fig|6666666.229931.peg.1 CDS AEJR02000001.1 1791 157 -3 - 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229931.peg.2 CDS AEJR02000001.1 1905 3320 3 + 1416 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229931.peg.3 CDS AEJR02000001.1 3469 3630 1 + 162 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Riboflavin synthesis cluster
fig|6666666.229931.peg.4 CDS AEJR02000001.1 4401 3817 -3 - 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229931.peg.5 CDS AEJR02000001.1 5204 4518 -2 - 687 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.229931.peg.6 CDS AEJR02000001.1 5350 6162 1 + 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229931.peg.7 CDS AEJR02000001.1 6346 7458 1 + 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229931.peg.8 CDS AEJR02000001.1 8112 7531 -3 - 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229931.peg.9 CDS AEJR02000001.1 8377 10947 1 + 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229931.peg.10 CDS AEJR02000001.1 11076 10957 -3 - 120 hypothetical protein - none -
fig|6666666.229931.peg.11 CDS AEJR02000001.1 11549 11049 -2 - 501 hypothetical protein - none -
fig|6666666.229931.peg.12 CDS AEJR02000001.1 11732 12760 2 + 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229931.peg.13 CDS AEJR02000001.1 12760 12939 1 + 180 hypothetical protein - none -
fig|6666666.229931.peg.14 CDS AEJR02000001.1 13018 13842 1 + 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229931.peg.15 CDS AEJR02000001.1 13852 14742 1 + 891 Tyrosine recombinase XerC - none -
fig|6666666.229931.peg.16 CDS AEJR02000001.1 14756 15469 2 + 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229931.peg.17 CDS AEJR02000001.1 15995 15570 -2 - 426 Excinuclease ATPase subunit - none -
fig|6666666.229931.peg.18 CDS AEJR02000001.1 16023 16346 3 + 324 hypothetical protein - none -
fig|6666666.229931.peg.19 CDS AEJR02000001.1 16376 17119 2 + 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.20 CDS AEJR02000001.1 17104 17892 1 + 789 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.21 CDS AEJR02000001.1 17870 18133 2 + 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.22 CDS AEJR02000001.1 18136 18387 1 + 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.23 CDS AEJR02000001.1 18387 20054 3 + 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.24 CDS AEJR02000001.1 20080 20625 1 + 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.25 CDS AEJR02000001.1 20622 21983 3 + 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.26 CDS AEJR02000001.1 21983 22705 2 + 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.27 CDS AEJR02000001.1 22702 23628 1 + 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.28 CDS AEJR02000001.1 23625 24071 3 + 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.29 CDS AEJR02000001.1 24068 24652 2 + 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.30 CDS AEJR02000001.1 24659 26932 2 + 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.31 CDS AEJR02000001.1 26972 27541 2 + 570 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.32 CDS AEJR02000001.1 27550 28773 1 + 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.33 CDS AEJR02000001.1 28766 29209 2 + 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.34 CDS AEJR02000001.1 29259 29987 3 + 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.35 CDS AEJR02000001.1 30007 31251 1 + 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229931.peg.36 CDS AEJR02000001.1 33116 31662 -2 - 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229931.peg.37 CDS AEJR02000001.1 33137 33283 2 + 147 hypothetical protein - none -
fig|6666666.229931.peg.38 CDS AEJR02000001.1 34130 33672 -2 - 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229931.peg.39 CDS AEJR02000001.1 34464 34210 -3 - 255 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229931.peg.40 CDS AEJR02000001.1 35169 34477 -3 - 693 Aspartate racemase (EC 5.1.1.13) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229931.peg.41 CDS AEJR02000001.1 35712 35284 -3 - 429 FIG00848466: hypothetical protein - none -
fig|6666666.229931.peg.42 CDS AEJR02000001.1 36737 36039 -2 - 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pentose phosphate pathway
fig|6666666.229931.peg.43 CDS AEJR02000001.1 38549 36990 -2 - 1560 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pentose phosphate pathway
fig|6666666.229931.peg.44 CDS AEJR02000001.1 39381 38572 -3 - 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229931.peg.45 CDS AEJR02000001.1 39847 39419 -1 - 429 hypothetical protein - none -
fig|6666666.229931.peg.46 CDS AEJR02000001.1 41915 39909 -2 - 2007 oligopeptide transporter - none -
fig|6666666.229931.peg.47 CDS AEJR02000001.1 42284 42910 2 + 627 membrane protein ykgB - none -
fig|6666666.229931.peg.48 CDS AEJR02000001.1 42981 43862 3 + 882 Transcriptional regulator, AraC family - none -
fig|6666666.229931.peg.49 CDS AEJR02000001.1 44457 43867 -3 - 591 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229931.peg.50 CDS AEJR02000001.1 44496 45155 3 + 660 FIG001957: putative hydrolase CBSS-584.1.peg.3382
fig|6666666.229931.peg.51 CDS AEJR02000001.1 45168 45584 3 + 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) CBSS-584.1.peg.3382;
Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229931.peg.52 CDS AEJR02000001.1 45652 46524 1 + 873 33 kDa chaperonin (Heat shock protein 33) (HSP33) CBSS-584.1.peg.3382
fig|6666666.229931.peg.53 CDS AEJR02000001.1 46927 47151 1 + 225 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229931.peg.54 CDS AEJR02000001.1 47155 47817 1 + 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229931.peg.55 CDS AEJR02000001.1 47855 48619 2 + 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229931.peg.56 CDS AEJR02000001.1 48638 49660 2 + 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229931.peg.57 CDS AEJR02000001.1 51953 49872 -2 - 2082 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229931.peg.58 CDS AEJR02000001.1 52739 52035 -2 - 705 hypothetical protein - none -
fig|6666666.229931.peg.59 CDS AEJR02000001.1 53120 52944 -2 - 177 hypothetical protein - none -
fig|6666666.229931.peg.60 CDS AEJR02000001.1 53547 53287 -3 - 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229931.peg.61 CDS AEJR02000001.1 54502 53597 -1 - 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229931.peg.62 CDS AEJR02000001.1 54855 54694 -3 - 162 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229931.peg.63 CDS AEJR02000001.1 55483 54869 -1 - 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229931.peg.64 CDS AEJR02000001.1 56370 55531 -3 - 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.5.3) - none -
fig|6666666.229931.peg.65 CDS AEJR02000001.1 56995 56372 -1 - 624 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3) - none -
fig|6666666.229931.peg.66 CDS AEJR02000001.1 58361 57006 -2 - 1356 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229931.peg.67 CDS AEJR02000001.1 59043 58345 -3 - 699 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.5.3) - none -
fig|6666666.229931.peg.68 CDS AEJR02000001.1 59318 59178 -2 - 141 hypothetical protein - none -
fig|6666666.229931.peg.69 CDS AEJR02000001.1 60168 60019 -3 - 150 hypothetical protein - none -
fig|6666666.229931.peg.70 CDS AEJR02000001.1 60955 60143 -1 - 813 cell filamentation-like protein - none -
fig|6666666.229931.peg.71 CDS AEJR02000001.1 61115 60936 -2 - 180 hypothetical protein - none -
fig|6666666.229931.peg.72 CDS AEJR02000001.1 61264 61133 -1 - 132 hypothetical protein - none -
fig|6666666.229931.peg.73 CDS AEJR02000001.1 61698 61444 -3 - 255 hypothetical protein - none -
fig|6666666.229931.peg.74 CDS AEJR02000001.1 63710 62952 -2 - 759 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229931.peg.75 CDS AEJR02000001.1 64166 63720 -2 - 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229931.peg.76 CDS AEJR02000001.1 64640 64170 -2 - 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229931.peg.77 CDS AEJR02000001.1 66077 64815 -2 - 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229931.peg.78 CDS AEJR02000001.1 66946 66152 -1 - 795 FIG001154: CcsA-related protein - none -
fig|6666666.229931.peg.79 CDS AEJR02000001.1 67100 68479 2 + 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229931.peg.80 CDS AEJR02000001.1 68863 68630 -1 - 234 hypothetical protein - none -
fig|6666666.229931.peg.81 CDS AEJR02000001.1 69930 69100 -3 - 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229931.peg.82 CDS AEJR02000001.1 71069 69945 -2 - 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229931.peg.83 CDS AEJR02000001.1 71208 71615 3 + 408 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229931.peg.84 CDS AEJR02000001.1 72478 71729 -1 - 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229931.peg.85 CDS AEJR02000001.1 74067 72700 -3 - 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229931.peg.86 CDS AEJR02000001.1 74702 74091 -2 - 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229931.peg.87 CDS AEJR02000001.1 74815 75225 1 + 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229931.peg.88 CDS AEJR02000001.1 75364 75900 1 + 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229931.peg.89 CDS AEJR02000001.1 75967 76899 1 + 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229931.peg.90 CDS AEJR02000001.1 76978 77841 1 + 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229931.peg.91 CDS AEJR02000001.1 77857 78684 1 + 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229931.peg.92 CDS AEJR02000001.1 78772 79182 1 + 411 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229931.peg.93 CDS AEJR02000001.1 79166 79399 2 + 234 Uncharacterized protein HI0073 - none -
fig|6666666.229931.peg.94 CDS AEJR02000001.1 79487 80119 2 + 633 FIG00696423: hypothetical protein - none -
fig|6666666.229931.peg.95 CDS AEJR02000001.1 80073 80198 3 + 126 hypothetical protein - none -
fig|6666666.229931.peg.96 CDS AEJR02000001.1 80240 82828 2 + 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229931.peg.97 CDS AEJR02000001.1 82981 82853 -1 - 129 hypothetical protein - none -
fig|6666666.229931.peg.98 CDS AEJR02000001.1 82970 83473 2 + 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
Lipopolysaccharide assembly
fig|6666666.229931.peg.99 CDS AEJR02000001.1 83473 84507 1 + 1035 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229931.peg.100 CDS AEJR02000001.1 85403 84999 -2 - 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229931.peg.101 CDS AEJR02000001.1 88242 85480 -3 - 2763 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229931.peg.102 CDS AEJR02000001.1 88569 88252 -3 - 318 hypothetical protein - none -
fig|6666666.229931.peg.103 CDS AEJR02000001.1 88661 88972 2 + 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229931.peg.104 CDS AEJR02000001.1 89081 89491 2 + 411 Mercuric resistance operon regulatory protein - none -
fig|6666666.229931.peg.105 CDS AEJR02000001.1 92391 89560 -3 - 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229931.peg.106 CDS AEJR02000001.1 92562 93041 3 + 480 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229931.peg.107 CDS AEJR02000001.1 94001 93147 -2 - 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229931.peg.108 CDS AEJR02000001.1 95092 94004 -1 - 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229931.peg.109 CDS AEJR02000001.1 95643 95116 -3 - 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229931.peg.110 CDS AEJR02000001.1 97266 95857 -3 - 1410 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229931.peg.111 CDS AEJR02000001.1 97678 97286 -1 - 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229931.peg.112 CDS AEJR02000001.1 98202 97678 -3 - 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229931.peg.113 CDS AEJR02000001.1 98717 98199 -2 - 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229931.peg.114 CDS AEJR02000001.1 99537 98728 -3 - 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229931.peg.115 CDS AEJR02000001.1 99671 102238 2 + 2568 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229931.peg.116 CDS AEJR02000001.1 102333 103178 3 + 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229931.peg.117 CDS AEJR02000001.1 103273 104643 1 + 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229931.peg.118 CDS AEJR02000001.1 105420 104776 -3 - 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229931.peg.119 CDS AEJR02000001.1 105676 105458 -1 - 219 FIG00696234: hypothetical protein - none -
fig|6666666.229931.peg.120 CDS AEJR02000001.1 106299 105700 -3 - 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229931.peg.121 CDS AEJR02000001.1 106754 106299 -2 - 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229931.peg.122 CDS AEJR02000001.1 108022 106823 -1 - 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229931.peg.123 CDS AEJR02000001.1 108021 108149 3 + 129 hypothetical protein - none -
fig|6666666.229931.peg.124 CDS AEJR02000001.1 108200 108859 2 + 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229931.peg.125 CDS AEJR02000001.1 109131 109304 3 + 174 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.229931.peg.126 CDS AEJR02000001.1 109316 109486 2 + 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229931.peg.127 CDS AEJR02000001.1 109526 110383 2 + 858 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229931.peg.128 CDS AEJR02000001.1 111369 110386 -3 - 984 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229931.peg.129 CDS AEJR02000001.1 112470 111448 -3 - 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229931.peg.130 CDS AEJR02000001.1 113163 112471 -3 - 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229931.peg.131 CDS AEJR02000001.1 113438 113226 -2 - 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229931.peg.132 CDS AEJR02000001.1 113696 114544 2 + 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229931.peg.133 CDS AEJR02000001.1 114553 115557 1 + 1005 putative capsular polysaccharide synthesis protein - none -
fig|6666666.229931.peg.134 CDS AEJR02000001.1 116427 115564 -3 - 864 Involved in lipopolysaccharide biosynthesis - none -
fig|6666666.229931.peg.135 CDS AEJR02000001.1 116612 118852 2 + 2241 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229931.peg.136 CDS AEJR02000001.1 118962 119774 3 + 813 Cell division protein - none -
fig|6666666.229931.peg.137 CDS AEJR02000001.1 119974 120540 1 + 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229931.peg.138 CDS AEJR02000001.1 120566 121756 2 + 1191 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229931.peg.139 CDS AEJR02000001.1 121770 124868 3 + 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229931.peg.140 CDS AEJR02000001.1 125022 125822 3 + 801 Orf2 - none -
fig|6666666.229931.peg.141 CDS AEJR02000001.1 126475 127422 1 + 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229931.peg.142 CDS AEJR02000001.1 127438 127998 1 + 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229931.peg.143 CDS AEJR02000001.1 128024 128317 2 + 294 COG1872 - none -
fig|6666666.229931.peg.144 CDS AEJR02000001.1 128434 129093 1 + 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229931.peg.145 CDS AEJR02000001.1 129158 131131 2 + 1974 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229931.peg.146 CDS AEJR02000001.1 132038 131301 -2 - 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229931.peg.147 CDS AEJR02000001.1 133014 132040 -3 - 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229931.peg.148 CDS AEJR02000001.1 133121 133909 2 + 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229931.peg.149 CDS AEJR02000001.1 134520 133945 -3 - 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229931.peg.150 CDS AEJR02000001.1 135140 134814 -2 - 327 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229931.peg.151 CDS AEJR02000001.1 135299 135847 2 + 549 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229931.peg.152 CDS AEJR02000001.1 135877 137163 1 + 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229931.peg.153 CDS AEJR02000001.1 137472 137317 -3 - 156 hypothetical protein - none -
fig|6666666.229931.peg.154 CDS AEJR02000001.1 137658 137906 3 + 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229931.peg.155 CDS AEJR02000001.1 137932 138459 1 + 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229931.peg.156 CDS AEJR02000001.1 138525 139274 3 + 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229931.peg.157 CDS AEJR02000001.1 139300 139650 1 + 351 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.229931.peg.158 CDS AEJR02000001.1 140248 139760 -1 - 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229931.peg.159 CDS AEJR02000001.1 141321 140248 -3 - 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229931.peg.160 CDS AEJR02000001.1 142446 141391 -3 - 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229931.peg.161 CDS AEJR02000001.1 142696 145080 1 + 2385 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229931.peg.162 CDS AEJR02000001.1 145099 145836 1 + 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229931.peg.163 CDS AEJR02000001.1 146169 147611 3 + 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229931.peg.164 CDS AEJR02000001.1 147845 148927 2 + 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229931.peg.165 CDS AEJR02000002.1 1138 1263 1 + 126 hypothetical protein - none -
fig|6666666.229931.peg.166 CDS AEJR02000002.1 1302 1937 3 + 636 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229931.peg.167 CDS AEJR02000002.1 2852 2004 -2 - 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229931.peg.168 CDS AEJR02000002.1 3351 3037 -3 - 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229931.peg.169 CDS AEJR02000002.1 4392 3367 -3 - 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229931.peg.170 CDS AEJR02000002.1 6110 4407 -2 - 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229931.peg.171 CDS AEJR02000002.1 6156 6320 3 + 165 hypothetical protein - none -
fig|6666666.229931.peg.172 CDS AEJR02000002.1 6387 6671 3 + 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229931.peg.173 CDS AEJR02000002.1 6705 9191 3 + 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229931.peg.174 CDS AEJR02000002.1 9218 10078 2 + 861 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229931.peg.175 CDS AEJR02000002.1 10078 10959 1 + 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229931.peg.176 CDS AEJR02000002.1 10997 11446 2 + 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229931.peg.177 CDS AEJR02000002.1 11460 12095 3 + 636 Cytochrome c-type protein NapC - none -
fig|6666666.229931.peg.178 CDS AEJR02000002.1 14076 12181 -3 - 1896 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229931.peg.179 CDS AEJR02000002.1 15237 14194 -3 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229931.peg.180 CDS AEJR02000002.1 16384 15257 -1 - 1128 Fic family protein - none -
fig|6666666.229931.peg.181 CDS AEJR02000002.1 17480 16554 -2 - 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229931.peg.182 CDS AEJR02000002.1 17502 17621 3 + 120 hypothetical protein - none -
fig|6666666.229931.peg.183 CDS AEJR02000002.1 17759 18535 2 + 777 Protein HI0205 precursor - none -
fig|6666666.229931.peg.184 CDS AEJR02000002.1 18562 20376 1 + 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229931.peg.185 CDS AEJR02000002.1 20829 20482 -3 - 348 hypothetical protein - none -
fig|6666666.229931.peg.186 CDS AEJR02000002.1 21201 21079 -3 - 123 hypothetical protein - none -
fig|6666666.229931.peg.187 CDS AEJR02000002.1 24017 21216 -2 - 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229931.peg.188 CDS AEJR02000002.1 24234 24797 3 + 564 Outer membrane protein 18/16 - none -
fig|6666666.229931.peg.189 CDS AEJR02000002.1 24901 25131 1 + 231 FIG00696102: hypothetical protein - none -
fig|6666666.229931.peg.190 CDS AEJR02000002.1 25141 27156 1 + 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229931.peg.191 CDS AEJR02000002.1 28052 27672 -2 - 381 FIG00782409: hypothetical protein - none -
fig|6666666.229931.peg.192 CDS AEJR02000002.1 28181 28783 2 + 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229931.peg.193 CDS AEJR02000002.1 28783 29388 1 + 606 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229931.peg.194 CDS AEJR02000002.1 29391 29876 3 + 486 Putative membrane protein - none -
fig|6666666.229931.peg.195 CDS AEJR02000002.1 30089 30595 2 + 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229931.peg.196 CDS AEJR02000002.1 30765 30917 3 + 153 hypothetical protein - none -
fig|6666666.229931.peg.197 CDS AEJR02000002.1 31573 30914 -1 - 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229931.peg.198 CDS AEJR02000002.1 31954 32643 1 + 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229931.peg.199 CDS AEJR02000002.1 33416 32718 -2 - 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229931.peg.200 CDS AEJR02000002.1 33528 33400 -3 - 129 hypothetical protein - none -
fig|6666666.229931.peg.201 CDS AEJR02000002.1 33515 34846 2 + 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229931.peg.202 CDS AEJR02000002.1 35317 36618 1 + 1302 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229931.peg.203 CDS AEJR02000002.1 37048 38076 1 + 1029 USG protein - none -
fig|6666666.229931.peg.204 CDS AEJR02000002.1 38589 39233 3 + 645 hypothetical protein - none -
fig|6666666.229931.peg.205 CDS AEJR02000002.1 39953 39321 -2 - 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229931.peg.206 CDS AEJR02000002.1 40124 41449 2 + 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229931.peg.207 CDS AEJR02000002.1 41477 41599 2 + 123 hypothetical protein - none -
fig|6666666.229931.peg.208 CDS AEJR02000002.1 41860 41567 -1 - 294 AagD - none -
fig|6666666.229931.peg.209 CDS AEJR02000002.1 43098 41863 -3 - 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229931.peg.210 CDS AEJR02000002.1 45023 43107 -2 - 1917 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229931.peg.211 CDS AEJR02000002.1 47426 45039 -2 - 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229931.peg.212 CDS AEJR02000002.1 47711 47568 -2 - 144 hypothetical protein - none -
fig|6666666.229931.peg.213 CDS AEJR02000002.1 48448 47729 -1 - 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229931.peg.214 CDS AEJR02000002.1 49824 48574 -3 - 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229931.peg.215 CDS AEJR02000002.1 51291 50116 -3 - 1176 Cof protein - none -
fig|6666666.229931.peg.216 CDS AEJR02000002.1 52237 51401 -1 - 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229931.peg.217 CDS AEJR02000002.1 53048 52251 -2 - 798 PTS system, mannose-specific IIC component - none -
fig|6666666.229931.peg.218 CDS AEJR02000002.1 54031 53066 -1 - 966 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229931.peg.219 CDS AEJR02000002.1 54902 54318 -2 - 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229931.peg.220 CDS AEJR02000002.1 54990 56351 3 + 1362 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229931.peg.221 CDS AEJR02000002.1 56526 57530 3 + 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229931.peg.222 CDS AEJR02000002.1 58261 57617 -1 - 645 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229931.peg.223 CDS AEJR02000002.1 59714 58941 -2 - 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229931.peg.224 CDS AEJR02000002.1 60317 59790 -2 - 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229931.peg.225 CDS AEJR02000002.1 60479 61723 2 + 1245 Tryptophan-specific transport protein - none -
fig|6666666.229931.peg.226 CDS AEJR02000002.1 62002 62136 1 + 135 hypothetical protein - none -
fig|6666666.229931.peg.227 CDS AEJR02000002.1 62206 62319 1 + 114 hypothetical protein - none -
fig|6666666.229931.peg.228 CDS AEJR02000002.1 63408 62701 -3 - 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229931.peg.229 CDS AEJR02000002.1 63623 64150 2 + 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229931.peg.230 CDS AEJR02000002.1 64171 65502 1 + 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229931.peg.231 CDS AEJR02000002.1 65568 67151 3 + 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229931.peg.232 CDS AEJR02000002.1 67217 67993 2 + 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229931.peg.233 CDS AEJR02000002.1 68011 68505 1 + 495 Protein yfbU - none -
fig|6666666.229931.peg.234 CDS AEJR02000002.1 69273 68590 -3 - 684 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229931.peg.235 CDS AEJR02000002.1 69579 71237 3 + 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229931.peg.236 CDS AEJR02000002.1 71488 72705 1 + 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229931.peg.237 CDS AEJR02000002.1 72702 73529 3 + 828 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229931.peg.238 CDS AEJR02000002.1 74245 73541 -1 - 705 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein CBSS-203122.12.peg.188;
CBSS-203122.12.peg.188
fig|6666666.229931.peg.239 CDS AEJR02000002.1 74507 74797 2 + 291 FIGfam050825 CBSS-203122.12.peg.188
fig|6666666.229931.peg.240 CDS AEJR02000002.1 74757 75725 3 + 969 TniA putative transposase CBSS-203122.12.peg.188
fig|6666666.229931.peg.241 CDS AEJR02000002.1 75725 76618 2 + 894 TniB NTP-binding protein CBSS-203122.12.peg.188
fig|6666666.229931.peg.242 CDS AEJR02000002.1 76576 77694 1 + 1119 Mll9366 protein CBSS-203122.12.peg.188
fig|6666666.229931.peg.243 CDS AEJR02000002.1 77691 79106 3 + 1416 FIGfam110555 CBSS-203122.12.peg.188
fig|6666666.229931.peg.244 CDS AEJR02000002.1 79934 81514 2 + 1581 Recombinase - none -
fig|6666666.229931.peg.245 CDS AEJR02000002.1 81747 82304 3 + 558 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229931.peg.246 CDS AEJR02000002.1 82339 83151 1 + 813 Bll0873 protein - none -
fig|6666666.229931.peg.247 CDS AEJR02000002.1 84488 83973 -2 - 516 hypothetical protein - none -
fig|6666666.229931.peg.248 CDS AEJR02000002.1 87860 84492 -2 - 3369 VgrG protein - none -
fig|6666666.229931.peg.249 CDS AEJR02000002.1 88653 87847 -3 - 807 VgrG protein - none -
fig|6666666.229931.peg.250 CDS AEJR02000002.1 88925 89584 2 + 660 Methyltransferase - none -
fig|6666666.229931.peg.251 CDS AEJR02000002.1 89600 90427 2 + 828 Thermostable 8-oxoguanine DNA glycosylase - none -
fig|6666666.229931.peg.252 CDS AEJR02000002.1 92911 91664 -1 - 1248 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229931.peg.253 CDS AEJR02000002.1 95247 93499 -3 - 1749 hypothetical protein - none -
fig|6666666.229931.peg.254 CDS AEJR02000002.1 96215 95349 -2 - 867 MG(2+) CHELATASE FAMILY PROTEIN CBSS-203122.12.peg.188
fig|6666666.229931.peg.255 CDS AEJR02000002.1 96944 96330 -2 - 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229931.peg.256 CDS AEJR02000002.1 96954 97067 3 + 114 hypothetical protein - none -
fig|6666666.229931.peg.257 CDS AEJR02000002.1 97077 97952 3 + 876 Membrane protein LAPB - none -
fig|6666666.229931.peg.258 CDS AEJR02000002.1 98524 98048 -1 - 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) Biotin synthesis cluster;
RNA methylation
fig|6666666.229931.peg.259 CDS AEJR02000002.1 99140 98643 -2 - 498 Phospholipid-binding protein - none -
fig|6666666.229931.peg.260 CDS AEJR02000002.1 100088 99246 -2 - 843 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229931.peg.261 CDS AEJR02000002.1 100800 100123 -3 - 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229931.peg.262 CDS AEJR02000002.1 101827 100790 -1 - 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229931.peg.263 CDS AEJR02000002.1 102024 102581 3 + 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229931.peg.264 CDS AEJR02000003.1 1583 510 -2 - 1074 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - none -
fig|6666666.229931.peg.265 CDS AEJR02000003.1 1712 2995 2 + 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229931.peg.266 CDS AEJR02000003.1 5662 3071 -1 - 2592 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229931.peg.267 CDS AEJR02000003.1 6528 5728 -3 - 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229931.peg.268 CDS AEJR02000003.1 6662 7003 2 + 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229931.peg.269 CDS AEJR02000003.1 7005 7217 3 + 213 hypothetical protein - none -
fig|6666666.229931.peg.270 CDS AEJR02000003.1 7263 9656 3 + 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229931.peg.271 CDS AEJR02000003.1 9955 11862 1 + 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229931.peg.272 CDS AEJR02000003.1 11905 12426 1 + 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229931.peg.273 CDS AEJR02000003.1 12565 13995 1 + 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229931.peg.274 CDS AEJR02000003.1 13998 15323 3 + 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229931.peg.275 CDS AEJR02000003.1 15334 16449 1 + 1116 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229931.peg.276 CDS AEJR02000003.1 16451 17122 2 + 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229931.peg.277 CDS AEJR02000003.1 17112 17603 3 + 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229931.peg.278 CDS AEJR02000003.1 17610 17921 3 + 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229931.peg.279 CDS AEJR02000003.1 18249 18914 3 + 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229931.peg.280 CDS AEJR02000003.1 19078 18920 -1 - 159 hypothetical protein - none -
fig|6666666.229931.peg.281 CDS AEJR02000003.1 20254 19106 -1 - 1149 Mobile element protein - none -
fig|6666666.229931.peg.282 CDS AEJR02000003.1 21406 20354 -1 - 1053 putative inner membrane protein - none -
fig|6666666.229931.peg.283 CDS AEJR02000003.1 25625 21714 -2 - 3912 HrpA-like helicases - none -
fig|6666666.229931.peg.284 CDS AEJR02000003.1 26011 25622 -1 - 390 COG2363 - none -
fig|6666666.229931.peg.285 CDS AEJR02000003.1 26464 26012 -1 - 453 putative membrane protein - none -
fig|6666666.229931.peg.286 CDS AEJR02000003.1 26918 26589 -2 - 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229931.peg.287 CDS AEJR02000003.1 28297 27260 -1 - 1038 Outer membrane protein A precursor Osmoregulation
fig|6666666.229931.peg.288 CDS AEJR02000003.1 28783 31836 1 + 3054 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229931.peg.289 CDS AEJR02000003.1 31846 32268 1 + 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229931.peg.290 CDS AEJR02000003.1 32261 33325 2 + 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229931.peg.291 CDS AEJR02000003.1 33366 33866 3 + 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229931.peg.292 CDS AEJR02000003.1 35216 34071 -2 - 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229931.peg.293 CDS AEJR02000003.1 36075 35272 -3 - 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229931.peg.294 CDS AEJR02000003.1 37108 36230 -1 - 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229931.peg.295 CDS AEJR02000003.1 37987 37118 -1 - 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229931.peg.296 CDS AEJR02000003.1 38884 37997 -1 - 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229931.peg.297 CDS AEJR02000003.1 39599 38898 -2 - 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229931.peg.298 CDS AEJR02000003.1 39840 40826 3 + 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229931.peg.299 CDS AEJR02000003.1 40890 42740 3 + 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229931.peg.300 CDS AEJR02000003.1 42879 44009 3 + 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229931.peg.301 CDS AEJR02000003.1 44259 45725 3 + 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229931.peg.302 CDS AEJR02000003.1 47471 46401 -2 - 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229931.peg.303 CDS AEJR02000003.1 49740 47698 -3 - 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229931.peg.304 CDS AEJR02000003.1 51383 50352 -2 - 1032 putative membrane protein - none -
fig|6666666.229931.peg.305 CDS AEJR02000003.1 52063 51398 -1 - 666 putative exported protein - none -
fig|6666666.229931.peg.306 CDS AEJR02000003.1 52466 54112 2 + 1647 ABC transporter ATP-binding protein - none -
fig|6666666.229931.peg.307 CDS AEJR02000003.1 55103 54216 -2 - 888 putative adhesin/invasin - none -
fig|6666666.229931.peg.308 CDS AEJR02000003.1 55606 57504 1 + 1899 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229931.peg.309 CDS AEJR02000003.1 58041 60296 3 + 2256 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229931.peg.310 CDS AEJR02000003.1 60580 61191 1 + 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229931.peg.311 CDS AEJR02000003.1 61952 61242 -2 - 711 hypothetical protein - none -
fig|6666666.229931.peg.312 CDS AEJR02000003.1 62635 61958 -1 - 678 FIG00904286: hypothetical protein - none -
fig|6666666.229931.peg.313 CDS AEJR02000003.1 62776 63129 1 + 354 Bona fide RidA/YjgF/TdcF/RutC subgroup - none -
fig|6666666.229931.peg.314 CDS AEJR02000003.1 64044 63199 -3 - 846 hypothetical protein - none -
fig|6666666.229931.peg.315 CDS AEJR02000003.1 65487 64717 -3 - 771 Glycosyltransferase - none -
fig|6666666.229931.peg.316 CDS AEJR02000003.1 66703 65813 -1 - 891 hypothetical protein - none -
fig|6666666.229931.peg.317 CDS AEJR02000003.1 68751 66706 -3 - 2046 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229931.peg.318 CDS AEJR02000003.1 69395 68784 -2 - 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229931.peg.319 CDS AEJR02000003.1 70373 69417 -2 - 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229931.peg.320 CDS AEJR02000003.1 71256 70489 -3 - 768 Putative membrane protein YfcA - none -
fig|6666666.229931.peg.321 CDS AEJR02000003.1 72132 71260 -3 - 873 Murein endopeptidase - none -
fig|6666666.229931.peg.322 CDS AEJR02000003.1 73227 72154 -3 - 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229931.peg.323 CDS AEJR02000003.1 76572 73249 -3 - 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229931.peg.324 CDS AEJR02000003.1 77996 76581 -2 - 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229931.peg.325 CDS AEJR02000003.1 78619 78002 -1 - 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229931.peg.326 CDS AEJR02000003.1 78706 79506 1 + 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229931.peg.327 CDS AEJR02000003.1 79938 80462 3 + 525 Flavodoxin 1 Flavodoxin
fig|6666666.229931.peg.328 CDS AEJR02000003.1 80481 80921 3 + 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229931.peg.329 CDS AEJR02000003.1 81089 83752 2 + 2664 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229931.peg.330 CDS AEJR02000003.1 83820 84170 3 + 351 FIG00782386: hypothetical protein - none -
fig|6666666.229931.peg.331 CDS AEJR02000003.1 84521 84204 -2 - 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229931.peg.332 CDS AEJR02000003.1 85219 84527 -1 - 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229931.peg.333 CDS AEJR02000003.1 86385 85249 -3 - 1137 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229931.peg.334 CDS AEJR02000003.1 86735 86439 -2 - 297 Inner membrane protein yciS - none -
fig|6666666.229931.peg.335 CDS AEJR02000003.1 87121 86834 -1 - 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229931.peg.336 CDS AEJR02000003.1 88829 87183 -2 - 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229931.peg.337 CDS AEJR02000003.1 89604 88927 -3 - 678 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229931.peg.338 CDS AEJR02000003.1 90490 89597 -1 - 894 Membrane protein LAPB - none -
fig|6666666.229931.peg.339 CDS AEJR02000003.1 90783 93149 3 + 2367 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229931.peg.340 CDS AEJR02000003.1 93227 96001 2 + 2775 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229931.peg.341 CDS AEJR02000003.1 96400 96068 -1 - 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229931.peg.342 CDS AEJR02000003.1 97012 96401 -1 - 612 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229931.peg.343 CDS AEJR02000003.1 97128 97009 -3 - 120 hypothetical protein - none -
fig|6666666.229931.peg.344 CDS AEJR02000003.1 98065 97133 -1 - 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229931.peg.345 CDS AEJR02000003.1 98365 100638 1 + 2274 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229931.peg.346 CDS AEJR02000003.1 101358 101173 -3 - 186 FIG074102: hypothetical protein - none -
fig|6666666.229931.peg.347 CDS AEJR02000003.1 102043 101345 -1 - 699 Putative cytoplasmic protein - none -
fig|6666666.229931.peg.348 CDS AEJR02000003.1 105088 102332 -1 - 2757 helicase (Snf2/Rad54 family) - none -
fig|6666666.229931.peg.349 CDS AEJR02000003.1 105484 105305 -1 - 180 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229931.peg.350 CDS AEJR02000003.1 105881 106027 2 + 147 hypothetical protein - none -
fig|6666666.229931.peg.351 CDS AEJR02000003.1 106038 106700 3 + 663 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229931.peg.352 CDS AEJR02000003.1 106786 107115 1 + 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) CBSS-326442.4.peg.1852;
Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229931.peg.353 CDS AEJR02000003.1 107213 108094 2 + 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229931.peg.354 CDS AEJR02000003.1 108094 108984 1 + 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229931.peg.355 CDS AEJR02000003.1 108984 109841 3 + 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229931.peg.356 CDS AEJR02000003.1 109838 110686 2 + 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229931.peg.357 CDS AEJR02000003.1 110933 110661 -2 - 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229931.peg.358 CDS AEJR02000003.1 111078 111752 3 + 675 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229931.peg.359 CDS AEJR02000003.1 111815 112273 2 + 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229931.peg.360 CDS AEJR02000003.1 112273 112746 1 + 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229931.peg.361 CDS AEJR02000003.1 112755 114896 3 + 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229931.peg.362 CDS AEJR02000003.1 115399 114893 -1 - 507 FIG001674: hypothetical protein - none -
fig|6666666.229931.peg.363 CDS AEJR02000003.1 115462 116412 1 + 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p - none -
fig|6666666.229931.peg.364 CDS AEJR02000003.1 117523 116579 -1 - 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229931.peg.365 CDS AEJR02000003.1 118337 117513 -2 - 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229931.peg.366 CDS AEJR02000003.1 119555 118347 -2 - 1209 FIG00732228: membrane protein - none -
fig|6666666.229931.peg.367 CDS AEJR02000003.1 119701 119564 -1 - 138 FIG00732228: membrane protein - none -
fig|6666666.229931.peg.368 CDS AEJR02000003.1 119987 119718 -2 - 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229931.peg.369 CDS AEJR02000003.1 121215 120217 -3 - 999 FIG00781545: hypothetical protein - none -
fig|6666666.229931.peg.370 CDS AEJR02000003.1 121751 121476 -2 - 276 ABC transporter ATP-binding protein - none -
fig|6666666.229931.peg.371 CDS AEJR02000003.1 123417 121741 -3 - 1677 ABC transporter ATP-binding protein - none -
fig|6666666.229931.peg.372 CDS AEJR02000003.1 124811 123459 -2 - 1353 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.229931.peg.373 CDS AEJR02000003.1 125505 124813 -3 - 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229931.peg.374 CDS AEJR02000003.1 125864 125505 -2 - 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229931.peg.375 CDS AEJR02000003.1 126334 126834 1 + 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229931.peg.376 CDS AEJR02000003.1 126840 128036 3 + 1197 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229931.peg.377 CDS AEJR02000003.1 128033 128413 2 + 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229931.peg.378 CDS AEJR02000003.1 129887 128457 -2 - 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229931.peg.379 CDS AEJR02000003.1 130001 130936 2 + 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229931.peg.380 CDS AEJR02000003.1 131557 130994 -1 - 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229931.peg.381 CDS AEJR02000003.1 132168 131557 -3 - 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229931.peg.382 CDS AEJR02000003.1 132623 132177 -2 - 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229931.peg.383 CDS AEJR02000003.1 133573 132647 -1 - 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229931.peg.384 CDS AEJR02000003.1 134916 134095 -3 - 822 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229931.peg.385 CDS AEJR02000003.1 136718 138100 2 + 1383 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229931.peg.386 CDS AEJR02000003.1 139345 138188 -1 - 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229931.peg.387 CDS AEJR02000003.1 141104 139428 -2 - 1677 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229931.peg.388 CDS AEJR02000003.1 141704 141147 -2 - 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229931.peg.389 CDS AEJR02000003.1 142459 141719 -1 - 741 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.229931.peg.390 CDS AEJR02000003.1 143418 142462 -3 - 957 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229931.peg.391 CDS AEJR02000003.1 144398 143415 -2 - 984 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229931.peg.392 CDS AEJR02000003.1 144474 145292 3 + 819 Aldose 1-epimerase - none -
fig|6666666.229931.peg.393 CDS AEJR02000003.1 145702 146559 1 + 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229931.peg.394 CDS AEJR02000003.1 146619 147572 3 + 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229931.peg.395 CDS AEJR02000003.1 147678 149441 3 + 1764 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229931.peg.396 CDS AEJR02000003.1 149441 151174 2 + 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229931.peg.397 CDS AEJR02000003.1 152420 151635 -2 - 786 serine/threonine protein kinase - none -
fig|6666666.229931.peg.398 CDS AEJR02000003.1 152962 152441 -1 - 522 unknown - none -
fig|6666666.229931.peg.399 CDS AEJR02000003.1 153164 153748 2 + 585 Putative lipoprotein yceB precursor - none -
fig|6666666.229931.peg.400 CDS AEJR02000003.1 154135 154398 1 + 264 Mobile element protein - none -
fig|6666666.229931.peg.401 CDS AEJR02000003.1 155438 154524 -2 - 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229931.peg.402 CDS AEJR02000003.1 156216 155488 -3 - 729 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229931.peg.403 CDS AEJR02000003.1 156305 156958 2 + 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229931.peg.404 CDS AEJR02000003.1 157237 157977 1 + 741 FIG00698611: hypothetical protein - none -
fig|6666666.229931.peg.405 CDS AEJR02000003.1 158663 158139 -2 - 525 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229931.peg.406 CDS AEJR02000003.1 159166 158624 -1 - 543 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229931.peg.407 CDS AEJR02000003.1 159985 159191 -1 - 795 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229931.peg.408 CDS AEJR02000003.1 160788 159985 -3 - 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229931.peg.409 CDS AEJR02000003.1 162747 161329 -3 - 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229931.peg.410 CDS AEJR02000003.1 163666 162710 -1 - 957 O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-) - none -
fig|6666666.229931.peg.411 CDS AEJR02000003.1 164548 163676 -1 - 873 Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.229931.peg.412 CDS AEJR02000003.1 165640 164606 -1 - 1035 Exopolysaccharide production protein ExoZ - none -
fig|6666666.229931.peg.413 CDS AEJR02000003.1 166456 165644 -1 - 813 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229931.peg.414 CDS AEJR02000003.1 168359 166461 -2 - 1899 Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L- rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.229931.peg.415 CDS AEJR02000003.1 169017 168367 -3 - 651 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) Rhamnose containing glycans
fig|6666666.229931.peg.416 CDS AEJR02000003.1 169901 169116 -2 - 786 O-antigen export system permease protein RfbD - none -
fig|6666666.229931.peg.417 CDS AEJR02000003.1 170455 169913 -1 - 543 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229931.peg.418 CDS AEJR02000003.1 171342 170458 -3 - 885 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229931.peg.419 CDS AEJR02000003.1 172216 171344 -1 - 873 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229931.peg.420 CDS AEJR02000003.1 173361 172294 -3 - 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229931.peg.421 CDS AEJR02000003.1 174562 173432 -1 - 1131 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229931.peg.422 CDS AEJR02000003.1 174429 174575 3 + 147 hypothetical protein - none -
fig|6666666.229931.peg.423 CDS AEJR02000003.1 175373 174564 -2 - 810 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229931.peg.424 CDS AEJR02000003.1 176323 175442 -1 - 882 Glycosyltransferase - none -
fig|6666666.229931.peg.425 CDS AEJR02000003.1 177516 176323 -3 - 1194 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229931.peg.426 CDS AEJR02000003.1 178301 177525 -2 - 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229931.peg.427 CDS AEJR02000003.1 178432 179982 1 + 1551 putative flippase - none -
fig|6666666.229931.peg.428 CDS AEJR02000003.1 179979 180935 3 + 957 Polysaccharide polymerization protein - none -
fig|6666666.229931.peg.429 CDS AEJR02000003.1 181044 181295 3 + 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229931.peg.430 CDS AEJR02000003.1 181292 181546 2 + 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229931.peg.431 CDS AEJR02000003.1 181559 182302 2 + 744 Probable transmembrane protein - none -
fig|6666666.229931.peg.432 CDS AEJR02000003.1 182275 182436 1 + 162 hypothetical protein - none -
fig|6666666.229931.peg.433 CDS AEJR02000003.1 182596 183306 1 + 711 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229931.peg.434 CDS AEJR02000003.1 185613 183439 -3 - 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229931.peg.435 CDS AEJR02000003.1 187130 185781 -2 - 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229931.peg.436 CDS AEJR02000003.1 187348 187866 1 + 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism
fig|6666666.229931.peg.437 CDS AEJR02000003.1 187985 187863 -2 - 123 hypothetical protein - none -
fig|6666666.229931.peg.438 CDS AEJR02000003.1 188934 187936 -3 - 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229931.peg.439 CDS AEJR02000003.1 189690 188983 -3 - 708 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229931.peg.440 CDS AEJR02000003.1 190114 190266 1 + 153 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase;
Selenocysteine metabolism
fig|6666666.229931.peg.441 CDS AEJR02000003.1 190343 193138 2 + 2796 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229931.peg.442 CDS AEJR02000003.1 193236 194066 3 + 831 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229931.peg.443 CDS AEJR02000003.1 194059 194772 1 + 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229931.peg.444 CDS AEJR02000003.1 194929 195045 1 + 117 hypothetical protein - none -
fig|6666666.229931.peg.445 CDS AEJR02000003.1 197685 195400 -3 - 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229931.peg.446 CDS AEJR02000003.1 197981 198580 2 + 600 Hydrogenase-4 component A - none -
fig|6666666.229931.peg.447 CDS AEJR02000003.1 198613 200634 1 + 2022 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229931.peg.448 CDS AEJR02000003.1 200645 201607 2 + 963 Hydrogenase-4 component C - none -
fig|6666666.229931.peg.449 CDS AEJR02000003.1 201620 203065 2 + 1446 Hydrogenase-4 component D - none -
fig|6666666.229931.peg.450 CDS AEJR02000003.1 203076 203714 3 + 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229931.peg.451 CDS AEJR02000003.1 203719 205257 1 + 1539 Hydrogenase-4 component F - none -
fig|6666666.229931.peg.452 CDS AEJR02000003.1 205277 207007 2 + 1731 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229931.peg.453 CDS AEJR02000003.1 207021 207668 3 + 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229931.peg.454 CDS AEJR02000003.1 207665 208441 2 + 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229931.peg.455 CDS AEJR02000003.1 208576 208980 1 + 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229931.peg.456 CDS AEJR02000003.1 208970 209431 2 + 462 Hydrogenase 3 maturation protease (EC 3.4.-.-) - none -
fig|6666666.229931.peg.457 CDS AEJR02000003.1 209939 212161 2 + 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229931.peg.460 CDS AEJR02000003.1 212472 212332 -3 - 141 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229931.peg.461 CDS AEJR02000003.1 214271 213102 -2 - 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229931.peg.462 CDS AEJR02000003.1 215681 214458 -2 - 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229931.peg.463 CDS AEJR02000003.1 218614 215807 -1 - 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229931.peg.464 CDS AEJR02000003.1 218699 218821 2 + 123 hypothetical protein - none -
fig|6666666.229931.peg.465 CDS AEJR02000003.1 219531 218893 -3 - 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229931.peg.466 CDS AEJR02000003.1 220054 219608 -1 - 447 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229931.peg.467 CDS AEJR02000003.1 221741 220233 -2 - 1509 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229931.peg.468 CDS AEJR02000003.1 223876 221819 -1 - 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229931.peg.469 CDS AEJR02000003.1 224558 223950 -2 - 609 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229931.peg.470 CDS AEJR02000003.1 224776 226059 1 + 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229931.peg.471 CDS AEJR02000003.1 226022 228679 2 + 2658 Paraquat-inducible protein B Oxidative stress
fig|6666666.229931.peg.472 CDS AEJR02000003.1 229999 228755 -1 - 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229931.peg.473 CDS AEJR02000003.1 230263 231381 1 + 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229931.peg.474 CDS AEJR02000003.1 231365 232225 2 + 861 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229931.peg.475 CDS AEJR02000003.1 232225 232998 1 + 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229931.peg.476 CDS AEJR02000003.1 233129 234226 2 + 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229931.peg.477 CDS AEJR02000003.1 234348 235244 3 + 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229931.peg.478 CDS AEJR02000003.1 235342 235229 -1 - 114 hypothetical protein - none -
fig|6666666.229931.peg.479 CDS AEJR02000003.1 236639 235323 -2 - 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229931.peg.480 CDS AEJR02000003.1 236947 238614 1 + 1668 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229931.peg.481 CDS AEJR02000003.1 240451 239111 -1 - 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229931.peg.482 CDS AEJR02000003.1 241081 240464 -1 - 618 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229931.peg.483 CDS AEJR02000003.1 243918 241174 -3 - 2745 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229931.peg.484 CDS AEJR02000003.1 244401 243922 -3 - 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229931.peg.485 CDS AEJR02000003.1 246313 244940 -1 - 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229931.peg.486 CDS AEJR02000003.1 247470 246316 -3 - 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229931.peg.487 CDS AEJR02000003.1 247635 248315 3 + 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229931.peg.488 CDS AEJR02000003.1 248341 249606 1 + 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229931.peg.489 CDS AEJR02000003.1 249675 250286 3 + 612 SH3 domain protein - none -
fig|6666666.229931.peg.490 CDS AEJR02000003.1 250286 251590 2 + 1305 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229931.peg.491 CDS AEJR02000003.1 251625 252248 3 + 624 Outer membrane lipoprotein LolB precursor - none -
fig|6666666.229931.peg.492 CDS AEJR02000003.1 252248 253159 2 + 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229931.peg.493 CDS AEJR02000003.1 253200 254150 3 + 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229931.peg.494 CDS AEJR02000003.1 254327 254473 2 + 147 hypothetical protein - none -
fig|6666666.229931.peg.495 CDS AEJR02000003.1 254779 255924 1 + 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229931.peg.496 CDS AEJR02000003.1 256167 257756 3 + 1590 L-lactate permease Lactate utilization
fig|6666666.229931.peg.497 CDS AEJR02000003.1 258243 257911 -3 - 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229931.peg.498 CDS AEJR02000003.1 258268 258384 1 + 117 hypothetical protein - none -
fig|6666666.229931.peg.499 CDS AEJR02000003.1 258443 259525 2 + 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229931.peg.500 CDS AEJR02000003.1 259552 260697 1 + 1146 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229931.peg.501 CDS AEJR02000003.1 260708 262039 2 + 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229931.peg.502 CDS AEJR02000003.1 262585 262118 -1 - 468 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229931.peg.503 CDS AEJR02000003.1 262653 263414 3 + 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229931.peg.504 CDS AEJR02000003.1 263862 264116 3 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229931.peg.505 CDS AEJR02000003.1 264106 264396 1 + 291 StbE replicon stabilization toxin - none -
fig|6666666.229931.peg.506 CDS AEJR02000003.1 264792 264454 -3 - 339 conserved hypothetical protein - none -
fig|6666666.229931.peg.507 CDS AEJR02000003.1 265220 265585 2 + 366 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229931.peg.508 CDS AEJR02000003.1 265756 267144 1 + 1389 Putative protease - none -
fig|6666666.229931.peg.509 CDS AEJR02000003.1 267441 268532 3 + 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229931.peg.510 CDS AEJR02000003.1 269712 268576 -3 - 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229931.peg.511 CDS AEJR02000003.1 270185 271336 2 + 1152 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229931.peg.512 CDS AEJR02000003.1 271627 271926 1 + 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229931.peg.513 CDS AEJR02000003.1 271990 273807 1 + 1818 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229931.peg.514 CDS AEJR02000003.1 273824 274789 2 + 966 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229931.peg.515 CDS AEJR02000003.1 275009 277636 2 + 2628 Iron siderophore receptor protein - none -
fig|6666666.229931.peg.516 CDS AEJR02000003.1 277883 277707 -2 - 177 hypothetical protein - none -
fig|6666666.229931.peg.517 CDS AEJR02000003.1 277986 280607 3 + 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229931.peg.518 CDS AEJR02000003.1 281643 280690 -3 - 954 Inositol transport system permease protein - none -
fig|6666666.229931.peg.519 CDS AEJR02000003.1 281822 281694 -2 - 129 Inositol transport system ATP-binding protein - none -
fig|6666666.229931.peg.520 CDS AEJR02000003.1 281821 282690 1 + 870 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) - none -
fig|6666666.229931.peg.521 CDS AEJR02000003.1 283306 282794 -1 - 513 Mannitol operon repressor Mannitol Utilization
fig|6666666.229931.peg.522 CDS AEJR02000003.1 284532 283384 -3 - 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229931.peg.523 CDS AEJR02000003.1 286490 284610 -2 - 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229931.peg.524 CDS AEJR02000003.1 288237 286804 -3 - 1434 Microcin H47 secretion protein - none -
fig|6666666.229931.peg.525 CDS AEJR02000003.1 290375 288252 -2 - 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229931.peg.526 CDS AEJR02000003.1 293611 290444 -1 - 3168 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229931.peg.527 CDS AEJR02000003.1 294130 293624 -1 - 507 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229931.peg.528 CDS AEJR02000003.1 296499 295237 -3 - 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis
fig|6666666.229931.peg.529 CDS AEJR02000003.1 297176 296634 -2 - 543 hypothetical protein - none -
fig|6666666.229931.peg.530 CDS AEJR02000003.1 297706 297557 -1 - 150 hypothetical protein - none -
fig|6666666.229931.peg.531 CDS AEJR02000003.1 298797 297793 -3 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229931.peg.532 CDS AEJR02000003.1 298853 299302 2 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229931.peg.533 CDS AEJR02000003.1 299312 299755 2 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial
fig|6666666.229931.peg.534 CDS AEJR02000003.1 303173 299757 -2 - 3417 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229931.peg.535 CDS AEJR02000003.1 303487 303185 -1 - 303 FIG00696353: hypothetical protein - none -
fig|6666666.229931.peg.536 CDS AEJR02000003.1 304157 303462 -2 - 696 FIG00696574: hypothetical protein - none -
fig|6666666.229931.peg.537 CDS AEJR02000003.1 304870 304154 -1 - 717 Type II secretory pathway, component PulJ - none -
fig|6666666.229931.peg.538 CDS AEJR02000003.1 305501 304884 -2 - 618 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229931.peg.539 CDS AEJR02000003.1 306577 306110 -1 - 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229931.peg.540 CDS AEJR02000003.1 307872 306592 -3 - 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229931.peg.541 CDS AEJR02000003.1 309073 307907 -1 - 1167 TolA protein Ton and Tol transport systems
fig|6666666.229931.peg.542 CDS AEJR02000003.1 309512 309090 -2 - 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229931.peg.543 CDS AEJR02000003.1 310287 309598 -3 - 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229931.peg.544 CDS AEJR02000003.1 310721 310317 -2 - 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229931.peg.545 CDS AEJR02000003.1 310786 310905 1 + 120 hypothetical protein - none -
fig|6666666.229931.peg.546 CDS AEJR02000003.1 312366 311230 -3 - 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229931.peg.547 CDS AEJR02000003.1 313862 312381 -2 - 1482 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229931.peg.548 CDS AEJR02000003.1 314398 314709 1 + 312 Chromosome segregation ATPases - none -
fig|6666666.229931.peg.549 CDS AEJR02000003.1 315776 314763 -2 - 1014 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229931.peg.550 CDS AEJR02000003.1 316405 315791 -1 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229931.peg.551 CDS AEJR02000003.1 317041 316469 -1 - 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229931.peg.552 CDS AEJR02000003.1 317507 317097 -2 - 411 excinuclease ABC subunit A - none -
fig|6666666.229931.peg.553 CDS AEJR02000003.1 318259 317519 -1 - 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229931.peg.554 CDS AEJR02000003.1 318664 318293 -1 - 372 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) Folate Biosynthesis
fig|6666666.229931.peg.555 CDS AEJR02000003.1 320113 318845 -1 - 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229931.peg.556 CDS AEJR02000003.1 320331 320471 3 + 141 hypothetical protein - none -
fig|6666666.229931.peg.557 CDS AEJR02000003.1 322283 320505 -2 - 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229931.peg.558 CDS AEJR02000003.1 323090 323815 2 + 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229931.peg.559 CDS AEJR02000003.1 324242 324102 -2 - 141 transposase - none -
fig|6666666.229931.peg.560 CDS AEJR02000003.1 326988 324511 -3 - 2478 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229931.peg.561 CDS AEJR02000003.1 327506 327174 -2 - 333 hypothetical protein - none -
fig|6666666.229931.peg.562 CDS AEJR02000003.1 327734 328714 2 + 981 Mobile element protein - none -
fig|6666666.229931.peg.563 CDS AEJR02000003.1 328714 328872 1 + 159 ATPase involved in DNA repair - none -
fig|6666666.229931.peg.564 CDS AEJR02000003.1 331862 329295 -2 - 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229931.peg.565 CDS AEJR02000003.1 333336 332005 -3 - 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229931.peg.566 CDS AEJR02000003.1 333737 335689 2 + 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229931.peg.567 CDS AEJR02000003.1 335848 336255 1 + 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229931.peg.568 CDS AEJR02000003.1 336342 336995 3 + 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229931.peg.569 CDS AEJR02000003.1 337347 338699 3 + 1353 Histidine permease YuiF - none -
fig|6666666.229931.peg.570 CDS AEJR02000003.1 338763 339329 3 + 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229931.peg.571 CDS AEJR02000003.1 340810 339386 -1 - 1425 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229931.peg.572 CDS AEJR02000003.1 340918 341046 1 + 129 hypothetical protein - none -
fig|6666666.229931.peg.573 CDS AEJR02000003.1 341154 341297 3 + 144 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) CBSS-87626.3.peg.3639;
Ubiquinone Biosynthesis
fig|6666666.229931.peg.574 CDS AEJR02000003.1 342742 342011 -1 - 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229931.peg.575 CDS AEJR02000003.1 343715 342744 -2 - 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229931.peg.576 CDS AEJR02000003.1 343981 344292 1 + 312 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229931.peg.577 CDS AEJR02000003.1 344313 344570 3 + 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229931.peg.578 CDS AEJR02000003.1 344642 345574 2 + 933 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229931.peg.579 CDS AEJR02000003.1 345652 346569 1 + 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229931.peg.580 CDS AEJR02000003.1 346606 347781 1 + 1176 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229931.peg.581 CDS AEJR02000003.1 347893 347765 -1 - 129 hypothetical protein - none -
fig|6666666.229931.peg.582 CDS AEJR02000003.1 348327 347845 -3 - 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229931.peg.583 CDS AEJR02000003.1 348672 348535 -3 - 138 hypothetical protein - none -
fig|6666666.229931.peg.584 CDS AEJR02000003.1 348695 349543 2 + 849 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229931.peg.585 CDS AEJR02000003.1 349620 350318 3 + 699 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229931.peg.586 CDS AEJR02000003.1 350419 351339 1 + 921 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229931.peg.587 CDS AEJR02000003.1 351593 352288 2 + 696 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229931.peg.588 CDS AEJR02000003.1 352298 353281 2 + 984 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229931.peg.589 CDS AEJR02000003.1 353278 354276 1 + 999 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229931.peg.590 CDS AEJR02000003.1 355090 354383 -1 - 708 Aerobic respiration control protein arcA - none -
fig|6666666.229931.peg.591 CDS AEJR02000003.1 355768 355502 -1 - 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229931.peg.592 CDS AEJR02000003.1 356549 355980 -2 - 570 Lysine decarboxylase family - none -
fig|6666666.229931.peg.593 CDS AEJR02000003.1 356692 358482 1 + 1791 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229931.peg.594 CDS AEJR02000003.1 358584 358471 -3 - 114 hypothetical protein - none -
fig|6666666.229931.peg.595 CDS AEJR02000003.1 358562 358951 2 + 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229931.peg.596 CDS AEJR02000003.1 362231 359349 -2 - 2883 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229931.peg.597 CDS AEJR02000003.1 362474 362596 2 + 123 hypothetical protein - none -
fig|6666666.229931.peg.598 CDS AEJR02000003.1 362706 363665 3 + 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229931.peg.599 CDS AEJR02000003.1 364079 363864 -2 - 216 Thioredoxin - none -
fig|6666666.229931.peg.600 CDS AEJR02000003.1 365282 364287 -2 - 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229931.peg.601 CDS AEJR02000003.1 366415 365306 -1 - 1110 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229931.peg.602 CDS AEJR02000004.1 1035 85 -3 - 951 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229931.peg.603 CDS AEJR02000004.1 1198 2685 1 + 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229931.peg.604 CDS AEJR02000004.1 2701 3729 1 + 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229931.peg.605 CDS AEJR02000004.1 3735 4811 3 + 1077 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229931.peg.606 CDS AEJR02000004.1 4890 5192 3 + 303 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229931.peg.607 CDS AEJR02000004.1 7555 5240 -1 - 2316 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229931.peg.608 CDS AEJR02000004.1 8659 7772 -1 - 888 RuBisCO operon transcriptional regulator CO2 uptake, carboxysome
fig|6666666.229931.peg.609 CDS AEJR02000004.1 8769 10238 3 + 1470 Sodium-dependent transporter - none -
fig|6666666.229931.peg.610 CDS AEJR02000004.1 10250 10849 2 + 600 Phosphoglycerate mutase (EC 5.4.2.1) Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229931.peg.611 CDS AEJR02000004.1 11373 11239 -3 - 135 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229931.peg.612 CDS AEJR02000004.1 11584 12066 1 + 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229931.peg.613 CDS AEJR02000004.1 12942 12355 -3 - 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229931.peg.614 CDS AEJR02000004.1 13409 13128 -2 - 282 hypothetical protein - none -
fig|6666666.229931.peg.615 CDS AEJR02000004.1 13671 14408 3 + 738 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229931.peg.616 CDS AEJR02000004.1 15725 14475 -2 - 1251 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229931.peg.617 CDS AEJR02000004.1 17123 15738 -2 - 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229931.peg.618 CDS AEJR02000004.1 17898 17152 -3 - 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229931.peg.619 CDS AEJR02000004.1 18837 17911 -3 - 927 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229931.peg.620 CDS AEJR02000004.1 18993 21494 3 + 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229931.peg.621 CDS AEJR02000004.1 21504 22133 3 + 630 Nitrate/nitrite response regulator protein - none -
fig|6666666.229931.peg.622 CDS AEJR02000004.1 22200 24059 3 + 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229931.peg.623 CDS AEJR02000004.1 24087 27968 3 + 3882 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229931.peg.624 CDS AEJR02000004.1 27971 29518 2 + 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229931.peg.625 CDS AEJR02000004.1 31199 29583 -2 - 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) CBSS-584.1.peg.3382;
Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.229931.peg.626 CDS AEJR02000004.1 31457 32101 2 + 645 converved hypothetical protein - none -
fig|6666666.229931.peg.627 CDS AEJR02000004.1 32240 33025 2 + 786 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229931.peg.628 CDS AEJR02000004.1 33038 34102 2 + 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229931.peg.629 CDS AEJR02000004.1 34120 34710 1 + 591 FIG01200173: hypothetical protein - none -
fig|6666666.229931.peg.630 CDS AEJR02000004.1 34877 35149 2 + 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229931.peg.631 CDS AEJR02000004.1 35275 36072 1 + 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229931.peg.632 CDS AEJR02000004.1 36127 37959 1 + 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229931.peg.633 CDS AEJR02000004.1 38752 38111 -1 - 642 FIG01220323: hypothetical protein - none -
fig|6666666.229931.peg.634 CDS AEJR02000004.1 39065 38736 -2 - 330 FIG01220323: hypothetical protein - none -
fig|6666666.229931.peg.635 CDS AEJR02000004.1 39197 39078 -2 - 120 hypothetical protein - none -
fig|6666666.229931.peg.636 CDS AEJR02000004.1 39267 40157 3 + 891 Transcriptional regulator, LysR family - none -
fig|6666666.229931.peg.637 CDS AEJR02000004.1 41405 40296 -2 - 1110 Putative exported protein precursor - none -
fig|6666666.229931.peg.638 CDS AEJR02000004.1 41874 41542 -3 - 333 Carboxylesterase type B - none -
fig|6666666.229931.peg.639 CDS AEJR02000004.1 43197 42142 -3 - 1056 Carboxylesterase type B - none -
fig|6666666.229931.peg.640 CDS AEJR02000004.1 44403 43423 -3 - 981 Aldo-keto reductase - none -
fig|6666666.229931.peg.641 CDS AEJR02000004.1 45312 44467 -3 - 846 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229931.peg.642 CDS AEJR02000004.1 45671 46564 2 + 894 Transcriptional regulator, LysR family - none -
fig|6666666.229931.peg.643 CDS AEJR02000004.1 47457 46642 -3 - 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229931.peg.644 CDS AEJR02000004.1 49295 47796 -2 - 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.229931.peg.645 CDS AEJR02000004.1 49421 50089 2 + 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229931.peg.646 CDS AEJR02000004.1 50092 50565 1 + 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229931.peg.647 CDS AEJR02000004.1 50562 51392 3 + 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229931.peg.648 CDS AEJR02000004.1 51389 51823 2 + 435 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229931.peg.649 CDS AEJR02000004.1 51989 53197 2 + 1209 Sodium/glutamate symport protein - none -
fig|6666666.229931.peg.650 CDS AEJR02000004.1 54641 53253 -2 - 1389 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229931.peg.651 CDS AEJR02000004.1 55381 54686 -1 - 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229931.peg.652 CDS AEJR02000004.1 55836 55423 -3 - 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229931.peg.653 CDS AEJR02000004.1 56927 55902 -2 - 1026 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229931.peg.654 CDS AEJR02000004.1 57054 57278 3 + 225 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229931.peg.655 CDS AEJR02000004.1 57283 59022 1 + 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229931.peg.656 CDS AEJR02000004.1 59281 60270 1 + 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229931.peg.657 CDS AEJR02000004.1 61225 60368 -1 - 858 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229931.peg.658 CDS AEJR02000004.1 61344 61769 3 + 426 Universal stress protein A Universal stress protein family
fig|6666666.229931.peg.659 CDS AEJR02000004.1 61969 64593 1 + 2625 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229931.peg.660 CDS AEJR02000004.1 64716 64898 3 + 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229931.peg.661 CDS AEJR02000004.1 64930 66294 1 + 1365 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229931.peg.662 CDS AEJR02000004.1 66370 67257 1 + 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229931.peg.663 CDS AEJR02000004.1 67507 67728 1 + 222 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229931.peg.664 CDS AEJR02000004.1 67816 67685 -1 - 132 hypothetical protein - none -
fig|6666666.229931.peg.665 CDS AEJR02000004.1 67914 68549 3 + 636 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229931.peg.666 CDS AEJR02000004.1 68566 69123 1 + 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229931.peg.667 CDS AEJR02000004.1 69123 69542 3 + 420 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.229931.peg.668 CDS AEJR02000004.1 70948 69638 -1 - 1311 Enolase (EC 4.2.1.11) Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.229931.peg.669 CDS AEJR02000004.1 71133 71017 -3 - 117 hypothetical protein - none -
fig|6666666.229931.peg.670 CDS AEJR02000004.1 72737 71586 -2 - 1152 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229931.peg.671 CDS AEJR02000004.1 73255 72998 -1 - 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.672 CDS AEJR02000004.1 74422 73334 -1 - 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229931.peg.673 CDS AEJR02000004.1 74568 74419 -3 - 150 hypothetical protein - none -
fig|6666666.229931.peg.674 CDS AEJR02000004.1 75808 74573 -1 - 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.675 CDS AEJR02000004.1 76416 75820 -3 - 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.676 CDS AEJR02000004.1 77049 76420 -3 - 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.677 CDS AEJR02000004.1 77834 77049 -2 - 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.678 CDS AEJR02000004.1 79062 77827 -3 - 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.679 CDS AEJR02000004.1 80405 79065 -2 - 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.680 CDS AEJR02000004.1 80487 80624 3 + 138 hypothetical protein - none -
fig|6666666.229931.peg.681 CDS AEJR02000004.1 80751 80635 -3 - 117 hypothetical protein - none -
fig|6666666.229931.peg.682 CDS AEJR02000004.1 81072 80761 -3 - 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229931.peg.683 CDS AEJR02000004.1 81176 81769 2 + 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229931.peg.684 CDS AEJR02000004.1 81875 81750 -2 - 126 hypothetical protein - none -
fig|6666666.229931.peg.685 CDS AEJR02000004.1 83349 82270 -3 - 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229931.peg.686 CDS AEJR02000004.1 83630 83352 -2 - 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229931.peg.687 CDS AEJR02000004.1 84798 83608 -3 - 1191 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229931.peg.688 CDS AEJR02000004.1 84964 85731 1 + 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229931.peg.689 CDS AEJR02000004.1 85762 86103 1 + 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229931.peg.690 CDS AEJR02000004.1 86322 87320 3 + 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229931.peg.691 CDS AEJR02000004.1 87401 88921 2 + 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229931.peg.692 CDS AEJR02000004.1 88937 89995 2 + 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229931.peg.693 CDS AEJR02000004.1 90985 89981 -1 - 1005 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229931.peg.694 CDS AEJR02000004.1 91864 90989 -1 - 876 DnaJ-like protein DjlA - none -
fig|6666666.229931.peg.695 CDS AEJR02000004.1 92590 91946 -1 - 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229931.peg.696 CDS AEJR02000004.1 93316 92600 -1 - 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229931.peg.697 CDS AEJR02000004.1 93434 94297 2 + 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229931.peg.698 CDS AEJR02000004.1 94325 95212 2 + 888 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229931.peg.699 CDS AEJR02000004.1 95289 95720 3 + 432 Patatin-like phospholipase - none -
fig|6666666.229931.peg.700 CDS AEJR02000004.1 95795 96517 2 + 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229931.peg.701 CDS AEJR02000004.1 96672 97520 3 + 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229931.peg.702 CDS AEJR02000004.1 97817 98503 2 + 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229931.peg.703 CDS AEJR02000004.1 98505 99821 3 + 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229931.peg.704 CDS AEJR02000004.1 99831 102062 3 + 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229931.peg.705 CDS AEJR02000004.1 102087 102443 3 + 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229931.peg.706 CDS AEJR02000005.1 295 1248 1 + 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229931.peg.707 CDS AEJR02000005.1 1267 3378 1 + 2112 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229931.peg.708 CDS AEJR02000005.1 3839 3450 -2 - 390 Endoribonuclease L-PSP - none -
fig|6666666.229931.peg.709 CDS AEJR02000005.1 4374 3916 -3 - 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229931.peg.710 CDS AEJR02000005.1 5514 4456 -3 - 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229931.peg.711 CDS AEJR02000005.1 7587 5662 -3 - 1926 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229931.peg.712 CDS AEJR02000005.1 7668 8285 3 + 618 Multiple antibiotic resistance protein marC - none -
fig|6666666.229931.peg.713 CDS AEJR02000005.1 8391 11126 3 + 2736 Putative uncharacterized protein ydbH - none -
fig|6666666.229931.peg.714 CDS AEJR02000005.1 11123 11353 2 + 231 hypothetical protein - none -
fig|6666666.229931.peg.715 CDS AEJR02000005.1 12067 12258 1 + 192 Integrase - none -
fig|6666666.229931.peg.716 CDS AEJR02000005.1 12491 12850 2 + 360 Mobile element protein - none -
fig|6666666.229931.peg.717 CDS AEJR02000005.1 14409 14236 -3 - 174 hypothetical protein - none -
fig|6666666.229931.peg.718 CDS AEJR02000005.1 14799 15470 3 + 672 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229931.peg.719 CDS AEJR02000005.1 15498 16247 3 + 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229931.peg.720 CDS AEJR02000005.1 16385 17476 2 + 1092 Putative exported protein precursor - none -
fig|6666666.229931.peg.721 CDS AEJR02000005.1 18998 17628 -2 - 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229931.peg.722 CDS AEJR02000005.1 19084 20214 1 + 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229931.peg.723 CDS AEJR02000005.1 20211 21125 3 + 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229931.peg.724 CDS AEJR02000005.1 23067 24431 3 + 1365 lipoprotein, putative - none -
fig|6666666.229931.peg.725 CDS AEJR02000005.1 24556 25851 1 + 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229931.peg.726 CDS AEJR02000005.1 25977 26756 3 + 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229931.peg.727 CDS AEJR02000005.1 26779 27462 1 + 684 ABC-type amino acid transport system, permease component - none -
fig|6666666.229931.peg.728 CDS AEJR02000005.1 27472 28239 1 + 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229931.peg.729 CDS AEJR02000005.1 28531 28244 -1 - 288 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229931.peg.730 CDS AEJR02000005.1 28896 28534 -3 - 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229931.peg.731 CDS AEJR02000005.1 29270 28893 -2 - 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229931.peg.732 CDS AEJR02000005.1 29942 29274 -2 - 669 YheO-like PAS domain - none -
fig|6666666.229931.peg.733 CDS AEJR02000005.1 30747 30022 -3 - 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229931.peg.734 CDS AEJR02000005.1 30842 31057 2 + 216 Protein SlyX - none -
fig|6666666.229931.peg.735 CDS AEJR02000005.1 31846 31118 -1 - 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229931.peg.736 CDS AEJR02000005.1 32005 32904 1 + 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229931.peg.737 CDS AEJR02000005.1 32916 33536 3 + 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229931.peg.738 CDS AEJR02000005.1 35282 33648 -2 - 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229931.peg.739 CDS AEJR02000005.1 37047 35299 -3 - 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229931.peg.740 CDS AEJR02000005.1 38538 37216 -3 - 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229931.peg.741 CDS AEJR02000005.1 38883 39305 3 + 423 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229931.peg.742 CDS AEJR02000005.1 39321 39833 3 + 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229931.peg.743 CDS AEJR02000005.1 39912 40925 3 + 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.744 CDS AEJR02000005.1 40928 41725 2 + 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229931.peg.745 CDS AEJR02000005.1 41904 41773 -3 - 132 hypothetical protein - none -
fig|6666666.229931.peg.746 CDS AEJR02000005.1 41925 42182 3 + 258 hypothetical protein - none -
fig|6666666.229931.peg.747 CDS AEJR02000005.1 43380 42367 -3 - 1014 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229931.peg.748 CDS AEJR02000005.1 43576 43794 1 + 219 FIG074102: hypothetical protein - none -
fig|6666666.229931.peg.749 CDS AEJR02000005.1 43851 44294 3 + 444 Flavoprotein MioC Flavodoxin
fig|6666666.229931.peg.750 CDS AEJR02000005.1 44737 46626 1 + 1890 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229931.peg.751 CDS AEJR02000005.1 47656 46898 -1 - 759 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229931.peg.752 CDS AEJR02000005.1 47907 48269 3 + 363 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229931.peg.753 CDS AEJR02000005.1 48262 48945 1 + 684 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229931.peg.754 CDS AEJR02000005.1 49057 49434 1 + 378 FIG048548: ATP synthase protein I2 - none -
fig|6666666.229931.peg.755 CDS AEJR02000005.1 49459 50247 1 + 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229931.peg.756 CDS AEJR02000005.1 50301 50555 3 + 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) - none -
fig|6666666.229931.peg.757 CDS AEJR02000005.1 50605 51075 1 + 471 ATP synthase F0 sector subunit b - none -
fig|6666666.229931.peg.758 CDS AEJR02000005.1 51089 51637 2 + 549 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229931.peg.759 CDS AEJR02000005.1 51650 53191 2 + 1542 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229931.peg.760 CDS AEJR02000005.1 53207 54076 2 + 870 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229931.peg.761 CDS AEJR02000005.1 54093 55466 3 + 1374 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229931.peg.762 CDS AEJR02000005.1 55508 55936 2 + 429 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.229931.peg.763 CDS AEJR02000005.1 57043 55997 -1 - 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229931.peg.764 CDS AEJR02000005.1 57048 57200 3 + 153 hypothetical protein - none -
fig|6666666.229931.peg.765 CDS AEJR02000005.1 57349 59490 1 + 2142 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229931.peg.766 CDS AEJR02000005.1 59555 60337 2 + 783 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229931.peg.767 CDS AEJR02000005.1 60386 61375 2 + 990 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229931.peg.768 CDS AEJR02000005.1 61584 62537 3 + 954 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229931.peg.769 CDS AEJR02000005.1 62518 62712 1 + 195 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229931.peg.770 CDS AEJR02000005.1 62813 64417 2 + 1605 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229931.peg.771 CDS AEJR02000005.1 65434 64598 -1 - 837 PTS system, mannose-specific IID component - none -
fig|6666666.229931.peg.772 CDS AEJR02000005.1 66253 65450 -1 - 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229931.peg.773 CDS AEJR02000005.1 67263 66265 -3 - 999 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229931.peg.774 CDS AEJR02000005.1 67412 67528 2 + 117 hypothetical protein - none -
fig|6666666.229931.peg.775 CDS AEJR02000005.1 67549 68412 1 + 864 Permeases of the major facilitator superfamily - none -
fig|6666666.229931.peg.776 CDS AEJR02000005.1 68373 69011 3 + 639 Permeases of the major facilitator superfamily - none -
fig|6666666.229931.peg.777 CDS AEJR02000005.1 70210 69038 -1 - 1173 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229931.peg.778 CDS AEJR02000005.1 70199 70321 2 + 123 hypothetical protein - none -
fig|6666666.229931.peg.779 CDS AEJR02000005.1 71308 70325 -1 - 984 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229931.peg.780 CDS AEJR02000005.1 71668 71339 -1 - 330 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229931.peg.781 CDS AEJR02000005.1 72917 71721 -2 - 1197 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229931.peg.782 CDS AEJR02000005.1 73994 72927 -2 - 1068 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229931.peg.783 CDS AEJR02000005.1 75509 73998 -2 - 1512 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229931.peg.784 CDS AEJR02000005.1 76567 75569 -1 - 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229931.peg.785 CDS AEJR02000005.1 76825 78144 1 + 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229931.peg.786 CDS AEJR02000005.1 78193 79665 1 + 1473 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229931.peg.787 CDS AEJR02000006.1 67 3000 1 + 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229931.peg.788 CDS AEJR02000006.1 3335 3036 -2 - 300 Putative transcriptional regulator - none -
fig|6666666.229931.peg.789 CDS AEJR02000006.1 3682 3332 -1 - 351 YPPCP.09C homologue - none -
fig|6666666.229931.peg.790 CDS AEJR02000006.1 5452 3869 -1 - 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229931.peg.791 CDS AEJR02000006.1 5522 5638 2 + 117 hypothetical protein - none -
fig|6666666.229931.peg.792 CDS AEJR02000006.1 5809 6636 1 + 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229931.peg.793 CDS AEJR02000006.1 6731 8068 2 + 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229931.peg.794 CDS AEJR02000006.1 8262 8507 3 + 246 FIG00696862: hypothetical protein - none -
fig|6666666.229931.peg.795 CDS AEJR02000006.1 8740 10509 1 + 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229931.peg.796 CDS AEJR02000006.1 12029 10635 -2 - 1395 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229931.peg.797 CDS AEJR02000006.1 12669 11998 -3 - 672 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229931.peg.798 CDS AEJR02000006.1 13223 12807 -2 - 417 Protein ygiW precursor - none -
fig|6666666.229931.peg.799 CDS AEJR02000006.1 13648 14508 1 + 861 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229931.peg.800 CDS AEJR02000006.1 16558 14582 -1 - 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229931.peg.801 CDS AEJR02000006.1 16787 17686 2 + 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229931.peg.802 CDS AEJR02000006.1 17746 18711 1 + 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229931.peg.803 CDS AEJR02000006.1 18719 19642 2 + 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229931.peg.804 CDS AEJR02000006.1 19654 20412 1 + 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229931.peg.805 CDS AEJR02000006.1 22052 20520 -2 - 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229931.peg.806 CDS AEJR02000006.1 22241 23014 2 + 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229931.peg.807 CDS AEJR02000006.1 23026 23811 1 + 786 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229931.peg.808 CDS AEJR02000006.1 25573 24206 -1 - 1368 sodium-dependent transporter - none -
fig|6666666.229931.peg.809 CDS AEJR02000006.1 26233 25598 -1 - 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229931.peg.810 CDS AEJR02000006.1 27165 26380 -3 - 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.811 CDS AEJR02000006.1 27778 27158 -1 - 621 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.812 CDS AEJR02000006.1 28864 27785 -1 - 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.813 CDS AEJR02000006.1 31136 28875 -2 - 2262 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.814 CDS AEJR02000006.1 31727 31137 -2 - 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.815 CDS AEJR02000006.1 32308 31727 -1 - 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229931.peg.816 CDS AEJR02000006.1 33386 32499 -2 - 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229931.peg.817 CDS AEJR02000006.1 33877 33410 -1 - 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229931.peg.818 CDS AEJR02000006.1 34133 35068 2 + 936 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229931.peg.819 CDS AEJR02000006.1 35964 35224 -3 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229931.peg.820 CDS AEJR02000006.1 37351 36332 -1 - 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229931.peg.821 CDS AEJR02000006.1 37813 38718 1 + 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229931.peg.822 CDS AEJR02000006.1 38738 39799 2 + 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229931.peg.823 CDS AEJR02000006.1 39916 40368 1 + 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229931.peg.824 CDS AEJR02000006.1 40368 41492 3 + 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229931.peg.825 CDS AEJR02000006.1 41551 42528 1 + 978 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229931.peg.826 CDS AEJR02000006.1 42537 43133 3 + 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229931.peg.827 CDS AEJR02000006.1 44543 43200 -2 - 1344 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229931.peg.828 CDS AEJR02000006.1 45543 44764 -3 - 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229931.peg.829 CDS AEJR02000006.1 45770 46534 2 + 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229931.peg.830 CDS AEJR02000006.1 46612 47340 1 + 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229931.peg.831 CDS AEJR02000006.1 47327 48388 2 + 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229931.peg.832 CDS AEJR02000006.1 50023 48533 -1 - 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229931.peg.833 CDS AEJR02000006.1 50160 51278 3 + 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229931.peg.834 CDS AEJR02000006.1 51283 52350 1 + 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229931.peg.835 CDS AEJR02000006.1 52525 53409 1 + 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229931.peg.836 CDS AEJR02000006.1 53559 54374 3 + 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229931.peg.837 CDS AEJR02000006.1 56317 56165 -1 - 153 hypothetical protein - none -
fig|6666666.229931.peg.838 CDS AEJR02000006.1 57352 56339 -1 - 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229931.peg.839 CDS AEJR02000006.1 58464 57352 -3 - 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229931.peg.840 CDS AEJR02000006.1 59300 58491 -2 - 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229931.peg.841 CDS AEJR02000006.1 60002 59379 -2 - 624 ATPase component NikO of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229931.peg.842 CDS AEJR02000006.1 60664 59999 -1 - 666 Transmembrane component NikQ of energizing module of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229931.peg.843 CDS AEJR02000006.1 61314 60661 -3 - 654 Substrate-specific component NikM of nickel ECF transporter ECF class transporters;
Transport of Nickel and Cobalt
fig|6666666.229931.peg.844 CDS AEJR02000006.1 61817 61314 -2 - 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229931.peg.845 CDS AEJR02000006.1 62519 61824 -2 - 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229931.peg.846 CDS AEJR02000006.1 63390 62698 -3 - 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229931.peg.847 CDS AEJR02000006.1 64054 63407 -1 - 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229931.peg.848 CDS AEJR02000006.1 65808 64087 -3 - 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229931.peg.849 CDS AEJR02000006.1 66504 65821 -3 - 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229931.peg.850 CDS AEJR02000006.1 66588 66749 3 + 162 hypothetical protein - none -
fig|6666666.229931.peg.851 CDS AEJR02000006.1 66868 67770 1 + 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229931.peg.852 CDS AEJR02000006.1 67827 69335 3 + 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229931.peg.853 CDS AEJR02000006.1 69525 69950 3 + 426 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229931.peg.854 CDS AEJR02000006.1 69911 70585 2 + 675 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229931.peg.855 CDS AEJR02000006.1 70810 71565 1 + 756 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229931.peg.856 CDS AEJR02000006.1 71656 72444 1 + 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229931.peg.857 CDS AEJR02000006.1 72517 72666 1 + 150 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229931.peg.858 CDS AEJR02000006.1 72663 74495 3 + 1833 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229931.peg.859 CDS AEJR02000006.1 75096 74614 -3 - 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229931.peg.860 CDS AEJR02000006.1 75305 76465 2 + 1161 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229931.peg.861 CDS AEJR02000006.1 76475 77992 2 + 1518 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229931.peg.862 CDS AEJR02000006.1 78136 78417 1 + 282 HipB protein Persister Cells
fig|6666666.229931.peg.863 CDS AEJR02000006.1 78467 78805 2 + 339 HipA protein Persister Cells
fig|6666666.229931.peg.864 CDS AEJR02000006.1 78799 78915 1 + 117 HipA protein Persister Cells
fig|6666666.229931.peg.865 CDS AEJR02000006.1 78915 79037 3 + 123 HipA protein Persister Cells
fig|6666666.229931.peg.866 CDS AEJR02000006.1 79927 79034 -1 - 894 hypothetical protein - none -
fig|6666666.229931.peg.867 CDS AEJR02000006.1 82858 79994 -1 - 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229931.peg.868 CDS AEJR02000006.1 83705 83577 -2 - 129 RNA-binding domain protein - none -
fig|6666666.229931.peg.869 CDS AEJR02000006.1 83861 83733 -2 - 129 RNA-binding domain protein - none -
fig|6666666.229931.peg.870 CDS AEJR02000006.1 84349 83900 -1 - 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229931.peg.871 CDS AEJR02000006.1 84559 85953 1 + 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229931.peg.872 CDS AEJR02000006.1 86058 86663 3 + 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229931.peg.873 CDS AEJR02000006.1 86906 86715 -2 - 192 hypothetical protein - none -
fig|6666666.229931.peg.874 CDS AEJR02000006.1 87864 86959 -3 - 906 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229931.peg.875 CDS AEJR02000006.1 88617 87883 -3 - 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229931.peg.876 CDS AEJR02000006.1 88744 89007 1 + 264 Glutaredoxin 1 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229931.peg.877 CDS AEJR02000006.1 89489 89262 -2 - 228 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229931.peg.878 CDS AEJR02000006.1 89751 90965 3 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229931.peg.879 CDS AEJR02000006.1 91743 91048 -3 - 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229931.peg.880 CDS AEJR02000006.1 92597 91737 -2 - 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229931.peg.881 CDS AEJR02000006.1 93387 92638 -3 - 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229931.peg.882 CDS AEJR02000006.1 94570 93479 -1 - 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229931.peg.883 CDS AEJR02000006.1 94918 96690 1 + 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229931.peg.884 CDS AEJR02000006.1 96745 97206 1 + 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229931.peg.885 CDS AEJR02000006.1 97283 97957 2 + 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229931.peg.886 CDS AEJR02000006.1 100424 98067 -2 - 2358 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229931.peg.887 CDS AEJR02000006.1 101593 100544 -1 - 1050 Putative membrane protein YeiH - none -
fig|6666666.229931.peg.888 CDS AEJR02000006.1 107495 101724 -2 - 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229931.peg.889 CDS AEJR02000006.1 108994 107546 -1 - 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229931.peg.890 CDS AEJR02000006.1 109217 109071 -2 - 147 hypothetical protein - none -
fig|6666666.229931.peg.891 CDS AEJR02000006.1 110111 109290 -2 - 822 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229931.peg.892 CDS AEJR02000006.1 110493 110146 -3 - 348 ABC transporter ATP-binding protein - none -
fig|6666666.229931.peg.893 CDS AEJR02000006.1 110756 110496 -2 - 261 ABC transporter ATP-binding protein - none -
fig|6666666.229931.peg.894 CDS AEJR02000006.1 111112 110759 -1 - 354 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229931.peg.895 CDS AEJR02000006.1 112321 111527 -1 - 795 possible DNA-binding protein - none -
fig|6666666.229931.peg.896 CDS AEJR02000006.1 112442 112708 2 + 267 FIG00697940: hypothetical protein - none -
fig|6666666.229931.peg.897 CDS AEJR02000006.1 113879 112731 -2 - 1149 ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) - none -
fig|6666666.229931.peg.898 CDS AEJR02000007.1 1425 58 -3 - 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.899 CDS AEJR02000007.1 1611 2687 3 + 1077 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229931.peg.900 CDS AEJR02000007.1 2974 2753 -1 - 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229931.peg.901 CDS AEJR02000007.1 3081 3776 3 + 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229931.peg.902 CDS AEJR02000007.1 3889 5052 1 + 1164 Phosphoglycerate kinase (EC 2.7.2.3) Glycolysis and Gluconeogenesis
fig|6666666.229931.peg.903 CDS AEJR02000007.1 5117 6196 2 + 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229931.peg.904 CDS AEJR02000007.1 6370 6209 -1 - 162 hypothetical protein - none -
fig|6666666.229931.peg.905 CDS AEJR02000007.1 6335 7546 2 + 1212 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229931.peg.906 CDS AEJR02000007.1 7539 8462 3 + 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229931.peg.907 CDS AEJR02000007.1 9318 8500 -3 - 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229931.peg.908 CDS AEJR02000007.1 9605 10489 2 + 885 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229931.peg.909 CDS AEJR02000007.1 10563 10970 3 + 408 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229931.peg.910 CDS AEJR02000007.1 11021 11437 2 + 417 Threonine dehydratase biosynthetic (EC 4.3.1.19) - none -
fig|6666666.229931.peg.911 CDS AEJR02000007.1 12506 11571 -2 - 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229931.peg.912 CDS AEJR02000007.1 13165 12515 -1 - 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229931.peg.913 CDS AEJR02000007.1 14123 13449 -2 - 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229931.peg.914 CDS AEJR02000007.1 14800 14126 -1 - 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229931.peg.915 CDS AEJR02000007.1 14951 15229 2 + 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229931.peg.916 CDS AEJR02000007.1 15229 15924 1 + 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229931.peg.917 CDS AEJR02000007.1 15921 16400 3 + 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229931.peg.918 CDS AEJR02000007.1 16397 17407 2 + 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229931.peg.919 CDS AEJR02000007.1 17440 18180 1 + 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229931.peg.920 CDS AEJR02000007.1 18208 18783 1 + 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229931.peg.921 CDS AEJR02000007.1 18798 18989 3 + 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229931.peg.922 CDS AEJR02000007.1 19006 20175 1 + 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229931.peg.923 CDS AEJR02000007.1 20587 20420 -1 - 168 hypothetical protein - none -
fig|6666666.229931.peg.924 CDS AEJR02000007.1 21570 20809 -3 - 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229931.peg.925 CDS AEJR02000007.1 21669 22952 3 + 1284 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] - none -
fig|6666666.229931.peg.926 CDS AEJR02000007.1 22953 23447 3 + 495 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229931.peg.927 CDS AEJR02000007.1 24221 23496 -2 - 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229931.peg.928 CDS AEJR02000007.1 24310 25353 1 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229931.peg.929 CDS AEJR02000007.1 25791 25450 -3 - 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229931.peg.930 CDS AEJR02000007.1 25895 26812 2 + 918 transcriptional regulator MtrA - none -
fig|6666666.229931.peg.931 CDS AEJR02000007.1 26900 28744 2 + 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229931.peg.932 CDS AEJR02000007.1 31223 28785 -2 - 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.933 CDS AEJR02000007.1 31431 32054 3 + 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229931.peg.934 CDS AEJR02000007.1 32206 32583 1 + 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229931.peg.935 CDS AEJR02000007.1 32570 32896 2 + 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229931.peg.936 CDS AEJR02000007.1 32909 33139 2 + 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229931.peg.937 CDS AEJR02000007.1 33155 33604 2 + 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome LSU bacterial
fig|6666666.229931.peg.938 CDS AEJR02000007.1 33824 34942 2 + 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229931.peg.939 CDS AEJR02000009.1 476 592 2 + 117 hypothetical protein - none -
fig|6666666.229931.peg.940 CDS AEJR02000009.1 1736 1155 -2 - 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229931.peg.941 CDS AEJR02000009.1 2164 1826 -1 - 339 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.942 CDS AEJR02000009.1 2755 2165 -1 - 591 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.943 CDS AEJR02000009.1 3387 2755 -3 - 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.944 CDS AEJR02000009.1 4006 3398 -1 - 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.945 CDS AEJR02000009.1 5885 4017 -2 - 1869 Putative transport protein - none -
fig|6666666.229931.peg.946 CDS AEJR02000009.1 6524 5925 -2 - 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229931.peg.947 CDS AEJR02000009.1 7701 6517 -3 - 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) Llipid A biosynthesis cluster
fig|6666666.229931.peg.948 CDS AEJR02000009.1 8574 7786 -3 - 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.229931.peg.949 CDS AEJR02000009.1 9005 8595 -2 - 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229931.peg.950 CDS AEJR02000009.1 10164 9142 -3 - 1023 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191) - none -
fig|6666666.229931.peg.951 CDS AEJR02000009.1 10739 10164 -2 - 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229931.peg.952 CDS AEJR02000009.1 13255 10844 -1 - 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229931.peg.953 CDS AEJR02000009.1 14608 13274 -1 - 1335 Membrane-associated zinc metalloprotease - none -
fig|6666666.229931.peg.954 CDS AEJR02000009.1 15486 14617 -3 - 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.955 CDS AEJR02000009.1 16220 15501 -2 - 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229931.peg.956 CDS AEJR02000009.1 17525 16242 -2 - 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229931.peg.957 CDS AEJR02000009.1 18111 17554 -3 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229931.peg.958 CDS AEJR02000009.1 18268 18125 -1 - 144 hypothetical protein - none -
fig|6666666.229931.peg.959 CDS AEJR02000009.1 19049 18336 -2 - 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229931.peg.960 CDS AEJR02000009.1 19107 19238 3 + 132 hypothetical protein - none -
fig|6666666.229931.peg.961 CDS AEJR02000009.1 20864 19206 -2 - 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229931.peg.962 CDS AEJR02000009.1 20988 22805 3 + 1818 ABC transporter ATP-binding protein - none -
fig|6666666.229931.peg.963 CDS AEJR02000009.1 24492 23395 -3 - 1098 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229931.peg.964 CDS AEJR02000009.1 26121 24529 -3 - 1593 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229931.peg.965 CDS AEJR02000009.1 27220 26465 -1 - 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229931.peg.966 CDS AEJR02000009.1 28157 27282 -2 - 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229931.peg.967 CDS AEJR02000009.1 28200 28514 3 + 315 Uncharacterized protein PM1437 - none -
fig|6666666.229931.peg.968 CDS AEJR02000009.1 28852 28526 -1 - 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229931.peg.969 CDS AEJR02000009.1 29412 28864 -3 - 549 FIG00903983: hypothetical protein - none -
fig|6666666.229931.peg.970 CDS AEJR02000009.1 31291 29537 -1 - 1755 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229931.peg.971 CDS AEJR02000009.1 31294 31842 1 + 549 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229931.peg.972 CDS AEJR02000009.1 31847 32398 2 + 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229931.peg.973 CDS AEJR02000009.1 32402 33202 2 + 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229931.peg.974 CDS AEJR02000009.1 34078 33197 -1 - 882 Protein rarD - none -
fig|6666666.229931.peg.975 CDS AEJR02000009.1 34296 34111 -3 - 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229931.peg.976 CDS AEJR02000009.1 34937 35236 2 + 300 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229931.peg.977 CDS AEJR02000009.1 35406 35522 3 + 117 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229931.peg.978 CDS AEJR02000009.1 35701 35838 1 + 138 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229931.peg.979 CDS AEJR02000009.1 35991 36461 3 + 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229931.peg.980 CDS AEJR02000009.1 36576 38678 3 + 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229931.peg.981 CDS AEJR02000010.1 2432 1128 -2 - 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229931.peg.982 CDS AEJR02000010.1 3544 2459 -1 - 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229931.peg.983 CDS AEJR02000010.1 4917 3538 -3 - 1380 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229931.peg.984 CDS AEJR02000010.1 6390 4924 -3 - 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229931.peg.985 CDS AEJR02000010.1 8231 6408 -2 - 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229931.peg.986 CDS AEJR02000010.1 8566 8249 -1 - 318 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229931.peg.987 CDS AEJR02000010.1 9534 8566 -3 - 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229931.peg.988 CDS AEJR02000010.1 10102 9644 -1 - 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229931.peg.989 CDS AEJR02000010.1 11964 10366 -3 - 1599 Carbon starvation protein A Carbon Starvation
fig|6666666.229931.peg.990 CDS AEJR02000010.1 13189 12506 -1 - 684 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229931.peg.991 CDS AEJR02000010.1 13854 13192 -3 - 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229931.peg.992 CDS AEJR02000010.1 14578 13859 -1 - 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229931.peg.993 CDS AEJR02000010.1 15333 14599 -3 - 735 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229931.peg.994 CDS AEJR02000010.1 16058 15474 -2 - 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229931.peg.995 CDS AEJR02000010.1 19618 16160 -1 - 3459 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229931.peg.996 CDS AEJR02000010.1 19919 19746 -2 - 174 hypothetical protein - none -
fig|6666666.229931.peg.997 CDS AEJR02000010.1 21882 19960 -3 - 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229931.peg.998 CDS AEJR02000010.1 22584 21886 -3 - 699 unknown - none -
fig|6666666.229931.peg.999 CDS AEJR02000010.1 23210 22746 -2 - 465 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229931.peg.1000 CDS AEJR02000010.1 23811 23698 -3 - 114 hypothetical protein - none -
fig|6666666.229931.peg.1001 CDS AEJR02000010.1 23777 24007 2 + 231 Flp pilus assembly protein, pilin Flp Widespread colonization island
fig|6666666.229931.peg.1002 CDS AEJR02000010.1 24600 24776 3 + 177 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229931.peg.1003 CDS AEJR02000010.1 24827 25456 2 + 630 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229931.peg.1004 CDS AEJR02000010.1 25774 27036 1 + 1263 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229931.peg.1005 CDS AEJR02000010.1 27552 28676 3 + 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229931.peg.1006 CDS AEJR02000010.1 28690 29970 1 + 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229931.peg.1007 CDS AEJR02000010.1 29970 30857 3 + 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229931.peg.1008 CDS AEJR02000010.1 30854 31720 2 + 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229931.peg.1009 CDS AEJR02000010.1 31710 32471 3 + 762 Flp pilus assembly protein TadD, contains TPR repeat Widespread colonization island
fig|6666666.229931.peg.1010 CDS AEJR02000010.1 33724 35361 1 + 1638 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229931.peg.1011 CDS AEJR02000010.1 36087 35914 -3 - 174 Mobile element protein - none -
fig|6666666.229931.peg.1012 CDS AEJR02000010.1 36575 36339 -2 - 237 Mobile element protein - none -
fig|6666666.229931.peg.1013 CDS AEJR02000010.1 36735 36619 -3 - 117 hypothetical protein - none -
fig|6666666.229931.peg.1014 CDS AEJR02000010.1 39061 37559 -1 - 1503 Sodium-dependent transporter - none -
fig|6666666.229931.peg.1015 CDS AEJR02000010.1 39477 39752 3 + 276 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229931.peg.1016 CDS AEJR02000010.1 39754 39948 1 + 195 hypothetical protein - none -
fig|6666666.229931.peg.1017 CDS AEJR02000010.1 39908 40204 2 + 297 Membrane protein, MgtC/SapB family - none -
fig|6666666.229931.peg.1018 CDS AEJR02000010.1 41145 40243 -3 - 903 hypothetical protein - none -
fig|6666666.229931.peg.1019 CDS AEJR02000010.1 43050 41191 -3 - 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229931.peg.1020 CDS AEJR02000010.1 44441 43047 -2 - 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229931.peg.1021 CDS AEJR02000010.1 44585 46300 2 + 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229931.peg.1022 CDS AEJR02000010.1 46385 46573 2 + 189 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229931.peg.1023 CDS AEJR02000010.1 46613 46867 2 + 255 YgfY COG2938 - none -
fig|6666666.229931.peg.1024 CDS AEJR02000010.1 47000 47575 2 + 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229931.peg.1025 CDS AEJR02000010.1 47614 48198 1 + 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229931.peg.1026 CDS AEJR02000010.1 48281 49237 2 + 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229931.peg.1027 CDS AEJR02000010.1 49247 49684 2 + 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229931.peg.1028 CDS AEJR02000010.1 49765 50277 1 + 513 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229931.peg.1029 CDS AEJR02000010.1 50371 51126 1 + 756 Short chain dehydrogenase - none -
fig|6666666.229931.peg.1030 CDS AEJR02000010.1 52666 51206 -1 - 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229931.peg.1031 CDS AEJR02000010.1 52781 53245 2 + 465 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229931.peg.1032 CDS AEJR02000010.1 55676 53334 -2 - 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229931.peg.1033 CDS AEJR02000010.1 56302 55742 -1 - 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229931.peg.1034 CDS AEJR02000010.1 56501 57106 2 + 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229931.peg.1035 CDS AEJR02000010.1 58409 57159 -2 - 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229931.peg.1036 CDS AEJR02000010.1 58546 58427 -1 - 120 hypothetical protein - none -
fig|6666666.229931.peg.1037 CDS AEJR02000010.1 58669 58983 1 + 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229931.peg.1038 CDS AEJR02000010.1 58980 60869 3 + 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229931.peg.1039 CDS AEJR02000010.1 60966 63386 3 + 2421 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229931.peg.1040 CDS AEJR02000010.1 64355 63441 -2 - 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229931.peg.1041 CDS AEJR02000011.1 921 94 -3 - 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229931.peg.1042 CDS AEJR02000011.1 1449 952 -3 - 498 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229931.peg.1043 CDS AEJR02000011.1 3523 1442 -1 - 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229931.peg.1044 CDS AEJR02000011.1 5647 3524 -1 - 2124 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229931.peg.1045 CDS AEJR02000011.1 5959 5693 -1 - 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229931.peg.1046 CDS AEJR02000011.1 6655 6017 -1 - 639 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229931.peg.1047 CDS AEJR02000011.1 6668 6817 2 + 150 hypothetical protein - none -
fig|6666666.229931.peg.1048 CDS AEJR02000011.1 6897 7901 3 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229931.peg.1049 CDS AEJR02000011.1 8411 7995 -2 - 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229931.peg.1050 CDS AEJR02000011.1 8484 8912 3 + 429 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229931.peg.1051 CDS AEJR02000011.1 8905 9198 1 + 294 UPF0125 protein yfjF - none -
fig|6666666.229931.peg.1052 CDS AEJR02000011.1 9231 10424 3 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229931.peg.1053 CDS AEJR02000011.1 10431 11765 3 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229931.peg.1054 CDS AEJR02000011.1 12625 11771 -1 - 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229931.peg.1055 CDS AEJR02000011.1 13174 12653 -1 - 522 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229931.peg.1056 CDS AEJR02000011.1 13597 13178 -1 - 420 Lipopolysaccharide ABC transporter, ATP-binding protein LptB Lipopolysaccharide assembly
fig|6666666.229931.peg.1057 CDS AEJR02000011.1 14402 13884 -2 - 519 LptA, protein essential for LPS transport across the periplasm Lipopolysaccharide assembly
fig|6666666.229931.peg.1058 CDS AEJR02000011.1 14958 14383 -3 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229931.peg.1059 CDS AEJR02000011.1 15242 16039 2 + 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229931.peg.1060 CDS AEJR02000011.1 16033 16818 1 + 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229931.peg.1061 CDS AEJR02000011.1 16841 17350 2 + 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229931.peg.1062 CDS AEJR02000011.1 17379 18020 3 + 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229931.peg.1063 CDS AEJR02000011.1 18024 18359 3 + 336 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229931.peg.1064 CDS AEJR02000011.1 18359 18616 2 + 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229931.peg.1065 CDS AEJR02000011.1 18633 19910 3 + 1278 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229931.peg.1066 CDS AEJR02000011.1 20262 19972 -3 - 291 FIG00696346: hypothetical protein - none -
fig|6666666.229931.peg.1067 CDS AEJR02000011.1 20465 21895 2 + 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229931.peg.1068 CDS AEJR02000011.1 21972 22511 3 + 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229931.peg.1069 CDS AEJR02000011.1 22508 23176 2 + 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229931.peg.1070 CDS AEJR02000011.1 23241 23966 3 + 726 Integral membrane protein TerC - none -
fig|6666666.229931.peg.1071 CDS AEJR02000011.1 25484 24075 -2 - 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229931.peg.1072 CDS AEJR02000011.1 25871 27724 2 + 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229931.peg.1073 CDS AEJR02000011.1 27834 27721 -3 - 114 hypothetical protein - none -
fig|6666666.229931.peg.1074 CDS AEJR02000011.1 27950 30460 2 + 2511 TolA protein Ton and Tol transport systems
fig|6666666.229931.peg.1075 CDS AEJR02000011.1 30988 30524 -1 - 465 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229931.peg.1076 CDS AEJR02000011.1 31146 32039 3 + 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229931.peg.1077 CDS AEJR02000011.1 32152 33156 1 + 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229931.peg.1078 CDS AEJR02000011.1 33291 34802 3 + 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229931.peg.1079 CDS AEJR02000011.1 35117 35953 2 + 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229931.peg.1080 CDS AEJR02000011.1 36701 36006 -2 - 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229931.peg.1081 CDS AEJR02000011.1 38082 36694 -3 - 1389 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229931.peg.1082 CDS AEJR02000011.1 38221 38352 1 + 132 hypothetical protein - none -
fig|6666666.229931.peg.1083 CDS AEJR02000011.1 38441 40888 2 + 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229931.peg.1084 CDS AEJR02000011.1 40901 41845 2 + 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229931.peg.1085 CDS AEJR02000011.1 41873 42313 2 + 441 hypothetical protein - none -
fig|6666666.229931.peg.1086 CDS AEJR02000011.1 42369 43643 3 + 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229931.peg.1087 CDS AEJR02000011.1 43813 44421 1 + 609 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229931.peg.1088 CDS AEJR02000011.1 44517 45770 3 + 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229931.peg.1089 CDS AEJR02000011.1 45770 46657 2 + 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229931.peg.1090 CDS AEJR02000011.1 46945 46790 -1 - 156 hypothetical protein - none -
fig|6666666.229931.peg.1091 CDS AEJR02000011.1 46947 47276 3 + 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229931.peg.1092 CDS AEJR02000011.1 47302 47982 1 + 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229931.peg.1093 CDS AEJR02000011.1 48021 48344 3 + 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229931.peg.1094 CDS AEJR02000011.1 48344 49513 2 + 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229931.peg.1095 CDS AEJR02000011.1 49612 50268 1 + 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229931.peg.1096 CDS AEJR02000011.1 50288 51520 2 + 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229931.peg.1097 CDS AEJR02000011.1 51529 51648 1 + 120 hypothetical protein - none -
fig|6666666.229931.peg.1098 CDS AEJR02000011.1 51830 52876 2 + 1047 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229931.peg.1099 CDS AEJR02000011.1 53066 54049 2 + 984 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229931.peg.1100 CDS AEJR02000011.1 54073 56448 1 + 2376 Alpha-glucosidase (EC 3.2.1.20) Maltose and Maltodextrin Utilization
fig|6666666.229931.peg.1101 CDS AEJR02000011.1 56463 56978 3 + 516 Hexuronate utilization operon transcriptional repressor ExuR - none -
fig|6666666.229931.peg.1102 CDS AEJR02000011.1 57091 57219 1 + 129 Hexuronate utilization operon transcriptional repressor ExuR - none -
fig|6666666.229931.peg.1103 CDS AEJR02000011.1 57239 58423 2 + 1185 Mannonate dehydratase (EC 4.2.1.8) - none -
fig|6666666.229931.peg.1104 CDS AEJR02000011.1 58461 59018 3 + 558 hypothetical protein - none -
fig|6666666.229931.peg.1105 CDS AEJR02000011.1 59068 59391 1 + 324 hypothetical protein - none -
fig|6666666.229931.peg.1106 CDS AEJR02000011.1 59448 60338 3 + 891 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229931.peg.1107 CDS AEJR02000011.1 62118 60364 -3 - 1755 Putative sulfate permease - none -
fig|6666666.229931.peg.1108 CDS AEJR02000011.1 66877 65027 -1 - 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229931.peg.1109 CDS AEJR02000011.1 68710 66953 -1 - 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229931.peg.1110 CDS AEJR02000011.1 69047 68832 -2 - 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229931.peg.1111 CDS AEJR02000011.1 69082 69249 1 + 168 hypothetical protein - none -
fig|6666666.229931.peg.1112 CDS AEJR02000011.1 69272 70300 2 + 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.229931.peg.1113 CDS AEJR02000011.1 70365 70598 3 + 234 unknown - none -
fig|6666666.229931.peg.1114 CDS AEJR02000011.1 70601 71179 2 + 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229931.peg.1115 CDS AEJR02000011.1 73259 71247 -2 - 2013 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229931.peg.1116 CDS AEJR02000011.1 74398 73361 -1 - 1038 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229931.peg.1117 CDS AEJR02000011.1 74538 75362 3 + 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229931.peg.1118 CDS AEJR02000011.1 75463 76410 1 + 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229931.peg.1119 CDS AEJR02000011.1 76488 76375 -3 - 114 hypothetical protein - none -
fig|6666666.229931.peg.1120 CDS AEJR02000011.1 76776 76630 -3 - 147 hypothetical protein - none -
fig|6666666.229931.peg.1121 CDS AEJR02000011.1 77433 76852 -3 - 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229931.peg.1122 CDS AEJR02000011.1 78833 77742 -2 - 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229931.peg.1123 CDS AEJR02000011.1 79705 79022 -1 - 684 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229931.peg.1124 CDS AEJR02000011.1 80071 80613 1 + 543 Mobile element protein - none -
fig|6666666.229931.peg.1125 CDS AEJR02000012.1 345 716 3 + 372 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.229931.peg.1126 CDS AEJR02000012.1 727 1038 1 + 312 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.229931.peg.1127 CDS AEJR02000012.1 1167 1595 3 + 429 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.229931.peg.1128 CDS AEJR02000012.1 1608 1913 3 + 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229931.peg.1129 CDS AEJR02000012.1 1950 2342 3 + 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229931.peg.1130 CDS AEJR02000012.1 2358 2891 3 + 534 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.229931.peg.1131 CDS AEJR02000012.1 2905 3258 1 + 354 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.229931.peg.1132 CDS AEJR02000012.1 3274 3774 1 + 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229931.peg.1133 CDS AEJR02000012.1 3964 4398 1 + 435 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.229931.peg.1134 CDS AEJR02000012.1 4402 5727 1 + 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229931.peg.1135 CDS AEJR02000012.1 5753 5866 2 + 114 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.229931.peg.1136 CDS AEJR02000012.1 6008 6364 2 + 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229931.peg.1137 CDS AEJR02000012.1 6380 6769 2 + 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229931.peg.1138 CDS AEJR02000012.1 6799 7419 1 + 621 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229931.peg.1139 CDS AEJR02000012.1 7448 8437 2 + 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229931.peg.1140 CDS AEJR02000012.1 8479 8868 1 + 390 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.229931.peg.1141 CDS AEJR02000014.1 335 475 2 + 141 hypothetical protein - none -
fig|6666666.229931.peg.1142 CDS AEJR02000014.1 1364 1119 -2 - 246 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229931.peg.1143 CDS AEJR02000014.1 1669 1442 -1 - 228 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229931.peg.1144 CDS AEJR02000014.1 1706 1885 2 + 180 Mobile element protein - none -
fig|6666666.229931.peg.1145 CDS AEJR02000014.1 2302 3159 1 + 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.229931.peg.1146 CDS AEJR02000014.1 4891 3248 -1 - 1644 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229931.peg.1147 CDS AEJR02000014.1 5302 5012 -1 - 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229931.peg.1148 CDS AEJR02000014.1 5871 5389 -3 - 483 FxsA protein - none -
fig|6666666.229931.peg.1149 CDS AEJR02000014.1 6101 7519 2 + 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229931.peg.1150 CDS AEJR02000014.1 7701 8738 3 + 1038 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229931.peg.1151 CDS AEJR02000014.1 8907 8710 -3 - 198 hypothetical protein - none -
fig|6666666.229931.peg.1152 CDS AEJR02000014.1 9103 8954 -1 - 150 Integral membrane protein - none -
fig|6666666.229931.peg.1153 CDS AEJR02000014.1 10229 9645 -2 - 585 Hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229931.peg.1154 CDS AEJR02000015.1 114 287 3 + 174 hypothetical protein - none -
fig|6666666.229931.peg.1155 CDS AEJR02000015.1 440 1090 2 + 651 Mobile element protein - none -
fig|6666666.229931.peg.1156 CDS AEJR02000016.1 403 146 -1 - 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229931.peg.1157 CDS AEJR02000016.1 594 403 -3 - 192 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.229931.peg.1158 CDS AEJR02000016.1 1004 594 -2 - 411 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.229931.peg.1159 CDS AEJR02000016.1 1725 1018 -3 - 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229931.peg.1160 CDS AEJR02000016.1 2074 1742 -1 - 333 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.229931.peg.1161 CDS AEJR02000016.1 2231 2085 -2 - 147 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229931.peg.1162 CDS AEJR02000016.1 3207 2386 -3 - 822 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.229931.peg.1163 CDS AEJR02000016.1 3530 3228 -2 - 303 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.229931.peg.1164 CDS AEJR02000016.1 4129 3527 -1 - 603 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.229931.peg.1165 CDS AEJR02000016.1 4771 4145 -1 - 627 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.229931.peg.1166 CDS AEJR02000016.1 5099 4788 -2 - 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229931.peg.1167 CDS AEJR02000016.1 6247 5351 -1 - 897 Transcriptional regulators, LysR family - none -
fig|6666666.229931.peg.1168 CDS AEJR02000016.1 6585 7175 3 + 591 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229931.peg.1169 CDS AEJR02000016.1 7187 7852 2 + 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229931.peg.1170 CDS AEJR02000016.1 7855 9198 1 + 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229931.peg.1171 CDS AEJR02000016.1 9216 10397 3 + 1182 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.229931.peg.1172 CDS AEJR02000016.1 10962 10495 -3 - 468 Transcriptional regulator, AsnC family - none -
fig|6666666.229931.peg.1173 CDS AEJR02000016.1 12582 11053 -3 - 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229931.peg.1174 CDS AEJR02000016.1 13631 12699 -2 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229931.peg.1175 CDS AEJR02000016.1 14645 13641 -2 - 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229931.peg.1176 CDS AEJR02000016.1 14888 16279 2 + 1392 Chloride channel protein - none -
fig|6666666.229931.peg.1177 CDS AEJR02000016.1 16282 17265 1 + 984 tRNA dihydrouridine synthase A - none -
fig|6666666.229931.peg.1178 CDS AEJR02000016.1 18313 17321 -1 - 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229931.peg.1179 CDS AEJR02000016.1 18479 18931 2 + 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229931.peg.1180 CDS AEJR02000016.1 18965 19723 2 + 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229931.peg.1181 CDS AEJR02000016.1 20920 19859 -1 - 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229931.peg.1182 CDS AEJR02000016.1 20994 21344 3 + 351 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229931.peg.1183 CDS AEJR02000016.1 21810 21448 -3 - 363 FIG00696564: hypothetical protein - none -
fig|6666666.229931.peg.1184 CDS AEJR02000016.1 22045 21761 -1 - 285 hypothetical protein - none -
fig|6666666.229931.peg.1185 CDS AEJR02000016.1 22254 23585 3 + 1332 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229931.peg.1186 CDS AEJR02000016.1 23710 24114 1 + 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229931.peg.1187 CDS AEJR02000016.1 24241 24459 1 + 219 hypothetical protein - none -
fig|6666666.229931.peg.1188 CDS AEJR02000016.1 25125 24529 -3 - 597 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229931.peg.1189 CDS AEJR02000016.1 25939 25220 -1 - 720 probable periplasmic protein NMA1059 - none -
fig|6666666.229931.peg.1190 CDS AEJR02000016.1 26424 25990 -3 - 435 Ribonuclease E inhibitor RraB RNA processing and degradation, bacterial
fig|6666666.229931.peg.1191 CDS AEJR02000016.1 26914 26519 -1 - 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229931.peg.1192 CDS AEJR02000016.1 28400 27024 -2 - 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229931.peg.1193 CDS AEJR02000016.1 29779 28424 -1 - 1356 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) - none -
fig|6666666.229931.peg.1194 CDS AEJR02000016.1 30735 29779 -3 - 957 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229931.peg.1195 CDS AEJR02000016.1 31313 30801 -2 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229931.peg.1196 CDS AEJR02000017.1 674 99 -2 - 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229931.peg.1197 CDS AEJR02000017.1 862 1617 1 + 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229931.peg.1198 CDS AEJR02000017.1 2740 1664 -1 - 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229931.peg.1199 CDS AEJR02000017.1 3847 2744 -1 - 1104 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229931.peg.1200 CDS AEJR02000017.1 5216 3855 -2 - 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229931.peg.1201 CDS AEJR02000017.1 5634 5768 3 + 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.229931.peg.1202 CDS AEJR02000017.1 5814 6149 3 + 336 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229931.peg.1203 CDS AEJR02000017.1 6104 6367 2 + 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229931.peg.1204 CDS AEJR02000017.1 6409 7998 1 + 1590 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229931.peg.1205 CDS AEJR02000017.1 8126 9481 2 + 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229931.peg.1206 CDS AEJR02000017.1 10493 9585 -2 - 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.229931.peg.1207 CDS AEJR02000017.1 11170 10490 -1 - 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229931.peg.1208 CDS AEJR02000017.1 12199 11177 -1 - 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229931.peg.1209 CDS AEJR02000017.1 14006 12210 -2 - 1797 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229931.peg.1210 CDS AEJR02000017.1 14553 14170 -3 - 384 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229931.peg.1211 CDS AEJR02000017.1 14839 15507 1 + 669 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229931.peg.1212 CDS AEJR02000017.1 15529 16308 1 + 780 UPF0246 protein YaaA - none -
fig|6666666.229931.peg.1213 CDS AEJR02000017.1 16310 16876 2 + 567 FIG00696199: hypothetical protein - none -
fig|6666666.229931.peg.1214 CDS AEJR02000017.1 16876 17796 1 + 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229931.peg.1215 CDS AEJR02000017.1 17858 18823 2 + 966 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229931.peg.1216 CDS AEJR02000017.1 19420 18923 -1 - 498 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229931.peg.1217 CDS AEJR02000017.1 20100 19540 -3 - 561 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229931.peg.1218 CDS AEJR02000017.1 21148 20102 -1 - 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229931.peg.1219 CDS AEJR02000017.1 21476 21150 -2 - 327 Predicted periplasmic lipoprotein - none -
fig|6666666.229931.peg.1220 CDS AEJR02000017.1 21853 21503 -1 - 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229931.peg.1221 CDS AEJR02000017.1 22194 23015 3 + 822 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229931.peg.1222 CDS AEJR02000017.1 23114 25426 2 + 2313 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229931.peg.1223 CDS AEJR02000017.1 25571 26311 2 + 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229931.peg.1224 CDS AEJR02000017.1 26453 27316 2 + 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229931.peg.1225 CDS AEJR02000017.1 28799 27387 -2 - 1413 Putative cell division protein precursor - none -
fig|6666666.229931.peg.1226 CDS AEJR02000017.1 29550 28807 -3 - 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.1227 CDS AEJR02000017.1 29661 30392 3 + 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) Llipid A biosynthesis cluster
fig|6666666.229931.peg.1228 CDS AEJR02000017.1 30385 30891 1 + 507 Arabinose efflux permease - none -
fig|6666666.229931.peg.1229 CDS AEJR02000017.1 30954 31631 3 + 678 YheO-like PAS domain - none -
fig|6666666.229931.peg.1230 CDS AEJR02000017.1 32911 31697 -1 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229931.peg.1231 CDS AEJR02000017.1 34449 33073 -3 - 1377 Tyrosine phenol-lyase (EC 4.1.99.2) - none -
fig|6666666.229931.peg.1232 CDS AEJR02000017.1 35300 34779 -2 - 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229931.peg.1233 CDS AEJR02000017.1 35365 36396 1 + 1032 Lysyl-lysine 2,3-aminomutase Translation elongation factor P lysylation
fig|6666666.229931.peg.1234 CDS AEJR02000017.1 36567 37880 3 + 1314 Cell envelope opacity-associated protein A - none -
fig|6666666.229931.peg.1235 CDS AEJR02000017.1 37942 38316 1 + 375 opacity associated protein - none -
fig|6666666.229931.peg.1236 CDS AEJR02000017.1 39312 38407 -3 - 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229931.peg.1237 CDS AEJR02000017.1 39375 39833 3 + 459 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229931.peg.1238 CDS AEJR02000017.1 39839 40078 2 + 240 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229931.peg.1239 CDS AEJR02000017.1 40078 41238 1 + 1161 Probable 3-phenylpropionic acid transporter - none -
fig|6666666.229931.peg.1240 CDS AEJR02000017.1 41241 42134 3 + 894 Tyrosine recombinase XerD - none -
fig|6666666.229931.peg.1241 CDS AEJR02000017.1 42298 43596 1 + 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229931.peg.1242 CDS AEJR02000017.1 45005 44061 -2 - 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229931.peg.1243 CDS AEJR02000017.1 45499 45005 -1 - 495 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229931.peg.1244 CDS AEJR02000017.1 48401 45579 -2 - 2823 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229931.peg.1245 CDS AEJR02000017.1 48603 48439 -3 - 165 FIG01055344: hypothetical protein - none -
fig|6666666.229931.peg.1246 CDS AEJR02000017.1 49743 48817 -3 - 927 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229931.peg.1247 CDS AEJR02000017.1 51398 49821 -2 - 1578 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229931.peg.1248 CDS AEJR02000017.1 51666 51929 3 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229931.peg.1249 CDS AEJR02000017.1 51963 52082 3 + 120 hypothetical protein - none -
fig|6666666.229931.peg.1250 CDS AEJR02000017.1 52680 52039 -3 - 642 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229931.peg.1251 CDS AEJR02000017.1 52789 53733 1 + 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229931.peg.1252 CDS AEJR02000017.1 53744 54235 2 + 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229931.peg.1253 CDS AEJR02000017.1 55127 54315 -2 - 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229931.peg.1254 CDS AEJR02000017.1 56274 55255 -3 - 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229931.peg.1255 CDS AEJR02000017.1 57144 56374 -3 - 771 HesA/MoeB/ThiF family protein related to EC-YgdL - none -
fig|6666666.229931.peg.1256 CDS AEJR02000017.1 58262 57144 -2 - 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229931.peg.1257 CDS AEJR02000017.1 60015 58642 -3 - 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229931.peg.1258 CDS AEJR02000017.1 60173 61180 2 + 1008 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229931.peg.1259 CDS AEJR02000017.1 62208 61444 -3 - 765 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229931.peg.1260 CDS AEJR02000017.1 62357 62223 -2 - 135 hypothetical protein - none -
fig|6666666.229931.peg.1261 CDS AEJR02000017.1 62344 62892 1 + 549 putative membrane protein - none -
fig|6666666.229931.peg.1262 CDS AEJR02000017.1 63522 63325 -3 - 198 hypothetical protein - none -
fig|6666666.229931.peg.1263 CDS AEJR02000018.1 936 118 -3 - 819 Peptide transport system ATP-binding protein SapF - none -
fig|6666666.229931.peg.1264 CDS AEJR02000018.1 1992 940 -3 - 1053 Peptide transport system ATP-binding protein SapD - none -
fig|6666666.229931.peg.1265 CDS AEJR02000018.1 2887 2000 -1 - 888 Peptide transport system permease protein SapC - none -
fig|6666666.229931.peg.1266 CDS AEJR02000018.1 3842 2877 -2 - 966 Peptide transport system permease protein SapB - none -
fig|6666666.229931.peg.1267 CDS AEJR02000018.1 5473 3842 -1 - 1632 Peptide transport periplasmic protein sapA (TC 3.A.1.5.5) - none -
fig|6666666.229931.peg.1268 CDS AEJR02000018.1 5738 7153 2 + 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229931.peg.1269 CDS AEJR02000018.1 7166 8245 2 + 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229931.peg.1270 CDS AEJR02000018.1 8329 9288 1 + 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229931.peg.1271 CDS AEJR02000018.1 9419 9285 -2 - 135 hypothetical protein - none -
fig|6666666.229931.peg.1272 CDS AEJR02000018.1 9653 9504 -2 - 150 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229931.peg.1273 CDS AEJR02000018.1 9964 9668 -1 - 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229931.peg.1274 CDS AEJR02000018.1 11027 10083 -2 - 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229931.peg.1275 CDS AEJR02000018.1 12892 11042 -1 - 1851 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229931.peg.1276 CDS AEJR02000018.1 14379 12892 -3 - 1488 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229931.peg.1277 CDS AEJR02000018.1 14828 14376 -2 - 453 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE
fig|6666666.229931.peg.1278 CDS AEJR02000018.1 14845 14973 1 + 129 hypothetical protein - none -
fig|6666666.229931.peg.1279 CDS AEJR02000018.1 16819 15026 -1 - 1794 Mlr4739 protein - none -
fig|6666666.229931.peg.1280 CDS AEJR02000018.1 18115 17207 -1 - 909 RfbJ protein - none -
fig|6666666.229931.peg.1281 CDS AEJR02000018.1 19635 18127 -3 - 1509 conserved domain protein - none -
fig|6666666.229931.peg.1282 CDS AEJR02000018.1 20239 19622 -1 - 618 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229931.peg.1283 CDS AEJR02000018.1 21782 20268 -2 - 1515 Dca - none -
fig|6666666.229931.peg.1284 CDS AEJR02000018.1 22849 22301 -1 - 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229931.peg.1285 CDS AEJR02000018.1 22920 23960 3 + 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229931.peg.1286 CDS AEJR02000018.1 24181 24438 1 + 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229931.peg.1287 CDS AEJR02000018.1 24552 26279 3 + 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229931.peg.1288 CDS AEJR02000018.1 26340 26840 3 + 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229931.peg.1289 CDS AEJR02000018.1 29005 26966 -1 - 2040 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229931.peg.1290 CDS AEJR02000018.1 29147 29512 2 + 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229931.peg.1291 CDS AEJR02000018.1 29568 31106 3 + 1539 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229931.peg.1292 CDS AEJR02000018.1 31968 31381 -3 - 588 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229931.peg.1293 CDS AEJR02000018.1 32945 31971 -2 - 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229931.peg.1294 CDS AEJR02000018.1 33047 33613 2 + 567 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229931.peg.1295 CDS AEJR02000018.1 33769 34713 1 + 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229931.peg.1296 CDS AEJR02000018.1 35256 36440 3 + 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229931.peg.1297 CDS AEJR02000018.1 36455 37141 2 + 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229931.peg.1298 CDS AEJR02000018.1 37141 38391 1 + 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229931.peg.1299 CDS AEJR02000018.1 38492 39571 2 + 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229931.peg.1300 CDS AEJR02000018.1 39702 39580 -3 - 123 hypothetical protein - none -
fig|6666666.229931.peg.1301 CDS AEJR02000018.1 39717 41123 3 + 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229931.peg.1302 CDS AEJR02000018.1 41147 42229 2 + 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229931.peg.1303 CDS AEJR02000018.1 42245 43894 2 + 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229931.peg.1304 CDS AEJR02000018.1 44034 44507 3 + 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229931.peg.1305 CDS AEJR02000018.1 44514 44939 3 + 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229931.peg.1306 CDS AEJR02000018.1 44958 45941 3 + 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229931.peg.1307 CDS AEJR02000018.1 45951 46442 3 + 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229931.peg.1308 CDS AEJR02000018.1 46451 47071 2 + 621 L-lysine permease - none -
fig|6666666.229931.peg.1309 CDS AEJR02000018.1 47093 47905 2 + 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229931.peg.1310 CDS AEJR02000018.1 47933 48064 2 + 132 hypothetical protein - none -
fig|6666666.229931.peg.1311 CDS AEJR02000018.1 48265 48017 -1 - 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229931.peg.1312 CDS AEJR02000018.1 48602 48333 -2 - 270 hypothetical protein - none -
fig|6666666.229931.peg.1313 CDS AEJR02000018.1 49754 48624 -2 - 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229931.peg.1314 CDS AEJR02000018.1 50612 49956 -2 - 657 hypothetical protein - none -
fig|6666666.229931.peg.1315 CDS AEJR02000018.1 52936 50666 -1 - 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229931.peg.1316 CDS AEJR02000018.1 53273 53145 -2 - 129 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229931.peg.1317 CDS AEJR02000018.1 54711 53239 -3 - 1473 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229931.peg.1318 CDS AEJR02000018.1 54849 54971 3 + 123 hypothetical protein - none -
fig|6666666.229931.peg.1319 CDS AEJR02000018.1 55763 55978 2 + 216 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229931.peg.1320 CDS AEJR02000018.1 56030 58060 2 + 2031 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229931.peg.1321 CDS AEJR02000018.1 58044 59084 3 + 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229931.peg.1322 CDS AEJR02000018.1 61192 59141 -1 - 2052 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229931.peg.1323 CDS AEJR02000018.1 62177 61287 -2 - 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229931.peg.1324 CDS AEJR02000018.1 63743 62199 -2 - 1545 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229931.peg.1325 CDS AEJR02000018.1 63898 63767 -1 - 132 hypothetical protein - none -
fig|6666666.229931.peg.1326 CDS AEJR02000018.1 65057 63867 -2 - 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229931.peg.1327 CDS AEJR02000018.1 65514 66632 3 + 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229931.peg.1328 CDS AEJR02000018.1 66709 67992 1 + 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229931.peg.1329 CDS AEJR02000018.1 68078 68977 2 + 900 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229931.peg.1330 CDS AEJR02000018.1 69048 69179 3 + 132 hypothetical protein - none -
fig|6666666.229931.peg.1331 CDS AEJR02000018.1 70085 69354 -2 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229931.peg.1332 CDS AEJR02000018.1 71315 70101 -2 - 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229931.peg.1333 CDS AEJR02000018.1 71444 72100 2 + 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229931.peg.1334 CDS AEJR02000018.1 73641 72199 -3 - 1443 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229931.peg.1335 CDS AEJR02000018.1 73802 74278 2 + 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229931.peg.1336 CDS AEJR02000018.1 74655 74353 -3 - 303 FIG004454: RNA binding protein - none -
fig|6666666.229931.peg.1337 CDS AEJR02000018.1 74823 75134 3 + 312 Phage-related protein - none -
fig|6666666.229931.peg.1338 CDS AEJR02000018.1 75119 75415 2 + 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229931.peg.1339 CDS AEJR02000018.1 76062 75448 -3 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229931.peg.1340 CDS AEJR02000018.1 76089 77486 3 + 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229931.peg.1341 CDS AEJR02000018.1 78270 77791 -3 - 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229931.peg.1342 CDS AEJR02000018.1 78331 79302 1 + 972 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229931.peg.1343 CDS AEJR02000018.1 79358 79681 2 + 324 capsular polysaccharide biosynthesis protein, putative - none -
fig|6666666.229931.peg.1344 CDS AEJR02000018.1 80900 81202 2 + 303 Major pilus subunit of type IV secretion complex, VirB2 - none -
fig|6666666.229931.peg.1345 CDS AEJR02000019.1 1496 69 -2 - 1428 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229931.peg.1346 CDS AEJR02000019.1 2380 1508 -1 - 873 Integral membrane protein - none -
fig|6666666.229931.peg.1347 CDS AEJR02000019.1 6946 2456 -1 - 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229931.peg.1348 CDS AEJR02000019.1 7686 6946 -3 - 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229931.peg.1349 CDS AEJR02000019.1 7895 7707 -2 - 189 hypothetical protein - none -
fig|6666666.229931.peg.1350 CDS AEJR02000019.1 11164 7886 -1 - 3279 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229931.peg.1351 CDS AEJR02000019.1 12663 11335 -3 - 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229931.peg.1352 CDS AEJR02000019.1 13721 12843 -2 - 879 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229931.peg.1353 CDS AEJR02000019.1 14498 13896 -2 - 603 lipoprotein HlpB - none -
fig|6666666.229931.peg.1354 CDS AEJR02000019.1 14934 14647 -3 - 288 LSU ribosomal protein L25p Ribosome LSU bacterial;
Transcription repair cluster
fig|6666666.229931.peg.1355 CDS AEJR02000019.1 15148 15753 1 + 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229931.peg.1356 CDS AEJR02000019.1 15707 15847 2 + 141 hypothetical protein - none -
fig|6666666.229931.peg.1357 CDS AEJR02000019.1 18337 15872 -1 - 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229931.peg.1358 CDS AEJR02000019.1 19900 18461 -1 - 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229931.peg.1359 CDS AEJR02000019.1 21412 20102 -1 - 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229931.peg.1360 CDS AEJR02000019.1 23448 21439 -3 - 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229931.peg.1361 CDS AEJR02000019.1 25640 23445 -2 - 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229931.peg.1362 CDS AEJR02000019.1 26197 25637 -1 - 561 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229931.peg.1363 CDS AEJR02000019.1 26731 26297 -1 - 435 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229931.peg.1364 CDS AEJR02000019.1 28494 26803 -3 - 1692 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229931.peg.1365 CDS AEJR02000019.1 28695 29879 3 + 1185 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229931.peg.1366 CDS AEJR02000019.1 29899 31833 1 + 1935 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) Multidrug Resistance Efflux Pumps
fig|6666666.229931.peg.1367 CDS AEJR02000019.1 31910 33283 2 + 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229931.peg.1368 CDS AEJR02000019.1 35097 33556 -3 - 1542 Esterase/lipase - none -
fig|6666666.229931.peg.1369 CDS AEJR02000019.1 35994 35725 -3 - 270 hypothetical protein - none -
fig|6666666.229931.peg.1370 CDS AEJR02000019.1 36561 37499 3 + 939 hypothetical protein - none -
fig|6666666.229931.peg.1371 CDS AEJR02000019.1 38630 38307 -2 - 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229931.peg.1372 CDS AEJR02000019.1 39576 38713 -3 - 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229931.peg.1373 CDS AEJR02000019.1 40088 39621 -2 - 468 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229931.peg.1374 CDS AEJR02000019.1 40299 40096 -3 - 204 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229931.peg.1375 CDS AEJR02000019.1 40430 41326 2 + 897 Putative surface protein - none -
fig|6666666.229931.peg.1376 CDS AEJR02000019.1 41352 42809 3 + 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.1377 CDS AEJR02000019.1 42871 43512 1 + 642 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229931.peg.1378 CDS AEJR02000019.1 44915 43569 -2 - 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229931.peg.1379 CDS AEJR02000019.1 45834 44938 -3 - 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229931.peg.1380 CDS AEJR02000019.1 46059 46304 3 + 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229931.peg.1381 CDS AEJR02000019.1 46315 47205 1 + 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229931.peg.1382 CDS AEJR02000019.1 47290 49140 1 + 1851 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229931.peg.1383 CDS AEJR02000019.1 50018 49260 -2 - 759 Galactitol utilization operon repressor - none -
fig|6666666.229931.peg.1384 CDS AEJR02000019.1 50481 50179 -3 - 303 Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144) - none -
fig|6666666.229931.peg.1385 CDS AEJR02000019.1 50801 50478 -2 - 324 Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40) Lactose and Galactose Uptake and Utilization
fig|6666666.229931.peg.1386 CDS AEJR02000019.1 50892 51011 3 + 120 hypothetical protein - none -
fig|6666666.229931.peg.1387 CDS AEJR02000019.1 52180 52293 1 + 114 hypothetical protein - none -
fig|6666666.229931.peg.1388 CDS AEJR02000019.1 52695 52342 -3 - 354 LSU ribosomal protein L20p Ribosome LSU bacterial
fig|6666666.229931.peg.1389 CDS AEJR02000019.1 53026 53169 1 + 144 hypothetical protein - none -
fig|6666666.229931.peg.1390 CDS AEJR02000019.1 53649 53170 -3 - 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229931.peg.1391 CDS AEJR02000019.1 54024 54803 3 + 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229931.peg.1392 CDS AEJR02000019.1 54918 54781 -3 - 138 hypothetical protein - none -
fig|6666666.229931.peg.1393 CDS AEJR02000019.1 55219 54920 -1 - 300 Type III restriction-modification system restriction subunit (EC 3.1.21.5) - none -
fig|6666666.229931.peg.1394 CDS AEJR02000019.1 55950 55222 -3 - 729 Type III restriction-modification system restriction subunit (EC 3.1.21.5) - none -
fig|6666666.229931.peg.1395 CDS AEJR02000019.1 56441 55995 -2 - 447 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229931.peg.1396 CDS AEJR02000019.1 58618 56687 -1 - 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229931.peg.1397 CDS AEJR02000019.1 58859 59734 2 + 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229931.peg.1398 CDS AEJR02000019.1 60614 59793 -2 - 822 Outer membrane protein A precursor Osmoregulation
fig|6666666.229931.peg.1399 CDS AEJR02000019.1 61862 60804 -2 - 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229931.peg.1400 CDS AEJR02000019.1 62055 62645 3 + 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229931.peg.1401 CDS AEJR02000019.1 64085 62748 -2 - 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229931.peg.1402 CDS AEJR02000019.1 65851 64262 -1 - 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229931.peg.1403 CDS AEJR02000019.1 66969 66121 -3 - 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229931.peg.1404 CDS AEJR02000019.1 67046 68770 2 + 1725 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229931.peg.1405 CDS AEJR02000019.1 68771 69139 2 + 369 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229931.peg.1406 CDS AEJR02000019.1 69152 69736 2 + 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229931.peg.1407 CDS AEJR02000019.1 69801 70388 3 + 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229931.peg.1408 CDS AEJR02000019.1 71186 70494 -2 - 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229931.peg.1409 CDS AEJR02000019.1 71402 72472 2 + 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229931.peg.1410 CDS AEJR02000019.1 72476 73117 2 + 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229931.peg.1411 CDS AEJR02000019.1 73132 73614 1 + 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229931.peg.1412 CDS AEJR02000019.1 74631 74750 3 + 120 FIG00697497: hypothetical protein - none -
fig|6666666.229931.peg.1413 CDS AEJR02000019.1 75043 74786 -1 - 258 FIG00699498: hypothetical protein - none -
fig|6666666.229931.peg.1414 CDS AEJR02000019.1 75878 76864 2 + 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229931.peg.1415 CDS AEJR02000019.1 77561 76848 -2 - 714 SanA protein - none -
fig|6666666.229931.peg.1416 CDS AEJR02000019.1 77754 78857 3 + 1104 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229931.peg.1417 CDS AEJR02000019.1 79163 80161 2 + 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229931.peg.1418 CDS AEJR02000019.1 80464 80598 1 + 135 hypothetical protein - none -
fig|6666666.229931.peg.1419 CDS AEJR02000019.1 80632 80952 1 + 321 putative cytoplasmic protein - none -
fig|6666666.229931.peg.1420 CDS AEJR02000019.1 81894 81067 -3 - 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229931.peg.1421 CDS AEJR02000019.1 82950 81979 -3 - 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229931.peg.1422 CDS AEJR02000019.1 83948 82962 -2 - 987 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229931.peg.1423 CDS AEJR02000019.1 85752 84628 -3 - 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229931.peg.1424 CDS AEJR02000019.1 87673 85793 -1 - 1881 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229931.peg.1425 CDS AEJR02000019.1 87797 88351 2 + 555 FIG002003: Protein YdjA - none -
fig|6666666.229931.peg.1426 CDS AEJR02000019.1 88576 88695 1 + 120 hypothetical protein - none -
fig|6666666.229931.peg.1427 CDS AEJR02000019.1 90262 88781 -1 - 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229931.peg.1428 CDS AEJR02000019.1 91969 90299 -1 - 1671 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229931.peg.1429 CDS AEJR02000019.1 94655 91998 -2 - 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229931.peg.1430 CDS AEJR02000019.1 95034 95909 3 + 876 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229931.peg.1431 CDS AEJR02000019.1 98776 96062 -1 - 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229931.peg.1432 CDS AEJR02000019.1 98945 101335 2 + 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229931.peg.1433 CDS AEJR02000019.1 101438 103513 2 + 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229931.peg.1434 CDS AEJR02000019.1 103535 103660 2 + 126 hypothetical protein - none -
fig|6666666.229931.peg.1435 CDS AEJR02000019.1 104199 103657 -3 - 543 Colicin V production protein - none -
fig|6666666.229931.peg.1436 CDS AEJR02000019.1 104821 104378 -1 - 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229931.peg.1437 CDS AEJR02000019.1 105089 106291 2 + 1203 Acetate kinase (EC 2.7.2.1) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229931.peg.1438 CDS AEJR02000019.1 106361 108496 2 + 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229931.peg.1439 CDS AEJR02000019.1 108843 109205 3 + 363 hypothetical protein - none -
fig|6666666.229931.peg.1440 CDS AEJR02000019.1 109776 109276 -3 - 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229931.peg.1441 CDS AEJR02000019.1 111235 109769 -1 - 1467 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229931.peg.1442 CDS AEJR02000019.1 111789 111352 -3 - 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229931.peg.1443 CDS AEJR02000019.1 112282 114516 1 + 2235 DNA internalization-related competence protein ComEC/Rec2 - none -
fig|6666666.229931.peg.1444 CDS AEJR02000019.1 114563 116311 2 + 1749 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229931.peg.1445 CDS AEJR02000019.1 117054 117299 3 + 246 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) - none -
fig|6666666.229931.peg.1446 CDS AEJR02000019.1 117321 117500 3 + 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems
fig|6666666.229931.peg.1447 CDS AEJR02000019.1 117502 118275 1 + 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) - none -
fig|6666666.229931.peg.1448 CDS AEJR02000019.1 118414 120243 1 + 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229931.peg.1449 CDS AEJR02000019.1 121719 120628 -3 - 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229931.peg.1450 CDS AEJR02000019.1 122590 121739 -1 - 852 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229931.peg.1451 CDS AEJR02000019.1 123456 122587 -3 - 870 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229931.peg.1452 CDS AEJR02000019.1 124523 123453 -2 - 1071 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229931.peg.1453 CDS AEJR02000019.1 125705 124761 -2 - 945 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229931.peg.1454 CDS AEJR02000019.1 127230 126382 -3 - 849 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229931.peg.1455 CDS AEJR02000019.1 127699 127860 1 + 162 hypothetical protein - none -
fig|6666666.229931.peg.1456 CDS AEJR02000019.1 128073 127831 -3 - 243 DNA-damage-inducible protein d - none -
fig|6666666.229931.peg.1457 CDS AEJR02000019.1 129678 128254 -3 - 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229931.peg.1458 CDS AEJR02000019.1 131224 129689 -1 - 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229931.peg.1459 CDS AEJR02000019.1 131519 132244 2 + 726 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229931.peg.1460 CDS AEJR02000019.1 132492 133679 3 + 1188 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229931.peg.1461 CDS AEJR02000019.1 134212 134415 1 + 204 hypothetical protein - none -
fig|6666666.229931.peg.1462 CDS AEJR02000019.1 134508 134660 3 + 153 hypothetical protein - none -
fig|6666666.229931.peg.1463 CDS AEJR02000019.1 135619 134702 -1 - 918 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229931.peg.1464 CDS AEJR02000019.1 136005 135619 -3 - 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229931.peg.1465 CDS AEJR02000019.1 139026 136537 -3 - 2490 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229931.peg.1466 CDS AEJR02000019.1 140538 139042 -3 - 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229931.peg.1467 CDS AEJR02000019.1 141017 140562 -2 - 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229931.peg.1468 CDS AEJR02000019.1 141283 142806 1 + 1524 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229931.peg.1469 CDS AEJR02000019.1 142836 143021 3 + 186 hypothetical protein - none -
fig|6666666.229931.peg.1470 CDS AEJR02000019.1 143061 143333 3 + 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229931.peg.1471 CDS AEJR02000019.1 143345 143611 2 + 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229931.peg.1472 CDS AEJR02000019.1 143643 145202 3 + 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229931.peg.1473 CDS AEJR02000019.1 145383 146141 3 + 759 Integrase - none -
fig|6666666.229931.peg.1474 CDS AEJR02000019.1 146749 146138 -1 - 612 Phage tail fibers Phage tail fiber proteins
fig|6666666.229931.peg.1475 CDS AEJR02000019.1 147987 146749 -3 - 1239 Phage tail fibers Phage tail fiber proteins
fig|6666666.229931.peg.1476 CDS AEJR02000019.1 148326 148198 -3 - 129 hypothetical protein - none -
fig|6666666.229931.peg.1477 CDS AEJR02000019.1 149449 148298 -1 - 1152 Family of unknown function (DUF450) family - none -
fig|6666666.229931.peg.1478 CDS AEJR02000019.1 149702 149884 2 + 183 hypothetical protein - none -
fig|6666666.229931.peg.1479 CDS AEJR02000019.1 149936 150355 2 + 420 hypothetical protein - none -
fig|6666666.229931.peg.1480 CDS AEJR02000019.1 150740 150381 -2 - 360 phage-related protein - none -
fig|6666666.229931.peg.1481 CDS AEJR02000019.1 151011 151187 3 + 177 hypothetical protein - none -
fig|6666666.229931.peg.1482 CDS AEJR02000019.1 152638 151688 -1 - 951 hypothetical protein - none -
fig|6666666.229931.peg.1483 CDS AEJR02000019.1 154420 155373 1 + 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229931.peg.1484 CDS AEJR02000019.1 155436 156293 3 + 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229931.peg.1485 CDS AEJR02000019.1 156325 157551 1 + 1227 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229931.peg.1486 CDS AEJR02000019.1 157554 157670 3 + 117 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229931.peg.1487 CDS AEJR02000019.1 157823 157698 -2 - 126 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229931.peg.1488 CDS AEJR02000019.1 158718 157777 -3 - 942 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229931.peg.1489 CDS AEJR02000019.1 159229 158843 -1 - 387 Integral membrane protein - none -
fig|6666666.229931.peg.1490 CDS AEJR02000019.1 159423 160439 3 + 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229931.peg.1491 CDS AEJR02000019.1 160445 160786 2 + 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229931.peg.1492 CDS AEJR02000019.1 160793 162082 2 + 1290 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229931.peg.1493 CDS AEJR02000019.1 162215 162859 2 + 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229931.peg.1494 CDS AEJR02000019.1 164819 163596 -2 - 1224 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229931.peg.1495 CDS AEJR02000019.1 166185 164881 -3 - 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229931.peg.1496 CDS AEJR02000019.1 167071 166370 -1 - 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229931.peg.1497 CDS AEJR02000019.1 167092 167790 1 + 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229931.peg.1498 CDS AEJR02000019.1 169341 167848 -3 - 1494 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229931.peg.1499 CDS AEJR02000019.1 169868 169530 -2 - 339 FIG00904093: hypothetical protein - none -
fig|6666666.229931.peg.1500 CDS AEJR02000019.1 170044 171249 1 + 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229931.peg.1501 CDS AEJR02000019.1 171340 173103 1 + 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229931.peg.1502 CDS AEJR02000019.1 173274 173648 3 + 375 probable membrane protein YPO3565 - none -
fig|6666666.229931.peg.1503 CDS AEJR02000019.1 173812 173645 -1 - 168 hypothetical protein - none -
fig|6666666.229931.peg.1504 CDS AEJR02000019.1 173875 175257 1 + 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229931.peg.1505 CDS AEJR02000019.1 176359 175355 -1 - 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229931.peg.1506 CDS AEJR02000019.1 177051 176404 -3 - 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229931.peg.1507 CDS AEJR02000019.1 178606 177035 -1 - 1572 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229931.peg.1508 CDS AEJR02000019.1 179676 178672 -3 - 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229931.peg.1509 CDS AEJR02000019.1 180078 179698 -3 - 381 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229931.peg.1510 CDS AEJR02000019.1 181063 180770 -1 - 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229931.peg.1511 CDS AEJR02000019.1 182011 181067 -1 - 945 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229931.peg.1512 CDS AEJR02000019.1 183888 182134 -3 - 1755 predicted ATP-dependent endonuclease, OLD family - none -
fig|6666666.229931.peg.1513 CDS AEJR02000019.1 184384 183878 -1 - 507 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229931.peg.1514 CDS AEJR02000019.1 187196 184890 -2 - 2307 CRISPR-associated protein Cas3@1@1 CRISPRs
fig|6666666.229931.peg.1515 CDS AEJR02000020.1 691 179 -1 - 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis;
Transport system clustering with HemG
fig|6666666.229931.peg.1516 CDS AEJR02000020.1 2154 691 -3 - 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229931.peg.1517 CDS AEJR02000020.1 2388 2173 -3 - 216 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229931.peg.1518 CDS AEJR02000020.1 2541 2419 -3 - 123 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229931.peg.1519 CDS AEJR02000020.1 2690 2535 -2 - 156 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229931.peg.1520 CDS AEJR02000020.1 2778 3023 3 + 246 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229931.peg.1521 CDS AEJR02000020.1 3343 4614 1 + 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229931.peg.1522 CDS AEJR02000020.1 4630 5313 1 + 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229931.peg.1523 CDS AEJR02000020.1 5443 6672 1 + 1230 Tyrosine-specific transport protein - none -
fig|6666666.229931.peg.1524 CDS AEJR02000021.1 1651 119 -1 - 1533 Na+/H+ antiporter - none -
fig|6666666.229931.peg.1525 CDS AEJR02000021.1 2092 2490 1 + 399 DNA-binding protein H-NS - none -
fig|6666666.229931.peg.1526 CDS AEJR02000021.1 2542 3411 1 + 870 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229931.peg.1527 CDS AEJR02000021.1 3546 4175 3 + 630 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229931.peg.1528 CDS AEJR02000021.1 4291 6120 1 + 1830 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229931.peg.1529 CDS AEJR02000021.1 7199 6462 -2 - 738 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229931.peg.1530 CDS AEJR02000021.1 8390 7221 -2 - 1170 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229931.peg.1531 CDS AEJR02000021.1 9193 8396 -1 - 798 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229931.peg.1532 CDS AEJR02000021.1 10213 9215 -1 - 999 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229931.peg.1533 CDS AEJR02000021.1 10587 11837 3 + 1251 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229931.peg.1534 CDS AEJR02000021.1 11834 13816 2 + 1983 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229931.peg.1535 CDS AEJR02000021.1 13809 15059 3 + 1251 Phosphoglycerate transport system transcriptional regulatory protein PgtA Phosphoglycerate transport system
fig|6666666.229931.peg.1536 CDS AEJR02000021.1 15946 15107 -1 - 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229931.peg.1537 CDS AEJR02000021.1 16737 15955 -3 - 783 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229931.peg.1538 CDS AEJR02000021.1 16844 17158 2 + 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229931.peg.1539 CDS AEJR02000021.1 17155 17868 1 + 714 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229931.peg.1540 CDS AEJR02000021.1 17922 18086 3 + 165 hypothetical protein - none -
fig|6666666.229931.peg.1541 CDS AEJR02000021.1 18277 18486 1 + 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229931.peg.1542 CDS AEJR02000021.1 18998 18552 -2 - 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229931.peg.1543 CDS AEJR02000021.1 19145 20929 2 + 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229931.peg.1544 CDS AEJR02000021.1 21072 21602 3 + 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229931.peg.1545 CDS AEJR02000021.1 22027 22383 1 + 357 DsrE-related protein - none -
fig|6666666.229931.peg.1546 CDS AEJR02000021.1 22454 26119 2 + 3666 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229931.peg.1547 CDS AEJR02000021.1 26119 28098 1 + 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229931.peg.1548 CDS AEJR02000021.1 28111 28707 1 + 597 hypothetical protein - none -
fig|6666666.229931.peg.1549 CDS AEJR02000021.1 28951 29379 1 + 429 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.229931.peg.1550 CDS AEJR02000021.1 29396 29788 2 + 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229931.peg.1551 CDS AEJR02000021.1 29952 29833 -3 - 120 hypothetical protein - none -
fig|6666666.229931.peg.1552 CDS AEJR02000021.1 29951 30736 2 + 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229931.peg.1553 CDS AEJR02000021.1 31284 31030 -3 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229931.peg.1554 CDS AEJR02000021.1 32958 31501 -3 - 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229931.peg.1555 CDS AEJR02000021.1 33188 33967 2 + 780 Protein of unknown function DUF419 - none -
fig|6666666.229931.peg.1556 CDS AEJR02000021.1 36505 34025 -1 - 2481 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229931.peg.1557 CDS AEJR02000021.1 37666 36566 -1 - 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229931.peg.1558 CDS AEJR02000021.1 37972 39429 1 + 1458 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis;
tRNA modification Bacteria;
tRNA modification Bacteria
fig|6666666.229931.peg.1559 CDS AEJR02000021.1 40217 39513 -2 - 705 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229931.peg.1560 CDS AEJR02000021.1 40454 41392 2 + 939 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229931.peg.1561 CDS AEJR02000021.1 42736 43749 1 + 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229931.peg.1562 CDS AEJR02000021.1 43762 44283 1 + 522 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229931.peg.1563 CDS AEJR02000021.1 44283 44531 3 + 249 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229931.peg.1564 CDS AEJR02000021.1 44532 44987 3 + 456 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229931.peg.1565 CDS AEJR02000021.1 45217 45828 1 + 612 Stringent starvation protein A Carbon Starvation
fig|6666666.229931.peg.1566 CDS AEJR02000021.1 45840 46301 3 + 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229931.peg.1567 CDS AEJR02000021.1 47867 46464 -2 - 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.229931.peg.1568 CDS AEJR02000021.1 48063 49292 3 + 1230 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229931.peg.1569 CDS AEJR02000021.1 49369 50097 1 + 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229931.peg.1570 CDS AEJR02000021.1 51760 50186 -1 - 1575 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229931.peg.1571 CDS AEJR02000021.1 52774 51809 -1 - 966 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229931.peg.1572 CDS AEJR02000021.1 53018 54535 2 + 1518 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229931.peg.1573 CDS AEJR02000021.1 54544 55575 1 + 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229931.peg.1574 CDS AEJR02000021.1 55589 56593 2 + 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229931.peg.1575 CDS AEJR02000021.1 56618 57715 2 + 1098 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229931.peg.1576 CDS AEJR02000021.1 57739 58617 1 + 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229931.peg.1577 CDS AEJR02000021.1 58650 58952 3 + 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229931.peg.1578 CDS AEJR02000021.1 60462 59056 -3 - 1407 Pyruvate kinase (EC 2.7.1.40) Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229931.peg.1579 CDS AEJR02000021.1 61737 60748 -3 - 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229931.peg.1580 CDS AEJR02000021.1 63553 61868 -1 - 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229931.peg.1581 CDS AEJR02000021.1 64635 63829 -3 - 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229931.peg.1582 CDS AEJR02000021.1 65831 64638 -2 - 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229931.peg.1583 CDS AEJR02000021.1 66608 65841 -2 - 768 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229931.peg.1584 CDS AEJR02000021.1 67014 67778 3 + 765 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229931.peg.1585 CDS AEJR02000021.1 68992 68594 -1 - 399 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229931.peg.1586 CDS AEJR02000021.1 70799 69003 -2 - 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229931.peg.1587 CDS AEJR02000021.1 71081 70815 -2 - 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229931.peg.1588 CDS AEJR02000021.1 71273 71115 -2 - 159 hypothetical protein - none -
fig|6666666.229931.peg.1589 CDS AEJR02000021.1 71598 71975 3 + 378 hypothetical protein - none -
fig|6666666.229931.peg.1590 CDS AEJR02000021.1 72371 72096 -2 - 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229931.peg.1591 CDS AEJR02000021.1 72684 72520 -3 - 165 hypothetical protein - none -
fig|6666666.229931.peg.1592 CDS AEJR02000021.1 74253 72823 -3 - 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229931.peg.1593 CDS AEJR02000021.1 75263 74262 -2 - 1002 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229931.peg.1594 CDS AEJR02000021.1 75667 75275 -1 - 393 putative - none -
fig|6666666.229931.peg.1595 CDS AEJR02000021.1 76330 75806 -1 - 525 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229931.peg.1596 CDS AEJR02000021.1 78602 78048 -2 - 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) - none -
fig|6666666.229931.peg.1597 CDS AEJR02000021.1 79537 78602 -1 - 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) - none -
fig|6666666.229931.peg.1598 CDS AEJR02000021.1 80220 81095 3 + 876 Probable protease htpX homolog - none -
fig|6666666.229931.peg.1599 CDS AEJR02000021.1 81357 82346 3 + 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229931.peg.1600 CDS AEJR02000021.1 82366 84756 1 + 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229931.peg.1601 CDS AEJR02000021.1 84760 85056 1 + 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229931.peg.1602 CDS AEJR02000021.1 85108 85596 1 + 489 Probable lipoprotein nlpC precursor - none -
fig|6666666.229931.peg.1603 CDS AEJR02000021.1 86656 85691 -1 - 966 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Bacteria
fig|6666666.229931.peg.1604 CDS AEJR02000021.1 86797 87213 1 + 417 putative membrane protein - none -
fig|6666666.229931.peg.1605 CDS AEJR02000021.1 88637 87303 -2 - 1335 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229931.peg.1606 CDS AEJR02000021.1 89311 88790 -1 - 522 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229931.peg.1607 CDS AEJR02000021.1 89810 89313 -2 - 498 FIG00697418: hypothetical protein - none -
fig|6666666.229931.peg.1608 CDS AEJR02000021.1 90021 91022 3 + 1002 ABC transporter, solute-binding protein - none -
fig|6666666.229931.peg.1609 CDS AEJR02000021.1 91658 92035 2 + 378 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229931.peg.1610 CDS AEJR02000021.1 92032 92781 1 + 750 ABC transporter ATP-binding protein - none -
fig|6666666.229931.peg.1611 CDS AEJR02000021.1 92876 93736 2 + 861 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229931.peg.1612 CDS AEJR02000021.1 93764 95272 2 + 1509 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229931.peg.1613 CDS AEJR02000021.1 95600 95391 -2 - 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229931.peg.1614 CDS AEJR02000021.1 96716 95682 -2 - 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229931.peg.1615 CDS AEJR02000021.1 97523 96729 -2 - 795 Glutathione synthetase (EC 6.3.2.3) Cluster containing Glutathione synthetase;
Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229931.peg.1616 CDS AEJR02000021.1 98542 97523 -1 - 1020 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229931.peg.1617 CDS AEJR02000021.1 98692 98561 -1 - 132 hypothetical protein - none -
fig|6666666.229931.peg.1618 CDS AEJR02000021.1 100088 98670 -2 - 1419 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229931.peg.1619 CDS AEJR02000021.1 100965 100108 -3 - 858 ABC-type multidrug transport system, permease component - none -
fig|6666666.229931.peg.1620 CDS AEJR02000021.1 101236 101003 -1 - 234 ABC-type multidrug transport system, permease component - none -
fig|6666666.229931.peg.1621 CDS AEJR02000021.1 103331 101238 -2 - 2094 ABC-type multidrug transport system, permease component - none -
fig|6666666.229931.peg.1622 CDS AEJR02000021.1 103980 103300 -3 - 681 ABC-type multidrug transport system, permease component - none -
fig|6666666.229931.peg.1623 CDS AEJR02000021.1 104942 103983 -2 - 960 HlyD family secretion protein - none -
fig|6666666.229931.peg.1624 CDS AEJR02000021.1 105239 105063 -2 - 177 hypothetical protein - none -
fig|6666666.229931.peg.1625 CDS AEJR02000021.1 105293 105679 2 + 387 Transcriptional regulator, TetR family - none -
fig|6666666.229931.peg.1626 CDS AEJR02000021.1 106920 105730 -3 - 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229931.peg.1627 CDS AEJR02000021.1 107342 109951 2 + 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229931.peg.1628 CDS AEJR02000021.1 110023 111042 1 + 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229931.peg.1629 CDS AEJR02000021.1 111142 111591 1 + 450 COG0613, Predicted metal-dependent phosphoesterases (PHP family) tRNA modification Bacteria
fig|6666666.229931.peg.1630 CDS AEJR02000021.1 111785 114391 2 + 2607 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229931.peg.1631 CDS AEJR02000021.1 115312 114476 -1 - 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229931.peg.1632 CDS AEJR02000021.1 116371 115439 -1 - 933 Universal stress protein E Universal stress protein family
fig|6666666.229931.peg.1633 CDS AEJR02000021.1 117263 116490 -2 - 774 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229931.peg.1634 CDS AEJR02000021.1 117371 117541 2 + 171 hypothetical protein - none -
fig|6666666.229931.peg.1635 CDS AEJR02000021.1 118100 117603 -2 - 498 Ferritin-like protein 2 - none -
fig|6666666.229931.peg.1636 CDS AEJR02000021.1 118601 118116 -2 - 486 Ferritin-like protein 2 - none -
fig|6666666.229931.peg.1637 CDS AEJR02000021.1 119712 119422 -3 - 291 FIG00698722: hypothetical protein - none -
fig|6666666.229931.peg.1638 CDS AEJR02000021.1 120350 119724 -2 - 627 hypothetical protein - none -
fig|6666666.229931.peg.1639 CDS AEJR02000022.1 42 1184 3 + 1143 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229931.peg.1640 CDS AEJR02000024.1 159 46 -3 - 114 hypothetical protein - none -
fig|6666666.229931.peg.1641 CDS AEJR02000024.1 1210 2640 1 + 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229931.peg.1642 CDS AEJR02000024.1 2653 3582 1 + 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229931.peg.1643 CDS AEJR02000024.1 3579 4346 3 + 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229931.peg.1644 CDS AEJR02000024.1 4371 5651 3 + 1281 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229931.peg.1645 CDS AEJR02000024.1 5735 7018 2 + 1284 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229931.peg.1646 CDS AEJR02000024.1 7056 7973 3 + 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) - none -
fig|6666666.229931.peg.1647 CDS AEJR02000024.1 8171 8905 2 + 735 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229931.peg.1648 CDS AEJR02000024.1 8880 9332 3 + 453 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229931.peg.1649 CDS AEJR02000024.1 9466 11346 1 + 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229931.peg.1650 CDS AEJR02000024.1 11412 11756 3 + 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352
fig|6666666.229931.peg.1651 CDS AEJR02000024.1 11893 13026 1 + 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
CBSS-584.1.peg.1352;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229931.peg.1652 CDS AEJR02000024.1 13028 13708 2 + 681 FIG009095: D,D-carboxypeptidase family protein CBSS-584.1.peg.1352
fig|6666666.229931.peg.1653 CDS AEJR02000024.1 13954 14577 1 + 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229931.peg.1654 CDS AEJR02000024.1 14628 15452 3 + 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229931.peg.1655 CDS AEJR02000024.1 16784 15960 -2 - 825 FIG00711691: hypothetical protein - none -
fig|6666666.229931.peg.1656 CDS AEJR02000024.1 17221 16757 -1 - 465 FIG00710847: hypothetical protein - none -
fig|6666666.229931.peg.1657 CDS AEJR02000024.1 17405 17542 2 + 138 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229931.peg.1658 CDS AEJR02000024.1 17576 18280 2 + 705 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229931.peg.1659 CDS AEJR02000024.1 18398 19612 2 + 1215 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster;
ECF class transporters
fig|6666666.229931.peg.1660 CDS AEJR02000024.1 20719 19691 -1 - 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.1661 CDS AEJR02000024.1 20990 23137 2 + 2148 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229931.peg.1662 CDS AEJR02000024.1 23578 23234 -1 - 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229931.peg.1663 CDS AEJR02000024.1 23980 23588 -1 - 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229931.peg.1664 CDS AEJR02000024.1 24762 23992 -3 - 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229931.peg.1665 CDS AEJR02000024.1 26575 24767 -1 - 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229931.peg.1666 CDS AEJR02000024.1 26883 27854 3 + 972 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229931.peg.1667 CDS AEJR02000024.1 28687 27920 -1 - 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229931.peg.1668 CDS AEJR02000024.1 29670 28687 -3 - 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229931.peg.1669 CDS AEJR02000024.1 30659 29670 -2 - 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229931.peg.1670 CDS AEJR02000024.1 31552 30659 -1 - 894 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229931.peg.1671 CDS AEJR02000024.1 32692 31622 -1 - 1071 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229931.peg.1672 CDS AEJR02000024.1 32763 33206 3 + 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229931.peg.1673 CDS AEJR02000024.1 33291 33893 3 + 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229931.peg.1674 CDS AEJR02000024.1 33925 35862 1 + 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229931.peg.1675 CDS AEJR02000024.1 35876 36007 2 + 132 hypothetical protein - none -
fig|6666666.229931.peg.1676 CDS AEJR02000024.1 36035 36373 2 + 339 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.229931.peg.1677 CDS AEJR02000024.1 36849 37436 3 + 588 Integrase - none -
fig|6666666.229931.peg.1678 CDS AEJR02000024.1 37405 37710 1 + 306 hypothetical protein - none -
fig|6666666.229931.peg.1679 CDS AEJR02000024.1 38291 38545 2 + 255 hypothetical protein - none -
fig|6666666.229931.peg.1680 CDS AEJR02000024.1 39574 38801 -1 - 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229931.peg.1681 CDS AEJR02000024.1 39860 39552 -2 - 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229931.peg.1682 CDS AEJR02000024.1 42109 39893 -1 - 2217 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229931.peg.1683 CDS AEJR02000024.1 42611 42315 -2 - 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229931.peg.1684 CDS AEJR02000024.1 43084 42614 -1 - 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229931.peg.1685 CDS AEJR02000024.1 43639 43088 -1 - 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229931.peg.1686 CDS AEJR02000024.1 44403 43645 -3 - 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229931.peg.1687 CDS AEJR02000024.1 44675 44899 2 + 225 hypothetical protein - none -
fig|6666666.229931.peg.1688 CDS AEJR02000024.1 44903 45322 2 + 420 Outer membrane protein W precursor - none -
fig|6666666.229931.peg.1689 CDS AEJR02000024.1 47065 45389 -1 - 1677 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229931.peg.1690 CDS AEJR02000024.1 48056 47139 -2 - 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229931.peg.1691 CDS AEJR02000024.1 48229 48101 -1 - 129 hypothetical protein - none -
fig|6666666.229931.peg.1692 CDS AEJR02000024.1 48197 48775 2 + 579 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229931.peg.1693 CDS AEJR02000024.1 51957 48886 -3 - 3072 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229931.peg.1694 CDS AEJR02000024.1 54165 52147 -3 - 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229931.peg.1695 CDS AEJR02000024.1 54335 55555 2 + 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229931.peg.1696 CDS AEJR02000024.1 55670 55536 -2 - 135 hypothetical protein - none -
fig|6666666.229931.peg.1697 CDS AEJR02000024.1 55696 57555 1 + 1860 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229931.peg.1698 CDS AEJR02000024.1 58639 57629 -1 - 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229931.peg.1699 CDS AEJR02000024.1 60196 58658 -1 - 1539 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229931.peg.1700 CDS AEJR02000024.1 61263 60271 -3 - 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229931.peg.1701 CDS AEJR02000024.1 62491 61478 -1 - 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229931.peg.1702 CDS AEJR02000024.1 62743 63786 1 + 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229931.peg.1703 CDS AEJR02000024.1 63853 65007 1 + 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229931.peg.1704 CDS AEJR02000024.1 65001 66032 3 + 1032 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229931.peg.1705 CDS AEJR02000024.1 67796 66297 -2 - 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229931.peg.1706 CDS AEJR02000024.1 69508 68075 -1 - 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229931.peg.1707 CDS AEJR02000024.1 70907 69495 -2 - 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229931.peg.1708 CDS AEJR02000024.1 72603 71101 -3 - 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229931.peg.1709 CDS AEJR02000024.1 73493 72618 -2 - 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229931.peg.1710 CDS AEJR02000024.1 73777 73490 -1 - 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229931.peg.1711 CDS AEJR02000024.1 74824 73817 -1 - 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229931.peg.1712 CDS AEJR02000024.1 74990 74862 -2 - 129 hypothetical protein - none -
fig|6666666.229931.peg.1713 CDS AEJR02000024.1 75070 75966 1 + 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229931.peg.1714 CDS AEJR02000024.1 76359 77903 3 + 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229931.peg.1715 CDS AEJR02000024.1 78184 77966 -1 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229931.peg.1716 CDS AEJR02000024.1 78239 78361 2 + 123 hypothetical protein - none -
fig|6666666.229931.peg.1717 CDS AEJR02000024.1 78404 79711 2 + 1308 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229931.peg.1718 CDS AEJR02000024.1 79723 80148 1 + 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229931.peg.1719 CDS AEJR02000024.1 80284 81429 1 + 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229931.peg.1720 CDS AEJR02000024.1 81422 81541 2 + 120 hypothetical protein - none -
fig|6666666.229931.peg.1721 CDS AEJR02000024.1 82631 81519 -2 - 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229931.peg.1722 CDS AEJR02000024.1 82804 84864 1 + 2061 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229931.peg.1723 CDS AEJR02000024.1 85192 84998 -1 - 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229931.peg.1724 CDS AEJR02000024.1 85533 85192 -3 - 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229931.peg.1725 CDS AEJR02000024.1 87404 85545 -2 - 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229931.peg.1726 CDS AEJR02000024.1 87946 87425 -1 - 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229931.peg.1727 CDS AEJR02000024.1 88281 87958 -3 - 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229931.peg.1728 CDS AEJR02000024.1 88796 88413 -2 - 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229931.peg.1729 CDS AEJR02000024.1 90070 88856 -1 - 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229931.peg.1730 CDS AEJR02000024.1 90597 90124 -3 - 474 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229931.peg.1731 CDS AEJR02000024.1 91400 90675 -2 - 726 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Bacteria
fig|6666666.229931.peg.1732 CDS AEJR02000024.1 91551 92351 3 + 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229931.peg.1733 CDS AEJR02000024.1 94515 92404 -3 - 2112 unknown - none -
fig|6666666.229931.peg.1734 CDS AEJR02000024.1 95840 94794 -2 - 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229931.peg.1735 CDS AEJR02000024.1 97913 95856 -2 - 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229931.peg.1736 CDS AEJR02000024.1 98693 97941 -2 - 753 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229931.peg.1737 CDS AEJR02000024.1 100186 99146 -1 - 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229931.peg.1738 CDS AEJR02000024.1 100495 101145 1 + 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229931.peg.1739 CDS AEJR02000024.1 101155 101739 1 + 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229931.peg.1740 CDS AEJR02000024.1 101740 102942 1 + 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229931.peg.1741 CDS AEJR02000024.1 102944 104140 2 + 1197 Sugar efflux transporter SotB - none -
fig|6666666.229931.peg.1742 CDS AEJR02000024.1 105742 104210 -1 - 1533 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229931.peg.1743 CDS AEJR02000024.1 106030 107013 1 + 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229931.peg.1744 CDS AEJR02000024.1 107036 107326 2 + 291 hypothetical protein - none -
fig|6666666.229931.peg.1745 CDS AEJR02000024.1 108689 107391 -2 - 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229931.peg.1746 CDS AEJR02000024.1 109742 108777 -2 - 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229931.peg.1747 CDS AEJR02000024.1 111276 109756 -3 - 1521 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229931.peg.1748 CDS AEJR02000024.1 111417 112892 3 + 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229931.peg.1749 CDS AEJR02000024.1 113009 113656 2 + 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229931.peg.1750 CDS AEJR02000024.1 113672 114370 2 + 699 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229931.peg.1751 CDS AEJR02000024.1 114443 114814 2 + 372 Mobile element protein - none -
fig|6666666.229931.peg.1752 CDS AEJR02000024.1 115017 115343 3 + 327 Mobile element protein - none -
fig|6666666.229931.peg.1753 CDS AEJR02000024.1 116254 115712 -1 - 543 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229931.peg.1754 CDS AEJR02000024.1 116608 116727 1 + 120 Haemophilus-specific protein, uncharacterized - none -
fig|6666666.229931.peg.1755 CDS AEJR02000024.1 117041 117220 2 + 180 hypothetical protein - none -
fig|6666666.229931.peg.1756 CDS AEJR02000024.1 117793 118047 1 + 255 hypothetical protein - none -
fig|6666666.229931.peg.1757 CDS AEJR02000024.1 118050 118394 3 + 345 Programmed cell death toxin MazF - none -
fig|6666666.229931.peg.1758 CDS AEJR02000024.1 118963 119631 1 + 669 Cytolethal distending toxin subunit A Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229931.peg.1759 CDS AEJR02000024.1 119646 120497 3 + 852 Cytolethal distending toxin subunit B Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229931.peg.1760 CDS AEJR02000024.1 120508 121068 1 + 561 Cytolethal distending toxin subunit C Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229931.peg.1761 CDS AEJR02000024.1 122429 122286 -2 - 144 hypothetical protein - none -
fig|6666666.229931.peg.1762 CDS AEJR02000024.1 123641 123084 -2 - 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.1763 CDS AEJR02000024.1 123896 125086 2 + 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229931.peg.1764 CDS AEJR02000024.1 125300 126352 2 + 1053 Outer membrane protein P2 precursor (OMP P2) - none -
fig|6666666.229931.peg.1765 CDS AEJR02000024.1 126496 126753 1 + 258 hypothetical protein - none -
fig|6666666.229931.peg.1766 CDS AEJR02000024.1 126753 127100 3 + 348 Programmed cell death toxin ChpB - none -
fig|6666666.229931.peg.1767 CDS AEJR02000024.1 128305 127178 -1 - 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229931.peg.1768 CDS AEJR02000024.1 130640 128739 -2 - 1902 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229931.peg.1769 CDS AEJR02000024.1 130926 132359 3 + 1434 Putative GTP-binding protein YdgA - none -
fig|6666666.229931.peg.1770 CDS AEJR02000024.1 134452 132719 -1 - 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229931.peg.1771 CDS AEJR02000024.1 134549 135136 2 + 588 Protein yecM - none -
fig|6666666.229931.peg.1772 CDS AEJR02000024.1 135178 135633 1 + 456 Outer membrane lipoprotein - none -
fig|6666666.229931.peg.1773 CDS AEJR02000024.1 135773 136855 2 + 1083 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.229931.peg.1774 CDS AEJR02000024.1 136895 137794 2 + 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.229931.peg.1775 CDS AEJR02000024.1 137804 138658 2 + 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation
fig|6666666.229931.peg.1776 CDS AEJR02000024.1 138838 139347 1 + 510 probable lipoprotein NlpC - none -
fig|6666666.229931.peg.1777 CDS AEJR02000024.1 139995 139744 -3 - 252 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229931.peg.1778 CDS AEJR02000024.1 140079 140741 3 + 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229931.peg.1779 CDS AEJR02000024.1 141308 140763 -2 - 546 FIG00696317: hypothetical protein - none -
fig|6666666.229931.peg.1780 CDS AEJR02000024.1 141999 141532 -3 - 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229931.peg.1781 CDS AEJR02000024.1 143349 142012 -3 - 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229931.peg.1782 CDS AEJR02000024.1 144154 143378 -1 - 777 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229931.peg.1783 CDS AEJR02000024.1 145409 144375 -2 - 1035 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229931.peg.1784 CDS AEJR02000024.1 145787 145533 -2 - 255 hypothetical protein - none -
fig|6666666.229931.peg.1785 CDS AEJR02000024.1 146209 146658 1 + 450 ImpA - none -
fig|6666666.229931.peg.1786 CDS AEJR02000024.1 147095 146931 -2 - 165 hypothetical protein - none -
fig|6666666.229931.peg.1787 CDS AEJR02000024.1 148856 147390 -2 - 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.229931.peg.1788 CDS AEJR02000024.1 148998 149930 3 + 933 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin biosynthesis;
Biotin synthesis cluster;
Biotin synthesis cluster
fig|6666666.229931.peg.1789 CDS AEJR02000024.1 150017 150220 2 + 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229931.peg.1790 CDS AEJR02000025.1 470 219 -2 - 252 Transcriptional regulator, XRE family - none -
fig|6666666.229931.peg.1791 CDS AEJR02000025.1 621 2258 3 + 1638 NAD-dependent malic enzyme (EC 1.1.1.38) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229931.peg.1792 CDS AEJR02000025.1 3677 2478 -2 - 1200 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229931.peg.1793 CDS AEJR02000025.1 4723 3674 -1 - 1050 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229931.peg.1794 CDS AEJR02000025.1 5250 4720 -3 - 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229931.peg.1795 CDS AEJR02000025.1 7153 5243 -1 - 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229931.peg.1796 CDS AEJR02000025.1 7175 7543 2 + 369 hypothetical protein - none -
fig|6666666.229931.peg.1797 CDS AEJR02000025.1 8705 7740 -2 - 966 NrfD protein - none -
fig|6666666.229931.peg.1798 CDS AEJR02000025.1 9379 8702 -1 - 678 NrfC protein - none -
fig|6666666.229931.peg.1799 CDS AEJR02000025.1 10041 9376 -3 - 666 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229931.peg.1800 CDS AEJR02000025.1 11638 10115 -1 - 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229931.peg.1801 CDS AEJR02000025.1 12505 12215 -1 - 291 hypothetical protein - none -
fig|6666666.229931.peg.1802 CDS AEJR02000025.1 13071 12523 -3 - 549 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229931.peg.1803 CDS AEJR02000025.1 14204 13281 -2 - 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229931.peg.1804 CDS AEJR02000025.1 14656 14204 -1 - 453 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229931.peg.1805 CDS AEJR02000025.1 15300 14755 -3 - 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229931.peg.1806 CDS AEJR02000025.1 17287 15329 -1 - 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229931.peg.1807 CDS AEJR02000025.1 17805 17287 -3 - 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229931.peg.1808 CDS AEJR02000025.1 18008 17802 -2 - 207 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229931.peg.1809 CDS AEJR02000025.1 18763 18026 -1 - 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229931.peg.1810 CDS AEJR02000025.1 19439 18774 -2 - 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229931.peg.1811 CDS AEJR02000025.1 20079 19444 -3 - 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229931.peg.1812 CDS AEJR02000025.1 21036 20251 -3 - 786 Bicyclomycin resistance protein - none -
fig|6666666.229931.peg.1813 CDS AEJR02000025.1 21443 21033 -2 - 411 Bicyclomycin resistance protein - none -
fig|6666666.229931.peg.1814 CDS AEJR02000025.1 22149 21448 -3 - 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229931.peg.1815 CDS AEJR02000025.1 22191 22373 3 + 183 hypothetical protein - none -
fig|6666666.229931.peg.1816 CDS AEJR02000025.1 22366 24630 1 + 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229931.peg.1817 CDS AEJR02000025.1 24775 25419 1 + 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229931.peg.1818 CDS AEJR02000025.1 25830 26621 3 + 792 putative lipoprotein - none -
fig|6666666.229931.peg.1819 CDS AEJR02000025.1 27650 26823 -2 - 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229931.peg.1820 CDS AEJR02000025.1 27790 28116 1 + 327 FIG00904084: hypothetical protein - none -
fig|6666666.229931.peg.1821 CDS AEJR02000025.1 28920 28324 -3 - 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.1822 CDS AEJR02000025.1 29017 29370 1 + 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229931.peg.1823 CDS AEJR02000025.1 29391 30821 3 + 1431 Transglycosylase, Slt family - none -
fig|6666666.229931.peg.1824 CDS AEJR02000025.1 30832 30978 1 + 147 hypothetical protein - none -
fig|6666666.229931.peg.1825 CDS AEJR02000025.1 31560 31021 -3 - 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229931.peg.1826 CDS AEJR02000025.1 33128 31584 -2 - 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229931.peg.1827 CDS AEJR02000025.1 33323 34054 2 + 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229931.peg.1828 CDS AEJR02000025.1 35389 34175 -1 - 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229931.peg.1829 CDS AEJR02000025.1 35506 36810 1 + 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229931.peg.1830 CDS AEJR02000025.1 36801 38507 3 + 1707 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229931.peg.1831 CDS AEJR02000025.1 38560 39309 1 + 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229931.peg.1832 CDS AEJR02000025.1 39405 39674 3 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229931.peg.1833 CDS AEJR02000025.1 39882 41036 3 + 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229931.peg.1834 CDS AEJR02000025.1 41105 41605 2 + 501 Protein sprT - none -
fig|6666666.229931.peg.1835 CDS AEJR02000025.1 41762 43003 2 + 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229931.peg.1836 CDS AEJR02000025.1 43096 44460 1 + 1365 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229931.peg.1837 CDS AEJR02000025.1 45690 44641 -3 - 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229931.peg.1838 CDS AEJR02000025.1 45985 47124 1 + 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229931.peg.1839 CDS AEJR02000025.1 47146 47697 1 + 552 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229931.peg.1840 CDS AEJR02000025.1 47841 48896 3 + 1056 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229931.peg.1841 CDS AEJR02000025.1 48908 50011 2 + 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229931.peg.1842 CDS AEJR02000025.1 50033 51310 2 + 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229931.peg.1843 CDS AEJR02000025.1 51321 51935 3 + 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229931.peg.1844 CDS AEJR02000025.1 51988 52440 1 + 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229931.peg.1845 CDS AEJR02000025.1 53150 52446 -2 - 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229931.peg.1846 CDS AEJR02000025.1 53136 53273 3 + 138 hypothetical protein - none -
fig|6666666.229931.peg.1847 CDS AEJR02000025.1 54523 53270 -1 - 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229931.peg.1848 CDS AEJR02000025.1 55273 54647 -1 - 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229931.peg.1849 CDS AEJR02000025.1 57255 55408 -3 - 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229931.peg.1850 CDS AEJR02000025.1 59661 57388 -3 - 2274 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229931.peg.1851 CDS AEJR02000025.1 59789 59658 -2 - 132 hypothetical protein - none -
fig|6666666.229931.peg.1852 CDS AEJR02000025.1 59893 61494 1 + 1602 Dca - none -
fig|6666666.229931.peg.1853 CDS AEJR02000025.1 61751 62317 2 + 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229931.peg.1854 CDS AEJR02000025.1 62327 63568 2 + 1242 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229931.peg.1855 CDS AEJR02000025.1 63954 63631 -3 - 324 FIG074102: hypothetical protein - none -
fig|6666666.229931.peg.1856 CDS AEJR02000025.1 64111 63947 -1 - 165 Phage-related protein - none -
fig|6666666.229931.peg.1857 CDS AEJR02000025.1 65259 64414 -3 - 846 membrane protein, putative - none -
fig|6666666.229931.peg.1858 CDS AEJR02000025.1 67491 65332 -3 - 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229931.peg.1859 CDS AEJR02000025.1 67790 67578 -2 - 213 Copper chaperone Copper homeostasis
fig|6666666.229931.peg.1860 CDS AEJR02000025.1 67885 68271 1 + 387 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229931.peg.1861 CDS AEJR02000025.1 68542 69624 1 + 1083 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229931.peg.1862 CDS AEJR02000025.1 69638 69859 2 + 222 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229931.peg.1863 CDS AEJR02000025.1 71023 70187 -1 - 837 COG1720: Uncharacterized conserved protein tRNA modification Bacteria
fig|6666666.229931.peg.1864 CDS AEJR02000025.1 71136 72056 3 + 921 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229931.peg.1865 CDS AEJR02000025.1 72107 72607 2 + 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229931.peg.1866 CDS AEJR02000025.1 72628 72792 1 + 165 hypothetical protein - none -
fig|6666666.229931.peg.1867 CDS AEJR02000025.1 72797 73762 2 + 966 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229931.peg.1868 CDS AEJR02000025.1 74269 73736 -1 - 534 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229931.peg.1869 CDS AEJR02000025.1 74390 75751 2 + 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229931.peg.1870 CDS AEJR02000025.1 75990 76529 3 + 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229931.peg.1871 CDS AEJR02000025.1 77738 76599 -2 - 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229931.peg.1872 CDS AEJR02000025.1 79009 77735 -1 - 1275 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229931.peg.1873 CDS AEJR02000025.1 80244 79141 -3 - 1104 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229931.peg.1874 CDS AEJR02000025.1 80465 81160 2 + 696 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229931.peg.1875 CDS AEJR02000025.1 83039 81237 -2 - 1803 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229931.peg.1876 CDS AEJR02000025.1 84053 83151 -2 - 903 Lipoprotein nlpI precursor - none -
fig|6666666.229931.peg.1877 CDS AEJR02000025.1 86369 84138 -2 - 2232 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229931.peg.1878 CDS AEJR02000025.1 86561 87031 2 + 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229931.peg.1879 CDS AEJR02000025.1 88158 87505 -3 - 654 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229931.peg.1880 CDS AEJR02000025.1 88181 88633 2 + 453 Type IV pilin PilA Type IV pilus
fig|6666666.229931.peg.1881 CDS AEJR02000025.1 88660 90069 1 + 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229931.peg.1882 CDS AEJR02000025.1 90062 91285 2 + 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229931.peg.1883 CDS AEJR02000025.1 91285 91971 1 + 687 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229931.peg.1884 CDS AEJR02000025.1 92021 92644 2 + 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229931.peg.1885 CDS AEJR02000025.1 92634 92846 3 + 213 FIG003276: zinc-binding protein - none -
fig|6666666.229931.peg.1886 CDS AEJR02000025.1 92846 93118 2 + 273 FIG00904058: hypothetical protein - none -
fig|6666666.229931.peg.1887 CDS AEJR02000025.1 93515 94888 2 + 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229931.peg.1888 CDS AEJR02000025.1 95117 95440 2 + 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229931.peg.1889 CDS AEJR02000025.1 95895 96143 3 + 249 unknown - none -
fig|6666666.229931.peg.1890 CDS AEJR02000025.1 97058 96759 -2 - 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229931.peg.1891 CDS AEJR02000025.1 98101 97052 -1 - 1050 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229931.peg.1892 CDS AEJR02000025.1 99230 98346 -2 - 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229931.peg.1893 CDS AEJR02000025.1 99785 99243 -2 - 543 Protein involved in cell division - none -
fig|6666666.229931.peg.1894 CDS AEJR02000025.1 101240 99804 -2 - 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229931.peg.1895 CDS AEJR02000025.1 101509 101237 -1 - 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229931.peg.1896 CDS AEJR02000025.1 102975 101533 -3 - 1443 FOG: TPR repeat - none -
fig|6666666.229931.peg.1897 CDS AEJR02000025.1 103804 103040 -1 - 765 Periplasmic protein TonB, links inner and outer membranes - none -
fig|6666666.229931.peg.1898 CDS AEJR02000025.1 103993 103859 -1 - 135 hypothetical protein - none -
fig|6666666.229931.peg.1899 CDS AEJR02000025.1 105447 104101 -3 - 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229931.peg.1900 CDS AEJR02000025.1 105957 105490 -3 - 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229931.peg.1901 CDS AEJR02000025.1 105974 106126 2 + 153 hypothetical protein - none -
fig|6666666.229931.peg.1902 CDS AEJR02000025.1 106557 106081 -3 - 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229931.peg.1903 CDS AEJR02000025.1 107657 106656 -2 - 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229931.peg.1904 CDS AEJR02000025.1 107967 107638 -3 - 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229931.peg.1905 CDS AEJR02000025.1 108368 107949 -2 - 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229931.peg.1906 CDS AEJR02000025.1 109265 108408 -2 - 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229931.peg.1907 CDS AEJR02000025.1 110144 109377 -2 - 768 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229931.peg.1908 CDS AEJR02000025.1 110317 110760 1 + 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229931.peg.1909 CDS AEJR02000025.1 112201 110834 -1 - 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229931.peg.1910 CDS AEJR02000025.1 112654 112220 -1 - 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229931.peg.1911 CDS AEJR02000025.1 113227 112667 -1 - 561 Protein of unknown function DUF414 - none -
fig|6666666.229931.peg.1912 CDS AEJR02000025.1 113855 113328 -2 - 528 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229931.peg.1913 CDS AEJR02000025.1 115032 114181 -3 - 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229931.peg.1914 CDS AEJR02000025.1 115826 115029 -2 - 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229931.peg.1915 CDS AEJR02000025.1 116632 115835 -1 - 798 Protein of unknown function DUF81 - none -
fig|6666666.229931.peg.1916 CDS AEJR02000025.1 117234 116635 -3 - 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229931.peg.1917 CDS AEJR02000025.1 117454 117873 1 + 420 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229931.peg.1918 CDS AEJR02000025.1 117884 119392 2 + 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229931.peg.1919 CDS AEJR02000025.1 119389 120285 1 + 897 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229931.peg.1920 CDS AEJR02000025.1 120375 121256 3 + 882 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229931.peg.1921 CDS AEJR02000025.1 121256 121387 2 + 132 hypothetical protein - none -
fig|6666666.229931.peg.1922 CDS AEJR02000025.1 121339 122271 1 + 933 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229931.peg.1923 CDS AEJR02000025.1 122578 122369 -1 - 210 Cold shock protein CspG Cold shock, CspA family of proteins
fig|6666666.229931.peg.1924 CDS AEJR02000025.1 123882 123133 -3 - 750 Phage tail fibers Phage tail fiber proteins
fig|6666666.229931.peg.1925 CDS AEJR02000025.1 124511 123882 -2 - 630 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229931.peg.1926 CDS AEJR02000025.1 124618 124794 1 + 177 hypothetical protein; Hypothetical gene - none -
fig|6666666.229931.peg.1927 CDS AEJR02000025.1 124839 125252 3 + 414 hypothetical protein - none -
fig|6666666.229931.peg.1928 CDS AEJR02000025.1 125819 125283 -2 - 537 FIG00643583: hypothetical protein - none -
fig|6666666.229931.peg.1929 CDS AEJR02000025.1 126027 125770 -3 - 258 FIG01218156: hypothetical protein - none -
fig|6666666.229931.peg.1930 CDS AEJR02000025.1 126098 127132 2 + 1035 Phage integrase - none -
fig|6666666.229931.peg.1931 CDS AEJR02000025.1 128755 127310 -1 - 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229931.peg.1932 CDS AEJR02000025.1 129226 130014 1 + 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229931.peg.1933 CDS AEJR02000025.1 130127 131503 2 + 1377 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229931.peg.1934 CDS AEJR02000025.1 131804 133153 2 + 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229931.peg.1935 CDS AEJR02000025.1 133642 135096 1 + 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229931.peg.1936 CDS AEJR02000025.1 135927 135769 -3 - 159 hypothetical protein - none -
fig|6666666.229931.peg.1937 CDS AEJR02000025.1 139650 136174 -3 - 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229931.peg.1938 CDS AEJR02000025.1 139615 139794 1 + 180 hypothetical protein - none -
fig|6666666.229931.peg.1939 CDS AEJR02000025.1 139849 141636 1 + 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229931.peg.1940 CDS AEJR02000025.1 141653 141769 2 + 117 hypothetical protein - none -
fig|6666666.229931.peg.1941 CDS AEJR02000025.1 142519 147882 1 + 5364 Autotransporter adhesin - none -
fig|6666666.229931.peg.1942 CDS AEJR02000025.1 149957 150208 2 + 252 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229931.peg.1943 CDS AEJR02000025.1 150389 150508 2 + 120 hypothetical protein - none -
fig|6666666.229931.peg.1944 CDS AEJR02000025.1 150776 150651 -2 - 126 hypothetical protein - none -
fig|6666666.229931.peg.1945 CDS AEJR02000025.1 150810 151277 3 + 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229931.peg.1946 CDS AEJR02000025.1 152092 151304 -1 - 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229931.peg.1947 CDS AEJR02000025.1 152376 152095 -3 - 282 hypothetical protein - none -
fig|6666666.229931.peg.1948 CDS AEJR02000025.1 152524 152369 -1 - 156 hypothetical protein - none -
fig|6666666.229931.peg.1949 CDS AEJR02000025.1 153130 152618 -1 - 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229931.peg.1950 CDS AEJR02000025.1 153200 154609 2 + 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229931.peg.1951 CDS AEJR02000025.1 155719 154757 -1 - 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229931.peg.1952 CDS AEJR02000025.1 156422 155784 -2 - 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229931.peg.1953 CDS AEJR02000025.1 156767 156468 -2 - 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229931.peg.1954 CDS AEJR02000025.1 158030 156840 -2 - 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229931.peg.1955 CDS AEJR02000025.1 158918 158061 -2 - 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229931.peg.1956 CDS AEJR02000025.1 160082 158967 -2 - 1116 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229931.peg.1957 CDS AEJR02000025.1 161187 160075 -3 - 1113 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229931.peg.1958 CDS AEJR02000025.1 162035 161187 -2 - 849 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229931.peg.1959 CDS AEJR02000025.1 162584 162048 -2 - 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229931.peg.1960 CDS AEJR02000025.1 162883 162575 -1 - 309 Iojap protein - none -
fig|6666666.229931.peg.1961 CDS AEJR02000025.1 164206 162950 -1 - 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229931.peg.1962 CDS AEJR02000025.1 164530 165768 1 + 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229931.peg.1963 CDS AEJR02000025.1 167128 165893 -1 - 1236 Major facilitator superfamily (MFS) transport protein - none -
fig|6666666.229931.peg.1964 CDS AEJR02000025.1 167215 167328 1 + 114 hypothetical protein - none -
fig|6666666.229931.peg.1965 CDS AEJR02000025.1 167593 167363 -1 - 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.1966 CDS AEJR02000025.1 168595 167867 -1 - 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229931.peg.1967 CDS AEJR02000025.1 169558 168620 -1 - 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229931.peg.1968 CDS AEJR02000025.1 170615 169665 -2 - 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229931.peg.1969 CDS AEJR02000025.1 171681 170662 -3 - 1020 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.1970 CDS AEJR02000025.1 171878 171708 -2 - 171 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.229931.peg.1971 CDS AEJR02000025.1 172419 171895 -3 - 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229931.peg.1972 CDS AEJR02000025.1 173018 172491 -2 - 528 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229931.peg.1973 CDS AEJR02000025.1 173867 173127 -2 - 741 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229931.peg.1974 CDS AEJR02000025.1 174535 173885 -1 - 651 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229931.peg.1975 CDS AEJR02000025.1 175691 174516 -2 - 1176 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229931.peg.1976 CDS AEJR02000025.1 176814 175684 -3 - 1131 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229931.peg.1977 CDS AEJR02000025.1 176972 176778 -2 - 195 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229931.peg.1978 CDS AEJR02000025.1 177195 178064 3 + 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229931.peg.1979 CDS AEJR02000025.1 178090 178722 1 + 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229931.peg.1980 CDS AEJR02000025.1 179028 178786 -3 - 243 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229931.peg.1981 CDS AEJR02000025.1 179522 179022 -2 - 501 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229931.peg.1982 CDS AEJR02000025.1 179700 179524 -3 - 177 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229931.peg.1983 CDS AEJR02000025.1 179758 180543 1 + 786 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229931.peg.1984 CDS AEJR02000025.1 180545 181009 2 + 465 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229931.peg.1985 CDS AEJR02000025.1 181049 181534 2 + 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229931.peg.1986 CDS AEJR02000025.1 182964 181654 -3 - 1311 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229931.peg.1987 CDS AEJR02000025.1 182918 183058 2 + 141 hypothetical protein - none -
fig|6666666.229931.peg.1988 CDS AEJR02000025.1 183579 183055 -3 - 525 FIG00696143: hypothetical protein - none -
fig|6666666.229931.peg.1989 CDS AEJR02000025.1 184393 183611 -1 - 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229931.peg.1990 CDS AEJR02000025.1 185380 184397 -1 - 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229931.peg.1991 CDS AEJR02000025.1 186009 185377 -3 - 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229931.peg.1992 CDS AEJR02000025.1 187054 186011 -1 - 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229931.peg.1993 CDS AEJR02000025.1 187531 187193 -1 - 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229931.peg.1994 CDS AEJR02000025.1 188365 187607 -1 - 759 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229931.peg.1995 CDS AEJR02000025.1 188642 189463 2 + 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229931.peg.1996 CDS AEJR02000025.1 189463 190710 1 + 1248 FIG00641944: hypothetical protein - none -
fig|6666666.229931.peg.1997 CDS AEJR02000025.1 190707 191339 3 + 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229931.peg.1998 CDS AEJR02000025.1 191342 192118 2 + 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229931.peg.1999 CDS AEJR02000025.1 192207 193559 3 + 1353 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229931.peg.2000 CDS AEJR02000025.1 193584 194924 3 + 1341 FIG00782214: hypothetical protein - none -
fig|6666666.229931.peg.2001 CDS AEJR02000025.1 194942 195634 2 + 693 Metal-dependent hydrolase - none -
fig|6666666.229931.peg.2002 CDS AEJR02000025.1 195682 197478 1 + 1797 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229931.peg.2003 CDS AEJR02000025.1 197674 198492 1 + 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229931.peg.2004 CDS AEJR02000025.1 201298 198698 -1 - 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229931.peg.2005 CDS AEJR02000025.1 202429 201383 -1 - 1047 hypothetical protein - none -
fig|6666666.229931.peg.2006 CDS AEJR02000025.1 203374 202616 -1 - 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229931.peg.2007 CDS AEJR02000025.1 204473 203376 -2 - 1098 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) - none -
fig|6666666.229931.peg.2008 CDS AEJR02000025.1 204872 204543 -2 - 330 Protein yifE - none -
fig|6666666.229931.peg.2009 CDS AEJR02000025.1 205549 204932 -1 - 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229931.peg.2010 CDS AEJR02000025.1 205834 205568 -1 - 267 Protein yihD - none -
fig|6666666.229931.peg.2011 CDS AEJR02000025.1 205918 206502 1 + 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229931.peg.2012 CDS AEJR02000025.1 206601 207131 3 + 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229931.peg.2013 CDS AEJR02000025.1 207243 208772 3 + 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229931.peg.2014 CDS AEJR02000025.1 208775 209716 2 + 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229931.peg.2015 CDS AEJR02000025.1 209721 211385 3 + 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229931.peg.2016 CDS AEJR02000025.1 211407 211685 3 + 279 hypothetical protein - none -
fig|6666666.229931.peg.2017 CDS AEJR02000025.1 211720 211851 1 + 132 hypothetical protein - none -
fig|6666666.229931.peg.2018 CDS AEJR02000025.1 212049 211903 -3 - 147 hypothetical protein - none -
fig|6666666.229931.peg.2019 CDS AEJR02000025.1 212402 212070 -2 - 333 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229931.peg.2020 CDS AEJR02000025.1 212417 212968 2 + 552 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229931.peg.2021 CDS AEJR02000025.1 213050 213388 2 + 339 hypothetical protein - none -
fig|6666666.229931.peg.2022 CDS AEJR02000025.1 213534 214238 3 + 705 hypothetical protein - none -
fig|6666666.229931.peg.2023 CDS AEJR02000025.1 214680 215090 3 + 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229931.peg.2024 CDS AEJR02000025.1 215092 215643 1 + 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229931.peg.2025 CDS AEJR02000025.1 215799 216227 3 + 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229931.peg.2026 CDS AEJR02000025.1 216232 216921 1 + 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229931.peg.2027 CDS AEJR02000025.1 216936 217112 3 + 177 hypothetical protein - none -
fig|6666666.229931.peg.2028 CDS AEJR02000025.1 217283 217774 2 + 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229931.peg.2029 CDS AEJR02000025.1 217826 218197 2 + 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229931.peg.2030 CDS AEJR02000025.1 218468 222496 2 + 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229931.peg.2031 CDS AEJR02000025.1 222601 226869 1 + 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229931.rna.1 RNA AEJR02000002.1 27282 27372 3 + 91 tRNA-Ser-GCT - none -
fig|6666666.229931.rna.2 RNA AEJR02000002.1 27393 27466 3 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.229931.rna.3 RNA AEJR02000002.1 27524 27597 2 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.229931.rna.4 RNA AEJR02000003.1 157 84 -1 - 74 tRNA-Pro-TGG - none -
fig|6666666.229931.rna.5 RNA AEJR02000003.1 235 163 -1 - 73 tRNA-His-GTG - none -
fig|6666666.229931.rna.6 RNA AEJR02000003.1 343 270 -1 - 74 tRNA-Arg-CCG tRNAs
fig|6666666.229931.rna.7 RNA AEJR02000003.1 50144 50216 2 + 73 tRNA-Asn-GTT - none -
fig|6666666.229931.rna.8 RNA AEJR02000003.1 126157 126239 1 + 83 tRNA-Leu-CAA tRNAs
fig|6666666.229931.rna.9 RNA AEJR02000003.1 263508 263581 3 + 74 tRNA-Asp-GTC - none -
fig|6666666.229931.rna.10 RNA AEJR02000003.1 263607 263680 3 + 74 tRNA-Asp-GTC - none -
fig|6666666.229931.rna.11 RNA AEJR02000003.1 305690 305617 -2 - 74 tRNA-Lys-CTT - none -
fig|6666666.229931.rna.12 RNA AEJR02000003.1 305791 305719 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.229931.rna.13 RNA AEJR02000003.1 305893 305821 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.229931.rna.14 RNA AEJR02000003.1 359297 359211 -2 - 87 tRNA-Ser-TGA - none -
fig|6666666.229931.rna.15 RNA AEJR02000003.1 366652 366724 1 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229931.rna.16 RNA AEJR02000003.1 366736 366806 1 + 71 tRNA-Cys-GCA tRNAs
fig|6666666.229931.rna.17 RNA AEJR02000004.1 81984 81912 -3 - 73 tRNA-Asn-GTT - none -
fig|6666666.229931.rna.18 RNA AEJR02000004.1 82064 81992 -2 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.229931.rna.19 RNA AEJR02000005.1 79740 79830 3 + 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229931.rna.20 RNA AEJR02000008.1 116 1 -2 - 116 5S RNA - none -
fig|6666666.229931.rna.21 RNA AEJR02000008.1 3413 371 -2 - 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229931.rna.22 RNA AEJR02000010.1 35633 35706 2 + 74 tRNA-Met-CAT - none -
fig|6666666.229931.rna.23 RNA AEJR02000010.1 64609 64681 1 + 73 tRNA-Thr-TGT - none -
fig|6666666.229931.rna.24 RNA AEJR02000010.1 64715 64796 2 + 82 tRNA-Tyr-GTA - none -
fig|6666666.229931.rna.25 RNA AEJR02000010.1 64840 64911 1 + 72 tRNA-Gly-TCC - none -
fig|6666666.229931.rna.26 RNA AEJR02000010.1 64918 64990 1 + 73 tRNA-Thr-GGT - none -
fig|6666666.229931.rna.27 RNA AEJR02000011.1 62273 62359 2 + 87 tRNA-Ser-GGA tRNAs
fig|6666666.229931.rna.28 RNA AEJR02000011.1 80977 80905 -1 - 73 tRNA-Trp-CCA tRNAs
fig|6666666.229931.rna.29 RNA AEJR02000011.1 81088 81015 -1 - 74 tRNA-Asp-GTC - none -
fig|6666666.229931.rna.30 RNA AEJR02000011.1 81214 81095 -1 - 120 5S RNA - none -
fig|6666666.229931.rna.31 RNA AEJR02000013.1 161 1700 2 + 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229931.rna.32 RNA AEJR02000014.1 2035 1962 -1 - 74 tRNA-Arg-TCT - none -
fig|6666666.229931.rna.33 RNA AEJR02000014.1 2145 2072 -3 - 74 tRNA-Pro-TGG - none -
fig|6666666.229931.rna.34 RNA AEJR02000017.1 58503 58576 3 + 74 tRNA-Met-CAT - none -
fig|6666666.229931.rna.35 RNA AEJR02000018.1 22202 22130 -2 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229931.rna.36 RNA AEJR02000019.1 141249 141176 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229931.rna.37 RNA AEJR02000019.1 163051 162980 -1 - 72 tRNA-Gln-TTG - none -
fig|6666666.229931.rna.38 RNA AEJR02000019.1 163163 163092 -2 - 72 tRNA-Gln-TTG - none -
fig|6666666.229931.rna.39 RNA AEJR02000019.1 163277 163196 -2 - 82 tRNA-Leu-TAG - none -
fig|6666666.229931.rna.40 RNA AEJR02000019.1 163359 163286 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229931.rna.41 RNA AEJR02000021.1 21786 21859 3 + 74 tRNA-Val-GAC tRNAs
fig|6666666.229931.rna.42 RNA AEJR02000024.1 36389 36471 2 + 83 tRNA-Leu-GAG tRNAs
fig|6666666.229931.rna.43 RNA AEJR02000024.1 66132 66215 3 + 84 tRNA-Leu-CAG tRNAs
fig|6666666.229931.rna.44 RNA AEJR02000024.1 122707 122635 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.229931.rna.45 RNA AEJR02000024.1 122846 122763 -2 - 84 tRNA-Leu-TAA - none -
fig|6666666.229931.rna.46 RNA AEJR02000024.1 122923 122851 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229931.rna.47 RNA AEJR02000025.1 127231 127159 -1 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.229931.rna.48 RNA AEJR02000025.1 129041 129113 2 + 73 tRNA-Val-TAC - none -
fig|6666666.229931.rna.49 RNA AEJR02000026.1 80 153 2 + 74 tRNA-Ile-GAT - none -
fig|6666666.229931.rna.50 RNA AEJR02000026.1 206 278 2 + 73 tRNA-Ala-TGC - none -