1 51852 51187 -3 - 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229929.peg.1493 CDS AZTP01000046.1 2482 824 -1 - 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229929.peg.1494 CDS AZTP01000046.1 2606 4423 2 + 1818 ABC transporter ATP-binding protein - none -
fig|6666666.229929.peg.1495 CDS AZTP01000046.1 7803 5278 -3 - 2526 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229929.peg.1496 CDS AZTP01000046.1 8882 8127 -2 - 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229929.peg.1497 CDS AZTP01000046.1 9819 8944 -3 - 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229929.peg.1498 CDS AZTP01000046.1 9862 10176 1 + 315 Uncharacterized protein PM1437 - none -
fig|6666666.229929.peg.1499 CDS AZTP01000046.1 10513 10187 -1 - 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229929.peg.1500 CDS AZTP01000046.1 11074 10526 -1 - 549 FIG00903983: hypothetical protein - none -
fig|6666666.229929.peg.1501 CDS AZTP01000046.1 12814 11201 -1 - 1614 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229929.peg.1502 CDS AZTP01000046.1 12959 13507 2 + 549 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229929.peg.1503 CDS AZTP01000046.1 13512 14063 3 + 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229929.peg.1504 CDS AZTP01000046.1 14067 14867 3 + 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229929.peg.1505 CDS AZTP01000046.1 15743 14862 -2 - 882 Protein rarD - none -
fig|6666666.229929.peg.1506 CDS AZTP01000046.1 15934 15776 -1 - 159 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229929.peg.1507 CDS AZTP01000046.1 15955 16821 1 + 867 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229929.peg.1508 CDS AZTP01000046.1 17055 16810 -3 - 246 hypothetical protein - none -
fig|6666666.229929.peg.1509 CDS AZTP01000046.1 17279 17416 2 + 138 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229929.peg.1510 CDS AZTP01000046.1 17569 18039 1 + 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229929.peg.1511 CDS AZTP01000046.1 18156 20258 3 + 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229929.peg.1512 CDS AZTP01000047.1 1778 144 -2 - 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229929.peg.1513 CDS AZTP01000047.1 1892 3307 2 + 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229929.peg.1514 CDS AZTP01000049.1 183 635 3 + 453 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229929.peg.1515 CDS AZTP01000049.1 632 2116 2 + 1485 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229929.peg.1516 CDS AZTP01000049.1 2116 3978 1 + 1863 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229929.peg.1517 CDS AZTP01000049.1 3982 4926 1 + 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229929.peg.1518 CDS AZTP01000049.1 5046 5342 3 + 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229929.peg.1519 CDS AZTP01000049.1 5357 5497 2 + 141 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229929.peg.1520 CDS AZTP01000049.1 6647 5688 -2 - 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229929.peg.1521 CDS AZTP01000049.1 7803 6724 -3 - 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229929.peg.1522 CDS AZTP01000049.1 9223 7817 -1 - 1407 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229929.peg.1523 CDS AZTP01000049.1 9472 11130 1 + 1659 Peptide transport periplasmic protein sapA (TC 3.A.1.5.5) - none -
fig|6666666.229929.peg.1524 CDS AZTP01000049.1 11130 12095 3 + 966 Peptide transport system permease protein SapB - none -
fig|6666666.229929.peg.1525 CDS AZTP01000049.1 12085 12972 1 + 888 Peptide transport system permease protein SapC - none -
fig|6666666.229929.peg.1526 CDS AZTP01000049.1 12980 14032 2 + 1053 Peptide transport system ATP-binding protein SapD - none -
fig|6666666.229929.peg.1527 CDS AZTP01000049.1 14036 14854 2 + 819 Peptide transport system ATP-binding protein SapF - none -
fig|6666666.229929.peg.1528 CDS AZTP01000050.1 1633 179 -1 - 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229929.peg.1529 CDS AZTP01000050.1 2256 1798 -3 - 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229929.peg.1530 CDS AZTP01000050.1 2590 2336 -1 - 255 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229929.peg.1531 CDS AZTP01000050.1 2746 2603 -1 - 144 Aspartate racemase (EC 5.1.1.13) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229929.peg.1532 CDS AZTP01000050.1 3571 3341 -1 - 231 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229929.peg.1533 CDS AZTP01000051.1 2102 618 -2 - 1485 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229929.peg.1534 CDS AZTP01000051.1 2993 2184 -2 - 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229929.peg.1535 CDS AZTP01000051.1 3459 3031 -3 - 429 hypothetical protein - none -
fig|6666666.229929.peg.1536 CDS AZTP01000051.1 5527 3521 -1 - 2007 oligopeptide transporter - none -
fig|6666666.229929.peg.1537 CDS AZTP01000051.1 5895 6521 3 + 627 membrane protein ykgB - none -
fig|6666666.229929.peg.1538 CDS AZTP01000051.1 6592 7473 1 + 882 Transcriptional regulator, AraC family - none -
fig|6666666.229929.peg.1539 CDS AZTP01000051.1 8026 7478 -1 - 549 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229929.peg.1540 CDS AZTP01000051.1 8107 8766 1 + 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229929.peg.1541 CDS AZTP01000051.1 8779 9195 1 + 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229929.peg.1542 CDS AZTP01000051.1 9264 10136 3 + 873 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229929.peg.1543 CDS AZTP01000051.1 10255 10371 1 + 117 hypothetical protein - none -
fig|6666666.229929.peg.1544 CDS AZTP01000051.1 10548 10778 3 + 231 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229929.peg.1545 CDS AZTP01000051.1 10782 11444 3 + 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229929.peg.1546 CDS AZTP01000051.1 11482 12243 1 + 762 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229929.peg.1547 CDS AZTP01000051.1 12265 13287 1 + 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229929.peg.1548 CDS AZTP01000051.1 15558 13429 -3 - 2130 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229929.peg.1549 CDS AZTP01000051.1 16294 15551 -1 - 744 ATPase family protein - none -
fig|6666666.229929.peg.1550 CDS AZTP01000051.1 17419 16301 -1 - 1119 ATPase family protein - none -
fig|6666666.229929.peg.1551 CDS AZTP01000051.1 17701 17468 -1 - 234 FIG074102: hypothetical protein - none -
fig|6666666.229929.peg.1552 CDS AZTP01000051.1 18497 17667 -2 - 831 FIG074102: hypothetical protein - none -
fig|6666666.229929.peg.1553 CDS AZTP01000051.1 18797 18537 -2 - 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229929.peg.1554 CDS AZTP01000051.1 19752 18847 -3 - 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229929.peg.1555 CDS AZTP01000051.1 20104 19871 -1 - 234 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229929.peg.1556 CDS AZTP01000051.1 20781 20119 -3 - 663 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229929.peg.1557 CDS AZTP01000051.1 21621 20782 -3 - 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.5.3) - none -
fig|6666666.229929.peg.1558 CDS AZTP01000051.1 22240 21623 -1 - 618 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3) - none -
fig|6666666.229929.peg.1559 CDS AZTP01000051.1 24605 22251 -2 - 2355 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.5.3) - none -
fig|6666666.229929.peg.1560 CDS AZTP01000051.1 24946 24806 -1 - 141 hypothetical protein - none -
fig|6666666.229929.peg.1561 CDS AZTP01000051.1 25444 25557 1 + 114 hypothetical protein - none -
fig|6666666.229929.peg.1562 CDS AZTP01000051.1 26574 25828 -3 - 747 cell filamentation-like protein - none -
fig|6666666.229929.peg.1563 CDS AZTP01000051.1 27012 26827 -3 - 186 hypothetical protein - none -
fig|6666666.229929.peg.1564 CDS AZTP01000051.1 28140 27241 -3 - 900 cell filamentation-like protein - none -
fig|6666666.229929.peg.1565 CDS AZTP01000051.1 28300 28121 -1 - 180 hypothetical protein - none -
fig|6666666.229929.peg.1566 CDS AZTP01000051.1 28755 28603 -3 - 153 hypothetical protein - none -
fig|6666666.229929.peg.1567 CDS AZTP01000051.1 30643 29972 -1 - 672 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229929.peg.1568 CDS AZTP01000051.1 31186 30740 -1 - 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229929.peg.1569 CDS AZTP01000051.1 31660 31190 -1 - 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229929.peg.1570 CDS AZTP01000051.1 33092 31830 -2 - 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229929.peg.1571 CDS AZTP01000051.1 33959 33168 -2 - 792 FIG001154: CcsA-related protein - none -
fig|6666666.229929.peg.1572 CDS AZTP01000051.1 34113 35492 3 + 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229929.peg.1573 CDS AZTP01000051.1 35725 35531 -1 - 195 hypothetical protein - none -
fig|6666666.229929.peg.1574 CDS AZTP01000051.1 36899 36069 -2 - 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229929.peg.1575 CDS AZTP01000051.1 38054 36930 -2 - 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229929.peg.1576 CDS AZTP01000051.1 38193 38600 3 + 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229929.peg.1577 CDS AZTP01000051.1 39462 38713 -3 - 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229929.peg.1578 CDS AZTP01000051.1 40576 39614 -1 - 963 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) - none -
fig|6666666.229929.peg.1579 CDS AZTP01000051.1 42171 40912 -3 - 1260 Adenylosuccinate lyase (EC 4.3.2.2) Purine conversions
fig|6666666.229929.peg.1580 CDS AZTP01000052.1 687 1097 3 + 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229929.peg.1581 CDS AZTP01000052.1 1235 1771 2 + 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229929.peg.1582 CDS AZTP01000052.1 1838 2770 2 + 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229929.peg.1583 CDS AZTP01000052.1 2849 3712 2 + 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229929.peg.1584 CDS AZTP01000052.1 3727 4554 1 + 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229929.peg.1585 CDS AZTP01000052.1 4645 5064 1 + 420 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229929.peg.1586 CDS AZTP01000052.1 5048 5341 2 + 294 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229929.peg.1587 CDS AZTP01000052.1 5369 6001 2 + 633 FIG00696423: hypothetical protein - none -
fig|6666666.229929.peg.1588 CDS AZTP01000052.1 6122 8710 2 + 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229929.peg.1589 CDS AZTP01000052.1 8863 8735 -1 - 129 hypothetical protein - none -
fig|6666666.229929.peg.1590 CDS AZTP01000052.1 8852 9355 2 + 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229929.peg.1591 CDS AZTP01000052.1 9355 10389 1 + 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229929.peg.1592 CDS AZTP01000052.1 11282 10878 -2 - 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229929.peg.1593 CDS AZTP01000052.1 14058 11359 -3 - 2700 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229929.peg.1594 CDS AZTP01000052.1 14394 14131 -3 - 264 hypothetical protein - none -
fig|6666666.229929.peg.1595 CDS AZTP01000052.1 14573 14445 -2 - 129 hypothetical protein - none -
fig|6666666.229929.peg.1596 CDS AZTP01000052.1 14540 14851 2 + 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229929.peg.1597 CDS AZTP01000052.1 14972 15382 2 + 411 Mercuric resistance operon regulatory protein - none -
fig|6666666.229929.peg.1598 CDS AZTP01000052.1 18281 15450 -2 - 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229929.peg.1599 CDS AZTP01000052.1 18452 18931 2 + 480 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229929.peg.1600 CDS AZTP01000052.1 19603 19025 -1 - 579 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229929.peg.1601 CDS AZTP01000052.1 19743 19603 -3 - 141 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229929.peg.1602 CDS AZTP01000052.1 21458 19737 -2 - 1722 DNA helicase, UvrD/REP family - none -
fig|6666666.229929.peg.1603 CDS AZTP01000052.1 22721 21867 -2 - 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229929.peg.1604 CDS AZTP01000052.1 23812 22724 -1 - 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229929.peg.1605 CDS AZTP01000052.1 24366 23839 -3 - 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229929.peg.1606 CDS AZTP01000052.1 25987 24623 -1 - 1365 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229929.peg.1607 CDS AZTP01000052.1 26400 26008 -3 - 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229929.peg.1608 CDS AZTP01000052.1 26924 26400 -2 - 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229929.peg.1609 CDS AZTP01000052.1 27439 26921 -1 - 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229929.peg.1610 CDS AZTP01000052.1 28259 27450 -2 - 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229929.peg.1611 CDS AZTP01000053.1 24 2384 3 + 2361 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229929.peg.1612 CDS AZTP01000053.1 2481 3326 3 + 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229929.peg.1613 CDS AZTP01000053.1 3421 4791 1 + 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229929.peg.1614 CDS AZTP01000053.1 5568 4924 -3 - 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229929.peg.1615 CDS AZTP01000053.1 5824 5606 -1 - 219 FIG00696234: hypothetical protein - none -
fig|6666666.229929.peg.1616 CDS AZTP01000053.1 6447 5848 -3 - 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229929.peg.1617 CDS AZTP01000053.1 6902 6447 -2 - 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229929.peg.1618 CDS AZTP01000053.1 8170 6971 -1 - 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229929.peg.1619 CDS AZTP01000053.1 8348 9007 2 + 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229929.peg.1620 CDS AZTP01000053.1 9279 9452 3 + 174 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.229929.peg.1621 CDS AZTP01000053.1 9464 9634 2 + 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229929.peg.1622 CDS AZTP01000053.1 9675 10532 3 + 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229929.peg.1623 CDS AZTP01000053.1 11587 10535 -1 - 1053 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229929.peg.1624 CDS AZTP01000053.1 12619 11597 -1 - 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229929.peg.1625 CDS AZTP01000053.1 13312 12620 -1 - 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229929.peg.1626 CDS AZTP01000053.1 13586 13374 -2 - 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229929.peg.1627 CDS AZTP01000053.1 13845 14693 3 + 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229929.peg.1628 CDS AZTP01000053.1 14718 15707 3 + 990 putative capsular polysaccharide synthesis protein - none -
fig|6666666.229929.peg.1629 CDS AZTP01000053.1 16569 15709 -3 - 861 Involved in lipopolysaccharide biosynthesis - none -
fig|6666666.229929.peg.1630 CDS AZTP01000053.1 16812 19010 3 + 2199 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229929.peg.1631 CDS AZTP01000054.1 3 362 3 + 360 Mobile element protein - none -
fig|6666666.229929.peg.1632 CDS AZTP01000055.1 986 96 -2 - 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229929.peg.1633 CDS AZTP01000055.1 2552 1008 -2 - 1545 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229929.peg.1634 CDS AZTP01000055.1 3891 2701 -3 - 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229929.peg.1635 CDS AZTP01000055.1 4347 5465 3 + 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229929.peg.1636 CDS AZTP01000055.1 5542 6825 1 + 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229929.peg.1637 CDS AZTP01000055.1 6913 7812 1 + 900 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229929.peg.1638 CDS AZTP01000056.1 101 676 2 + 576 probable periplasmic protein NMA1059 - none -
fig|6666666.229929.peg.1639 CDS AZTP01000056.1 770 1378 2 + 609 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229929.peg.1640 CDS AZTP01000056.1 1667 1449 -2 - 219 hypothetical protein - none -
fig|6666666.229929.peg.1641 CDS AZTP01000056.1 2196 1792 -3 - 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229929.peg.1642 CDS AZTP01000056.1 3652 2321 -1 - 1332 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229929.peg.1643 CDS AZTP01000056.1 3864 4148 3 + 285 hypothetical protein - none -
fig|6666666.229929.peg.1644 CDS AZTP01000056.1 4099 4461 1 + 363 FIG00696564: hypothetical protein - none -
fig|6666666.229929.peg.1645 CDS AZTP01000056.1 4629 4760 3 + 132 hypothetical protein - none -
fig|6666666.229929.peg.1646 CDS AZTP01000056.1 4990 4754 -1 - 237 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229929.peg.1647 CDS AZTP01000056.1 5064 6125 3 + 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229929.peg.1648 CDS AZTP01000056.1 7020 6262 -3 - 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229929.peg.1649 CDS AZTP01000056.1 7505 7053 -2 - 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229929.peg.1650 CDS AZTP01000056.1 7671 8663 3 + 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229929.peg.1651 CDS AZTP01000056.1 9705 8719 -3 - 987 tRNA dihydrouridine synthase A - none -
fig|6666666.229929.peg.1652 CDS AZTP01000057.1 341 1294 2 + 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229929.peg.1653 CDS AZTP01000057.1 1313 1426 2 + 114 hypothetical protein - none -
fig|6666666.229929.peg.1654 CDS AZTP01000057.1 1426 3423 1 + 1998 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229929.peg.1655 CDS AZTP01000057.1 3884 3495 -2 - 390 Endoribonuclease L-PSP - none -
fig|6666666.229929.peg.1656 CDS AZTP01000057.1 4420 3962 -1 - 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229929.peg.1657 CDS AZTP01000057.1 5557 4499 -1 - 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229929.peg.1658 CDS AZTP01000057.1 7003 5702 -1 - 1302 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229929.peg.1659 CDS AZTP01000057.1 7533 7030 -3 - 504 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229929.peg.1660 CDS AZTP01000057.1 7706 8323 2 + 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229929.peg.1661 CDS AZTP01000057.1 8428 9129 1 + 702 probable exported protein STY1423 - none -
fig|6666666.229929.peg.1662 CDS AZTP01000057.1 9136 11151 1 + 2016 Putative uncharacterized protein ydbH - none -
fig|6666666.229929.peg.1663 CDS AZTP01000057.1 11148 11378 3 + 231 hypothetical protein - none -
fig|6666666.229929.peg.1664 CDS AZTP01000057.1 12272 12673 2 + 402 Integrase - none -
fig|6666666.229929.peg.1665 CDS AZTP01000057.1 12670 12834 1 + 165 Integrase - none -
fig|6666666.229929.peg.1666 CDS AZTP01000060.1 706 38 -1 - 669 Mobile element protein - none -
fig|6666666.229929.peg.1667 CDS AZTP01000061.1 466 221 -1 - 246 Huntingtin interacting protein E-like protein - none -
fig|6666666.229929.peg.1668 CDS AZTP01000061.1 655 503 -1 - 153 hypothetical protein - none -
fig|6666666.229929.peg.1669 CDS AZTP01000061.1 800 633 -2 - 168 hypothetical protein - none -
fig|6666666.229929.peg.1670 CDS AZTP01000061.1 2640 1168 -3 - 1473 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229929.peg.1671 CDS AZTP01000061.1 3271 2690 -1 - 582 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229929.peg.1672 CDS AZTP01000061.1 4009 3284 -1 - 726 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229929.peg.1673 CDS AZTP01000061.1 4267 5265 1 + 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229929.peg.1674 CDS AZTP01000061.1 5325 5642 3 + 318 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229929.peg.1675 CDS AZTP01000061.1 5626 6837 1 + 1212 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229929.peg.1676 CDS AZTP01000061.1 6841 7968 1 + 1128 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229929.peg.1677 CDS AZTP01000061.1 8168 8551 2 + 384 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229929.peg.1678 CDS AZTP01000061.1 8578 9435 1 + 858 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229929.peg.1679 CDS AZTP01000062.1 707 1615 2 + 909 Putative surface protein - none -
fig|6666666.229929.peg.1680 CDS AZTP01000062.1 1629 3086 3 + 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.1681 CDS AZTP01000062.1 3149 3355 2 + 207 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229929.peg.1682 CDS AZTP01000062.1 3735 3616 -3 - 120 hypothetical protein - none -
fig|6666666.229929.peg.1683 CDS AZTP01000062.1 4247 4459 2 + 213 Ner-like regulatory protein - none -
fig|6666666.229929.peg.1684 CDS AZTP01000062.1 4469 5935 2 + 1467 Mobile element protein - none -
fig|6666666.229929.peg.1685 CDS AZTP01000062.1 7345 5999 -1 - 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229929.peg.1686 CDS AZTP01000062.1 8264 7368 -2 - 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229929.peg.1687 CDS AZTP01000062.1 8489 8734 2 + 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229929.peg.1688 CDS AZTP01000062.1 8745 9635 3 + 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229929.peg.1689 CDS AZTP01000062.1 9721 11574 1 + 1854 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229929.peg.1690 CDS AZTP01000062.1 12045 11698 -3 - 348 Galactitol utilization operon repressor D-Tagatose and Galactitol Utilization
fig|6666666.229929.peg.1691 CDS AZTP01000063.1 1459 416 -1 - 1044 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) D-Tagatose and Galactitol Utilization
fig|6666666.229929.peg.1692 CDS AZTP01000063.1 1817 1482 -2 - 336 PTS system, galactitol-specific IIC component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229929.peg.1693 CDS AZTP01000063.1 2827 1808 -1 - 1020 PTS system, galactitol-specific IIC component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229929.peg.1694 CDS AZTP01000063.1 3117 2833 -3 - 285 PTS system, galactitol-specific IIB component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229929.peg.1695 CDS AZTP01000063.1 3585 3136 -3 - 450 PTS system, galactitol-specific IIA component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229929.peg.1696 CDS AZTP01000063.1 4195 3563 -1 - 633 Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144) D-Tagatose and Galactitol Utilization
fig|6666666.229929.peg.1697 CDS AZTP01000063.1 4854 4180 -3 - 675 Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144) D-Tagatose and Galactitol Utilization
fig|6666666.229929.peg.1698 CDS AZTP01000063.1 5821 4868 -1 - 954 Tagatose 1,6-bisphosphate aldolase (EC 4.1.2.40) - none -
fig|6666666.229929.peg.1699 CDS AZTP01000063.1 5912 6031 2 + 120 hypothetical protein - none -
fig|6666666.229929.peg.1700 CDS AZTP01000063.1 7057 6794 -1 - 264 LSU ribosomal protein L20p Ribosome LSU bacterial
fig|6666666.229929.peg.1701 CDS AZTP01000063.1 7479 7622 3 + 144 hypothetical protein - none -
fig|6666666.229929.peg.1702 CDS AZTP01000063.1 8102 7623 -2 - 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229929.peg.1703 CDS AZTP01000063.1 8478 9257 3 + 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229929.peg.1704 CDS AZTP01000063.1 11328 9397 -3 - 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229929.peg.1705 CDS AZTP01000063.1 11568 12443 3 + 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229929.peg.1706 CDS AZTP01000063.1 13333 12509 -1 - 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229929.peg.1707 CDS AZTP01000063.1 14582 13524 -2 - 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229929.peg.1708 CDS AZTP01000063.1 14774 15364 2 + 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229929.peg.1709 CDS AZTP01000063.1 16793 15456 -2 - 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229929.peg.1710 CDS AZTP01000063.1 18568 16979 -1 - 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229929.peg.1711 CDS AZTP01000063.1 19686 18838 -3 - 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229929.peg.1712 CDS AZTP01000063.1 19763 21481 2 + 1719 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229929.peg.1713 CDS AZTP01000063.1 21491 21850 2 + 360 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229929.peg.1714 CDS AZTP01000063.1 21862 22446 1 + 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229929.peg.1715 CDS AZTP01000063.1 22511 23098 2 + 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229929.peg.1716 CDS AZTP01000063.1 23925 23233 -3 - 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229929.peg.1717 CDS AZTP01000063.1 24142 25212 1 + 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229929.peg.1718 CDS AZTP01000063.1 25216 25857 1 + 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229929.peg.1719 CDS AZTP01000063.1 25873 26355 1 + 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229929.peg.1720 CDS AZTP01000063.1 27585 27704 3 + 120 hypothetical protein - none -
fig|6666666.229929.peg.1721 CDS AZTP01000063.1 28005 27754 -3 - 252 FIG00699498: hypothetical protein - none -
fig|6666666.229929.peg.1722 CDS AZTP01000063.1 29200 30186 1 + 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229929.peg.1723 CDS AZTP01000063.1 30883 30170 -1 - 714 SanA protein - none -
fig|6666666.229929.peg.1724 CDS AZTP01000063.1 31064 32179 2 + 1116 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229929.peg.1725 CDS AZTP01000063.1 32483 33481 2 + 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229929.peg.1726 CDS AZTP01000063.1 33591 33773 3 + 183 hypothetical protein - none -
fig|6666666.229929.peg.1727 CDS AZTP01000063.1 33775 33909 1 + 135 putative cytoplasmic protein - none -
fig|6666666.229929.peg.1728 CDS AZTP01000063.1 33896 34072 2 + 177 putative cytoplasmic protein - none -
fig|6666666.229929.peg.1729 CDS AZTP01000063.1 35013 34186 -3 - 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229929.peg.1730 CDS AZTP01000063.1 36068 35097 -2 - 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229929.peg.1731 CDS AZTP01000063.1 37067 36099 -2 - 969 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229929.peg.1732 CDS AZTP01000063.1 37745 37122 -2 - 624 Hypothetical YciO protein, TsaC/YrdC paralog YrdC-YciO-Sua5 protein family
fig|6666666.229929.peg.1733 CDS AZTP01000063.1 38946 37822 -3 - 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229929.peg.1734 CDS AZTP01000063.1 40872 38989 -3 - 1884 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229929.peg.1735 CDS AZTP01000063.1 40996 41550 1 + 555 FIG002003: Protein YdjA - none -
fig|6666666.229929.peg.1736 CDS AZTP01000063.1 43383 41902 -3 - 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229929.peg.1737 CDS AZTP01000063.1 45009 43420 -3 - 1590 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229929.peg.1738 CDS AZTP01000063.1 47755 45098 -1 - 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229929.peg.1739 CDS AZTP01000063.1 48149 49009 2 + 861 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229929.peg.1740 CDS AZTP01000063.1 51883 49169 -1 - 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229929.peg.1741 CDS AZTP01000063.1 52056 54446 3 + 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229929.peg.1742 CDS AZTP01000063.1 54592 56667 1 + 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229929.peg.1743 CDS AZTP01000063.1 56744 56625 -2 - 120 hypothetical protein - none -
fig|6666666.229929.peg.1744 CDS AZTP01000063.1 57359 56817 -2 - 543 Colicin V production protein - none -
fig|6666666.229929.peg.1745 CDS AZTP01000063.1 57982 57539 -1 - 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229929.peg.1746 CDS AZTP01000063.1 58249 59451 1 + 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229929.peg.1747 CDS AZTP01000063.1 59519 61654 2 + 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229929.peg.1748 CDS AZTP01000063.1 61785 61904 3 + 120 hypothetical protein - none -
fig|6666666.229929.peg.1749 CDS AZTP01000063.1 62000 62362 2 + 363 hypothetical protein - none -
fig|6666666.229929.peg.1750 CDS AZTP01000063.1 62924 62424 -2 - 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229929.peg.1751 CDS AZTP01000063.1 64383 62917 -3 - 1467 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229929.peg.1752 CDS AZTP01000063.1 64937 64500 -2 - 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229929.peg.1753 CDS AZTP01000063.1 65235 67664 3 + 2430 DNA internalization-related competence protein ComEC/Rec2 KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229929.peg.1754 CDS AZTP01000063.1 67711 69459 1 + 1749 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229929.peg.1755 CDS AZTP01000063.1 69485 70459 2 + 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229929.peg.1756 CDS AZTP01000063.1 70481 70660 2 + 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229929.peg.1757 CDS AZTP01000063.1 70662 71435 3 + 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229929.peg.1758 CDS AZTP01000063.1 71957 73786 2 + 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229929.peg.1759 CDS AZTP01000063.1 73788 73949 3 + 162 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229929.peg.1760 CDS AZTP01000063.1 75090 73999 -3 - 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229929.peg.1761 CDS AZTP01000063.1 75961 75110 -1 - 852 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229929.peg.1762 CDS AZTP01000063.1 76827 75958 -3 - 870 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229929.peg.1763 CDS AZTP01000063.1 77894 76824 -2 - 1071 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229929.peg.1764 CDS AZTP01000063.1 77993 78118 2 + 126 hypothetical protein - none -
fig|6666666.229929.peg.1765 CDS AZTP01000063.1 79208 78129 -2 - 1080 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229929.peg.1766 CDS AZTP01000063.1 80596 79742 -1 - 855 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229929.peg.1767 CDS AZTP01000063.1 81064 81225 1 + 162 hypothetical protein - none -
fig|6666666.229929.peg.1768 CDS AZTP01000063.1 81357 81196 -3 - 162 hypothetical protein - none -
fig|6666666.229929.peg.1769 CDS AZTP01000063.1 83044 81620 -1 - 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229929.peg.1770 CDS AZTP01000063.1 84590 83055 -2 - 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229929.peg.1771 CDS AZTP01000063.1 84839 85618 2 + 780 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229929.peg.1772 CDS AZTP01000063.1 85866 87053 3 + 1188 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229929.peg.1773 CDS AZTP01000063.1 87805 88026 1 + 222 Fructokinase (EC 2.7.1.4) Fructose utilization;
Mannitol Utilization
fig|6666666.229929.peg.1774 CDS AZTP01000063.1 88011 88157 3 + 147 Fructokinase (EC 2.7.1.4) Fructose utilization;
Mannitol Utilization
fig|6666666.229929.peg.1775 CDS AZTP01000063.1 88199 88414 2 + 216 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.229929.peg.1776 CDS AZTP01000063.1 88404 88622 3 + 219 Sucrose-6-phosphate hydrolase (EC 3.2.1.B3) - none -
fig|6666666.229929.peg.1777 CDS AZTP01000063.1 89630 88713 -2 - 918 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229929.peg.1778 CDS AZTP01000063.1 90016 89630 -1 - 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229929.peg.1779 CDS AZTP01000063.1 92681 90549 -2 - 2133 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229929.peg.1780 CDS AZTP01000064.1 1708 212 -1 - 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229929.peg.1781 CDS AZTP01000064.1 2187 1732 -3 - 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229929.peg.1782 CDS AZTP01000064.1 2613 3965 3 + 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229929.peg.1783 CDS AZTP01000064.1 3995 4180 2 + 186 hypothetical protein - none -
fig|6666666.229929.peg.1784 CDS AZTP01000064.1 4220 4492 2 + 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.1785 CDS AZTP01000064.1 4504 4770 1 + 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.1786 CDS AZTP01000064.1 4802 6361 2 + 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229929.peg.1787 CDS AZTP01000064.1 7704 6754 -3 - 951 hypothetical protein - none -
fig|6666666.229929.peg.1788 CDS AZTP01000064.1 9486 10439 3 + 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229929.peg.1789 CDS AZTP01000064.1 10502 11359 2 + 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229929.peg.1790 CDS AZTP01000064.1 11391 12737 3 + 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229929.peg.1791 CDS AZTP01000064.1 13959 12844 -3 - 1116 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229929.peg.1792 CDS AZTP01000064.1 14475 14089 -3 - 387 Integral membrane protein - none -
fig|6666666.229929.peg.1793 CDS AZTP01000064.1 14670 15686 3 + 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229929.peg.1794 CDS AZTP01000064.1 15692 16033 2 + 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229929.peg.1795 CDS AZTP01000064.1 16040 17335 2 + 1296 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229929.peg.1796 CDS AZTP01000064.1 17332 17457 1 + 126 hypothetical protein - none -
fig|6666666.229929.peg.1797 CDS AZTP01000064.1 17468 18112 2 + 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229929.peg.1798 CDS AZTP01000064.1 19958 18735 -2 - 1224 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229929.peg.1799 CDS AZTP01000064.1 21324 20020 -3 - 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229929.peg.1800 CDS AZTP01000064.1 22216 21515 -1 - 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229929.peg.1801 CDS AZTP01000064.1 22237 22935 1 + 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229929.peg.1802 CDS AZTP01000064.1 24489 22996 -3 - 1494 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229929.peg.1803 CDS AZTP01000064.1 25019 24681 -2 - 339 FIG00904093: hypothetical protein - none -
fig|6666666.229929.peg.1804 CDS AZTP01000064.1 25195 26400 1 + 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229929.peg.1805 CDS AZTP01000064.1 26491 28254 1 + 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229929.peg.1806 CDS AZTP01000064.1 28426 28836 1 + 411 probable membrane protein YPO3565 - none -
fig|6666666.229929.peg.1807 CDS AZTP01000064.1 29034 30416 3 + 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229929.peg.1808 CDS AZTP01000064.1 31687 30617 -1 - 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229929.peg.1809 CDS AZTP01000064.1 33956 31914 -2 - 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229929.peg.1810 CDS AZTP01000064.1 35601 34567 -3 - 1035 putative membrane protein - none -
fig|6666666.229929.peg.1811 CDS AZTP01000064.1 36282 35617 -3 - 666 putative exported protein - none -
fig|6666666.229929.peg.1812 CDS AZTP01000064.1 36685 38331 1 + 1647 ABC transporter ATP-binding protein - none -
fig|6666666.229929.peg.1813 CDS AZTP01000064.1 39321 38434 -3 - 888 putative adhesin/invasin - none -
fig|6666666.229929.peg.1814 CDS AZTP01000065.1 218 2473 2 + 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229929.peg.1815 CDS AZTP01000065.1 2752 3363 1 + 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229929.peg.1816 CDS AZTP01000065.1 4126 3413 -1 - 714 hypothetical protein - none -
fig|6666666.229929.peg.1817 CDS AZTP01000065.1 4806 4129 -3 - 678 FIG00904286: hypothetical protein - none -
fig|6666666.229929.peg.1818 CDS AZTP01000065.1 4947 5300 3 + 354 Putative translation initiation inhibitor, yjgF family - none -
fig|6666666.229929.peg.1819 CDS AZTP01000065.1 6213 5341 -3 - 873 hypothetical protein - none -
fig|6666666.229929.peg.1820 CDS AZTP01000066.1 1176 34 -3 - 1143 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229929.peg.1821 CDS AZTP01000067.1 1036 455 -1 - 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229929.peg.1822 CDS AZTP01000067.1 2045 1116 -2 - 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) CBSS-316407.3.peg.1371;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.1823 CDS AZTP01000067.1 2677 2045 -1 - 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.1824 CDS AZTP01000067.1 3296 2688 -2 - 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) CBSS-316407.3.peg.1371;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229929.peg.1825 CDS AZTP01000067.1 5175 3307 -3 - 1869 Putative transport protein - none -
fig|6666666.229929.peg.1826 CDS AZTP01000067.1 5814 5215 -3 - 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229929.peg.1827 CDS AZTP01000067.1 6991 5807 -1 - 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229929.peg.1828 CDS AZTP01000067.1 6973 7098 1 + 126 hypothetical protein - none -
fig|6666666.229929.peg.1829 CDS AZTP01000067.1 7863 7075 -3 - 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229929.peg.1830 CDS AZTP01000067.1 8294 7884 -2 - 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229929.peg.1831 CDS AZTP01000067.1 9453 8431 -3 - 1023 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229929.peg.1832 CDS AZTP01000067.1 9788 9453 -2 - 336 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229929.peg.1833 CDS AZTP01000068.1 19 180 1 + 162 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229929.peg.1834 CDS AZTP01000068.1 554 673 2 + 120 Mobile element protein - none -
fig|6666666.229929.peg.1835 CDS AZTP01000068.1 757 1017 1 + 261 Mobile element protein - none -
fig|6666666.229929.peg.1836 CDS AZTP01000068.1 2114 2971 2 + 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines
fig|6666666.229929.peg.1837 CDS AZTP01000068.1 4704 3061 -3 - 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229929.peg.1838 CDS AZTP01000068.1 5115 4825 -3 - 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229929.peg.1839 CDS AZTP01000069.1 684 2102 3 + 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229929.peg.1840 CDS AZTP01000069.1 2285 3334 2 + 1050 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229929.peg.1841 CDS AZTP01000069.1 3703 3584 -1 - 120 Integral membrane protein - none -
fig|6666666.229929.peg.1842 CDS AZTP01000069.1 4861 4238 -1 - 624 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229929.peg.1843 CDS AZTP01000069.1 5270 4914 -2 - 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229929.peg.1844 CDS AZTP01000069.1 7531 5300 -1 - 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229929.peg.1845 CDS AZTP01000069.1 8857 7541 -1 - 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229929.peg.1846 CDS AZTP01000069.1 9545 8859 -2 - 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229929.peg.1847 CDS AZTP01000069.1 11010 10162 -3 - 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229929.peg.1848 CDS AZTP01000069.1 11889 11167 -3 - 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229929.peg.1849 CDS AZTP01000069.1 12301 12041 -1 - 261 hypothetical protein - none -
fig|6666666.229929.peg.1850 CDS AZTP01000069.1 13182 12298 -3 - 885 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229929.peg.1851 CDS AZTP01000069.1 14073 13210 -3 - 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229929.peg.1852 CDS AZTP01000069.1 14191 14907 1 + 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229929.peg.1853 CDS AZTP01000069.1 14917 15561 1 + 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229929.peg.1854 CDS AZTP01000069.1 15643 16518 1 + 876 DnaJ-like protein DjlA - none -
fig|6666666.229929.peg.1855 CDS AZTP01000069.1 16522 17526 1 + 1005 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229929.peg.1856 CDS AZTP01000069.1 18570 17512 -3 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229929.peg.1857 CDS AZTP01000069.1 20106 18586 -3 - 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229929.peg.1858 CDS AZTP01000069.1 21195 20197 -3 - 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229929.peg.1859 CDS AZTP01000069.1 21756 21415 -3 - 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229929.peg.1860 CDS AZTP01000069.1 22555 21788 -1 - 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229929.peg.1861 CDS AZTP01000069.1 22720 23910 1 + 1191 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229929.peg.1862 CDS AZTP01000069.1 23888 24166 2 + 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229929.peg.1863 CDS AZTP01000069.1 24169 25248 1 + 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229929.peg.1864 CDS AZTP01000069.1 25643 25768 2 + 126 hypothetical protein - none -
fig|6666666.229929.peg.1865 CDS AZTP01000069.1 26342 25749 -2 - 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229929.peg.1866 CDS AZTP01000069.1 26446 26757 1 + 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229929.peg.1867 CDS AZTP01000069.1 26767 26883 1 + 117 hypothetical protein - none -
fig|6666666.229929.peg.1868 CDS AZTP01000069.1 26921 27088 2 + 168 hypothetical protein - none -
fig|6666666.229929.peg.1869 CDS AZTP01000069.1 27113 28453 2 + 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.1870 CDS AZTP01000069.1 28456 29691 1 + 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.1871 CDS AZTP01000069.1 29684 30469 2 + 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.1872 CDS AZTP01000069.1 30469 31098 1 + 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.1873 CDS AZTP01000069.1 31102 31698 1 + 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.1874 CDS AZTP01000069.1 31710 32945 3 + 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.1875 CDS AZTP01000069.1 32950 33099 1 + 150 hypothetical protein - none -
fig|6666666.229929.peg.1876 CDS AZTP01000069.1 33096 34184 3 + 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229929.peg.1877 CDS AZTP01000069.1 34263 34520 3 + 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.1878 CDS AZTP01000069.1 34781 35932 2 + 1152 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229929.peg.1879 CDS AZTP01000069.1 36160 36339 1 + 180 hypothetical protein - none -
fig|6666666.229929.peg.1880 CDS AZTP01000069.1 36470 36336 -2 - 135 hypothetical protein - none -
fig|6666666.229929.peg.1881 CDS AZTP01000069.1 36577 37887 1 + 1311 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229929.peg.1882 CDS AZTP01000069.1 38402 37983 -2 - 420 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.229929.peg.1883 CDS AZTP01000069.1 38959 38402 -1 - 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229929.peg.1884 CDS AZTP01000069.1 39711 38977 -3 - 735 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229929.peg.1885 CDS AZTP01000069.1 40006 39785 -1 - 222 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229929.peg.1886 CDS AZTP01000070.1 1018 131 -1 - 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229929.peg.1887 CDS AZTP01000070.1 2458 1094 -1 - 1365 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229929.peg.1888 CDS AZTP01000070.1 2672 2490 -2 - 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229929.peg.1889 CDS AZTP01000070.1 5419 2795 -1 - 2625 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229929.peg.1890 CDS AZTP01000070.1 6044 5619 -2 - 426 Universal stress protein A Universal stress protein family
fig|6666666.229929.peg.1891 CDS AZTP01000070.1 6226 7020 1 + 795 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229929.peg.1892 CDS AZTP01000070.1 8106 7117 -3 - 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229929.peg.1893 CDS AZTP01000070.1 10104 8365 -3 - 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229929.peg.1894 CDS AZTP01000070.1 10333 10109 -1 - 225 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229929.peg.1895 CDS AZTP01000070.1 10562 11485 2 + 924 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229929.peg.1896 CDS AZTP01000070.1 11551 11964 1 + 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229929.peg.1897 CDS AZTP01000070.1 12004 12699 1 + 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229929.peg.1898 CDS AZTP01000070.1 12744 14132 3 + 1389 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229929.peg.1899 CDS AZTP01000070.1 15398 14190 -2 - 1209 Sodium/glutamate symport protein - none -
fig|6666666.229929.peg.1900 CDS AZTP01000070.1 15998 15564 -2 - 435 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229929.peg.1901 CDS AZTP01000070.1 16825 15995 -1 - 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229929.peg.1902 CDS AZTP01000070.1 17298 16822 -3 - 477 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229929.peg.1903 CDS AZTP01000070.1 17963 17301 -2 - 663 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229929.peg.1904 CDS AZTP01000070.1 18095 19591 2 + 1497 ATPase component BioM of energizing module of biotin ECF transporter ECF class transporters
fig|6666666.229929.peg.1905 CDS AZTP01000070.1 19675 20034 1 + 360 Mobile element protein - none -
fig|6666666.229929.peg.1906 CDS AZTP01000070.1 20055 20852 3 + 798 Mobile element protein - none -
fig|6666666.229929.peg.1907 CDS AZTP01000070.1 21085 21900 1 + 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229929.peg.1908 CDS AZTP01000070.1 22883 21990 -2 - 894 Transcriptional regulator, LysR family - none -
fig|6666666.229929.peg.1909 CDS AZTP01000070.1 23183 24028 2 + 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229929.peg.1910 CDS AZTP01000070.1 24235 24561 1 + 327 FIG022160: hypothetical toxin - none -
fig|6666666.229929.peg.1911 CDS AZTP01000070.1 24554 24838 2 + 285 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229929.peg.1912 CDS AZTP01000070.1 25200 25622 3 + 423 Aldo-keto reductase - none -
fig|6666666.229929.peg.1913 CDS AZTP01000070.1 25661 26335 2 + 675 Aldo-keto reductase - none -
fig|6666666.229929.peg.1914 CDS AZTP01000070.1 26388 27368 3 + 981 Aldo-keto reductase - none -
fig|6666666.229929.peg.1915 CDS AZTP01000070.1 27581 29239 2 + 1659 Carboxylesterase type B - none -
fig|6666666.229929.peg.1916 CDS AZTP01000070.1 29570 30133 2 + 564 Putative exported protein precursor - none -
fig|6666666.229929.peg.1917 CDS AZTP01000070.1 30157 30669 1 + 513 Putative exported protein precursor - none -
fig|6666666.229929.peg.1918 CDS AZTP01000070.1 31700 30810 -2 - 891 Transcriptional regulator, LysR family - none -
fig|6666666.229929.peg.1919 CDS AZTP01000070.1 31804 32868 1 + 1065 FIG01220323: hypothetical protein - none -
fig|6666666.229929.peg.1920 CDS AZTP01000070.1 34854 33022 -3 - 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229929.peg.1921 CDS AZTP01000070.1 35685 34909 -3 - 777 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229929.peg.1922 CDS AZTP01000070.1 36104 35832 -2 - 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229929.peg.1923 CDS AZTP01000070.1 36864 36271 -3 - 594 FIG01200173: hypothetical protein - none -
fig|6666666.229929.peg.1924 CDS AZTP01000070.1 37943 36879 -2 - 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229929.peg.1925 CDS AZTP01000070.1 38741 37956 -2 - 786 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229929.peg.1926 CDS AZTP01000070.1 39523 38879 -1 - 645 converved hypothetical protein - none -
fig|6666666.229929.peg.1927 CDS AZTP01000070.1 39783 41399 3 + 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229929.peg.1928 CDS AZTP01000070.1 41660 41463 -2 - 198 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229929.peg.1929 CDS AZTP01000072.1 220 339 1 + 120 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.1930 CDS AZTP01000072.1 350 1429 2 + 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.1931 CDS AZTP01000072.1 1439 2050 2 + 612 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.1932 CDS AZTP01000072.1 2047 2835 1 + 789 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229929.peg.1933 CDS AZTP01000072.1 2982 3617 3 + 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229929.peg.1934 CDS AZTP01000072.1 3642 5015 3 + 1374 sodium-dependent transporter - none -
fig|6666666.229929.peg.1935 CDS AZTP01000072.1 6182 5397 -2 - 786 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229929.peg.1936 CDS AZTP01000072.1 6917 6195 -2 - 723 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229929.peg.1937 CDS AZTP01000073.1 2365 833 -1 - 1533 Na+/H+ antiporter - none -
fig|6666666.229929.peg.1938 CDS AZTP01000073.1 2806 3204 1 + 399 DNA-binding protein H-NS - none -
fig|6666666.229929.peg.1939 CDS AZTP01000073.1 3239 4108 2 + 870 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229929.peg.1940 CDS AZTP01000073.1 4243 4872 1 + 630 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) RNA methylation
fig|6666666.229929.peg.1941 CDS AZTP01000073.1 4979 6931 2 + 1953 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229929.peg.1942 CDS AZTP01000073.1 7031 7567 2 + 537 Putative transporting ATPase - none -
fig|6666666.229929.peg.1943 CDS AZTP01000073.1 8753 7695 -2 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229929.peg.1944 CDS AZTP01000073.1 10469 8775 -2 - 1695 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229929.peg.1945 CDS AZTP01000073.1 11551 10472 -1 - 1080 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229929.peg.1946 CDS AZTP01000073.1 12571 11573 -1 - 999 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229929.peg.1947 CDS AZTP01000073.1 12945 14195 3 + 1251 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229929.peg.1948 CDS AZTP01000073.1 14192 16174 2 + 1983 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229929.peg.1949 CDS AZTP01000073.1 16167 17417 3 + 1251 Phosphoglycerate transport system transcriptional regulatory protein PgtA Phosphoglycerate transport system
fig|6666666.229929.peg.1950 CDS AZTP01000073.1 18308 17469 -2 - 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229929.peg.1951 CDS AZTP01000073.1 19099 18317 -1 - 783 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229929.peg.1952 CDS AZTP01000073.1 19208 19522 2 + 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229929.peg.1953 CDS AZTP01000073.1 19519 20232 1 + 714 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229929.peg.1954 CDS AZTP01000073.1 20285 20449 2 + 165 hypothetical protein - none -
fig|6666666.229929.peg.1955 CDS AZTP01000073.1 20639 20848 2 + 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229929.peg.1956 CDS AZTP01000073.1 21361 20915 -1 - 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229929.peg.1957 CDS AZTP01000073.1 21508 23292 1 + 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229929.peg.1958 CDS AZTP01000073.1 23435 23965 2 + 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229929.peg.1959 CDS AZTP01000073.1 24399 24755 3 + 357 DsrE-related protein - none -
fig|6666666.229929.peg.1960 CDS AZTP01000073.1 24825 28493 3 + 3669 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229929.peg.1961 CDS AZTP01000073.1 28493 30472 2 + 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229929.peg.1962 CDS AZTP01000073.1 30485 31081 2 + 597 hypothetical protein - none -
fig|6666666.229929.peg.1963 CDS AZTP01000073.1 31323 31751 3 + 429 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.229929.peg.1964 CDS AZTP01000073.1 31768 32160 1 + 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229929.peg.1965 CDS AZTP01000073.1 32310 33095 3 + 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229929.peg.1966 CDS AZTP01000073.1 33400 33116 -1 - 285 StbE replicon stabilization toxin - none -
fig|6666666.229929.peg.1967 CDS AZTP01000073.1 33651 33397 -3 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.1968 CDS AZTP01000073.1 35243 33786 -2 - 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229929.peg.1969 CDS AZTP01000073.1 35467 35297 -1 - 171 hypothetical protein - none -
fig|6666666.229929.peg.1970 CDS AZTP01000073.1 35469 36248 3 + 780 Protein of unknown function DUF419 - none -
fig|6666666.229929.peg.1971 CDS AZTP01000073.1 36556 36380 -1 - 177 hypothetical protein - none -
fig|6666666.229929.peg.1972 CDS AZTP01000073.1 39038 36549 -2 - 2490 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229929.peg.1973 CDS AZTP01000073.1 40199 39099 -2 - 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229929.peg.1974 CDS AZTP01000073.1 40505 41962 2 + 1458 Thiamine biosynthesis protein thiI - none -
fig|6666666.229929.peg.1975 CDS AZTP01000073.1 42179 42051 -2 - 129 hypothetical protein - none -
fig|6666666.229929.peg.1976 CDS AZTP01000073.1 42254 43246 2 + 993 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229929.peg.1977 CDS AZTP01000074.1 664 804 1 + 141 hypothetical protein - none -
fig|6666666.229929.peg.1978 CDS AZTP01000075.1 944 1879 2 + 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) KDO2-Lipid A biosynthesis
fig|6666666.229929.peg.1979 CDS AZTP01000075.1 1879 2433 1 + 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) KDO2-Lipid A biosynthesis
fig|6666666.229929.peg.1980 CDS AZTP01000075.1 2475 2597 3 + 123 hypothetical protein - none -
fig|6666666.229929.peg.1981 CDS AZTP01000076.1 140 727 2 + 588 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229929.peg.1982 CDS AZTP01000076.1 844 1236 1 + 393 putative - none -
fig|6666666.229929.peg.1983 CDS AZTP01000076.1 1248 2246 3 + 999 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229929.peg.1984 CDS AZTP01000076.1 2342 2620 2 + 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.1985 CDS AZTP01000076.1 2630 2908 2 + 279 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229929.peg.1986 CDS AZTP01000076.1 2917 4347 1 + 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229929.peg.1987 CDS AZTP01000076.1 4637 5785 2 + 1149 Uptake hydrogenase small subunit precursor (EC 1.12.99.6) Hydrogenases
fig|6666666.229929.peg.1988 CDS AZTP01000076.1 5787 6827 3 + 1041 Fe-S-cluster-containing hydrogenase components 1 Anaerobic respiratory reductases;
Hydrogenases
fig|6666666.229929.peg.1989 CDS AZTP01000076.1 6820 7860 1 + 1041 Ni/Fe-hydrogenase 2 B-type cytochrome subunit Hydrogenases
fig|6666666.229929.peg.1990 CDS AZTP01000076.1 7835 8047 2 + 213 Ni/Fe-hydrogenase 2 B-type cytochrome subunit Hydrogenases
fig|6666666.229929.peg.1991 CDS AZTP01000076.1 8047 9756 1 + 1710 Uptake hydrogenase large subunit (EC 1.12.99.6) Hydrogenases
fig|6666666.229929.peg.1992 CDS AZTP01000076.1 9756 10235 3 + 480 Hydrogenase maturation protease (EC 3.4.24.-) - none -
fig|6666666.229929.peg.1993 CDS AZTP01000076.1 10438 10947 1 + 510 Hydrogenase-2 operon protein hybE - none -
fig|6666666.229929.peg.1994 CDS AZTP01000076.1 10977 11252 3 + 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229929.peg.1995 CDS AZTP01000076.1 11916 11725 -3 - 192 hypothetical protein - none -
fig|6666666.229929.peg.1996 CDS AZTP01000076.1 12124 12243 1 + 120 hypothetical protein - none -
fig|6666666.229929.peg.1997 CDS AZTP01000076.1 12277 12543 1 + 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229929.peg.1998 CDS AZTP01000076.1 12558 14354 3 + 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229929.peg.1999 CDS AZTP01000076.1 14365 15669 1 + 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229929.peg.2000 CDS AZTP01000076.1 17992 16361 -1 - 1632 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229929.peg.2001 CDS AZTP01000076.1 18729 18145 -3 - 585 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229929.peg.2002 CDS AZTP01000076.1 19109 18978 -2 - 132 hypothetical protein - none -
fig|6666666.229929.peg.2003 CDS AZTP01000076.1 19135 19803 1 + 669 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229929.peg.2004 CDS AZTP01000076.1 19813 21012 1 + 1200 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229929.peg.2005 CDS AZTP01000076.1 21009 21815 3 + 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229929.peg.2006 CDS AZTP01000076.1 22092 23777 3 + 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229929.peg.2007 CDS AZTP01000076.1 24019 25008 1 + 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229929.peg.2008 CDS AZTP01000076.1 25293 26699 3 + 1407 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229929.peg.2009 CDS AZTP01000076.1 27108 26806 -3 - 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229929.peg.2010 CDS AZTP01000076.1 28019 27141 -2 - 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229929.peg.2011 CDS AZTP01000076.1 29061 28045 -3 - 1017 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229929.peg.2012 CDS AZTP01000076.1 30090 29086 -3 - 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229929.peg.2013 CDS AZTP01000076.1 31135 30104 -1 - 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229929.peg.2014 CDS AZTP01000076.1 32662 31145 -1 - 1518 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229929.peg.2015 CDS AZTP01000076.1 32908 33873 1 + 966 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229929.peg.2016 CDS AZTP01000076.1 33922 35496 1 + 1575 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229929.peg.2017 CDS AZTP01000076.1 36310 35582 -1 - 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis Experimental
fig|6666666.229929.peg.2018 CDS AZTP01000076.1 37283 36387 -2 - 897 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229929.peg.2019 CDS AZTP01000077.1 1184 57 -2 - 1128 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229929.peg.2020 CDS AZTP01000077.1 1173 1304 3 + 132 hypothetical protein - none -
fig|6666666.229929.peg.2021 CDS AZTP01000077.1 2524 1298 -1 - 1227 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229929.peg.2022 CDS AZTP01000078.1 858 403 -3 - 456 Mobile element protein - none -
fig|6666666.229929.peg.2023 CDS AZTP01000079.1 1168 1293 1 + 126 hypothetical protein - none -
fig|6666666.229929.peg.2024 CDS AZTP01000079.1 1332 1967 3 + 636 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229929.peg.2025 CDS AZTP01000079.1 2881 2033 -1 - 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229929.peg.2026 CDS AZTP01000079.1 3380 3066 -2 - 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229929.peg.2027 CDS AZTP01000079.1 3604 3395 -1 - 210 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229929.peg.2028 CDS AZTP01000080.1 2413 710 -1 - 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229929.peg.2029 CDS AZTP01000080.1 2689 2973 1 + 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229929.peg.2030 CDS AZTP01000080.1 3009 5495 3 + 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229929.peg.2031 CDS AZTP01000080.1 5465 5602 2 + 138 hypothetical protein - none -
fig|6666666.229929.peg.2032 CDS AZTP01000080.1 5568 6383 3 + 816 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229929.peg.2033 CDS AZTP01000080.1 6383 7264 2 + 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229929.peg.2034 CDS AZTP01000080.1 7302 7751 3 + 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229929.peg.2035 CDS AZTP01000080.1 7765 8400 1 + 636 Cytochrome c-type protein NapC - none -
fig|6666666.229929.peg.2036 CDS AZTP01000080.1 10381 8486 -1 - 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229929.peg.2037 CDS AZTP01000080.1 11542 10499 -1 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229929.peg.2038 CDS AZTP01000080.1 12689 11562 -2 - 1128 Fic family protein - none -
fig|6666666.229929.peg.2039 CDS AZTP01000080.1 13786 12860 -1 - 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229929.peg.2040 CDS AZTP01000080.1 14066 14842 2 + 777 Protein HI0205 precursor - none -
fig|6666666.229929.peg.2041 CDS AZTP01000080.1 14869 16683 1 + 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229929.peg.2042 CDS AZTP01000080.1 17113 16790 -1 - 324 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229929.peg.2043 CDS AZTP01000080.1 17487 17170 -3 - 318 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229929.peg.2044 CDS AZTP01000080.1 20303 17502 -2 - 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229929.peg.2045 CDS AZTP01000080.1 20518 21081 1 + 564 Outer membrane protein 18/16 - none -
fig|6666666.229929.peg.2046 CDS AZTP01000080.1 21184 21414 1 + 231 FIG00696102: hypothetical protein - none -
fig|6666666.229929.peg.2047 CDS AZTP01000080.1 21424 23439 1 + 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229929.peg.2048 CDS AZTP01000080.1 24335 23955 -2 - 381 FIG00782409: hypothetical protein - none -
fig|6666666.229929.peg.2049 CDS AZTP01000080.1 24463 25065 1 + 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229929.peg.2050 CDS AZTP01000080.1 25065 25670 3 + 606 Galactoside O-acetyltransferase (EC 2.3.1.18) - none -
fig|6666666.229929.peg.2051 CDS AZTP01000080.1 25673 26158 2 + 486 Putative membrane protein - none -
fig|6666666.229929.peg.2052 CDS AZTP01000080.1 26371 26877 1 + 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229929.peg.2053 CDS AZTP01000080.1 27047 27199 2 + 153 hypothetical protein - none -
fig|6666666.229929.peg.2054 CDS AZTP01000080.1 27855 27196 -3 - 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229929.peg.2055 CDS AZTP01000080.1 28235 28924 2 + 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229929.peg.2056 CDS AZTP01000080.1 29704 29012 -1 - 693 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229929.peg.2057 CDS AZTP01000080.1 29816 29688 -2 - 129 hypothetical protein - none -
fig|6666666.229929.peg.2058 CDS AZTP01000080.1 29803 31134 1 + 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229929.peg.2059 CDS AZTP01000080.1 31160 31330 2 + 171 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229929.peg.2060 CDS AZTP01000080.1 31530 32831 3 + 1302 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229929.peg.2061 CDS AZTP01000080.1 34137 33505 -3 - 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229929.peg.2062 CDS AZTP01000080.1 34308 35633 3 + 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229929.peg.2063 CDS AZTP01000080.1 35644 35790 1 + 147 hypothetical protein - none -
fig|6666666.229929.peg.2064 CDS AZTP01000080.1 36046 35753 -1 - 294 AagD - none -
fig|6666666.229929.peg.2065 CDS AZTP01000080.1 37284 36049 -3 - 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229929.peg.2066 CDS AZTP01000080.1 39203 37293 -2 - 1911 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229929.peg.2067 CDS AZTP01000080.1 41606 39219 -2 - 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229929.peg.2068 CDS AZTP01000080.1 42628 41909 -1 - 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229929.peg.2069 CDS AZTP01000080.1 44006 42756 -2 - 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229929.peg.2070 CDS AZTP01000080.1 45471 44296 -3 - 1176 Cof protein - none -
fig|6666666.229929.peg.2071 CDS AZTP01000080.1 46690 45854 -1 - 837 PTS system, mannose-specific IID component - none -
fig|6666666.229929.peg.2072 CDS AZTP01000080.1 47501 46704 -2 - 798 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229929.peg.2073 CDS AZTP01000080.1 48496 47519 -1 - 978 PTS system, mannose-specific IIA component / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229929.peg.2074 CDS AZTP01000080.1 49382 48798 -2 - 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229929.peg.2075 CDS AZTP01000080.1 49398 50825 3 + 1428 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229929.peg.2076 CDS AZTP01000080.1 51007 52011 1 + 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229929.peg.2077 CDS AZTP01000080.1 52742 52098 -2 - 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229929.peg.2078 CDS AZTP01000080.1 52976 52770 -2 - 207 hypothetical protein - none -
fig|6666666.229929.peg.2079 CDS AZTP01000080.1 54195 53422 -3 - 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229929.peg.2080 CDS AZTP01000080.1 54799 54272 -1 - 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229929.peg.2081 CDS AZTP01000080.1 54962 56206 2 + 1245 Tryptophan-specific transport protein - none -
fig|6666666.229929.peg.2082 CDS AZTP01000080.1 56509 56742 1 + 234 hypothetical protein - none -
fig|6666666.229929.peg.2083 CDS AZTP01000080.1 57938 57231 -2 - 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229929.peg.2084 CDS AZTP01000080.1 58153 58680 1 + 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229929.peg.2085 CDS AZTP01000080.1 58701 60032 3 + 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229929.peg.2086 CDS AZTP01000080.1 60098 61681 2 + 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229929.peg.2087 CDS AZTP01000080.1 61747 62523 1 + 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229929.peg.2088 CDS AZTP01000080.1 62541 63035 3 + 495 Protein yfbU - none -
fig|6666666.229929.peg.2089 CDS AZTP01000080.1 63801 63118 -3 - 684 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229929.peg.2090 CDS AZTP01000080.1 63862 64002 1 + 141 hypothetical protein - none -
fig|6666666.229929.peg.2091 CDS AZTP01000080.1 64105 65763 1 + 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229929.peg.2092 CDS AZTP01000080.1 65971 67230 1 + 1260 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229929.peg.2093 CDS AZTP01000080.1 67227 68054 3 + 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229929.peg.2094 CDS AZTP01000080.1 68770 68066 -1 - 705 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein CBSS-203122.12.peg.188;
CBSS-203122.12.peg.188
fig|6666666.229929.peg.2095 CDS AZTP01000081.1 1231 425 -1 - 807 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229929.peg.2096 CDS AZTP01000081.1 1246 1362 1 + 117 hypothetical protein - none -
fig|6666666.229929.peg.2097 CDS AZTP01000081.1 1442 2101 2 + 660 putative membrane protein - none -
fig|6666666.229929.peg.2098 CDS AZTP01000081.1 2122 3384 1 + 1263 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.229929.peg.2099 CDS AZTP01000081.1 4578 3979 -3 - 600 hypothetical protein - none -
fig|6666666.229929.peg.2100 CDS AZTP01000081.1 5658 5461 -3 - 198 hypothetical protein - none -
fig|6666666.229929.peg.2101 CDS AZTP01000081.1 7483 7698 1 + 216 hypothetical protein - none -
fig|6666666.229929.peg.2102 CDS AZTP01000081.1 7702 8502 1 + 801 Cell filamentation protein fic - none -
fig|6666666.229929.peg.2103 CDS AZTP01000081.1 9406 8579 -1 - 828 Cell filamentation protein fic - none -
fig|6666666.229929.peg.2104 CDS AZTP01000081.1 9686 9408 -2 - 279 hypothetical protein - none -
fig|6666666.229929.peg.2105 CDS AZTP01000081.1 10107 9784 -3 - 324 hypothetical protein - none -
fig|6666666.229929.peg.2106 CDS AZTP01000081.1 10537 10097 -1 - 441 hypothetical protein - none -
fig|6666666.229929.peg.2107 CDS AZTP01000081.1 12623 10551 -2 - 2073 Coupling protein VirD4, ATPase required for T-DNA transfer - none -
fig|6666666.229929.peg.2108 CDS AZTP01000081.1 13627 14736 1 + 1110 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229929.peg.2109 CDS AZTP01000081.1 14742 15755 3 + 1014 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229929.peg.2110 CDS AZTP01000081.1 15963 16178 3 + 216 Thioredoxin - none -
fig|6666666.229929.peg.2111 CDS AZTP01000081.1 17323 16364 -1 - 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229929.peg.2112 CDS AZTP01000081.1 17796 20678 3 + 2883 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229929.peg.2113 CDS AZTP01000081.1 21506 21117 -2 - 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229929.peg.2114 CDS AZTP01000081.1 23436 21586 -3 - 1851 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229929.peg.2115 CDS AZTP01000081.1 23600 24169 2 + 570 Lysine decarboxylase family - none -
fig|6666666.229929.peg.2116 CDS AZTP01000081.1 24381 24647 3 + 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229929.peg.2117 CDS AZTP01000081.1 25052 25759 2 + 708 Aerobic respiration control protein arcA - none -
fig|6666666.229929.peg.2118 CDS AZTP01000081.1 26853 25855 -3 - 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229929.peg.2119 CDS AZTP01000081.1 27833 26850 -2 - 984 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229929.peg.2120 CDS AZTP01000081.1 28781 27843 -2 - 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229929.peg.2121 CDS AZTP01000081.1 29711 28791 -2 - 921 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229929.peg.2122 CDS AZTP01000081.1 29806 29693 -1 - 114 hypothetical protein - none -
fig|6666666.229929.peg.2123 CDS AZTP01000081.1 31439 29814 -2 - 1626 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229929.peg.2124 CDS AZTP01000081.1 31819 32301 1 + 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229929.peg.2125 CDS AZTP01000081.1 32253 32372 3 + 120 hypothetical protein - none -
fig|6666666.229929.peg.2126 CDS AZTP01000081.1 33544 32369 -1 - 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229929.peg.2127 CDS AZTP01000081.1 34498 33581 -1 - 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229929.peg.2128 CDS AZTP01000081.1 35510 34566 -2 - 945 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229929.peg.2129 CDS AZTP01000081.1 35839 35582 -1 - 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229929.peg.2130 CDS AZTP01000081.1 36171 35860 -3 - 312 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229929.peg.2131 CDS AZTP01000081.1 36438 37409 3 + 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229929.peg.2132 CDS AZTP01000081.1 38256 38984 3 + 729 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229929.peg.2133 CDS AZTP01000081.1 39526 40911 1 + 1386 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229929.peg.2134 CDS AZTP01000081.1 41537 40968 -2 - 570 Primosomal replication protein N@1@1 - none -
fig|6666666.229929.peg.2135 CDS AZTP01000081.1 42959 41607 -2 - 1353 Histidine permease YuiF - none -
fig|6666666.229929.peg.2136 CDS AZTP01000081.1 44053 43400 -1 - 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229929.peg.2137 CDS AZTP01000081.1 44542 44135 -1 - 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229929.peg.2138 CDS AZTP01000081.1 46649 44697 -2 - 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229929.peg.2139 CDS AZTP01000081.1 47051 48382 2 + 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229929.peg.2140 CDS AZTP01000082.1 101 2467 2 + 2367 FIG00362583: hypothetical protein - none -
fig|6666666.229929.peg.2141 CDS AZTP01000082.1 3271 2546 -1 - 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229929.peg.2142 CDS AZTP01000082.1 3861 3334 -3 - 528 membrane protein, putative - none -
fig|6666666.229929.peg.2143 CDS AZTP01000082.1 4070 5848 2 + 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229929.peg.2144 CDS AZTP01000083.1 858 463 -3 - 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229929.peg.2145 CDS AZTP01000083.1 2344 968 -1 - 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229929.peg.2146 CDS AZTP01000083.1 3723 2368 -3 - 1356 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.229929.peg.2147 CDS AZTP01000083.1 4427 3723 -2 - 705 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229929.peg.2148 CDS AZTP01000086.1 1145 102 -2 - 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229929.peg.2149 CDS AZTP01000086.1 1387 2400 1 + 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229929.peg.2150 CDS AZTP01000086.1 2614 3606 1 + 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229929.peg.2151 CDS AZTP01000086.1 3681 5219 3 + 1539 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229929.peg.2152 CDS AZTP01000086.1 5238 6248 3 + 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229929.peg.2153 CDS AZTP01000086.1 8169 6322 -3 - 1848 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229929.peg.2154 CDS AZTP01000086.1 8195 8329 2 + 135 hypothetical protein - none -
fig|6666666.229929.peg.2155 CDS AZTP01000086.1 9530 8310 -2 - 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229929.peg.2156 CDS AZTP01000086.1 9700 11718 1 + 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229929.peg.2157 CDS AZTP01000086.1 11911 14988 1 + 3078 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229929.peg.2158 CDS AZTP01000087.1 333 473 3 + 141 hypothetical protein - none -
fig|6666666.229929.peg.2159 CDS AZTP01000087.1 518 1435 2 + 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229929.peg.2160 CDS AZTP01000087.1 1509 3188 3 + 1680 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229929.peg.2161 CDS AZTP01000087.1 3898 3251 -1 - 648 Outer membrane protein W precursor - none -
fig|6666666.229929.peg.2162 CDS AZTP01000087.1 4166 4924 2 + 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229929.peg.2163 CDS AZTP01000087.1 4930 5481 1 + 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229929.peg.2164 CDS AZTP01000087.1 5485 5955 1 + 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229929.peg.2165 CDS AZTP01000087.1 5958 6254 3 + 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229929.peg.2166 CDS AZTP01000088.1 88 378 1 + 291 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229929.peg.2167 CDS AZTP01000088.1 378 890 3 + 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis
fig|6666666.229929.peg.2168 CDS AZTP01000089.1 901 389 -1 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229929.rna.1 RNA AZTP01000001.1 19092 19164 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229929.rna.2 RNA AZTP01000001.1 19169 19252 2 + 84 tRNA-Leu-TAA - none -
fig|6666666.229929.rna.3 RNA AZTP01000001.1 19308 19380 3 + 73 tRNA-Lys-TTT - none -
fig|6666666.229929.rna.4 RNA AZTP01000001.1 48956 49028 2 + 73 tRNA-Lys-TTT - none -
fig|6666666.229929.rna.5 RNA AZTP01000002.1 21492 21578 3 + 87 tRNA-Ser-GGA tRNAs
fig|6666666.229929.rna.6 RNA AZTP01000002.1 43283 43211 -2 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.229929.rna.7 RNA AZTP01000002.1 43394 43321 -2 - 74 tRNA-Asp-GTC - none -
fig|6666666.229929.rna.8 RNA AZTP01000005.1 1607 51 -2 - 1557 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229929.rna.9 RNA AZTP01000007.1 40764 40682 -3 - 83 tRNA-Leu-CAA tRNAs
fig|6666666.229929.rna.10 RNA AZTP01000007.1 71424 71494 3 + 71 tRNA-Pseudo-AAC - none -
fig|6666666.229929.rna.11 RNA AZTP01000009.1 190 117 -1 - 74 tRNA-Pro-TGG - none -
fig|6666666.229929.rna.12 RNA AZTP01000009.1 268 196 -1 - 73 tRNA-His-GTG - none -
fig|6666666.229929.rna.13 RNA AZTP01000009.1 382 309 -1 - 74 tRNA-Arg-CCG tRNAs
fig|6666666.229929.rna.14 RNA AZTP01000012.1 114 1 -3 - 114 5S RNA - none -
fig|6666666.229929.rna.15 RNA AZTP01000012.1 3413 371 -2 - 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229929.rna.16 RNA AZTP01000013.1 2710 2637 -1 - 74 tRNA-Met-CAT - none -
fig|6666666.229929.rna.17 RNA AZTP01000016.1 8748 8665 -3 - 84 tRNA-Leu-CAG tRNAs
fig|6666666.229929.rna.18 RNA AZTP01000018.1 13113 13040 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.229929.rna.19 RNA AZTP01000018.1 13212 13139 -3 - 74 tRNA-Asp-GTC - none -
fig|6666666.229929.rna.20 RNA AZTP01000019.1 31016 30943 -2 - 74 tRNA-Lys-CTT - none -
fig|6666666.229929.rna.21 RNA AZTP01000019.1 31116 31044 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.229929.rna.22 RNA AZTP01000020.1 48107 48179 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229929.rna.23 RNA AZTP01000027.1 19073 19001 -2 - 73 tRNA-Val-TAC - none -
fig|6666666.229929.rna.24 RNA AZTP01000027.1 19176 19104 -3 - 73 tRNA-Val-TAC - none -
fig|6666666.229929.rna.25 RNA AZTP01000027.1 19290 19218 -3 - 73 tRNA-Val-TAC - none -
fig|6666666.229929.rna.26 RNA AZTP01000027.1 21100 21172 1 + 73 tRNA-Ala-GGC tRNAs
fig|6666666.229929.rna.27 RNA AZTP01000034.1 28530 28602 3 + 73 tRNA-Thr-TGT - none -
fig|6666666.229929.rna.28 RNA AZTP01000034.1 28636 28717 1 + 82 tRNA-Tyr-GTA - none -
fig|6666666.229929.rna.29 RNA AZTP01000034.1 28761 28832 3 + 72 tRNA-Gly-TCC - none -
fig|6666666.229929.rna.30 RNA AZTP01000034.1 28839 28911 3 + 73 tRNA-Thr-GGT - none -
fig|6666666.229929.rna.31 RNA AZTP01000039.1 335 262 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.229929.rna.32 RNA AZTP01000040.1 3157 3239 1 + 83 tRNA-Leu-GAG tRNAs
fig|6666666.229929.rna.33 RNA AZTP01000061.1 1093 1003 -1 - 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229929.rna.34 RNA AZTP01000064.1 2408 2335 -2 - 74 tRNA-Met-CAT - none -
fig|6666666.229929.rna.35 RNA AZTP01000064.1 18302 18231 -2 - 72 tRNA-Gln-TTG - none -
fig|6666666.229929.rna.36 RNA AZTP01000064.1 18416 18335 -2 - 82 tRNA-Leu-TAG - none -
fig|6666666.229929.rna.37 RNA AZTP01000064.1 18498 18425 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229929.rna.38 RNA AZTP01000064.1 34359 34431 3 + 73 tRNA-Asn-GTT - none -
fig|6666666.229929.rna.39 RNA AZTP01000068.1 1851 1778 -3 - 74 tRNA-Arg-TCT - none -
fig|6666666.229929.rna.40 RNA AZTP01000068.1 1961 1888 -2 - 74 tRNA-Pro-TGG - none -
fig|6666666.229929.rna.41 RNA AZTP01000069.1 25454 25526 2 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.229929.rna.42 RNA AZTP01000069.1 25534 25606 1 + 73 tRNA-Asn-GTT - none -
fig|6666666.229929.rna.43 RNA AZTP01000071.1 255 183 -3 - 73 tRNA-Ala-TGC - none -
fig|6666666.229929.rna.44 RNA AZTP01000071.1 381 308 -3 - 74 tRNA-Ile-GAT - none -
fig|6666666.229929.rna.45 RNA AZTP01000073.1 24154 24227 1 + 74 tRNA-Val-GAC tRNAs
fig|6666666.229929.rna.46 RNA AZTP01000080.1 23565 23655 3 + 91 tRNA-Ser-GCT - none -
fig|6666666.229929.rna.47 RNA AZTP01000080.1 23676 23749 3 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.229929.rna.48 RNA AZTP01000080.1 23807 23880 2 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.229929.rna.49 RNA AZTP01000081.1 13303 13233 -1 - 71 tRNA-Cys-GCA tRNAs
fig|6666666.229929.rna.50 RNA AZTP01000081.1 13387 13315 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229929.rna.51 RNA AZTP01000081.1 20771 20857 2 + 87 tRNA-Ser-TGA - none -
fig|6666666.229929.rna.52 RNA AZTP01000084.1 124 196 1 + 73 tRNA-Glu-TTC - none -