fig|6666666.229930.peg.1 CDS AEJP02000001.1 1264 782 -1 - 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229930.peg.2 CDS AEJP02000001.1 1920 1279 -3 - 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229930.peg.3 CDS AEJP02000001.1 2994 1924 -3 - 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229930.peg.4 CDS AEJP02000001.1 3210 3902 3 + 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229930.peg.5 CDS AEJP02000001.1 4595 4008 -2 - 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229930.peg.6 CDS AEJP02000001.1 5244 4660 -3 - 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229930.peg.7 CDS AEJP02000001.1 5625 5257 -3 - 369 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229930.peg.8 CDS AEJP02000001.1 7344 5626 -3 - 1719 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229930.peg.9 CDS AEJP02000001.1 7421 8269 2 + 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229930.peg.10 CDS AEJP02000001.1 8539 10128 1 + 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229930.peg.11 CDS AEJP02000001.1 10305 11642 3 + 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229930.peg.12 CDS AEJP02000001.1 12335 11745 -2 - 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229930.peg.13 CDS AEJP02000001.1 12528 13586 3 + 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229930.peg.14 CDS AEJP02000001.1 13776 14600 3 + 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229930.peg.15 CDS AEJP02000001.1 15534 14659 -3 - 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229930.peg.16 CDS AEJP02000001.1 15775 17706 1 + 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229930.peg.17 CDS AEJP02000001.1 17952 18563 3 + 612 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229930.peg.18 CDS AEJP02000001.1 18545 18709 2 + 165 hypothetical protein - none -
fig|6666666.229930.peg.19 CDS AEJP02000001.1 18684 18998 3 + 315 Type III restriction-modification system restriction subunit (EC 3.1.21.5) - none -
fig|6666666.229930.peg.20 CDS AEJP02000001.1 19100 18987 -2 - 114 hypothetical protein - none -
fig|6666666.229930.peg.21 CDS AEJP02000001.1 19894 19115 -1 - 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229930.peg.22 CDS AEJP02000001.1 20341 20748 1 + 408 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229930.peg.23 CDS AEJP02000001.1 20892 20749 -3 - 144 hypothetical protein - none -
fig|6666666.229930.peg.24 CDS AEJP02000001.1 21223 21576 1 + 354 LSU ribosomal protein L20p Ribosome LSU bacterial
fig|6666666.229930.peg.25 CDS AEJP02000001.1 22477 22358 -1 - 120 hypothetical protein - none -
fig|6666666.229930.peg.26 CDS AEJP02000001.1 22568 23518 2 + 951 Tagatose 1,6-bisphosphate aldolase (EC 4.1.2.40) - none -
fig|6666666.229930.peg.27 CDS AEJP02000001.1 23536 24828 1 + 1293 Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144) D-Tagatose and Galactitol Utilization
fig|6666666.229930.peg.28 CDS AEJP02000001.1 24806 25255 2 + 450 PTS system, galactitol-specific IIA component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229930.peg.29 CDS AEJP02000001.1 25274 25558 2 + 285 PTS system, galactitol-specific IIB component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229930.peg.30 CDS AEJP02000001.1 25564 26412 1 + 849 PTS system, galactitol-specific IIC component (EC 2.7.1.69) D-Tagatose and Galactitol Utilization
fig|6666666.229930.peg.31 CDS AEJP02000001.1 26483 27145 2 + 663 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) D-Tagatose and Galactitol Utilization
fig|6666666.229930.peg.32 CDS AEJP02000001.1 27213 27971 3 + 759 Galactitol utilization operon repressor D-Tagatose and Galactitol Utilization
fig|6666666.229930.peg.33 CDS AEJP02000001.1 29941 28091 -1 - 1851 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229930.peg.34 CDS AEJP02000001.1 30916 30026 -1 - 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229930.peg.35 CDS AEJP02000001.1 31172 30927 -2 - 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229930.peg.36 CDS AEJP02000001.1 31397 32293 2 + 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229930.peg.37 CDS AEJP02000001.1 32316 33662 3 + 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229930.peg.38 CDS AEJP02000001.1 34360 33719 -1 - 642 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229930.peg.39 CDS AEJP02000001.1 35879 34422 -2 - 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.40 CDS AEJP02000001.1 36801 35893 -3 - 909 Putative surface protein - none -
fig|6666666.229930.peg.41 CDS AEJP02000001.1 36920 37609 2 + 690 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229930.peg.42 CDS AEJP02000001.1 37654 38517 1 + 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229930.peg.43 CDS AEJP02000001.1 38600 38923 2 + 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229930.peg.44 CDS AEJP02000001.1 39891 38974 -3 - 918 hypothetical protein - none -
fig|6666666.229930.peg.45 CDS AEJP02000001.1 40670 39939 -2 - 732 hypothetical protein - none -
fig|6666666.229930.peg.46 CDS AEJP02000001.1 41226 41495 3 + 270 hypothetical protein - none -
fig|6666666.229930.peg.47 CDS AEJP02000001.1 42122 42370 2 + 249 Esterase/lipase - none -
fig|6666666.229930.peg.48 CDS AEJP02000001.1 42367 43485 1 + 1119 Esterase/lipase - none -
fig|6666666.229930.peg.49 CDS AEJP02000001.1 45132 43759 -3 - 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229930.peg.50 CDS AEJP02000001.1 47143 45209 -1 - 1935 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) Multidrug Resistance Efflux Pumps
fig|6666666.229930.peg.51 CDS AEJP02000001.1 48347 47163 -2 - 1185 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229930.peg.52 CDS AEJP02000001.1 48548 50239 2 + 1692 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229930.peg.53 CDS AEJP02000001.1 50311 50745 1 + 435 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229930.peg.54 CDS AEJP02000001.1 51202 51405 1 + 204 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229930.peg.55 CDS AEJP02000001.1 51402 53597 3 + 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229930.peg.56 CDS AEJP02000001.1 53594 55603 2 + 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229930.peg.57 CDS AEJP02000001.1 55630 56940 1 + 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229930.peg.58 CDS AEJP02000001.1 57142 58581 1 + 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229930.peg.59 CDS AEJP02000001.1 58704 61169 3 + 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229930.peg.60 CDS AEJP02000001.1 61334 61194 -2 - 141 hypothetical protein - none -
fig|6666666.229930.peg.61 CDS AEJP02000001.1 61893 61288 -3 - 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229930.peg.62 CDS AEJP02000001.1 62107 62394 1 + 288 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.229930.peg.63 CDS AEJP02000001.1 62542 63150 1 + 609 lipoprotein HlpB - none -
fig|6666666.229930.peg.64 CDS AEJP02000001.1 63298 64179 1 + 882 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229930.peg.65 CDS AEJP02000001.1 64347 65675 3 + 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229930.peg.66 CDS AEJP02000001.1 65703 65840 3 + 138 hypothetical protein - none -
fig|6666666.229930.peg.67 CDS AEJP02000001.1 65855 69316 2 + 3462 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229930.peg.68 CDS AEJP02000001.1 69337 70077 1 + 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229930.peg.69 CDS AEJP02000001.1 70077 74567 3 + 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229930.peg.70 CDS AEJP02000001.1 74643 75497 3 + 855 Integral membrane protein - none -
fig|6666666.229930.peg.71 CDS AEJP02000001.1 75526 76953 1 + 1428 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229930.peg.72 CDS AEJP02000002.1 1008 181 -3 - 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229930.peg.73 CDS AEJP02000002.1 1536 1039 -3 - 498 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229930.peg.74 CDS AEJP02000002.1 3610 1529 -1 - 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229930.peg.75 CDS AEJP02000002.1 5737 3611 -1 - 2127 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229930.peg.76 CDS AEJP02000002.1 6049 5783 -1 - 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229930.peg.77 CDS AEJP02000002.1 6745 6107 -1 - 639 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229930.peg.78 CDS AEJP02000002.1 6758 6907 2 + 150 hypothetical protein - none -
fig|6666666.229930.peg.79 CDS AEJP02000002.1 6987 7991 3 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229930.peg.80 CDS AEJP02000002.1 8501 8085 -2 - 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229930.peg.81 CDS AEJP02000002.1 8622 9002 3 + 381 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229930.peg.82 CDS AEJP02000002.1 8995 9288 1 + 294 UPF0125 protein yfjF - none -
fig|6666666.229930.peg.83 CDS AEJP02000002.1 9321 10514 3 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229930.peg.84 CDS AEJP02000002.1 10521 11855 3 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229930.peg.85 CDS AEJP02000002.1 12715 11861 -1 - 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229930.peg.86 CDS AEJP02000002.1 13264 12743 -1 - 522 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229930.peg.87 CDS AEJP02000002.1 13993 13268 -1 - 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229930.peg.88 CDS AEJP02000002.1 14517 13999 -3 - 519 LptA, protein essential for LPS transport across the periplasm KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229930.peg.89 CDS AEJP02000002.1 15073 14498 -1 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229930.peg.90 CDS AEJP02000002.1 15357 16154 3 + 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229930.peg.91 CDS AEJP02000002.1 16148 16933 2 + 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229930.peg.92 CDS AEJP02000002.1 16956 17465 3 + 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229930.peg.93 CDS AEJP02000002.1 17494 18135 1 + 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229930.peg.94 CDS AEJP02000002.1 18229 18498 1 + 270 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229930.peg.95 CDS AEJP02000002.1 18498 18755 3 + 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229930.peg.96 CDS AEJP02000002.1 18772 20043 1 + 1272 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229930.peg.97 CDS AEJP02000002.1 20794 21741 1 + 948 Putative secretion ATPase - none -
fig|6666666.229930.peg.98 CDS AEJP02000002.1 23166 22087 -3 - 1080 glycosyl transferase, family 2 - none -
fig|6666666.229930.peg.99 CDS AEJP02000002.1 23943 23653 -3 - 291 FIG00696346: hypothetical protein - none -
fig|6666666.229930.peg.100 CDS AEJP02000002.1 24146 25576 2 + 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229930.peg.101 CDS AEJP02000002.1 25653 26192 3 + 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229930.peg.102 CDS AEJP02000002.1 26189 26857 2 + 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229930.peg.103 CDS AEJP02000002.1 26922 27647 3 + 726 Integral membrane protein TerC - none -
fig|6666666.229930.peg.104 CDS AEJP02000003.1 783 271 -3 - 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis;
Transport system clustering with HemG
fig|6666666.229930.peg.105 CDS AEJP02000003.1 2246 783 -2 - 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229930.peg.106 CDS AEJP02000003.1 2784 2512 -3 - 273 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229930.peg.107 CDS AEJP02000003.1 2872 3117 1 + 246 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229930.peg.108 CDS AEJP02000003.1 3437 4708 2 + 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229930.peg.109 CDS AEJP02000003.1 4724 5407 2 + 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229930.peg.110 CDS AEJP02000003.1 5537 6766 2 + 1230 Tyrosine-specific transport protein - none -
fig|6666666.229930.peg.111 CDS AEJP02000003.1 8176 7787 -1 - 390 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.229930.peg.112 CDS AEJP02000003.1 9207 8218 -3 - 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229930.peg.113 CDS AEJP02000003.1 9694 9236 -1 - 459 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229930.peg.114 CDS AEJP02000003.1 10275 9886 -3 - 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229930.peg.115 CDS AEJP02000003.1 10647 10291 -3 - 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229930.peg.116 CDS AEJP02000003.1 10902 10789 -3 - 114 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.229930.peg.117 CDS AEJP02000003.1 12253 10928 -1 - 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229930.peg.118 CDS AEJP02000003.1 12691 12257 -1 - 435 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.229930.peg.119 CDS AEJP02000003.1 13381 12881 -1 - 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229930.peg.120 CDS AEJP02000003.1 13750 13397 -1 - 354 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.229930.peg.121 CDS AEJP02000003.1 14297 13764 -2 - 534 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.229930.peg.122 CDS AEJP02000003.1 14705 14313 -2 - 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229930.peg.123 CDS AEJP02000003.1 15047 14742 -2 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229930.peg.124 CDS AEJP02000003.1 15488 15060 -2 - 429 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.229930.peg.125 CDS AEJP02000003.1 15928 15617 -1 - 312 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.229930.peg.126 CDS AEJP02000003.1 16310 15939 -2 - 372 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.229930.peg.127 CDS AEJP02000006.1 81 242 3 + 162 hypothetical protein - none -
fig|6666666.229930.peg.128 CDS AEJP02000006.1 285 1112 3 + 828 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229930.peg.129 CDS AEJP02000006.1 3212 1245 -2 - 1968 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229930.peg.130 CDS AEJP02000006.1 4942 3593 -1 - 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229930.peg.131 CDS AEJP02000006.1 5160 5678 3 + 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229930.peg.132 CDS AEJP02000006.1 5797 5675 -1 - 123 hypothetical protein - none -
fig|6666666.229930.peg.133 CDS AEJP02000006.1 6746 5748 -2 - 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229930.peg.134 CDS AEJP02000006.1 7619 6795 -2 - 825 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229930.peg.135 CDS AEJP02000006.1 8650 8162 -1 - 489 Phage protein - none -
fig|6666666.229930.peg.136 CDS AEJP02000006.1 9009 8662 -3 - 348 Mu phage DNA transposition protein B - none -
fig|6666666.229930.peg.137 CDS AEJP02000006.1 10232 9045 -2 - 1188 Transposase - none -
fig|6666666.229930.peg.138 CDS AEJP02000006.1 10240 10707 1 + 468 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229930.peg.139 CDS AEJP02000006.1 10700 11413 2 + 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229930.peg.140 CDS AEJP02000006.1 14265 11980 -3 - 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229930.peg.141 CDS AEJP02000006.1 14561 15160 2 + 600 Hydrogenase-4 component A - none -
fig|6666666.229930.peg.142 CDS AEJP02000006.1 15193 17214 1 + 2022 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229930.peg.143 CDS AEJP02000006.1 17225 18187 2 + 963 Hydrogenase-4 component C - none -
fig|6666666.229930.peg.144 CDS AEJP02000006.1 18200 19645 2 + 1446 Hydrogenase-4 component D - none -
fig|6666666.229930.peg.145 CDS AEJP02000006.1 19656 20294 3 + 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229930.peg.146 CDS AEJP02000006.1 20299 21837 1 + 1539 Hydrogenase-4 component F - none -
fig|6666666.229930.peg.147 CDS AEJP02000006.1 21856 23586 1 + 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229930.peg.148 CDS AEJP02000006.1 23600 24247 2 + 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229930.peg.149 CDS AEJP02000006.1 24244 25020 1 + 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229930.peg.150 CDS AEJP02000006.1 25155 25559 3 + 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229930.peg.151 CDS AEJP02000006.1 25588 26010 1 + 423 Hydrogenase 3 maturation protease (EC 3.4.-.-) - none -
fig|6666666.229930.peg.152 CDS AEJP02000006.1 26539 28761 1 + 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229930.peg.155 CDS AEJP02000006.1 29804 28932 -2 - 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229930.peg.156 CDS AEJP02000006.1 30984 29815 -3 - 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229930.peg.157 CDS AEJP02000006.1 31181 31041 -2 - 141 hypothetical protein - none -
fig|6666666.229930.peg.158 CDS AEJP02000006.1 32394 31171 -3 - 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229930.peg.159 CDS AEJP02000006.1 32396 32530 2 + 135 hypothetical protein - none -
fig|6666666.229930.peg.160 CDS AEJP02000006.1 35326 32519 -1 - 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229930.peg.161 CDS AEJP02000006.1 35411 35533 2 + 123 hypothetical protein - none -
fig|6666666.229930.peg.162 CDS AEJP02000006.1 36240 35602 -3 - 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229930.peg.163 CDS AEJP02000006.1 36764 36318 -2 - 447 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229930.peg.164 CDS AEJP02000006.1 38451 36943 -3 - 1509 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229930.peg.165 CDS AEJP02000006.1 40586 38529 -2 - 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229930.peg.166 CDS AEJP02000006.1 41268 40660 -3 - 609 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229930.peg.167 CDS AEJP02000006.1 41486 42769 2 + 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229930.peg.168 CDS AEJP02000008.1 577 326 -1 - 252 Transcriptional regulator, XRE family - none -
fig|6666666.229930.peg.169 CDS AEJP02000008.1 728 2365 2 + 1638 NAD-dependent malic enzyme (EC 1.1.1.38) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229930.peg.170 CDS AEJP02000008.1 3784 2585 -1 - 1200 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229930.peg.171 CDS AEJP02000008.1 4830 3781 -3 - 1050 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229930.peg.172 CDS AEJP02000008.1 5357 4827 -2 - 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229930.peg.173 CDS AEJP02000008.1 7260 5350 -3 - 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229930.peg.174 CDS AEJP02000008.1 7282 7650 1 + 369 hypothetical protein - none -
fig|6666666.229930.peg.175 CDS AEJP02000008.1 8812 7847 -1 - 966 NrfD protein - none -
fig|6666666.229930.peg.176 CDS AEJP02000008.1 9486 8809 -3 - 678 NrfC protein - none -
fig|6666666.229930.peg.177 CDS AEJP02000008.1 10148 9483 -2 - 666 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229930.peg.178 CDS AEJP02000008.1 11745 10222 -3 - 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229930.peg.179 CDS AEJP02000008.1 12552 12262 -3 - 291 hypothetical protein - none -
fig|6666666.229930.peg.180 CDS AEJP02000008.1 13118 12570 -2 - 549 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229930.peg.181 CDS AEJP02000008.1 14251 13328 -1 - 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229930.peg.182 CDS AEJP02000008.1 14703 14251 -3 - 453 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229930.peg.183 CDS AEJP02000008.1 15347 14802 -2 - 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229930.peg.184 CDS AEJP02000008.1 17334 15376 -3 - 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229930.peg.185 CDS AEJP02000008.1 17852 17334 -2 - 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229930.peg.186 CDS AEJP02000008.1 18055 17849 -1 - 207 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229930.peg.187 CDS AEJP02000008.1 18810 18073 -3 - 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229930.peg.188 CDS AEJP02000008.1 19486 18821 -1 - 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229930.peg.189 CDS AEJP02000008.1 20126 19491 -2 - 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229930.peg.190 CDS AEJP02000008.1 21491 20298 -2 - 1194 Bicyclomycin resistance protein - none -
fig|6666666.229930.peg.191 CDS AEJP02000008.1 22197 21496 -3 - 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229930.peg.192 CDS AEJP02000008.1 22239 22421 3 + 183 hypothetical protein - none -
fig|6666666.229930.peg.193 CDS AEJP02000008.1 22414 24678 1 + 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229930.peg.194 CDS AEJP02000008.1 24822 25466 3 + 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229930.peg.195 CDS AEJP02000008.1 25877 26668 2 + 792 putative lipoprotein - none -
fig|6666666.229930.peg.196 CDS AEJP02000008.1 27699 26872 -3 - 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229930.peg.197 CDS AEJP02000008.1 27839 28282 2 + 444 FIG00904084: hypothetical protein - none -
fig|6666666.229930.peg.198 CDS AEJP02000008.1 28968 28372 -3 - 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.199 CDS AEJP02000008.1 29065 29418 1 + 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229930.peg.200 CDS AEJP02000008.1 29439 30869 3 + 1431 Transglycosylase, Slt family - none -
fig|6666666.229930.peg.201 CDS AEJP02000008.1 30880 31026 1 + 147 hypothetical protein - none -
fig|6666666.229930.peg.202 CDS AEJP02000008.1 31608 31069 -3 - 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229930.peg.203 CDS AEJP02000008.1 33176 31632 -2 - 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229930.peg.204 CDS AEJP02000008.1 33371 34102 2 + 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229930.peg.205 CDS AEJP02000008.1 35437 34223 -1 - 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229930.peg.206 CDS AEJP02000008.1 35554 36858 1 + 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229930.peg.207 CDS AEJP02000008.1 36849 38555 3 + 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229930.peg.208 CDS AEJP02000008.1 38608 39357 1 + 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229930.peg.209 CDS AEJP02000008.1 39453 39722 3 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229930.peg.210 CDS AEJP02000008.1 39930 41084 3 + 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229930.peg.211 CDS AEJP02000008.1 41153 41653 2 + 501 Protein sprT - none -
fig|6666666.229930.peg.212 CDS AEJP02000008.1 41810 43051 2 + 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229930.peg.213 CDS AEJP02000008.1 43904 44506 2 + 603 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229930.peg.214 CDS AEJP02000008.1 45736 44687 -1 - 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229930.peg.215 CDS AEJP02000008.1 46031 47170 2 + 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229930.peg.216 CDS AEJP02000008.1 47192 47743 2 + 552 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229930.peg.217 CDS AEJP02000008.1 47887 48942 1 + 1056 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229930.peg.218 CDS AEJP02000008.1 48954 50057 3 + 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229930.peg.219 CDS AEJP02000008.1 50079 51356 3 + 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229930.peg.220 CDS AEJP02000008.1 51367 51981 1 + 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229930.peg.221 CDS AEJP02000008.1 52034 52486 2 + 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229930.peg.222 CDS AEJP02000008.1 53196 52492 -3 - 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229930.peg.223 CDS AEJP02000008.1 53182 53319 1 + 138 hypothetical protein - none -
fig|6666666.229930.peg.224 CDS AEJP02000008.1 54569 53316 -2 - 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229930.peg.225 CDS AEJP02000008.1 55319 54693 -2 - 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229930.peg.226 CDS AEJP02000008.1 57301 55454 -1 - 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229930.peg.227 CDS AEJP02000008.1 59707 57434 -1 - 2274 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229930.peg.228 CDS AEJP02000008.1 59835 59704 -3 - 132 hypothetical protein - none -
fig|6666666.229930.peg.229 CDS AEJP02000008.1 59939 61540 2 + 1602 Dca - none -
fig|6666666.229930.peg.230 CDS AEJP02000008.1 61797 62363 3 + 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229930.peg.231 CDS AEJP02000008.1 62373 63614 3 + 1242 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229930.peg.232 CDS AEJP02000008.1 64000 63677 -1 - 324 FIG074102: hypothetical protein - none -
fig|6666666.229930.peg.233 CDS AEJP02000008.1 64157 63993 -2 - 165 Phage-related protein - none -
fig|6666666.229930.peg.234 CDS AEJP02000008.1 65305 64460 -1 - 846 membrane protein, putative - none -
fig|6666666.229930.peg.235 CDS AEJP02000008.1 67537 65378 -1 - 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229930.peg.236 CDS AEJP02000008.1 67836 67624 -3 - 213 Copper chaperone Copper homeostasis
fig|6666666.229930.peg.237 CDS AEJP02000008.1 67931 68317 2 + 387 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229930.peg.238 CDS AEJP02000008.1 68609 68893 2 + 285 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229930.peg.239 CDS AEJP02000008.1 68916 69872 3 + 957 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229930.peg.240 CDS AEJP02000008.1 71036 70200 -2 - 837 COG1720: Uncharacterized conserved protein tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229930.peg.241 CDS AEJP02000008.1 71149 72069 1 + 921 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229930.peg.242 CDS AEJP02000008.1 72120 72620 3 + 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229930.peg.243 CDS AEJP02000008.1 72809 74191 2 + 1383 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229930.peg.244 CDS AEJP02000008.1 74794 74261 -1 - 534 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229930.peg.245 CDS AEJP02000008.1 74915 76276 2 + 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229930.peg.246 CDS AEJP02000008.1 76515 77054 3 + 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229930.peg.247 CDS AEJP02000008.1 78263 77124 -2 - 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229930.peg.248 CDS AEJP02000008.1 79534 78260 -1 - 1275 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229930.peg.249 CDS AEJP02000008.1 80769 79666 -3 - 1104 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229930.peg.250 CDS AEJP02000008.1 81074 81649 2 + 576 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229930.peg.251 CDS AEJP02000008.1 83567 81771 -2 - 1797 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229930.peg.252 CDS AEJP02000008.1 84596 83694 -2 - 903 Lipoprotein nlpI precursor - none -
fig|6666666.229930.peg.253 CDS AEJP02000008.1 86912 84681 -2 - 2232 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229930.peg.254 CDS AEJP02000008.1 87104 87574 2 + 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229930.peg.255 CDS AEJP02000008.1 88701 88048 -3 - 654 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229930.peg.256 CDS AEJP02000008.1 88724 89176 2 + 453 Type IV pilin PilA Type IV pilus
fig|6666666.229930.peg.257 CDS AEJP02000008.1 89203 90612 1 + 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229930.peg.258 CDS AEJP02000008.1 90605 91828 2 + 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229930.peg.259 CDS AEJP02000008.1 91825 92514 1 + 690 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229930.peg.260 CDS AEJP02000008.1 92564 93187 2 + 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229930.peg.261 CDS AEJP02000008.1 93177 93389 3 + 213 FIG003276: zinc-binding protein - none -
fig|6666666.229930.peg.262 CDS AEJP02000008.1 93389 93661 2 + 273 FIG00904058: hypothetical protein - none -
fig|6666666.229930.peg.263 CDS AEJP02000008.1 94058 95431 2 + 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229930.peg.264 CDS AEJP02000008.1 95659 95982 1 + 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229930.peg.265 CDS AEJP02000008.1 96437 96685 2 + 249 unknown - none -
fig|6666666.229930.peg.266 CDS AEJP02000008.1 97600 97301 -1 - 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229930.peg.267 CDS AEJP02000008.1 98196 97594 -3 - 603 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229930.peg.268 CDS AEJP02000008.1 98642 98190 -2 - 453 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229930.peg.269 CDS AEJP02000008.1 99771 98887 -3 - 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229930.peg.270 CDS AEJP02000008.1 100233 99784 -3 - 450 Protein involved in cell division - none -
fig|6666666.229930.peg.271 CDS AEJP02000008.1 101781 100345 -3 - 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229930.peg.272 CDS AEJP02000008.1 102050 101778 -2 - 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229930.peg.273 CDS AEJP02000008.1 103462 102074 -1 - 1389 FOG: TPR repeat - none -
fig|6666666.229930.peg.274 CDS AEJP02000008.1 104517 104383 -3 - 135 hypothetical protein - none -
fig|6666666.229930.peg.275 CDS AEJP02000008.1 105972 104626 -3 - 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229930.peg.276 CDS AEJP02000008.1 106482 106015 -3 - 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229930.peg.277 CDS AEJP02000008.1 106499 106651 2 + 153 hypothetical protein - none -
fig|6666666.229930.peg.278 CDS AEJP02000008.1 107082 106606 -3 - 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229930.peg.279 CDS AEJP02000008.1 108182 107181 -2 - 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229930.peg.280 CDS AEJP02000008.1 108492 108163 -3 - 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229930.peg.281 CDS AEJP02000008.1 108893 108474 -2 - 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229930.peg.282 CDS AEJP02000008.1 109790 108933 -2 - 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229930.peg.283 CDS AEJP02000008.1 110669 109902 -2 - 768 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229930.peg.284 CDS AEJP02000008.1 110842 111285 1 + 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229930.peg.285 CDS AEJP02000008.1 112726 111359 -1 - 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229930.peg.286 CDS AEJP02000008.1 113179 112745 -1 - 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229930.peg.287 CDS AEJP02000008.1 113752 113192 -1 - 561 Protein of unknown function DUF414 - none -
fig|6666666.229930.peg.288 CDS AEJP02000008.1 114380 113853 -2 - 528 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229930.peg.289 CDS AEJP02000008.1 115557 114706 -3 - 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229930.peg.290 CDS AEJP02000008.1 116351 115554 -2 - 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229930.peg.291 CDS AEJP02000008.1 117157 116360 -1 - 798 Protein of unknown function DUF81 - none -
fig|6666666.229930.peg.292 CDS AEJP02000008.1 117759 117160 -3 - 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229930.peg.293 CDS AEJP02000008.1 117979 118398 1 + 420 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229930.peg.294 CDS AEJP02000008.1 118409 119917 2 + 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229930.peg.295 CDS AEJP02000008.1 119914 120810 1 + 897 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229930.peg.296 CDS AEJP02000008.1 120900 121772 3 + 873 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229930.peg.297 CDS AEJP02000008.1 121855 122787 1 + 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229930.peg.298 CDS AEJP02000008.1 123094 122885 -1 - 210 Cold shock protein CspG Cold shock, CspA family of proteins
fig|6666666.229930.peg.299 CDS AEJP02000008.1 124986 123541 -3 - 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229930.peg.300 CDS AEJP02000008.1 125674 126462 1 + 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229930.peg.301 CDS AEJP02000008.1 126575 127951 2 + 1377 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229930.peg.302 CDS AEJP02000008.1 128253 129602 3 + 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229930.peg.303 CDS AEJP02000008.1 130091 131545 2 + 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229930.peg.304 CDS AEJP02000008.1 132376 132218 -1 - 159 hypothetical protein - none -
fig|6666666.229930.peg.305 CDS AEJP02000008.1 136150 132674 -1 - 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229930.peg.306 CDS AEJP02000008.1 136115 136294 2 + 180 hypothetical protein - none -
fig|6666666.229930.peg.307 CDS AEJP02000008.1 136349 138136 2 + 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229930.peg.308 CDS AEJP02000008.1 138153 138269 3 + 117 hypothetical protein - none -
fig|6666666.229930.peg.309 CDS AEJP02000008.1 139015 144378 1 + 5364 Autotransporter adhesin - none -
fig|6666666.229930.peg.310 CDS AEJP02000008.1 144632 146758 2 + 2127 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229930.peg.311 CDS AEJP02000008.1 146939 147058 2 + 120 hypothetical protein - none -
fig|6666666.229930.peg.312 CDS AEJP02000008.1 147326 147201 -2 - 126 hypothetical protein - none -
fig|6666666.229930.peg.313 CDS AEJP02000008.1 147360 147827 3 + 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229930.peg.314 CDS AEJP02000008.1 148642 147854 -1 - 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229930.peg.315 CDS AEJP02000008.1 148926 148645 -3 - 282 hypothetical protein - none -
fig|6666666.229930.peg.316 CDS AEJP02000008.1 149074 148919 -1 - 156 hypothetical protein - none -
fig|6666666.229930.peg.317 CDS AEJP02000008.1 149680 149168 -1 - 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229930.peg.318 CDS AEJP02000008.1 149750 151159 2 + 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229930.peg.319 CDS AEJP02000008.1 152269 151307 -1 - 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229930.peg.320 CDS AEJP02000008.1 152972 152334 -2 - 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229930.peg.321 CDS AEJP02000008.1 153317 153018 -2 - 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229930.peg.322 CDS AEJP02000008.1 154580 153390 -2 - 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229930.peg.323 CDS AEJP02000008.1 155468 154611 -2 - 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229930.peg.324 CDS AEJP02000008.1 156638 155517 -2 - 1122 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229930.peg.325 CDS AEJP02000008.1 158586 156625 -3 - 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229930.peg.326 CDS AEJP02000008.1 159135 158599 -3 - 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229930.peg.327 CDS AEJP02000008.1 159434 159126 -2 - 309 Iojap protein - none -
fig|6666666.229930.peg.328 CDS AEJP02000008.1 160757 159501 -2 - 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229930.peg.329 CDS AEJP02000008.1 161082 162320 3 + 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229930.peg.330 CDS AEJP02000008.1 163680 162445 -3 - 1236 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229930.peg.331 CDS AEJP02000008.1 163767 163880 3 + 114 hypothetical protein - none -
fig|6666666.229930.peg.332 CDS AEJP02000008.1 164145 163915 -3 - 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.333 CDS AEJP02000008.1 165147 164419 -3 - 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229930.peg.334 CDS AEJP02000008.1 166110 165172 -3 - 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229930.peg.335 CDS AEJP02000008.1 167167 166217 -1 - 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229930.peg.336 CDS AEJP02000008.1 168233 167214 -2 - 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.337 CDS AEJP02000008.1 168430 168260 -1 - 171 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.229930.peg.338 CDS AEJP02000008.1 168971 168447 -2 - 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229930.peg.339 CDS AEJP02000008.1 169684 169043 -1 - 642 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229930.peg.340 CDS AEJP02000008.1 170424 169684 -3 - 741 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229930.peg.341 CDS AEJP02000008.1 171092 170442 -2 - 651 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229930.peg.342 CDS AEJP02000008.1 172248 171073 -3 - 1176 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229930.peg.343 CDS AEJP02000008.1 173530 172241 -1 - 1290 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229930.peg.344 CDS AEJP02000008.1 173753 174622 2 + 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.345 CDS AEJP02000008.1 174648 175280 3 + 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229930.peg.346 CDS AEJP02000008.1 175745 175344 -2 - 402 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229930.peg.347 CDS AEJP02000008.1 175987 175775 -1 - 213 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229930.peg.348 CDS AEJP02000008.1 176147 175968 -2 - 180 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229930.peg.349 CDS AEJP02000008.1 176298 177083 3 + 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229930.peg.350 CDS AEJP02000008.1 177085 177549 1 + 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229930.peg.351 CDS AEJP02000008.1 177589 178074 1 + 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229930.peg.352 CDS AEJP02000008.1 179504 178194 -2 - 1311 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229930.peg.353 CDS AEJP02000008.1 179458 179598 1 + 141 hypothetical protein - none -
fig|6666666.229930.peg.354 CDS AEJP02000008.1 180119 179595 -2 - 525 FIG00696143: hypothetical protein - none -
fig|6666666.229930.peg.355 CDS AEJP02000008.1 180933 180151 -3 - 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229930.peg.356 CDS AEJP02000008.1 181920 180937 -3 - 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229930.peg.357 CDS AEJP02000008.1 182549 181917 -2 - 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229930.peg.358 CDS AEJP02000008.1 183594 182551 -3 - 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229930.peg.359 CDS AEJP02000008.1 184071 183733 -3 - 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229930.peg.360 CDS AEJP02000008.1 184905 184147 -3 - 759 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229930.peg.361 CDS AEJP02000008.1 185143 186003 1 + 861 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229930.peg.362 CDS AEJP02000008.1 186006 187250 3 + 1245 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) - none -
fig|6666666.229930.peg.363 CDS AEJP02000008.1 187247 187879 2 + 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229930.peg.364 CDS AEJP02000008.1 187882 188658 1 + 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229930.peg.365 CDS AEJP02000008.1 188747 189892 2 + 1146 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229930.peg.366 CDS AEJP02000008.1 189936 191186 3 + 1251 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229930.peg.367 CDS AEJP02000008.1 191382 192200 3 + 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229930.peg.368 CDS AEJP02000008.1 195006 192406 -3 - 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229930.peg.369 CDS AEJP02000008.1 196137 195091 -3 - 1047 hypothetical protein - none -
fig|6666666.229930.peg.370 CDS AEJP02000008.1 197079 196321 -3 - 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229930.peg.371 CDS AEJP02000008.1 198178 197081 -1 - 1098 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) RNA methylation;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229930.peg.372 CDS AEJP02000008.1 198577 198248 -1 - 330 Protein yifE - none -
fig|6666666.229930.peg.373 CDS AEJP02000008.1 199254 198637 -3 - 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229930.peg.374 CDS AEJP02000008.1 199539 199273 -3 - 267 Protein yihD - none -
fig|6666666.229930.peg.375 CDS AEJP02000008.1 199623 200207 3 + 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229930.peg.376 CDS AEJP02000008.1 200306 200836 2 + 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229930.peg.377 CDS AEJP02000008.1 200948 202477 2 + 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229930.peg.378 CDS AEJP02000008.1 202480 203421 1 + 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229930.peg.379 CDS AEJP02000008.1 203426 205090 2 + 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229930.peg.380 CDS AEJP02000008.1 205719 205198 -3 - 522 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229930.peg.381 CDS AEJP02000008.1 205734 206285 3 + 552 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229930.peg.382 CDS AEJP02000008.1 206325 206663 3 + 339 hypothetical protein - none -
fig|6666666.229930.peg.383 CDS AEJP02000008.1 206809 207513 1 + 705 hypothetical protein - none -
fig|6666666.229930.peg.384 CDS AEJP02000008.1 207954 208364 3 + 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229930.peg.385 CDS AEJP02000008.1 208366 208917 1 + 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229930.peg.386 CDS AEJP02000008.1 209073 209501 3 + 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229930.peg.387 CDS AEJP02000008.1 209506 210195 1 + 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229930.peg.388 CDS AEJP02000008.1 210210 210386 3 + 177 hypothetical protein - none -
fig|6666666.229930.peg.389 CDS AEJP02000008.1 210557 211048 2 + 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229930.peg.390 CDS AEJP02000008.1 211100 211471 2 + 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229930.peg.391 CDS AEJP02000008.1 211742 215770 2 + 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229930.peg.392 CDS AEJP02000008.1 215873 220141 2 + 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229930.peg.393 CDS AEJP02000009.1 1057 158 -1 - 900 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229930.peg.394 CDS AEJP02000009.1 1220 2707 2 + 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229930.peg.395 CDS AEJP02000009.1 2723 3751 2 + 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229930.peg.396 CDS AEJP02000009.1 3757 4329 1 + 573 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229930.peg.397 CDS AEJP02000009.1 4443 5177 3 + 735 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229930.peg.398 CDS AEJP02000009.1 7566 5251 -3 - 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229930.peg.399 CDS AEJP02000009.1 8670 7783 -3 - 888 RuBisCO operon transcriptional regulator CO2 uptake, carboxysome
fig|6666666.229930.peg.400 CDS AEJP02000009.1 8780 10249 2 + 1470 Sodium-dependent transporter - none -
fig|6666666.229930.peg.401 CDS AEJP02000009.1 10261 10860 1 + 600 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229930.peg.402 CDS AEJP02000009.1 11384 11250 -2 - 135 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229930.peg.403 CDS AEJP02000009.1 11595 12077 3 + 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229930.peg.404 CDS AEJP02000009.1 12351 12160 -3 - 192 hypothetical protein - none -
fig|6666666.229930.peg.405 CDS AEJP02000009.1 12953 12366 -2 - 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229930.peg.406 CDS AEJP02000009.1 13420 13139 -1 - 282 hypothetical protein - none -
fig|6666666.229930.peg.407 CDS AEJP02000009.1 13682 14419 2 + 738 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229930.peg.408 CDS AEJP02000009.1 15737 14460 -2 - 1278 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229930.peg.409 CDS AEJP02000009.1 17135 15750 -2 - 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229930.peg.410 CDS AEJP02000009.1 17912 17166 -2 - 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229930.peg.411 CDS AEJP02000009.1 18851 17925 -2 - 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229930.peg.412 CDS AEJP02000009.1 19007 21508 2 + 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229930.peg.413 CDS AEJP02000009.1 21518 22147 2 + 630 Nitrate/nitrite response regulator protein - none -
fig|6666666.229930.peg.414 CDS AEJP02000009.1 22214 24073 2 + 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229930.peg.415 CDS AEJP02000009.1 24101 27979 2 + 3879 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229930.peg.416 CDS AEJP02000009.1 27982 29529 1 + 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229930.peg.417 CDS AEJP02000009.1 31210 29594 -1 - 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.229930.peg.418 CDS AEJP02000009.1 31349 31471 2 + 123 hypothetical protein - none -
fig|6666666.229930.peg.419 CDS AEJP02000009.1 31468 32112 1 + 645 converved hypothetical protein - none -
fig|6666666.229930.peg.420 CDS AEJP02000009.1 32161 33051 1 + 891 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229930.peg.421 CDS AEJP02000009.1 33048 34112 3 + 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229930.peg.422 CDS AEJP02000009.1 34130 34720 2 + 591 FIG01200173: hypothetical protein - none -
fig|6666666.229930.peg.423 CDS AEJP02000009.1 34887 35159 3 + 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229930.peg.424 CDS AEJP02000009.1 35285 36082 2 + 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229930.peg.425 CDS AEJP02000009.1 36137 37972 2 + 1836 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229930.peg.426 CDS AEJP02000009.1 38766 38125 -3 - 642 FIG01220323: hypothetical protein - none -
fig|6666666.229930.peg.427 CDS AEJP02000009.1 39540 39304 -3 - 237 FIG00699267: hypothetical protein - none -
fig|6666666.229930.peg.428 CDS AEJP02000009.1 40041 39733 -3 - 309 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229930.peg.429 CDS AEJP02000009.1 40333 40094 -1 - 240 hypothetical protein - none -
fig|6666666.229930.peg.430 CDS AEJP02000009.1 40967 40326 -2 - 642 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229930.peg.431 CDS AEJP02000009.1 41114 40983 -2 - 132 hypothetical protein - none -
fig|6666666.229930.peg.432 CDS AEJP02000009.1 41375 41542 2 + 168 hypothetical protein - none -
fig|6666666.229930.peg.433 CDS AEJP02000009.1 41539 41823 1 + 285 hypothetical protein - none -
fig|6666666.229930.peg.434 CDS AEJP02000009.1 42657 42220 -3 - 438 hypothetical protein - none -
fig|6666666.229930.peg.435 CDS AEJP02000009.1 44427 42691 -3 - 1737 Type IV secretion system protein VirD4 - none -
fig|6666666.229930.peg.436 CDS AEJP02000009.1 45461 44430 -2 - 1032 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB11) - none -
fig|6666666.229930.peg.437 CDS AEJP02000009.1 45704 45474 -2 - 231 Inner membrane protein of type IV secretion of T-DNA complex, TonB-like, VirB10 - none -
fig|6666666.229930.peg.438 CDS AEJP02000009.1 46270 45698 -1 - 573 hypothetical protein - none -
fig|6666666.229930.peg.439 CDS AEJP02000009.1 46862 46635 -2 - 228 hypothetical protein - none -
fig|6666666.229930.peg.440 CDS AEJP02000009.1 47607 46876 -3 - 732 Minor pilin of type IV secretion complex, VirB5 - none -
fig|6666666.229930.peg.441 CDS AEJP02000009.1 49285 47618 -1 - 1668 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229930.peg.442 CDS AEJP02000009.1 49634 50527 2 + 894 Transcriptional regulator, LysR family - none -
fig|6666666.229930.peg.443 CDS AEJP02000009.1 51369 50605 -3 - 765 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229930.peg.444 CDS AEJP02000009.1 53257 51758 -1 - 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.229930.peg.445 CDS AEJP02000009.1 53383 54051 1 + 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229930.peg.446 CDS AEJP02000009.1 54054 54527 3 + 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229930.peg.447 CDS AEJP02000009.1 54524 55354 2 + 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229930.peg.448 CDS AEJP02000009.1 55351 55785 1 + 435 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229930.peg.449 CDS AEJP02000009.1 55951 57159 1 + 1209 Sodium/glutamate symport protein - none -
fig|6666666.229930.peg.450 CDS AEJP02000009.1 58603 57215 -1 - 1389 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229930.peg.451 CDS AEJP02000009.1 59343 58648 -3 - 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229930.peg.452 CDS AEJP02000009.1 59798 59385 -2 - 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229930.peg.453 CDS AEJP02000009.1 60889 59864 -1 - 1026 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229930.peg.454 CDS AEJP02000009.1 61016 61240 2 + 225 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229930.peg.455 CDS AEJP02000009.1 61245 62984 3 + 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229930.peg.456 CDS AEJP02000009.1 63243 64232 3 + 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229930.peg.457 CDS AEJP02000009.1 65196 64330 -3 - 867 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229930.peg.458 CDS AEJP02000009.1 65306 65731 2 + 426 Universal stress protein A Universal stress protein family
fig|6666666.229930.peg.459 CDS AEJP02000009.1 65931 68555 3 + 2625 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229930.peg.460 CDS AEJP02000009.1 68678 68860 2 + 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229930.peg.461 CDS AEJP02000009.1 68892 70256 3 + 1365 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229930.peg.462 CDS AEJP02000009.1 70332 71219 3 + 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229930.peg.463 CDS AEJP02000009.1 71374 71691 1 + 318 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229930.peg.464 CDS AEJP02000009.1 71779 71648 -1 - 132 hypothetical protein - none -
fig|6666666.229930.peg.465 CDS AEJP02000009.1 71877 72512 3 + 636 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229930.peg.466 CDS AEJP02000009.1 72529 73086 1 + 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229930.peg.467 CDS AEJP02000009.1 73086 73505 3 + 420 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.229930.peg.468 CDS AEJP02000009.1 74911 73601 -1 - 1311 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.229930.peg.469 CDS AEJP02000009.1 75096 74980 -3 - 117 hypothetical protein - none -
fig|6666666.229930.peg.470 CDS AEJP02000009.1 76700 75549 -2 - 1152 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229930.peg.471 CDS AEJP02000009.1 77218 76961 -1 - 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.472 CDS AEJP02000009.1 78385 77297 -1 - 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229930.peg.473 CDS AEJP02000009.1 78531 78382 -3 - 150 hypothetical protein - none -
fig|6666666.229930.peg.474 CDS AEJP02000009.1 79771 78536 -1 - 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.475 CDS AEJP02000009.1 80379 79783 -3 - 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.476 CDS AEJP02000009.1 81012 80383 -3 - 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.477 CDS AEJP02000009.1 81179 81012 -2 - 168 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.478 CDS AEJP02000010.1 24 296 3 + 273 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229930.peg.479 CDS AEJP02000010.1 316 711 1 + 396 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) CBSS-326442.4.peg.1852;
Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229930.peg.480 CDS AEJP02000010.1 809 1690 2 + 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229930.peg.481 CDS AEJP02000010.1 1690 2580 1 + 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229930.peg.482 CDS AEJP02000010.1 2580 3437 3 + 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229930.peg.483 CDS AEJP02000010.1 3434 4282 2 + 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229930.peg.484 CDS AEJP02000010.1 4529 4257 -2 - 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229930.peg.485 CDS AEJP02000010.1 4674 5348 3 + 675 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229930.peg.486 CDS AEJP02000010.1 5411 5869 2 + 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229930.peg.487 CDS AEJP02000010.1 5869 6342 1 + 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229930.peg.488 CDS AEJP02000010.1 6351 8492 3 + 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229930.peg.489 CDS AEJP02000010.1 8995 8489 -1 - 507 FIG001674: hypothetical protein - none -
fig|6666666.229930.peg.490 CDS AEJP02000010.1 9058 10008 1 + 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p YrdC-YciO-Sua5 protein family
fig|6666666.229930.peg.491 CDS AEJP02000010.1 11119 10175 -1 - 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229930.peg.492 CDS AEJP02000010.1 11933 11109 -2 - 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229930.peg.493 CDS AEJP02000010.1 13151 11943 -2 - 1209 FIG00732228: membrane protein - none -
fig|6666666.229930.peg.494 CDS AEJP02000010.1 13297 13160 -1 - 138 FIG00732228: membrane protein - none -
fig|6666666.229930.peg.495 CDS AEJP02000010.1 13583 13314 -2 - 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229930.peg.496 CDS AEJP02000010.1 15083 14085 -2 - 999 FIG00781545: hypothetical protein - none -
fig|6666666.229930.peg.497 CDS AEJP02000010.1 17287 15344 -1 - 1944 ABC transporter ATP-binding protein - none -
fig|6666666.229930.peg.498 CDS AEJP02000010.1 18681 17329 -3 - 1353 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.229930.peg.499 CDS AEJP02000010.1 19375 18683 -1 - 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229930.peg.500 CDS AEJP02000010.1 19734 19375 -3 - 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229930.peg.501 CDS AEJP02000010.1 20204 20704 2 + 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229930.peg.502 CDS AEJP02000010.1 20710 21906 1 + 1197 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Archaea
fig|6666666.229930.peg.503 CDS AEJP02000010.1 21903 22283 3 + 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229930.peg.504 CDS AEJP02000010.1 23757 22327 -3 - 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229930.peg.505 CDS AEJP02000010.1 23871 24806 3 + 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229930.peg.506 CDS AEJP02000010.1 25427 24864 -2 - 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229930.peg.507 CDS AEJP02000010.1 26038 25427 -1 - 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229930.peg.508 CDS AEJP02000010.1 26493 26047 -3 - 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229930.peg.509 CDS AEJP02000010.1 27443 26517 -2 - 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229930.peg.510 CDS AEJP02000010.1 28785 27976 -3 - 810 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229930.peg.511 CDS AEJP02000010.1 30587 31969 2 + 1383 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229930.peg.512 CDS AEJP02000010.1 33214 32057 -1 - 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229930.peg.513 CDS AEJP02000010.1 34973 33297 -2 - 1677 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229930.peg.514 CDS AEJP02000010.1 35573 35016 -2 - 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229930.peg.515 CDS AEJP02000010.1 36327 35605 -3 - 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229930.peg.516 CDS AEJP02000010.1 38267 36330 -2 - 1938 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229930.peg.517 CDS AEJP02000010.1 38344 39162 1 + 819 Aldose 1-epimerase - none -
fig|6666666.229930.peg.518 CDS AEJP02000010.1 39572 40429 2 + 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229930.peg.519 CDS AEJP02000010.1 40489 41442 1 + 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229930.peg.520 CDS AEJP02000010.1 41548 43311 1 + 1764 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229930.peg.521 CDS AEJP02000010.1 43311 45044 3 + 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229930.peg.522 CDS AEJP02000010.1 45308 46174 2 + 867 Acyl-CoA thioesterase II (EC 3.1.2.-) Acyl-CoA thioesterase II
fig|6666666.229930.peg.523 CDS AEJP02000010.1 46451 46323 -2 - 129 hypothetical protein - none -
fig|6666666.229930.peg.524 CDS AEJP02000010.1 47233 46448 -1 - 786 serine/threonine protein kinase - none -
fig|6666666.229930.peg.525 CDS AEJP02000010.1 47814 47254 -3 - 561 unknown - none -
fig|6666666.229930.peg.526 CDS AEJP02000010.1 47977 48561 1 + 585 Putative lipoprotein yceB precursor - none -
fig|6666666.229930.peg.527 CDS AEJP02000010.1 49532 48618 -2 - 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229930.peg.528 CDS AEJP02000010.1 50251 49583 -1 - 669 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229930.peg.529 CDS AEJP02000010.1 50400 51053 3 + 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229930.peg.530 CDS AEJP02000010.1 51332 52072 2 + 741 FIG00698611: hypothetical protein - none -
fig|6666666.229930.peg.531 CDS AEJP02000010.1 52737 52234 -3 - 504 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229930.peg.532 CDS AEJP02000010.1 53240 52698 -2 - 543 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229930.peg.533 CDS AEJP02000010.1 54059 53265 -2 - 795 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229930.peg.534 CDS AEJP02000010.1 54862 54059 -1 - 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229930.peg.535 CDS AEJP02000010.1 55131 55006 -3 - 126 hypothetical protein - none -
fig|6666666.229930.peg.536 CDS AEJP02000010.1 56821 55403 -1 - 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229930.peg.537 CDS AEJP02000010.1 57740 56784 -2 - 957 O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-) - none -
fig|6666666.229930.peg.538 CDS AEJP02000010.1 58619 57750 -2 - 870 Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.229930.peg.539 CDS AEJP02000010.1 59696 58992 -2 - 705 Glycosyltransferase involved in cell wall biogenesis (EC 2.4.-.-) - none -
fig|6666666.229930.peg.540 CDS AEJP02000010.1 61416 60076 -3 - 1341 membrane protein, related to Actinobacillus protein (1944168) - none -
fig|6666666.229930.peg.541 CDS AEJP02000010.1 62095 61403 -1 - 693 NDP-hexose 4-ketoreductase UrdR - none -
fig|6666666.229930.peg.542 CDS AEJP02000010.1 63323 62067 -2 - 1257 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229930.peg.543 CDS AEJP02000010.1 64294 63323 -1 - 972 O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-) - none -
fig|6666666.229930.peg.544 CDS AEJP02000010.1 64917 64291 -3 - 627 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) Rhamnose containing glycans
fig|6666666.229930.peg.545 CDS AEJP02000010.1 65822 65031 -2 - 792 O-antigen export system permease protein RfbD - none -
fig|6666666.229930.peg.546 CDS AEJP02000010.1 66395 65856 -2 - 540 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229930.peg.547 CDS AEJP02000010.1 67276 66398 -1 - 879 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229930.peg.548 CDS AEJP02000010.1 68053 67277 -1 - 777 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229930.peg.549 CDS AEJP02000010.1 69294 68227 -3 - 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229930.peg.550 CDS AEJP02000010.1 70494 69364 -3 - 1131 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229930.peg.551 CDS AEJP02000010.1 71305 70496 -1 - 810 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229930.peg.552 CDS AEJP02000010.1 72255 71374 -3 - 882 Glycosyltransferase - none -
fig|6666666.229930.peg.553 CDS AEJP02000010.1 73448 72255 -2 - 1194 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229930.peg.554 CDS AEJP02000010.1 74233 73457 -1 - 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229930.peg.555 CDS AEJP02000010.1 74364 75887 3 + 1524 putative flippase - none -
fig|6666666.229930.peg.556 CDS AEJP02000010.1 75884 76840 2 + 957 Polysaccharide polymerization protein - none -
fig|6666666.229930.peg.557 CDS AEJP02000010.1 76949 77200 2 + 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229930.peg.558 CDS AEJP02000010.1 77197 77451 1 + 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229930.peg.559 CDS AEJP02000011.1 1705 470 -1 - 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.560 CDS AEJP02000011.1 3048 1708 -3 - 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.561 CDS AEJP02000011.1 3130 3267 1 + 138 hypothetical protein - none -
fig|6666666.229930.peg.562 CDS AEJP02000011.1 3394 3278 -1 - 117 hypothetical protein - none -
fig|6666666.229930.peg.563 CDS AEJP02000011.1 3715 3404 -1 - 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229930.peg.564 CDS AEJP02000011.1 3819 4412 3 + 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229930.peg.565 CDS AEJP02000011.1 4518 4393 -3 - 126 hypothetical protein - none -
fig|6666666.229930.peg.566 CDS AEJP02000011.1 5992 4913 -1 - 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229930.peg.567 CDS AEJP02000011.1 6273 5995 -3 - 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229930.peg.568 CDS AEJP02000011.1 7441 6251 -1 - 1191 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229930.peg.569 CDS AEJP02000011.1 7607 8374 2 + 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229930.peg.570 CDS AEJP02000011.1 8477 8746 2 + 270 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229930.peg.571 CDS AEJP02000011.1 8965 9963 1 + 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229930.peg.572 CDS AEJP02000011.1 10044 11564 3 + 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229930.peg.573 CDS AEJP02000011.1 11580 12638 3 + 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229930.peg.574 CDS AEJP02000011.1 13399 12659 -1 - 741 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229930.peg.575 CDS AEJP02000011.1 13627 13403 -1 - 225 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229930.peg.576 CDS AEJP02000011.1 14506 13631 -1 - 876 DnaJ-like protein DjlA - none -
fig|6666666.229930.peg.577 CDS AEJP02000011.1 15232 14588 -1 - 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229930.peg.578 CDS AEJP02000011.1 15958 15242 -1 - 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229930.peg.579 CDS AEJP02000011.1 16076 16939 2 + 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229930.peg.580 CDS AEJP02000011.1 16967 17854 2 + 888 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229930.peg.581 CDS AEJP02000011.1 17973 18362 3 + 390 Patatin-like phospholipase - none -
fig|6666666.229930.peg.582 CDS AEJP02000011.1 18437 19159 2 + 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229930.peg.583 CDS AEJP02000011.1 19314 20162 3 + 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229930.peg.584 CDS AEJP02000011.1 20459 21145 2 + 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229930.peg.585 CDS AEJP02000011.1 21147 22463 3 + 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229930.peg.586 CDS AEJP02000011.1 22473 24704 3 + 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229930.peg.587 CDS AEJP02000011.1 24729 25085 3 + 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229930.peg.588 CDS AEJP02000012.1 1978 506 -1 - 1473 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229930.peg.589 CDS AEJP02000012.1 3347 2028 -2 - 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229930.peg.590 CDS AEJP02000012.1 3605 4603 2 + 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229930.peg.591 CDS AEJP02000012.1 4663 6174 1 + 1512 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229930.peg.592 CDS AEJP02000012.1 6178 7305 1 + 1128 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229930.peg.593 CDS AEJP02000012.1 7394 8590 2 + 1197 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229930.peg.594 CDS AEJP02000012.1 8643 9989 3 + 1347 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229930.peg.595 CDS AEJP02000012.1 10115 9993 -2 - 123 hypothetical protein - none -
fig|6666666.229930.peg.596 CDS AEJP02000012.1 10104 11276 3 + 1173 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229930.peg.597 CDS AEJP02000012.1 12760 11303 -1 - 1458 Permeases of the major facilitator superfamily - none -
fig|6666666.229930.peg.598 CDS AEJP02000012.1 12897 12781 -3 - 117 hypothetical protein - none -
fig|6666666.229930.peg.599 CDS AEJP02000012.1 13046 14044 2 + 999 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229930.peg.600 CDS AEJP02000012.1 14056 14859 1 + 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229930.peg.601 CDS AEJP02000012.1 14968 15711 1 + 744 PTS system, mannose-specific IID component - none -
fig|6666666.229930.peg.602 CDS AEJP02000012.1 17496 15892 -3 - 1605 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229930.peg.603 CDS AEJP02000012.1 18726 17596 -3 - 1131 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229930.peg.604 CDS AEJP02000012.1 19924 18935 -1 - 990 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229930.peg.605 CDS AEJP02000012.1 20755 19973 -1 - 783 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229930.peg.606 CDS AEJP02000012.1 22949 20820 -2 - 2130 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229930.peg.607 CDS AEJP02000012.1 23250 23098 -3 - 153 hypothetical protein - none -
fig|6666666.229930.peg.608 CDS AEJP02000012.1 23255 24301 2 + 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229930.peg.609 CDS AEJP02000012.1 24790 24362 -1 - 429 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.229930.peg.610 CDS AEJP02000012.1 26205 24832 -3 - 1374 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229930.peg.611 CDS AEJP02000012.1 27091 26222 -1 - 870 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229930.peg.612 CDS AEJP02000012.1 28648 27107 -1 - 1542 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229930.peg.613 CDS AEJP02000012.1 29209 28661 -1 - 549 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229930.peg.614 CDS AEJP02000012.1 29693 29223 -2 - 471 ATP synthase F0 sector subunit b - none -
fig|6666666.229930.peg.615 CDS AEJP02000012.1 29997 29743 -3 - 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) - none -
fig|6666666.229930.peg.616 CDS AEJP02000012.1 30839 30051 -2 - 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229930.peg.617 CDS AEJP02000012.1 31241 30864 -2 - 378 FIG048548: ATP synthase protein I2 - none -
fig|6666666.229930.peg.618 CDS AEJP02000012.1 32036 31353 -2 - 684 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229930.peg.619 CDS AEJP02000012.1 32391 32029 -3 - 363 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229930.peg.620 CDS AEJP02000012.1 32642 33400 2 + 759 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229930.peg.621 CDS AEJP02000012.1 35561 33672 -2 - 1890 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229930.peg.622 CDS AEJP02000012.1 36447 36004 -3 - 444 Flavoprotein MioC Flavodoxin
fig|6666666.229930.peg.623 CDS AEJP02000012.1 36722 36504 -2 - 219 FIG074102: hypothetical protein - none -
fig|6666666.229930.peg.624 CDS AEJP02000012.1 36918 37931 3 + 1014 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229930.peg.625 CDS AEJP02000012.1 39369 38572 -3 - 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229930.peg.626 CDS AEJP02000012.1 40385 39372 -2 - 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.627 CDS AEJP02000012.1 40975 40463 -1 - 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229930.peg.628 CDS AEJP02000012.1 41413 40991 -1 - 423 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229930.peg.629 CDS AEJP02000012.1 41759 43081 2 + 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229930.peg.630 CDS AEJP02000012.1 43250 44998 2 + 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229930.peg.631 CDS AEJP02000012.1 45015 46649 3 + 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229930.peg.632 CDS AEJP02000012.1 47381 46761 -2 - 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229930.peg.633 CDS AEJP02000012.1 48292 47393 -1 - 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229930.peg.634 CDS AEJP02000012.1 48451 49179 1 + 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229930.peg.635 CDS AEJP02000012.1 49455 49240 -3 - 216 Protein SlyX - none -
fig|6666666.229930.peg.636 CDS AEJP02000012.1 49550 50275 2 + 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229930.peg.637 CDS AEJP02000012.1 50355 51023 3 + 669 YheO-like PAS domain - none -
fig|6666666.229930.peg.638 CDS AEJP02000012.1 51027 51404 3 + 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229930.peg.639 CDS AEJP02000012.1 51401 51763 2 + 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229930.peg.640 CDS AEJP02000012.1 51766 52053 1 + 288 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229930.peg.641 CDS AEJP02000012.1 52825 52058 -1 - 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229930.peg.642 CDS AEJP02000012.1 53473 52835 -1 - 639 ABC-type amino acid transport system, permease component - none -
fig|6666666.229930.peg.643 CDS AEJP02000012.1 54320 53541 -2 - 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229930.peg.644 CDS AEJP02000012.1 55741 54446 -1 - 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229930.peg.645 CDS AEJP02000012.1 57230 55866 -2 - 1365 lipoprotein, putative - none -
fig|6666666.229930.peg.646 CDS AEJP02000012.1 57938 59062 2 + 1125 RelA/SpoT domain protein - none -
fig|6666666.229930.peg.647 CDS AEJP02000012.1 60088 59174 -1 - 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229930.peg.648 CDS AEJP02000012.1 61215 60085 -3 - 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229930.peg.649 CDS AEJP02000012.1 61301 62671 2 + 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229930.peg.650 CDS AEJP02000012.1 63914 62823 -2 - 1092 Putative exported protein precursor - none -
fig|6666666.229930.peg.651 CDS AEJP02000012.1 64801 64052 -1 - 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229930.peg.652 CDS AEJP02000012.1 65500 64829 -1 - 672 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229930.peg.653 CDS AEJP02000012.1 68332 66890 -1 - 1443 Putative uncharacterized protein ydbH - none -
fig|6666666.229930.peg.654 CDS AEJP02000012.1 69055 68438 -1 - 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229930.peg.655 CDS AEJP02000012.1 69136 70623 1 + 1488 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229930.peg.656 CDS AEJP02000012.1 70595 71059 2 + 465 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229930.peg.657 CDS AEJP02000012.1 71207 72265 2 + 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229930.peg.658 CDS AEJP02000012.1 72347 72805 2 + 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229930.peg.659 CDS AEJP02000012.1 72882 73271 3 + 390 Endoribonuclease L-PSP - none -
fig|6666666.229930.peg.660 CDS AEJP02000012.1 75340 73343 -1 - 1998 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229930.peg.661 CDS AEJP02000012.1 76426 75473 -1 - 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229930.peg.662 CDS AEJP02000013.1 1497 544 -3 - 954 Glycosyltransferase - none -
fig|6666666.229930.peg.663 CDS AEJP02000013.1 2531 1641 -2 - 891 hypothetical protein - none -
fig|6666666.229930.peg.664 CDS AEJP02000013.1 4579 2534 -1 - 2046 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229930.peg.665 CDS AEJP02000013.1 5223 4612 -3 - 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229930.peg.666 CDS AEJP02000013.1 6201 5245 -3 - 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229930.peg.667 CDS AEJP02000013.1 7084 6317 -1 - 768 Putative membrane protein YfcA - none -
fig|6666666.229930.peg.668 CDS AEJP02000013.1 7960 7088 -1 - 873 Murein endopeptidase - none -
fig|6666666.229930.peg.669 CDS AEJP02000013.1 9055 7982 -1 - 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229930.peg.670 CDS AEJP02000013.1 12400 9077 -1 - 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229930.peg.671 CDS AEJP02000013.1 13824 12409 -3 - 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229930.peg.672 CDS AEJP02000013.1 14447 13830 -2 - 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229930.peg.673 CDS AEJP02000013.1 14534 15334 2 + 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229930.peg.674 CDS AEJP02000013.1 15754 16278 1 + 525 Flavodoxin 1 Flavodoxin
fig|6666666.229930.peg.675 CDS AEJP02000013.1 16297 16737 1 + 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229930.peg.676 CDS AEJP02000013.1 16905 19568 3 + 2664 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229930.peg.677 CDS AEJP02000013.1 19636 19986 1 + 351 FIG00782386: hypothetical protein - none -
fig|6666666.229930.peg.678 CDS AEJP02000013.1 20322 20020 -3 - 303 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229930.peg.679 CDS AEJP02000013.1 21035 20343 -2 - 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229930.peg.680 CDS AEJP02000013.1 22255 21065 -1 - 1191 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229930.peg.681 CDS AEJP02000013.1 22551 22255 -3 - 297 Inner membrane protein yciS - none -
fig|6666666.229930.peg.682 CDS AEJP02000013.1 22937 22650 -2 - 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229930.peg.683 CDS AEJP02000013.1 24645 22999 -3 - 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229930.peg.684 CDS AEJP02000013.1 25420 24743 -1 - 678 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229930.peg.685 CDS AEJP02000013.1 26306 25413 -2 - 894 Membrane protein LAPB - none -
fig|6666666.229930.peg.686 CDS AEJP02000013.1 26599 28965 1 + 2367 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229930.peg.687 CDS AEJP02000013.1 29043 31817 3 + 2775 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229930.peg.688 CDS AEJP02000013.1 32216 31884 -2 - 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229930.peg.689 CDS AEJP02000013.1 32945 32217 -2 - 729 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229930.peg.690 CDS AEJP02000013.1 33882 32950 -3 - 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229930.peg.691 CDS AEJP02000013.1 34182 36455 3 + 2274 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229930.peg.692 CDS AEJP02000013.1 38811 36886 -3 - 1926 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229930.peg.693 CDS AEJP02000013.1 39262 38798 -1 - 465 FIG074102: hypothetical protein - none -
fig|6666666.229930.peg.694 CDS AEJP02000013.1 39708 39262 -3 - 447 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229930.peg.695 CDS AEJP02000013.1 39984 39805 -3 - 180 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229930.peg.696 CDS AEJP02000015.1 656 153 -2 - 504 Mercuric resistance operon regulatory protein - none -
fig|6666666.229930.peg.697 CDS AEJP02000015.1 995 684 -2 - 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229930.peg.698 CDS AEJP02000015.1 1087 1404 1 + 318 hypothetical protein - none -
fig|6666666.229930.peg.699 CDS AEJP02000015.1 1414 4176 1 + 2763 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229930.peg.700 CDS AEJP02000015.1 4253 4657 2 + 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229930.peg.701 CDS AEJP02000015.1 6183 5149 -3 - 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229930.peg.702 CDS AEJP02000015.1 6686 6183 -2 - 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229930.peg.703 CDS AEJP02000015.1 6675 6803 3 + 129 hypothetical protein - none -
fig|6666666.229930.peg.704 CDS AEJP02000015.1 9416 6828 -2 - 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229930.peg.705 CDS AEJP02000015.1 9564 9394 -3 - 171 hypothetical protein - none -
fig|6666666.229930.peg.706 CDS AEJP02000015.1 9652 9536 -1 - 117 hypothetical protein - none -
fig|6666666.229930.peg.707 CDS AEJP02000015.1 10164 9607 -3 - 558 FIG00696423: hypothetical protein - none -
fig|6666666.229930.peg.708 CDS AEJP02000015.1 10485 10192 -3 - 294 nucleotidyltransferase - none -
fig|6666666.229930.peg.709 CDS AEJP02000015.1 10888 10469 -1 - 420 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229930.peg.710 CDS AEJP02000015.1 11806 10979 -1 - 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229930.peg.711 CDS AEJP02000015.1 12685 11822 -1 - 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229930.peg.712 CDS AEJP02000015.1 13695 12763 -3 - 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229930.peg.713 CDS AEJP02000015.1 14296 13760 -1 - 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229930.peg.714 CDS AEJP02000015.1 14845 14435 -1 - 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229930.peg.715 CDS AEJP02000015.1 14958 15569 3 + 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229930.peg.716 CDS AEJP02000015.1 15593 16960 2 + 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229930.peg.717 CDS AEJP02000015.1 16929 17189 3 + 261 hypothetical protein - none -
fig|6666666.229930.peg.718 CDS AEJP02000015.1 17182 17931 1 + 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229930.peg.719 CDS AEJP02000015.1 18176 18045 -2 - 132 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229930.peg.720 CDS AEJP02000015.1 18452 18180 -2 - 273 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229930.peg.721 CDS AEJP02000015.1 18590 19714 2 + 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229930.peg.722 CDS AEJP02000015.1 19729 20559 1 + 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229930.peg.723 CDS AEJP02000015.1 20912 21046 2 + 135 hypothetical protein - none -
fig|6666666.229930.peg.724 CDS AEJP02000015.1 22577 21198 -2 - 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229930.peg.725 CDS AEJP02000015.1 22731 23525 3 + 795 FIG001154: CcsA-related protein - none -
fig|6666666.229930.peg.726 CDS AEJP02000015.1 23600 24862 2 + 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229930.peg.727 CDS AEJP02000015.1 25036 25506 1 + 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229930.peg.728 CDS AEJP02000015.1 25510 25956 1 + 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229930.peg.729 CDS AEJP02000015.1 25966 26724 1 + 759 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229930.peg.730 CDS AEJP02000015.1 27582 27836 3 + 255 hypothetical protein - none -
fig|6666666.229930.peg.731 CDS AEJP02000015.1 28016 28147 2 + 132 hypothetical protein - none -
fig|6666666.229930.peg.732 CDS AEJP02000015.1 28165 28344 1 + 180 hypothetical protein - none -
fig|6666666.229930.peg.733 CDS AEJP02000015.1 28325 29137 2 + 813 cell filamentation-like protein - none -
fig|6666666.229930.peg.734 CDS AEJP02000015.1 29112 29261 3 + 150 hypothetical protein - none -
fig|6666666.229930.peg.735 CDS AEJP02000015.1 29491 29676 1 + 186 hypothetical protein - none -
fig|6666666.229930.peg.736 CDS AEJP02000015.1 30173 30322 2 + 150 hypothetical protein - none -
fig|6666666.229930.peg.737 CDS AEJP02000015.1 31107 31247 3 + 141 hypothetical protein - none -
fig|6666666.229930.peg.738 CDS AEJP02000015.1 31382 31669 2 + 288 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229930.peg.739 CDS AEJP02000015.1 31666 33357 1 + 1692 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.5.3) - none -
fig|6666666.229930.peg.740 CDS AEJP02000015.1 33368 33985 2 + 618 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3) - none -
fig|6666666.229930.peg.741 CDS AEJP02000015.1 33987 34826 3 + 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.5.3) - none -
fig|6666666.229930.peg.742 CDS AEJP02000015.1 34874 35488 2 + 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229930.peg.743 CDS AEJP02000015.1 35502 35663 3 + 162 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229930.peg.744 CDS AEJP02000015.1 35855 36760 2 + 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229930.peg.745 CDS AEJP02000015.1 36810 37070 3 + 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229930.peg.746 CDS AEJP02000015.1 37237 37527 1 + 291 ISSo9, nucleotidyltransferase domain protein - none -
fig|6666666.229930.peg.747 CDS AEJP02000015.1 37618 38322 1 + 705 hypothetical protein - none -
fig|6666666.229930.peg.748 CDS AEJP02000015.1 38404 40485 1 + 2082 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229930.peg.749 CDS AEJP02000015.1 41719 40697 -1 - 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229930.peg.750 CDS AEJP02000015.1 42502 41738 -1 - 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229930.peg.751 CDS AEJP02000015.1 43202 42540 -2 - 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229930.peg.752 CDS AEJP02000015.1 43430 43206 -2 - 225 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229930.peg.753 CDS AEJP02000015.1 44705 43833 -2 - 873 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229930.peg.754 CDS AEJP02000015.1 45189 44773 -3 - 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229930.peg.755 CDS AEJP02000015.1 45624 45202 -3 - 423 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229930.peg.756 CDS AEJP02000015.1 45861 45640 -3 - 222 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229930.peg.757 CDS AEJP02000015.1 45942 46490 3 + 549 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229930.peg.758 CDS AEJP02000015.1 47376 46495 -3 - 882 Transcriptional regulator, AraC family - none -
fig|6666666.229930.peg.759 CDS AEJP02000015.1 48073 47447 -1 - 627 membrane protein ykgB - none -
fig|6666666.229930.peg.760 CDS AEJP02000015.1 48442 50448 1 + 2007 oligopeptide transporter - none -
fig|6666666.229930.peg.761 CDS AEJP02000015.1 50510 50938 2 + 429 hypothetical protein - none -
fig|6666666.229930.peg.762 CDS AEJP02000015.1 50976 51785 3 + 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229930.peg.763 CDS AEJP02000015.1 51867 53351 3 + 1485 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229930.peg.764 CDS AEJP02000015.1 53604 54302 3 + 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229930.peg.765 CDS AEJP02000015.1 55032 55649 3 + 618 Aspartate racemase (EC 5.1.1.13) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229930.peg.766 CDS AEJP02000015.1 55662 55916 3 + 255 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229930.peg.767 CDS AEJP02000015.1 55996 56454 1 + 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229930.peg.768 CDS AEJP02000015.1 56989 56843 -1 - 147 hypothetical protein - none -
fig|6666666.229930.peg.769 CDS AEJP02000015.1 57010 58464 1 + 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229930.peg.770 CDS AEJP02000015.1 60119 58875 -2 - 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.771 CDS AEJP02000015.1 60867 60139 -3 - 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.772 CDS AEJP02000015.1 61360 60917 -1 - 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.773 CDS AEJP02000015.1 62576 61353 -2 - 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.774 CDS AEJP02000015.1 63064 62585 -1 - 480 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.775 CDS AEJP02000015.1 65467 63194 -1 - 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.776 CDS AEJP02000015.1 66058 65474 -1 - 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.777 CDS AEJP02000015.1 66501 66055 -3 - 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.778 CDS AEJP02000015.1 67424 66498 -2 - 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.779 CDS AEJP02000015.1 68143 67421 -1 - 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.780 CDS AEJP02000015.1 69504 68143 -3 - 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.781 CDS AEJP02000015.1 70046 69501 -2 - 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.782 CDS AEJP02000015.1 71738 70071 -2 - 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.783 CDS AEJP02000015.1 71989 71738 -1 - 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.784 CDS AEJP02000015.1 72255 71992 -3 - 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.785 CDS AEJP02000015.1 73021 72233 -1 - 789 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.786 CDS AEJP02000015.1 73749 73006 -3 - 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229930.peg.787 CDS AEJP02000015.1 74102 73779 -2 - 324 hypothetical protein - none -
fig|6666666.229930.peg.788 CDS AEJP02000015.1 74130 74555 3 + 426 Excinuclease ATPase subunit - none -
fig|6666666.229930.peg.789 CDS AEJP02000015.1 75369 74656 -3 - 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229930.peg.790 CDS AEJP02000015.1 76273 75383 -1 - 891 Tyrosine recombinase XerC - none -
fig|6666666.229930.peg.791 CDS AEJP02000015.1 77107 76283 -1 - 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229930.peg.792 CDS AEJP02000015.1 77365 77186 -1 - 180 hypothetical protein - none -
fig|6666666.229930.peg.793 CDS AEJP02000015.1 78393 77365 -3 - 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229930.peg.794 CDS AEJP02000015.1 78576 79076 3 + 501 hypothetical protein - none -
fig|6666666.229930.peg.795 CDS AEJP02000015.1 79049 79168 2 + 120 hypothetical protein - none -
fig|6666666.229930.peg.796 CDS AEJP02000015.1 81748 79178 -1 - 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229930.peg.797 CDS AEJP02000015.1 82013 82594 2 + 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229930.peg.798 CDS AEJP02000015.1 83779 82667 -1 - 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229930.peg.799 CDS AEJP02000015.1 84775 83963 -1 - 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229930.peg.800 CDS AEJP02000015.1 84802 84924 1 + 123 hypothetical protein - none -
fig|6666666.229930.peg.801 CDS AEJP02000015.1 84921 85607 3 + 687 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.229930.peg.802 CDS AEJP02000015.1 85724 86308 2 + 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229930.peg.803 CDS AEJP02000015.1 86656 86495 -1 - 162 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Riboflavin synthesis cluster
fig|6666666.229930.peg.804 CDS AEJP02000015.1 88220 86805 -2 - 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229930.peg.805 CDS AEJP02000015.1 88334 89968 2 + 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229930.peg.806 CDS AEJP02000016.1 10 171 1 + 162 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229930.peg.807 CDS AEJP02000016.1 182 772 2 + 591 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229930.peg.808 CDS AEJP02000016.1 846 1238 3 + 393 putative - none -
fig|6666666.229930.peg.809 CDS AEJP02000016.1 1250 2251 2 + 1002 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229930.peg.810 CDS AEJP02000016.1 2346 2624 3 + 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229930.peg.811 CDS AEJP02000016.1 2634 2912 3 + 279 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229930.peg.812 CDS AEJP02000016.1 2921 4351 2 + 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229930.peg.813 CDS AEJP02000016.1 4490 4657 2 + 168 hypothetical protein - none -
fig|6666666.229930.peg.814 CDS AEJP02000016.1 4806 5081 3 + 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229930.peg.815 CDS AEJP02000016.1 6106 6372 1 + 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229930.peg.816 CDS AEJP02000016.1 6388 8184 1 + 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229930.peg.817 CDS AEJP02000016.1 8195 9499 2 + 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229930.peg.818 CDS AEJP02000016.1 9567 9698 3 + 132 hypothetical protein - none -
fig|6666666.229930.peg.819 CDS AEJP02000016.1 11690 9903 -2 - 1788 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229930.peg.820 CDS AEJP02000016.1 12409 12152 -1 - 258 hypothetical protein - none -
fig|6666666.229930.peg.821 CDS AEJP02000016.1 12954 12685 -3 - 270 hypothetical protein - none -
fig|6666666.229930.peg.822 CDS AEJP02000016.1 13431 13186 -3 - 246 hypothetical protein - none -
fig|6666666.229930.peg.823 CDS AEJP02000016.1 13803 13501 -3 - 303 hypothetical protein - none -
fig|6666666.229930.peg.824 CDS AEJP02000016.1 14686 13841 -1 - 846 transposase - none -
fig|6666666.229930.peg.825 CDS AEJP02000016.1 15008 14730 -2 - 279 possible DNA-binding protein - none -
fig|6666666.229930.peg.826 CDS AEJP02000016.1 15223 15909 1 + 687 probable transcription regulator - none -
fig|6666666.229930.peg.827 CDS AEJP02000016.1 16044 15928 -3 - 117 hypothetical protein - none -
fig|6666666.229930.peg.828 CDS AEJP02000016.1 16691 16122 -2 - 570 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229930.peg.829 CDS AEJP02000016.1 17409 17197 -3 - 213 hypothetical protein - none -
fig|6666666.229930.peg.830 CDS AEJP02000016.1 17436 18134 3 + 699 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229930.peg.831 CDS AEJP02000016.1 18144 19337 3 + 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229930.peg.832 CDS AEJP02000016.1 19340 20146 2 + 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229930.peg.833 CDS AEJP02000016.1 20421 22106 3 + 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229930.peg.834 CDS AEJP02000016.1 22239 23228 3 + 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229930.peg.835 CDS AEJP02000016.1 23514 24920 3 + 1407 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229930.peg.836 CDS AEJP02000016.1 25326 25024 -3 - 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229930.peg.837 CDS AEJP02000016.1 25982 25359 -2 - 624 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229930.peg.838 CDS AEJP02000016.1 26233 25982 -1 - 252 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229930.peg.839 CDS AEJP02000016.1 27072 26257 -3 - 816 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229930.peg.840 CDS AEJP02000017.1 714 457 -3 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229930.peg.841 CDS AEJP02000017.1 905 714 -2 - 192 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.229930.peg.842 CDS AEJP02000017.1 1315 905 -1 - 411 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.229930.peg.843 CDS AEJP02000017.1 2036 1329 -2 - 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229930.peg.844 CDS AEJP02000017.1 2385 2053 -3 - 333 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.229930.peg.845 CDS AEJP02000017.1 2605 2396 -1 - 210 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229930.peg.846 CDS AEJP02000017.1 3518 2697 -2 - 822 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.229930.peg.847 CDS AEJP02000017.1 3841 3539 -1 - 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.229930.peg.848 CDS AEJP02000017.1 4440 3838 -3 - 603 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.229930.peg.849 CDS AEJP02000017.1 5082 4456 -3 - 627 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.229930.peg.850 CDS AEJP02000017.1 5410 5099 -1 - 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229930.peg.851 CDS AEJP02000017.1 6556 5660 -1 - 897 Transcriptional regulators, LysR family - none -
fig|6666666.229930.peg.852 CDS AEJP02000017.1 6893 7312 2 + 420 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229930.peg.853 CDS AEJP02000017.1 7287 7484 3 + 198 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229930.peg.854 CDS AEJP02000017.1 7496 8161 2 + 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229930.peg.855 CDS AEJP02000017.1 8164 9507 1 + 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229930.peg.856 CDS AEJP02000017.1 9525 10706 3 + 1182 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.229930.peg.857 CDS AEJP02000017.1 11271 10804 -3 - 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229930.peg.858 CDS AEJP02000017.1 12747 11362 -3 - 1386 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229930.peg.859 CDS AEJP02000017.1 13940 13008 -2 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229930.peg.860 CDS AEJP02000017.1 14954 13950 -2 - 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229930.peg.861 CDS AEJP02000017.1 15197 16588 2 + 1392 Chloride channel protein - none -
fig|6666666.229930.peg.862 CDS AEJP02000017.1 16591 17574 1 + 984 tRNA dihydrouridine synthase A - none -
fig|6666666.229930.peg.863 CDS AEJP02000017.1 18622 17630 -1 - 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229930.peg.864 CDS AEJP02000017.1 18788 19240 2 + 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229930.peg.865 CDS AEJP02000017.1 19274 20032 2 + 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229930.peg.866 CDS AEJP02000017.1 21230 20169 -2 - 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229930.peg.867 CDS AEJP02000017.1 21304 21654 1 + 351 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229930.peg.868 CDS AEJP02000017.1 22120 21758 -1 - 363 FIG00696564: hypothetical protein - none -
fig|6666666.229930.peg.869 CDS AEJP02000017.1 22355 22071 -2 - 285 hypothetical protein - none -
fig|6666666.229930.peg.870 CDS AEJP02000017.1 22564 23895 1 + 1332 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229930.peg.871 CDS AEJP02000017.1 24020 24424 2 + 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229930.peg.872 CDS AEJP02000017.1 24551 24769 2 + 219 hypothetical protein - none -
fig|6666666.229930.peg.873 CDS AEJP02000017.1 25437 24841 -3 - 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229930.peg.874 CDS AEJP02000017.1 26251 25532 -1 - 720 probable periplasmic protein NMA1059 - none -
fig|6666666.229930.peg.875 CDS AEJP02000017.1 26736 26302 -3 - 435 Ribonuclease E inhibitor RraB RNA processing and degradation, bacterial
fig|6666666.229930.peg.876 CDS AEJP02000017.1 27226 26831 -1 - 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229930.peg.877 CDS AEJP02000017.1 28712 27336 -2 - 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229930.peg.878 CDS AEJP02000017.1 30091 28736 -1 - 1356 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.229930.peg.879 CDS AEJP02000017.1 31047 30091 -3 - 957 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229930.peg.880 CDS AEJP02000017.1 31625 31113 -2 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229930.peg.881 CDS AEJP02000018.1 81 200 3 + 120 FIG00697497: hypothetical protein - none -
fig|6666666.229930.peg.882 CDS AEJP02000018.1 493 236 -1 - 258 FIG00699498: hypothetical protein - none -
fig|6666666.229930.peg.883 CDS AEJP02000018.1 1328 2314 2 + 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229930.peg.884 CDS AEJP02000018.1 3011 2298 -2 - 714 SanA protein - none -
fig|6666666.229930.peg.885 CDS AEJP02000018.1 3204 4307 3 + 1104 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229930.peg.886 CDS AEJP02000018.1 4613 5611 2 + 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229930.peg.887 CDS AEJP02000018.1 5914 6048 1 + 135 hypothetical protein - none -
fig|6666666.229930.peg.888 CDS AEJP02000018.1 6082 6402 1 + 321 putative cytoplasmic protein - none -
fig|6666666.229930.peg.889 CDS AEJP02000018.1 7344 6517 -3 - 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229930.peg.890 CDS AEJP02000018.1 8400 7429 -3 - 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229930.peg.891 CDS AEJP02000018.1 9399 8431 -3 - 969 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229930.peg.892 CDS AEJP02000018.1 10077 9454 -3 - 624 Hypothetical YciO protein, TsaC/YrdC paralog YrdC-YciO-Sua5 protein family
fig|6666666.229930.peg.893 CDS AEJP02000018.1 10969 10151 -1 - 819 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229930.peg.894 CDS AEJP02000018.1 11088 10924 -3 - 165 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229930.peg.895 CDS AEJP02000018.1 11273 11067 -2 - 207 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229930.peg.896 CDS AEJP02000018.1 13194 11314 -3 - 1881 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229930.peg.897 CDS AEJP02000018.1 13318 13872 1 + 555 FIG002003: Protein YdjA - none -
fig|6666666.229930.peg.898 CDS AEJP02000018.1 15781 14300 -1 - 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229930.peg.899 CDS AEJP02000018.1 17488 15818 -1 - 1671 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229930.peg.900 CDS AEJP02000018.1 20174 17517 -2 - 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229930.peg.901 CDS AEJP02000018.1 20552 21427 2 + 876 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229930.peg.902 CDS AEJP02000018.1 24294 21580 -3 - 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229930.peg.903 CDS AEJP02000018.1 24467 26857 2 + 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229930.peg.904 CDS AEJP02000018.1 26967 29042 3 + 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229930.peg.905 CDS AEJP02000018.1 29064 29189 3 + 126 hypothetical protein - none -
fig|6666666.229930.peg.906 CDS AEJP02000018.1 29728 29186 -1 - 543 Colicin V production protein - none -
fig|6666666.229930.peg.907 CDS AEJP02000018.1 30350 29907 -2 - 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229930.peg.908 CDS AEJP02000018.1 30618 31820 3 + 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229930.peg.909 CDS AEJP02000018.1 31890 34025 3 + 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229930.peg.910 CDS AEJP02000018.1 34372 34506 1 + 135 hypothetical protein - none -
fig|6666666.229930.peg.911 CDS AEJP02000018.1 34587 34733 3 + 147 hypothetical protein - none -
fig|6666666.229930.peg.912 CDS AEJP02000018.1 35304 34804 -3 - 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229930.peg.913 CDS AEJP02000018.1 36763 35297 -1 - 1467 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229930.peg.914 CDS AEJP02000018.1 37317 36880 -3 - 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229930.peg.915 CDS AEJP02000018.1 37810 40044 1 + 2235 DNA internalization-related competence protein ComEC/Rec2 KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229930.peg.916 CDS AEJP02000018.1 40091 41839 2 + 1749 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229930.peg.917 CDS AEJP02000018.1 41858 42832 2 + 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229930.peg.918 CDS AEJP02000018.1 42854 43033 2 + 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229930.peg.919 CDS AEJP02000018.1 43035 43808 3 + 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229930.peg.920 CDS AEJP02000018.1 43947 45776 3 + 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229930.peg.921 CDS AEJP02000018.1 47185 46163 -1 - 1023 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229930.peg.922 CDS AEJP02000018.1 47936 47157 -2 - 780 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229930.peg.923 CDS AEJP02000018.1 48802 47933 -1 - 870 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229930.peg.924 CDS AEJP02000018.1 49752 48799 -3 - 954 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229930.peg.925 CDS AEJP02000018.1 51216 50107 -3 - 1110 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229930.peg.926 CDS AEJP02000018.1 52576 51728 -1 - 849 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229930.peg.927 CDS AEJP02000018.1 53044 53205 1 + 162 hypothetical protein - none -
fig|6666666.229930.peg.928 CDS AEJP02000018.1 53331 53176 -3 - 156 hypothetical protein - none -
fig|6666666.229930.peg.929 CDS AEJP02000018.1 53572 53420 -1 - 153 hypothetical protein - none -
fig|6666666.229930.peg.930 CDS AEJP02000018.1 55013 53589 -2 - 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229930.peg.931 CDS AEJP02000018.1 56559 55024 -3 - 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229930.peg.932 CDS AEJP02000018.1 56852 57577 2 + 726 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229930.peg.933 CDS AEJP02000018.1 57825 59012 3 + 1188 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229930.peg.934 CDS AEJP02000018.1 59139 59750 3 + 612 hypothetical protein - none -
fig|6666666.229930.peg.935 CDS AEJP02000018.1 59849 59995 2 + 147 hypothetical protein - none -
fig|6666666.229930.peg.936 CDS AEJP02000018.1 60954 60037 -3 - 918 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229930.peg.937 CDS AEJP02000018.1 61340 60954 -2 - 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229930.peg.938 CDS AEJP02000018.1 62773 61427 -1 - 1347 helicase domain protein - none -
fig|6666666.229930.peg.939 CDS AEJP02000018.1 65019 62803 -3 - 2217 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229930.peg.940 CDS AEJP02000018.1 67806 65314 -3 - 2493 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229930.peg.941 CDS AEJP02000018.1 69318 67822 -3 - 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229930.peg.942 CDS AEJP02000018.1 69797 69342 -2 - 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229930.peg.943 CDS AEJP02000018.1 70236 71588 3 + 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229930.peg.944 CDS AEJP02000018.1 71618 71803 2 + 186 hypothetical protein - none -
fig|6666666.229930.peg.945 CDS AEJP02000018.1 71843 72115 2 + 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229930.peg.946 CDS AEJP02000018.1 72127 72393 1 + 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229930.peg.947 CDS AEJP02000018.1 72425 73984 2 + 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229930.peg.948 CDS AEJP02000018.1 74175 74990 3 + 816 Integrase - none -
fig|6666666.229930.peg.949 CDS AEJP02000018.1 74980 75093 1 + 114 hypothetical protein - none -
fig|6666666.229930.peg.950 CDS AEJP02000018.1 76469 75156 -2 - 1314 UPF0325 protein YaeH - none -
fig|6666666.229930.peg.951 CDS AEJP02000018.1 76724 76906 2 + 183 hypothetical protein - none -
fig|6666666.229930.peg.952 CDS AEJP02000018.1 76958 77377 2 + 420 hypothetical protein - none -
fig|6666666.229930.peg.953 CDS AEJP02000018.1 77762 77403 -2 - 360 phage-related protein - none -
fig|6666666.229930.peg.954 CDS AEJP02000018.1 78608 78426 -2 - 183 putative minor head protein - none -
fig|6666666.229930.peg.955 CDS AEJP02000018.1 79263 79928 3 + 666 putative prophage repressor CI - none -
fig|6666666.229930.peg.956 CDS AEJP02000018.1 80019 80636 3 + 618 hypothetical protein - none -
fig|6666666.229930.peg.957 CDS AEJP02000018.1 81231 81887 3 + 657 hypothetical protein - none -
fig|6666666.229930.peg.958 CDS AEJP02000018.1 82201 82064 -1 - 138 hypothetical protein - none -
fig|6666666.229930.peg.959 CDS AEJP02000018.1 82545 82411 -3 - 135 hypothetical protein - none -
fig|6666666.229930.peg.960 CDS AEJP02000018.1 83932 82982 -1 - 951 hypothetical protein - none -
fig|6666666.229930.peg.961 CDS AEJP02000018.1 85714 86667 1 + 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229930.peg.962 CDS AEJP02000018.1 86730 87587 3 + 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229930.peg.963 CDS AEJP02000018.1 87619 88965 1 + 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229930.peg.964 CDS AEJP02000018.1 90324 88993 -3 - 1332 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229930.peg.965 CDS AEJP02000018.1 90449 90297 -2 - 153 hypothetical protein - none -
fig|6666666.229930.peg.966 CDS AEJP02000018.1 90835 90449 -1 - 387 Integral membrane protein - none -
fig|6666666.229930.peg.967 CDS AEJP02000018.1 91029 92045 3 + 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229930.peg.968 CDS AEJP02000018.1 92051 92392 2 + 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229930.peg.969 CDS AEJP02000018.1 92507 93688 2 + 1182 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229930.peg.970 CDS AEJP02000018.1 93821 94465 2 + 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229930.peg.971 CDS AEJP02000018.1 96380 95202 -2 - 1179 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229930.peg.972 CDS AEJP02000018.1 97791 96487 -3 - 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229930.peg.973 CDS AEJP02000018.1 98677 97976 -1 - 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229930.peg.974 CDS AEJP02000018.1 98698 99396 1 + 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229930.peg.975 CDS AEJP02000018.1 100212 99454 -3 - 759 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229930.peg.976 CDS AEJP02000018.1 101377 101039 -1 - 339 FIG00904093: hypothetical protein - none -
fig|6666666.229930.peg.977 CDS AEJP02000018.1 101553 102758 3 + 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229930.peg.978 CDS AEJP02000018.1 102849 104612 3 + 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229930.peg.979 CDS AEJP02000018.1 104783 105193 2 + 411 probable membrane protein YPO3565 - none -
fig|6666666.229930.peg.980 CDS AEJP02000018.1 105321 105151 -3 - 171 hypothetical protein - none -
fig|6666666.229930.peg.981 CDS AEJP02000018.1 105384 106766 3 + 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229930.peg.982 CDS AEJP02000018.1 107868 106864 -3 - 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229930.peg.983 CDS AEJP02000018.1 108560 107913 -2 - 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229930.peg.984 CDS AEJP02000018.1 110172 108544 -3 - 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229930.peg.985 CDS AEJP02000018.1 111185 110181 -2 - 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229930.peg.986 CDS AEJP02000018.1 111607 111383 -1 - 225 Phosphomethylpyrimidine kinase (EC 2.7.4.7) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.229930.peg.987 CDS AEJP02000018.1 112532 112239 -2 - 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229930.peg.988 CDS AEJP02000018.1 113549 112536 -2 - 1014 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229930.peg.989 CDS AEJP02000018.1 115357 113603 -1 - 1755 predicted ATP-dependent endonuclease, OLD family - none -
fig|6666666.229930.peg.990 CDS AEJP02000018.1 115598 115347 -2 - 252 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229930.peg.991 CDS AEJP02000018.1 116024 115602 -2 - 423 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229930.peg.992 CDS AEJP02000018.1 116495 116268 -2 - 228 CRISPR-associated protein, Csd2/Csh2 family - none -
fig|6666666.229930.peg.993 CDS AEJP02000018.1 117715 116522 -1 - 1194 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229930.peg.994 CDS AEJP02000018.1 118395 117712 -3 - 684 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229930.peg.995 CDS AEJP02000018.1 120919 118421 -1 - 2499 CRISPR-associated protein Cas3@1@1 CRISPRs
fig|6666666.229930.peg.996 CDS AEJP02000018.1 121341 124274 3 + 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229930.peg.997 CDS AEJP02000018.1 124609 124310 -1 - 300 Putative transcriptional regulator - none -
fig|6666666.229930.peg.998 CDS AEJP02000018.1 124956 124606 -3 - 351 YPPCP.09C homologue - none -
fig|6666666.229930.peg.999 CDS AEJP02000018.1 126727 125144 -1 - 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229930.peg.1000 CDS AEJP02000018.1 127084 127911 1 + 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229930.peg.1001 CDS AEJP02000018.1 128006 129343 2 + 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229930.peg.1002 CDS AEJP02000018.1 129533 129778 2 + 246 FIG00696862: hypothetical protein - none -
fig|6666666.229930.peg.1003 CDS AEJP02000018.1 130011 131780 3 + 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229930.peg.1004 CDS AEJP02000018.1 133259 131865 -2 - 1395 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229930.peg.1005 CDS AEJP02000018.1 133347 133228 -3 - 120 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229930.peg.1006 CDS AEJP02000018.1 133948 133832 -1 - 117 FIG00697497: hypothetical protein - none -
fig|6666666.229930.peg.1007 CDS AEJP02000019.1 3 698 3 + 696 Paraquat-inducible protein B Oxidative stress
fig|6666666.229930.peg.1008 CDS AEJP02000019.1 2018 774 -2 - 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229930.peg.1009 CDS AEJP02000019.1 2282 3400 2 + 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229930.peg.1010 CDS AEJP02000019.1 3384 4244 3 + 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229930.peg.1011 CDS AEJP02000019.1 4244 5017 2 + 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229930.peg.1012 CDS AEJP02000019.1 5148 6245 3 + 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229930.peg.1013 CDS AEJP02000019.1 6367 7263 1 + 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229930.peg.1014 CDS AEJP02000019.1 7361 7248 -2 - 114 hypothetical protein - none -
fig|6666666.229930.peg.1015 CDS AEJP02000019.1 8658 7342 -3 - 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229930.peg.1016 CDS AEJP02000019.1 8966 10633 2 + 1668 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229930.peg.1017 CDS AEJP02000019.1 12470 11130 -2 - 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229930.peg.1018 CDS AEJP02000019.1 13100 12483 -2 - 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229930.peg.1019 CDS AEJP02000019.1 15937 13193 -1 - 2745 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229930.peg.1020 CDS AEJP02000019.1 16420 15941 -1 - 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229930.peg.1021 CDS AEJP02000019.1 18332 16959 -2 - 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229930.peg.1022 CDS AEJP02000019.1 19489 18335 -1 - 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229930.peg.1023 CDS AEJP02000019.1 19654 20334 1 + 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229930.peg.1024 CDS AEJP02000019.1 20360 21625 2 + 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229930.peg.1025 CDS AEJP02000019.1 21694 22305 1 + 612 SH3 domain protein - none -
fig|6666666.229930.peg.1026 CDS AEJP02000019.1 22305 23609 3 + 1305 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229930.peg.1027 CDS AEJP02000019.1 23644 24267 1 + 624 Outer membrane lipoprotein LolB precursor - none -
fig|6666666.229930.peg.1028 CDS AEJP02000019.1 24267 25178 3 + 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229930.peg.1029 CDS AEJP02000019.1 25219 26169 1 + 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229930.peg.1030 CDS AEJP02000019.1 26347 26493 1 + 147 hypothetical protein - none -
fig|6666666.229930.peg.1031 CDS AEJP02000019.1 26802 27947 3 + 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229930.peg.1032 CDS AEJP02000019.1 28190 29779 2 + 1590 L-lactate permease Lactate utilization
fig|6666666.229930.peg.1033 CDS AEJP02000019.1 30266 29934 -2 - 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229930.peg.1034 CDS AEJP02000019.1 30291 30407 3 + 117 hypothetical protein - none -
fig|6666666.229930.peg.1035 CDS AEJP02000019.1 30466 31548 1 + 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229930.peg.1036 CDS AEJP02000019.1 31575 32720 3 + 1146 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229930.peg.1037 CDS AEJP02000019.1 32731 34062 1 + 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229930.peg.1038 CDS AEJP02000019.1 34617 34150 -3 - 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229930.peg.1039 CDS AEJP02000019.1 34685 35446 2 + 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229930.peg.1040 CDS AEJP02000019.1 35898 36152 3 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229930.peg.1041 CDS AEJP02000019.1 36142 36432 1 + 291 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229930.peg.1042 CDS AEJP02000019.1 36827 36489 -2 - 339 conserved hypothetical protein - none -
fig|6666666.229930.peg.1043 CDS AEJP02000019.1 37255 37620 1 + 366 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229930.peg.1044 CDS AEJP02000019.1 37791 39179 3 + 1389 Putative protease - none -
fig|6666666.229930.peg.1045 CDS AEJP02000019.1 39476 40567 2 + 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229930.peg.1046 CDS AEJP02000019.1 41747 40611 -2 - 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229930.peg.1047 CDS AEJP02000019.1 42220 43371 1 + 1152 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229930.peg.1048 CDS AEJP02000019.1 43506 43646 3 + 141 hypothetical protein - none -
fig|6666666.229930.peg.1049 CDS AEJP02000019.1 43663 43962 1 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229930.peg.1050 CDS AEJP02000019.1 44026 45843 1 + 1818 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229930.peg.1051 CDS AEJP02000019.1 45860 46825 2 + 966 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229930.peg.1052 CDS AEJP02000019.1 47045 49672 2 + 2628 Iron siderophore receptor protein - none -
fig|6666666.229930.peg.1053 CDS AEJP02000019.1 49919 49743 -2 - 177 hypothetical protein - none -
fig|6666666.229930.peg.1054 CDS AEJP02000019.1 50022 52643 3 + 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229930.peg.1055 CDS AEJP02000019.1 53019 52726 -3 - 294 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) - none -
fig|6666666.229930.peg.1056 CDS AEJP02000019.1 53415 53257 -3 - 159 hypothetical protein - none -
fig|6666666.229930.peg.1057 CDS AEJP02000019.1 53707 53558 -1 - 150 hypothetical protein - none -
fig|6666666.229930.peg.1058 CDS AEJP02000019.1 54188 53964 -2 - 225 hypothetical protein - none -
fig|6666666.229930.peg.1059 CDS AEJP02000019.1 54634 54855 1 + 222 transcriptional regulatory protein - none -
fig|6666666.229930.peg.1060 CDS AEJP02000019.1 54865 55011 1 + 147 FIG00697497: hypothetical protein - none -
fig|6666666.229930.peg.1061 CDS AEJP02000019.1 55336 55551 1 + 216 hypothetical protein - none -
fig|6666666.229930.peg.1062 CDS AEJP02000019.1 55889 56047 2 + 159 hypothetical protein - none -
fig|6666666.229930.peg.1063 CDS AEJP02000019.1 56044 56262 1 + 219 hypothetical protein - none -
fig|6666666.229930.peg.1064 CDS AEJP02000019.1 56364 56597 3 + 234 hypothetical protein - none -
fig|6666666.229930.peg.1065 CDS AEJP02000019.1 57064 57903 1 + 840 Predicted transcriptional regulator of the myo-inositol catabolic operon - none -
fig|6666666.229930.peg.1066 CDS AEJP02000019.1 59130 57943 -3 - 1188 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain - none -
fig|6666666.229930.peg.1067 CDS AEJP02000019.1 59129 59998 2 + 870 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) - none -
fig|6666666.229930.peg.1068 CDS AEJP02000019.1 61701 60268 -3 - 1434 RTX toxin transporter, determinant D - none -
fig|6666666.229930.peg.1069 CDS AEJP02000019.1 63839 61716 -2 - 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229930.peg.1070 CDS AEJP02000019.1 67075 63908 -1 - 3168 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229930.peg.1071 CDS AEJP02000019.1 67594 67088 -1 - 507 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229930.peg.1072 CDS AEJP02000019.1 69964 68702 -1 - 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis;
YrdC-YciO-Sua5 protein family
fig|6666666.229930.peg.1073 CDS AEJP02000019.1 70641 70099 -3 - 543 hypothetical protein - none -
fig|6666666.229930.peg.1074 CDS AEJP02000019.1 71017 70865 -1 - 153 hypothetical protein - none -
fig|6666666.229930.peg.1075 CDS AEJP02000019.1 71169 71020 -3 - 150 hypothetical protein - none -
fig|6666666.229930.peg.1076 CDS AEJP02000019.1 72260 71256 -2 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229930.peg.1077 CDS AEJP02000019.1 72316 72765 1 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229930.peg.1078 CDS AEJP02000019.1 72775 73218 1 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229930.peg.1079 CDS AEJP02000019.1 76636 73220 -1 - 3417 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229930.peg.1080 CDS AEJP02000019.1 77396 76704 -2 - 693 Type II secretory pathway, component PulJ - none -
fig|6666666.229930.peg.1081 CDS AEJP02000019.1 77689 77447 -1 - 243 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229930.peg.1082 CDS AEJP02000019.1 78663 78196 -3 - 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229930.peg.1083 CDS AEJP02000019.1 79958 78678 -2 - 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229930.peg.1084 CDS AEJP02000019.1 81201 79993 -3 - 1209 TolA protein Ton and Tol transport systems
fig|6666666.229930.peg.1085 CDS AEJP02000019.1 81640 81218 -1 - 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229930.peg.1086 CDS AEJP02000019.1 82415 81726 -2 - 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229930.peg.1087 CDS AEJP02000019.1 82849 82445 -1 - 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229930.peg.1088 CDS AEJP02000019.1 82914 83033 3 + 120 hypothetical protein - none -
fig|6666666.229930.peg.1089 CDS AEJP02000019.1 84494 83358 -2 - 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229930.peg.1090 CDS AEJP02000019.1 85969 84509 -1 - 1461 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229930.peg.1091 CDS AEJP02000019.1 86526 86837 3 + 312 Chromosome segregation ATPases - none -
fig|6666666.229930.peg.1092 CDS AEJP02000019.1 87394 86891 -1 - 504 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229930.peg.1093 CDS AEJP02000019.1 88483 87869 -1 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229930.peg.1094 CDS AEJP02000019.1 89119 88547 -1 - 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229930.peg.1095 CDS AEJP02000019.1 89585 89175 -2 - 411 excinuclease ABC subunit A - none -
fig|6666666.229930.peg.1096 CDS AEJP02000019.1 90337 89597 -1 - 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229930.peg.1097 CDS AEJP02000019.1 90742 90371 -1 - 372 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) Folate Biosynthesis
fig|6666666.229930.peg.1098 CDS AEJP02000019.1 92191 90923 -1 - 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229930.peg.1099 CDS AEJP02000019.1 92409 92549 3 + 141 hypothetical protein - none -
fig|6666666.229930.peg.1100 CDS AEJP02000019.1 94361 92583 -2 - 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229930.peg.1101 CDS AEJP02000019.1 95168 95893 2 + 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229930.peg.1102 CDS AEJP02000019.1 98540 95973 -2 - 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229930.peg.1103 CDS AEJP02000019.1 100014 98683 -3 - 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229930.peg.1104 CDS AEJP02000019.1 100415 102367 2 + 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229930.peg.1105 CDS AEJP02000019.1 102526 102933 1 + 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229930.peg.1106 CDS AEJP02000019.1 103020 103673 3 + 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229930.peg.1107 CDS AEJP02000019.1 104025 105377 3 + 1353 Histidine permease YuiF - none -
fig|6666666.229930.peg.1108 CDS AEJP02000019.1 105441 106007 3 + 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229930.peg.1109 CDS AEJP02000019.1 107488 106064 -1 - 1425 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229930.peg.1110 CDS AEJP02000019.1 107596 107724 1 + 129 hypothetical protein - none -
fig|6666666.229930.peg.1111 CDS AEJP02000019.1 107832 107975 3 + 144 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) CBSS-87626.3.peg.3639;
Ubiquinone Biosynthesis
fig|6666666.229930.peg.1112 CDS AEJP02000019.1 109420 108689 -1 - 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229930.peg.1113 CDS AEJP02000019.1 110411 109422 -2 - 990 Octaprenyl diphosphate synthase (EC 2.5.1.90) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229930.peg.1114 CDS AEJP02000019.1 110659 110970 1 + 312 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229930.peg.1115 CDS AEJP02000019.1 110991 111248 3 + 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229930.peg.1116 CDS AEJP02000019.1 111320 112252 2 + 933 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229930.peg.1117 CDS AEJP02000019.1 112330 113247 1 + 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229930.peg.1118 CDS AEJP02000019.1 113284 114459 1 + 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229930.peg.1119 CDS AEJP02000019.1 114575 114456 -2 - 120 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229930.peg.1120 CDS AEJP02000019.1 115009 114527 -1 - 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229930.peg.1121 CDS AEJP02000019.1 115384 117009 1 + 1626 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229930.peg.1122 CDS AEJP02000019.1 117110 117376 2 + 267 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229930.peg.1123 CDS AEJP02000019.1 117393 118034 3 + 642 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229930.peg.1124 CDS AEJP02000019.1 118044 118982 3 + 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229930.peg.1125 CDS AEJP02000019.1 118992 119975 3 + 984 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229930.peg.1126 CDS AEJP02000019.1 119972 120970 2 + 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229930.peg.1127 CDS AEJP02000019.1 121784 121077 -2 - 708 Aerobic respiration control protein arcA - none -
fig|6666666.229930.peg.1128 CDS AEJP02000019.1 122186 122046 -2 - 141 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.229930.peg.1129 CDS AEJP02000019.1 122462 122196 -2 - 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229930.peg.1130 CDS AEJP02000019.1 123243 122674 -3 - 570 Lysine decarboxylase family - none -
fig|6666666.229930.peg.1131 CDS AEJP02000019.1 123386 125176 2 + 1791 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229930.peg.1132 CDS AEJP02000019.1 125278 125165 -1 - 114 hypothetical protein - none -
fig|6666666.229930.peg.1133 CDS AEJP02000019.1 125256 125645 3 + 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229930.peg.1134 CDS AEJP02000019.1 128925 126043 -3 - 2883 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229930.peg.1135 CDS AEJP02000019.1 129168 129290 3 + 123 hypothetical protein - none -
fig|6666666.229930.peg.1136 CDS AEJP02000019.1 129400 130359 1 + 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229930.peg.1137 CDS AEJP02000019.1 130773 130558 -3 - 216 Thioredoxin - none -
fig|6666666.229930.peg.1138 CDS AEJP02000019.1 131975 130980 -2 - 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229930.peg.1139 CDS AEJP02000019.1 133129 131999 -1 - 1131 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229930.peg.1140 CDS AEJP02000019.1 134110 134811 1 + 702 Peptidoglycan hydrolase VirB1, involved in T-DNA transfer - none -
fig|6666666.229930.peg.1141 CDS AEJP02000019.1 134826 135149 3 + 324 Major pilus subunit of type IV secretion complex, VirB2 - none -
fig|6666666.229930.peg.1142 CDS AEJP02000019.1 135130 135291 1 + 162 hypothetical protein - none -
fig|6666666.229930.peg.1143 CDS AEJP02000019.1 135288 136178 3 + 891 Forms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9) - none -
fig|6666666.229930.peg.1144 CDS AEJP02000019.1 136189 136995 1 + 807 hypothetical protein - none -
fig|6666666.229930.peg.1145 CDS AEJP02000019.1 137891 137232 -2 - 660 putative membrane protein - none -
fig|6666666.229930.peg.1146 CDS AEJP02000019.1 137878 138012 1 + 135 hypothetical protein - none -
fig|6666666.229930.peg.1147 CDS AEJP02000019.1 138027 138791 3 + 765 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229930.peg.1148 CDS AEJP02000019.1 140062 139055 -1 - 1008 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229930.peg.1149 CDS AEJP02000019.1 140220 141593 3 + 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229930.peg.1150 CDS AEJP02000019.1 141973 143091 1 + 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229930.peg.1151 CDS AEJP02000019.1 143091 143861 3 + 771 HesA/MoeB/ThiF family protein related to EC-YgdL - none -
fig|6666666.229930.peg.1152 CDS AEJP02000019.1 143961 144980 3 + 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229930.peg.1153 CDS AEJP02000019.1 145108 145920 1 + 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229930.peg.1154 CDS AEJP02000019.1 146491 146000 -1 - 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229930.peg.1155 CDS AEJP02000019.1 147446 146502 -2 - 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229930.peg.1156 CDS AEJP02000019.1 147522 148199 3 + 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229930.peg.1157 CDS AEJP02000019.1 148275 148156 -3 - 120 hypothetical protein - none -
fig|6666666.229930.peg.1158 CDS AEJP02000019.1 148572 148309 -3 - 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229930.peg.1159 CDS AEJP02000019.1 148840 150417 1 + 1578 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229930.peg.1160 CDS AEJP02000019.1 150495 151421 3 + 927 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229930.peg.1161 CDS AEJP02000019.1 151635 151799 3 + 165 FIG01055344: hypothetical protein - none -
fig|6666666.229930.peg.1162 CDS AEJP02000019.1 154679 155173 2 + 495 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229930.peg.1163 CDS AEJP02000019.1 155173 156117 1 + 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229930.peg.1164 CDS AEJP02000019.1 157869 156571 -3 - 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229930.peg.1165 CDS AEJP02000019.1 158926 158033 -1 - 894 Tyrosine recombinase XerD - none -
fig|6666666.229930.peg.1166 CDS AEJP02000019.1 160089 158929 -3 - 1161 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229930.peg.1167 CDS AEJP02000019.1 160328 160089 -2 - 240 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229930.peg.1168 CDS AEJP02000019.1 160792 160334 -1 - 459 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229930.peg.1169 CDS AEJP02000019.1 160855 161760 1 + 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229930.peg.1170 CDS AEJP02000019.1 162225 161851 -3 - 375 opacity associated protein - none -
fig|6666666.229930.peg.1171 CDS AEJP02000019.1 163600 162287 -1 - 1314 Cell envelope opacity-associated protein A - none -
fig|6666666.229930.peg.1172 CDS AEJP02000019.1 164803 163772 -1 - 1032 Lysyl-lysine 2,3-aminomutase Translation elongation factor P lysylation
fig|6666666.229930.peg.1173 CDS AEJP02000019.1 164868 165389 3 + 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229930.peg.1174 CDS AEJP02000019.1 165719 167095 2 + 1377 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229930.peg.1175 CDS AEJP02000019.1 167257 168471 1 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229930.peg.1176 CDS AEJP02000019.1 169214 168537 -2 - 678 YheO-like PAS domain - none -
fig|6666666.229930.peg.1177 CDS AEJP02000019.1 169783 169277 -1 - 507 Arabinose efflux permease - none -
fig|6666666.229930.peg.1178 CDS AEJP02000019.1 170507 169776 -2 - 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229930.peg.1179 CDS AEJP02000019.1 170618 171361 2 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.1180 CDS AEJP02000019.1 171369 172781 3 + 1413 Putative cell division protein precursor - none -
fig|6666666.229930.peg.1181 CDS AEJP02000019.1 173715 172852 -3 - 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229930.peg.1182 CDS AEJP02000019.1 174597 173857 -3 - 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229930.peg.1183 CDS AEJP02000019.1 177054 174742 -3 - 2313 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229930.peg.1184 CDS AEJP02000019.1 177974 177153 -2 - 822 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229930.peg.1185 CDS AEJP02000019.1 178317 178667 3 + 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229930.peg.1186 CDS AEJP02000019.1 178668 179021 3 + 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229930.peg.1187 CDS AEJP02000019.1 179023 180069 1 + 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229930.peg.1188 CDS AEJP02000019.1 180071 181213 2 + 1143 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229930.peg.1189 CDS AEJP02000019.1 182278 181313 -1 - 966 6-phosphofructokinase (EC 2.7.1.11) D-Tagatose and Galactitol Utilization;
Glycolysis and Gluconeogenesis
fig|6666666.229930.peg.1190 CDS AEJP02000019.1 182900 182340 -2 - 561 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229930.peg.1191 CDS AEJP02000019.1 183262 182924 -1 - 339 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229930.peg.1192 CDS AEJP02000019.1 183828 183262 -3 - 567 FIG00696199: hypothetical protein - none -
fig|6666666.229930.peg.1193 CDS AEJP02000019.1 184609 183830 -1 - 780 UPF0246 protein YaaA - none -
fig|6666666.229930.peg.1194 CDS AEJP02000019.1 185299 184631 -1 - 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229930.peg.1195 CDS AEJP02000019.1 185585 185968 2 + 384 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229930.peg.1196 CDS AEJP02000019.1 186132 187928 3 + 1797 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229930.peg.1197 CDS AEJP02000019.1 187939 188961 1 + 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229930.peg.1198 CDS AEJP02000019.1 188968 189648 1 + 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229930.peg.1199 CDS AEJP02000019.1 189645 190553 3 + 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases;
tRNA modification Archaea
fig|6666666.229930.peg.1200 CDS AEJP02000019.1 192012 190657 -3 - 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229930.peg.1201 CDS AEJP02000019.1 193729 192140 -1 - 1590 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229930.peg.1202 CDS AEJP02000019.1 194034 193771 -3 - 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229930.peg.1203 CDS AEJP02000019.1 194324 193989 -2 - 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229930.peg.1204 CDS AEJP02000019.1 194504 194370 -2 - 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.229930.peg.1205 CDS AEJP02000019.1 194922 196283 3 + 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229930.peg.1206 CDS AEJP02000019.1 196291 197394 1 + 1104 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229930.peg.1207 CDS AEJP02000019.1 197398 198474 1 + 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229930.peg.1208 CDS AEJP02000019.1 199276 198521 -1 - 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229930.peg.1209 CDS AEJP02000019.1 199464 200039 3 + 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229930.peg.1210 CDS AEJP02000020.1 1457 90 -2 - 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.1211 CDS AEJP02000020.1 1643 2719 2 + 1077 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229930.peg.1212 CDS AEJP02000020.1 3006 2785 -3 - 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229930.peg.1213 CDS AEJP02000020.1 3113 3808 2 + 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229930.peg.1214 CDS AEJP02000020.1 3921 5084 3 + 1164 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229930.peg.1215 CDS AEJP02000020.1 5149 6228 1 + 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229930.peg.1216 CDS AEJP02000020.1 6402 6241 -3 - 162 hypothetical protein - none -
fig|6666666.229930.peg.1217 CDS AEJP02000020.1 6436 7578 1 + 1143 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229930.peg.1218 CDS AEJP02000020.1 7571 8494 2 + 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229930.peg.1219 CDS AEJP02000020.1 9350 8532 -2 - 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229930.peg.1220 CDS AEJP02000020.1 9637 10521 1 + 885 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229930.peg.1221 CDS AEJP02000020.1 10595 11002 2 + 408 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229930.peg.1222 CDS AEJP02000020.1 11053 11469 1 + 417 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229930.peg.1223 CDS AEJP02000020.1 12538 11603 -1 - 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229930.peg.1224 CDS AEJP02000020.1 13197 12547 -3 - 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229930.peg.1225 CDS AEJP02000020.1 14151 13477 -3 - 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229930.peg.1226 CDS AEJP02000020.1 14828 14154 -2 - 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229930.peg.1227 CDS AEJP02000020.1 14980 15258 1 + 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229930.peg.1228 CDS AEJP02000020.1 15258 15953 3 + 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229930.peg.1229 CDS AEJP02000020.1 15950 16429 2 + 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229930.peg.1230 CDS AEJP02000020.1 16426 17436 1 + 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229930.peg.1231 CDS AEJP02000020.1 17469 18209 3 + 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229930.peg.1232 CDS AEJP02000020.1 18237 18812 3 + 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229930.peg.1233 CDS AEJP02000020.1 18827 19018 2 + 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229930.peg.1234 CDS AEJP02000020.1 19035 20204 3 + 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229930.peg.1235 CDS AEJP02000020.1 20628 20449 -3 - 180 hypothetical protein - none -
fig|6666666.229930.peg.1236 CDS AEJP02000020.1 21662 20901 -2 - 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229930.peg.1237 CDS AEJP02000020.1 21761 23044 2 + 1284 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) KDO2-Lipid A biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229930.peg.1238 CDS AEJP02000020.1 23045 23530 2 + 486 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229930.peg.1239 CDS AEJP02000020.1 24317 23592 -2 - 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229930.peg.1240 CDS AEJP02000020.1 24406 25449 1 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229930.peg.1241 CDS AEJP02000020.1 25887 25546 -3 - 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229930.peg.1242 CDS AEJP02000020.1 25991 26908 2 + 918 transcriptional regulator MtrA - none -
fig|6666666.229930.peg.1243 CDS AEJP02000020.1 26996 28840 2 + 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229930.peg.1244 CDS AEJP02000020.1 31319 28881 -2 - 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.1245 CDS AEJP02000020.1 31527 32150 3 + 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229930.peg.1246 CDS AEJP02000020.1 32250 32125 -3 - 126 hypothetical protein - none -
fig|6666666.229930.peg.1247 CDS AEJP02000020.1 32302 32679 1 + 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229930.peg.1248 CDS AEJP02000020.1 32666 32992 2 + 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229930.peg.1249 CDS AEJP02000020.1 33005 33235 2 + 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229930.peg.1250 CDS AEJP02000020.1 33251 33700 2 + 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome LSU bacterial
fig|6666666.229930.peg.1251 CDS AEJP02000020.1 33920 35038 2 + 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
YrdC-YciO-Sua5 protein family
fig|6666666.229930.peg.1252 CDS AEJP02000020.1 36177 35095 -3 - 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229930.peg.1253 CDS AEJP02000020.1 37853 36411 -2 - 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229930.peg.1254 CDS AEJP02000020.1 38923 38186 -1 - 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229930.peg.1255 CDS AEJP02000020.1 41325 38920 -3 - 2406 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229930.peg.1256 CDS AEJP02000020.1 41746 42615 1 + 870 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229930.peg.1257 CDS AEJP02000020.1 42685 43758 1 + 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229930.peg.1258 CDS AEJP02000020.1 43758 44246 3 + 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229930.peg.1259 CDS AEJP02000020.1 44706 44356 -3 - 351 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.229930.peg.1260 CDS AEJP02000020.1 45481 44732 -1 - 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229930.peg.1261 CDS AEJP02000020.1 46074 45547 -3 - 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229930.peg.1262 CDS AEJP02000020.1 46348 46100 -1 - 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229930.peg.1263 CDS AEJP02000020.1 46534 46689 1 + 156 hypothetical protein - none -
fig|6666666.229930.peg.1264 CDS AEJP02000020.1 48144 46843 -3 - 1302 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229930.peg.1265 CDS AEJP02000020.1 48707 48159 -2 - 549 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229930.peg.1266 CDS AEJP02000020.1 48866 49192 2 + 327 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229930.peg.1267 CDS AEJP02000020.1 49486 50061 1 + 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229930.peg.1268 CDS AEJP02000020.1 50885 50097 -2 - 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229930.peg.1269 CDS AEJP02000020.1 50992 51966 1 + 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229930.peg.1270 CDS AEJP02000020.1 51968 52705 2 + 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229930.peg.1271 CDS AEJP02000020.1 53273 52875 -2 - 399 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229930.peg.1272 CDS AEJP02000020.1 54810 53227 -3 - 1584 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229930.peg.1273 CDS AEJP02000020.1 55534 54875 -1 - 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229930.peg.1274 CDS AEJP02000020.1 55944 55651 -3 - 294 COG1872 - none -
fig|6666666.229930.peg.1275 CDS AEJP02000020.1 56529 55969 -3 - 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229930.peg.1276 CDS AEJP02000020.1 57492 56545 -3 - 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229930.peg.1277 CDS AEJP02000020.1 58945 58145 -1 - 801 Orf2 - none -
fig|6666666.229930.peg.1278 CDS AEJP02000020.1 62197 59099 -1 - 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229930.peg.1279 CDS AEJP02000020.1 63407 62211 -2 - 1197 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229930.peg.1280 CDS AEJP02000020.1 63999 63433 -3 - 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229930.peg.1281 CDS AEJP02000020.1 65011 64199 -1 - 813 Cell division protein - none -
fig|6666666.229930.peg.1282 CDS AEJP02000020.1 67319 65121 -2 - 2199 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229930.peg.1283 CDS AEJP02000020.1 67547 68410 2 + 864 Involved in lipopolysaccharide biosynthesis - none -
fig|6666666.229930.peg.1284 CDS AEJP02000020.1 69421 68417 -1 - 1005 putative capsular polysaccharide synthesis protein - none -
fig|6666666.229930.peg.1285 CDS AEJP02000020.1 70278 69430 -3 - 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229930.peg.1286 CDS AEJP02000020.1 70536 70748 3 + 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229930.peg.1287 CDS AEJP02000020.1 70811 71503 2 + 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229930.peg.1288 CDS AEJP02000020.1 71504 72526 2 + 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229930.peg.1289 CDS AEJP02000020.1 72536 73588 2 + 1053 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229930.peg.1290 CDS AEJP02000020.1 74448 73591 -3 - 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229930.peg.1291 CDS AEJP02000020.1 74658 74488 -3 - 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229930.peg.1292 CDS AEJP02000020.1 74843 74670 -2 - 174 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.229930.peg.1293 CDS AEJP02000020.1 75774 75115 -3 - 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229930.peg.1294 CDS AEJP02000020.1 75953 75825 -2 - 129 hypothetical protein - none -
fig|6666666.229930.peg.1295 CDS AEJP02000020.1 75952 77151 1 + 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229930.peg.1296 CDS AEJP02000020.1 77220 77675 3 + 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229930.peg.1297 CDS AEJP02000020.1 77675 78274 2 + 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229930.peg.1298 CDS AEJP02000020.1 78298 78441 1 + 144 FIG00696234: hypothetical protein - none -
fig|6666666.229930.peg.1299 CDS AEJP02000020.1 78554 79198 2 + 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229930.peg.1300 CDS AEJP02000020.1 80701 79331 -1 - 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229930.peg.1301 CDS AEJP02000020.1 81641 80796 -2 - 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229930.peg.1302 CDS AEJP02000020.1 84303 81736 -3 - 2568 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229930.peg.1303 CDS AEJP02000020.1 84437 85246 2 + 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229930.peg.1304 CDS AEJP02000020.1 85257 85775 3 + 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229930.peg.1305 CDS AEJP02000020.1 85772 86296 2 + 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229930.peg.1306 CDS AEJP02000020.1 86296 86688 1 + 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229930.peg.1307 CDS AEJP02000020.1 86708 88117 2 + 1410 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229930.peg.1308 CDS AEJP02000020.1 88331 88858 2 + 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229930.peg.1309 CDS AEJP02000020.1 88882 89970 1 + 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229930.peg.1310 CDS AEJP02000020.1 89973 90827 3 + 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229930.peg.1311 CDS AEJP02000020.1 91412 90933 -2 - 480 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229930.peg.1312 CDS AEJP02000020.1 91582 94413 1 + 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229930.peg.1313 CDS AEJP02000021.1 154 459 1 + 306 putative phage-related membrane protein - none -
fig|6666666.229930.peg.1314 CDS AEJP02000021.1 467 949 2 + 483 putative phage-related secreted protein - none -
fig|6666666.229930.peg.1315 CDS AEJP02000021.1 1958 2443 2 + 486 Ferritin-like protein 2 - none -
fig|6666666.229930.peg.1316 CDS AEJP02000021.1 2459 2956 2 + 498 Ferritin-like protein 2 - none -
fig|6666666.229930.peg.1317 CDS AEJP02000021.1 3140 3018 -2 - 123 hypothetical protein - none -
fig|6666666.229930.peg.1318 CDS AEJP02000021.1 3296 4069 2 + 774 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229930.peg.1319 CDS AEJP02000021.1 4188 5120 3 + 933 Universal stress protein E Universal stress protein family
fig|6666666.229930.peg.1320 CDS AEJP02000021.1 5247 6083 3 + 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229930.peg.1321 CDS AEJP02000021.1 8774 6168 -2 - 2607 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229930.peg.1322 CDS AEJP02000021.1 9848 9012 -2 - 837 COG0613, Predicted metal-dependent phosphoesterases (PHP family) YrdC-YciO-Sua5 protein family;
tRNA modification Bacteria
fig|6666666.229930.peg.1323 CDS AEJP02000021.1 10881 9862 -3 - 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229930.peg.1324 CDS AEJP02000021.1 13563 10954 -3 - 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229930.peg.1325 CDS AEJP02000021.1 13985 15175 2 + 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229930.peg.1326 CDS AEJP02000021.1 15789 15226 -3 - 564 Transcriptional regulator, TetR family - none -
fig|6666666.229930.peg.1327 CDS AEJP02000021.1 15937 16893 1 + 957 HlyD family secretion protein - none -
fig|6666666.229930.peg.1328 CDS AEJP02000021.1 16896 19640 3 + 2745 ABC-type multidrug transport system, permease component - none -
fig|6666666.229930.peg.1329 CDS AEJP02000021.1 19642 20769 1 + 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229930.peg.1330 CDS AEJP02000021.1 20789 22207 2 + 1419 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229930.peg.1331 CDS AEJP02000021.1 22185 22316 3 + 132 hypothetical protein - none -
fig|6666666.229930.peg.1332 CDS AEJP02000021.1 22335 23354 3 + 1020 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229930.peg.1333 CDS AEJP02000021.1 23354 24148 2 + 795 Glutathione synthetase (EC 6.3.2.3) Cluster containing Glutathione synthetase;
Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229930.peg.1334 CDS AEJP02000021.1 24161 25195 2 + 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229930.peg.1335 CDS AEJP02000021.1 25277 25486 2 + 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229930.peg.1336 CDS AEJP02000021.1 27113 25605 -2 - 1509 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229930.peg.1337 CDS AEJP02000021.1 27401 27141 -2 - 261 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229930.peg.1338 CDS AEJP02000021.1 28000 27398 -1 - 603 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229930.peg.1339 CDS AEJP02000021.1 28844 28095 -2 - 750 ABC transporter ATP-binding protein - none -
fig|6666666.229930.peg.1340 CDS AEJP02000021.1 29854 28841 -1 - 1014 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229930.peg.1341 CDS AEJP02000021.1 30855 29854 -3 - 1002 ABC transporter, solute-binding protein - none -
fig|6666666.229930.peg.1342 CDS AEJP02000021.1 31066 31563 1 + 498 FIG00697418: hypothetical protein - none -
fig|6666666.229930.peg.1343 CDS AEJP02000021.1 31565 32542 2 + 978 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229930.peg.1344 CDS AEJP02000021.1 32574 33554 3 + 981 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229930.peg.1345 CDS AEJP02000021.1 34060 33644 -1 - 417 putative membrane protein - none -
fig|6666666.229930.peg.1346 CDS AEJP02000021.1 34201 35166 1 + 966 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229930.peg.1347 CDS AEJP02000021.1 35629 35261 -1 - 369 Probable lipoprotein nlpC precursor - none -
fig|6666666.229930.peg.1348 CDS AEJP02000021.1 36097 35801 -1 - 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229930.peg.1349 CDS AEJP02000021.1 38491 36101 -1 - 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229930.peg.1350 CDS AEJP02000021.1 39500 38511 -2 - 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229930.peg.1351 CDS AEJP02000021.1 40715 39840 -2 - 876 Probable protease htpX homolog - none -
fig|6666666.229930.peg.1352 CDS AEJP02000021.1 41398 42333 1 + 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) KDO2-Lipid A biosynthesis
fig|6666666.229930.peg.1353 CDS AEJP02000021.1 42333 42887 3 + 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) KDO2-Lipid A biosynthesis
fig|6666666.229930.peg.1354 CDS AEJP02000022.1 89 673 2 + 585 hypothetical protein - none -
fig|6666666.229930.peg.1355 CDS AEJP02000022.1 1068 715 -3 - 354 Bona fide RidA/YjgF/TdcF/RutC subgroup - none -
fig|6666666.229930.peg.1356 CDS AEJP02000022.1 1170 1886 3 + 717 FIG00904286: hypothetical protein - none -
fig|6666666.229930.peg.1357 CDS AEJP02000022.1 1892 2602 2 + 711 hypothetical protein - none -
fig|6666666.229930.peg.1358 CDS AEJP02000022.1 3264 2653 -3 - 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229930.peg.1359 CDS AEJP02000022.1 5803 3548 -1 - 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229930.peg.1360 CDS AEJP02000022.1 5987 5811 -2 - 177 hypothetical protein - none -
fig|6666666.229930.peg.1361 CDS AEJP02000022.1 8293 6395 -1 - 1899 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229930.peg.1362 CDS AEJP02000022.1 8796 9683 3 + 888 putative adhesin/invasin - none -
fig|6666666.229930.peg.1363 CDS AEJP02000022.1 11541 9787 -3 - 1755 ABC transporter ATP-binding protein - none -
fig|6666666.229930.peg.1364 CDS AEJP02000022.1 11837 12511 2 + 675 putative exported protein - none -
fig|6666666.229930.peg.1365 CDS AEJP02000022.1 12526 13557 1 + 1032 putative membrane protein - none -
fig|6666666.229930.peg.1366 CDS AEJP02000022.1 14169 16211 3 + 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229930.peg.1367 CDS AEJP02000022.1 16441 17511 1 + 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229930.peg.1368 CDS AEJP02000022.1 19653 18187 -3 - 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229930.peg.1369 CDS AEJP02000022.1 21032 19902 -2 - 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229930.peg.1370 CDS AEJP02000022.1 23021 21171 -2 - 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229930.peg.1371 CDS AEJP02000022.1 24071 23085 -2 - 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229930.peg.1372 CDS AEJP02000022.1 24313 25014 1 + 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229930.peg.1373 CDS AEJP02000022.1 25028 25915 2 + 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229930.peg.1374 CDS AEJP02000022.1 25925 26794 2 + 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229930.peg.1375 CDS AEJP02000022.1 26804 27682 2 + 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229930.peg.1376 CDS AEJP02000022.1 27837 28640 3 + 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229930.peg.1377 CDS AEJP02000022.1 28696 29841 1 + 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229930.peg.1378 CDS AEJP02000022.1 30546 30046 -3 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229930.peg.1379 CDS AEJP02000022.1 31651 30587 -1 - 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229930.peg.1380 CDS AEJP02000022.1 32066 31644 -2 - 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229930.peg.1381 CDS AEJP02000022.1 34868 32076 -2 - 2793 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229930.peg.1382 CDS AEJP02000022.1 35603 36643 2 + 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229930.peg.1383 CDS AEJP02000022.1 36985 37314 1 + 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229930.peg.1384 CDS AEJP02000022.1 37437 37324 -3 - 114 hypothetical protein - none -
fig|6666666.229930.peg.1385 CDS AEJP02000022.1 37439 37891 2 + 453 putative membrane protein - none -
fig|6666666.229930.peg.1386 CDS AEJP02000022.1 37892 38281 2 + 390 COG2363 - none -
fig|6666666.229930.peg.1387 CDS AEJP02000022.1 38278 42327 1 + 4050 HrpA-like helicases - none -
fig|6666666.229930.peg.1388 CDS AEJP02000022.1 42377 43687 2 + 1311 putative inner membrane protein - none -
fig|6666666.229930.peg.1389 CDS AEJP02000022.1 43785 44933 3 + 1149 Mobile element protein - none -
fig|6666666.229930.peg.1390 CDS AEJP02000022.1 44961 45119 3 + 159 hypothetical protein - none -
fig|6666666.229930.peg.1391 CDS AEJP02000022.1 45790 45125 -1 - 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229930.peg.1392 CDS AEJP02000022.1 46029 45907 -3 - 123 hypothetical protein - none -
fig|6666666.229930.peg.1393 CDS AEJP02000022.1 46429 46118 -1 - 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229930.peg.1394 CDS AEJP02000022.1 46927 46436 -1 - 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229930.peg.1395 CDS AEJP02000022.1 47588 46917 -2 - 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229930.peg.1396 CDS AEJP02000022.1 48705 47590 -3 - 1116 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229930.peg.1397 CDS AEJP02000022.1 50041 48716 -1 - 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229930.peg.1398 CDS AEJP02000022.1 51474 50044 -3 - 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229930.peg.1399 CDS AEJP02000022.1 52134 51613 -3 - 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229930.peg.1400 CDS AEJP02000022.1 54084 52177 -3 - 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229930.peg.1401 CDS AEJP02000022.1 56776 54383 -1 - 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229930.peg.1402 CDS AEJP02000022.1 57037 56822 -1 - 216 hypothetical protein - none -
fig|6666666.229930.peg.1403 CDS AEJP02000022.1 57380 57039 -2 - 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229930.peg.1404 CDS AEJP02000022.1 57514 58314 1 + 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229930.peg.1405 CDS AEJP02000022.1 58380 60971 3 + 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229930.peg.1406 CDS AEJP02000022.1 62330 61047 -2 - 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229930.peg.1407 CDS AEJP02000022.1 62459 63532 2 + 1074 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.229930.peg.1408 CDS AEJP02000023.1 1556 147 -2 - 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229930.peg.1409 CDS AEJP02000023.1 1943 3796 2 + 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229930.peg.1410 CDS AEJP02000023.1 3906 3793 -3 - 114 hypothetical protein - none -
fig|6666666.229930.peg.1411 CDS AEJP02000023.1 5291 6778 2 + 1488 Immunoglobulin A1 protease / autotransporter domain, T5aSS type secretion Autotransporter proteins;
Autotransporter proteins
fig|6666666.229930.peg.1412 CDS AEJP02000023.1 7306 6842 -1 - 465 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229930.peg.1413 CDS AEJP02000023.1 7464 8357 3 + 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229930.peg.1414 CDS AEJP02000023.1 8471 9175 2 + 705 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229930.peg.1415 CDS AEJP02000023.1 9306 9464 3 + 159 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229930.peg.1416 CDS AEJP02000023.1 9599 11110 2 + 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229930.peg.1417 CDS AEJP02000023.1 11425 12261 1 + 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229930.peg.1418 CDS AEJP02000023.1 13009 12314 -1 - 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229930.peg.1419 CDS AEJP02000023.1 14438 13002 -2 - 1437 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229930.peg.1420 CDS AEJP02000023.1 14529 14660 3 + 132 hypothetical protein - none -
fig|6666666.229930.peg.1421 CDS AEJP02000023.1 14749 17196 1 + 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229930.peg.1422 CDS AEJP02000023.1 17209 18153 1 + 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229930.peg.1423 CDS AEJP02000023.1 18181 18621 1 + 441 hypothetical protein - none -
fig|6666666.229930.peg.1424 CDS AEJP02000023.1 18677 19951 2 + 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229930.peg.1425 CDS AEJP02000023.1 19986 20729 3 + 744 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229930.peg.1426 CDS AEJP02000023.1 20825 22078 2 + 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229930.peg.1427 CDS AEJP02000023.1 22078 22965 1 + 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229930.peg.1428 CDS AEJP02000023.1 23253 23098 -3 - 156 hypothetical protein - none -
fig|6666666.229930.peg.1429 CDS AEJP02000023.1 23255 23584 2 + 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229930.peg.1430 CDS AEJP02000023.1 23610 24290 3 + 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229930.peg.1431 CDS AEJP02000023.1 24329 24652 2 + 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229930.peg.1432 CDS AEJP02000023.1 24652 25821 1 + 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229930.peg.1433 CDS AEJP02000023.1 25920 26576 3 + 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229930.peg.1434 CDS AEJP02000023.1 26595 27827 3 + 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229930.peg.1435 CDS AEJP02000023.1 27836 27955 2 + 120 hypothetical protein - none -
fig|6666666.229930.peg.1436 CDS AEJP02000023.1 28137 29183 3 + 1047 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229930.peg.1437 CDS AEJP02000023.1 29910 29269 -3 - 642 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229930.peg.1438 CDS AEJP02000023.1 31322 29919 -2 - 1404 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229930.peg.1439 CDS AEJP02000023.1 32177 31332 -2 - 846 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229930.peg.1440 CDS AEJP02000023.1 33133 32189 -1 - 945 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229930.peg.1441 CDS AEJP02000023.1 34180 33188 -1 - 993 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229930.peg.1442 CDS AEJP02000023.1 34893 36194 3 + 1302 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229930.peg.1443 CDS AEJP02000023.1 36218 38593 2 + 2376 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229930.peg.1444 CDS AEJP02000023.1 38608 39363 1 + 756 Hexuronate utilization operon transcriptional repressor ExuR D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229930.peg.1445 CDS AEJP02000023.1 39383 40567 2 + 1185 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229930.peg.1446 CDS AEJP02000023.1 40605 41162 3 + 558 hypothetical protein - none -
fig|6666666.229930.peg.1447 CDS AEJP02000023.1 41592 42482 3 + 891 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229930.peg.1448 CDS AEJP02000023.1 43296 42508 -3 - 789 Putative sulfate permease - none -
fig|6666666.229930.peg.1449 CDS AEJP02000023.1 44604 47021 3 + 2418 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229930.peg.1450 CDS AEJP02000023.1 48933 47083 -3 - 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229930.peg.1451 CDS AEJP02000023.1 50766 49009 -3 - 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229930.peg.1452 CDS AEJP02000023.1 51103 50888 -1 - 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229930.peg.1453 CDS AEJP02000023.1 51138 51305 3 + 168 hypothetical protein - none -
fig|6666666.229930.peg.1454 CDS AEJP02000023.1 51328 52356 1 + 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ;
YrdC-YciO-Sua5 protein family
fig|6666666.229930.peg.1455 CDS AEJP02000023.1 52421 52654 2 + 234 unknown - none -
fig|6666666.229930.peg.1456 CDS AEJP02000023.1 52657 52824 1 + 168 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229930.peg.1457 CDS AEJP02000023.1 52802 53236 2 + 435 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229930.peg.1458 CDS AEJP02000023.1 55316 53304 -2 - 2013 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229930.peg.1459 CDS AEJP02000023.1 56455 55418 -1 - 1038 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229930.peg.1460 CDS AEJP02000023.1 56595 57419 3 + 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229930.peg.1461 CDS AEJP02000023.1 57520 58467 1 + 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229930.peg.1462 CDS AEJP02000023.1 58545 58432 -3 - 114 hypothetical protein - none -
fig|6666666.229930.peg.1463 CDS AEJP02000023.1 58833 58687 -3 - 147 hypothetical protein - none -
fig|6666666.229930.peg.1464 CDS AEJP02000023.1 59490 58909 -3 - 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229930.peg.1465 CDS AEJP02000023.1 60890 59799 -2 - 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229930.peg.1466 CDS AEJP02000023.1 61762 61079 -1 - 684 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229930.peg.1467 CDS AEJP02000023.1 62542 62024 -1 - 519 Mobile element protein - none -
fig|6666666.229930.peg.1468 CDS AEJP02000024.1 1906 1325 -1 - 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229930.peg.1469 CDS AEJP02000024.1 2925 1996 -3 - 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.1470 CDS AEJP02000024.1 3299 2925 -2 - 375 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.1471 CDS AEJP02000024.1 4726 3290 -1 - 1437 Putative transport protein - none -
fig|6666666.229930.peg.1472 CDS AEJP02000024.1 5365 4766 -1 - 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229930.peg.1473 CDS AEJP02000024.1 6542 5358 -2 - 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229930.peg.1474 CDS AEJP02000024.1 7415 6627 -2 - 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229930.peg.1475 CDS AEJP02000024.1 7846 7436 -1 - 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229930.peg.1476 CDS AEJP02000024.1 9005 7983 -2 - 1023 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191) - none -
fig|6666666.229930.peg.1477 CDS AEJP02000024.1 9580 9005 -1 - 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229930.peg.1478 CDS AEJP02000024.1 12094 9683 -1 - 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229930.peg.1479 CDS AEJP02000024.1 13447 12113 -1 - 1335 Membrane-associated zinc metalloprotease - none -
fig|6666666.229930.peg.1480 CDS AEJP02000024.1 14325 13456 -3 - 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.1481 CDS AEJP02000024.1 15059 14340 -2 - 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229930.peg.1482 CDS AEJP02000024.1 16364 15081 -2 - 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229930.peg.1483 CDS AEJP02000024.1 16950 16393 -3 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229930.peg.1484 CDS AEJP02000024.1 17107 16964 -1 - 144 hypothetical protein - none -
fig|6666666.229930.peg.1485 CDS AEJP02000024.1 17888 17175 -2 - 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229930.peg.1486 CDS AEJP02000024.1 17946 18077 3 + 132 hypothetical protein - none -
fig|6666666.229930.peg.1487 CDS AEJP02000024.1 19703 18045 -2 - 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229930.peg.1488 CDS AEJP02000024.1 19827 21644 3 + 1818 ABC transporter ATP-binding protein - none -
fig|6666666.229930.peg.1489 CDS AEJP02000024.1 24234 22234 -3 - 2001 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229930.peg.1490 CDS AEJP02000024.1 26044 25289 -1 - 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229930.peg.1491 CDS AEJP02000024.1 26981 26106 -2 - 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229930.peg.1492 CDS AEJP02000024.1 27024 27338 3 + 315 Uncharacterized protein PM1437 - none -
fig|6666666.229930.peg.1493 CDS AEJP02000024.1 27634 27350 -1 - 285 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229930.peg.1494 CDS AEJP02000024.1 28236 27688 -3 - 549 FIG00903983: hypothetical protein - none -
fig|6666666.229930.peg.1495 CDS AEJP02000024.1 30115 28361 -1 - 1755 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229930.peg.1496 CDS AEJP02000024.1 30118 30666 1 + 549 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229930.peg.1497 CDS AEJP02000024.1 30671 31222 2 + 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229930.peg.1498 CDS AEJP02000024.1 31226 32026 2 + 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229930.peg.1499 CDS AEJP02000024.1 32902 32021 -1 - 882 Protein rarD - none -
fig|6666666.229930.peg.1500 CDS AEJP02000024.1 33120 32935 -3 - 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229930.peg.1501 CDS AEJP02000024.1 33761 34060 2 + 300 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229930.peg.1502 CDS AEJP02000024.1 34224 34340 3 + 117 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229930.peg.1503 CDS AEJP02000024.1 34519 34656 1 + 138 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229930.peg.1504 CDS AEJP02000024.1 34809 35279 3 + 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229930.peg.1505 CDS AEJP02000024.1 35394 37496 3 + 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229930.peg.1506 CDS AEJP02000025.1 468 1325 3 + 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.229930.peg.1507 CDS AEJP02000025.1 3057 1414 -3 - 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229930.peg.1508 CDS AEJP02000025.1 3468 3178 -3 - 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229930.peg.1509 CDS AEJP02000025.1 4037 3555 -2 - 483 FxsA protein - none -
fig|6666666.229930.peg.1510 CDS AEJP02000025.1 4267 5685 1 + 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229930.peg.1511 CDS AEJP02000025.1 6719 6877 2 + 159 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229930.peg.1512 CDS AEJP02000025.1 7046 6849 -2 - 198 hypothetical protein - none -
fig|6666666.229930.peg.1513 CDS AEJP02000025.1 7239 7093 -3 - 147 Integral membrane protein - none -
fig|6666666.229930.peg.1514 CDS AEJP02000025.1 8368 7784 -1 - 585 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229930.peg.1515 CDS AEJP02000026.1 356 183 -2 - 174 hypothetical protein - none -
fig|6666666.229930.peg.1516 CDS AEJP02000028.1 977 159 -2 - 819 Peptide transport system ATP-binding protein SapF - none -
fig|6666666.229930.peg.1517 CDS AEJP02000028.1 2033 981 -2 - 1053 Peptide transport system ATP-binding protein SapD - none -
fig|6666666.229930.peg.1518 CDS AEJP02000028.1 2928 2041 -3 - 888 Peptide transport system permease protein SapC - none -
fig|6666666.229930.peg.1519 CDS AEJP02000028.1 3802 2918 -1 - 885 Peptide transport system permease protein SapB - none -
fig|6666666.229930.peg.1520 CDS AEJP02000028.1 5514 3883 -3 - 1632 Peptide transport periplasmic protein sapA (TC 3.A.1.5.5) - none -
fig|6666666.229930.peg.1521 CDS AEJP02000028.1 5780 7195 2 + 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229930.peg.1522 CDS AEJP02000028.1 7209 8288 3 + 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229930.peg.1523 CDS AEJP02000028.1 8372 9331 2 + 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229930.peg.1524 CDS AEJP02000028.1 9462 9328 -3 - 135 hypothetical protein - none -
fig|6666666.229930.peg.1525 CDS AEJP02000028.1 9696 9547 -3 - 150 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229930.peg.1526 CDS AEJP02000028.1 10007 9711 -2 - 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229930.peg.1527 CDS AEJP02000028.1 11071 10127 -1 - 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229930.peg.1528 CDS AEJP02000028.1 12936 11086 -3 - 1851 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229930.peg.1529 CDS AEJP02000028.1 14423 12936 -2 - 1488 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229930.peg.1530 CDS AEJP02000028.1 14914 14420 -1 - 495 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229930.peg.1531 CDS AEJP02000028.1 14889 15017 3 + 129 hypothetical protein - none -
fig|6666666.229930.peg.1532 CDS AEJP02000028.1 16863 15070 -3 - 1794 Mlr4739 protein - none -
fig|6666666.229930.peg.1533 CDS AEJP02000028.1 18171 17251 -3 - 921 RfbJ protein - none -
fig|6666666.229930.peg.1534 CDS AEJP02000028.1 19687 18179 -1 - 1509 putative integral membrane protein - none -
fig|6666666.229930.peg.1535 CDS AEJP02000028.1 20291 19674 -2 - 618 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229930.peg.1536 CDS AEJP02000028.1 21834 20320 -3 - 1515 Dca - none -
fig|6666666.229930.peg.1537 CDS AEJP02000028.1 22901 22353 -2 - 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229930.peg.1538 CDS AEJP02000028.1 22972 24012 1 + 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229930.peg.1539 CDS AEJP02000028.1 24233 24490 2 + 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization
fig|6666666.229930.peg.1540 CDS AEJP02000028.1 24604 26331 1 + 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization
fig|6666666.229930.peg.1541 CDS AEJP02000028.1 26392 26892 1 + 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229930.peg.1542 CDS AEJP02000028.1 29057 27018 -2 - 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229930.peg.1543 CDS AEJP02000028.1 29199 29564 3 + 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229930.peg.1544 CDS AEJP02000028.1 29620 31158 1 + 1539 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229930.peg.1545 CDS AEJP02000028.1 32020 31433 -1 - 588 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229930.peg.1546 CDS AEJP02000028.1 32997 32023 -3 - 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229930.peg.1547 CDS AEJP02000028.1 33099 33665 3 + 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229930.peg.1548 CDS AEJP02000028.1 33821 34765 2 + 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229930.peg.1549 CDS AEJP02000028.1 35308 36492 1 + 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229930.peg.1550 CDS AEJP02000028.1 36507 37193 3 + 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229930.peg.1551 CDS AEJP02000028.1 37193 38443 2 + 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229930.peg.1552 CDS AEJP02000028.1 38544 39623 3 + 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229930.peg.1553 CDS AEJP02000028.1 39754 39632 -1 - 123 hypothetical protein - none -
fig|6666666.229930.peg.1554 CDS AEJP02000028.1 39769 41175 1 + 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229930.peg.1555 CDS AEJP02000028.1 41199 42281 3 + 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229930.peg.1556 CDS AEJP02000028.1 42297 43946 3 + 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229930.peg.1557 CDS AEJP02000028.1 44086 44559 1 + 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229930.peg.1558 CDS AEJP02000028.1 44566 44991 1 + 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229930.peg.1559 CDS AEJP02000028.1 45010 45993 1 + 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229930.peg.1560 CDS AEJP02000028.1 46003 46494 1 + 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229930.peg.1561 CDS AEJP02000028.1 46503 47126 3 + 624 L-lysine permease - none -
fig|6666666.229930.peg.1562 CDS AEJP02000028.1 47148 47960 3 + 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229930.peg.1563 CDS AEJP02000028.1 48375 48127 -3 - 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229930.peg.1564 CDS AEJP02000028.1 48712 48443 -1 - 270 hypothetical protein - none -
fig|6666666.229930.peg.1565 CDS AEJP02000028.1 49864 48734 -1 - 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229930.peg.1566 CDS AEJP02000028.1 50722 50066 -1 - 657 hypothetical protein - none -
fig|6666666.229930.peg.1567 CDS AEJP02000028.1 53046 50776 -3 - 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229930.peg.1568 CDS AEJP02000028.1 54821 53349 -2 - 1473 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229930.peg.1569 CDS AEJP02000028.1 54959 55081 2 + 123 hypothetical protein - none -
fig|6666666.229930.peg.1570 CDS AEJP02000028.1 55880 56020 2 + 141 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229930.peg.1571 CDS AEJP02000028.1 56072 58105 2 + 2034 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229930.peg.1572 CDS AEJP02000028.1 58089 59129 3 + 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229930.peg.1573 CDS AEJP02000028.1 61240 59189 -1 - 2052 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229930.peg.1574 CDS AEJP02000028.1 62225 61335 -2 - 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229930.peg.1575 CDS AEJP02000028.1 63791 62247 -2 - 1545 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229930.peg.1576 CDS AEJP02000028.1 63946 63815 -1 - 132 hypothetical protein - none -
fig|6666666.229930.peg.1577 CDS AEJP02000028.1 65105 63915 -2 - 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229930.peg.1578 CDS AEJP02000028.1 65562 66680 3 + 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229930.peg.1579 CDS AEJP02000028.1 66757 68040 1 + 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229930.peg.1580 CDS AEJP02000028.1 68126 69025 2 + 900 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229930.peg.1581 CDS AEJP02000028.1 70133 69402 -2 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229930.peg.1582 CDS AEJP02000028.1 71363 70149 -2 - 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229930.peg.1583 CDS AEJP02000028.1 71492 72148 2 + 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229930.peg.1584 CDS AEJP02000028.1 73562 72249 -2 - 1314 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229930.peg.1585 CDS AEJP02000028.1 73742 74218 2 + 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229930.peg.1586 CDS AEJP02000028.1 74593 74291 -1 - 303 FIG004454: RNA binding protein - none -
fig|6666666.229930.peg.1587 CDS AEJP02000028.1 74761 75060 1 + 300 Phage-related protein - none -
fig|6666666.229930.peg.1588 CDS AEJP02000028.1 75057 75353 3 + 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229930.peg.1589 CDS AEJP02000028.1 76000 75386 -1 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229930.peg.1590 CDS AEJP02000028.1 76027 77424 1 + 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229930.peg.1591 CDS AEJP02000028.1 78207 77728 -3 - 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229930.peg.1592 CDS AEJP02000028.1 78268 79071 1 + 804 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229930.peg.1593 CDS AEJP02000028.1 79071 79505 3 + 435 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229930.peg.1594 CDS AEJP02000028.1 79540 80277 1 + 738 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229930.peg.1595 CDS AEJP02000028.1 80280 80894 3 + 615 ABC transporter ATP-binding protein - none -
fig|6666666.229930.peg.1596 CDS AEJP02000028.1 80891 81751 2 + 861 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229930.peg.1597 CDS AEJP02000028.1 82047 83495 3 + 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229930.peg.1598 CDS AEJP02000028.1 83546 89317 2 + 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229930.peg.1599 CDS AEJP02000028.1 89450 90499 2 + 1050 Putative membrane protein YeiH - none -
fig|6666666.229930.peg.1600 CDS AEJP02000028.1 90619 92976 1 + 2358 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229930.peg.1601 CDS AEJP02000028.1 93760 93086 -1 - 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229930.peg.1602 CDS AEJP02000028.1 94298 93837 -2 - 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229930.peg.1603 CDS AEJP02000028.1 96125 94353 -2 - 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229930.peg.1604 CDS AEJP02000028.1 96473 97564 2 + 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229930.peg.1605 CDS AEJP02000028.1 97656 98405 3 + 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229930.peg.1606 CDS AEJP02000028.1 98446 99306 1 + 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229930.peg.1607 CDS AEJP02000028.1 99300 99995 3 + 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229930.peg.1608 CDS AEJP02000028.1 101292 100078 -3 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229930.peg.1609 CDS AEJP02000028.1 101554 101781 1 + 228 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229930.peg.1610 CDS AEJP02000028.1 102308 102045 -2 - 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229930.peg.1611 CDS AEJP02000028.1 102435 103169 3 + 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229930.peg.1612 CDS AEJP02000028.1 103176 104093 3 + 918 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229930.peg.1613 CDS AEJP02000028.1 104994 104389 -3 - 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229930.peg.1614 CDS AEJP02000028.1 106492 105098 -1 - 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229930.peg.1615 CDS AEJP02000028.1 106702 107151 1 + 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229930.peg.1616 CDS AEJP02000028.1 107190 107318 3 + 129 RNA-binding domain protein - none -
fig|6666666.229930.peg.1617 CDS AEJP02000028.1 107346 107474 3 + 129 RNA-binding domain protein - none -
fig|6666666.229930.peg.1618 CDS AEJP02000028.1 108193 111057 1 + 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229930.peg.1619 CDS AEJP02000028.1 111124 112017 1 + 894 hypothetical protein - none -
fig|6666666.229930.peg.1620 CDS AEJP02000028.1 112136 112014 -2 - 123 HipA protein Persister Cells
fig|6666666.229930.peg.1621 CDS AEJP02000028.1 112252 112136 -1 - 117 HipA protein Persister Cells
fig|6666666.229930.peg.1622 CDS AEJP02000028.1 112584 112246 -3 - 339 HipA protein Persister Cells
fig|6666666.229930.peg.1623 CDS AEJP02000028.1 112915 112634 -1 - 282 HipB protein Persister Cells
fig|6666666.229930.peg.1624 CDS AEJP02000028.1 114573 113059 -3 - 1515 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229930.peg.1625 CDS AEJP02000028.1 115746 114586 -3 - 1161 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229930.peg.1626 CDS AEJP02000028.1 115955 116437 2 + 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229930.peg.1627 CDS AEJP02000028.1 118535 116556 -2 - 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229930.peg.1628 CDS AEJP02000028.1 119396 118608 -2 - 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229930.peg.1629 CDS AEJP02000028.1 120345 119488 -3 - 858 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229930.peg.1630 CDS AEJP02000028.1 121142 120468 -2 - 675 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229930.peg.1631 CDS AEJP02000028.1 121528 121103 -1 - 426 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229930.peg.1632 CDS AEJP02000028.1 123226 121718 -1 - 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229930.peg.1633 CDS AEJP02000028.1 124185 123283 -3 - 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229930.peg.1634 CDS AEJP02000028.1 124465 124304 -1 - 162 hypothetical protein - none -
fig|6666666.229930.peg.1635 CDS AEJP02000028.1 124549 125232 1 + 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229930.peg.1636 CDS AEJP02000028.1 125245 126966 1 + 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229930.peg.1637 CDS AEJP02000028.1 126999 127646 3 + 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229930.peg.1638 CDS AEJP02000028.1 127663 128355 1 + 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229930.peg.1639 CDS AEJP02000028.1 128533 129228 1 + 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229930.peg.1640 CDS AEJP02000028.1 129700 129813 1 + 114 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229930.peg.1641 CDS AEJP02000028.1 129813 130466 3 + 654 Substrate-specific component NikM of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229930.peg.1642 CDS AEJP02000028.1 130463 131128 2 + 666 Transmembrane component NikQ of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229930.peg.1643 CDS AEJP02000028.1 131125 131748 1 + 624 ATPase component NikO of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229930.peg.1644 CDS AEJP02000028.1 131827 132636 1 + 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229930.peg.1645 CDS AEJP02000028.1 132663 133775 3 + 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229930.peg.1646 CDS AEJP02000028.1 133775 134710 2 + 936 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229930.peg.1647 CDS AEJP02000028.1 134754 134906 3 + 153 hypothetical protein - none -
fig|6666666.229930.peg.1648 CDS AEJP02000028.1 138471 137587 -3 - 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229930.peg.1649 CDS AEJP02000028.1 139713 138646 -3 - 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229930.peg.1650 CDS AEJP02000028.1 140836 139718 -1 - 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229930.peg.1651 CDS AEJP02000028.1 141143 142540 2 + 1398 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229930.peg.1652 CDS AEJP02000028.1 143746 142685 -1 - 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229930.peg.1653 CDS AEJP02000028.1 144461 143733 -2 - 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229930.peg.1654 CDS AEJP02000028.1 145304 144540 -2 - 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229930.peg.1655 CDS AEJP02000028.1 145531 146310 1 + 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229930.peg.1656 CDS AEJP02000028.1 146531 147874 2 + 1344 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229930.peg.1657 CDS AEJP02000028.1 148537 147941 -1 - 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229930.peg.1658 CDS AEJP02000028.1 149574 148546 -3 - 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229930.peg.1659 CDS AEJP02000028.1 150707 149583 -2 - 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229930.peg.1660 CDS AEJP02000028.1 151159 150707 -1 - 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229930.peg.1661 CDS AEJP02000028.1 152337 151276 -3 - 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229930.peg.1662 CDS AEJP02000028.1 153262 152357 -1 - 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229930.peg.1663 CDS AEJP02000028.1 153724 154743 1 + 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229930.peg.1664 CDS AEJP02000028.1 155286 155765 3 + 480 FIG00698611: hypothetical protein - none -
fig|6666666.229930.peg.1665 CDS AEJP02000028.1 156856 155921 -1 - 936 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229930.peg.1666 CDS AEJP02000028.1 157112 157579 2 + 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229930.peg.1667 CDS AEJP02000028.1 157603 158490 1 + 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229930.peg.1668 CDS AEJP02000028.1 158681 159262 2 + 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.1669 CDS AEJP02000028.1 159262 159852 1 + 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.1670 CDS AEJP02000028.1 159853 161805 1 + 1953 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.1671 CDS AEJP02000028.1 161816 162895 2 + 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.1672 CDS AEJP02000028.1 162902 163522 2 + 621 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.1673 CDS AEJP02000028.1 163515 164300 3 + 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229930.peg.1674 CDS AEJP02000028.1 164447 165082 2 + 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229930.peg.1675 CDS AEJP02000028.1 165107 166474 2 + 1368 sodium-dependent transporter - none -
fig|6666666.229930.peg.1676 CDS AEJP02000028.1 167654 166869 -2 - 786 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229930.peg.1677 CDS AEJP02000028.1 168439 167666 -1 - 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229930.peg.1678 CDS AEJP02000028.1 168628 170160 1 + 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229930.peg.1679 CDS AEJP02000028.1 171026 170268 -2 - 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229930.peg.1680 CDS AEJP02000028.1 171961 171038 -1 - 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229930.peg.1681 CDS AEJP02000028.1 172934 171969 -2 - 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229930.peg.1682 CDS AEJP02000028.1 173893 172994 -1 - 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229930.peg.1683 CDS AEJP02000028.1 174148 173966 -1 - 183 hypothetical protein - none -
fig|6666666.229930.peg.1684 CDS AEJP02000028.1 174125 176098 2 + 1974 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229930.peg.1685 CDS AEJP02000028.1 177089 176172 -2 - 918 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229930.peg.1686 CDS AEJP02000028.1 177462 177878 3 + 417 Protein ygiW precursor - none -
fig|6666666.229930.peg.1687 CDS AEJP02000028.1 178016 178423 2 + 408 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229930.peg.1688 CDS AEJP02000029.1 1121 117 -2 - 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229930.peg.1689 CDS AEJP02000029.1 1251 1135 -3 - 117 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229930.peg.1690 CDS AEJP02000029.1 2167 1244 -1 - 924 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229930.peg.1691 CDS AEJP02000029.1 3478 2177 -1 - 1302 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229930.peg.1692 CDS AEJP02000029.1 3623 3465 -2 - 159 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229930.peg.1693 CDS AEJP02000029.1 3948 4901 3 + 954 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229930.peg.1694 CDS AEJP02000029.1 4951 6507 1 + 1557 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229930.peg.1695 CDS AEJP02000029.1 7342 6614 -1 - 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229930.peg.1696 CDS AEJP02000029.1 8648 7419 -2 - 1230 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229930.peg.1697 CDS AEJP02000029.1 8844 10247 3 + 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn;
tRNA modification Archaea
fig|6666666.229930.peg.1698 CDS AEJP02000029.1 10871 10410 -2 - 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229930.peg.1699 CDS AEJP02000029.1 11494 10883 -1 - 612 Stringent starvation protein A Carbon Starvation
fig|6666666.229930.peg.1700 CDS AEJP02000029.1 12179 11724 -2 - 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229930.peg.1701 CDS AEJP02000029.1 12428 12180 -2 - 249 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229930.peg.1702 CDS AEJP02000029.1 12949 12428 -1 - 522 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229930.peg.1703 CDS AEJP02000029.1 13975 12962 -1 - 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229930.peg.1704 CDS AEJP02000029.1 14563 15213 1 + 651 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229930.peg.1705 CDS AEJP02000029.1 16270 15278 -1 - 993 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229930.peg.1706 CDS AEJP02000029.1 16453 16749 1 + 297 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229930.peg.1707 CDS AEJP02000029.1 16750 17157 1 + 408 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229930.peg.1708 CDS AEJP02000029.1 18698 17241 -2 - 1458 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis;
tRNA modification Archaea;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA modification Bacteria
fig|6666666.229930.peg.1709 CDS AEJP02000029.1 19004 20104 2 + 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229930.peg.1710 CDS AEJP02000029.1 20165 22645 2 + 2481 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229930.peg.1711 CDS AEJP02000029.1 23495 22716 -2 - 780 Protein of unknown function DUF419 - none -
fig|6666666.229930.peg.1712 CDS AEJP02000029.1 23725 25182 1 + 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229930.peg.1713 CDS AEJP02000029.1 25397 25651 2 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229930.peg.1714 CDS AEJP02000029.1 25648 25800 1 + 153 StbE replicon stabilization toxin - none -
fig|6666666.229930.peg.1715 CDS AEJP02000029.1 25784 25930 2 + 147 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229930.peg.1716 CDS AEJP02000029.1 26728 25943 -1 - 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229930.peg.1717 CDS AEJP02000029.1 27281 26889 -2 - 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229930.peg.1718 CDS AEJP02000029.1 27726 27298 -3 - 429 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.229930.peg.1719 CDS AEJP02000029.1 28564 27968 -1 - 597 hypothetical protein - none -
fig|6666666.229930.peg.1720 CDS AEJP02000029.1 30556 28577 -1 - 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229930.peg.1721 CDS AEJP02000029.1 34221 30556 -3 - 3666 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229930.peg.1722 CDS AEJP02000029.1 34648 34292 -1 - 357 DsrE-related protein - none -
fig|6666666.229930.peg.1723 CDS AEJP02000029.1 35603 35073 -2 - 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229930.peg.1724 CDS AEJP02000029.1 37530 35746 -3 - 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229930.peg.1725 CDS AEJP02000029.1 37677 38123 3 + 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229930.peg.1726 CDS AEJP02000029.1 38398 38189 -1 - 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229930.peg.1727 CDS AEJP02000029.1 38750 38589 -2 - 162 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229930.peg.1728 CDS AEJP02000029.1 39516 38803 -3 - 714 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229930.peg.1729 CDS AEJP02000029.1 39827 39513 -2 - 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229930.peg.1730 CDS AEJP02000029.1 39934 40716 1 + 783 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229930.peg.1731 CDS AEJP02000029.1 40725 41564 3 + 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229930.peg.1732 CDS AEJP02000029.1 42652 41612 -1 - 1041 Phosphoglycerate transport system transcriptional regulatory protein PgtA Phosphoglycerate transport system
fig|6666666.229930.peg.1733 CDS AEJP02000029.1 42861 42658 -3 - 204 Phosphoglycerate transport system transcriptional regulatory protein PgtA Phosphoglycerate transport system
fig|6666666.229930.peg.1734 CDS AEJP02000029.1 44836 42854 -1 - 1983 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229930.peg.1735 CDS AEJP02000029.1 45819 44833 -3 - 987 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229930.peg.1736 CDS AEJP02000029.1 46022 46444 2 + 423 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229930.peg.1737 CDS AEJP02000029.1 47108 46572 -2 - 537 Putative transporting ATPase - none -
fig|6666666.229930.peg.1738 CDS AEJP02000029.1 49157 47205 -2 - 1953 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229930.peg.1739 CDS AEJP02000029.1 49893 49264 -3 - 630 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229930.peg.1740 CDS AEJP02000029.1 50852 50028 -2 - 825 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229930.peg.1741 CDS AEJP02000029.1 51302 50904 -2 - 399 DNA-binding protein H-NS - none -
fig|6666666.229930.peg.1742 CDS AEJP02000029.1 51743 53275 2 + 1533 Na+/H+ antiporter - none -
fig|6666666.229930.peg.1743 CDS AEJP02000030.1 277 504 1 + 228 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229930.peg.1744 CDS AEJP02000030.1 582 827 3 + 246 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229930.peg.1745 CDS AEJP02000030.1 1471 1355 -1 - 117 hypothetical protein - none -
fig|6666666.229930.peg.1746 CDS AEJP02000030.1 1611 1471 -3 - 141 hypothetical protein - none -
fig|6666666.229930.peg.1747 CDS AEJP02000032.1 434 231 -2 - 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229930.peg.1748 CDS AEJP02000032.1 1453 521 -1 - 933 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin biosynthesis;
Biotin synthesis cluster;
Biotin synthesis cluster
fig|6666666.229930.peg.1749 CDS AEJP02000032.1 1595 3061 2 + 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.229930.peg.1750 CDS AEJP02000032.1 3418 4359 1 + 942 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229930.peg.1751 CDS AEJP02000032.1 4529 5356 2 + 828 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229930.peg.1752 CDS AEJP02000032.1 5385 6722 3 + 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229930.peg.1753 CDS AEJP02000032.1 6735 7202 3 + 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229930.peg.1754 CDS AEJP02000032.1 7426 7962 1 + 537 FIG00696317: hypothetical protein - none -
fig|6666666.229930.peg.1755 CDS AEJP02000032.1 8656 7994 -1 - 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229930.peg.1756 CDS AEJP02000032.1 8740 8991 1 + 252 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229930.peg.1757 CDS AEJP02000032.1 9897 9388 -3 - 510 probable lipoprotein NlpC - none -
fig|6666666.229930.peg.1758 CDS AEJP02000032.1 10931 10077 -2 - 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation;
KDO2-Lipid A biosynthesis
fig|6666666.229930.peg.1759 CDS AEJP02000032.1 11840 10941 -2 - 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229930.peg.1760 CDS AEJP02000032.1 12962 11880 -2 - 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229930.peg.1761 CDS AEJP02000032.1 13556 13101 -2 - 456 Outer membrane lipoprotein - none -
fig|6666666.229930.peg.1762 CDS AEJP02000032.1 14185 13598 -1 - 588 Protein yecM - none -
fig|6666666.229930.peg.1763 CDS AEJP02000032.1 14282 16015 2 + 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229930.peg.1764 CDS AEJP02000032.1 17808 16375 -3 - 1434 Putative GTP-binding protein YdgA - none -
fig|6666666.229930.peg.1765 CDS AEJP02000032.1 18094 19995 1 + 1902 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229930.peg.1766 CDS AEJP02000032.1 20430 21557 3 + 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229930.peg.1767 CDS AEJP02000032.1 21862 21635 -1 - 228 Programmed cell death toxin ChpB - none -
fig|6666666.229930.peg.1768 CDS AEJP02000032.1 23058 22006 -3 - 1053 Outer membrane protein P2 precursor (OMP P2) - none -
fig|6666666.229930.peg.1769 CDS AEJP02000032.1 24462 23272 -3 - 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229930.peg.1770 CDS AEJP02000032.1 24717 25274 3 + 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.1771 CDS AEJP02000032.1 26113 26313 1 + 201 Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like - none -
fig|6666666.229930.peg.1772 CDS AEJP02000032.1 26300 26626 2 + 327 FIG00698325: hypothetical protein - none -
fig|6666666.229930.peg.1773 CDS AEJP02000032.1 28319 27759 -2 - 561 Cytolethal distending toxin subunit C Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229930.peg.1774 CDS AEJP02000032.1 29181 28330 -3 - 852 Cytolethal distending toxin subunit B Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229930.peg.1775 CDS AEJP02000032.1 29864 29196 -2 - 669 Cytolethal distending toxin subunit A Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229930.peg.1776 CDS AEJP02000032.1 30349 30134 -1 - 216 Virulence plasmid protein - none -
fig|6666666.229930.peg.1777 CDS AEJP02000032.1 31075 30449 -1 - 627 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229930.peg.1778 CDS AEJP02000032.1 31738 31091 -1 - 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229930.peg.1779 CDS AEJP02000032.1 33330 31855 -3 - 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229930.peg.1780 CDS AEJP02000032.1 33469 34989 1 + 1521 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229930.peg.1781 CDS AEJP02000032.1 35003 35968 2 + 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229930.peg.1782 CDS AEJP02000032.1 36056 37354 2 + 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229930.peg.1783 CDS AEJP02000032.1 37709 37419 -2 - 291 hypothetical protein - none -
fig|6666666.229930.peg.1784 CDS AEJP02000032.1 38715 37732 -3 - 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229930.peg.1785 CDS AEJP02000032.1 39003 40535 3 + 1533 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229930.peg.1786 CDS AEJP02000032.1 41801 40605 -2 - 1197 Sugar efflux transporter SotB - none -
fig|6666666.229930.peg.1787 CDS AEJP02000032.1 43005 41803 -3 - 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229930.peg.1788 CDS AEJP02000032.1 43590 43006 -3 - 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229930.peg.1789 CDS AEJP02000032.1 44250 43600 -3 - 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229930.peg.1790 CDS AEJP02000032.1 44559 45599 3 + 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229930.peg.1791 CDS AEJP02000032.1 46052 46804 2 + 753 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229930.peg.1792 CDS AEJP02000032.1 46832 48889 2 + 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229930.peg.1793 CDS AEJP02000032.1 48905 49951 2 + 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229930.peg.1794 CDS AEJP02000032.1 50230 52341 1 + 2112 unknown - none -
fig|6666666.229930.peg.1795 CDS AEJP02000032.1 53194 52394 -1 - 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229930.peg.1796 CDS AEJP02000032.1 53345 54085 2 + 741 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229930.peg.1797 CDS AEJP02000032.1 54147 54620 3 + 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229930.peg.1798 CDS AEJP02000032.1 54674 55888 2 + 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229930.peg.1799 CDS AEJP02000032.1 55948 56331 1 + 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Archaea;
tRNA modification Bacteria
fig|6666666.229930.peg.1800 CDS AEJP02000032.1 56463 56786 3 + 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229930.peg.1801 CDS AEJP02000032.1 56798 57319 2 + 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229930.peg.1802 CDS AEJP02000032.1 57340 59199 1 + 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229930.peg.1803 CDS AEJP02000032.1 59211 59552 3 + 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229930.peg.1804 CDS AEJP02000032.1 59552 59746 2 + 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229930.peg.1805 CDS AEJP02000032.1 61940 59880 -2 - 2061 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229930.peg.1806 CDS AEJP02000032.1 62113 63225 1 + 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229930.peg.1807 CDS AEJP02000032.1 63322 63203 -1 - 120 hypothetical protein - none -
fig|6666666.229930.peg.1808 CDS AEJP02000032.1 64460 63315 -2 - 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229930.peg.1809 CDS AEJP02000032.1 65021 64596 -2 - 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229930.peg.1810 CDS AEJP02000032.1 66340 65033 -1 - 1308 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229930.peg.1811 CDS AEJP02000032.1 66505 66383 -1 - 123 hypothetical protein - none -
fig|6666666.229930.peg.1812 CDS AEJP02000032.1 66560 66778 2 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229930.peg.1813 CDS AEJP02000032.1 68385 66841 -3 - 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229930.peg.1814 CDS AEJP02000032.1 69673 68777 -1 - 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229930.peg.1815 CDS AEJP02000032.1 69753 69881 3 + 129 hypothetical protein - none -
fig|6666666.229930.peg.1816 CDS AEJP02000032.1 69919 70926 1 + 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229930.peg.1817 CDS AEJP02000032.1 70966 71253 1 + 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229930.peg.1818 CDS AEJP02000032.1 71250 72125 3 + 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229930.peg.1819 CDS AEJP02000032.1 72140 73642 2 + 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229930.peg.1820 CDS AEJP02000032.1 73836 75248 3 + 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229930.peg.1821 CDS AEJP02000032.1 75235 76668 1 + 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229930.peg.1822 CDS AEJP02000032.1 76947 78446 3 + 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229930.peg.1823 CDS AEJP02000032.1 79742 78711 -2 - 1032 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229930.peg.1824 CDS AEJP02000032.1 80890 79736 -1 - 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229930.peg.1825 CDS AEJP02000032.1 81937 80957 -1 - 981 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229930.peg.1826 CDS AEJP02000032.1 82251 83264 3 + 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229930.peg.1827 CDS AEJP02000032.1 83479 84438 1 + 960 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229930.peg.1828 CDS AEJP02000032.1 84545 84814 2 + 270 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229930.peg.1829 CDS AEJP02000032.1 84836 86083 2 + 1248 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229930.peg.1830 CDS AEJP02000032.1 86102 86785 2 + 684 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229930.peg.1831 CDS AEJP02000032.1 86767 87114 1 + 348 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229930.peg.1832 CDS AEJP02000032.1 89035 87188 -1 - 1848 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229930.peg.1833 CDS AEJP02000032.1 89061 89195 3 + 135 hypothetical protein - none -
fig|6666666.229930.peg.1834 CDS AEJP02000032.1 90396 89176 -3 - 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229930.peg.1835 CDS AEJP02000032.1 90566 92584 2 + 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229930.peg.1836 CDS AEJP02000032.1 92774 94360 2 + 1587 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229930.peg.1837 CDS AEJP02000032.1 94360 95844 1 + 1485 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229930.peg.1838 CDS AEJP02000032.1 96533 95955 -2 - 579 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229930.peg.1839 CDS AEJP02000032.1 96501 96629 3 + 129 hypothetical protein - none -
fig|6666666.229930.peg.1840 CDS AEJP02000032.1 96674 97591 2 + 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229930.peg.1841 CDS AEJP02000032.1 97665 99341 3 + 1677 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229930.peg.1842 CDS AEJP02000032.1 100006 99359 -1 - 648 Outer membrane protein W precursor - none -
fig|6666666.229930.peg.1843 CDS AEJP02000032.1 100092 100244 3 + 153 hypothetical protein - none -
fig|6666666.229930.peg.1844 CDS AEJP02000032.1 100278 101036 3 + 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229930.peg.1845 CDS AEJP02000032.1 101042 101593 2 + 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229930.peg.1846 CDS AEJP02000032.1 101597 102067 2 + 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229930.peg.1847 CDS AEJP02000032.1 102070 102366 1 + 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229930.peg.1848 CDS AEJP02000032.1 102893 105109 2 + 2217 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229930.peg.1849 CDS AEJP02000032.1 105142 105450 1 + 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229930.peg.1850 CDS AEJP02000032.1 105428 106201 2 + 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229930.peg.1851 CDS AEJP02000032.1 106712 106458 -2 - 255 hypothetical protein - none -
fig|6666666.229930.peg.1852 CDS AEJP02000032.1 107234 106896 -2 - 339 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.229930.peg.1853 CDS AEJP02000032.1 107393 107262 -2 - 132 hypothetical protein - none -
fig|6666666.229930.peg.1854 CDS AEJP02000032.1 109344 107407 -3 - 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229930.peg.1855 CDS AEJP02000032.1 109978 109376 -1 - 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229930.peg.1856 CDS AEJP02000032.1 110506 110063 -1 - 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229930.peg.1857 CDS AEJP02000032.1 110577 111647 3 + 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229930.peg.1858 CDS AEJP02000032.1 111718 112611 1 + 894 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229930.peg.1859 CDS AEJP02000032.1 112611 113600 3 + 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229930.peg.1860 CDS AEJP02000032.1 113600 114583 2 + 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229930.peg.1861 CDS AEJP02000032.1 114583 115350 1 + 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229930.peg.1862 CDS AEJP02000032.1 116387 115416 -2 - 972 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229930.peg.1863 CDS AEJP02000032.1 116695 118503 1 + 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229930.peg.1864 CDS AEJP02000032.1 118508 119278 2 + 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229930.peg.1865 CDS AEJP02000032.1 119290 119682 1 + 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229930.peg.1866 CDS AEJP02000032.1 119692 120036 1 + 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229930.peg.1867 CDS AEJP02000032.1 122280 120133 -3 - 2148 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229930.peg.1868 CDS AEJP02000032.1 122551 123579 1 + 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229930.peg.1869 CDS AEJP02000032.1 124872 123658 -3 - 1215 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.229930.peg.1870 CDS AEJP02000032.1 125695 124997 -1 - 699 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229930.peg.1871 CDS AEJP02000032.1 125866 125729 -1 - 138 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229930.peg.1872 CDS AEJP02000032.1 126050 126514 2 + 465 FIG00710847: hypothetical protein - none -
fig|6666666.229930.peg.1873 CDS AEJP02000032.1 126487 127311 1 + 825 FIG00711691: hypothetical protein - none -
fig|6666666.229930.peg.1874 CDS AEJP02000032.1 128646 127822 -3 - 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229930.peg.1875 CDS AEJP02000032.1 129320 128697 -2 - 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229930.peg.1876 CDS AEJP02000032.1 130246 129566 -1 - 681 FIG009095: D,D-carboxypeptidase family protein CBSS-584.1.peg.1352
fig|6666666.229930.peg.1877 CDS AEJP02000032.1 131381 130248 -2 - 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229930.peg.1878 CDS AEJP02000032.1 131862 131518 -3 - 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352
fig|6666666.229930.peg.1879 CDS AEJP02000032.1 133808 131928 -2 - 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229930.peg.1880 CDS AEJP02000032.1 135102 133942 -3 - 1161 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229930.peg.1881 CDS AEJP02000032.1 136217 135300 -2 - 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) KDO2-Lipid A biosynthesis
fig|6666666.229930.peg.1882 CDS AEJP02000032.1 137538 136255 -3 - 1284 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229930.peg.1883 CDS AEJP02000032.1 138866 137622 -2 - 1245 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229930.peg.1884 CDS AEJP02000032.1 139694 138927 -2 - 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229930.peg.1885 CDS AEJP02000032.1 140620 139691 -1 - 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229930.peg.1886 CDS AEJP02000032.1 142063 140633 -1 - 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229930.peg.1887 CDS AEJP02000032.1 143198 142134 -2 - 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229930.peg.1888 CDS AEJP02000032.1 144429 143239 -3 - 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229930.peg.1889 CDS AEJP02000032.1 145748 144444 -2 - 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229930.peg.1890 CDS AEJP02000032.1 146860 145775 -1 - 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229930.peg.1891 CDS AEJP02000032.1 148233 146854 -3 - 1380 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229930.peg.1892 CDS AEJP02000032.1 149706 148240 -3 - 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229930.peg.1893 CDS AEJP02000032.1 151547 149724 -2 - 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229930.peg.1894 CDS AEJP02000032.1 151882 151565 -1 - 318 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229930.peg.1895 CDS AEJP02000032.1 152850 151882 -3 - 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229930.peg.1896 CDS AEJP02000032.1 153418 152960 -1 - 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229930.peg.1897 CDS AEJP02000032.1 155280 153682 -3 - 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229930.peg.1898 CDS AEJP02000032.1 155463 155585 3 + 123 hypothetical protein - none -
fig|6666666.229930.peg.1899 CDS AEJP02000032.1 156506 155820 -2 - 687 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229930.peg.1900 CDS AEJP02000032.1 157168 156506 -1 - 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229930.peg.1901 CDS AEJP02000032.1 157892 157173 -2 - 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229930.peg.1902 CDS AEJP02000032.1 158647 157913 -1 - 735 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229930.peg.1903 CDS AEJP02000032.1 159372 158788 -3 - 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229930.peg.1904 CDS AEJP02000032.1 162932 159474 -2 - 3459 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229930.peg.1905 CDS AEJP02000032.1 163559 163386 -2 - 174 hypothetical protein - none -
fig|6666666.229930.peg.1906 CDS AEJP02000032.1 165523 163601 -1 - 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Archaea;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229930.peg.1907 CDS AEJP02000032.1 166228 165527 -1 - 702 unknown - none -
fig|6666666.229930.peg.1908 CDS AEJP02000032.1 166854 166390 -3 - 465 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229930.peg.1909 CDS AEJP02000032.1 167090 166842 -2 - 249 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229930.peg.1910 CDS AEJP02000032.1 167604 167834 3 + 231 Flp pilus assembly protein, pilin Flp Widespread colonization island
fig|6666666.229930.peg.1911 CDS AEJP02000032.1 168277 168603 1 + 327 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229930.peg.1912 CDS AEJP02000032.1 168655 169479 1 + 825 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229930.peg.1913 CDS AEJP02000032.1 169481 170863 2 + 1383 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229930.peg.1914 CDS AEJP02000032.1 170860 171363 1 + 504 Flp pilus assembly protein RcpB Widespread colonization island
fig|6666666.229930.peg.1915 CDS AEJP02000032.1 171379 172503 1 + 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229930.peg.1916 CDS AEJP02000032.1 172517 173797 2 + 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229930.peg.1917 CDS AEJP02000032.1 173797 174684 1 + 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229930.peg.1918 CDS AEJP02000032.1 174681 175547 3 + 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229930.peg.1919 CDS AEJP02000032.1 175537 176298 1 + 762 Flp pilus assembly protein TadD, contains TPR repeat Widespread colonization island
fig|6666666.229930.peg.1920 CDS AEJP02000032.1 176953 177531 1 + 579 Flp pilus assembly surface protein TadF, ATP/GTP-binding motif Widespread colonization island
fig|6666666.229930.peg.1921 CDS AEJP02000032.1 177548 179119 2 + 1572 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229930.peg.1922 CDS AEJP02000032.1 180331 180095 -1 - 237 Mobile element protein - none -
fig|6666666.229930.peg.1923 CDS AEJP02000032.1 180491 180375 -2 - 117 hypothetical protein - none -
fig|6666666.229930.peg.1924 CDS AEJP02000032.1 182817 181315 -3 - 1503 Sodium-dependent transporter - none -
fig|6666666.229930.peg.1925 CDS AEJP02000032.1 183232 183507 1 + 276 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Archaea;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229930.peg.1926 CDS AEJP02000032.1 183648 183959 3 + 312 Membrane protein, MgtC/SapB family - none -
fig|6666666.229930.peg.1927 CDS AEJP02000032.1 184900 183998 -1 - 903 hypothetical protein - none -
fig|6666666.229930.peg.1928 CDS AEJP02000032.1 186805 184946 -1 - 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229930.peg.1929 CDS AEJP02000032.1 188196 186802 -3 - 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229930.peg.1930 CDS AEJP02000032.1 188340 190055 3 + 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229930.peg.1931 CDS AEJP02000032.1 190140 190328 3 + 189 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229930.peg.1932 CDS AEJP02000032.1 190368 190622 3 + 255 YgfY COG2938 - none -
fig|6666666.229930.peg.1933 CDS AEJP02000032.1 190755 191330 3 + 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229930.peg.1934 CDS AEJP02000032.1 191369 191953 2 + 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229930.peg.1935 CDS AEJP02000032.1 192671 192919 2 + 249 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229930.peg.1936 CDS AEJP02000032.1 192929 193366 2 + 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229930.peg.1937 CDS AEJP02000032.1 193447 193959 1 + 513 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229930.peg.1938 CDS AEJP02000032.1 196313 194853 -2 - 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229930.peg.1939 CDS AEJP02000032.1 196428 196892 3 + 465 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229930.peg.1940 CDS AEJP02000032.1 199325 196983 -2 - 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229930.peg.1941 CDS AEJP02000032.1 199951 199391 -1 - 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229930.peg.1942 CDS AEJP02000032.1 200150 200755 2 + 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229930.peg.1943 CDS AEJP02000032.1 202058 200808 -2 - 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229930.peg.1944 CDS AEJP02000032.1 202195 202076 -1 - 120 hypothetical protein - none -
fig|6666666.229930.peg.1945 CDS AEJP02000032.1 202318 202632 1 + 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229930.peg.1946 CDS AEJP02000032.1 202629 204518 3 + 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229930.peg.1947 CDS AEJP02000032.1 204615 207035 3 + 2421 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229930.peg.1948 CDS AEJP02000032.1 208004 207090 -2 - 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229930.peg.1949 CDS AEJP02000033.1 1335 1970 3 + 636 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229930.peg.1950 CDS AEJP02000033.1 2885 2037 -2 - 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229930.peg.1951 CDS AEJP02000033.1 3384 3070 -3 - 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229930.peg.1952 CDS AEJP02000033.1 3609 3400 -3 - 210 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229930.peg.1953 CDS AEJP02000033.1 6142 4439 -1 - 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229930.peg.1954 CDS AEJP02000033.1 6188 6352 2 + 165 hypothetical protein - none -
fig|6666666.229930.peg.1955 CDS AEJP02000033.1 6418 6702 1 + 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229930.peg.1956 CDS AEJP02000033.1 6736 9222 1 + 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229930.peg.1957 CDS AEJP02000033.1 9249 10109 3 + 861 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229930.peg.1958 CDS AEJP02000033.1 10109 10990 2 + 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229930.peg.1959 CDS AEJP02000033.1 11028 11477 3 + 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229930.peg.1960 CDS AEJP02000033.1 11491 12126 1 + 636 Cytochrome c-type protein NapC - none -
fig|6666666.229930.peg.1961 CDS AEJP02000033.1 14107 12212 -1 - 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229930.peg.1962 CDS AEJP02000033.1 15268 14225 -1 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229930.peg.1963 CDS AEJP02000033.1 16415 15288 -2 - 1128 Fic family protein - none -
fig|6666666.229930.peg.1964 CDS AEJP02000033.1 17511 16585 -3 - 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229930.peg.1965 CDS AEJP02000033.1 17533 17652 1 + 120 hypothetical protein - none -
fig|6666666.229930.peg.1966 CDS AEJP02000033.1 17790 18566 3 + 777 Protein HI0205 precursor - none -
fig|6666666.229930.peg.1967 CDS AEJP02000033.1 18593 20407 2 + 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229930.peg.1968 CDS AEJP02000033.1 20659 20513 -1 - 147 hypothetical protein - none -
fig|6666666.229930.peg.1969 CDS AEJP02000033.1 21219 21097 -3 - 123 hypothetical protein - none -
fig|6666666.229930.peg.1970 CDS AEJP02000033.1 24035 21234 -2 - 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229930.peg.1971 CDS AEJP02000033.1 24252 24815 3 + 564 Outer membrane protein 18/16 - none -
fig|6666666.229930.peg.1972 CDS AEJP02000033.1 24919 25149 1 + 231 FIG00696102: hypothetical protein - none -
fig|6666666.229930.peg.1973 CDS AEJP02000033.1 25159 27174 1 + 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229930.peg.1974 CDS AEJP02000033.1 28070 27690 -2 - 381 FIG00782409: hypothetical protein - none -
fig|6666666.229930.peg.1975 CDS AEJP02000033.1 28199 28801 2 + 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229930.peg.1976 CDS AEJP02000033.1 28801 29406 1 + 606 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229930.peg.1977 CDS AEJP02000033.1 29409 29894 3 + 486 Putative membrane protein - none -
fig|6666666.229930.peg.1978 CDS AEJP02000033.1 30108 30614 3 + 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229930.peg.1979 CDS AEJP02000033.1 30784 30936 1 + 153 hypothetical protein - none -
fig|6666666.229930.peg.1980 CDS AEJP02000033.1 31592 30933 -2 - 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229930.peg.1981 CDS AEJP02000033.1 31973 32662 2 + 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229930.peg.1982 CDS AEJP02000033.1 33435 32737 -3 - 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229930.peg.1983 CDS AEJP02000033.1 33547 33419 -1 - 129 hypothetical protein - none -
fig|6666666.229930.peg.1984 CDS AEJP02000033.1 33534 34865 3 + 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229930.peg.1985 CDS AEJP02000033.1 35336 36637 2 + 1302 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229930.peg.1986 CDS AEJP02000033.1 36696 38096 3 + 1401 USG protein - none -
fig|6666666.229930.peg.1987 CDS AEJP02000033.1 38609 39253 2 + 645 hypothetical protein - none -
fig|6666666.229930.peg.1988 CDS AEJP02000033.1 39973 39341 -1 - 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229930.peg.1989 CDS AEJP02000033.1 40144 41469 1 + 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229930.peg.1990 CDS AEJP02000033.1 41484 41624 3 + 141 hypothetical protein - none -
fig|6666666.229930.peg.1991 CDS AEJP02000033.1 41880 41587 -3 - 294 AagD - none -
fig|6666666.229930.peg.1992 CDS AEJP02000033.1 43118 41883 -2 - 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229930.peg.1993 CDS AEJP02000033.1 45043 43127 -1 - 1917 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229930.peg.1994 CDS AEJP02000033.1 47446 45059 -1 - 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229930.peg.1995 CDS AEJP02000033.1 47731 47588 -1 - 144 hypothetical protein - none -
fig|6666666.229930.peg.1996 CDS AEJP02000033.1 48468 47749 -3 - 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229930.peg.1997 CDS AEJP02000033.1 49844 48594 -2 - 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229930.peg.1998 CDS AEJP02000033.1 51311 50136 -2 - 1176 Cof protein - none -
fig|6666666.229930.peg.1999 CDS AEJP02000033.1 52257 51421 -3 - 837 PTS system, mannose-specific IID component - none -
fig|6666666.229930.peg.2000 CDS AEJP02000033.1 53068 52271 -1 - 798 PTS system, mannose-specific IIC component - none -
fig|6666666.229930.peg.2001 CDS AEJP02000033.1 54051 53086 -3 - 966 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229930.peg.2002 CDS AEJP02000033.1 54922 54338 -1 - 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229930.peg.2003 CDS AEJP02000033.1 55010 56371 2 + 1362 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229930.peg.2004 CDS AEJP02000033.1 56546 57550 2 + 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229930.peg.2005 CDS AEJP02000033.1 58281 57637 -3 - 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229930.peg.2006 CDS AEJP02000033.1 59734 58961 -1 - 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229930.peg.2007 CDS AEJP02000033.1 60337 59810 -1 - 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229930.peg.2008 CDS AEJP02000033.1 60499 61743 1 + 1245 Tryptophan-specific transport protein - none -
fig|6666666.229930.peg.2009 CDS AEJP02000033.1 62023 62340 1 + 318 hypothetical protein - none -
fig|6666666.229930.peg.2010 CDS AEJP02000033.1 63429 62722 -3 - 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229930.peg.2011 CDS AEJP02000033.1 63644 64171 2 + 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229930.peg.2012 CDS AEJP02000033.1 64192 65523 1 + 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229930.peg.2013 CDS AEJP02000033.1 65589 67172 3 + 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229930.peg.2014 CDS AEJP02000033.1 67238 68014 2 + 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229930.peg.2015 CDS AEJP02000033.1 68032 68526 1 + 495 Protein yfbU - none -
fig|6666666.229930.peg.2016 CDS AEJP02000033.1 69294 68611 -3 - 684 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229930.peg.2017 CDS AEJP02000033.1 69600 71258 3 + 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229930.peg.2018 CDS AEJP02000033.1 71509 72726 1 + 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229930.peg.2019 CDS AEJP02000033.1 72723 73550 3 + 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229930.peg.2020 CDS AEJP02000033.1 74266 73562 -1 - 705 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein CBSS-203122.12.peg.188;
CBSS-203122.12.peg.188
fig|6666666.229930.peg.2021 CDS AEJP02000033.1 74402 75064 2 + 663 FIGfam050825 CBSS-203122.12.peg.188
fig|6666666.229930.peg.2022 CDS AEJP02000033.1 75057 76976 3 + 1920 TniA putative transposase CBSS-203122.12.peg.188
fig|6666666.229930.peg.2023 CDS AEJP02000033.1 76976 77773 2 + 798 TniB NTP-binding protein CBSS-203122.12.peg.188
fig|6666666.229930.peg.2024 CDS AEJP02000033.1 77827 78945 1 + 1119 Mll9366 protein CBSS-203122.12.peg.188
fig|6666666.229930.peg.2025 CDS AEJP02000033.1 78942 80357 3 + 1416 FIGfam110555 CBSS-203122.12.peg.188
fig|6666666.229930.peg.2026 CDS AEJP02000033.1 81185 82765 2 + 1581 Recombinase - none -
fig|6666666.229930.peg.2027 CDS AEJP02000033.1 82998 83555 3 + 558 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229930.peg.2028 CDS AEJP02000033.1 83590 84402 1 + 813 Bll0873 protein - none -
fig|6666666.229930.peg.2029 CDS AEJP02000033.1 84646 84521 -1 - 126 hypothetical protein - none -
fig|6666666.229930.peg.2030 CDS AEJP02000033.1 85739 85224 -2 - 516 hypothetical protein - none -
fig|6666666.229930.peg.2031 CDS AEJP02000033.1 91718 85743 -2 - 5976 VgrG protein - none -
fig|6666666.229930.peg.2032 CDS AEJP02000033.1 91990 92649 1 + 660 Methyltransferase - none -
fig|6666666.229930.peg.2033 CDS AEJP02000033.1 92665 93492 1 + 828 Thermostable 8-oxoguanine DNA glycosylase - none -
fig|6666666.229930.peg.2034 CDS AEJP02000033.1 95976 94729 -3 - 1248 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229930.peg.2035 CDS AEJP02000033.1 98312 96564 -2 - 1749 hypothetical protein - none -
fig|6666666.229930.peg.2036 CDS AEJP02000033.1 99217 98414 -1 - 804 MG(2+) CHELATASE FAMILY PROTEIN CBSS-203122.12.peg.188
fig|6666666.229930.peg.2037 CDS AEJP02000033.1 99946 99332 -1 - 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229930.peg.2038 CDS AEJP02000033.1 99956 100069 2 + 114 hypothetical protein - none -
fig|6666666.229930.peg.2039 CDS AEJP02000033.1 100079 100954 2 + 876 Membrane protein LAPB - none -
fig|6666666.229930.peg.2040 CDS AEJP02000033.1 101526 101050 -3 - 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) Biotin synthesis cluster;
RNA methylation
fig|6666666.229930.peg.2041 CDS AEJP02000033.1 102142 101645 -1 - 498 Phospholipid-binding protein - none -
fig|6666666.229930.peg.2042 CDS AEJP02000033.1 103090 102248 -1 - 843 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229930.peg.2043 CDS AEJP02000033.1 103802 103125 -2 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229930.peg.2044 CDS AEJP02000033.1 104829 103792 -3 - 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229930.peg.2045 CDS AEJP02000033.1 105026 105583 2 + 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229930.peg.2046 CDS AEJP02000034.1 42 1184 3 + 1143 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229930.rna.1 RNA AEJP02000004.1 148 220 1 + 73 tRNA-Glu-TTC - none -
fig|6666666.229930.rna.2 RNA AEJP02000005.1 189 3231 3 + 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229930.rna.3 RNA AEJP02000005.1 3497 3612 2 + 116 5S RNA - none -
fig|6666666.229930.rna.4 RNA AEJP02000008.1 123462 123390 -3 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.229930.rna.5 RNA AEJP02000008.1 125272 125344 1 + 73 tRNA-Val-TAC - none -
fig|6666666.229930.rna.6 RNA AEJP02000008.1 125386 125458 1 + 73 tRNA-Val-TAC - none -
fig|6666666.229930.rna.7 RNA AEJP02000008.1 125489 125561 2 + 73 tRNA-Val-TAC - none -
fig|6666666.229930.rna.8 RNA AEJP02000010.1 20027 20109 2 + 83 tRNA-Leu-CAA tRNAs
fig|6666666.229930.rna.9 RNA AEJP02000011.1 4627 4555 -1 - 73 tRNA-Asn-GTT - none -
fig|6666666.229930.rna.10 RNA AEJP02000011.1 4707 4635 -3 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.229930.rna.11 RNA AEJP02000012.1 431 341 -2 - 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229930.rna.12 RNA AEJP02000014.1 1457 1 -2 - 1457 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229930.rna.13 RNA AEJP02000018.1 70029 69956 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229930.rna.14 RNA AEJP02000018.1 94657 94586 -1 - 72 tRNA-Gln-TTG - none -
fig|6666666.229930.rna.15 RNA AEJP02000018.1 94769 94698 -2 - 72 tRNA-Gln-TTG - none -
fig|6666666.229930.rna.16 RNA AEJP02000018.1 94883 94802 -2 - 82 tRNA-Leu-TAG - none -
fig|6666666.229930.rna.17 RNA AEJP02000018.1 94965 94892 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229930.rna.18 RNA AEJP02000019.1 35540 35613 2 + 74 tRNA-Asp-GTC - none -
fig|6666666.229930.rna.19 RNA AEJP02000019.1 35639 35712 2 + 74 tRNA-Asp-GTC - none -
fig|6666666.229930.rna.20 RNA AEJP02000019.1 77878 77805 -1 - 74 tRNA-Lys-CTT - none -
fig|6666666.229930.rna.21 RNA AEJP02000019.1 77979 77907 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.229930.rna.22 RNA AEJP02000019.1 125991 125905 -3 - 87 tRNA-Ser-TGA - none -
fig|6666666.229930.rna.23 RNA AEJP02000019.1 133346 133418 2 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229930.rna.24 RNA AEJP02000019.1 133430 133500 2 + 71 tRNA-Cys-GCA tRNAs
fig|6666666.229930.rna.25 RNA AEJP02000019.1 141732 141659 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229930.rna.26 RNA AEJP02000022.1 13765 13693 -1 - 73 tRNA-Asn-GTT - none -
fig|6666666.229930.rna.27 RNA AEJP02000022.1 63699 63772 3 + 74 tRNA-Arg-CCG tRNAs
fig|6666666.229930.rna.28 RNA AEJP02000022.1 63807 63879 3 + 73 tRNA-His-GTG - none -
fig|6666666.229930.rna.29 RNA AEJP02000022.1 63885 63958 3 + 74 tRNA-Pro-TGG - none -
fig|6666666.229930.rna.30 RNA AEJP02000023.1 44328 44414 3 + 87 tRNA-Ser-GGA tRNAs
fig|6666666.229930.rna.31 RNA AEJP02000023.1 63034 62962 -1 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.229930.rna.32 RNA AEJP02000023.1 63145 63072 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.229930.rna.33 RNA AEJP02000023.1 63271 63152 -1 - 120 5S RNA - none -
fig|6666666.229930.rna.34 RNA AEJP02000023.1 63409 63318 -1 - 92 5S RNA - none -
fig|6666666.229930.rna.35 RNA AEJP02000025.1 201 128 -3 - 74 tRNA-Arg-TCT - none -
fig|6666666.229930.rna.36 RNA AEJP02000025.1 311 238 -2 - 74 tRNA-Pro-TGG - none -
fig|6666666.229930.rna.37 RNA AEJP02000027.1 82 155 1 + 74 tRNA-Ile-GAT - none -
fig|6666666.229930.rna.38 RNA AEJP02000027.1 208 280 1 + 73 tRNA-Ala-TGC - none -
fig|6666666.229930.rna.39 RNA AEJP02000028.1 22254 22182 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229930.rna.40 RNA AEJP02000029.1 34889 34816 -2 - 74 tRNA-Val-GAC tRNAs
fig|6666666.229930.rna.41 RNA AEJP02000032.1 25435 25507 1 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229930.rna.42 RNA AEJP02000032.1 25512 25595 3 + 84 tRNA-Leu-TAA - none -
fig|6666666.229930.rna.43 RNA AEJP02000032.1 25651 25723 1 + 73 tRNA-Lys-TTT - none -
fig|6666666.229930.rna.44 RNA AEJP02000032.1 78611 78528 -2 - 84 tRNA-Leu-CAG tRNAs
fig|6666666.229930.rna.45 RNA AEJP02000032.1 106880 106798 -2 - 83 tRNA-Leu-GAG tRNAs
fig|6666666.229930.rna.46 RNA AEJP02000032.1 179389 179462 1 + 74 tRNA-Met-CAT - none -
fig|6666666.229930.rna.47 RNA AEJP02000032.1 208260 208332 3 + 73 tRNA-Thr-TGT - none -
fig|6666666.229930.rna.48 RNA AEJP02000032.1 208366 208447 1 + 82 tRNA-Tyr-GTA - none -
fig|6666666.229930.rna.49 RNA AEJP02000032.1 208491 208562 3 + 72 tRNA-Gly-TCC - none -
fig|6666666.229930.rna.50 RNA AEJP02000032.1 208569 208641 3 + 73 tRNA-Thr-GGT - none -
fig|6666666.229930.rna.51 RNA AEJP02000033.1 27300 27390 3 + 91 tRNA-Ser-GCT - none -
fig|6666666.229930.rna.52 RNA AEJP02000033.1 27411 27484 3 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.229930.rna.53 RNA AEJP02000033.1 27542 27615 2 + 74 tRNA-Arg-ACG tRNAs