fig|6666666.229932.peg.1 CDS AEJN02000001.1 277 906 1 + 630 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - none -
fig|6666666.229932.peg.2 CDS AEJN02000001.1 2449 2183 -1 - 267 hypothetical protein - none -
fig|6666666.229932.peg.3 CDS AEJN02000001.1 2928 2602 -3 - 327 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229932.peg.4 CDS AEJN02000001.1 3168 3569 3 + 402 LysR family regulatory protein CidR Murein hydrolase regulation and cell death
fig|6666666.229932.peg.5 CDS AEJN02000001.1 3715 3578 -1 - 138 hypothetical protein - none -
fig|6666666.229932.peg.6 CDS AEJN02000001.1 4010 3774 -2 - 237 hypothetical protein - none -
fig|6666666.229932.peg.7 CDS AEJN02000001.1 5738 4074 -2 - 1665 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229932.peg.8 CDS AEJN02000001.1 6684 5743 -3 - 942 1-phosphofructokinase (EC 2.7.1.56) Fructose utilization
fig|6666666.229932.peg.9 CDS AEJN02000001.1 8216 6687 -2 - 1530 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) Fructose utilization;
Fructose utilization
fig|6666666.229932.peg.10 CDS AEJN02000001.1 8858 8328 -2 - 531 ATPases involved in chromosome partitioning - none -
fig|6666666.229932.peg.11 CDS AEJN02000001.1 9541 8957 -1 - 585 Molybdopterin-guanine dinucleotide biosynthesis protein MobA Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229932.peg.12 CDS AEJN02000001.1 9625 9891 1 + 267 Protein yihD - none -
fig|6666666.229932.peg.13 CDS AEJN02000001.1 9910 10527 1 + 618 Periplasmic thiol:disulfide interchange protein DsbA Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229932.peg.14 CDS AEJN02000001.1 10587 10916 3 + 330 Protein yifE - none -
fig|6666666.229932.peg.15 CDS AEJN02000001.1 10986 12083 3 + 1098 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) - none -
fig|6666666.229932.peg.16 CDS AEJN02000001.1 12085 12843 1 + 759 rRNA small subunit methyltransferase J - none -
fig|6666666.229932.peg.17 CDS AEJN02000001.1 12935 14647 2 + 1713 hypothetical protein - none -
fig|6666666.229932.peg.18 CDS AEJN02000001.1 14703 15179 3 + 477 hypothetical protein - none -
fig|6666666.229932.peg.19 CDS AEJN02000001.1 15176 15907 2 + 732 hypothetical protein - none -
fig|6666666.229932.peg.20 CDS AEJN02000003.1 2018 675 -2 - 1344 putative hexose phosphate transport protein - none -
fig|6666666.229932.peg.21 CDS AEJN02000003.1 2839 2036 -1 - 804 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229932.peg.22 CDS AEJN02000003.1 3103 3933 1 + 831 5-deoxy-glucuronate isomerase (EC 5.3.1.-) Inositol catabolism
fig|6666666.229932.peg.23 CDS AEJN02000003.1 4819 4700 -1 - 120 hypothetical protein - none -
fig|6666666.229932.peg.24 CDS AEJN02000004.1 402 968 3 + 567 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229932.peg.25 CDS AEJN02000004.1 1730 1158 -2 - 573 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229932.peg.26 CDS AEJN02000004.1 1814 4645 2 + 2832 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229932.peg.27 CDS AEJN02000004.1 5217 4714 -3 - 504 Mercuric resistance operon regulatory protein - none -
fig|6666666.229932.peg.28 CDS AEJN02000004.1 5556 5245 -3 - 312 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229932.peg.29 CDS AEJN02000004.1 5523 5651 3 + 129 hypothetical protein - none -
fig|6666666.229932.peg.30 CDS AEJN02000004.1 5702 5965 2 + 264 hypothetical protein - none -
fig|6666666.229932.peg.31 CDS AEJN02000004.1 6038 8356 2 + 2319 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229932.peg.32 CDS AEJN02000004.1 8811 9215 3 + 405 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229932.peg.33 CDS AEJN02000004.1 10739 9759 -2 - 981 DNA polymerase III delta subunit (EC 2.7.7.7) CBSS-208964.1.peg.3988
fig|6666666.229932.peg.34 CDS AEJN02000004.1 11242 10739 -1 - 504 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) CBSS-208964.1.peg.3988;
KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229932.peg.35 CDS AEJN02000004.1 11231 11359 2 + 129 hypothetical protein - none -
fig|6666666.229932.peg.36 CDS AEJN02000004.1 13972 11384 -1 - 2589 Leucyl-tRNA synthetase (EC 6.1.1.4) CBSS-208964.1.peg.3988;
tRNA aminoacylation, Leu
fig|6666666.229932.peg.37 CDS AEJN02000004.1 14120 13950 -2 - 171 hypothetical protein - none -
fig|6666666.229932.peg.38 CDS AEJN02000004.1 14208 14092 -3 - 117 hypothetical protein - none -
fig|6666666.229932.peg.39 CDS AEJN02000004.1 14720 14163 -2 - 558 FIG00696423: hypothetical protein - none -
fig|6666666.229932.peg.40 CDS AEJN02000004.1 15041 14748 -2 - 294 nucleotidyltransferase - none -
fig|6666666.229932.peg.41 CDS AEJN02000004.1 15444 15025 -3 - 420 nucleotidyltransferase substrate binding protein, HI0074 family - none -
fig|6666666.229932.peg.42 CDS AEJN02000004.1 16362 15535 -3 - 828 Bis(5@1-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) - none -
fig|6666666.229932.peg.43 CDS AEJN02000004.1 17241 16378 -3 - 864 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229932.peg.44 CDS AEJN02000004.1 18251 17319 -2 - 933 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) Lipopolysaccharide assembly;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229932.peg.45 CDS AEJN02000004.1 18852 18316 -3 - 537 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR De Novo Pyrimidine Synthesis;
De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229932.peg.46 CDS AEJN02000004.1 19401 18991 -3 - 411 Copper metallochaperone, bacterial analog of Cox17 protein Biogenesis of cytochrome c oxidases
fig|6666666.229932.peg.47 CDS AEJN02000004.1 19514 20125 2 + 612 FIG002903: a protein of unknown function perhaps involved in purine metabolism CBSS-354.1.peg.876
fig|6666666.229932.peg.48 CDS AEJN02000004.1 20149 21516 1 + 1368 Adenylosuccinate lyase (EC 4.3.2.2) CBSS-354.1.peg.876;
Purine conversions
fig|6666666.229932.peg.49 CDS AEJN02000004.1 21485 21745 2 + 261 hypothetical protein - none -
fig|6666666.229932.peg.50 CDS AEJN02000004.1 21738 22487 3 + 750 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) - none -
fig|6666666.229932.peg.51 CDS AEJN02000004.1 22732 22601 -1 - 132 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229932.peg.52 CDS AEJN02000004.1 23008 22736 -1 - 273 Transcriptional regulator, MerR family Cobalt-zinc-cadmium resistance
fig|6666666.229932.peg.53 CDS AEJN02000004.1 23146 24270 1 + 1125 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229932.peg.54 CDS AEJN02000004.1 24285 25115 3 + 831 S-formylglutathione hydrolase (EC 3.1.2.12) Glutathione-dependent pathway of formaldehyde detoxification
fig|6666666.229932.peg.55 CDS AEJN02000004.1 25468 25602 1 + 135 hypothetical protein - none -
fig|6666666.229932.peg.56 CDS AEJN02000004.1 27134 25755 -2 - 1380 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229932.peg.57 CDS AEJN02000004.1 27288 28082 3 + 795 FIG001154: CcsA-related protein - none -
fig|6666666.229932.peg.58 CDS AEJN02000004.1 28157 29419 2 + 1263 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229932.peg.59 CDS AEJN02000004.1 29594 30064 2 + 471 Ferric siderophore transport system, biopolymer transport protein ExbB Ton and Tol transport systems
fig|6666666.229932.peg.60 CDS AEJN02000004.1 30068 30514 2 + 447 Biopolymer transport protein ExbD/TolR Ton and Tol transport systems
fig|6666666.229932.peg.61 CDS AEJN02000004.1 30524 31276 2 + 753 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229932.peg.62 CDS AEJN02000004.1 32137 31364 -1 - 774 Zn-dependent protease with chaperone function - none -
fig|6666666.229932.peg.63 CDS AEJN02000004.1 32741 32214 -2 - 528 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229932.peg.64 CDS AEJN02000004.1 32904 34148 3 + 1245 Tryptophan-specific transport protein - none -
fig|6666666.229932.peg.65 CDS AEJN02000004.1 34450 34683 1 + 234 hypothetical protein - none -
fig|6666666.229932.peg.66 CDS AEJN02000004.1 35879 35172 -2 - 708 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) NAD and NADP cofactor biosynthesis global
fig|6666666.229932.peg.67 CDS AEJN02000004.1 36094 36621 1 + 528 ATP-dependent protease HslV (EC 3.4.25.-) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229932.peg.68 CDS AEJN02000004.1 36642 37973 3 + 1332 ATP-dependent hsl protease ATP-binding subunit HslU Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229932.peg.69 CDS AEJN02000004.1 38039 39622 2 + 1584 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) Transport of Nickel and Cobalt
fig|6666666.229932.peg.70 CDS AEJN02000004.1 39688 40464 1 + 777 Nucleoside ABC transporter, periplasmic nucleoside-binding protein - none -
fig|6666666.229932.peg.71 CDS AEJN02000004.1 40482 40976 3 + 495 Protein yfbU - none -
fig|6666666.229932.peg.72 CDS AEJN02000004.1 41051 40938 -2 - 114 hypothetical protein - none -
fig|6666666.229932.peg.73 CDS AEJN02000005.1 1595 162 -2 - 1434 Putative GTP-binding protein YdgA - none -
fig|6666666.229932.peg.74 CDS AEJN02000005.1 1884 3785 3 + 1902 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229932.peg.75 CDS AEJN02000005.1 4220 5347 2 + 1128 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229932.peg.76 CDS AEJN02000005.1 5772 5425 -3 - 348 Programmed cell death toxin ChpB - none -
fig|6666666.229932.peg.77 CDS AEJN02000005.1 6023 5772 -2 - 252 hypothetical protein - none -
fig|6666666.229932.peg.78 CDS AEJN02000005.1 7220 6168 -2 - 1053 Outer membrane protein P2 precursor (OMP P2) - none -
fig|6666666.229932.peg.79 CDS AEJN02000005.1 8624 7434 -2 - 1191 Cystathionine beta-lyase (EC 4.4.1.8) Methionine Biosynthesis
fig|6666666.229932.peg.80 CDS AEJN02000005.1 8879 9436 2 + 558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.81 CDS AEJN02000005.1 9962 10093 2 + 132 Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like - none -
fig|6666666.229932.peg.82 CDS AEJN02000006.1 745 164 -1 - 582 Molybdopterin biosynthesis molybdochelatase MogA Molybdenum cofactor biosynthesis
fig|6666666.229932.peg.83 CDS AEJN02000006.1 1764 835 -3 - 930 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.84 CDS AEJN02000006.1 2396 1764 -2 - 633 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.85 CDS AEJN02000006.1 3015 2407 -3 - 609 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.86 CDS AEJN02000006.1 4894 3026 -1 - 1869 Putative transport protein - none -
fig|6666666.229932.peg.87 CDS AEJN02000006.1 5533 4934 -1 - 600 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229932.peg.88 CDS AEJN02000006.1 6710 5526 -2 - 1185 Lipid-A-disaccharide synthase (EC 2.4.1.182) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229932.peg.89 CDS AEJN02000006.1 7583 6795 -2 - 789 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229932.peg.90 CDS AEJN02000006.1 8014 7604 -1 - 411 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII;
Llipid A biosynthesis cluster
fig|6666666.229932.peg.91 CDS AEJN02000006.1 9173 8151 -2 - 1023 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229932.peg.92 CDS AEJN02000006.1 9748 9173 -1 - 576 Outer membrane chaperone Skp (OmpH) precursor @ Outer membrane protein H precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229932.peg.93 CDS AEJN02000006.1 12264 9853 -3 - 2412 Outer membrane protein assembly factor YaeT precursor Lipopolysaccharide assembly;
Llipid A biosynthesis cluster
fig|6666666.229932.peg.94 CDS AEJN02000006.1 13617 12283 -3 - 1335 Membrane-associated zinc metalloprotease - none -
fig|6666666.229932.peg.95 CDS AEJN02000006.1 14495 13626 -2 - 870 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.96 CDS AEJN02000006.1 15229 14510 -1 - 720 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229932.peg.97 CDS AEJN02000006.1 16534 15251 -1 - 1284 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229932.peg.98 CDS AEJN02000006.1 17120 16563 -2 - 558 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229932.peg.99 CDS AEJN02000006.1 17277 17134 -3 - 144 hypothetical protein - none -
fig|6666666.229932.peg.100 CDS AEJN02000006.1 18058 17345 -1 - 714 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229932.peg.101 CDS AEJN02000006.1 18116 18247 2 + 132 hypothetical protein - none -
fig|6666666.229932.peg.102 CDS AEJN02000006.1 19873 18215 -1 - 1659 Mediator of hyperadherence YidE - none -
fig|6666666.229932.peg.103 CDS AEJN02000006.1 19997 21814 2 + 1818 ABC transporter ATP-binding protein - none -
fig|6666666.229932.peg.104 CDS AEJN02000006.1 25153 22697 -1 - 2457 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229932.peg.105 CDS AEJN02000006.1 26243 25488 -2 - 756 Glycerol-3-phosphate regulon repressor GlpR - none -
fig|6666666.229932.peg.106 CDS AEJN02000006.1 27180 26305 -3 - 876 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229932.peg.107 CDS AEJN02000006.1 27224 27538 2 + 315 Uncharacterized protein PM1437 - none -
fig|6666666.229932.peg.108 CDS AEJN02000006.1 27876 27550 -3 - 327 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) Single-Rhodanese-domain proteins
fig|6666666.229932.peg.109 CDS AEJN02000006.1 28541 27888 -2 - 654 FIG00903983: hypothetical protein - none -
fig|6666666.229932.peg.110 CDS AEJN02000006.1 30316 28562 -1 - 1755 DNA recombination protein RmuC DNA repair, bacterial
fig|6666666.229932.peg.111 CDS AEJN02000006.1 30319 30858 1 + 540 Similar to C-terminal Zn-finger domain of DNA topoisomerase I Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229932.peg.112 CDS AEJN02000006.1 30863 31414 2 + 552 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229932.peg.113 CDS AEJN02000006.1 31418 32218 2 + 801 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229932.peg.114 CDS AEJN02000006.1 33094 32213 -1 - 882 Protein rarD - none -
fig|6666666.229932.peg.115 CDS AEJN02000006.1 33312 33127 -3 - 186 HTH-type transcriptional regulator IlvY Alanine biosynthesis;
LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium
fig|6666666.229932.peg.116 CDS AEJN02000006.1 33944 34243 2 + 300 Ketol-acid reductoisomerase (EC 1.1.1.86) Coenzyme A Biosynthesis
fig|6666666.229932.peg.117 CDS AEJN02000006.1 34407 34523 3 + 117 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229932.peg.118 CDS AEJN02000006.1 34702 34839 1 + 138 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229932.peg.119 CDS AEJN02000006.1 34992 35462 3 + 471 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229932.peg.120 CDS AEJN02000006.1 35577 37679 3 + 2103 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229932.peg.121 CDS AEJN02000007.1 1167 3767 3 + 2601 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229932.peg.122 CDS AEJN02000007.1 4789 3971 -1 - 819 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229932.peg.123 CDS AEJN02000007.1 6640 4985 -1 - 1656 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229932.peg.124 CDS AEJN02000007.1 6729 6857 3 + 129 hypothetical protein - none -
fig|6666666.229932.peg.125 CDS AEJN02000007.1 7521 6829 -3 - 693 Metal-dependent hydrolase - none -
fig|6666666.229932.peg.126 CDS AEJN02000007.1 8879 7539 -2 - 1341 FIG00782214: hypothetical protein - none -
fig|6666666.229932.peg.127 CDS AEJN02000007.1 10256 8904 -2 - 1353 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229932.peg.128 CDS AEJN02000007.1 11121 10345 -3 - 777 Hydroxypyruvate isomerase (EC 5.3.1.22) Glycerate metabolism
fig|6666666.229932.peg.129 CDS AEJN02000007.1 11756 11124 -2 - 633 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - none -
fig|6666666.229932.peg.130 CDS AEJN02000007.1 12997 11753 -1 - 1245 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) - none -
fig|6666666.229932.peg.131 CDS AEJN02000007.1 13821 13000 -3 - 822 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Polyhydroxybutyrate metabolism
fig|6666666.229932.peg.132 CDS AEJN02000007.1 14098 14856 1 + 759 Transcriptional regulators of sugar metabolism - none -
fig|6666666.229932.peg.133 CDS AEJN02000007.1 14932 15270 1 + 339 Nitrogen regulatory protein P-II Ammonia assimilation
fig|6666666.229932.peg.134 CDS AEJN02000007.1 15409 16452 1 + 1044 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229932.peg.135 CDS AEJN02000007.1 16454 17086 2 + 633 Thymidylate kinase (EC 2.7.4.9) pyrimidine conversions
fig|6666666.229932.peg.136 CDS AEJN02000007.1 17083 18066 1 + 984 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229932.peg.137 CDS AEJN02000007.1 18070 18852 1 + 783 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229932.peg.138 CDS AEJN02000007.1 18884 19408 2 + 525 FIG00696143: hypothetical protein - none -
fig|6666666.229932.peg.139 CDS AEJN02000007.1 19545 19405 -3 - 141 hypothetical protein - none -
fig|6666666.229932.peg.140 CDS AEJN02000007.1 19499 20815 2 + 1317 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229932.peg.141 CDS AEJN02000008.1 664 416 -1 - 249 hypothetical protein - none -
fig|6666666.229932.peg.142 CDS AEJN02000008.1 955 743 -1 - 213 hypothetical protein - none -
fig|6666666.229932.peg.143 CDS AEJN02000008.1 1088 2233 2 + 1146 FIG00698503: hypothetical protein - none -
fig|6666666.229932.peg.144 CDS AEJN02000008.1 2254 2583 1 + 330 putative single stranded DNA-binding protien - none -
fig|6666666.229932.peg.145 CDS AEJN02000008.1 3061 3282 1 + 222 hypothetical protein - none -
fig|6666666.229932.peg.146 CDS AEJN02000008.1 3392 4561 2 + 1170 hypothetical protein - none -
fig|6666666.229932.peg.147 CDS AEJN02000008.1 4569 4874 3 + 306 putative phage-related membrane protein - none -
fig|6666666.229932.peg.148 CDS AEJN02000008.1 4882 6012 1 + 1131 putative phage-related secreted protein - none -
fig|6666666.229932.peg.149 CDS AEJN02000008.1 5990 7144 2 + 1155 FIG00698722: hypothetical protein - none -
fig|6666666.229932.peg.150 CDS AEJN02000009.1 879 184 -3 - 696 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229932.peg.151 CDS AEJN02000009.1 1542 895 -3 - 648 Glutaredoxin 2 Glutaredoxins;
Glutathione: Redox cycle
fig|6666666.229932.peg.152 CDS AEJN02000009.1 3134 1659 -2 - 1476 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229932.peg.153 CDS AEJN02000009.1 3274 4794 1 + 1521 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter - none -
fig|6666666.229932.peg.154 CDS AEJN02000009.1 4808 5773 2 + 966 tRNA (5-methoxyuridine) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229932.peg.155 CDS AEJN02000009.1 5861 7159 2 + 1299 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229932.peg.156 CDS AEJN02000009.1 7514 7224 -2 - 291 hypothetical protein - none -
fig|6666666.229932.peg.157 CDS AEJN02000009.1 8520 7537 -3 - 984 DnaJ-class molecular chaperone CbpA Protein chaperones
fig|6666666.229932.peg.158 CDS AEJN02000009.1 8808 10340 3 + 1533 GTP-binding protein EngA CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415;
Universal GTPases
fig|6666666.229932.peg.159 CDS AEJN02000009.1 11606 10410 -2 - 1197 Sugar efflux transporter SotB - none -
fig|6666666.229932.peg.160 CDS AEJN02000009.1 12810 11608 -3 - 1203 FIG00696476: hypothetical protein - none -
fig|6666666.229932.peg.161 CDS AEJN02000009.1 13395 12811 -3 - 585 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) pyrimidine conversions
fig|6666666.229932.peg.162 CDS AEJN02000009.1 14055 13405 -3 - 651 Uridine kinase (EC 2.7.1.48) [C1] pyrimidine conversions
fig|6666666.229932.peg.163 CDS AEJN02000009.1 14364 15404 3 + 1041 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229932.peg.164 CDS AEJN02000009.1 15566 16609 2 + 1044 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229932.peg.165 CDS AEJN02000009.1 16637 18694 2 + 2058 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229932.peg.166 CDS AEJN02000009.1 18710 19756 2 + 1047 Fe(3+) ions import ATP-binding protein fbpC (EC 3.6.3.30) - none -
fig|6666666.229932.peg.167 CDS AEJN02000009.1 20035 22155 1 + 2121 unknown - none -
fig|6666666.229932.peg.168 CDS AEJN02000009.1 23966 23394 -2 - 573 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) Proline Synthesis
fig|6666666.229932.peg.169 CDS AEJN02000009.1 24755 24096 -2 - 660 putative membrane protein - none -
fig|6666666.229932.peg.170 CDS AEJN02000009.1 24952 24836 -1 - 117 hypothetical protein - none -
fig|6666666.229932.peg.171 CDS AEJN02000009.1 24967 25773 1 + 807 Permeases of the drug/metabolite transporter (DMT) superfamily - none -
fig|6666666.229932.peg.172 CDS AEJN02000009.1 27043 26036 -1 - 1008 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) Cluster Ytf and putative sugar transporter;
Glycolysis and Gluconeogenesis;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229932.peg.173 CDS AEJN02000009.1 27201 28574 3 + 1374 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) Peptidoglycan biosynthesis--gjo;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229932.peg.174 CDS AEJN02000009.1 28882 28757 -1 - 126 hypothetical protein - none -
fig|6666666.229932.peg.175 CDS AEJN02000009.1 28952 30070 2 + 1119 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229932.peg.176 CDS AEJN02000009.1 30070 30840 1 + 771 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway - none -
fig|6666666.229932.peg.177 CDS AEJN02000009.1 30940 31959 1 + 1020 Zinc ABC transporter, periplasmic-binding protein ZnuA - none -
fig|6666666.229932.peg.178 CDS AEJN02000009.1 32087 32899 2 + 813 Outer membrane lipoprotein e (P4) / NMN 5@1-nucleotidase, extracellular (EC 3.1.3.5) NAD and NADP cofactor biosynthesis global
fig|6666666.229932.peg.179 CDS AEJN02000009.1 33854 33438 -2 - 417 conserved hypothetical protein; possible membrane protein - none -
fig|6666666.229932.peg.180 CDS AEJN02000009.1 33927 34355 3 + 429 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - none -
fig|6666666.229932.peg.181 CDS AEJN02000009.1 34348 34641 1 + 294 UPF0125 protein yfjF - none -
fig|6666666.229932.peg.182 CDS AEJN02000009.1 34674 35867 3 + 1194 FIG074102: hypothetical protein - none -
fig|6666666.229932.peg.183 CDS AEJN02000009.1 35874 37208 3 + 1335 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229932.peg.184 CDS AEJN02000009.1 38068 37214 -1 - 855 FIG000506: Predicted P-loop-containing kinase - none -
fig|6666666.229932.peg.185 CDS AEJN02000009.1 38629 38096 -1 - 534 PTS IIA-like nitrogen-regulatory protein PtsN - none -
fig|6666666.229932.peg.186 CDS AEJN02000009.1 39358 38633 -1 - 726 Lipopolysaccharide ABC transporter, ATP-binding protein LptB KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229932.peg.187 CDS AEJN02000009.1 39882 39364 -3 - 519 LptA, protein essential for LPS transport across the periplasm KDO2-Lipid A biosynthesis;
Lipopolysaccharide assembly
fig|6666666.229932.peg.188 CDS AEJN02000009.1 40438 39863 -1 - 576 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters Lipopolysaccharide assembly
fig|6666666.229932.peg.189 CDS AEJN02000009.1 40551 40435 -3 - 117 hypothetical protein - none -
fig|6666666.229932.peg.190 CDS AEJN02000009.1 40721 41518 2 + 798 Uncharacterized ABC transporter, ATP-binding protein YrbF CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229932.peg.191 CDS AEJN02000009.1 41512 42297 1 + 786 Uncharacterized ABC transporter, permease component YrbE CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229932.peg.192 CDS AEJN02000009.1 42320 42829 2 + 510 Uncharacterized ABC transporter, periplasmic component YrbD CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229932.peg.193 CDS AEJN02000009.1 42858 43499 3 + 642 Uncharacterized ABC transporter, auxiliary component YrbC CBSS-12149.1.peg.3301;
Lipopolysaccharide assembly
fig|6666666.229932.peg.194 CDS AEJN02000009.1 43593 43862 3 + 270 Uncharacterized protein YrbB CBSS-12149.1.peg.3301
fig|6666666.229932.peg.195 CDS AEJN02000009.1 43862 44119 2 + 258 YrbA protein Broadly distributed proteins not in subsystems;
CBSS-12149.1.peg.3301
fig|6666666.229932.peg.196 CDS AEJN02000009.1 44136 45413 3 + 1278 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) CBSS-12149.1.peg.3301;
Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229932.peg.197 CDS AEJN02000009.1 45765 45475 -3 - 291 FIG00696346: hypothetical protein - none -
fig|6666666.229932.peg.198 CDS AEJN02000009.1 45968 47398 2 + 1431 Long-chain fatty acid transport protein - none -
fig|6666666.229932.peg.199 CDS AEJN02000009.1 47475 48014 3 + 540 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229932.peg.200 CDS AEJN02000009.1 48011 48679 2 + 669 DNA mismatch repair endonuclease MutH DNA repair, bacterial
fig|6666666.229932.peg.201 CDS AEJN02000009.1 48744 49469 3 + 726 Integral membrane protein TerC - none -
fig|6666666.229932.peg.202 CDS AEJN02000009.1 50987 49578 -2 - 1410 Glutamine synthetase type I (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases;
Peptidoglycan Biosynthesis
fig|6666666.229932.peg.203 CDS AEJN02000009.1 51374 53227 2 + 1854 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229932.peg.204 CDS AEJN02000009.1 53337 53224 -3 - 114 hypothetical protein - none -
fig|6666666.229932.peg.205 CDS AEJN02000009.1 53453 55963 2 + 2511 TolA protein Ton and Tol transport systems
fig|6666666.229932.peg.206 CDS AEJN02000009.1 56491 56027 -1 - 465 Thiol peroxidase, Bcp-type (EC 1.11.1.15) CBSS-316057.3.peg.3521;
Thioredoxin-disulfide reductase
fig|6666666.229932.peg.207 CDS AEJN02000009.1 56649 57542 3 + 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229932.peg.208 CDS AEJN02000009.1 57655 58659 1 + 1005 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor Lipopolysaccharide assembly
fig|6666666.229932.peg.209 CDS AEJN02000009.1 58794 60305 3 + 1512 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229932.peg.210 CDS AEJN02000009.1 60620 61456 2 + 837 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) Choline and Betaine Uptake and Betaine Biosynthesis
fig|6666666.229932.peg.211 CDS AEJN02000009.1 62204 61509 -2 - 696 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360
fig|6666666.229932.peg.212 CDS AEJN02000009.1 63585 62197 -3 - 1389 Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) NAD and NADP cofactor biosynthesis global
fig|6666666.229932.peg.213 CDS AEJN02000009.1 63724 63855 1 + 132 hypothetical protein - none -
fig|6666666.229932.peg.214 CDS AEJN02000009.1 63944 66391 2 + 2448 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) CBSS-216591.1.peg.168;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229932.peg.215 CDS AEJN02000009.1 66404 67348 2 + 945 Homoserine kinase (EC 2.7.1.39) CBSS-269482.1.peg.1294;
Methionine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229932.peg.216 CDS AEJN02000009.1 67376 67816 2 + 441 hypothetical protein - none -
fig|6666666.229932.peg.217 CDS AEJN02000009.1 67872 69146 3 + 1275 Threonine synthase (EC 4.2.3.1) Threonine and Homoserine Biosynthesis
fig|6666666.229932.peg.218 CDS AEJN02000009.1 69205 69924 1 + 720 4@1-phosphopantetheinyl transferase (EC 2.7.8.-) Fatty Acid Biosynthesis FASII
fig|6666666.229932.peg.219 CDS AEJN02000009.1 70020 71273 3 + 1254 HflK protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229932.peg.220 CDS AEJN02000009.1 71273 72160 2 + 888 HflC protein Hfl operon;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229932.peg.221 CDS AEJN02000009.1 73635 72337 -3 - 1299 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229932.peg.222 CDS AEJN02000009.1 74692 73799 -1 - 894 Tyrosine recombinase XerD - none -
fig|6666666.229932.peg.223 CDS AEJN02000009.1 75135 74695 -3 - 441 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) A Hypothetical Protein Related to Proline Metabolism;
CBSS-630.2.peg.3360;
Proline Synthesis
fig|6666666.229932.peg.224 CDS AEJN02000009.1 75198 76103 3 + 906 DNA recombination-dependent growth factor C DNA repair, bacterial
fig|6666666.229932.peg.225 CDS AEJN02000009.1 76517 76194 -2 - 324 opacity associated protein - none -
fig|6666666.229932.peg.226 CDS AEJN02000009.1 77943 76630 -3 - 1314 Cell envelope opacity-associated protein A - none -
fig|6666666.229932.peg.227 CDS AEJN02000009.1 79133 78114 -2 - 1020 Lysine 2,3-aminomutase (EC 5.4.3.2) - none -
fig|6666666.229932.peg.228 CDS AEJN02000009.1 79212 79733 3 + 522 Translation elongation factor P Translation elongation factor P lysylation;
Translation elongation factors bacterial
fig|6666666.229932.peg.229 CDS AEJN02000011.1 100 366 1 + 267 Transcriptional regulator, AsnC family - none -
fig|6666666.229932.peg.230 CDS AEJN02000011.1 1645 464 -1 - 1182 Acetyl-CoA acetyltransferase (EC 2.3.1.9) Butanol Biosynthesis;
Isoprenoid Biosynthesis;
Polyhydroxybutyrate metabolism;
Serine-glyoxylate cycle
fig|6666666.229932.peg.231 CDS AEJN02000011.1 3006 1663 -3 - 1344 Short chain fatty acids transporter Polyhydroxybutyrate metabolism
fig|6666666.229932.peg.232 CDS AEJN02000011.1 3674 3009 -2 - 666 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) - none -
fig|6666666.229932.peg.233 CDS AEJN02000011.1 4276 3686 -1 - 591 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) - none -
fig|6666666.229932.peg.234 CDS AEJN02000011.1 4613 5509 2 + 897 Transcriptional regulators, LysR family - none -
fig|6666666.229932.peg.235 CDS AEJN02000011.1 5759 6070 2 + 312 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229932.peg.236 CDS AEJN02000011.1 6087 6713 3 + 627 LSU ribosomal protein L3p (L3e) - none -
fig|6666666.229932.peg.237 CDS AEJN02000011.1 6729 7331 3 + 603 LSU ribosomal protein L4p (L1e) - none -
fig|6666666.229932.peg.238 CDS AEJN02000011.1 7328 7630 2 + 303 LSU ribosomal protein L23p (L23Ae) - none -
fig|6666666.229932.peg.239 CDS AEJN02000011.1 7651 8472 1 + 822 LSU ribosomal protein L2p (L8e) - none -
fig|6666666.229932.peg.240 CDS AEJN02000011.1 8497 8772 1 + 276 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229932.peg.241 CDS AEJN02000011.1 8783 9115 2 + 333 LSU ribosomal protein L22p (L17e) - none -
fig|6666666.229932.peg.242 CDS AEJN02000011.1 9132 9839 3 + 708 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229932.peg.243 CDS AEJN02000011.1 9853 10263 1 + 411 LSU ribosomal protein L16p (L10e) - none -
fig|6666666.229932.peg.244 CDS AEJN02000011.1 10263 10454 3 + 192 LSU ribosomal protein L29p (L35e) - none -
fig|6666666.229932.peg.245 CDS AEJN02000011.1 10454 10711 2 + 258 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229932.peg.246 CDS AEJN02000011.1 11097 11240 3 + 144 Mobile element protein - none -
fig|6666666.229932.peg.247 CDS AEJN02000013.1 61 198 1 + 138 hypothetical protein - none -
fig|6666666.229932.peg.248 CDS AEJN02000013.1 472 278 -1 - 195 hypothetical protein - none -
fig|6666666.229932.peg.249 CDS AEJN02000013.1 2506 1346 -1 - 1161 hypothetical protein - none -
fig|6666666.229932.peg.250 CDS AEJN02000013.1 2726 2848 2 + 123 hypothetical protein - none -
fig|6666666.229932.peg.251 CDS AEJN02000013.1 3417 4274 3 + 858 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle;
Serine-glyoxylate cycle
fig|6666666.229932.peg.252 CDS AEJN02000013.1 5997 4363 -3 - 1635 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229932.peg.253 CDS AEJN02000013.1 6407 6117 -2 - 291 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229932.peg.254 CDS AEJN02000013.1 6976 6494 -1 - 483 FxsA protein - none -
fig|6666666.229932.peg.255 CDS AEJN02000013.1 7206 8624 3 + 1419 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229932.peg.256 CDS AEJN02000013.1 8805 9842 3 + 1038 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229932.peg.257 CDS AEJN02000013.1 11347 10511 -1 - 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229932.peg.258 CDS AEJN02000013.1 12166 11363 -1 - 804 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229932.peg.259 CDS AEJN02000013.1 13176 12178 -3 - 999 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229932.peg.260 CDS AEJN02000013.1 13401 13288 -3 - 114 hypothetical protein - none -
fig|6666666.229932.peg.261 CDS AEJN02000013.1 13461 14918 3 + 1458 Permeases of the major facilitator superfamily - none -
fig|6666666.229932.peg.262 CDS AEJN02000013.1 16117 14945 -1 - 1173 Xylose activator XylR (AraC family) Xylose utilization
fig|6666666.229932.peg.263 CDS AEJN02000013.1 16106 16228 2 + 123 hypothetical protein - none -
fig|6666666.229932.peg.264 CDS AEJN02000013.1 17578 16232 -1 - 1347 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229932.peg.265 CDS AEJN02000013.1 18461 17631 -2 - 831 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229932.peg.266 CDS AEJN02000013.1 20035 18908 -1 - 1128 Xylose ABC transporter, permease protein XylH Xylose utilization
fig|6666666.229932.peg.267 CDS AEJN02000013.1 21550 20093 -1 - 1458 D-xylose transport ATP-binding protein XylG Xylose utilization
fig|6666666.229932.peg.268 CDS AEJN02000013.1 22608 21610 -3 - 999 Xylose ABC transporter, periplasmic xylose-binding protein XylF Xylose utilization
fig|6666666.229932.peg.269 CDS AEJN02000013.1 22866 24185 3 + 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229932.peg.270 CDS AEJN02000013.1 24235 25707 1 + 1473 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229932.peg.271 CDS AEJN02000013.1 26296 26577 1 + 282 VgrG-3 protein - none -
fig|6666666.229932.peg.272 CDS AEJN02000013.1 27165 27800 3 + 636 DNA transformation protein TfoX CBSS-83333.1.peg.946;
Orphan regulatory proteins
fig|6666666.229932.peg.273 CDS AEJN02000013.1 28715 27867 -2 - 849 RNA polymerase sigma factor RpoH Heat shock dnaK gene cluster extended;
Transcription initiation, bacterial sigma factors
fig|6666666.229932.peg.274 CDS AEJN02000013.1 29214 28900 -3 - 315 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229932.peg.275 CDS AEJN02000013.1 30255 29230 -3 - 1026 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) Peptidoglycan Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229932.peg.276 CDS AEJN02000013.1 31973 30270 -2 - 1704 Nitrate/nitrite sensor protein (EC 2.7.3.-) - none -
fig|6666666.229932.peg.277 CDS AEJN02000013.1 32019 32183 3 + 165 hypothetical protein - none -
fig|6666666.229932.peg.278 CDS AEJN02000013.1 32249 32533 2 + 285 Periplasmic nitrate reductase component NapD - none -
fig|6666666.229932.peg.279 CDS AEJN02000013.1 32567 35053 2 + 2487 Periplasmic nitrate reductase precursor (EC 1.7.99.4) - none -
fig|6666666.229932.peg.280 CDS AEJN02000013.1 35101 35940 1 + 840 Ferredoxin-type protein NapG (periplasmic nitrate reductase) - none -
fig|6666666.229932.peg.281 CDS AEJN02000013.1 35940 36821 3 + 882 Polyferredoxin NapH (periplasmic nitrate reductase) - none -
fig|6666666.229932.peg.282 CDS AEJN02000013.1 36859 37308 1 + 450 Nitrate reductase cytochrome c550-type subunit - none -
fig|6666666.229932.peg.283 CDS AEJN02000013.1 37322 37957 2 + 636 Cytochrome c-type protein NapC - none -
fig|6666666.229932.peg.284 CDS AEJN02000013.1 39939 38032 -3 - 1908 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) Glutathionylspermidine and Trypanothione;
Glutathionylspermidine and Trypanothione
fig|6666666.229932.peg.285 CDS AEJN02000013.1 41100 40057 -3 - 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229932.peg.286 CDS AEJN02000013.1 41572 41120 -1 - 453 Fic family protein - none -
fig|6666666.229932.peg.287 CDS AEJN02000013.1 42247 41723 -1 - 525 Fic family protein - none -
fig|6666666.229932.peg.288 CDS AEJN02000013.1 43344 42418 -3 - 927 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) LOS core oligosaccharide biosynthesis
fig|6666666.229932.peg.289 CDS AEJN02000013.1 43373 43486 2 + 114 hypothetical protein - none -
fig|6666666.229932.peg.290 CDS AEJN02000013.1 43624 44400 1 + 777 Protein HI0205 precursor - none -
fig|6666666.229932.peg.291 CDS AEJN02000013.1 44427 46241 3 + 1815 5@1-nucleotidase (EC 3.1.3.5); NAD pyrophosphatase, periplasmic (EC 3.6.1.22) Purine conversions;
pyrimidine conversions
fig|6666666.229932.peg.292 CDS AEJN02000014.1 159 1043 3 + 885 hypothetical protein - none -
fig|6666666.229932.peg.293 CDS AEJN02000014.1 3013 1364 -1 - 1650 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229932.peg.294 CDS AEJN02000014.1 4111 3029 -1 - 1083 Alanine racemase (EC 5.1.1.1) ## biosynthetic Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229932.peg.295 CDS AEJN02000014.1 5541 4135 -3 - 1407 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229932.peg.296 CDS AEJN02000014.1 5556 5678 3 + 123 hypothetical protein - none -
fig|6666666.229932.peg.297 CDS AEJN02000014.1 6766 5687 -1 - 1080 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229932.peg.298 CDS AEJN02000014.1 8117 6867 -2 - 1251 Lipoprotein releasing system transmembrane protein LolE Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229932.peg.299 CDS AEJN02000014.1 8803 8117 -1 - 687 Lipoprotein releasing system ATP-binding protein LolD Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229932.peg.300 CDS AEJN02000014.1 10002 8818 -3 - 1185 Lipoprotein releasing system transmembrane protein LolC Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229932.peg.301 CDS AEJN02000015.1 3851 903 -2 - 2949 hypothetical protein - none -
fig|6666666.229932.peg.302 CDS AEJN02000015.1 4287 3889 -3 - 399 hypothetical protein - none -
fig|6666666.229932.peg.303 CDS AEJN02000016.1 5 385 2 + 381 hypothetical protein - none -
fig|6666666.229932.peg.304 CDS AEJN02000016.1 396 3302 3 + 2907 hypothetical protein - none -
fig|6666666.229932.peg.305 CDS AEJN02000016.1 3629 4495 2 + 867 hypothetical protein - none -
fig|6666666.229932.peg.306 CDS AEJN02000017.1 588 466 -3 - 123 hypothetical protein - none -
fig|6666666.229932.peg.307 CDS AEJN02000017.1 1564 734 -1 - 831 hypothetical protein - none -
fig|6666666.229932.peg.308 CDS AEJN02000017.1 4408 1604 -1 - 2805 hypothetical protein - none -
fig|6666666.229932.peg.309 CDS AEJN02000018.1 31 786 1 + 756 hypothetical protein - none -
fig|6666666.229932.peg.310 CDS AEJN02000018.1 761 1384 2 + 624 hypothetical protein - none -
fig|6666666.229932.peg.311 CDS AEJN02000018.1 1502 1356 -2 - 147 hypothetical protein - none -
fig|6666666.229932.peg.312 CDS AEJN02000018.1 1577 2779 2 + 1203 Carboxypeptidase - none -
fig|6666666.229932.peg.313 CDS AEJN02000018.1 2770 3480 1 + 711 hypothetical protein - none -
fig|6666666.229932.peg.314 CDS AEJN02000018.1 3741 3923 3 + 183 hypothetical protein - none -
fig|6666666.229932.peg.315 CDS AEJN02000018.1 4029 4607 3 + 579 hypothetical protein - none -
fig|6666666.229932.peg.316 CDS AEJN02000018.1 5174 5806 2 + 633 hypothetical protein - none -
fig|6666666.229932.peg.317 CDS AEJN02000018.1 7096 7236 1 + 141 hypothetical protein - none -
fig|6666666.229932.peg.318 CDS AEJN02000018.1 7388 7254 -2 - 135 Mobile element protein - none -
fig|6666666.229932.peg.319 CDS AEJN02000018.1 7701 7567 -3 - 135 hypothetical protein - none -
fig|6666666.229932.peg.320 CDS AEJN02000018.1 8004 8183 3 + 180 hypothetical protein - none -
fig|6666666.229932.peg.321 CDS AEJN02000018.1 10235 9012 -2 - 1224 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family Chitin and N-acetylglucosamine utilization
fig|6666666.229932.peg.322 CDS AEJN02000018.1 11601 10297 -3 - 1305 Glutamyl-tRNA reductase (EC 1.2.1.70) A Gammaproteobacteria Cluster Relating to Translation;
Heme and Siroheme Biosynthesis
fig|6666666.229932.peg.323 CDS AEJN02000018.1 12488 11787 -2 - 702 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229932.peg.324 CDS AEJN02000018.1 12509 13207 2 + 699 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Glutathione: Non-redox reactions
fig|6666666.229932.peg.325 CDS AEJN02000018.1 14758 13265 -1 - 1494 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229932.peg.326 CDS AEJN02000019.1 679 1101 1 + 423 F200 - none -
fig|6666666.229932.peg.327 CDS AEJN02000019.1 1365 1174 -3 - 192 hypothetical protein - none -
fig|6666666.229932.peg.328 CDS AEJN02000019.1 1874 2695 2 + 822 probable glucanotransferase (endo alpha-1,4 polygalactosaminidase related protein) - none -
fig|6666666.229932.peg.329 CDS AEJN02000019.1 3217 4143 1 + 927 Putative stomatin/prohibitin-family membrane protease subunit YbbK - none -
fig|6666666.229932.peg.330 CDS AEJN02000019.1 4167 4613 3 + 447 Putative activity regulator of membrane protease YbbK - none -
fig|6666666.229932.peg.331 CDS AEJN02000019.1 4622 5233 2 + 612 NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 Flavodoxin;
Flavodoxin
fig|6666666.229932.peg.332 CDS AEJN02000019.1 5233 5796 1 + 564 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229932.peg.333 CDS AEJN02000019.1 6789 5854 -3 - 936 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229932.peg.334 CDS AEJN02000019.1 6903 8333 3 + 1431 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase LOS core oligosaccharide biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229932.peg.335 CDS AEJN02000019.1 8755 8375 -1 - 381 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE - none -
fig|6666666.229932.peg.336 CDS AEJN02000019.1 9948 8752 -3 - 1197 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA Alanine biosynthesis;
mnm5U34 biosynthesis bacteria
fig|6666666.229932.peg.337 CDS AEJN02000019.1 10454 9954 -2 - 501 Micrococcal nuclease (thermonuclease) homologs - none -
fig|6666666.229932.peg.338 CDS AEJN02000019.1 11436 10471 -3 - 966 tRNA(Cytosine32)-2-thiocytidine synthetase CBSS-326442.4.peg.1852;
tRNA modification Bacteria
fig|6666666.229932.peg.339 CDS AEJN02000019.1 11577 11993 3 + 417 putative membrane protein - none -
fig|6666666.229932.peg.340 CDS AEJN02000019.1 14095 12083 -1 - 2013 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229932.peg.341 CDS AEJN02000019.1 14648 14097 -2 - 552 FIG00697418: hypothetical protein - none -
fig|6666666.229932.peg.342 CDS AEJN02000019.1 14805 15806 3 + 1002 ABC transporter, solute-binding protein - none -
fig|6666666.229932.peg.343 CDS AEJN02000019.1 15806 16819 2 + 1014 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229932.peg.344 CDS AEJN02000019.1 16816 17565 1 + 750 ABC transporter ATP-binding protein - none -
fig|6666666.229932.peg.345 CDS AEJN02000019.1 17660 20056 2 + 2397 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229932.peg.346 CDS AEJN02000019.1 20385 20176 -3 - 210 Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis
fig|6666666.229932.peg.347 CDS AEJN02000019.1 21502 20468 -1 - 1035 FIG00362752: hypothetical protein - none -
fig|6666666.229932.peg.348 CDS AEJN02000019.1 22309 21515 -1 - 795 Glutathione synthetase (EC 6.3.2.3) Cluster containing Glutathione synthetase;
Glutathione: Biosynthesis and gamma-glutamyl cycle;
Heat shock dnaK gene cluster extended
fig|6666666.229932.peg.349 CDS AEJN02000019.1 23316 22309 -3 - 1008 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229932.peg.350 CDS AEJN02000019.1 23738 23508 -2 - 231 hypothetical protein - none -
fig|6666666.229932.peg.351 CDS AEJN02000019.1 24112 24369 1 + 258 Phage tail fibers Phage tail fiber proteins
fig|6666666.229932.peg.352 CDS AEJN02000019.1 24369 24632 3 + 264 Phage tail fibers Phage tail fiber proteins
fig|6666666.229932.peg.353 CDS AEJN02000020.1 699 511 -3 - 189 VgrG-3 protein - none -
fig|6666666.229932.peg.354 CDS AEJN02000020.1 1080 1919 3 + 840 Predicted transcriptional regulator of the myo-inositol catabolic operon Inositol catabolism
fig|6666666.229932.peg.355 CDS AEJN02000020.1 3866 1956 -2 - 1911 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain Inositol catabolism;
Inositol catabolism
fig|6666666.229932.peg.356 CDS AEJN02000020.1 4177 6123 1 + 1947 Epi-inositol hydrolase (EC 3.7.1.-) Inositol catabolism
fig|6666666.229932.peg.357 CDS AEJN02000020.1 6178 7074 1 + 897 Inosose dehydratase (EC 4.2.1.44) Inositol catabolism
fig|6666666.229932.peg.358 CDS AEJN02000020.1 7077 8087 3 + 1011 Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229932.peg.359 CDS AEJN02000020.1 8692 8147 -1 - 546 Mannitol operon repressor Mannitol Utilization
fig|6666666.229932.peg.360 CDS AEJN02000020.1 9918 8770 -3 - 1149 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) Mannitol Utilization
fig|6666666.229932.peg.361 CDS AEJN02000020.1 11876 9996 -2 - 1881 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) Mannitol Utilization;
Mannitol Utilization;
Mannitol Utilization
fig|6666666.229932.peg.362 CDS AEJN02000020.1 13720 12287 -1 - 1434 Microcin H47 secretion protein - none -
fig|6666666.229932.peg.363 CDS AEJN02000020.1 15858 13735 -3 - 2124 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229932.peg.364 CDS AEJN02000020.1 19094 15927 -2 - 3168 bifunctional hemolysin-adenylate cyclase precursor cAMP signaling in bacteria
fig|6666666.229932.peg.365 CDS AEJN02000020.1 19613 19107 -2 - 507 RTX toxin activating lysine-acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229932.peg.366 CDS AEJN02000020.1 21982 20720 -1 - 1263 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine-glyoxylate cycle;
Serine Biosynthesis;
YrdC-YciO-Sua5 protein family
fig|6666666.229932.peg.367 CDS AEJN02000020.1 22659 22117 -3 - 543 hypothetical protein - none -
fig|6666666.229932.peg.368 CDS AEJN02000020.1 23037 22897 -3 - 141 hypothetical protein - none -
fig|6666666.229932.peg.369 CDS AEJN02000020.1 23189 23040 -2 - 150 hypothetical protein - none -
fig|6666666.229932.peg.370 CDS AEJN02000020.1 24280 23276 -1 - 1005 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) RNA methylation
fig|6666666.229932.peg.371 CDS AEJN02000020.1 24336 24785 3 + 450 DNA polymerase III psi subunit (EC 2.7.7.7) - none -
fig|6666666.229932.peg.372 CDS AEJN02000020.1 24795 25238 3 + 444 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229932.peg.373 CDS AEJN02000020.1 28629 25240 -3 - 3390 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229932.peg.374 CDS AEJN02000020.1 28977 28675 -3 - 303 FIG00696353: hypothetical protein - none -
fig|6666666.229932.peg.375 CDS AEJN02000020.1 29647 28952 -1 - 696 FIG00696574: hypothetical protein - none -
fig|6666666.229932.peg.376 CDS AEJN02000020.1 30360 29644 -3 - 717 Type II secretory pathway, component PulJ - none -
fig|6666666.229932.peg.377 CDS AEJN02000020.1 30991 30374 -1 - 618 Type II secretory pathway, pseudopilin PulG - none -
fig|6666666.229932.peg.378 CDS AEJN02000020.1 32067 31600 -3 - 468 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor Ton and Tol transport systems
fig|6666666.229932.peg.379 CDS AEJN02000020.1 33362 32082 -2 - 1281 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229932.peg.380 CDS AEJN02000020.1 34623 33397 -3 - 1227 TolA protein Ton and Tol transport systems
fig|6666666.229932.peg.381 CDS AEJN02000020.1 35062 34640 -1 - 423 Tol biopolymer transport system, TolR protein Ton and Tol transport systems
fig|6666666.229932.peg.382 CDS AEJN02000020.1 35837 35148 -2 - 690 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229932.peg.383 CDS AEJN02000020.1 36271 35867 -1 - 405 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229932.peg.384 CDS AEJN02000020.1 36336 36464 3 + 129 hypothetical protein - none -
fig|6666666.229932.peg.385 CDS AEJN02000020.1 37925 36789 -2 - 1137 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229932.peg.386 CDS AEJN02000020.1 39409 37940 -1 - 1470 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229932.peg.387 CDS AEJN02000020.1 39957 40268 3 + 312 Chromosome segregation ATPases - none -
fig|6666666.229932.peg.388 CDS AEJN02000020.1 41335 40322 -1 - 1014 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229932.peg.389 CDS AEJN02000020.1 41964 41350 -3 - 615 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229932.peg.390 CDS AEJN02000020.1 42600 42028 -3 - 573 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229932.peg.391 CDS AEJN02000020.1 43066 42656 -1 - 411 excinuclease ABC subunit A - none -
fig|6666666.229932.peg.392 CDS AEJN02000020.1 43818 43078 -3 - 741 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229932.peg.393 CDS AEJN02000020.1 44223 43852 -3 - 372 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 (nudB) Folate Biosynthesis
fig|6666666.229932.peg.394 CDS AEJN02000020.1 45672 44404 -3 - 1269 Mn2+ and Fe2+ transporters of the NRAMP family - none -
fig|6666666.229932.peg.395 CDS AEJN02000021.1 1085 183 -2 - 903 hypothetical protein - none -
fig|6666666.229932.peg.396 CDS AEJN02000021.1 2990 1131 -2 - 1860 Selenocysteine-specific translation elongation factor Selenocysteine metabolism
fig|6666666.229932.peg.397 CDS AEJN02000021.1 4381 2987 -1 - 1395 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) Selenocysteine metabolism
fig|6666666.229932.peg.398 CDS AEJN02000021.1 4525 6240 1 + 1716 Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type tRNA aminoacylation, Pro
fig|6666666.229932.peg.399 CDS AEJN02000021.1 6306 6635 3 + 330 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229932.peg.400 CDS AEJN02000021.1 6675 6929 3 + 255 YgfY COG2938 - none -
fig|6666666.229932.peg.401 CDS AEJN02000021.1 7062 7637 3 + 576 RNA polymerase sigma factor RpoE Transcription initiation, bacterial sigma factors
fig|6666666.229932.peg.402 CDS AEJN02000021.1 7676 8260 2 + 585 Sigma factor RpoE negative regulatory protein RseA Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229932.peg.403 CDS AEJN02000021.1 8343 9299 3 + 957 Sigma factor RpoE negative regulatory protein RseB precursor Periplasmic Stress Response;
Transcription initiation, bacterial sigma factors
fig|6666666.229932.peg.404 CDS AEJN02000021.1 9309 9746 3 + 438 Sigma factor RpoE regulatory protein RseC Transcription initiation, bacterial sigma factors
fig|6666666.229932.peg.405 CDS AEJN02000021.1 9827 10378 2 + 552 Molybdopterin-guanine dinucleotide biosynthesis protein MobB Molybdenum cofactor biosynthesis;
ar-431-EC Molybdopterin-guanine dinucleotide biosynthesis
fig|6666666.229932.peg.406 CDS AEJN02000021.1 10432 11187 1 + 756 Short chain dehydrogenase - none -
fig|6666666.229932.peg.407 CDS AEJN02000022.1 81 581 3 + 501 Protein sprT - none -
fig|6666666.229932.peg.408 CDS AEJN02000022.1 738 1979 3 + 1242 Serine transporter Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions
fig|6666666.229932.peg.409 CDS AEJN02000022.1 2072 3436 2 + 1365 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) Glycine and Serine Utilization;
Glycine and Serine Utilization;
Pyruvate Alanine Serine Interconversions;
Pyruvate Alanine Serine Interconversions
fig|6666666.229932.peg.410 CDS AEJN02000022.1 4667 3618 -2 - 1050 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229932.peg.411 CDS AEJN02000022.1 4962 6101 3 + 1140 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) CBSS-498211.3.peg.1415;
Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229932.peg.412 CDS AEJN02000022.1 6123 6674 3 + 552 Type IV pilus biogenesis protein PilF CBSS-498211.3.peg.1415
fig|6666666.229932.peg.413 CDS AEJN02000022.1 6684 6797 3 + 114 hypothetical protein - none -
fig|6666666.229932.peg.414 CDS AEJN02000022.1 6818 7873 2 + 1056 FIG021952: putative membrane protein CBSS-498211.3.peg.1415
fig|6666666.229932.peg.415 CDS AEJN02000022.1 7885 8988 1 + 1104 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-498211.3.peg.1415;
CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229932.peg.416 CDS AEJN02000022.1 9010 10287 1 + 1278 Histidyl-tRNA synthetase (EC 6.1.1.21) CBSS-498211.3.peg.1415;
tRNA aminoacylation, His
fig|6666666.229932.peg.417 CDS AEJN02000022.1 10298 10912 2 + 615 Mlr7403 protein CBSS-290633.1.peg.1906;
CBSS-498211.3.peg.1415
fig|6666666.229932.peg.418 CDS AEJN02000022.1 10965 11417 3 + 453 Putative protein-S-isoprenylcysteine methyltransferase - none -
fig|6666666.229932.peg.419 CDS AEJN02000022.1 12127 11423 -1 - 705 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229932.peg.420 CDS AEJN02000022.1 12113 12250 2 + 138 hypothetical protein - none -
fig|6666666.229932.peg.421 CDS AEJN02000022.1 13500 12247 -3 - 1254 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229932.peg.422 CDS AEJN02000022.1 14250 13624 -3 - 627 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis;
pyrimidine conversions
fig|6666666.229932.peg.423 CDS AEJN02000022.1 16232 14385 -2 - 1848 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229932.peg.424 CDS AEJN02000022.1 18776 16359 -2 - 2418 ATP-dependent protease La (EC 3.4.21.53) Type I Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229932.peg.425 CDS AEJN02000022.1 19213 20967 1 + 1755 Putative sulfate permease - none -
fig|6666666.229932.peg.426 CDS AEJN02000022.1 21895 20993 -1 - 903 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229932.peg.427 CDS AEJN02000022.1 22875 21940 -3 - 936 hypothetical protein - none -
fig|6666666.229932.peg.428 CDS AEJN02000022.1 24085 22901 -1 - 1185 Mannonate dehydratase (EC 4.2.1.8) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229932.peg.429 CDS AEJN02000022.1 24860 24105 -2 - 756 Hexuronate utilization operon transcriptional repressor ExuR D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229932.peg.430 CDS AEJN02000022.1 27250 24875 -1 - 2376 Alpha-glucosidase (EC 3.2.1.20) D-Galacturonate and D-Glucuronate Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229932.peg.431 CDS AEJN02000022.1 28575 27274 -3 - 1302 TRAP-type C4-dicarboxylate transport system, large permease component TRAP Transporter collection
fig|6666666.229932.peg.432 CDS AEJN02000022.1 29288 30280 2 + 993 TRAP-type C4-dicarboxylate transport system, periplasmic component TRAP Transporter collection
fig|6666666.229932.peg.433 CDS AEJN02000022.1 30335 31279 2 + 945 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229932.peg.434 CDS AEJN02000022.1 31291 32136 1 + 846 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229932.peg.435 CDS AEJN02000022.1 32148 33551 3 + 1404 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229932.peg.436 CDS AEJN02000022.1 33560 34201 2 + 642 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229932.peg.437 CDS AEJN02000022.1 35334 34288 -3 - 1047 iron chelatin ABC transporter periplasmic-binding protein - none -
fig|6666666.229932.peg.438 CDS AEJN02000022.1 36877 35645 -1 - 1233 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229932.peg.439 CDS AEJN02000022.1 37553 36897 -2 - 657 Ribose 5-phosphate isomerase A (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229932.peg.440 CDS AEJN02000022.1 38821 37652 -1 - 1170 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB CBSS-630.2.peg.3360;
Heat shock dnaK gene cluster extended;
Heme and Siroheme Biosynthesis;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229932.peg.441 CDS AEJN02000022.1 39144 38821 -3 - 324 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229932.peg.442 CDS AEJN02000022.1 39863 39183 -2 - 681 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229932.peg.443 CDS AEJN02000022.1 40218 39889 -3 - 330 DNA uptake protein and related DNA-binding proteins - none -
fig|6666666.229932.peg.444 CDS AEJN02000022.1 40220 40375 2 + 156 hypothetical protein - none -
fig|6666666.229932.peg.445 CDS AEJN02000022.1 41755 40811 -1 - 945 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229932.peg.446 CDS AEJN02000022.1 42249 41755 -3 - 495 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229932.peg.447 CDS AEJN02000022.1 45151 42329 -1 - 2823 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229932.peg.448 CDS AEJN02000022.1 45437 45189 -2 - 249 FIG01055344: hypothetical protein - none -
fig|6666666.229932.peg.449 CDS AEJN02000022.1 45663 45421 -3 - 243 putative ORF-4 - none -
fig|6666666.229932.peg.450 CDS AEJN02000022.1 46595 45663 -2 - 933 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229932.peg.451 CDS AEJN02000022.1 48250 46673 -1 - 1578 Proposed peptidoglycan lipid II flippase MurJ Peptidoglycan lipid II flippase
fig|6666666.229932.peg.452 CDS AEJN02000022.1 48518 48781 2 + 264 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229932.peg.453 CDS AEJN02000022.1 49568 48891 -2 - 678 Lipoate-protein ligase A Lipoic acid metabolism
fig|6666666.229932.peg.454 CDS AEJN02000022.1 49644 50588 3 + 945 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229932.peg.455 CDS AEJN02000022.1 50599 51090 1 + 492 FIG001943: hypothetical protein YajQ Broadly distributed proteins not in subsystems
fig|6666666.229932.peg.456 CDS AEJN02000022.1 51219 51803 3 + 585 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Transcription repair cluster;
Translation termination factors bacterial
fig|6666666.229932.peg.457 CDS AEJN02000022.1 51992 53083 2 + 1092 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229932.peg.458 CDS AEJN02000022.1 53419 54000 1 + 582 Hypothetical protein VC0266 (sugar utilization related?) VC0266
fig|6666666.229932.peg.459 CDS AEJN02000022.1 54072 54218 3 + 147 hypothetical protein - none -
fig|6666666.229932.peg.460 CDS AEJN02000022.1 54360 54473 3 + 114 hypothetical protein - none -
fig|6666666.229932.peg.461 CDS AEJN02000022.1 55385 54438 -2 - 948 Cysteine synthase (EC 2.5.1.47) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229932.peg.462 CDS AEJN02000022.1 56323 55499 -1 - 825 Sulfate transporter, CysZ-type Cysteine Biosynthesis
fig|6666666.229932.peg.463 CDS AEJN02000022.1 56464 57501 1 + 1038 Cell division protein ZipA Bacterial Cytoskeleton
fig|6666666.229932.peg.464 CDS AEJN02000022.1 57611 57498 -2 - 114 hypothetical protein - none -
fig|6666666.229932.peg.465 CDS AEJN02000022.1 57605 59620 2 + 2016 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229932.peg.466 CDS AEJN02000022.1 60267 59689 -3 - 579 Thymidine kinase (EC 2.7.1.21) pyrimidine conversions
fig|6666666.229932.peg.467 CDS AEJN02000022.1 60503 60270 -2 - 234 unknown - none -
fig|6666666.229932.peg.468 CDS AEJN02000022.1 61596 60568 -3 - 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ;
YrdC-YciO-Sua5 protein family
fig|6666666.229932.peg.469 CDS AEJN02000022.1 61786 61619 -1 - 168 hypothetical protein - none -
fig|6666666.229932.peg.470 CDS AEJN02000022.1 61821 62036 3 + 216 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229932.peg.471 CDS AEJN02000022.1 62158 63915 1 + 1758 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229932.peg.472 CDS AEJN02000022.1 63991 65841 1 + 1851 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229932.peg.473 CDS AEJN02000023.1 515 63 -2 - 453 hypothetical protein - none -
fig|6666666.229932.peg.474 CDS AEJN02000024.1 241 77 -1 - 165 hypothetical protein - none -
fig|6666666.229932.peg.475 CDS AEJN02000024.1 439 888 1 + 450 ImpA - none -
fig|6666666.229932.peg.476 CDS AEJN02000024.1 1294 1121 -1 - 174 hypothetical protein - none -
fig|6666666.229932.peg.477 CDS AEJN02000024.1 3062 1596 -2 - 1467 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.229932.peg.478 CDS AEJN02000024.1 3204 4136 3 + 933 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) Biotin biosynthesis;
Biotin biosynthesis;
Biotin synthesis cluster;
Biotin synthesis cluster
fig|6666666.229932.peg.479 CDS AEJN02000024.1 4223 4426 2 + 204 Osmotically inducible lipoprotein B precursor Osmotic stress cluster
fig|6666666.229932.peg.480 CDS AEJN02000025.1 463 597 1 + 135 hypothetical protein - none -
fig|6666666.229932.peg.481 CDS AEJN02000025.1 853 1527 1 + 675 hypothetical protein - none -
fig|6666666.229932.peg.482 CDS AEJN02000025.1 1792 2655 1 + 864 hypothetical protein - none -
fig|6666666.229932.peg.483 CDS AEJN02000025.1 2844 3137 3 + 294 hypothetical protein - none -
fig|6666666.229932.peg.484 CDS AEJN02000025.1 3488 4237 2 + 750 hypothetical protein - none -
fig|6666666.229932.peg.485 CDS AEJN02000025.1 4696 5265 1 + 570 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229932.peg.486 CDS AEJN02000025.1 5253 7448 3 + 2196 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229932.peg.487 CDS AEJN02000025.1 7445 9454 2 + 2010 Glycogen debranching enzyme (EC 3.2.1.-) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229932.peg.488 CDS AEJN02000025.1 9481 10791 1 + 1311 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229932.peg.489 CDS AEJN02000025.1 10993 12432 1 + 1440 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) Glycogen metabolism;
Glycogen metabolism cluster
fig|6666666.229932.peg.490 CDS AEJN02000025.1 12556 15021 1 + 2466 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization
fig|6666666.229932.peg.491 CDS AEJN02000025.1 15745 15140 -1 - 606 DedA protein DedA family of inner membrane proteins;
Uptake of selenate and selenite
fig|6666666.229932.peg.492 CDS AEJN02000025.1 15959 16246 2 + 288 LSU ribosomal protein L25p Transcription repair cluster
fig|6666666.229932.peg.493 CDS AEJN02000025.1 16394 17002 2 + 609 lipoprotein HlpB - none -
fig|6666666.229932.peg.494 CDS AEJN02000025.1 17150 18031 2 + 882 Murein-DD-endopeptidase (EC 3.4.99.-) Peptidoglycan Biosynthesis
fig|6666666.229932.peg.495 CDS AEJN02000025.1 18209 19537 2 + 1329 Chromosome partition protein MukF DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229932.peg.496 CDS AEJN02000025.1 19565 19702 2 + 138 hypothetical protein - none -
fig|6666666.229932.peg.497 CDS AEJN02000025.1 19717 23178 1 + 3462 Putative 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase (EC 6.2.1.20) - none -
fig|6666666.229932.peg.498 CDS AEJN02000025.1 23199 23939 3 + 741 Chromosome partition protein MukE DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229932.peg.499 CDS AEJN02000025.1 23939 28429 2 + 4491 Chromosome partition protein MukB DNA structural proteins, bacterial;
MukBEF Chromosome Condensation
fig|6666666.229932.peg.500 CDS AEJN02000025.1 28506 29378 3 + 873 Integral membrane protein - none -
fig|6666666.229932.peg.501 CDS AEJN02000025.1 29390 30817 2 + 1428 Exodeoxyribonuclease I (EC 3.1.11.1) DNA Repair Base Excision
fig|6666666.229932.peg.502 CDS AEJN02000026.1 285 431 3 + 147 hypothetical protein - none -
fig|6666666.229932.peg.503 CDS AEJN02000027.1 773 261 -2 - 513 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) Heme and Siroheme Biosynthesis;
Transport system clustering with HemG
fig|6666666.229932.peg.504 CDS AEJN02000027.1 2236 773 -1 - 1464 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229932.peg.505 CDS AEJN02000027.1 2470 2255 -1 - 216 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229932.peg.506 CDS AEJN02000027.1 2620 2501 -1 - 120 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229932.peg.507 CDS AEJN02000027.1 2769 2614 -3 - 156 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229932.peg.508 CDS AEJN02000027.1 2894 2766 -2 - 129 hypothetical protein - none -
fig|6666666.229932.peg.509 CDS AEJN02000027.1 2971 3096 1 + 126 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229932.peg.510 CDS AEJN02000027.1 3423 4694 3 + 1272 Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229932.peg.511 CDS AEJN02000027.1 4710 5393 3 + 684 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - none -
fig|6666666.229932.peg.512 CDS AEJN02000027.1 5586 6749 3 + 1164 Tyrosine-specific transport protein - none -
fig|6666666.229932.peg.513 CDS AEJN02000027.1 7434 7045 -3 - 390 LSU ribosomal protein L17p - none -
fig|6666666.229932.peg.514 CDS AEJN02000027.1 8465 7476 -2 - 990 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229932.peg.515 CDS AEJN02000027.1 8925 8494 -3 - 432 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229932.peg.516 CDS AEJN02000027.1 9533 9144 -2 - 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229932.peg.517 CDS AEJN02000027.1 9905 9549 -2 - 357 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229932.peg.518 CDS AEJN02000027.1 11508 10183 -3 - 1326 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229932.peg.519 CDS AEJN02000027.1 11946 11512 -3 - 435 LSU ribosomal protein L15p (L27Ae) - none -
fig|6666666.229932.peg.520 CDS AEJN02000027.1 12636 12136 -3 - 501 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229932.peg.521 CDS AEJN02000027.1 13005 12652 -3 - 354 LSU ribosomal protein L18p (L5e) - none -
fig|6666666.229932.peg.522 CDS AEJN02000027.1 13330 13019 -1 - 312 LSU ribosomal protein L6p (L9e) - none -
fig|6666666.229932.peg.523 CDS AEJN02000027.1 13960 13568 -1 - 393 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229932.peg.524 CDS AEJN02000027.1 14302 13997 -1 - 306 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229932.peg.525 CDS AEJN02000027.1 14743 14315 -1 - 429 LSU ribosomal protein L5p (L11e) - none -
fig|6666666.229932.peg.526 CDS AEJN02000027.1 15183 14872 -3 - 312 LSU ribosomal protein L24p (L26e) - none -
fig|6666666.229932.peg.527 CDS AEJN02000027.1 15892 16176 1 + 285 Mobile element protein - none -
fig|6666666.229932.peg.528 CDS AEJN02000027.1 17202 16180 -3 - 1023 Porphobilinogen synthase (EC 4.2.1.24) Heme and Siroheme Biosynthesis
fig|6666666.229932.peg.529 CDS AEJN02000027.1 17987 17223 -2 - 765 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229932.peg.530 CDS AEJN02000027.1 18687 18025 -3 - 663 Twin-arginine translocation protein TatB Twin-arginine translocation system
fig|6666666.229932.peg.531 CDS AEJN02000027.1 18915 18691 -3 - 225 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229932.peg.532 CDS AEJN02000027.1 19193 19062 -2 - 132 hypothetical protein - none -
fig|6666666.229932.peg.533 CDS AEJN02000028.1 1362 514 -3 - 849 filamentation induced by cAMP protein Fic-like protein - none -
fig|6666666.229932.peg.534 CDS AEJN02000028.1 1871 1990 2 + 120 hypothetical protein - none -
fig|6666666.229932.peg.535 CDS AEJN02000028.1 2203 1961 -1 - 243 DNA-damage-inducible protein d - none -
fig|6666666.229932.peg.536 CDS AEJN02000028.1 3808 2384 -1 - 1425 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229932.peg.537 CDS AEJN02000028.1 5354 3819 -2 - 1536 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) Phosphate metabolism
fig|6666666.229932.peg.538 CDS AEJN02000028.1 5647 6372 1 + 726 Sugar/maltose fermentation stimulation protein homolog Fermentations: Mixed acid
fig|6666666.229932.peg.539 CDS AEJN02000028.1 6620 7807 2 + 1188 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229932.peg.540 CDS AEJN02000028.1 7934 8545 2 + 612 hypothetical protein - none -
fig|6666666.229932.peg.541 CDS AEJN02000028.1 8644 8790 1 + 147 hypothetical protein - none -
fig|6666666.229932.peg.542 CDS AEJN02000028.1 9752 8832 -2 - 921 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229932.peg.543 CDS AEJN02000028.1 10138 9752 -1 - 387 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229932.peg.544 CDS AEJN02000029.1 20 319 2 + 300 hypothetical protein - none -
fig|6666666.229932.peg.545 CDS AEJN02000029.1 650 459 -2 - 192 Mobile element protein - none -
fig|6666666.229932.peg.546 CDS AEJN02000029.1 640 765 1 + 126 hypothetical protein - none -
fig|6666666.229932.peg.547 CDS AEJN02000029.1 977 1183 2 + 207 Tfp pilus assembly protein, pilus retraction ATPase PilT - none -
fig|6666666.229932.peg.548 CDS AEJN02000029.1 1664 2794 2 + 1131 Cystathionine gamma-synthase (EC 2.5.1.48) Methionine Biosynthesis
fig|6666666.229932.peg.549 CDS AEJN02000029.1 2818 3813 1 + 996 D-lactate dehydrogenase (EC 1.1.1.28) Fermentations: Lactate;
Fermentations: Mixed acid
fig|6666666.229932.peg.550 CDS AEJN02000029.1 4021 4236 1 + 216 Thioredoxin - none -
fig|6666666.229932.peg.551 CDS AEJN02000029.1 5394 4435 -3 - 960 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229932.peg.552 CDS AEJN02000029.1 5626 5504 -1 - 123 hypothetical protein - none -
fig|6666666.229932.peg.553 CDS AEJN02000029.1 5730 5864 3 + 135 hypothetical protein - none -
fig|6666666.229932.peg.554 CDS AEJN02000029.1 5861 8752 2 + 2892 Ribonuclease E (EC 3.1.26.12) RNA processing and degradation, bacterial;
Ribosome biogenesis bacterial
fig|6666666.229932.peg.555 CDS AEJN02000029.1 9580 9191 -1 - 390 INTEGRAL MEMBRANE PROTEIN (Rhomboid family) - none -
fig|6666666.229932.peg.556 CDS AEJN02000029.1 9558 9671 3 + 114 hypothetical protein - none -
fig|6666666.229932.peg.557 CDS AEJN02000029.1 11450 9660 -2 - 1791 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229932.peg.558 CDS AEJN02000029.1 11593 12162 1 + 570 Lysine decarboxylase family - none -
fig|6666666.229932.peg.559 CDS AEJN02000029.1 12374 12640 2 + 267 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent - none -
fig|6666666.229932.peg.560 CDS AEJN02000029.1 13040 13747 2 + 708 Aerobic respiration control protein arcA - none -
fig|6666666.229932.peg.561 CDS AEJN02000029.1 14849 13854 -2 - 996 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229932.peg.562 CDS AEJN02000029.1 15829 14846 -1 - 984 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229932.peg.563 CDS AEJN02000029.1 16777 15839 -1 - 939 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229932.peg.564 CDS AEJN02000029.1 17707 16787 -1 - 921 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229932.peg.565 CDS AEJN02000029.1 19433 17808 -2 - 1626 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229932.peg.566 CDS AEJN02000029.1 19456 19593 1 + 138 hypothetical protein - none -
fig|6666666.229932.peg.567 CDS AEJN02000029.1 19803 20285 3 + 483 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229932.peg.568 CDS AEJN02000029.1 20237 20356 2 + 120 hypothetical protein - none -
fig|6666666.229932.peg.569 CDS AEJN02000029.1 21519 20353 -3 - 1167 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229932.peg.570 CDS AEJN02000029.1 22473 21556 -3 - 918 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229932.peg.571 CDS AEJN02000029.1 23483 22551 -2 - 933 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229932.peg.572 CDS AEJN02000029.1 23812 23555 -1 - 258 LSU ribosomal protein L27p CBSS-176279.3.peg.868
fig|6666666.229932.peg.573 CDS AEJN02000029.1 24090 23833 -3 - 258 LSU ribosomal protein L21p CBSS-176279.3.peg.868
fig|6666666.229932.peg.574 CDS AEJN02000029.1 24166 24339 1 + 174 hypothetical protein - none -
fig|6666666.229932.peg.575 CDS AEJN02000029.1 24413 25384 2 + 972 Octaprenyl diphosphate synthase (EC 2.5.1.90) Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229932.peg.576 CDS AEJN02000029.1 25386 26117 3 + 732 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229932.peg.577 CDS AEJN02000029.1 27319 28743 1 + 1425 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA-methylthiotransferase containing cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229932.peg.578 CDS AEJN02000029.1 29367 28801 -3 - 567 Primosomal replication protein N@1@1 - none -
fig|6666666.229932.peg.579 CDS AEJN02000029.1 30783 29431 -3 - 1353 Histidine permease YuiF - none -
fig|6666666.229932.peg.580 CDS AEJN02000029.1 31788 31135 -3 - 654 Ribonuclease T (EC 3.1.13.-) tRNA processing
fig|6666666.229932.peg.581 CDS AEJN02000029.1 32282 31875 -2 - 408 Lactoylglutathione lyase (EC 4.4.1.5) Glutathione: Non-redox reactions;
Methylglyoxal Metabolism
fig|6666666.229932.peg.582 CDS AEJN02000029.1 34393 32441 -1 - 1953 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229932.peg.583 CDS AEJN02000029.1 34793 36124 2 + 1332 Glycerol-3-phosphate transporter - none -
fig|6666666.229932.peg.584 CDS AEJN02000029.1 36267 38834 3 + 2568 FIG00362583: hypothetical protein - none -
fig|6666666.229932.peg.585 CDS AEJN02000029.1 39639 38914 -3 - 726 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229932.peg.586 CDS AEJN02000029.1 40238 39711 -2 - 528 membrane protein, putative - none -
fig|6666666.229932.peg.587 CDS AEJN02000029.1 40446 42224 3 + 1779 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229932.peg.588 CDS AEJN02000031.1 1574 114 -2 - 1461 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229932.peg.589 CDS AEJN02000031.1 1689 2153 3 + 465 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) Purine conversions
fig|6666666.229932.peg.590 CDS AEJN02000031.1 4584 2242 -3 - 2343 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor Lipopolysaccharide assembly
fig|6666666.229932.peg.591 CDS AEJN02000031.1 5210 4650 -2 - 561 DNA-3-methyladenine glycosylase (EC 3.2.2.20) CBSS-326442.4.peg.1852;
DNA Repair Base Excision
fig|6666666.229932.peg.592 CDS AEJN02000031.1 5410 6015 1 + 606 probable integral membrane protein Cj0014c - none -
fig|6666666.229932.peg.593 CDS AEJN02000031.1 7318 6068 -1 - 1251 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229932.peg.594 CDS AEJN02000031.1 7455 7336 -3 - 120 hypothetical protein - none -
fig|6666666.229932.peg.595 CDS AEJN02000031.1 7578 7892 3 + 315 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly Biogenesis of cytochrome c oxidases
fig|6666666.229932.peg.596 CDS AEJN02000031.1 7889 9778 2 + 1890 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229932.peg.597 CDS AEJN02000031.1 9875 12295 2 + 2421 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229932.peg.598 CDS AEJN02000031.1 13264 12350 -1 - 915 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229932.peg.599 CDS AEJN02000032.1 429 76 -3 - 354 Phage DNA-binding protein Phage packaging machinery
fig|6666666.229932.peg.600 CDS AEJN02000032.1 840 433 -3 - 408 Adenine-specific methyltransferase (EC 2.1.1.72) CBSS-257314.1.peg.752
fig|6666666.229932.peg.601 CDS AEJN02000032.1 1738 950 -1 - 789 FIG00696091: hypothetical protein - none -
fig|6666666.229932.peg.602 CDS AEJN02000032.1 2694 1735 -3 - 960 FIG00696091: hypothetical protein - none -
fig|6666666.229932.peg.603 CDS AEJN02000032.1 3065 2703 -2 - 363 Phage protein - none -
fig|6666666.229932.peg.604 CDS AEJN02000032.1 3280 3068 -1 - 213 hypothetical protein - none -
fig|6666666.229932.peg.605 CDS AEJN02000032.1 3665 3465 -2 - 201 hypothetical protein - none -
fig|6666666.229932.peg.606 CDS AEJN02000032.1 4064 4747 2 + 684 transcriptional activator-regulatory protein - none -
fig|6666666.229932.peg.607 CDS AEJN02000032.1 5178 5807 3 + 630 hypothetical protein - none -
fig|6666666.229932.peg.608 CDS AEJN02000032.1 5990 6406 2 + 417 hypothetical protein - none -
fig|6666666.229932.peg.609 CDS AEJN02000032.1 7169 6654 -2 - 516 Phage tail protein Phage tail proteins
fig|6666666.229932.peg.610 CDS AEJN02000033.1 5 193 2 + 189 FIG00696317: hypothetical protein - none -
fig|6666666.229932.peg.611 CDS AEJN02000033.1 877 215 -1 - 663 Septum site-determining protein MinC Bacterial Cell Division;
Bacterial Cytoskeleton;
Septum site-determining cluster Min
fig|6666666.229932.peg.612 CDS AEJN02000033.1 961 1212 1 + 252 Protein YcgL CBSS-243277.1.peg.4359
fig|6666666.229932.peg.613 CDS AEJN02000033.1 2118 1609 -3 - 510 probable lipoprotein NlpC - none -
fig|6666666.229932.peg.614 CDS AEJN02000033.1 3152 2298 -2 - 855 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation;
KDO2-Lipid A biosynthesis
fig|6666666.229932.peg.615 CDS AEJN02000033.1 4061 3162 -2 - 900 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229932.peg.616 CDS AEJN02000033.1 5186 4101 -2 - 1086 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial;
YrdC-YciO-Sua5 protein family
fig|6666666.229932.peg.617 CDS AEJN02000033.1 5782 5327 -1 - 456 Outer membrane lipoprotein - none -
fig|6666666.229932.peg.618 CDS AEJN02000033.1 6411 5824 -3 - 588 Protein yecM - none -
fig|6666666.229932.peg.619 CDS AEJN02000033.1 6508 8241 1 + 1734 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229932.peg.620 CDS AEJN02000033.1 8830 8717 -1 - 114 hypothetical protein - none -
fig|6666666.229932.peg.621 CDS AEJN02000033.1 9818 8838 -2 - 981 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229932.peg.622 CDS AEJN02000033.1 9879 10358 3 + 480 Cys-tRNA(Pro) deacylase YbaK tRNA aminoacylation, Pro
fig|6666666.229932.peg.623 CDS AEJN02000034.1 655 416 -1 - 240 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229932.peg.624 CDS AEJN02000034.1 2433 823 -3 - 1611 Protein TadG, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229932.peg.625 CDS AEJN02000034.1 3672 3097 -3 - 576 Flp pilus assembly membrane protein TadE Widespread colonization island
fig|6666666.229932.peg.626 CDS AEJN02000034.1 4448 3687 -2 - 762 Flp pilus assembly protein TadD, contains TPR repeat Widespread colonization island
fig|6666666.229932.peg.627 CDS AEJN02000034.1 5304 4438 -3 - 867 Type II/IV secretion system protein TadC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229932.peg.628 CDS AEJN02000034.1 6188 5301 -2 - 888 Flp pilus assembly protein TadB Widespread colonization island
fig|6666666.229932.peg.629 CDS AEJN02000034.1 7468 6188 -1 - 1281 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily Widespread colonization island
fig|6666666.229932.peg.630 CDS AEJN02000034.1 8606 7482 -2 - 1125 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229932.peg.631 CDS AEJN02000034.1 9125 8622 -2 - 504 Flp pilus assembly protein RcpB Widespread colonization island
fig|6666666.229932.peg.632 CDS AEJN02000034.1 9571 9122 -1 - 450 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229932.peg.633 CDS AEJN02000034.1 10385 9657 -2 - 729 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly Widespread colonization island
fig|6666666.229932.peg.634 CDS AEJN02000034.1 11331 10507 -3 - 825 Flp pilus assembly protein RcpC/CpaB Widespread colonization island
fig|6666666.229932.peg.635 CDS AEJN02000034.1 11563 11387 -1 - 177 Type IV prepilin peptidase TadV/CpaA Widespread colonization island
fig|6666666.229932.peg.636 CDS AEJN02000034.1 12384 12157 -3 - 228 Flp pilus assembly protein, pilin Flp Widespread colonization island
fig|6666666.229932.peg.637 CDS AEJN02000034.1 12959 13414 2 + 456 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229932.peg.638 CDS AEJN02000034.1 13763 14263 2 + 501 unknown - none -
fig|6666666.229932.peg.639 CDS AEJN02000034.1 14267 16189 2 + 1923 Predicted P-loop ATPase fused to an acetyltransferase COG1444 tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229932.peg.640 CDS AEJN02000034.1 16231 16404 1 + 174 hypothetical protein - none -
fig|6666666.229932.peg.641 CDS AEJN02000034.1 16858 20316 1 + 3459 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial;
Transcription repair cluster
fig|6666666.229932.peg.642 CDS AEJN02000034.1 20418 21002 3 + 585 Phosphoheptose isomerase 1 (EC 5.3.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229932.peg.643 CDS AEJN02000034.1 21231 21815 3 + 585 Arginine ABC transporter, ATP-binding protein ArtP Arginine and Ornithine Degradation
fig|6666666.229932.peg.644 CDS AEJN02000034.1 21836 22555 2 + 720 Arginine ABC transporter, periplasmic arginine-binding protein ArtI Arginine and Ornithine Degradation
fig|6666666.229932.peg.645 CDS AEJN02000034.1 22560 23222 3 + 663 Arginine ABC transporter, permease protein ArtQ Arginine and Ornithine Degradation
fig|6666666.229932.peg.646 CDS AEJN02000034.1 23225 23908 2 + 684 Arginine ABC transporter, permease protein ArtM Arginine and Ornithine Degradation
fig|6666666.229932.peg.647 CDS AEJN02000034.1 24450 26045 3 + 1596 Carbon starvation protein A Carbon Starvation
fig|6666666.229932.peg.648 CDS AEJN02000034.1 26312 26770 2 + 459 Cell division protein MraZ 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229932.peg.649 CDS AEJN02000034.1 26880 27848 3 + 969 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229932.peg.650 CDS AEJN02000034.1 27995 28165 2 + 171 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229932.peg.651 CDS AEJN02000034.1 28183 30006 1 + 1824 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229932.peg.652 CDS AEJN02000034.1 30024 31490 3 + 1467 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229932.peg.653 CDS AEJN02000034.1 31546 32874 1 + 1329 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229932.peg.654 CDS AEJN02000034.1 32868 33953 3 + 1086 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) Peptidoglycan Biosynthesis
fig|6666666.229932.peg.655 CDS AEJN02000034.1 33980 35284 2 + 1305 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo
fig|6666666.229932.peg.656 CDS AEJN02000034.1 35299 36489 1 + 1191 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229932.peg.657 CDS AEJN02000034.1 36529 37593 1 + 1065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) Peptidoglycan Biosynthesis;
cell division core of larger cluster
fig|6666666.229932.peg.658 CDS AEJN02000034.1 37664 39094 2 + 1431 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229932.peg.659 CDS AEJN02000034.1 39107 40036 2 + 930 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan Biosynthesis;
Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229932.peg.660 CDS AEJN02000034.1 40033 40800 1 + 768 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229932.peg.661 CDS AEJN02000034.1 40861 42105 1 + 1245 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229932.peg.662 CDS AEJN02000034.1 42189 43469 3 + 1281 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229932.peg.663 CDS AEJN02000034.1 43507 44424 1 + 918 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.108) KDO2-Lipid A biosynthesis
fig|6666666.229932.peg.664 CDS AEJN02000034.1 44623 45783 1 + 1161 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229932.peg.665 CDS AEJN02000034.1 45917 47797 2 + 1881 Chaperone protein HtpG Protein chaperones
fig|6666666.229932.peg.666 CDS AEJN02000034.1 47863 48207 1 + 345 FIG138056: a glutathione-dependent thiol reductase A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis
fig|6666666.229932.peg.667 CDS AEJN02000034.1 48344 49477 2 + 1134 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) A Glutathione-dependent Thiol Reductase Associated with a Step in Lysine Biosynthesis;
Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229932.peg.668 CDS AEJN02000034.1 50372 50995 2 + 624 ADP-ribose pyrophosphatase (EC 3.6.1.13) CBSS-216591.1.peg.168;
NAD and NADP cofactor biosynthesis global;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229932.peg.669 CDS AEJN02000034.1 51046 51870 1 + 825 3@1,5@1-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) cAMP signaling in bacteria
fig|6666666.229932.peg.670 CDS AEJN02000034.1 53208 52381 -3 - 828 FIG00711691: hypothetical protein - none -
fig|6666666.229932.peg.671 CDS AEJN02000034.1 53645 53181 -2 - 465 FIG00710847: hypothetical protein - none -
fig|6666666.229932.peg.672 CDS AEJN02000034.1 53867 54697 2 + 831 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229932.peg.673 CDS AEJN02000034.1 54822 56036 3 + 1215 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229932.peg.674 CDS AEJN02000034.1 57143 56115 -2 - 1029 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Butanol Biosynthesis;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.675 CDS AEJN02000034.1 57414 59552 3 + 2139 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) RNA methylation
fig|6666666.229932.peg.676 CDS AEJN02000034.1 59993 59649 -2 - 345 Fumarate reductase subunit D Succinate dehydrogenase
fig|6666666.229932.peg.677 CDS AEJN02000034.1 60395 60003 -2 - 393 Fumarate reductase subunit C Succinate dehydrogenase
fig|6666666.229932.peg.678 CDS AEJN02000034.1 61177 60407 -1 - 771 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229932.peg.679 CDS AEJN02000034.1 62990 61182 -2 - 1809 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Serine-glyoxylate cycle;
Succinate dehydrogenase;
TCA Cycle
fig|6666666.229932.peg.680 CDS AEJN02000034.1 63298 64269 1 + 972 Translation elongation factor P Lys34:lysine transferase Translation elongation factor P lysylation
fig|6666666.229932.peg.681 CDS AEJN02000034.1 65102 64335 -2 - 768 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229932.peg.682 CDS AEJN02000034.1 66085 65102 -1 - 984 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) - none -
fig|6666666.229932.peg.683 CDS AEJN02000034.1 67074 66085 -3 - 990 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) - none -
fig|6666666.229932.peg.684 CDS AEJN02000034.1 67628 67074 -2 - 555 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229932.peg.685 CDS AEJN02000034.1 67966 67658 -1 - 309 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) - none -
fig|6666666.229932.peg.686 CDS AEJN02000034.1 68805 68035 -3 - 771 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229932.peg.687 CDS AEJN02000034.1 69104 68781 -2 - 324 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229932.peg.688 CDS AEJN02000034.1 69175 69618 1 + 444 FIG000557: hypothetical protein co-occurring with RecR DNA processing cluster
fig|6666666.229932.peg.689 CDS AEJN02000034.1 69703 70305 1 + 603 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229932.peg.690 CDS AEJN02000034.1 70337 72274 2 + 1938 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229932.peg.691 CDS AEJN02000034.1 72288 72419 3 + 132 hypothetical protein - none -
fig|6666666.229932.peg.692 CDS AEJN02000034.1 72447 72776 3 + 330 Preprotein translocase subunit SecG (TC 3.A.5.1.1) CBSS-331978.3.peg.2915;
Murein hydrolase regulation and cell death
fig|6666666.229932.peg.693 CDS AEJN02000034.1 72960 73214 3 + 255 hypothetical protein - none -
fig|6666666.229932.peg.694 CDS AEJN02000034.1 73214 73414 2 + 201 hypothetical protein - none -
fig|6666666.229932.peg.695 CDS AEJN02000034.1 74244 73471 -3 - 774 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) Peptidoglycan Biosynthesis
fig|6666666.229932.peg.696 CDS AEJN02000034.1 74530 74222 -1 - 309 Transcriptional repressor protein TrpR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Tryptophan synthesis
fig|6666666.229932.peg.697 CDS AEJN02000034.1 76779 74563 -3 - 2217 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229932.peg.698 CDS AEJN02000034.1 77602 77306 -1 - 297 YciL protein Broadly distributed proteins not in subsystems;
CBSS-211586.9.peg.2729
fig|6666666.229932.peg.699 CDS AEJN02000034.1 78075 77605 -3 - 471 Acyl-CoA thioesterase YciA, involved in membrane biogenesis CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229932.peg.700 CDS AEJN02000034.1 78630 78079 -3 - 552 Intracellular septation protein IspA CBSS-211586.9.peg.2729;
Intracellular septation in Enterobacteria
fig|6666666.229932.peg.701 CDS AEJN02000034.1 79394 78636 -2 - 759 Membrane protein involved in the export of O-antigen and teichoic acid - none -
fig|6666666.229932.peg.702 CDS AEJN02000034.1 79586 79428 -2 - 159 hypothetical protein - none -
fig|6666666.229932.peg.703 CDS AEJN02000034.1 79665 80312 3 + 648 Outer membrane protein W precursor - none -
fig|6666666.229932.peg.704 CDS AEJN02000034.1 82055 80379 -2 - 1677 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229932.peg.705 CDS AEJN02000034.1 83046 82129 -3 - 918 NAD kinase (EC 2.7.1.23) NAD and NADP cofactor biosynthesis global
fig|6666666.229932.peg.706 CDS AEJN02000034.1 83219 83091 -2 - 129 hypothetical protein - none -
fig|6666666.229932.peg.707 CDS AEJN02000034.1 83187 83765 3 + 579 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229932.peg.708 CDS AEJN02000034.1 85845 83875 -3 - 1971 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229932.peg.709 CDS AEJN02000035.1 2119 1052 -1 - 1068 Probable phospholipase protein - none -
fig|6666666.229932.peg.710 CDS AEJN02000035.1 3255 2116 -3 - 1140 Probable phospholipase protein - none -
fig|6666666.229932.peg.711 CDS AEJN02000037.1 1253 141 -2 - 1113 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like Scaffold proteins for [4Fe-4S] cluster assembly (MRP family)
fig|6666666.229932.peg.712 CDS AEJN02000037.1 1426 3486 1 + 2061 Methionyl-tRNA synthetase (EC 6.1.1.10) Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA aminoacylation, Met
fig|6666666.229932.peg.713 CDS AEJN02000037.1 3814 3620 -1 - 195 Believed to be involved in assembly of Fe-S clusters tRNA modification Bacteria
fig|6666666.229932.peg.714 CDS AEJN02000037.1 4155 3814 -3 - 342 Ferredoxin, 2Fe-2S Alanine biosynthesis;
Soluble cytochromes and functionally related electron carriers;
tRNA modification Bacteria
fig|6666666.229932.peg.715 CDS AEJN02000037.1 6026 4167 -2 - 1860 Chaperone protein HscA Alanine biosynthesis;
Protein chaperones;
tRNA modification Bacteria
fig|6666666.229932.peg.716 CDS AEJN02000037.1 6568 6047 -1 - 522 Chaperone protein HscB Protein chaperones;
tRNA modification Bacteria
fig|6666666.229932.peg.717 CDS AEJN02000037.1 6903 6580 -3 - 324 Iron binding protein IscA for iron-sulfur cluster assembly Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229932.peg.718 CDS AEJN02000037.1 7418 7035 -2 - 384 Iron-sulfur cluster assembly scaffold protein IscU Alanine biosynthesis;
tRNA modification Bacteria
fig|6666666.229932.peg.719 CDS AEJN02000037.1 8692 7478 -1 - 1215 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Alanine biosynthesis;
Thiamin biosynthesis;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229932.peg.720 CDS AEJN02000037.1 9226 8789 -1 - 438 Iron-sulfur cluster regulator IscR Alanine biosynthesis;
Rrf2 family transcriptional regulators
fig|6666666.229932.peg.721 CDS AEJN02000037.1 10028 9288 -2 - 741 tRNA:Cm32/Um32 methyltransferase RNA methylation;
tRNA modification Bacteria
fig|6666666.229932.peg.722 CDS AEJN02000037.1 10179 10979 3 + 801 Inositol-1-monophosphatase (EC 3.1.3.25) - none -
fig|6666666.229932.peg.723 CDS AEJN02000037.1 11260 11135 -1 - 126 hypothetical protein - none -
fig|6666666.229932.peg.724 CDS AEJN02000037.1 11819 11670 -2 - 150 hypothetical protein - none -
fig|6666666.229932.peg.725 CDS AEJN02000039.1 1048 581 -1 - 468 Phosphohistidine phosphatase SixA - none -
fig|6666666.229932.peg.726 CDS AEJN02000039.1 2398 1061 -1 - 1338 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229932.peg.727 CDS AEJN02000039.1 3253 2426 -1 - 828 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229932.peg.728 CDS AEJN02000039.1 4505 3423 -2 - 1083 DNA polymerase IV (EC 2.7.7.7) DNA repair, bacterial
fig|6666666.229932.peg.729 CDS AEJN02000040.1 1158 358 -3 - 801 hypothetical protein - none -
fig|6666666.229932.peg.730 CDS AEJN02000040.1 3311 1161 -2 - 2151 hypothetical protein - none -
fig|6666666.229932.peg.731 CDS AEJN02000040.1 3912 3304 -3 - 609 hypothetical protein - none -
fig|6666666.229932.peg.732 CDS AEJN02000040.1 4641 3916 -3 - 726 hypothetical protein - none -
fig|6666666.229932.peg.733 CDS AEJN02000041.1 92 271 2 + 180 FIG050068: DNA-binding protein - none -
fig|6666666.229932.peg.734 CDS AEJN02000041.1 1031 381 -2 - 651 Integrase - none -
fig|6666666.229932.peg.735 CDS AEJN02000041.1 1471 1085 -1 - 387 Phage integrase - none -
fig|6666666.229932.peg.736 CDS AEJN02000041.1 2008 2367 1 + 360 Antiholin-like protein LrgA Murein hydrolase regulation and cell death
fig|6666666.229932.peg.737 CDS AEJN02000041.1 2367 3059 3 + 693 LrgA-associated membrane protein LrgB Murein hydrolase regulation and cell death
fig|6666666.229932.peg.738 CDS AEJN02000041.1 3061 4413 1 + 1353 Putative dNTP triphosphohydrolase, associated with nucleotidase YfbR Purine conversions;
dNTP triphosphohydrolase protein family
fig|6666666.229932.peg.739 CDS AEJN02000041.1 4743 4450 -3 - 294 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229932.peg.740 CDS AEJN02000041.1 5047 4745 -1 - 303 FIG022160: hypothetical toxin - none -
fig|6666666.229932.peg.741 CDS AEJN02000041.1 5206 5087 -1 - 120 hypothetical protein - none -
fig|6666666.229932.peg.742 CDS AEJN02000041.1 5200 7146 1 + 1947 ABC transporter ATP-binding protein - none -
fig|6666666.229932.peg.743 CDS AEJN02000042.1 393 118 -3 - 276 Mobile element protein - none -
fig|6666666.229932.peg.744 CDS AEJN02000043.1 1771 674 -1 - 1098 VgrG protein - none -
fig|6666666.229932.peg.745 CDS AEJN02000044.1 31 1323 1 + 1293 Cytochrome c551 peroxidase (EC 1.11.1.5) Protection from Reactive Oxygen Species
fig|6666666.229932.peg.746 CDS AEJN02000044.1 2568 1411 -3 - 1158 Ribonuclease D (EC 3.1.26.3) tRNA processing
fig|6666666.229932.peg.747 CDS AEJN02000044.1 3717 2635 -3 - 1083 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229932.peg.748 CDS AEJN02000044.1 4095 3718 -3 - 378 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229932.peg.749 CDS AEJN02000044.1 4320 4174 -3 - 147 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229932.peg.750 CDS AEJN02000044.1 4920 4363 -3 - 558 Starvation lipoprotein Slp paralog Carbon Starvation
fig|6666666.229932.peg.751 CDS AEJN02000044.1 5674 4952 -1 - 723 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229932.peg.752 CDS AEJN02000044.1 7614 5677 -3 - 1938 DinG family ATP-dependent helicase YoaA DNA repair, bacterial DinG and relatives
fig|6666666.229932.peg.753 CDS AEJN02000044.1 7690 8508 1 + 819 Aldose 1-epimerase - none -
fig|6666666.229932.peg.754 CDS AEJN02000044.1 9705 8803 -3 - 903 Maltose operon periplasmic protein MalM Maltose and Maltodextrin Utilization
fig|6666666.229932.peg.755 CDS AEJN02000044.1 11074 9791 -1 - 1284 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) Maltose and Maltodextrin Utilization
fig|6666666.229932.peg.756 CDS AEJN02000044.1 12269 11151 -2 - 1119 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) Maltose and Maltodextrin Utilization
fig|6666666.229932.peg.757 CDS AEJN02000044.1 12300 12413 3 + 114 hypothetical protein - none -
fig|6666666.229932.peg.758 CDS AEJN02000044.1 12725 13915 2 + 1191 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Alpha-Amylase locus in Streptocococcus;
Bacterial Chemotaxis;
Maltose and Maltodextrin Utilization
fig|6666666.229932.peg.759 CDS AEJN02000044.1 13884 14015 3 + 132 hypothetical protein - none -
fig|6666666.229932.peg.760 CDS AEJN02000044.1 14039 15577 2 + 1539 Maltose/maltodextrin ABC transporter, permease protein MalF Maltose and Maltodextrin Utilization
fig|6666666.229932.peg.761 CDS AEJN02000044.1 15599 16489 2 + 891 Maltose/maltodextrin ABC transporter, permease protein MalG Maltose and Maltodextrin Utilization
fig|6666666.229932.peg.762 CDS AEJN02000044.1 16583 18634 2 + 2052 Periplasmic alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229932.peg.763 CDS AEJN02000044.1 18619 18735 1 + 117 hypothetical protein - none -
fig|6666666.229932.peg.764 CDS AEJN02000044.1 19734 18694 -3 - 1041 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) Cysteine Biosynthesis;
Uptake of selenate and selenite
fig|6666666.229932.peg.765 CDS AEJN02000044.1 21748 19718 -1 - 2031 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229932.peg.766 CDS AEJN02000044.1 22828 21800 -1 - 1029 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229932.peg.767 CDS AEJN02000044.1 23000 22839 -2 - 162 hypothetical protein - none -
fig|6666666.229932.peg.768 CDS AEJN02000044.1 23102 24574 2 + 1473 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System
fig|6666666.229932.peg.769 CDS AEJN02000044.1 24877 27147 1 + 2271 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229932.peg.770 CDS AEJN02000044.1 27182 27928 2 + 747 hypothetical protein - none -
fig|6666666.229932.peg.771 CDS AEJN02000044.1 28241 29194 2 + 954 hypothetical protein - none -
fig|6666666.229932.peg.772 CDS AEJN02000044.1 29215 30345 1 + 1131 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229932.peg.773 CDS AEJN02000044.1 30367 30636 1 + 270 hypothetical protein - none -
fig|6666666.229932.peg.774 CDS AEJN02000044.1 30706 30954 1 + 249 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229932.peg.775 CDS AEJN02000044.1 31856 31044 -2 - 813 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229932.peg.776 CDS AEJN02000044.1 32501 31878 -2 - 624 L-lysine permease - none -
fig|6666666.229932.peg.777 CDS AEJN02000044.1 33001 32510 -1 - 492 Phosphatidylglycerophosphatase A (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229932.peg.778 CDS AEJN02000044.1 33994 33011 -1 - 984 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Riboflavin synthesis cluster;
Thiamin biosynthesis
fig|6666666.229932.peg.779 CDS AEJN02000044.1 34438 34013 -1 - 426 Transcription termination protein NusB Riboflavin synthesis cluster;
Transcription factors bacterial
fig|6666666.229932.peg.780 CDS AEJN02000044.1 34918 34445 -1 - 474 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229932.peg.781 CDS AEJN02000045.1 881 66 -2 - 816 Peptide transport system ATP-binding protein SapF Peptide ABC transport system Sap
fig|6666666.229932.peg.782 CDS AEJN02000045.1 1937 885 -2 - 1053 Peptide transport system ATP-binding protein SapD Peptide ABC transport system Sap
fig|6666666.229932.peg.783 CDS AEJN02000045.1 2832 1945 -3 - 888 Peptide transport system permease protein SapC Peptide ABC transport system Sap
fig|6666666.229932.peg.784 CDS AEJN02000045.1 3787 2822 -1 - 966 Peptide transport system permease protein SapB Peptide ABC transport system Sap
fig|6666666.229932.peg.785 CDS AEJN02000045.1 5418 3787 -3 - 1632 Peptide transport periplasmic protein SapA Peptide ABC transport system Sap
fig|6666666.229932.peg.786 CDS AEJN02000045.1 5684 7099 2 + 1416 Conserved protein YcjX with nucleoside triphosphate hydrolase domain A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229932.peg.787 CDS AEJN02000045.1 7112 8191 2 + 1080 Membrane protein YcjF A conserved operon linked to TyrR and possibly involved in virulence
fig|6666666.229932.peg.788 CDS AEJN02000045.1 8275 9234 1 + 960 Transcriptional repressor protein TyrR Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229932.peg.789 CDS AEJN02000045.1 9597 9289 -3 - 309 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229932.peg.790 CDS AEJN02000045.1 9908 9612 -2 - 297 RNA-binding protein Hfq Hfl operon;
Polyadenylation bacterial
fig|6666666.229932.peg.791 CDS AEJN02000045.1 10972 10028 -1 - 945 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229932.peg.792 CDS AEJN02000045.1 12837 10987 -3 - 1851 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229932.peg.793 CDS AEJN02000045.1 14324 12837 -2 - 1488 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229932.peg.794 CDS AEJN02000045.1 14815 14321 -1 - 495 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
YjeE;
YrdC-YciO-Sua5 protein family
fig|6666666.229932.peg.795 CDS AEJN02000045.1 14790 14918 3 + 129 hypothetical protein - none -
fig|6666666.229932.peg.796 CDS AEJN02000045.1 16764 14971 -3 - 1794 Mlr4739 protein - none -
fig|6666666.229932.peg.797 CDS AEJN02000045.1 18028 17120 -1 - 909 RfbJ protein - none -
fig|6666666.229932.peg.798 CDS AEJN02000045.1 19548 18040 -3 - 1509 conserved domain protein - none -
fig|6666666.229932.peg.799 CDS AEJN02000045.1 20152 19535 -1 - 618 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229932.peg.800 CDS AEJN02000045.1 21695 20181 -2 - 1515 Dca - none -
fig|6666666.229932.peg.801 CDS AEJN02000045.1 23029 22208 -1 - 822 probable phage integrase - none -
fig|6666666.229932.peg.802 CDS AEJN02000045.1 24366 23113 -3 - 1254 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229932.peg.803 CDS AEJN02000045.1 25033 24443 -1 - 591 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - none -
fig|6666666.229932.peg.804 CDS AEJN02000045.1 25327 25506 1 + 180 Haemophilus-specific protein, uncharacterized - none -
fig|6666666.229932.peg.805 CDS AEJN02000045.1 25820 25999 2 + 180 hypothetical protein - none -
fig|6666666.229932.peg.806 CDS AEJN02000045.1 26569 26823 1 + 255 hypothetical protein - none -
fig|6666666.229932.peg.807 CDS AEJN02000045.1 26826 27170 3 + 345 Programmed cell death toxin MazF - none -
fig|6666666.229932.peg.808 CDS AEJN02000045.1 27735 28403 3 + 669 Cytolethal distending toxin subunit A Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229932.peg.809 CDS AEJN02000045.1 28418 29269 2 + 852 Cytolethal distending toxin subunit B Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229932.peg.810 CDS AEJN02000045.1 29280 29840 3 + 561 Cytolethal distending toxin subunit C Cytolethal distending toxin of Campylobacter jejuni;
Cytolethal distending toxins
fig|6666666.229932.peg.811 CDS AEJN02000045.1 31208 30447 -2 - 762 DUF1526 domain-containing protein - none -
fig|6666666.229932.peg.812 CDS AEJN02000045.1 31910 32023 2 + 114 hypothetical protein - none -
fig|6666666.229932.peg.813 CDS AEJN02000045.1 32258 32581 2 + 324 FIG00696053: hypothetical protein - none -
fig|6666666.229932.peg.814 CDS AEJN02000045.1 32581 32820 1 + 240 hypothetical protein - none -
fig|6666666.229932.peg.815 CDS AEJN02000045.1 32837 33244 2 + 408 FIG00696269: hypothetical protein - none -
fig|6666666.229932.peg.816 CDS AEJN02000045.1 33263 33634 2 + 372 FIG00696467: hypothetical protein - none -
fig|6666666.229932.peg.817 CDS AEJN02000045.1 33646 34278 1 + 633 Possible exported protein - none -
fig|6666666.229932.peg.818 CDS AEJN02000045.1 34278 35138 3 + 861 FIG00698030: hypothetical protein - none -
fig|6666666.229932.peg.819 CDS AEJN02000045.1 35149 36537 1 + 1389 putative exported protein - none -
fig|6666666.229932.peg.820 CDS AEJN02000045.1 36546 36953 3 + 408 putative lipoprotein - none -
fig|6666666.229932.peg.821 CDS AEJN02000045.1 37790 37242 -2 - 549 3@1-to-5@1 oligoribonuclease (orn) RNA processing and degradation, bacterial
fig|6666666.229932.peg.822 CDS AEJN02000045.1 37862 38902 2 + 1041 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229932.peg.823 CDS AEJN02000045.1 39123 39380 3 + 258 Phosphotransferase system, phosphocarrier protein HPr Fructose utilization;
Mannitol Utilization
fig|6666666.229932.peg.824 CDS AEJN02000045.1 39497 41224 2 + 1728 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) Fructose utilization;
Mannitol Utilization
fig|6666666.229932.peg.825 CDS AEJN02000045.1 41285 41785 2 + 501 PTS system, glucose-specific IIA component - none -
fig|6666666.229932.peg.826 CDS AEJN02000045.1 42099 41911 -3 - 189 Oligopeptidase A (EC 3.4.24.70) Protein degradation
fig|6666666.229932.peg.827 CDS AEJN02000045.1 44082 44447 3 + 366 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229932.peg.828 CDS AEJN02000045.1 44503 46041 1 + 1539 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) ABC transporter oligopeptide (TC 3.A.1.5.1)
fig|6666666.229932.peg.829 CDS AEJN02000045.1 46431 46312 -3 - 120 hypothetical protein - none -
fig|6666666.229932.peg.830 CDS AEJN02000045.1 46661 46476 -2 - 186 hypothetical protein - none -
fig|6666666.229932.peg.831 CDS AEJN02000046.1 151 1983 1 + 1833 Glutathione-regulated potassium-efflux system ATP-binding protein Potassium homeostasis
fig|6666666.229932.peg.832 CDS AEJN02000046.1 2131 3189 1 + 1059 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229932.peg.833 CDS AEJN02000046.1 3271 3729 1 + 459 Regulatory protein RecX DNA repair system including RecA, MutS and a hypothetical protein;
RecA and RecX
fig|6666666.229932.peg.834 CDS AEJN02000046.1 3802 4191 1 + 390 Endoribonuclease L-PSP - none -
fig|6666666.229932.peg.835 CDS AEJN02000046.1 6371 4260 -2 - 2112 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229932.peg.836 CDS AEJN02000046.1 7343 6390 -2 - 954 Transaldolase (EC 2.2.1.2) Fructose utilization;
Pentose phosphate pathway
fig|6666666.229932.peg.837 CDS AEJN02000047.1 94 327 1 + 234 Mobile element protein - none -
fig|6666666.229932.peg.838 CDS AEJN02000047.1 543 1148 3 + 606 Mobile element protein - none -
fig|6666666.229932.peg.839 CDS AEJN02000048.1 1605 187 -3 - 1419 Outer membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229932.peg.840 CDS AEJN02000048.1 2752 1625 -1 - 1128 ABC-type multidrug transport system, permease component - none -
fig|6666666.229932.peg.841 CDS AEJN02000048.1 5498 2754 -2 - 2745 ABC-type multidrug transport system, permease component - none -
fig|6666666.229932.peg.842 CDS AEJN02000048.1 6481 5501 -1 - 981 HlyD family secretion protein - none -
fig|6666666.229932.peg.843 CDS AEJN02000048.1 6629 7192 2 + 564 Transcriptional regulator, TetR family - none -
fig|6666666.229932.peg.844 CDS AEJN02000048.1 8433 7243 -3 - 1191 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229932.peg.845 CDS AEJN02000048.1 8855 11464 2 + 2610 Membrane alanine aminopeptidase N (EC 3.4.11.2) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229932.peg.846 CDS AEJN02000048.1 11536 12555 1 + 1020 Dihydroorotate dehydrogenase (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229932.peg.847 CDS AEJN02000048.1 12569 13405 2 + 837 COG0613, Predicted metal-dependent phosphoesterases (PHP family) YrdC-YciO-Sua5 protein family;
tRNA modification Bacteria
fig|6666666.229932.peg.848 CDS AEJN02000048.1 15148 16173 1 + 1026 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229932.peg.849 CDS AEJN02000048.1 17094 16258 -3 - 837 ABC-type Co2+ transport system, periplasmic component - none -
fig|6666666.229932.peg.850 CDS AEJN02000048.1 18153 17221 -3 - 933 Universal stress protein E Universal stress protein family
fig|6666666.229932.peg.851 CDS AEJN02000048.1 19044 18271 -3 - 774 Fumarate and nitrate reduction regulatory protein Oxidative stress
fig|6666666.229932.peg.852 CDS AEJN02000048.1 19153 19323 1 + 171 hypothetical protein - none -
fig|6666666.229932.peg.853 CDS AEJN02000048.1 19882 19385 -1 - 498 Ferritin-like protein 2 - none -
fig|6666666.229932.peg.854 CDS AEJN02000048.1 20383 19898 -1 - 486 Ferritin-like protein 2 - none -
fig|6666666.229932.peg.855 CDS AEJN02000049.1 1338 169 -3 - 1170 hypothetical protein - none -
fig|6666666.229932.peg.856 CDS AEJN02000050.1 65 547 2 + 483 hypothetical protein - none -
fig|6666666.229932.peg.857 CDS AEJN02000050.1 721 924 1 + 204 hypothetical protein - none -
fig|6666666.229932.peg.858 CDS AEJN02000051.1 2398 125 -1 - 2274 Glutathione biosynthesis bifunctional protein gshF (EC 6.3.2.2)(EC 6.3.2.3) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229932.peg.859 CDS AEJN02000051.1 2630 4231 2 + 1602 Dca - none -
fig|6666666.229932.peg.860 CDS AEJN02000051.1 4341 4195 -3 - 147 hypothetical protein - none -
fig|6666666.229932.peg.861 CDS AEJN02000051.1 4490 5056 2 + 567 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229932.peg.862 CDS AEJN02000051.1 5066 6298 2 + 1233 ATP-dependent Clp protease ATP-binding subunit ClpX Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229932.peg.863 CDS AEJN02000051.1 6684 6361 -3 - 324 FIG074102: hypothetical protein - none -
fig|6666666.229932.peg.864 CDS AEJN02000051.1 6877 6677 -1 - 201 Phage-related protein - none -
fig|6666666.229932.peg.865 CDS AEJN02000051.1 7988 7209 -2 - 780 membrane protein, putative - none -
fig|6666666.229932.peg.866 CDS AEJN02000051.1 10220 8061 -2 - 2160 Copper-translocating P-type ATPase (EC 3.6.3.4) Copper Transport System;
Copper homeostasis
fig|6666666.229932.peg.867 CDS AEJN02000051.1 10519 10307 -1 - 213 Copper chaperone Copper homeostasis
fig|6666666.229932.peg.868 CDS AEJN02000051.1 10778 10999 2 + 222 Cu(I)-responsive transcriptional regulator Copper homeostasis
fig|6666666.229932.peg.869 CDS AEJN02000051.1 11060 11275 2 + 216 Mobile element protein - none -
fig|6666666.229932.peg.870 CDS AEJN02000051.1 11568 11816 3 + 249 Mobile element protein - none -
fig|6666666.229932.peg.871 CDS AEJN02000051.1 12263 12484 2 + 222 probable transcription regulator - none -
fig|6666666.229932.peg.872 CDS AEJN02000051.1 17001 12733 -3 - 4269 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229932.peg.873 CDS AEJN02000051.1 21132 17104 -3 - 4029 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229932.peg.874 CDS AEJN02000051.1 21774 21403 -3 - 372 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster
fig|6666666.229932.peg.875 CDS AEJN02000051.1 22317 21826 -3 - 492 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster
fig|6666666.229932.peg.876 CDS AEJN02000051.1 22658 22488 -2 - 171 hypothetical protein - none -
fig|6666666.229932.peg.877 CDS AEJN02000051.1 23362 22673 -1 - 690 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster
fig|6666666.229932.peg.878 CDS AEJN02000051.1 23795 23367 -2 - 429 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster
fig|6666666.229932.peg.879 CDS AEJN02000051.1 24502 23951 -1 - 552 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229932.peg.880 CDS AEJN02000051.1 24914 24504 -2 - 411 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229932.peg.881 CDS AEJN02000051.1 26057 25380 -2 - 678 hypothetical protein - none -
fig|6666666.229932.peg.882 CDS AEJN02000051.1 26371 26117 -1 - 255 Mobile element protein - none -
fig|6666666.229932.peg.883 CDS AEJN02000051.1 26981 26700 -2 - 282 hypothetical protein - none -
fig|6666666.229932.peg.884 CDS AEJN02000052.1 65 541 2 + 477 hypothetical protein - none -
fig|6666666.229932.peg.885 CDS AEJN02000052.1 691 3414 1 + 2724 hypothetical protein - none -
fig|6666666.229932.peg.886 CDS AEJN02000052.1 3858 4415 3 + 558 hypothetical protein - none -
fig|6666666.229932.peg.887 CDS AEJN02000052.1 6156 4747 -3 - 1410 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229932.peg.888 CDS AEJN02000052.1 6226 6738 1 + 513 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Queuosine-Archaeosine Biosynthesis
fig|6666666.229932.peg.889 CDS AEJN02000052.1 6832 6987 1 + 156 hypothetical protein - none -
fig|6666666.229932.peg.890 CDS AEJN02000052.1 6980 7261 2 + 282 hypothetical protein - none -
fig|6666666.229932.peg.891 CDS AEJN02000052.1 7264 8052 1 + 789 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229932.peg.892 CDS AEJN02000052.1 8546 8079 -2 - 468 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229932.peg.893 CDS AEJN02000052.1 8967 8848 -3 - 120 hypothetical protein - none -
fig|6666666.229932.peg.894 CDS AEJN02000052.1 9399 9148 -3 - 252 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229932.peg.895 CDS AEJN02000052.1 17689 17573 -1 - 117 hypothetical protein - none -
fig|6666666.229932.peg.896 CDS AEJN02000052.1 19493 17706 -2 - 1788 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229932.peg.897 CDS AEJN02000052.1 19727 19548 -2 - 180 hypothetical protein - none -
fig|6666666.229932.peg.898 CDS AEJN02000052.1 19692 23168 3 + 3477 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229932.peg.899 CDS AEJN02000052.1 24427 23243 -1 - 1185 hypothetical protein - none -
fig|6666666.229932.peg.900 CDS AEJN02000052.1 26640 24406 -3 - 2235 hypothetical protein - none -
fig|6666666.229932.peg.901 CDS AEJN02000052.1 27943 26633 -1 - 1311 hypothetical protein - none -
fig|6666666.229932.peg.902 CDS AEJN02000053.1 1398 823 -3 - 576 unknown - none -
fig|6666666.229932.peg.903 CDS AEJN02000053.1 1585 1385 -1 - 201 hypothetical protein - none -
fig|6666666.229932.peg.904 CDS AEJN02000053.1 1917 1585 -3 - 333 hypothetical protein - none -
fig|6666666.229932.peg.905 CDS AEJN02000053.1 2734 1910 -1 - 825 FIG00698594: hypothetical protein - none -
fig|6666666.229932.peg.906 CDS AEJN02000053.1 3117 3260 3 + 144 hypothetical protein - none -
fig|6666666.229932.peg.907 CDS AEJN02000053.1 4191 3688 -3 - 504 hypothetical protein - none -
fig|6666666.229932.peg.908 CDS AEJN02000053.1 5362 4265 -1 - 1098 FIG00904318: hypothetical protein - none -
fig|6666666.229932.peg.909 CDS AEJN02000053.1 5822 5448 -2 - 375 hypothetical protein - none -
fig|6666666.229932.peg.910 CDS AEJN02000053.1 6044 5832 -2 - 213 FIG00696418: hypothetical protein - none -
fig|6666666.229932.peg.911 CDS AEJN02000053.1 6367 6041 -1 - 327 hypothetical protein - none -
fig|6666666.229932.peg.912 CDS AEJN02000053.1 6643 6395 -1 - 249 hypothetical protein - none -
fig|6666666.229932.peg.913 CDS AEJN02000053.1 6863 6654 -2 - 210 possible prophage CP4-57 regulatory protein - none -
fig|6666666.229932.peg.914 CDS AEJN02000053.1 7884 7048 -3 - 837 hypothetical protein - none -
fig|6666666.229932.peg.915 CDS AEJN02000053.1 9134 8067 -2 - 1068 Integrase - none -
fig|6666666.229932.peg.916 CDS AEJN02000053.1 10404 10177 -3 - 228 FIG00354920: hypothetical protein - none -
fig|6666666.229932.peg.917 CDS AEJN02000053.1 13052 10401 -2 - 2652 Putative uncharacterized protein ydbH - none -
fig|6666666.229932.peg.918 CDS AEJN02000054.1 56 565 2 + 510 Mobile element protein - none -
fig|6666666.229932.peg.919 CDS AEJN02000055.1 2132 63 -2 - 2070 Hypothetical SecA-related protein - none -
fig|6666666.229932.peg.920 CDS AEJN02000055.1 2299 2487 1 + 189 hypothetical protein - none -
fig|6666666.229932.peg.921 CDS AEJN02000055.1 3999 2884 -3 - 1116 Membrane fusion protein of RND family multidrug efflux pump Multidrug Resistance Efflux Pumps
fig|6666666.229932.peg.922 CDS AEJN02000055.1 4147 4590 1 + 444 Transcriptional regulator, MarR family - none -
fig|6666666.229932.peg.923 CDS AEJN02000055.1 4590 4892 3 + 303 probable integral membrane protein NMA1777 - none -
fig|6666666.229932.peg.924 CDS AEJN02000055.1 4943 5470 2 + 528 probable integral membrane protein NMA1777 - none -
fig|6666666.229932.peg.925 CDS AEJN02000055.1 6563 5709 -2 - 855 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) DNA repair, bacterial
fig|6666666.229932.peg.926 CDS AEJN02000055.1 7654 6566 -1 - 1089 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Type IV pilus
fig|6666666.229932.peg.927 CDS AEJN02000055.1 8205 7678 -3 - 528 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229932.peg.928 CDS AEJN02000055.1 9828 8419 -3 - 1410 Type IV pilus biogenesis protein PilQ; Competence protein E DNA uptake cluster;
Type IV pilus
fig|6666666.229932.peg.929 CDS AEJN02000055.1 10241 9849 -2 - 393 Type IV pilus biogenesis protein PilQ; Competence protein D DNA uptake cluster;
Type IV pilus
fig|6666666.229932.peg.930 CDS AEJN02000055.1 10765 10241 -1 - 525 Competence protein C; Chromosome segregation ATPases DNA uptake cluster
fig|6666666.229932.peg.931 CDS AEJN02000055.1 11280 10762 -3 - 519 Type IV pilus biogenesis protein PilN; Competence protein B DNA uptake cluster;
Type IV pilus
fig|6666666.229932.peg.932 CDS AEJN02000055.1 12100 11291 -1 - 810 Type IV pilus biogenesis protein PilM; Competence protein A DNA uptake cluster;
Type IV pilus
fig|6666666.229932.peg.933 CDS AEJN02000055.1 12385 14709 1 + 2325 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229932.peg.934 CDS AEJN02000055.1 14805 15650 3 + 846 Protein involved in catabolism of external DNA DNA processing cluster;
DNA uptake cluster
fig|6666666.229932.peg.935 CDS AEJN02000055.1 15745 17115 1 + 1371 Glutathione reductase (EC 1.8.1.7) Glutathione: Redox cycle
fig|6666666.229932.peg.936 CDS AEJN02000055.1 17892 17248 -3 - 645 Cyclic AMP receptor protein cAMP signaling in bacteria
fig|6666666.229932.peg.937 CDS AEJN02000055.1 18148 17930 -1 - 219 FIG00696234: hypothetical protein - none -
fig|6666666.229932.peg.938 CDS AEJN02000055.1 18771 18172 -3 - 600 Transcriptional regulator SlmA, TetR family - none -
fig|6666666.229932.peg.939 CDS AEJN02000055.1 19226 18771 -2 - 456 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229932.peg.940 CDS AEJN02000055.1 20494 19295 -1 - 1200 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229932.peg.941 CDS AEJN02000055.1 20469 20621 3 + 153 hypothetical protein - none -
fig|6666666.229932.peg.942 CDS AEJN02000055.1 20672 21331 2 + 660 DNA repair protein RadC DNA repair, bacterial
fig|6666666.229932.peg.943 CDS AEJN02000055.1 21603 21776 3 + 174 LSU ribosomal protein L28p - none -
fig|6666666.229932.peg.944 CDS AEJN02000055.1 21788 21958 2 + 171 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent - none -
fig|6666666.229932.peg.945 CDS AEJN02000055.1 22395 22853 3 + 459 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) DNA Repair Base Excision
fig|6666666.229932.peg.946 CDS AEJN02000055.1 23908 22856 -1 - 1053 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229932.peg.947 CDS AEJN02000055.1 24940 23918 -1 - 1023 COG0859: ADP-heptose:LPS heptosyltransferase - none -
fig|6666666.229932.peg.948 CDS AEJN02000055.1 25633 24941 -1 - 693 Beta-1,4-galactosyltransferase LOS core oligosaccharide biosynthesis
fig|6666666.229932.peg.949 CDS AEJN02000055.1 25908 25696 -3 - 213 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent - none -
fig|6666666.229932.peg.950 CDS AEJN02000055.1 26166 27014 3 + 849 Lipooligosaccharide biosynthesis protein lex-1 (EC 2.-.-.-) - none -
fig|6666666.229932.peg.951 CDS AEJN02000055.1 27023 28027 2 + 1005 putative capsular polysaccharide synthesis protein - none -
fig|6666666.229932.peg.952 CDS AEJN02000055.1 28897 28034 -1 - 864 Involved in lipopolysaccharide biosynthesis - none -
fig|6666666.229932.peg.953 CDS AEJN02000055.1 29081 31321 2 + 2241 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229932.peg.954 CDS AEJN02000055.1 31431 32243 3 + 813 Cell division protein - none -
fig|6666666.229932.peg.955 CDS AEJN02000055.1 32443 33009 1 + 567 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229932.peg.956 CDS AEJN02000055.1 33035 34231 2 + 1197 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229932.peg.957 CDS AEJN02000055.1 34245 37343 3 + 3099 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229932.peg.958 CDS AEJN02000055.1 37458 37333 -3 - 126 hypothetical protein - none -
fig|6666666.229932.peg.959 CDS AEJN02000055.1 37497 38297 3 + 801 Orf2 - none -
fig|6666666.229932.peg.960 CDS AEJN02000055.1 38683 38327 -1 - 357 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Riboflavin synthesis cluster
fig|6666666.229932.peg.961 CDS AEJN02000055.1 40940 38709 -2 - 2232 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229932.peg.962 CDS AEJN02000055.1 42266 40950 -2 - 1317 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) RNA methylation
fig|6666666.229932.peg.963 CDS AEJN02000055.1 42954 42268 -3 - 687 DNA recombination and repair protein RecO CBSS-176299.4.peg.1292;
DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229932.peg.964 CDS AEJN02000055.1 43206 43027 -3 - 180 hypothetical protein - none -
fig|6666666.229932.peg.965 CDS AEJN02000055.1 44188 43340 -1 - 849 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229932.peg.966 CDS AEJN02000055.1 44294 44181 -2 - 114 hypothetical protein - none -
fig|6666666.229932.peg.967 CDS AEJN02000055.1 45065 44343 -2 - 723 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229932.peg.968 CDS AEJN02000055.1 45529 45140 -1 - 390 Patatin-like phospholipase - none -
fig|6666666.229932.peg.969 CDS AEJN02000055.1 46535 45648 -2 - 888 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress - none -
fig|6666666.229932.peg.970 CDS AEJN02000055.1 47426 46563 -2 - 864 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229932.peg.971 CDS AEJN02000055.1 47544 48260 3 + 717 Ribonuclease PH (EC 2.7.7.56) Heat shock dnaK gene cluster extended;
tRNA processing
fig|6666666.229932.peg.972 CDS AEJN02000055.1 48270 48914 3 + 645 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229932.peg.973 CDS AEJN02000055.1 48996 49871 3 + 876 DnaJ-like protein DjlA - none -
fig|6666666.229932.peg.974 CDS AEJN02000055.1 49875 50843 3 + 969 tRNA-dihydrouridine synthase C (EC 1.-.-.-) Murein hydrolase regulation and cell death;
tRNA modification Bacteria
fig|6666666.229932.peg.975 CDS AEJN02000055.1 51922 50864 -1 - 1059 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229932.peg.976 CDS AEJN02000055.1 53458 51938 -1 - 1521 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229932.peg.977 CDS AEJN02000055.1 54537 53539 -3 - 999 Ferric iron ABC transporter, iron-binding protein Iron acquisition in Streptococcus
fig|6666666.229932.peg.978 CDS AEJN02000055.1 55097 54756 -2 - 342 FIG002060: uncharacterized protein YggL CBSS-83333.1.peg.2911
fig|6666666.229932.peg.979 CDS AEJN02000055.1 55894 55127 -1 - 768 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) CBSS-83333.1.peg.2911;
RNA methylation;
tRNA modification Bacteria
fig|6666666.229932.peg.980 CDS AEJN02000055.1 55992 57182 3 + 1191 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229932.peg.981 CDS AEJN02000055.1 57228 57506 3 + 279 FIG001341: Probable Fe(2+)-trafficking protein YggX Heat shock dnaK gene cluster extended
fig|6666666.229932.peg.982 CDS AEJN02000055.1 57509 58588 2 + 1080 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229932.peg.983 CDS AEJN02000055.1 59681 59088 -2 - 594 Hypothetical lipoprotein YajG precursor CBSS-339671.5.peg.589
fig|6666666.229932.peg.984 CDS AEJN02000055.1 59785 60096 1 + 312 Cell division protein BolA Bacterial Cell Division;
CBSS-339671.5.peg.589
fig|6666666.229932.peg.985 CDS AEJN02000055.1 60106 60222 1 + 117 hypothetical protein - none -
fig|6666666.229932.peg.986 CDS AEJN02000055.1 60260 60427 2 + 168 hypothetical protein - none -
fig|6666666.229932.peg.987 CDS AEJN02000055.1 60452 61792 2 + 1341 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.988 CDS AEJN02000055.1 61795 63030 1 + 1236 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.989 CDS AEJN02000055.1 63023 63808 2 + 786 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.990 CDS AEJN02000055.1 63808 64437 1 + 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.991 CDS AEJN02000055.1 64441 65037 1 + 597 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.992 CDS AEJN02000055.1 65049 66284 3 + 1236 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.993 CDS AEJN02000055.1 66289 66438 1 + 150 hypothetical protein - none -
fig|6666666.229932.peg.994 CDS AEJN02000055.1 66435 67523 3 + 1089 Thiamin biosynthesis lipoprotein ApbE - none -
fig|6666666.229932.peg.995 CDS AEJN02000055.1 67602 67859 3 + 258 Probable exported or periplasmic protein in ApbE locus Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.996 CDS AEJN02000055.1 68120 69271 2 + 1152 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229932.peg.997 CDS AEJN02000055.1 69502 69642 1 + 141 hypothetical protein - none -
fig|6666666.229932.peg.998 CDS AEJN02000055.1 69911 71221 2 + 1311 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Serine-glyoxylate cycle
fig|6666666.229932.peg.999 CDS AEJN02000055.1 71737 71318 -1 - 420 Putative Holliday junction resolvase YggF Cluster containing Alanyl-tRNA synthetase;
Cluster containing Glutathione synthetase
fig|6666666.229932.peg.1000 CDS AEJN02000055.1 72294 71737 -3 - 558 UPF0301 protein YqgE Cluster containing Glutathione synthetase
fig|6666666.229932.peg.1001 CDS AEJN02000055.1 73046 72312 -2 - 735 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Cluster containing Glutathione synthetase;
Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229932.peg.1002 CDS AEJN02000055.1 73450 73133 -1 - 318 Methionine repressor MetJ Methionine Biosynthesis
fig|6666666.229932.peg.1003 CDS AEJN02000055.1 74492 73605 -2 - 888 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) - none -
fig|6666666.229932.peg.1004 CDS AEJN02000055.1 75887 74568 -2 - 1320 Phosphomannomutase (EC 5.4.2.8) Mannose Metabolism
fig|6666666.229932.peg.1005 CDS AEJN02000055.1 76146 75964 -3 - 183 Carbon storage regulator Carbon Starvation;
Carbon storage regulator
fig|6666666.229932.peg.1006 CDS AEJN02000055.1 78893 76269 -2 - 2625 Alanyl-tRNA synthetase (EC 6.1.1.7) Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229932.peg.1007 CDS AEJN02000055.1 79518 79093 -3 - 426 Universal stress protein A Universal stress protein family
fig|6666666.229932.peg.1008 CDS AEJN02000055.1 79700 80494 2 + 795 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229932.peg.1009 CDS AEJN02000055.1 81581 80592 -2 - 990 Cytosine deaminase (EC 3.5.4.1) CBSS-326442.4.peg.1852;
Creatine and Creatinine Degradation;
pyrimidine conversions
fig|6666666.229932.peg.1010 CDS AEJN02000055.1 81567 81704 3 + 138 hypothetical protein - none -
fig|6666666.229932.peg.1011 CDS AEJN02000055.1 83580 81841 -3 - 1740 FIG001881: hydrolase of alkaline phosphatase superfamily CBSS-211586.1.peg.1979
fig|6666666.229932.peg.1012 CDS AEJN02000055.1 83842 83585 -1 - 258 FIG002927: hypothetical protein CBSS-211586.1.peg.1979
fig|6666666.229932.peg.1013 CDS AEJN02000055.1 83935 84960 1 + 1026 Nucleoid-associated protein NdpA CBSS-211586.1.peg.1979
fig|6666666.229932.peg.1014 CDS AEJN02000055.1 85026 85439 3 + 414 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex Lipopolysaccharide assembly
fig|6666666.229932.peg.1015 CDS AEJN02000055.1 85481 86176 2 + 696 Copper-sensing two-component system response regulator CpxR Orphan regulatory proteins
fig|6666666.229932.peg.1016 CDS AEJN02000055.1 86221 87609 1 + 1389 Copper sensory histidine kinase CpxA Orphan regulatory proteins
fig|6666666.229932.peg.1017 CDS AEJN02000055.1 88873 87665 -1 - 1209 Sodium/glutamate symport protein - none -
fig|6666666.229932.peg.1018 CDS AEJN02000055.1 89473 89039 -1 - 435 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229932.peg.1019 CDS AEJN02000055.1 90300 89470 -3 - 831 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229932.peg.1020 CDS AEJN02000055.1 90770 90297 -2 - 474 UPF0225 protein YchJ Broadly distributed proteins not in subsystems
fig|6666666.229932.peg.1021 CDS AEJN02000055.1 91441 90773 -1 - 669 Uncharacterized protein conserved in bacteria - none -
fig|6666666.229932.peg.1022 CDS AEJN02000055.1 91567 93066 1 + 1500 ATPase component BioM of energizing module of biotin ECF transporter Biotin biosynthesis;
Biotin synthesis cluster
fig|6666666.229932.peg.1023 CDS AEJN02000055.1 93404 94219 2 + 816 putative tetracenomycin polyketide synthesis O-methyltransferase - none -
fig|6666666.229932.peg.1024 CDS AEJN02000055.1 94754 94308 -2 - 447 Transcriptional regulator, LysR family - none -
fig|6666666.229932.peg.1025 CDS AEJN02000055.1 95200 94763 -1 - 438 Transcriptional regulator, LysR family - none -
fig|6666666.229932.peg.1026 CDS AEJN02000055.1 95383 96129 1 + 747 oxidoreductase of aldo/keto reductase family, subgroup 1 - none -
fig|6666666.229932.peg.1027 CDS AEJN02000055.1 96292 97272 1 + 981 Aldo-keto reductase - none -
fig|6666666.229932.peg.1028 CDS AEJN02000055.1 97498 99153 1 + 1656 Carboxylesterase type B - none -
fig|6666666.229932.peg.1029 CDS AEJN02000055.1 99290 100399 2 + 1110 Putative exported protein precursor - none -
fig|6666666.229932.peg.1030 CDS AEJN02000055.1 101428 100538 -1 - 891 Transcriptional regulator, LysR family - none -
fig|6666666.229932.peg.1031 CDS AEJN02000055.1 101528 102592 2 + 1065 FIG01220323: hypothetical protein - none -
fig|6666666.229932.peg.1032 CDS AEJN02000055.1 104576 102744 -2 - 1833 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229932.peg.1033 CDS AEJN02000055.1 105427 104630 -1 - 798 Transcriptional regulator of glmS gene, DeoR family - none -
fig|6666666.229932.peg.1034 CDS AEJN02000055.1 105825 105553 -3 - 273 DNA-binding protein HU-alpha DNA structural proteins, bacterial;
DNA uptake cluster
fig|6666666.229932.peg.1035 CDS AEJN02000055.1 106582 105992 -1 - 591 FIG01200173: hypothetical protein - none -
fig|6666666.229932.peg.1036 CDS AEJN02000055.1 107664 106600 -3 - 1065 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) Heme and Siroheme Biosynthesis
fig|6666666.229932.peg.1037 CDS AEJN02000055.1 108461 107661 -2 - 801 NADH pyrophosphatase (EC 3.6.1.22) DNA uptake cluster;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229932.peg.1038 CDS AEJN02000055.1 109242 108598 -3 - 645 converved hypothetical protein - none -
fig|6666666.229932.peg.1039 CDS AEJN02000055.1 109500 111116 3 + 1617 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) Pyruvate metabolism I: anaplerotic reactions, PEP;
Serine-glyoxylate cycle
fig|6666666.229932.peg.1040 CDS AEJN02000055.1 112728 111181 -3 - 1548 Exopolyphosphatase (EC 3.6.1.11) Phosphate metabolism;
Polyphosphate
fig|6666666.229932.peg.1041 CDS AEJN02000055.1 116603 112731 -2 - 3873 Uncharacterized protein YtfN Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229932.peg.1042 CDS AEJN02000055.1 118490 116631 -2 - 1860 Uncharacterized protein YtfM precursor Cluster Ytf and putative sugar transporter;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229932.peg.1043 CDS AEJN02000055.1 119187 118558 -3 - 630 Nitrate/nitrite response regulator protein - none -
fig|6666666.229932.peg.1044 CDS AEJN02000055.1 121698 119197 -3 - 2502 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229932.peg.1045 CDS AEJN02000055.1 121797 122780 3 + 984 Porphobilinogen deaminase (EC 2.5.1.61) Heme and Siroheme Biosynthesis
fig|6666666.229932.peg.1046 CDS AEJN02000055.1 122793 123539 3 + 747 Uroporphyrinogen-III synthase (EC 4.2.1.75) Heme and Siroheme Biosynthesis
fig|6666666.229932.peg.1047 CDS AEJN02000055.1 123568 124953 1 + 1386 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) Heme and Siroheme Biosynthesis
fig|6666666.229932.peg.1048 CDS AEJN02000055.1 124966 126216 1 + 1251 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) - none -
fig|6666666.229932.peg.1049 CDS AEJN02000055.1 126969 126283 -3 - 687 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229932.peg.1050 CDS AEJN02000055.1 127282 127563 1 + 282 hypothetical protein - none -
fig|6666666.229932.peg.1051 CDS AEJN02000055.1 127749 128336 3 + 588 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like - none -
fig|6666666.229932.peg.1052 CDS AEJN02000055.1 128351 128542 2 + 192 hypothetical protein - none -
fig|6666666.229932.peg.1053 CDS AEJN02000055.1 129107 128625 -2 - 483 Transcription elongation factor GreB CBSS-243265.1.peg.198;
Transcription factors bacterial
fig|6666666.229932.peg.1054 CDS AEJN02000055.1 129258 129452 3 + 195 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229932.peg.1055 CDS AEJN02000055.1 130440 129841 -3 - 600 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229932.peg.1056 CDS AEJN02000055.1 131921 130452 -2 - 1470 Sodium-dependent transporter - none -
fig|6666666.229932.peg.1057 CDS AEJN02000055.1 132031 132918 1 + 888 RuBisCO operon transcriptional regulator CO2 uptake, carboxysome
fig|6666666.229932.peg.1058 CDS AEJN02000056.1 1862 396 -2 - 1467 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229932.peg.1059 CDS AEJN02000056.1 3241 2111 -1 - 1131 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase Sialic Acid Metabolism
fig|6666666.229932.peg.1060 CDS AEJN02000056.1 5229 3379 -3 - 1851 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter / TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229932.peg.1061 CDS AEJN02000056.1 6279 5293 -3 - 987 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Sialic Acid Metabolism
fig|6666666.229932.peg.1062 CDS AEJN02000056.1 6521 7222 2 + 702 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) Sialic Acid Metabolism
fig|6666666.229932.peg.1063 CDS AEJN02000056.1 7236 8123 3 + 888 N-acetylmannosamine kinase (EC 2.7.1.60) Sialic Acid Metabolism
fig|6666666.229932.peg.1064 CDS AEJN02000056.1 8133 9002 3 + 870 Sialic acid utilization regulator, RpiR family Sialic Acid Metabolism
fig|6666666.229932.peg.1065 CDS AEJN02000056.1 9012 9890 3 + 879 N-acetylneuraminate lyase (EC 4.1.3.3) Sialic Acid Metabolism
fig|6666666.229932.peg.1066 CDS AEJN02000056.1 10045 10848 1 + 804 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229932.peg.1067 CDS AEJN02000056.1 10904 12049 2 + 1146 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization;
Sialic Acid Metabolism
fig|6666666.229932.peg.1068 CDS AEJN02000056.1 12149 12262 2 + 114 hypothetical protein - none -
fig|6666666.229932.peg.1069 CDS AEJN02000056.1 12754 12254 -1 - 501 Thiol peroxidase, Tpx-type (EC 1.11.1.15) CBSS-257314.1.peg.752;
Thioredoxin-disulfide reductase
fig|6666666.229932.peg.1070 CDS AEJN02000056.1 13859 12795 -2 - 1065 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) Heme and Siroheme Biosynthesis
fig|6666666.229932.peg.1071 CDS AEJN02000056.1 14274 13852 -3 - 423 FIG017415: ydiI hotdog fold superfamily - none -
fig|6666666.229932.peg.1072 CDS AEJN02000056.1 15054 14410 -3 - 645 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229932.peg.1073 CDS AEJN02000056.1 17337 15085 -3 - 2253 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Glycolate, glyoxylate interconversions
fig|6666666.229932.peg.1074 CDS AEJN02000056.1 17822 18862 2 + 1041 Outer membrane protein A precursor Osmoregulation
fig|6666666.229932.peg.1075 CDS AEJN02000056.1 19180 19509 1 + 330 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229932.peg.1076 CDS AEJN02000056.1 19632 19519 -3 - 114 hypothetical protein - none -
fig|6666666.229932.peg.1077 CDS AEJN02000056.1 19634 20086 2 + 453 putative membrane protein - none -
fig|6666666.229932.peg.1078 CDS AEJN02000056.1 20087 20476 2 + 390 COG2363 - none -
fig|6666666.229932.peg.1079 CDS AEJN02000056.1 22162 24546 1 + 2385 HrpA-like helicases - none -
fig|6666666.229932.peg.1080 CDS AEJN02000056.1 25667 24633 -2 - 1035 ATPase domain protein - none -
fig|6666666.229932.peg.1081 CDS AEJN02000056.1 25819 26019 1 + 201 hypothetical protein - none -
fig|6666666.229932.peg.1082 CDS AEJN02000056.1 26662 25997 -1 - 666 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229932.peg.1083 CDS AEJN02000056.1 27174 26863 -3 - 312 Cytochrome C553 (soluble cytochrome f) Iron transport system including ABC transporter;
Soluble cytochromes and functionally related electron carriers
fig|6666666.229932.peg.1084 CDS AEJN02000056.1 27672 27181 -3 - 492 Possible periplasmic thiredoxin Iron transport system including ABC transporter
fig|6666666.229932.peg.1085 CDS AEJN02000056.1 28333 27662 -1 - 672 Fe2+ ABC transporter, ATP-binding subunit Iron transport system including ABC transporter
fig|6666666.229932.peg.1086 CDS AEJN02000056.1 29474 28335 -2 - 1140 Fe2+ ABC transporter, permease protein 2 Iron transport system including ABC transporter
fig|6666666.229932.peg.1087 CDS AEJN02000056.1 30786 29461 -3 - 1326 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229932.peg.1088 CDS AEJN02000056.1 32219 30789 -2 - 1431 Fe2+ ABC transporter, substrate binding protein Iron transport system including ABC transporter
fig|6666666.229932.peg.1089 CDS AEJN02000056.1 32878 32357 -1 - 522 Periplasmic protein p19 involved in high-affinity Fe2+ transport Iron transport system including ABC transporter
fig|6666666.229932.peg.1090 CDS AEJN02000056.1 34828 32921 -1 - 1908 High-affinity Fe2+/Pb2+ permease precursor Iron transport system including ABC transporter
fig|6666666.229932.peg.1091 CDS AEJN02000056.1 37520 35127 -2 - 2394 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229932.peg.1092 CDS AEJN02000056.1 37781 37566 -2 - 216 hypothetical protein - none -
fig|6666666.229932.peg.1093 CDS AEJN02000056.1 38124 37783 -3 - 342 probable iron binding protein from the HesB_IscA_SufA family - none -
fig|6666666.229932.peg.1094 CDS AEJN02000056.1 38258 39058 2 + 801 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229932.peg.1095 CDS AEJN02000056.1 39059 39199 2 + 141 hypothetical protein - none -
fig|6666666.229932.peg.1096 CDS AEJN02000057.1 886 1503 1 + 618 hypothetical protein - none -
fig|6666666.229932.peg.1097 CDS AEJN02000057.1 2071 2340 1 + 270 Putative sugar phosphotransferase component II B - none -
fig|6666666.229932.peg.1098 CDS AEJN02000057.1 2357 3712 2 + 1356 FIG00732228: membrane protein - none -
fig|6666666.229932.peg.1099 CDS AEJN02000057.1 3722 4546 2 + 825 Transketolase, N-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229932.peg.1100 CDS AEJN02000057.1 4536 5480 3 + 945 Transketolase, C-terminal section (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229932.peg.1101 CDS AEJN02000057.1 6597 5647 -3 - 951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p YrdC-YciO-Sua5 protein family
fig|6666666.229932.peg.1102 CDS AEJN02000057.1 6660 7166 3 + 507 FIG001674: hypothetical protein - none -
fig|6666666.229932.peg.1103 CDS AEJN02000057.1 9304 7163 -1 - 2142 Putative efflux (PET) family inner membrane protein YccS CBSS-83333.1.peg.946
fig|6666666.229932.peg.1104 CDS AEJN02000057.1 9786 9313 -3 - 474 Inner membrane protein YccF CBSS-83333.1.peg.946
fig|6666666.229932.peg.1105 CDS AEJN02000057.1 10244 9786 -2 - 459 Methylglyoxal synthase (EC 4.2.3.3) CBSS-83333.1.peg.946;
Methylglyoxal Metabolism
fig|6666666.229932.peg.1106 CDS AEJN02000057.1 10987 10307 -1 - 681 UPF0319 protein YccT precursor CBSS-83333.1.peg.946
fig|6666666.229932.peg.1107 CDS AEJN02000057.1 11132 11404 2 + 273 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229932.peg.1108 CDS AEJN02000057.1 12227 11379 -2 - 849 Manganese ABC transporter, inner membrane permease protein SitD - none -
fig|6666666.229932.peg.1109 CDS AEJN02000057.1 13081 12224 -1 - 858 Manganese ABC transporter, inner membrane permease protein SitC - none -
fig|6666666.229932.peg.1110 CDS AEJN02000057.1 13971 13081 -3 - 891 Manganese ABC transporter, ATP-binding protein SitB - none -
fig|6666666.229932.peg.1111 CDS AEJN02000057.1 14852 13971 -2 - 882 Manganese ABC transporter, periplasmic-binding protein SitA - none -
fig|6666666.229932.peg.1112 CDS AEJN02000057.1 15279 14950 -3 - 330 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) CBSS-326442.4.peg.1852;
Lipoic acid synthesis cluster;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes
fig|6666666.229932.peg.1113 CDS AEJN02000057.1 16027 15365 -1 - 663 Putative TEGT family carrier/transport protein CBSS-326442.4.peg.1852
fig|6666666.229932.peg.1114 CDS AEJN02000057.1 16343 16777 2 + 435 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229932.peg.1115 CDS AEJN02000057.1 16808 18595 2 + 1788 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229932.peg.1116 CDS AEJN02000057.1 18734 21610 2 + 2877 helicase (Snf2/Rad54 family) - none -
fig|6666666.229932.peg.1117 CDS AEJN02000057.1 22218 23159 3 + 942 FIG00807791: hypothetical protein - none -
fig|6666666.229932.peg.1118 CDS AEJN02000057.1 23173 24909 1 + 1737 Type III restriction-modification system methylation subunit (EC 2.1.1.72) Restriction-Modification System
fig|6666666.229932.peg.1119 CDS AEJN02000057.1 24909 25052 3 + 144 hypothetical protein - none -
fig|6666666.229932.peg.1120 CDS AEJN02000057.1 25036 26070 1 + 1035 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229932.peg.1121 CDS AEJN02000057.1 26116 28728 1 + 2613 Type III restriction-modification enzyme helicase subunit - none -
fig|6666666.229932.peg.1122 CDS AEJN02000057.1 28843 29517 1 + 675 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229932.peg.1123 CDS AEJN02000057.1 29514 31292 3 + 1779 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229932.peg.1124 CDS AEJN02000057.1 31305 32171 3 + 867 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229932.peg.1125 CDS AEJN02000057.1 32316 32966 3 + 651 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229932.peg.1126 CDS AEJN02000057.1 33032 33736 2 + 705 hypothetical protein - none -
fig|6666666.229932.peg.1127 CDS AEJN02000057.1 34060 34215 1 + 156 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229932.peg.1128 CDS AEJN02000057.1 34905 35285 3 + 381 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - none -
fig|6666666.229932.peg.1129 CDS AEJN02000057.1 35307 36311 3 + 1005 Thiamin ABC transporter, substrate-binding component Thiamin biosynthesis
fig|6666666.229932.peg.1130 CDS AEJN02000057.1 36320 37948 2 + 1629 Thiamin ABC transporter, transmembrane component Thiamin biosynthesis
fig|6666666.229932.peg.1131 CDS AEJN02000057.1 37932 38579 3 + 648 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ Thiamin biosynthesis
fig|6666666.229932.peg.1132 CDS AEJN02000057.1 38625 39629 3 + 1005 Biotin synthase (EC 2.8.1.6) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229932.peg.1133 CDS AEJN02000057.1 40231 40058 -1 - 174 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229932.peg.1134 CDS AEJN02000057.1 40345 40824 1 + 480 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229932.peg.1135 CDS AEJN02000057.1 40828 43572 1 + 2745 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases;
CBSS-83333.1.peg.876
fig|6666666.229932.peg.1136 CDS AEJN02000057.1 43638 44282 3 + 645 Outer membrane lipoprotein carrier protein LolA CBSS-83333.1.peg.876;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229932.peg.1137 CDS AEJN02000057.1 44295 45635 3 + 1341 FIG065221: Holliday junction DNA helicase CBSS-83333.1.peg.876
fig|6666666.229932.peg.1138 CDS AEJN02000057.1 47772 46132 -3 - 1641 C4-dicarboxylate transporter DcuB - none -
fig|6666666.229932.peg.1139 CDS AEJN02000057.1 48079 49395 1 + 1317 Seryl-tRNA synthetase (EC 6.1.1.11) CBSS-326442.4.peg.1852;
Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229932.peg.1140 CDS AEJN02000057.1 50371 49475 -1 - 897 Cytidine deaminase (EC 3.5.4.5) Murein hydrolase regulation and cell death;
pyrimidine conversions;
tRNA modification Bacteria
fig|6666666.229932.peg.1141 CDS AEJN02000057.1 51592 50495 -1 - 1098 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229932.peg.1142 CDS AEJN02000057.1 52496 51723 -2 - 774 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) Polyamine Metabolism
fig|6666666.229932.peg.1143 CDS AEJN02000057.1 52861 52496 -1 - 366 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229932.peg.1144 CDS AEJN02000057.1 54461 53343 -2 - 1119 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229932.peg.1145 CDS AEJN02000057.1 54725 55969 2 + 1245 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229932.peg.1146 CDS AEJN02000057.1 58701 56044 -3 - 2658 Paraquat-inducible protein B Oxidative stress
fig|6666666.229932.peg.1147 CDS AEJN02000057.1 59947 58664 -1 - 1284 Paraquat-inducible protein A Oxidative stress
fig|6666666.229932.peg.1148 CDS AEJN02000057.1 60165 60776 3 + 612 ProQ: influences osmotic activation of compatible solute ProP - none -
fig|6666666.229932.peg.1149 CDS AEJN02000057.1 60850 62907 1 + 2058 Tail-specific protease precursor (EC 3.4.21.102) - none -
fig|6666666.229932.peg.1150 CDS AEJN02000057.1 62985 64493 3 + 1509 L,D-transpeptidase YcbB CBSS-228400.4.peg.1623
fig|6666666.229932.peg.1151 CDS AEJN02000057.1 64672 65118 1 + 447 FIG001587: exported protein CBSS-228400.4.peg.1623
fig|6666666.229932.peg.1152 CDS AEJN02000057.1 65195 65833 2 + 639 Hypothetical metal-binding enzyme, YcbL homolog CBSS-228400.4.peg.1623
fig|6666666.229932.peg.1153 CDS AEJN02000057.1 66112 68919 1 + 2808 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229932.peg.1154 CDS AEJN02000057.1 69045 70268 3 + 1224 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Dehydrogenase complexes;
TCA Cycle
fig|6666666.229932.peg.1155 CDS AEJN02000057.1 70258 70410 1 + 153 hypothetical protein - none -
fig|6666666.229932.peg.1156 CDS AEJN02000057.1 70454 71623 2 + 1170 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229932.peg.1157 CDS AEJN02000057.1 71634 72506 3 + 873 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229932.peg.1158 CDS AEJN02000057.1 72539 73825 2 + 1287 hypothetical protein - none -
fig|6666666.229932.peg.1160 CDS AEJN02000057.1 77089 74867 -1 - 2223 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase
fig|6666666.229932.peg.1162 CDS AEJN02000057.1 78394 77222 -1 - 1173 cell filamentation protein Fic-related protein - none -
fig|6666666.229932.peg.1163 CDS AEJN02000057.1 78983 78522 -2 - 462 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) Hydrogenases
fig|6666666.229932.peg.1164 CDS AEJN02000057.1 79377 78973 -3 - 405 Formate hydrogenlyase transcriptional activator Formate hydrogenase
fig|6666666.229932.peg.1165 CDS AEJN02000057.1 80288 79512 -2 - 777 Formate hydrogenlyase subunit 7 Formate hydrogenase
fig|6666666.229932.peg.1166 CDS AEJN02000057.1 80932 80285 -1 - 648 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit Formate hydrogenase
fig|6666666.229932.peg.1167 CDS AEJN02000057.1 81602 80946 -2 - 657 Formate hydrogenlyase subunit 5 Formate hydrogenase
fig|6666666.229932.peg.1168 CDS AEJN02000057.1 84154 82616 -1 - 1539 Hydrogenase-4 component F - none -
fig|6666666.229932.peg.1169 CDS AEJN02000057.1 84797 84159 -2 - 639 Hydrogenase-4 component E (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229932.peg.1170 CDS AEJN02000057.1 86253 84808 -3 - 1446 Na(+) H(+) antiporter subunit A - none -
fig|6666666.229932.peg.1171 CDS AEJN02000057.1 87228 86266 -3 - 963 Hydrogenase-4 component C (EC 1.-.-.-) Formate hydrogenase
fig|6666666.229932.peg.1172 CDS AEJN02000057.1 89260 87239 -1 - 2022 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 Formate hydrogenase;
Formate hydrogenase
fig|6666666.229932.peg.1173 CDS AEJN02000057.1 89893 89294 -1 - 600 Hydrogenase-4 component A - none -
fig|6666666.229932.peg.1174 CDS AEJN02000057.1 90186 92471 3 + 2286 [NiFe] hydrogenase metallocenter assembly protein HypF G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229932.peg.1175 CDS AEJN02000057.1 92942 92826 -2 - 117 hypothetical protein - none -
fig|6666666.229932.peg.1176 CDS AEJN02000057.1 93812 93099 -2 - 714 Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) Anaerobic respiratory reductases;
Formate hydrogenase
fig|6666666.229932.peg.1177 CDS AEJN02000057.1 94635 93805 -3 - 831 Formate dehydrogenase O beta subunit (EC 1.2.1.2) Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229932.peg.1178 CDS AEJN02000057.1 97843 94733 -1 - 3111 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing Formate dehydrogenase;
Formate hydrogenase
fig|6666666.229932.peg.1179 CDS AEJN02000057.1 98064 98888 3 + 825 Formate dehydrogenase chain D (EC 1.2.1.2) Formate hydrogenase
fig|6666666.229932.peg.1180 CDS AEJN02000057.1 98937 99935 3 + 999 Gluconate utilization system Gnt-I transcriptional repressor D-gluconate and ketogluconates metabolism
fig|6666666.229932.peg.1181 CDS AEJN02000057.1 99886 100008 1 + 123 hypothetical protein - none -
fig|6666666.229932.peg.1182 CDS AEJN02000057.1 100523 100005 -2 - 519 Gluconokinase (EC 2.7.1.12) D-gluconate and ketogluconates metabolism;
Entner-Doudoroff Pathway
fig|6666666.229932.peg.1183 CDS AEJN02000057.1 100741 102090 1 + 1350 Low-affinity gluconate/H+ symporter GntU D-gluconate and ketogluconates metabolism
fig|6666666.229932.peg.1184 CDS AEJN02000057.1 102263 104437 2 + 2175 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229932.peg.1185 CDS AEJN02000057.1 105396 104569 -3 - 828 DNA ligase (ATP) (EC 6.5.1.1) DNA ligases
fig|6666666.229932.peg.1186 CDS AEJN02000057.1 106316 105573 -2 - 744 Probable transmembrane protein - none -
fig|6666666.229932.peg.1187 CDS AEJN02000057.1 106583 106329 -2 - 255 YoeB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.1188 CDS AEJN02000057.1 106831 106580 -1 - 252 YefM protein (antitoxin to YoeB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.1189 CDS AEJN02000057.1 107896 106940 -1 - 957 Polysaccharide polymerization protein - none -
fig|6666666.229932.peg.1190 CDS AEJN02000057.1 109416 107893 -3 - 1524 putative flippase - none -
fig|6666666.229932.peg.1191 CDS AEJN02000057.1 109547 110323 2 + 777 Lipopolysaccharide core biosynthesis glycosyltransferase WadA - none -
fig|6666666.229932.peg.1192 CDS AEJN02000057.1 110332 111522 1 + 1191 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229932.peg.1193 CDS AEJN02000057.1 111522 112403 3 + 882 Glycosyltransferase - none -
fig|6666666.229932.peg.1194 CDS AEJN02000057.1 112472 113281 2 + 810 Glucosyl-3-phosphoglycerate synthase (EC 2.4.1.266) - none -
fig|6666666.229932.peg.1195 CDS AEJN02000057.1 113283 114413 3 + 1131 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229932.peg.1196 CDS AEJN02000057.1 114483 115550 3 + 1068 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229932.peg.1197 CDS AEJN02000057.1 115724 116500 2 + 777 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229932.peg.1198 CDS AEJN02000057.1 116501 117379 2 + 879 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229932.peg.1199 CDS AEJN02000057.1 117382 117921 1 + 540 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Capsular heptose biosynthesis;
Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229932.peg.1200 CDS AEJN02000057.1 117938 118732 2 + 795 Teichoic acid translocation permease protein TagG Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229932.peg.1201 CDS AEJN02000057.1 118734 119930 3 + 1197 Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) Rhamnose containing glycans;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229932.peg.1202 CDS AEJN02000057.1 121705 124209 1 + 2505 Glycosyltransferase - none -
fig|6666666.229932.peg.1203 CDS AEJN02000057.1 124742 125689 2 + 948 O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-) - none -
fig|6666666.229932.peg.1204 CDS AEJN02000057.1 125652 127070 3 + 1419 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) - none -
fig|6666666.229932.peg.1205 CDS AEJN02000057.1 127621 128424 1 + 804 Exodeoxyribonuclease III (EC 3.1.11.2) DNA repair, bacterial
fig|6666666.229932.peg.1206 CDS AEJN02000057.1 128424 129218 3 + 795 DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase Rhamnose containing glycans
fig|6666666.229932.peg.1207 CDS AEJN02000057.1 129243 129785 3 + 543 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229932.peg.1208 CDS AEJN02000057.1 129746 130270 2 + 525 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229932.peg.1209 CDS AEJN02000057.1 131172 130432 -3 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229932.peg.1210 CDS AEJN02000057.1 132104 131451 -2 - 654 GTP cyclohydrolase II (EC 3.5.4.25) Molybdenum cofactor biosynthesis;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster
fig|6666666.229932.peg.1211 CDS AEJN02000057.1 132193 132921 1 + 729 Phosphatidylglycerophosphatase B (EC 3.1.3.27) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Osmotic stress cluster
fig|6666666.229932.peg.1212 CDS AEJN02000057.1 132971 133885 2 + 915 ROK family Glucokinase with ambiguous substrate specificity - none -
fig|6666666.229932.peg.1213 CDS AEJN02000057.1 135245 134661 -2 - 585 Putative lipoprotein yceB precursor - none -
fig|6666666.229932.peg.1214 CDS AEJN02000057.1 135446 135967 2 + 522 unknown - none -
fig|6666666.229932.peg.1215 CDS AEJN02000057.1 135988 136773 1 + 786 serine/threonine protein kinase - none -
fig|6666666.229932.peg.1216 CDS AEJN02000057.1 136770 136898 3 + 129 hypothetical protein - none -
fig|6666666.229932.peg.1217 CDS AEJN02000057.1 139014 137281 -3 - 1734 Transport ATP-binding protein CydC Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229932.peg.1218 CDS AEJN02000057.1 140777 139014 -2 - 1764 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229932.peg.1219 CDS AEJN02000057.1 141836 140883 -2 - 954 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase;
pyrimidine conversions
fig|6666666.229932.peg.1220 CDS AEJN02000057.1 142753 141896 -1 - 858 FIG000875: Thioredoxin domain-containing protein EC-YbbN - none -
fig|6666666.229932.peg.1221 CDS AEJN02000057.1 144204 143473 -3 - 732 Molybdopterin biosynthesis protein MoeB Molybdenum cofactor biosynthesis
fig|6666666.229932.peg.1222 CDS AEJN02000057.1 145434 144220 -3 - 1215 Molybdopterin biosynthesis protein MoeA Molybdenum cofactor biosynthesis
fig|6666666.229932.peg.1223 CDS AEJN02000057.1 145563 146219 3 + 657 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Molybdenum cofactor biosynthesis;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229932.peg.1224 CDS AEJN02000057.1 147760 146318 -1 - 1443 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229932.peg.1225 CDS AEJN02000057.1 147920 148396 2 + 477 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229932.peg.1226 CDS AEJN02000057.1 148774 148472 -1 - 303 FIG004454: RNA binding protein - none -
fig|6666666.229932.peg.1227 CDS AEJN02000057.1 148942 149241 1 + 300 Phage-related protein - none -
fig|6666666.229932.peg.1228 CDS AEJN02000057.1 149238 149534 3 + 297 FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin) - none -
fig|6666666.229932.peg.1229 CDS AEJN02000057.1 150181 149567 -1 - 615 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229932.peg.1230 CDS AEJN02000057.1 150208 151605 1 + 1398 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229932.peg.1231 CDS AEJN02000058.1 923 96 -2 - 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Peptidoglycan Biosynthesis
fig|6666666.229932.peg.1232 CDS AEJN02000058.1 1451 957 -2 - 495 Chorismate--pyruvate lyase (EC 4.1.3.40) Ubiquinone Biosynthesis
fig|6666666.229932.peg.1233 CDS AEJN02000058.1 3525 1444 -3 - 2082 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229932.peg.1234 CDS AEJN02000058.1 5650 3527 -1 - 2124 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) CBSS-176299.4.peg.1292;
CBSS-176299.4.peg.1292;
Stringent Response, (p)ppGpp metabolism;
Stringent Response, (p)ppGpp metabolism
fig|6666666.229932.peg.1235 CDS AEJN02000058.1 5962 5696 -1 - 267 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) CBSS-176299.4.peg.1292;
RNA polymerase bacterial
fig|6666666.229932.peg.1236 CDS AEJN02000058.1 6730 6020 -1 - 711 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229932.peg.1237 CDS AEJN02000058.1 6901 7905 1 + 1005 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229932.peg.1238 CDS AEJN02000058.1 10089 10253 3 + 165 Mobile element protein - none -
fig|6666666.229932.peg.1239 CDS AEJN02000058.1 10405 11061 1 + 657 Mobile element protein - none -
fig|6666666.229932.peg.1240 CDS AEJN02000058.1 12103 11393 -1 - 711 FIG00698721: hypothetical protein - none -
fig|6666666.229932.peg.1241 CDS AEJN02000059.1 1656 466 -3 - 1191 hypothetical protein - none -
fig|6666666.229932.peg.1242 CDS AEJN02000059.1 3280 1676 -1 - 1605 hypothetical protein - none -
fig|6666666.229932.peg.1243 CDS AEJN02000060.1 274 17 -1 - 258 Mobile element protein - none -
fig|6666666.229932.peg.1244 CDS AEJN02000060.1 690 415 -3 - 276 hypothetical protein - none -
fig|6666666.229932.peg.1245 CDS AEJN02000061.1 1065 73 -3 - 993 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229932.peg.1246 CDS AEJN02000061.1 1249 1848 1 + 600 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) Dipeptidases (EC 3.4.13.-)
fig|6666666.229932.peg.1247 CDS AEJN02000061.1 2011 1880 -1 - 132 hypothetical protein - none -
fig|6666666.229932.peg.1248 CDS AEJN02000061.1 3493 2036 -1 - 1458 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis Thiamin biosynthesis;
Thiamin biosynthesis;
tRNA modification Bacteria;
tRNA modification Bacteria
fig|6666666.229932.peg.1249 CDS AEJN02000061.1 3799 4899 1 + 1101 Cytochrome c-type protein TorY - none -
fig|6666666.229932.peg.1250 CDS AEJN02000061.1 4960 7440 1 + 2481 Trimethylamine-N-oxide reductase (EC 1.6.6.9) - none -
fig|6666666.229932.peg.1251 CDS AEJN02000061.1 8290 7511 -1 - 780 Protein of unknown function DUF419 - none -
fig|6666666.229932.peg.1252 CDS AEJN02000061.1 8520 9977 3 + 1458 2-oxoglutarate/malate translocator - none -
fig|6666666.229932.peg.1253 CDS AEJN02000061.1 10192 10446 1 + 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.1254 CDS AEJN02000061.1 10443 10595 3 + 153 StbE replicon stabilization toxin - none -
fig|6666666.229932.peg.1255 CDS AEJN02000061.1 10579 10725 1 + 147 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.1256 CDS AEJN02000061.1 11523 10738 -3 - 786 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229932.peg.1257 CDS AEJN02000061.1 12076 11684 -1 - 393 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229932.peg.1258 CDS AEJN02000061.1 12521 12093 -2 - 429 LSU ribosomal protein L13p (L13Ae) - none -
fig|6666666.229932.peg.1259 CDS AEJN02000061.1 13359 12763 -3 - 597 hypothetical protein - none -
fig|6666666.229932.peg.1260 CDS AEJN02000061.1 15351 13372 -3 - 1980 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229932.peg.1261 CDS AEJN02000061.1 19055 15351 -2 - 3705 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DNA repair, bacterial RecBCD pathway
fig|6666666.229932.peg.1262 CDS AEJN02000061.1 19443 19087 -3 - 357 DsrE-related protein - none -
fig|6666666.229932.peg.1263 CDS AEJN02000061.1 20397 19867 -3 - 531 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59) Fatty Acid Biosynthesis FASII
fig|6666666.229932.peg.1264 CDS AEJN02000061.1 22324 20540 -1 - 1785 ATP-dependent protease La (EC 3.4.21.53) Type II Proteasome bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229932.peg.1265 CDS AEJN02000061.1 22471 22917 1 + 447 Macrodomain Ter protein YcbG - none -
fig|6666666.229932.peg.1266 CDS AEJN02000061.1 23192 22983 -2 - 210 Cold shock protein CspD Cold shock, CspA family of proteins
fig|6666666.229932.peg.1267 CDS AEJN02000061.1 23547 23383 -3 - 165 hypothetical protein - none -
fig|6666666.229932.peg.1268 CDS AEJN02000061.1 24311 23598 -2 - 714 tRNA pseudouridine synthase C (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria
fig|6666666.229932.peg.1269 CDS AEJN02000061.1 24622 24308 -1 - 315 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) - none -
fig|6666666.229932.peg.1270 CDS AEJN02000061.1 24730 25512 1 + 783 Zn-ribbon-containing, possibly nucleic-acid-binding protein - none -
fig|6666666.229932.peg.1271 CDS AEJN02000061.1 25521 26360 3 + 840 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229932.peg.1272 CDS AEJN02000061.1 27662 26412 -2 - 1251 Phosphoglycerate transport system transcriptional regulatory protein PgtA Phosphoglycerate transport system
fig|6666666.229932.peg.1273 CDS AEJN02000061.1 29637 27655 -3 - 1983 Phosphoglycerate transport system sensor protein PgtB (EC 2.7.3.-) Phosphoglycerate transport system
fig|6666666.229932.peg.1274 CDS AEJN02000061.1 30884 29634 -2 - 1251 Phosphoglycerate transport regulatory protein PgtC Phosphoglycerate transport system
fig|6666666.229932.peg.1275 CDS AEJN02000061.1 31258 32109 1 + 852 ABC-type Fe3+ transport system, periplasmic component - none -
fig|6666666.229932.peg.1276 CDS AEJN02000061.1 32278 33357 1 + 1080 Thiamin ABC transporter, ATPase component Thiamin biosynthesis
fig|6666666.229932.peg.1277 CDS AEJN02000061.1 33360 35054 3 + 1695 Ferric iron ABC transporter, permease protein Iron acquisition in Streptococcus
fig|6666666.229932.peg.1278 CDS AEJN02000061.1 35076 35465 3 + 390 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229932.peg.1279 CDS AEJN02000061.1 35459 36133 2 + 675 Ferric iron ABC transporter, ATP-binding protein Iron acquisition in Streptococcus
fig|6666666.229932.peg.1280 CDS AEJN02000061.1 36795 36259 -3 - 537 Putative transporting ATPase - none -
fig|6666666.229932.peg.1281 CDS AEJN02000061.1 38331 36892 -3 - 1440 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229932.peg.1282 CDS AEJN02000061.1 39493 38864 -1 - 630 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 Bacterial Cell Division;
RNA methylation
fig|6666666.229932.peg.1283 CDS AEJN02000061.1 40497 39628 -3 - 870 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229932.peg.1284 CDS AEJN02000061.1 40932 40534 -3 - 399 DNA-binding protein H-NS - none -
fig|6666666.229932.peg.1285 CDS AEJN02000061.1 41373 42905 3 + 1533 Na+/H+ antiporter - none -
fig|6666666.229932.peg.1286 CDS AEJN02000061.1 43750 43040 -1 - 711 hypothetical protein - none -
fig|6666666.229932.peg.1287 CDS AEJN02000061.1 44433 43756 -3 - 678 FIG00904286: hypothetical protein - none -
fig|6666666.229932.peg.1288 CDS AEJN02000061.1 44574 44927 3 + 354 Putative translation initiation inhibitor, yjgF family - none -
fig|6666666.229932.peg.1289 CDS AEJN02000061.1 45679 44969 -1 - 711 hypothetical protein - none -
fig|6666666.229932.peg.1290 CDS AEJN02000061.1 47398 46445 -1 - 954 Glycosyltransferase - none -
fig|6666666.229932.peg.1291 CDS AEJN02000061.1 48432 47542 -3 - 891 hypothetical protein - none -
fig|6666666.229932.peg.1292 CDS AEJN02000061.1 50093 48435 -2 - 1659 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229932.peg.1293 CDS AEJN02000061.1 51090 50479 -3 - 612 Adenine phosphoribosyltransferase (EC 2.4.2.7) Purine conversions;
cAMP signaling in bacteria
fig|6666666.229932.peg.1294 CDS AEJN02000061.1 52068 51112 -3 - 957 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) KDO2-Lipid A biosynthesis
fig|6666666.229932.peg.1295 CDS AEJN02000061.1 52951 52184 -1 - 768 Putative membrane protein YfcA - none -
fig|6666666.229932.peg.1296 CDS AEJN02000061.1 53827 52955 -1 - 873 Murein endopeptidase - none -
fig|6666666.229932.peg.1297 CDS AEJN02000061.1 54921 53848 -3 - 1074 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229932.peg.1298 CDS AEJN02000061.1 58266 54943 -3 - 3324 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229932.peg.1299 CDS AEJN02000061.1 59690 58275 -2 - 1416 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229932.peg.1300 CDS AEJN02000061.1 60313 59696 -1 - 618 SeqA protein, negative modulator of initiation of replication - none -
fig|6666666.229932.peg.1301 CDS AEJN02000061.1 60400 61200 1 + 801 Esterase ybfF (EC 3.1.-.-) - none -
fig|6666666.229932.peg.1302 CDS AEJN02000061.1 61620 62144 3 + 525 Flavodoxin 1 Flavodoxin
fig|6666666.229932.peg.1303 CDS AEJN02000061.1 62163 62603 3 + 441 Ferric uptake regulation protein FUR Bacterial RNA-metabolizing Zn-dependent hydrolases;
Oxidative stress
fig|6666666.229932.peg.1304 CDS AEJN02000061.1 62771 65434 2 + 2664 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229932.peg.1305 CDS AEJN02000061.1 65502 65852 3 + 351 FIG00782386: hypothetical protein - none -
fig|6666666.229932.peg.1306 CDS AEJN02000061.1 66203 65886 -2 - 318 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229932.peg.1307 CDS AEJN02000061.1 66901 66209 -1 - 693 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis;
Riboflavin synthesis cluster
fig|6666666.229932.peg.1308 CDS AEJN02000061.1 68067 66931 -3 - 1137 Heat shock (predicted periplasmic) protein YciM, precursor Osmotic stress cluster
fig|6666666.229932.peg.1309 CDS AEJN02000061.1 68417 68121 -2 - 297 Inner membrane protein yciS - none -
fig|6666666.229932.peg.1310 CDS AEJN02000061.1 68803 68516 -1 - 288 Integration host factor beta subunit DNA structural proteins, bacterial
fig|6666666.229932.peg.1311 CDS AEJN02000061.1 70511 68865 -2 - 1647 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229932.peg.1312 CDS AEJN02000061.1 71286 70609 -3 - 678 Cytidylate kinase (EC 2.7.4.25) pyrimidine conversions
fig|6666666.229932.peg.1313 CDS AEJN02000061.1 72172 71279 -1 - 894 Membrane protein LAPB - none -
fig|6666666.229932.peg.1314 CDS AEJN02000061.1 72465 74831 3 + 2367 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229932.peg.1315 CDS AEJN02000061.1 74909 77683 2 + 2775 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229932.peg.1316 CDS AEJN02000061.1 78082 77750 -1 - 333 Branched-chain amino acid transport protein azlD - none -
fig|6666666.229932.peg.1317 CDS AEJN02000061.1 78811 78083 -1 - 729 Branched-chain amino acid transport protein AzlC - none -
fig|6666666.229932.peg.1318 CDS AEJN02000061.1 79748 78816 -2 - 933 Transcriptional activator MetR LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Methionine Biosynthesis
fig|6666666.229932.peg.1319 CDS AEJN02000061.1 80039 82315 2 + 2277 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Methionine Biosynthesis
fig|6666666.229932.peg.1320 CDS AEJN02000061.1 83239 82946 -1 - 294 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229932.peg.1321 CDS AEJN02000061.1 84256 83243 -1 - 1014 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229932.peg.1322 CDS AEJN02000061.1 86148 84325 -3 - 1824 hypothetical protein - none -
fig|6666666.229932.peg.1323 CDS AEJN02000061.1 86858 86211 -2 - 648 CRISPR-associated RecB family exonuclease Cas4 / CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229932.peg.1324 CDS AEJN02000061.1 87927 87034 -3 - 894 CRISPR-associated protein, Csd2 family CRISPRs
fig|6666666.229932.peg.1325 CDS AEJN02000061.1 89982 87949 -3 - 2034 CRISPR-associated protein, Csd1 family CRISPRs
fig|6666666.229932.peg.1326 CDS AEJN02000061.1 90758 89979 -2 - 780 CRISPR-associated protein, Cas5d family CRISPRs
fig|6666666.229932.peg.1327 CDS AEJN02000061.1 91831 90767 -1 - 1065 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229932.peg.1328 CDS AEJN02000061.1 93233 91845 -2 - 1389 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229932.peg.1329 CDS AEJN02000061.1 93433 96366 1 + 2934 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) Ammonia assimilation;
CBSS-316057.3.peg.3521
fig|6666666.229932.peg.1330 CDS AEJN02000061.1 96701 96402 -2 - 300 Putative transcriptional regulator - none -
fig|6666666.229932.peg.1331 CDS AEJN02000061.1 97048 96698 -1 - 351 YPPCP.09C homologue - none -
fig|6666666.229932.peg.1332 CDS AEJN02000061.1 98818 97235 -1 - 1584 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229932.peg.1333 CDS AEJN02000061.1 98888 99004 2 + 117 hypothetical protein - none -
fig|6666666.229932.peg.1334 CDS AEJN02000061.1 99175 100002 1 + 828 Nucleoside-diphosphate-sugar epimerases - none -
fig|6666666.229932.peg.1335 CDS AEJN02000061.1 100097 101434 2 + 1338 Argininosuccinate synthase (EC 6.3.4.5) - none -
fig|6666666.229932.peg.1336 CDS AEJN02000061.1 101625 101870 3 + 246 FIG00696862: hypothetical protein - none -
fig|6666666.229932.peg.1337 CDS AEJN02000061.1 102103 103872 1 + 1770 Gamma-glutamyltranspeptidase (EC 2.3.2.2) Glutathione: Biosynthesis and gamma-glutamyl cycle
fig|6666666.229932.peg.1338 CDS AEJN02000061.1 105392 103998 -2 - 1395 Sensory histidine kinase QseC Orphan regulatory proteins
fig|6666666.229932.peg.1339 CDS AEJN02000061.1 105807 105361 -3 - 447 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229932.peg.1340 CDS AEJN02000061.1 106021 105776 -1 - 246 Two-component system response regulator QseB Orphan regulatory proteins
fig|6666666.229932.peg.1341 CDS AEJN02000061.1 106575 106159 -3 - 417 Protein ygiW precursor - none -
fig|6666666.229932.peg.1342 CDS AEJN02000061.1 106947 107864 3 + 918 formate dehydrogenase formation protein FdhE Formate hydrogenase
fig|6666666.229932.peg.1343 CDS AEJN02000061.1 110036 108060 -2 - 1977 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) Purine conversions;
pyrimidine conversions
fig|6666666.229932.peg.1344 CDS AEJN02000061.1 110266 111165 1 + 900 Iron compound ABC uptake transporter substrate-binding protein PiuA - none -
fig|6666666.229932.peg.1345 CDS AEJN02000061.1 111225 112190 3 + 966 Ferric anguibactin transport system permease protein fatD - none -
fig|6666666.229932.peg.1346 CDS AEJN02000061.1 112198 113121 1 + 924 Ferric vibriobactin, enterobactin transport system, permease protein VctG (TC 3.A.1.14.6) - none -
fig|6666666.229932.peg.1347 CDS AEJN02000061.1 113133 113891 3 + 759 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) - none -
fig|6666666.229932.peg.1348 CDS AEJN02000061.1 115531 113999 -1 - 1533 Cell wall endopeptidase, family M23/M37 Glutaredoxins
fig|6666666.229932.peg.1349 CDS AEJN02000061.1 115719 116492 3 + 774 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229932.peg.1350 CDS AEJN02000061.1 116504 117289 2 + 786 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229932.peg.1351 CDS AEJN02000061.1 119057 117684 -2 - 1374 sodium-dependent transporter - none -
fig|6666666.229932.peg.1352 CDS AEJN02000061.1 119717 119082 -2 - 636 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229932.peg.1353 CDS AEJN02000061.1 120649 119864 -1 - 786 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.1354 CDS AEJN02000061.1 121262 120642 -2 - 621 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.1355 CDS AEJN02000061.1 122348 121269 -2 - 1080 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.1356 CDS AEJN02000061.1 124587 122359 -3 - 2229 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.1357 CDS AEJN02000061.1 125178 124588 -3 - 591 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.1358 CDS AEJN02000061.1 125759 125178 -2 - 582 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229932.peg.1359 CDS AEJN02000061.1 126837 125950 -3 - 888 Cell division inhibitor CBSS-83333.1.peg.946;
Persister Cells
fig|6666666.229932.peg.1360 CDS AEJN02000061.1 127328 126861 -2 - 468 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229932.peg.1361 CDS AEJN02000061.1 127353 127475 3 + 123 hypothetical protein - none -
fig|6666666.229932.peg.1362 CDS AEJN02000061.1 127513 128526 1 + 1014 Malate dehydrogenase (EC 1.1.1.37) Serine-glyoxylate cycle;
TCA Cycle
fig|6666666.229932.peg.1363 CDS AEJN02000061.1 129422 128682 -2 - 741 FIG00698611: hypothetical protein - none -
fig|6666666.229932.peg.1364 CDS AEJN02000062.1 79 774 1 + 696 hypothetical protein - none -
fig|6666666.229932.peg.1365 CDS AEJN02000062.1 784 1437 1 + 654 hypothetical protein - none -
fig|6666666.229932.peg.1366 CDS AEJN02000062.1 2180 1506 -2 - 675 3-keto-L-gulonate 6-phosphate decarboxylase L-ascorbate utilization (and related gene clusters)
fig|6666666.229932.peg.1367 CDS AEJN02000062.1 2718 2257 -3 - 462 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229932.peg.1368 CDS AEJN02000062.1 4545 2773 -3 - 1773 Ascorbate-specific PTS system, EIIC component L-ascorbate utilization (and related gene clusters)
fig|6666666.229932.peg.1369 CDS AEJN02000062.1 4891 5982 1 + 1092 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) L-ascorbate utilization (and related gene clusters)
fig|6666666.229932.peg.1370 CDS AEJN02000062.1 6074 6823 2 + 750 Ascorbate utilization transcriptional regulator UlaR, HTH-type L-ascorbate utilization (and related gene clusters)
fig|6666666.229932.peg.1371 CDS AEJN02000062.1 6864 7724 3 + 861 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229932.peg.1372 CDS AEJN02000062.1 7718 8413 2 + 696 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) L-ascorbate utilization (and related gene clusters)
fig|6666666.229932.peg.1373 CDS AEJN02000062.1 9082 10038 1 + 957 hypothetical protein - none -
fig|6666666.229932.peg.1374 CDS AEJN02000062.1 10089 11225 3 + 1137 hypothetical protein - none -
fig|6666666.229932.peg.1375 CDS AEJN02000062.1 11268 12212 3 + 945 hypothetical protein - none -
fig|6666666.229932.peg.1376 CDS AEJN02000062.1 12461 12901 2 + 441 hypothetical protein - none -
fig|6666666.229932.peg.1377 CDS AEJN02000062.1 12901 13767 1 + 867 hypothetical protein - none -
fig|6666666.229932.peg.1378 CDS AEJN02000062.1 15051 13837 -3 - 1215 Tyrosine-specific transport protein - none -
fig|6666666.229932.peg.1379 CDS AEJN02000062.1 15165 15302 3 + 138 hypothetical protein - none -
fig|6666666.229932.peg.1380 CDS AEJN02000062.1 15346 15540 1 + 195 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229932.peg.1381 CDS AEJN02000062.1 16172 16906 2 + 735 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) - none -
fig|6666666.229932.peg.1382 CDS AEJN02000062.1 16925 17830 2 + 906 Ribosomal protein S6 glutaminyl transferase Ribosome biogenesis bacterial
fig|6666666.229932.peg.1383 CDS AEJN02000062.1 18731 18126 -2 - 606 FIG026291: Hypothetical periplasmic protein - none -
fig|6666666.229932.peg.1384 CDS AEJN02000062.1 20229 18835 -3 - 1395 Fumarate hydratase class II (EC 4.2.1.2) TCA Cycle
fig|6666666.229932.peg.1385 CDS AEJN02000062.1 20439 20888 3 + 450 DNA polymerase III chi subunit (EC 2.7.7.7) CBSS-208964.1.peg.3826
fig|6666666.229932.peg.1386 CDS AEJN02000062.1 20927 21241 2 + 315 RNA-binding domain protein - none -
fig|6666666.229932.peg.1387 CDS AEJN02000062.1 21313 24177 1 + 2865 Valyl-tRNA synthetase (EC 6.1.1.9) CBSS-208964.1.peg.3826;
tRNA aminoacylation, Val
fig|6666666.229932.peg.1388 CDS AEJN02000062.1 24244 25137 1 + 894 hypothetical protein - none -
fig|6666666.229932.peg.1389 CDS AEJN02000062.1 25376 25134 -2 - 243 HipA protein Persister Cells
fig|6666666.229932.peg.1390 CDS AEJN02000062.1 25618 25797 1 + 180 hypothetical protein - none -
fig|6666666.229932.peg.1391 CDS AEJN02000062.1 26032 25751 -1 - 282 HipB protein Persister Cells
fig|6666666.229932.peg.1392 CDS AEJN02000062.1 27690 26176 -3 - 1515 Inner membrane component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229932.peg.1393 CDS AEJN02000062.1 28863 27703 -3 - 1161 Membrane fusion component of tripartite multidrug resistance system Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria
fig|6666666.229932.peg.1394 CDS AEJN02000062.1 29071 29553 1 + 483 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229932.peg.1395 CDS AEJN02000062.1 31651 29672 -1 - 1980 Exoribonuclease II (EC 3.1.13.1) RNA processing and degradation, bacterial
fig|6666666.229932.peg.1396 CDS AEJN02000062.1 32512 31724 -1 - 789 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) Fatty Acid Biosynthesis FASII
fig|6666666.229932.peg.1397 CDS AEJN02000062.1 33460 32603 -1 - 858 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229932.peg.1398 CDS AEJN02000062.1 34257 33583 -3 - 675 Queuosine Biosynthesis QueE Radical SAM Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229932.peg.1399 CDS AEJN02000062.1 34643 34218 -2 - 426 Queuosine biosynthesis QueD, PTPS-I Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229932.peg.1400 CDS AEJN02000062.1 34979 35944 2 + 966 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229932.peg.1401 CDS AEJN02000062.1 36078 39224 3 + 3147 CRISPR-associated helicase Cas3, Yersinia-type CRISPRs
fig|6666666.229932.peg.1402 CDS AEJN02000062.1 39833 39270 -2 - 564 CRISPR-associated protein, Csy4 family CRISPRs
fig|6666666.229932.peg.1403 CDS AEJN02000062.1 40846 39836 -1 - 1011 CRISPR-associated protein, Csy3 family CRISPRs
fig|6666666.229932.peg.1404 CDS AEJN02000062.1 41805 40846 -3 - 960 CRISPR-associated protein, Csy2 family CRISPRs
fig|6666666.229932.peg.1405 CDS AEJN02000062.1 43161 41815 -3 - 1347 CRISPR-associated protein, Csy1 family CRISPRs
fig|6666666.229932.peg.1406 CDS AEJN02000062.1 43684 43571 -1 - 114 hypothetical protein - none -
fig|6666666.229932.peg.1407 CDS AEJN02000062.1 43901 45409 2 + 1509 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) Inositol catabolism
fig|6666666.229932.peg.1408 CDS AEJN02000062.1 45700 46638 1 + 939 Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) Inositol catabolism
fig|6666666.229932.peg.1409 CDS AEJN02000062.1 46940 47878 2 + 939 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229932.peg.1410 CDS AEJN02000062.1 47962 48894 1 + 933 Inositol transport system sugar-binding protein Inositol catabolism
fig|6666666.229932.peg.1411 CDS AEJN02000062.1 48963 50468 3 + 1506 Inositol transport system ATP-binding protein Inositol catabolism
fig|6666666.229932.peg.1412 CDS AEJN02000062.1 50519 51472 2 + 954 Inositol transport system permease protein Inositol catabolism
fig|6666666.229932.peg.1413 CDS AEJN02000062.1 54177 51556 -3 - 2622 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 5-FCL-like protein;
Butanol Biosynthesis;
Butanol Biosynthesis;
Fermentations: Lactate;
Fermentations: Mixed acid;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229932.peg.1414 CDS AEJN02000062.1 54307 54447 1 + 141 hypothetical protein - none -
fig|6666666.229932.peg.1415 CDS AEJN02000062.1 57154 54527 -1 - 2628 Iron siderophore receptor protein - none -
fig|6666666.229932.peg.1416 CDS AEJN02000062.1 58375 57374 -1 - 1002 Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229932.peg.1417 CDS AEJN02000062.1 60206 58356 -2 - 1851 Protein-export membrane protein SecD (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229932.peg.1418 CDS AEJN02000062.1 60536 60237 -2 - 300 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229932.peg.1419 CDS AEJN02000062.1 61979 60828 -2 - 1152 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229932.peg.1420 CDS AEJN02000062.1 62448 63584 3 + 1137 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229932.peg.1421 CDS AEJN02000062.1 64719 63628 -3 - 1092 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
Scaffold proteins for [4Fe-4S] cluster assembly (MRP family);
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229932.peg.1422 CDS AEJN02000062.1 65349 64810 -3 - 540 hypothetical protein - none -
fig|6666666.229932.peg.1423 CDS AEJN02000062.1 65876 65466 -2 - 411 ABC-type Fe3+-hydroxamate transport system, periplasmic component - none -
fig|6666666.229932.peg.1424 CDS AEJN02000062.1 67318 66149 -1 - 1170 FIG00849539: hypothetical protein - none -
fig|6666666.229932.peg.1425 CDS AEJN02000062.1 68920 67754 -1 - 1167 FIG00698381: hypothetical protein - none -
fig|6666666.229932.peg.1426 CDS AEJN02000062.1 69409 68978 -1 - 432 FIG00698381: hypothetical protein - none -
fig|6666666.229932.peg.1427 CDS AEJN02000062.1 70037 69456 -2 - 582 FIG00697578: hypothetical protein - none -
fig|6666666.229932.peg.1428 CDS AEJN02000062.1 70796 70512 -2 - 285 hypothetical protein - none -
fig|6666666.229932.peg.1429 CDS AEJN02000062.1 71167 70937 -1 - 231 transcriptional regulator, putative - none -
fig|6666666.229932.peg.1430 CDS AEJN02000063.1 98 496 2 + 399 Integrase - none -
fig|6666666.229932.peg.1431 CDS AEJN02000063.1 908 759 -2 - 150 hypothetical protein - none -
fig|6666666.229932.peg.1432 CDS AEJN02000063.1 2206 1034 -1 - 1173 FOG: TPR repeat, SEL1 subfamily - none -
fig|6666666.229932.peg.1433 CDS AEJN02000063.1 2457 2278 -3 - 180 hypothetical protein - none -
fig|6666666.229932.peg.1434 CDS AEJN02000064.1 302 1204 2 + 903 hypothetical protein - none -
fig|6666666.229932.peg.1435 CDS AEJN02000064.1 1804 2853 1 + 1050 Probable phospholipase protein - none -
fig|6666666.229932.peg.1436 CDS AEJN02000064.1 2889 4007 3 + 1119 FOG: TPR repeat, SEL1 subfamily - none -
fig|6666666.229932.peg.1437 CDS AEJN02000064.1 4318 4716 1 + 399 hypothetical protein - none -
fig|6666666.229932.peg.1438 CDS AEJN02000064.1 5469 4942 -3 - 528 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229932.peg.1439 CDS AEJN02000064.1 6645 5794 -3 - 852 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis;
pyrimidine conversions
fig|6666666.229932.peg.1440 CDS AEJN02000064.1 7439 6642 -2 - 798 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229932.peg.1441 CDS AEJN02000064.1 8245 7448 -1 - 798 Protein of unknown function DUF81 - none -
fig|6666666.229932.peg.1442 CDS AEJN02000064.1 8847 8248 -3 - 600 Adenosine (5@1)-pentaphospho-(5@1@1)-adenosine pyrophosphohydrolase (EC 3.6.1.-) CBSS-224911.1.peg.435;
CBSS-364106.7.peg.3204;
Nudix proteins (nucleoside triphosphate hydrolases);
Phosphoglycerate mutase protein family
fig|6666666.229932.peg.1443 CDS AEJN02000064.1 9067 9486 1 + 420 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229932.peg.1444 CDS AEJN02000064.1 9497 11005 2 + 1509 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229932.peg.1445 CDS AEJN02000064.1 11002 11967 1 + 966 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229932.peg.1446 CDS AEJN02000064.1 11989 12861 1 + 873 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229932.peg.1447 CDS AEJN02000064.1 14149 13940 -1 - 210 Cold shock protein CspA Cold shock, CspA family of proteins
fig|6666666.229932.peg.1448 CDS AEJN02000064.1 16040 14595 -2 - 1446 Glutamyl-tRNA synthetase (EC 6.1.1.17) Heme and Siroheme Biosynthesis;
tRNA aminoacylation, Glu and Gln
fig|6666666.229932.peg.1449 CDS AEJN02000064.1 16628 17416 2 + 789 Mannosyltransferase OCH1 and related enzymes - none -
fig|6666666.229932.peg.1450 CDS AEJN02000064.1 17529 18905 3 + 1377 Argininosuccinate lyase (EC 4.3.2.1) - none -
fig|6666666.229932.peg.1451 CDS AEJN02000064.1 19207 20556 1 + 1350 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Proline Synthesis
fig|6666666.229932.peg.1452 CDS AEJN02000064.1 21046 22500 1 + 1455 Catalase (EC 1.11.1.6) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229932.peg.1453 CDS AEJN02000065.1 909 148 -3 - 762 FIG002813: LPPG:FO 2-phospho-L-lactate transferase like, CofD-like - none -
fig|6666666.229932.peg.1454 CDS AEJN02000065.1 1472 2485 2 + 1014 Molybdenum cofactor biosynthesis protein MoaA Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229932.peg.1455 CDS AEJN02000065.1 2538 3020 3 + 483 Molybdenum cofactor biosynthesis protein MoaC Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229932.peg.1456 CDS AEJN02000065.1 3020 3265 2 + 246 Molybdenum cofactor biosynthesis protein MoaD Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229932.peg.1457 CDS AEJN02000065.1 3476 3670 2 + 195 Molybdenum cofactor biosynthesis protein MoaE Molybdenum cofactor biosynthesis;
ar-104-EC Molybdenum cofactor biosynthesis moaABCDE
fig|6666666.229932.peg.1458 CDS AEJN02000065.1 3870 4511 3 + 642 Stringent starvation protein A Carbon Starvation
fig|6666666.229932.peg.1459 CDS AEJN02000065.1 4523 4984 2 + 462 Stringent starvation protein B Carbon Starvation
fig|6666666.229932.peg.1460 CDS AEJN02000065.1 6550 5147 -1 - 1404 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.229932.peg.1461 CDS AEJN02000065.1 6746 7975 2 + 1230 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229932.peg.1462 CDS AEJN02000065.1 8052 8780 3 + 729 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229932.peg.1463 CDS AEJN02000065.1 9511 8870 -1 - 642 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229932.peg.1464 CDS AEJN02000065.1 11370 10417 -3 - 954 LsrR, transcriptional repressor of lsr operon Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229932.peg.1465 CDS AEJN02000065.1 11626 13116 1 + 1491 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229932.peg.1466 CDS AEJN02000065.1 13152 14183 3 + 1032 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229932.peg.1467 CDS AEJN02000065.1 14197 15201 1 + 1005 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229932.peg.1468 CDS AEJN02000065.1 15226 16323 1 + 1098 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229932.peg.1469 CDS AEJN02000065.1 16342 17220 1 + 879 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229932.peg.1470 CDS AEJN02000065.1 17253 17555 3 + 303 Autoinducer 2 (AI-2) modifying protein LsrG Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
fig|6666666.229932.peg.1471 CDS AEJN02000065.1 19065 17659 -3 - 1407 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycerate metabolism;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229932.peg.1472 CDS AEJN02000065.1 20340 19351 -3 - 990 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229932.peg.1473 CDS AEJN02000065.1 22156 20471 -1 - 1686 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229932.peg.1474 CDS AEJN02000065.1 23238 22432 -3 - 807 Tryptophan synthase alpha chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229932.peg.1475 CDS AEJN02000065.1 24434 23241 -2 - 1194 Tryptophan synthase beta chain (EC 4.2.1.20) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229932.peg.1476 CDS AEJN02000065.1 25211 24444 -2 - 768 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) - none -
fig|6666666.229932.peg.1477 CDS AEJN02000065.1 25244 25375 2 + 132 hypothetical protein - none -
fig|6666666.229932.peg.1478 CDS AEJN02000065.1 25874 28318 2 + 2445 Outer membrane receptor for lactoferrin or transferrin, TonB-dependent protein A - none -
fig|6666666.229932.peg.1479 CDS AEJN02000065.1 30026 28722 -2 - 1305 Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229932.peg.1480 CDS AEJN02000065.1 31833 30037 -3 - 1797 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229932.peg.1481 CDS AEJN02000065.1 32115 31849 -3 - 267 Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229932.peg.1482 CDS AEJN02000065.1 32778 32897 3 + 120 hypothetical protein - none -
fig|6666666.229932.peg.1483 CDS AEJN02000065.1 33415 33140 -1 - 276 [NiFe] hydrogenase metallocenter assembly protein HybG G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229932.peg.1484 CDS AEJN02000065.1 35257 33827 -1 - 1431 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis;
Tryptophan synthesis
fig|6666666.229932.peg.1485 CDS AEJN02000065.1 35544 35266 -3 - 279 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.1486 CDS AEJN02000065.1 35832 35554 -3 - 279 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.1487 CDS AEJN02000065.1 36928 35927 -1 - 1002 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) Auxin biosynthesis;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229932.peg.1488 CDS AEJN02000065.1 37332 36940 -3 - 393 putative - none -
fig|6666666.229932.peg.1489 CDS AEJN02000065.1 37996 37406 -1 - 591 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229932.peg.1490 CDS AEJN02000065.1 39554 38007 -2 - 1548 Anthranilate synthase, aminase component (EC 4.1.3.27) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Tryptophan synthesis
fig|6666666.229932.peg.1491 CDS AEJN02000065.1 40274 39720 -2 - 555 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) KDO2-Lipid A biosynthesis
fig|6666666.229932.peg.1492 CDS AEJN02000065.1 41209 40274 -1 - 936 Arabinose 5-phosphate isomerase (EC 5.3.1.13) KDO2-Lipid A biosynthesis
fig|6666666.229932.peg.1493 CDS AEJN02000065.1 41892 42767 3 + 876 Probable protease htpX homolog - none -
fig|6666666.229932.peg.1494 CDS AEJN02000065.1 43107 44096 3 + 990 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229932.peg.1495 CDS AEJN02000065.1 44116 46506 1 + 2391 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229932.peg.1496 CDS AEJN02000065.1 46510 46806 1 + 297 Integration host factor alpha subunit DNA structural proteins, bacterial
fig|6666666.229932.peg.1497 CDS AEJN02000065.1 46978 47346 1 + 369 Probable lipoprotein nlpC precursor - none -
fig|6666666.229932.peg.1498 CDS AEJN02000065.1 47866 47513 -1 - 354 hypothetical protein - none -
fig|6666666.229932.peg.1499 CDS AEJN02000067.1 20 358 2 + 339 hypothetical protein - none -
fig|6666666.229932.peg.1500 CDS AEJN02000067.1 612 1778 3 + 1167 hypothetical protein - none -
fig|6666666.229932.peg.1501 CDS AEJN02000067.1 1900 2028 1 + 129 hypothetical protein - none -
fig|6666666.229932.peg.1502 CDS AEJN02000067.1 2032 2181 1 + 150 hypothetical protein - none -
fig|6666666.229932.peg.1503 CDS AEJN02000067.1 2543 2869 2 + 327 VgrG-3 protein - none -
fig|6666666.229932.peg.1504 CDS AEJN02000068.1 1686 382 -3 - 1305 Predicted ATPase (AAA+ superfamily) - none -
fig|6666666.229932.peg.1505 CDS AEJN02000068.1 3423 2092 -3 - 1332 ATP-dependent RNA helicase SrmB - none -
fig|6666666.229932.peg.1506 CDS AEJN02000068.1 3523 4221 1 + 699 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229932.peg.1507 CDS AEJN02000068.1 4985 4296 -2 - 690 Ribosyl nicotinamide transporter, PnuC-like NAD and NADP cofactor biosynthesis global
fig|6666666.229932.peg.1508 CDS AEJN02000068.1 5366 6025 2 + 660 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229932.peg.1509 CDS AEJN02000068.1 6047 6163 2 + 117 hypothetical protein - none -
fig|6666666.229932.peg.1510 CDS AEJN02000068.1 7155 6160 -3 - 996 VgrG-3 protein - none -
fig|6666666.229932.peg.1511 CDS AEJN02000068.1 7678 8238 1 + 561 Protein of unknown function DUF414 - none -
fig|6666666.229932.peg.1512 CDS AEJN02000068.1 8251 8685 1 + 435 Periplasmic/membrane protein associated with DUF414 - none -
fig|6666666.229932.peg.1513 CDS AEJN02000068.1 8705 10072 2 + 1368 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Heme and Siroheme Biosynthesis
fig|6666666.229932.peg.1514 CDS AEJN02000068.1 10591 10148 -1 - 444 Histone acetyltransferase HPA2 and related acetyltransferases CBSS-216591.1.peg.168
fig|6666666.229932.peg.1515 CDS AEJN02000068.1 10919 11545 2 + 627 Triosephosphate isomerase (EC 5.3.1.1) CBSS-331978.3.peg.2915;
Glycolysis and Gluconeogenesis
fig|6666666.229932.peg.1516 CDS AEJN02000068.1 11657 12514 2 + 858 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229932.peg.1517 CDS AEJN02000068.1 12554 12973 2 + 420 Nucleotidyltransferase substrate binding protein, HI0074 - none -
fig|6666666.229932.peg.1518 CDS AEJN02000068.1 12955 13284 1 + 330 Nucleotidyltransferase (EC 2.7.7.-) - none -
fig|6666666.229932.peg.1519 CDS AEJN02000068.1 13265 14266 2 + 1002 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo;
Muconate lactonizing enzyme family
fig|6666666.229932.peg.1520 CDS AEJN02000068.1 14365 14841 1 + 477 3-dehydroquinate dehydratase II (EC 4.2.1.10) CBSS-221988.1.peg.1679;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229932.peg.1521 CDS AEJN02000068.1 14948 14796 -2 - 153 hypothetical protein - none -
fig|6666666.229932.peg.1522 CDS AEJN02000068.1 14965 15432 1 + 468 Biotin carboxyl carrier protein of acetyl-CoA carboxylase CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229932.peg.1523 CDS AEJN02000068.1 15476 16822 2 + 1347 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) CBSS-221988.1.peg.1679;
Fatty Acid Biosynthesis FASII
fig|6666666.229932.peg.1524 CDS AEJN02000068.1 16931 17065 2 + 135 hypothetical protein - none -
fig|6666666.229932.peg.1525 CDS AEJN02000068.1 17120 17881 2 + 762 Periplasmic protein TonB, links inner and outer membranes - none -
fig|6666666.229932.peg.1526 CDS AEJN02000068.1 18660 19346 3 + 687 FOG: TPR repeat - none -
fig|6666666.229932.peg.1527 CDS AEJN02000068.1 19370 19642 2 + 273 FIG003021: Membrane protein CBSS-221988.1.peg.1679
fig|6666666.229932.peg.1528 CDS AEJN02000068.1 19639 21075 1 + 1437 Pantothenate:Na+ symporter (TC 2.A.21.1.1) CBSS-221988.1.peg.1679;
Coenzyme A Biosynthesis
fig|6666666.229932.peg.1529 CDS AEJN02000068.1 21085 21636 1 + 552 Protein involved in cell division - none -
fig|6666666.229932.peg.1530 CDS AEJN02000068.1 21649 22533 1 + 885 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229932.peg.1531 CDS AEJN02000068.1 22778 23728 2 + 951 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229932.peg.1532 CDS AEJN02000068.1 23816 24115 2 + 300 DNA-binding protein Fis DNA structural proteins, bacterial
fig|6666666.229932.peg.1533 CDS AEJN02000068.1 24978 24730 -3 - 249 unknown - none -
fig|6666666.229932.peg.1534 CDS AEJN02000068.1 25756 25433 -1 - 324 Ribosome hibernation protein YfiA Ribosome activity modulation
fig|6666666.229932.peg.1535 CDS AEJN02000068.1 27358 25985 -1 - 1374 Sodium/glycine symporter GlyP - none -
fig|6666666.229932.peg.1536 CDS AEJN02000068.1 28027 27755 -1 - 273 FIG00904058: hypothetical protein - none -
fig|6666666.229932.peg.1537 CDS AEJN02000068.1 28239 28027 -3 - 213 FIG003276: zinc-binding protein - none -
fig|6666666.229932.peg.1538 CDS AEJN02000068.1 28852 28229 -1 - 624 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229932.peg.1539 CDS AEJN02000068.1 29615 29238 -2 - 378 Mobile element protein - none -
fig|6666666.229932.peg.1540 CDS AEJN02000069.1 240 40 -3 - 201 Mobile element protein - none -
fig|6666666.229932.peg.1541 CDS AEJN02000069.1 367 242 -1 - 126 Mobile element protein - none -
fig|6666666.229932.peg.1542 CDS AEJN02000070.1 398 2632 2 + 2235 DNA internalization-related competence protein ComEC/Rec2 KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229932.peg.1543 CDS AEJN02000070.1 2679 4427 3 + 1749 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229932.peg.1544 CDS AEJN02000070.1 4446 5420 3 + 975 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229932.peg.1545 CDS AEJN02000070.1 5442 5621 3 + 180 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster Broadly distributed proteins not in subsystems;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229932.peg.1546 CDS AEJN02000070.1 5623 6396 1 + 774 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) KDO2-Lipid A biosynthesis;
KDO2-Lipid A biosynthesis cluster 2
fig|6666666.229932.peg.1547 CDS AEJN02000070.1 6525 8354 3 + 1830 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229932.peg.1548 CDS AEJN02000070.1 9832 8741 -1 - 1092 Possible ABC transporter, periplasmic substrate X binding protein precursor ABC transporter of unknown substrate X
fig|6666666.229932.peg.1549 CDS AEJN02000070.1 10703 9852 -2 - 852 Putative ABC transporter of substrate X, permease subunit II ABC transporter of unknown substrate X
fig|6666666.229932.peg.1550 CDS AEJN02000070.1 11569 10700 -1 - 870 Putative ABC transporter of substrate X, permease subunit I ABC transporter of unknown substrate X
fig|6666666.229932.peg.1551 CDS AEJN02000070.1 12636 11566 -3 - 1071 Putative ABC transporter of substrate X, ATP-binding subunit ABC transporter of unknown substrate X
fig|6666666.229932.peg.1552 CDS AEJN02000070.1 13973 12864 -2 - 1110 Selenide,water dikinase (EC 2.7.9.3) Selenocysteine metabolism;
tRNA modification Bacteria
fig|6666666.229932.peg.1553 CDS AEJN02000072.1 2316 235 -3 - 2082 VgrG-3 protein - none -
fig|6666666.229932.peg.1554 CDS AEJN02000072.1 2627 2469 -2 - 159 hypothetical protein - none -
fig|6666666.229932.peg.1555 CDS AEJN02000073.1 241 912 1 + 672 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229932.peg.1556 CDS AEJN02000073.1 940 1689 1 + 750 Deoxyribose operon repressor, DeoR family Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229932.peg.1557 CDS AEJN02000073.1 1827 2918 3 + 1092 Putative exported protein precursor - none -
fig|6666666.229932.peg.1558 CDS AEJN02000073.1 4420 3050 -1 - 1371 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Peptidoglycan Biosynthesis;
Peptidoglycan Biosynthesis;
Sialic Acid Metabolism;
Sialic Acid Metabolism;
Transcription repair cluster;
Transcription repair cluster;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229932.peg.1559 CDS AEJN02000073.1 4506 5636 3 + 1131 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) Recycling of Peptidoglycan Amino Sugars
fig|6666666.229932.peg.1560 CDS AEJN02000073.1 5633 6547 2 + 915 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229932.peg.1561 CDS AEJN02000073.1 6712 7758 1 + 1047 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Polyamine Metabolism
fig|6666666.229932.peg.1562 CDS AEJN02000073.1 8247 7819 -3 - 429 ATP synthase epsilon chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229932.peg.1563 CDS AEJN02000073.1 9662 8289 -2 - 1374 ATP synthase beta chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229932.peg.1564 CDS AEJN02000073.1 10548 9679 -3 - 870 ATP synthase gamma chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229932.peg.1565 CDS AEJN02000073.1 12105 10564 -3 - 1542 ATP synthase alpha chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229932.peg.1566 CDS AEJN02000073.1 12666 12118 -3 - 549 ATP synthase delta chain (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229932.peg.1567 CDS AEJN02000073.1 13087 12680 -1 - 408 ATP synthase F0 sector subunit b (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229932.peg.1568 CDS AEJN02000073.1 13454 13200 -2 - 255 ATP synthase F0 sector subunit c (EC 3.6.3.14) F0F1-type ATP synthase
fig|6666666.229932.peg.1569 CDS AEJN02000073.1 14294 13506 -2 - 789 ATP synthase F0 sector subunit a - none -
fig|6666666.229932.peg.1570 CDS AEJN02000073.1 14696 14319 -2 - 378 FIG048548: ATP synthase protein I2 F0F1-type ATP synthase
fig|6666666.229932.peg.1571 CDS AEJN02000073.1 15491 14808 -2 - 684 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229932.peg.1572 CDS AEJN02000073.1 15846 15484 -3 - 363 Redox-sensing transcriptional regulator QorR NADPH:quinone oxidoreductase 2
fig|6666666.229932.peg.1573 CDS AEJN02000073.1 15998 16855 2 + 858 NADPH:quinone oxidoreductase 2 NADPH:quinone oxidoreductase 2
fig|6666666.229932.peg.1574 CDS AEJN02000073.1 19016 17127 -2 - 1890 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229932.peg.1575 CDS AEJN02000073.1 19888 19445 -1 - 444 Flavoprotein MioC Flavodoxin
fig|6666666.229932.peg.1576 CDS AEJN02000073.1 20163 19945 -3 - 219 FIG074102: hypothetical protein - none -
fig|6666666.229932.peg.1577 CDS AEJN02000073.1 20359 21372 1 + 1014 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) Glycolysis and Gluconeogenesis
fig|6666666.229932.peg.1578 CDS AEJN02000073.1 21814 21410 -1 - 405 hypothetical protein - none -
fig|6666666.229932.peg.1579 CDS AEJN02000073.1 21835 21966 1 + 132 hypothetical protein - none -
fig|6666666.229932.peg.1580 CDS AEJN02000073.1 22811 22014 -2 - 798 Serine acetyltransferase (EC 2.3.1.30) Cysteine Biosynthesis;
Methionine Biosynthesis
fig|6666666.229932.peg.1581 CDS AEJN02000073.1 23827 22814 -1 - 1014 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glutaredoxin 3 containing cluster;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.1582 CDS AEJN02000073.1 24417 23905 -3 - 513 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) Glutaredoxin 3 containing cluster
fig|6666666.229932.peg.1583 CDS AEJN02000073.1 24939 24433 -3 - 507 FIG136845: Rhodanese-related sulfurtransferase Glutaredoxin 3 containing cluster
fig|6666666.229932.peg.1584 CDS AEJN02000073.1 25200 26522 3 + 1323 Anaerobic C4-dicarboxylate membrane transporter DcuA - none -
fig|6666666.229932.peg.1585 CDS AEJN02000073.1 26692 28440 1 + 1749 Transport ATP-binding protein CydD Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229932.peg.1586 CDS AEJN02000073.1 28457 30091 2 + 1635 ABC transporter ATP-binding protein - none -
fig|6666666.229932.peg.1587 CDS AEJN02000073.1 30822 30202 -3 - 621 Unsaturated fatty acid biosythesis repressor FabR, TetR family - none -
fig|6666666.229932.peg.1588 CDS AEJN02000073.1 31733 30834 -2 - 900 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229932.peg.1589 CDS AEJN02000073.1 31892 32620 2 + 729 Peroxiredoxin family protein/glutaredoxin - none -
fig|6666666.229932.peg.1590 CDS AEJN02000073.1 32896 32681 -1 - 216 Protein SlyX - none -
fig|6666666.229932.peg.1591 CDS AEJN02000073.1 32991 33716 3 + 726 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229932.peg.1592 CDS AEJN02000073.1 33796 34464 1 + 669 YheO-like PAS domain - none -
fig|6666666.229932.peg.1593 CDS AEJN02000073.1 34468 34845 1 + 378 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229932.peg.1594 CDS AEJN02000073.1 34842 35204 3 + 363 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC CBSS-326442.4.peg.1852;
Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229932.peg.1595 CDS AEJN02000073.1 35207 35494 2 + 288 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB Sulfite reduction-associated complex DsrMKJOP and co-clustering genes;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229932.peg.1596 CDS AEJN02000073.1 36266 35499 -2 - 768 ABC-type polar amino acid transport system, ATPase component CBSS-326442.4.peg.1852
fig|6666666.229932.peg.1597 CDS AEJN02000073.1 36998 36276 -2 - 723 L-Cystine ABC transporter, permease protein TcyB - none -
fig|6666666.229932.peg.1598 CDS AEJN02000073.1 37761 36982 -3 - 780 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - none -
fig|6666666.229932.peg.1599 CDS AEJN02000073.1 39182 37887 -2 - 1296 Glycine/D-amino acid oxidases (deaminating) - none -
fig|6666666.229932.peg.1600 CDS AEJN02000073.1 39273 39151 -3 - 123 hypothetical protein - none -
fig|6666666.229932.peg.1601 CDS AEJN02000073.1 40069 39344 -1 - 726 lipoprotein, putative - none -
fig|6666666.229932.peg.1602 CDS AEJN02000073.1 40238 40116 -2 - 123 hypothetical protein - none -
fig|6666666.229932.peg.1603 CDS AEJN02000073.1 40432 40650 1 + 219 hypothetical protein - none -
fig|6666666.229932.peg.1604 CDS AEJN02000073.1 41821 40859 -1 - 963 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229932.peg.1605 CDS AEJN02000073.1 42524 41886 -2 - 639 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229932.peg.1606 CDS AEJN02000073.1 42869 42570 -2 - 300 Proposed lipoate regulatory protein YbeD Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229932.peg.1607 CDS AEJN02000073.1 44109 42919 -3 - 1191 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases;
Peptidoglycan Biosynthesis
fig|6666666.229932.peg.1608 CDS AEJN02000073.1 44997 44140 -3 - 858 Rare lipoprotein A precursor Peptidoglycan Biosynthesis
fig|6666666.229932.peg.1609 CDS AEJN02000073.1 46167 45046 -3 - 1122 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Peptidoglycan Biosynthesis
fig|6666666.229932.peg.1610 CDS AEJN02000073.1 48115 46154 -1 - 1962 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
CBSS-83331.1.peg.3039;
Peptidoglycan Biosynthesis
fig|6666666.229932.peg.1611 CDS AEJN02000073.1 48664 48128 -1 - 537 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229932.peg.1612 CDS AEJN02000073.1 48963 48655 -3 - 309 Iojap protein - none -
fig|6666666.229932.peg.1613 CDS AEJN02000073.1 50286 49030 -3 - 1257 ATP-dependent RNA helicase RhlB - none -
fig|6666666.229932.peg.1614 CDS AEJN02000073.1 50611 51849 1 + 1239 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229932.peg.1615 CDS AEJN02000073.1 53286 53426 3 + 141 hypothetical protein - none -
fig|6666666.229932.peg.1616 CDS AEJN02000073.1 53665 53435 -1 - 231 Acyl carrier protein Fatty Acid Biosynthesis FASII;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.1617 CDS AEJN02000073.1 54666 53938 -3 - 729 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Fatty Acid Biosynthesis FASII
fig|6666666.229932.peg.1618 CDS AEJN02000073.1 55629 54691 -3 - 939 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) Fatty Acid Biosynthesis FASII
fig|6666666.229932.peg.1619 CDS AEJN02000073.1 56686 55736 -1 - 951 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229932.peg.1620 CDS AEJN02000073.1 57741 56719 -3 - 1023 Phosphate:acyl-ACP acyltransferase PlsX Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.1621 CDS AEJN02000073.1 57938 57768 -2 - 171 LSU ribosomal protein L32p - none -
fig|6666666.229932.peg.1622 CDS AEJN02000073.1 58479 57955 -3 - 525 COG1399 protein, clustered with ribosomal protein L32p - none -
fig|6666666.229932.peg.1623 CDS AEJN02000073.1 59192 58551 -2 - 642 Dethiobiotin synthetase (EC 6.3.3.3) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229932.peg.1624 CDS AEJN02000073.1 59653 59192 -1 - 462 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229932.peg.1625 CDS AEJN02000073.1 59930 59631 -2 - 300 Biotin synthesis protein BioC Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229932.peg.1626 CDS AEJN02000073.1 60529 59948 -1 - 582 Biotin synthesis protein BioG Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229932.peg.1627 CDS AEJN02000073.1 61754 60579 -2 - 1176 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229932.peg.1628 CDS AEJN02000073.1 63036 61747 -3 - 1290 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) Biotin biosynthesis;
Biotin biosynthesis Experimental;
Biotin synthesis cluster
fig|6666666.229932.peg.1629 CDS AEJN02000073.1 63257 64126 2 + 870 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.1630 CDS AEJN02000073.1 64153 64785 1 + 633 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229932.peg.1631 CDS AEJN02000073.1 65091 64849 -3 - 243 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229932.peg.1632 CDS AEJN02000073.1 65474 65085 -2 - 390 Glutamate 5-kinase (EC 2.7.2.11) Proline Synthesis
fig|6666666.229932.peg.1633 CDS AEJN02000073.1 65746 65597 -1 - 150 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA Proline Synthesis;
Proline Synthesis
fig|6666666.229932.peg.1634 CDS AEJN02000073.1 65804 66445 2 + 642 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229932.peg.1635 CDS AEJN02000073.1 66454 66588 1 + 135 FIG023911: putative membrane protein CBSS-316275.9.peg.382
fig|6666666.229932.peg.1636 CDS AEJN02000073.1 66590 66946 2 + 357 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229932.peg.1637 CDS AEJN02000073.1 66906 67052 3 + 147 FIG001826: putative inner membrane protein CBSS-316275.9.peg.382
fig|6666666.229932.peg.1638 CDS AEJN02000073.1 67092 67577 3 + 486 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229932.peg.1639 CDS AEJN02000073.1 68057 67926 -2 - 132 hypothetical protein - none -
fig|6666666.229932.peg.1640 CDS AEJN02000073.1 68293 68451 1 + 159 hypothetical protein - none -
fig|6666666.229932.peg.1641 CDS AEJN02000074.1 2821 1058 -1 - 1764 Probable phospholipase protein - none -
fig|6666666.229932.peg.1642 CDS AEJN02000074.1 3027 2869 -3 - 159 Probable phospholipase protein - none -
fig|6666666.229932.peg.1643 CDS AEJN02000075.1 650 93 -2 - 558 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229932.peg.1644 CDS AEJN02000075.1 846 1883 3 + 1038 Methionine ABC transporter ATP-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229932.peg.1645 CDS AEJN02000075.1 1873 2550 1 + 678 Methionine ABC transporter permease protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229932.peg.1646 CDS AEJN02000075.1 2585 3427 2 + 843 Methionine ABC transporter substrate-binding protein Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229932.peg.1647 CDS AEJN02000075.1 3532 4029 1 + 498 Phospholipid-binding protein - none -
fig|6666666.229932.peg.1648 CDS AEJN02000075.1 4148 4624 2 + 477 tRNA (cytidine(34)-2@1-O)-methyltransferase (EC 2.1.1.207) Biotin synthesis cluster;
RNA methylation
fig|6666666.229932.peg.1649 CDS AEJN02000075.1 5595 4720 -3 - 876 Membrane protein LAPB - none -
fig|6666666.229932.peg.1650 CDS AEJN02000075.1 5718 5605 -3 - 114 hypothetical protein - none -
fig|6666666.229932.peg.1651 CDS AEJN02000075.1 5728 6342 1 + 615 GTP-binding protein EngB Universal GTPases
fig|6666666.229932.peg.1652 CDS AEJN02000075.1 6457 7992 1 + 1536 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.229932.peg.1653 CDS AEJN02000075.1 8357 8004 -2 - 354 Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase CBSS-224911.1.peg.435;
Phosphoglycerate mutase protein family
fig|6666666.229932.peg.1654 CDS AEJN02000075.1 10041 8824 -3 - 1218 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP CBSS-224911.1.peg.435;
Glutaredoxins;
Phosphoglycerate mutase protein family
fig|6666666.229932.peg.1655 CDS AEJN02000075.1 11950 10292 -1 - 1659 Phosphoglucosamine mutase (EC 5.4.2.10) Sialic Acid Metabolism;
UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis
fig|6666666.229932.peg.1656 CDS AEJN02000075.1 12256 12939 1 + 684 Phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229932.peg.1657 CDS AEJN02000076.1 2035 104 -1 - 1932 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229932.peg.1658 CDS AEJN02000076.1 2275 3150 1 + 876 Ribulosamine/erythrulosamine 3-kinase potentially involved in protein deglycation Protein deglycation
fig|6666666.229932.peg.1659 CDS AEJN02000076.1 3696 3418 -3 - 279 Ethidium bromide-methyl viologen resistance protein EmrE - none -
fig|6666666.229932.peg.1660 CDS AEJN02000076.1 4858 3914 -1 - 945 Hydroxypyruvate reductase (EC 1.1.1.81) Glycerate metabolism;
Glycolate, glyoxylate interconversions
fig|6666666.229932.peg.1661 CDS AEJN02000076.1 5256 5014 -3 - 243 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229932.peg.1662 CDS AEJN02000076.1 5622 6596 3 + 975 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229932.peg.1663 CDS AEJN02000076.1 6599 7189 2 + 591 Aminodeoxychorismate lyase (EC 4.1.3.38) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis;
Tryptophan synthesis
fig|6666666.229932.peg.1664 CDS AEJN02000077.1 1606 533 -1 - 1074 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229932.peg.1665 CDS AEJN02000077.1 1734 3017 3 + 1284 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461;
Heme and Siroheme Biosynthesis
fig|6666666.229932.peg.1666 CDS AEJN02000077.1 4922 3093 -2 - 1830 [Protein-PII] uridylyltransferase (EC 2.7.7.59) Ammonia assimilation;
CBSS-312309.3.peg.1965
fig|6666666.229932.peg.1667 CDS AEJN02000078.1 425 117 -2 - 309 Mobile element protein - none -
fig|6666666.229932.peg.1668 CDS AEJN02000078.1 604 470 -1 - 135 hypothetical protein - none -
fig|6666666.229932.peg.1669 CDS AEJN02000078.1 902 609 -2 - 294 hypothetical protein - none -
fig|6666666.229932.peg.1670 CDS AEJN02000078.1 1471 1154 -1 - 318 hypothetical protein - none -
fig|6666666.229932.peg.1671 CDS AEJN02000078.1 5074 3845 -1 - 1230 hypothetical protein - none -
fig|6666666.229932.peg.1672 CDS AEJN02000078.1 5379 5215 -3 - 165 hypothetical protein - none -
fig|6666666.229932.peg.1673 CDS AEJN02000078.1 6052 5546 -1 - 507 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon);
Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229932.peg.1674 CDS AEJN02000078.1 6750 6265 -3 - 486 Putative membrane protein - none -
fig|6666666.229932.peg.1675 CDS AEJN02000078.1 7358 6753 -2 - 606 Galactoside O-acetyltransferase (EC 2.3.1.18) Lactose utilization
fig|6666666.229932.peg.1676 CDS AEJN02000078.1 7960 7358 -1 - 603 Putative phosphatase YqaB 2-phosphoglycolate salvage
fig|6666666.229932.peg.1677 CDS AEJN02000078.1 8088 8468 3 + 381 FIG00782409: hypothetical protein - none -
fig|6666666.229932.peg.1678 CDS AEJN02000078.1 10999 8984 -1 - 2016 ATP-dependent DNA helicase Rep DNA repair, bacterial UvrD and related helicases
fig|6666666.229932.peg.1679 CDS AEJN02000078.1 11239 11009 -1 - 231 FIG00696102: hypothetical protein - none -
fig|6666666.229932.peg.1680 CDS AEJN02000078.1 11906 11343 -2 - 564 Outer membrane protein 18/16 - none -
fig|6666666.229932.peg.1681 CDS AEJN02000078.1 12123 14924 3 + 2802 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229932.peg.1682 CDS AEJN02000078.1 15430 17850 1 + 2421 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.5.3) - none -
fig|6666666.229932.peg.1683 CDS AEJN02000078.1 17861 18478 2 + 618 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) Anaerobic respiratory reductases
fig|6666666.229932.peg.1684 CDS AEJN02000078.1 18480 19319 3 + 840 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.5.3) - none -
fig|6666666.229932.peg.1685 CDS AEJN02000078.1 19353 19967 3 + 615 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD - none -
fig|6666666.229932.peg.1686 CDS AEJN02000078.1 19981 20190 1 + 210 Ferredoxin-type protein NapF (periplasmic nitrate reductase) - none -
fig|6666666.229932.peg.1687 CDS AEJN02000078.1 20335 21240 1 + 906 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229932.peg.1688 CDS AEJN02000078.1 21290 21550 2 + 261 Glutaredoxin-related protein Glutaredoxins
fig|6666666.229932.peg.1689 CDS AEJN02000078.1 21590 21898 2 + 309 FIG074102: hypothetical protein - none -
fig|6666666.229932.peg.1690 CDS AEJN02000078.1 22020 22358 3 + 339 FIG074102: hypothetical protein - none -
fig|6666666.229932.peg.1691 CDS AEJN02000078.1 22495 22629 1 + 135 hypothetical protein - none -
fig|6666666.229932.peg.1692 CDS AEJN02000078.1 22677 24545 3 + 1869 ATPase family protein - none -
fig|6666666.229932.peg.1693 CDS AEJN02000078.1 24538 26649 1 + 2112 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) Glycyl-tRNA synthetase;
Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229932.peg.1694 CDS AEJN02000078.1 28352 26718 -2 - 1635 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster;
pyrimidine conversions
fig|6666666.229932.peg.1695 CDS AEJN02000078.1 28587 29888 3 + 1302 Branched-chain amino acid transport system carrier protein - none -
fig|6666666.229932.peg.1696 CDS AEJN02000078.1 30067 30198 1 + 132 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) Riboflavin synthesis cluster
fig|6666666.229932.peg.1697 CDS AEJN02000078.1 30969 30385 -3 - 585 NfuA Fe-S protein maturation Biotin biosynthesis Experimental;
DNA uptake cluster
fig|6666666.229932.peg.1698 CDS AEJN02000078.1 31767 31081 -3 - 687 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental;
Biotin synthesis cluster;
CBSS-216591.1.peg.168
fig|6666666.229932.peg.1699 CDS AEJN02000078.1 31913 32725 2 + 813 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) - none -
fig|6666666.229932.peg.1700 CDS AEJN02000078.1 32909 34021 2 + 1113 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229932.peg.1701 CDS AEJN02000078.1 34676 34095 -2 - 582 Late competence protein ComEA, DNA receptor - none -
fig|6666666.229932.peg.1702 CDS AEJN02000078.1 34941 37511 3 + 2571 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229932.peg.1703 CDS AEJN02000078.1 38112 37612 -3 - 501 hypothetical protein - none -
fig|6666666.229932.peg.1704 CDS AEJN02000078.1 38295 39323 3 + 1029 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) - none -
fig|6666666.229932.peg.1705 CDS AEJN02000078.1 39323 39502 2 + 180 hypothetical protein - none -
fig|6666666.229932.peg.1706 CDS AEJN02000078.1 39581 40405 2 + 825 Diaminopimelate epimerase (EC 5.1.1.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229932.peg.1707 CDS AEJN02000078.1 40415 41305 2 + 891 Tyrosine recombinase XerC - none -
fig|6666666.229932.peg.1708 CDS AEJN02000078.1 41320 42033 1 + 714 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229932.peg.1709 CDS AEJN02000078.1 42560 42135 -2 - 426 Excinuclease ATPase subunit - none -
fig|6666666.229932.peg.1710 CDS AEJN02000078.1 42941 43684 2 + 744 3-oxoacyl-[ACP] synthase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1711 CDS AEJN02000078.1 43669 44457 1 + 789 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1712 CDS AEJN02000078.1 44435 44698 2 + 264 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1713 CDS AEJN02000078.1 44701 44952 1 + 252 Acyl carrier protein (ACP2) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1714 CDS AEJN02000078.1 44952 46619 3 + 1668 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1715 CDS AEJN02000078.1 46645 47190 1 + 546 FIG017861: hypothetical protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1716 CDS AEJN02000078.1 47187 48548 3 + 1362 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1717 CDS AEJN02000078.1 48548 49270 2 + 723 FIG143263: Glycosyl transferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1718 CDS AEJN02000078.1 49267 50193 1 + 927 Lysophospholipid acyltransferase Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1719 CDS AEJN02000078.1 50190 50636 3 + 447 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1720 CDS AEJN02000078.1 50633 51217 2 + 585 FIG027190: Putative transmembrane protein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1721 CDS AEJN02000078.1 51224 53497 2 + 2274 FIG021862: membrane protein, exporter Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1722 CDS AEJN02000078.1 53537 54106 2 + 570 FIG085779: Lipoprotein Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1723 CDS AEJN02000078.1 54115 55338 1 + 1224 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1724 CDS AEJN02000078.1 55331 55774 2 + 444 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1725 CDS AEJN02000078.1 55824 56552 3 + 729 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1726 CDS AEJN02000078.1 56583 57827 3 + 1245 FIG138576: 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) Phospholipid and Fatty acid biosynthesis related cluster
fig|6666666.229932.peg.1727 CDS AEJN02000079.1 1618 74 -1 - 1545 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE Copper homeostasis: copper tolerance;
Lipoprotein Biosynthesis;
tRNA-methylthiotransferase containing cluster;
tRNA-methylthiotransferase containing cluster
fig|6666666.229932.peg.1728 CDS AEJN02000079.1 2980 2084 -1 - 897 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Copper homeostasis: copper tolerance;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport;
tRNA-methylthiotransferase containing cluster
fig|6666666.229932.peg.1729 CDS AEJN02000079.1 4449 5456 3 + 1008 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) Citrate Metabolism, Transport, and Regulation
fig|6666666.229932.peg.1730 CDS AEJN02000079.1 5495 5782 2 + 288 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation;
TCA Cycle
fig|6666666.229932.peg.1731 CDS AEJN02000079.1 5779 6654 1 + 876 Citrate lyase beta chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229932.peg.1732 CDS AEJN02000079.1 6669 8171 3 + 1503 Citrate lyase alpha chain (EC 4.1.3.6) Citrate Metabolism, Transport, and Regulation
fig|6666666.229932.peg.1733 CDS AEJN02000079.1 8364 9776 3 + 1413 2-(5@1@1-triphosphoribosyl)-3@1-dephosphocoenzyme-A synthase (EC 2.7.8.25) Citrate Metabolism, Transport, and Regulation
fig|6666666.229932.peg.1734 CDS AEJN02000079.1 9763 11196 1 + 1434 2-oxoglutarate/malate translocator - none -
fig|6666666.229932.peg.1735 CDS AEJN02000079.1 11475 12974 3 + 1500 Putative ATP /GTP binding protein - none -
fig|6666666.229932.peg.1736 CDS AEJN02000079.1 14270 13239 -2 - 1032 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229932.peg.1737 CDS AEJN02000079.1 15418 14264 -1 - 1155 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229932.peg.1738 CDS AEJN02000079.1 16529 15486 -2 - 1044 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) Lactose and Galactose Uptake and Utilization
fig|6666666.229932.peg.1739 CDS AEJN02000079.1 16771 17784 1 + 1014 Galactose operon repressor, GalR-LacI family of transcriptional regulators Lactose and Galactose Uptake and Utilization
fig|6666666.229932.peg.1740 CDS AEJN02000079.1 17999 18991 2 + 993 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) Bacterial Chemotaxis;
Lactose and Galactose Uptake and Utilization
fig|6666666.229932.peg.1741 CDS AEJN02000079.1 19066 20604 1 + 1539 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) Lactose and Galactose Uptake and Utilization
fig|6666666.229932.peg.1742 CDS AEJN02000079.1 20623 21633 1 + 1011 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) Lactose and Galactose Uptake and Utilization
fig|6666666.229932.peg.1743 CDS AEJN02000079.1 23555 21708 -2 - 1848 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) - none -
fig|6666666.229932.peg.1744 CDS AEJN02000079.1 23581 23715 1 + 135 hypothetical protein - none -
fig|6666666.229932.peg.1745 CDS AEJN02000079.1 24916 23696 -1 - 1221 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) Fatty Acid Biosynthesis FASII
fig|6666666.229932.peg.1746 CDS AEJN02000079.1 25086 27104 3 + 2019 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) CBSS-354.1.peg.876;
RNA methylation;
Riboflavin, FMN and FAD metabolism in plants;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229932.peg.1747 CDS AEJN02000079.1 27294 28349 3 + 1056 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229932.peg.1748 CDS AEJN02000080.1 42 1184 3 + 1143 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229932.peg.1749 CDS AEJN02000081.1 212 499 2 + 288 hypothetical protein - none -
fig|6666666.229932.peg.1750 CDS AEJN02000082.1 257 1633 2 + 1377 Tryptophanase (EC 4.1.99.1) - none -
fig|6666666.229932.peg.1751 CDS AEJN02000082.1 1795 3009 1 + 1215 Tyrosine-specific transport protein - none -
fig|6666666.229932.peg.1752 CDS AEJN02000082.1 3752 3075 -2 - 678 YheO-like PAS domain - none -
fig|6666666.229932.peg.1753 CDS AEJN02000082.1 4321 3815 -1 - 507 Arabinose efflux permease - none -
fig|6666666.229932.peg.1754 CDS AEJN02000082.1 5045 4314 -2 - 732 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) KDO2-Lipid A biosynthesis;
Llipid A biosynthesis cluster
fig|6666666.229932.peg.1755 CDS AEJN02000082.1 5156 5899 2 + 744 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.1756 CDS AEJN02000082.1 5907 7319 3 + 1413 Putative cell division protein precursor - none -
fig|6666666.229932.peg.1757 CDS AEJN02000082.1 8259 7360 -3 - 900 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229932.peg.1758 CDS AEJN02000082.1 9141 8401 -3 - 741 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229932.peg.1759 CDS AEJN02000082.1 11597 9285 -2 - 2313 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229932.peg.1760 CDS AEJN02000082.1 12547 11696 -1 - 852 Formate efflux transporter (TC 2.A.44 family) Fermentations: Mixed acid
fig|6666666.229932.peg.1761 CDS AEJN02000082.1 12860 13210 2 + 351 Bis(5@1-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) pyrimidine conversions
fig|6666666.229932.peg.1762 CDS AEJN02000082.1 13211 13564 2 + 354 Predicted periplasmic lipoprotein - none -
fig|6666666.229932.peg.1763 CDS AEJN02000082.1 13566 14612 3 + 1047 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) Murein Hydrolases;
Recycling of Peptidoglycan Amino Sugars
fig|6666666.229932.peg.1764 CDS AEJN02000082.1 14614 15540 1 + 927 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229932.peg.1765 CDS AEJN02000082.1 15624 15785 3 + 162 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) RNA methylation
fig|6666666.229932.peg.1766 CDS AEJN02000082.1 16850 15885 -2 - 966 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229932.peg.1767 CDS AEJN02000082.1 17832 16912 -3 - 921 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229932.peg.1768 CDS AEJN02000082.1 18398 17832 -2 - 567 FIG00696199: hypothetical protein - none -
fig|6666666.229932.peg.1769 CDS AEJN02000082.1 19741 19142 -1 - 600 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229932.peg.1770 CDS AEJN02000082.1 20027 20410 2 + 384 Pyruvate formate-lyase (EC 2.3.1.54) Butanol Biosynthesis;
Fermentations: Mixed acid
fig|6666666.229932.peg.1771 CDS AEJN02000082.1 20580 22376 3 + 1797 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229932.peg.1772 CDS AEJN02000082.1 22387 23409 1 + 1023 Signal peptidase I (EC 3.4.21.89) CBSS-176299.4.peg.1292;
Signal peptidase
fig|6666666.229932.peg.1773 CDS AEJN02000082.1 23416 24096 1 + 681 Ribonuclease III (EC 3.1.26.3) CBSS-176299.4.peg.1292;
RNA processing and degradation, bacterial
fig|6666666.229932.peg.1774 CDS AEJN02000082.1 24093 25001 3 + 909 GTP-binding protein Era Bacterial Cell Division;
CBSS-176299.4.peg.1292;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.229932.peg.1775 CDS AEJN02000082.1 26460 25105 -3 - 1356 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria;
tRNAmodification position 34
fig|6666666.229932.peg.1776 CDS AEJN02000082.1 28178 26589 -2 - 1590 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229932.peg.1777 CDS AEJN02000082.1 28483 28220 -1 - 264 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229932.peg.1778 CDS AEJN02000082.1 28569 28438 -3 - 132 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229932.peg.1779 CDS AEJN02000082.1 28953 28819 -3 - 135 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229932.peg.1780 CDS AEJN02000082.1 29371 30732 1 + 1362 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229932.peg.1781 CDS AEJN02000082.1 30743 31843 2 + 1101 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229932.peg.1782 CDS AEJN02000082.1 31847 32923 2 + 1077 DNA recombination and repair protein RecF Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229932.peg.1783 CDS AEJN02000082.1 33725 32970 -2 - 756 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis;
Ubiquinone Biosynthesis
fig|6666666.229932.peg.1784 CDS AEJN02000082.1 33913 34488 1 + 576 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229932.peg.1785 CDS AEJN02000082.1 35035 34685 -1 - 351 Transcriptional regulator, XRE family - none -
fig|6666666.229932.peg.1786 CDS AEJN02000082.1 35431 35162 -1 - 270 hypothetical protein - none -
fig|6666666.229932.peg.1787 CDS AEJN02000082.1 36140 36778 2 + 639 NAD-dependent malic enzyme (EC 1.1.1.38) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229932.peg.1788 CDS AEJN02000082.1 38196 36997 -3 - 1200 NAD(FAD)-utilizing dehydrogenases - none -
fig|6666666.229932.peg.1789 CDS AEJN02000082.1 39035 38193 -2 - 843 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly - none -
fig|6666666.229932.peg.1790 CDS AEJN02000082.1 39730 39200 -1 - 531 Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly - none -
fig|6666666.229932.peg.1791 CDS AEJN02000082.1 41633 39723 -2 - 1911 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly - none -
fig|6666666.229932.peg.1792 CDS AEJN02000082.1 41655 41978 3 + 324 hypothetical protein - none -
fig|6666666.229932.peg.1793 CDS AEJN02000082.1 43186 42221 -1 - 966 NrfD protein - none -
fig|6666666.229932.peg.1794 CDS AEJN02000082.1 43860 43183 -3 - 678 NrfC protein - none -
fig|6666666.229932.peg.1795 CDS AEJN02000082.1 44573 43857 -2 - 717 Cytochrome c-type protein NrfB precursor - none -
fig|6666666.229932.peg.1796 CDS AEJN02000082.1 46119 44596 -3 - 1524 Cytochrome c552 precursor (EC 1.7.2.2) Soluble cytochromes and functionally related electron carriers
fig|6666666.229932.peg.1797 CDS AEJN02000082.1 46986 46696 -3 - 291 hypothetical protein - none -
fig|6666666.229932.peg.1798 CDS AEJN02000082.1 47132 47004 -2 - 129 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229932.peg.1799 CDS AEJN02000082.1 47552 47142 -2 - 411 Parvulin-like peptidyl-prolyl isomerase - none -
fig|6666666.229932.peg.1800 CDS AEJN02000082.1 48685 47762 -1 - 924 Cytochrome c heme lyase subunit CcmH Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229932.peg.1801 CDS AEJN02000082.1 49236 48685 -3 - 552 Cytochrome c heme lyase subunit CcmL Biogenesis of c-type cytochromes
fig|6666666.229932.peg.1802 CDS AEJN02000082.1 49781 49236 -2 - 546 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229932.peg.1803 CDS AEJN02000082.1 51768 49810 -3 - 1959 Cytochrome c heme lyase subunit CcmF Biogenesis of c-type cytochromes;
Copper homeostasis
fig|6666666.229932.peg.1804 CDS AEJN02000082.1 52286 51768 -2 - 519 Cytochrome c-type biogenesis protein CcmE, heme chaperone Biogenesis of c-type cytochromes
fig|6666666.229932.peg.1805 CDS AEJN02000082.1 52456 52283 -1 - 174 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Biogenesis of c-type cytochromes
fig|6666666.229932.peg.1806 CDS AEJN02000082.1 53244 52507 -3 - 738 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Biogenesis of c-type cytochromes
fig|6666666.229932.peg.1807 CDS AEJN02000082.1 53920 53255 -1 - 666 ABC transporter involved in cytochrome c biogenesis, CcmB subunit Biogenesis of c-type cytochromes
fig|6666666.229932.peg.1808 CDS AEJN02000082.1 54560 53925 -2 - 636 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Biogenesis of c-type cytochromes
fig|6666666.229932.peg.1809 CDS AEJN02000082.1 55925 54732 -2 - 1194 Bicyclomycin resistance protein - none -
fig|6666666.229932.peg.1810 CDS AEJN02000082.1 56631 55930 -3 - 702 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229932.peg.1811 CDS AEJN02000084.1 1040 105 -2 - 936 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229932.peg.1812 CDS AEJN02000084.1 1699 1049 -1 - 651 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229932.peg.1813 CDS AEJN02000084.1 3114 1738 -3 - 1377 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229932.peg.1814 CDS AEJN02000084.1 3202 3786 1 + 585 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229932.peg.1815 CDS AEJN02000084.1 4213 4070 -1 - 144 hypothetical protein - none -
fig|6666666.229932.peg.1816 CDS AEJN02000084.1 4398 5030 3 + 633 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) Mannose Metabolism;
Mannose Metabolism;
Sialic Acid Metabolism;
Sialic Acid Metabolism
fig|6666666.229932.peg.1817 CDS AEJN02000084.1 5048 5845 2 + 798 PTS system, mannose-specific IIC component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229932.peg.1818 CDS AEJN02000084.1 5859 6695 3 + 837 PTS system, mannose-specific IID component (EC 2.7.1.69) Mannose Metabolism;
Sialic Acid Metabolism
fig|6666666.229932.peg.1819 CDS AEJN02000084.1 6805 7785 1 + 981 Cof protein - none -
fig|6666666.229932.peg.1820 CDS AEJN02000084.1 7846 7980 1 + 135 Cof protein - none -
fig|6666666.229932.peg.1821 CDS AEJN02000084.1 8271 9521 3 + 1251 Na+ dependent nucleoside transporter NupC Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229932.peg.1822 CDS AEJN02000084.1 9647 10366 2 + 720 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions;
pyrimidine conversions
fig|6666666.229932.peg.1823 CDS AEJN02000084.1 10384 10527 1 + 144 hypothetical protein - none -
fig|6666666.229932.peg.1824 CDS AEJN02000084.1 10669 13056 1 + 2388 Biofilm PGA outer membrane secretin PgaA Biofilm Adhesin Biosynthesis
fig|6666666.229932.peg.1825 CDS AEJN02000084.1 13072 14988 1 + 1917 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) Biofilm Adhesin Biosynthesis
fig|6666666.229932.peg.1826 CDS AEJN02000084.1 14997 16232 3 + 1236 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) Biofilm Adhesin Biosynthesis
fig|6666666.229932.peg.1827 CDS AEJN02000084.1 16235 16528 2 + 294 AagD - none -
fig|6666666.229932.peg.1828 CDS AEJN02000084.1 16618 16496 -1 - 123 hypothetical protein - none -
fig|6666666.229932.peg.1829 CDS AEJN02000084.1 17971 16646 -1 - 1326 Hexose phosphate uptake regulatory protein UhpC - none -
fig|6666666.229932.peg.1830 CDS AEJN02000084.1 18142 18774 1 + 633 Pyridoxamine 5@1-phosphate oxidase (EC 1.4.3.5) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229932.peg.1831 CDS AEJN02000084.1 18866 18726 -2 - 141 hypothetical protein - none -
fig|6666666.229932.peg.1832 CDS AEJN02000084.1 18969 19223 3 + 255 hypothetical protein - none -
fig|6666666.229932.peg.1833 CDS AEJN02000085.1 680 63 -2 - 618 transcriptional regulator, putative - none -
fig|6666666.229932.peg.1834 CDS AEJN02000085.1 1077 964 -3 - 114 hypothetical protein - none -
fig|6666666.229932.peg.1835 CDS AEJN02000085.1 2587 1199 -1 - 1389 Putative protease - none -
fig|6666666.229932.peg.1836 CDS AEJN02000085.1 3202 2759 -1 - 444 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229932.peg.1837 CDS AEJN02000085.1 3543 3881 3 + 339 conserved hypothetical protein - none -
fig|6666666.229932.peg.1838 CDS AEJN02000085.1 4233 3943 -3 - 291 RelE/StbE replicon stabilization toxin Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.1839 CDS AEJN02000085.1 4477 4223 -1 - 255 RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.1840 CDS AEJN02000085.1 5690 4929 -2 - 762 DNA polymerase III epsilon subunit (EC 2.7.7.7) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536
fig|6666666.229932.peg.1841 CDS AEJN02000085.1 5758 5880 1 + 123 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229932.peg.1842 CDS AEJN02000085.1 5877 6224 3 + 348 Ribonuclease HI (EC 3.1.26.4) CBSS-228410.1.peg.134;
CBSS-342610.3.peg.1536;
Ribonuclease H
fig|6666666.229932.peg.1843 CDS AEJN02000085.1 7643 6312 -2 - 1332 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229932.peg.1844 CDS AEJN02000085.1 8814 7654 -3 - 1161 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) @ Histidinol-phosphate aminotransferase (EC 2.6.1.9) Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229932.peg.1845 CDS AEJN02000085.1 9908 8826 -2 - 1083 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229932.peg.1846 CDS AEJN02000085.1 10083 9967 -3 - 117 hypothetical protein - none -
fig|6666666.229932.peg.1847 CDS AEJN02000085.1 10108 10440 1 + 333 UPF0265 protein YeeX Broadly distributed proteins not in subsystems
fig|6666666.229932.peg.1848 CDS AEJN02000085.1 12184 10595 -1 - 1590 L-lactate permease Lactate utilization
fig|6666666.229932.peg.1849 CDS AEJN02000085.1 13572 12427 -3 - 1146 L-lactate dehydrogenase (EC 1.1.2.3) Lactate utilization;
Respiratory dehydrogenases 1
fig|6666666.229932.peg.1850 CDS AEJN02000085.1 14019 13873 -3 - 147 hypothetical protein - none -
fig|6666666.229932.peg.1851 CDS AEJN02000085.1 15146 14196 -2 - 951 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
Pentose phosphate pathway;
Transcription repair cluster
fig|6666666.229932.peg.1852 CDS AEJN02000085.1 16098 15187 -3 - 912 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229932.peg.1853 CDS AEJN02000085.1 16721 16095 -2 - 627 Outer membrane lipoprotein LolB A Gammaproteobacteria Cluster Relating to Translation;
Lipopolysaccharide assembly;
Lipoprotein sorting system
fig|6666666.229932.peg.1854 CDS AEJN02000085.1 18060 16783 -3 - 1278 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) Polyadenylation bacterial;
tRNA nucleotidyltransferase
fig|6666666.229932.peg.1855 CDS AEJN02000085.1 18671 18060 -2 - 612 SH3 domain protein - none -
fig|6666666.229932.peg.1856 CDS AEJN02000085.1 20005 18740 -1 - 1266 Probable low-affinity inorganic phosphate transporter Phosphate metabolism
fig|6666666.229932.peg.1857 CDS AEJN02000085.1 20711 20031 -2 - 681 Phosphate transport regulator (distant homolog of PhoU) Phosphate metabolism
fig|6666666.229932.peg.1858 CDS AEJN02000085.1 20876 22030 2 + 1155 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229932.peg.1859 CDS AEJN02000085.1 22033 23406 1 + 1374 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229932.peg.1860 CDS AEJN02000085.1 23767 23654 -1 - 114 hypothetical protein - none -
fig|6666666.229932.peg.1861 CDS AEJN02000085.1 24498 23854 -3 - 645 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229932.peg.1862 CDS AEJN02000085.1 25920 24631 -3 - 1290 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229932.peg.1863 CDS AEJN02000085.1 26268 25927 -3 - 342 [NiFe] hydrogenase nickel incorporation protein HybF NiFe hydrogenase maturation
fig|6666666.229932.peg.1864 CDS AEJN02000085.1 27290 26274 -2 - 1017 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229932.peg.1865 CDS AEJN02000085.1 27484 27870 1 + 387 Integral membrane protein - none -
fig|6666666.229932.peg.1866 CDS AEJN02000085.1 27995 29326 2 + 1332 Guanine-hypoxanthine permease Purine Utilization
fig|6666666.229932.peg.1867 CDS AEJN02000085.1 30700 29354 -1 - 1347 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing;
tRNAmodification position 34
fig|6666666.229932.peg.1868 CDS AEJN02000085.1 31589 30732 -2 - 858 Pyridoxal kinase (EC 2.7.1.35) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229932.peg.1869 CDS AEJN02000085.1 32605 31652 -1 - 954 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229932.peg.1870 CDS AEJN02000085.1 33915 34193 3 + 279 Transthyretin-like periplasmic protein - none -
fig|6666666.229932.peg.1871 CDS AEJN02000085.1 34387 35337 1 + 951 hypothetical protein - none -
fig|6666666.229932.peg.1872 CDS AEJN02000085.1 37289 35730 -2 - 1560 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229932.peg.1873 CDS AEJN02000085.1 37587 37321 -3 - 267 YafQ toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.1874 CDS AEJN02000085.1 37871 37599 -2 - 273 DNA-damage-inducible protein J DNA repair, bacterial;
Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.1875 CDS AEJN02000085.1 38096 37911 -2 - 186 hypothetical protein - none -
fig|6666666.229932.peg.1876 CDS AEJN02000085.1 39478 38126 -1 - 1353 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) Citrate Metabolism, Transport, and Regulation
fig|6666666.229932.peg.1877 CDS AEJN02000085.1 39572 39718 2 + 147 hypothetical protein - none -
fig|6666666.229932.peg.1878 CDS AEJN02000085.1 40042 39854 -1 - 189 hypothetical protein - none -
fig|6666666.229932.peg.1879 CDS AEJN02000085.1 40155 40358 3 + 204 Mobile element protein - none -
fig|6666666.229932.peg.1880 CDS AEJN02000085.1 40365 40499 3 + 135 Mobile element protein - none -
fig|6666666.229932.peg.1881 CDS AEJN02000085.1 40530 40724 3 + 195 Mobile element protein - none -
fig|6666666.229932.peg.1882 CDS AEJN02000085.1 41338 40856 -1 - 483 Thiol:disulfide oxidoreductase associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229932.peg.1883 CDS AEJN02000085.1 41994 41353 -3 - 642 Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase Peptide methionine sulfoxide reductase
fig|6666666.229932.peg.1884 CDS AEJN02000085.1 43068 41998 -3 - 1071 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Cluster Ytf and putative sugar transporter;
Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase;
Putative sugar ABC transporter (ytf cluster)
fig|6666666.229932.peg.1885 CDS AEJN02000085.1 43285 43977 1 + 693 Carbonic anhydrase (EC 4.2.1.1) - none -
fig|6666666.229932.peg.1886 CDS AEJN02000085.1 44670 44083 -3 - 588 21 kDa hemolysin precursor CBSS-160492.1.peg.550
fig|6666666.229932.peg.1887 CDS AEJN02000085.1 45319 44735 -1 - 585 Phosphoheptose isomerase (EC 5.3.1.-) CBSS-160492.1.peg.550;
Capsular heptose biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229932.peg.1888 CDS AEJN02000085.1 45691 45332 -1 - 360 Predicted endonuclease distantly related to archaeal Holliday junction resolvase CBSS-160492.1.peg.550
fig|6666666.229932.peg.1889 CDS AEJN02000085.1 47419 45701 -1 - 1719 LppC putative lipoprotein CBSS-160492.1.peg.550
fig|6666666.229932.peg.1890 CDS AEJN02000085.1 47496 48344 3 + 849 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
CBSS-160492.1.peg.550;
Heat shock dnaK gene cluster extended
fig|6666666.229932.peg.1891 CDS AEJN02000085.1 48614 50203 2 + 1590 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Respiratory dehydrogenases 1
fig|6666666.229932.peg.1892 CDS AEJN02000085.1 50380 51717 1 + 1338 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1;
Riboflavin synthesis cluster
fig|6666666.229932.peg.1893 CDS AEJN02000085.1 52401 51811 -3 - 591 FMN-dependent NADH-azoreductase - none -
fig|6666666.229932.peg.1894 CDS AEJN02000085.1 52577 53635 2 + 1059 Possible protease sohB (EC 3.4.21.-) - none -
fig|6666666.229932.peg.1895 CDS AEJN02000085.1 53825 54649 2 + 825 Outer membrane protein A precursor Osmoregulation
fig|6666666.229932.peg.1896 CDS AEJN02000085.1 55325 54714 -2 - 612 Glutathione S-transferase (EC 2.5.1.18) Glutathione: Non-redox reactions
fig|6666666.229932.peg.1897 CDS AEJN02000085.1 55956 55609 -3 - 348 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229932.peg.1898 CDS AEJN02000085.1 57935 57801 -2 - 135 hypothetical protein - none -
fig|6666666.229932.peg.1899 CDS AEJN02000085.1 58182 58346 3 + 165 hypothetical protein - none -
fig|6666666.229932.peg.1900 CDS AEJN02000085.1 60283 58385 -1 - 1899 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229932.peg.1901 CDS AEJN02000085.1 60774 61661 3 + 888 putative adhesin/invasin - none -
fig|6666666.229932.peg.1902 CDS AEJN02000085.1 63411 61765 -3 - 1647 ABC transporter ATP-binding protein - none -
fig|6666666.229932.peg.1903 CDS AEJN02000085.1 63814 64479 1 + 666 putative exported protein - none -
fig|6666666.229932.peg.1904 CDS AEJN02000085.1 64494 65525 3 + 1032 putative membrane protein - none -
fig|6666666.229932.peg.1905 CDS AEJN02000085.1 66137 68179 2 + 2043 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229932.peg.1906 CDS AEJN02000085.1 68406 69476 3 + 1071 Outer membrane protein A precursor Osmoregulation
fig|6666666.229932.peg.1907 CDS AEJN02000085.1 71049 69667 -3 - 1383 Outer membrane stress sensor protease DegQ, serine protease Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229932.peg.1908 CDS AEJN02000085.1 71112 71282 3 + 171 hypothetical protein - none -
fig|6666666.229932.peg.1909 CDS AEJN02000085.1 71650 71240 -1 - 411 probable membrane protein YPO3565 - none -
fig|6666666.229932.peg.1910 CDS AEJN02000085.1 73583 71820 -2 - 1764 FIG00696060: hypothetical protein - none -
fig|6666666.229932.peg.1911 CDS AEJN02000085.1 74884 73679 -1 - 1206 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229932.peg.1912 CDS AEJN02000085.1 75060 75398 3 + 339 FIG00904093: hypothetical protein - none -
fig|6666666.229932.peg.1913 CDS AEJN02000087.1 179 36 -2 - 144 hypothetical protein - none -
fig|6666666.229932.peg.1914 CDS AEJN02000087.1 976 197 -1 - 780 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) Biogenesis of cytochrome c oxidases
fig|6666666.229932.peg.1915 CDS AEJN02000087.1 1352 1831 2 + 480 Translation initiation factor 3 Translation initiation factors bacterial
fig|6666666.229932.peg.1916 CDS AEJN02000087.1 2038 1832 -1 - 207 hypothetical protein - none -
fig|6666666.229932.peg.1917 CDS AEJN02000087.1 2307 2660 3 + 354 LSU ribosomal protein L20p - none -
fig|6666666.229932.peg.1918 CDS AEJN02000087.1 3637 4590 1 + 954 Tagatose 1,6-bisphosphate aldolase (EC 4.1.2.40) - none -
fig|6666666.229932.peg.1919 CDS AEJN02000087.1 4605 6806 3 + 2202 PTS system, galactitol-specific IIC component (EC 2.7.1.69) - none -
fig|6666666.229932.peg.1920 CDS AEJN02000087.1 6829 7809 1 + 981 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) - none -
fig|6666666.229932.peg.1921 CDS AEJN02000087.1 7876 8634 1 + 759 Galactitol utilization operon repressor - none -
fig|6666666.229932.peg.1922 CDS AEJN02000087.1 10596 8746 -3 - 1851 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229932.peg.1923 CDS AEJN02000087.1 11571 10681 -3 - 891 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229932.peg.1924 CDS AEJN02000087.1 11827 11582 -1 - 246 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229932.peg.1925 CDS AEJN02000087.1 12053 12949 2 + 897 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) Fatty Acid Biosynthesis FASII
fig|6666666.229932.peg.1926 CDS AEJN02000087.1 12972 14318 3 + 1347 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229932.peg.1927 CDS AEJN02000087.1 15016 14375 -1 - 642 Hypothetical, related to broad specificity phosphatases COG0406 CBSS-196164.1.peg.461
fig|6666666.229932.peg.1928 CDS AEJN02000087.1 16535 15078 -2 - 1458 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.1929 CDS AEJN02000087.1 17457 16549 -3 - 909 Putative surface protein - none -
fig|6666666.229932.peg.1930 CDS AEJN02000087.1 17588 18265 2 + 678 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229932.peg.1931 CDS AEJN02000087.1 18310 19173 1 + 864 Permease of the drug/metabolite transporter (DMT) superfamily Queuosine-Archaeosine Biosynthesis
fig|6666666.229932.peg.1932 CDS AEJN02000087.1 19256 19579 2 + 324 Alkylphosphonate utilization operon protein PhnA - none -
fig|6666666.229932.peg.1933 CDS AEJN02000087.1 19722 21236 3 + 1515 Esterase/lipase - none -
fig|6666666.229932.peg.1934 CDS AEJN02000087.1 22864 21491 -1 - 1374 RND efflux system, outer membrane lipoprotein CmeC Multidrug Resistance Efflux Pumps
fig|6666666.229932.peg.1935 CDS AEJN02000087.1 24874 22940 -1 - 1935 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) Multidrug Resistance Efflux Pumps
fig|6666666.229932.peg.1936 CDS AEJN02000087.1 25943 24894 -2 - 1050 Macrolide-specific efflux protein MacA Multidrug Resistance Efflux Pumps
fig|6666666.229932.peg.1937 CDS AEJN02000087.1 26216 27907 2 + 1692 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229932.peg.1938 CDS AEJN02000087.1 28009 27890 -1 - 120 hypothetical protein - none -
fig|6666666.229932.peg.1939 CDS AEJN02000087.1 28018 28305 1 + 288 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.1940 CDS AEJN02000087.1 28315 28611 1 + 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.1941 CDS AEJN02000087.1 28679 29080 2 + 402 YcgN (Fragment) CBSS-243277.1.peg.4359
fig|6666666.229932.peg.1942 CDS AEJN02000088.1 250 26 -1 - 225 Transcriptional regulator, AsnC family - none -
fig|6666666.229932.peg.1943 CDS AEJN02000088.1 1870 341 -1 - 1530 Arginine/ornithine antiporter ArcD Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229932.peg.1944 CDS AEJN02000088.1 2919 1987 -3 - 933 Carbamate kinase (EC 2.7.2.2) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229932.peg.1945 CDS AEJN02000088.1 3933 2929 -3 - 1005 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229932.peg.1946 CDS AEJN02000088.1 4176 5567 3 + 1392 Chloride channel protein - none -
fig|6666666.229932.peg.1947 CDS AEJN02000088.1 5719 6453 1 + 735 tRNA dihydrouridine synthase A - none -
fig|6666666.229932.peg.1948 CDS AEJN02000088.1 7501 6509 -1 - 993 Aspartate--ammonia ligase (EC 6.3.1.1) CBSS-262728.1.peg.1737;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229932.peg.1949 CDS AEJN02000088.1 7667 8119 2 + 453 Regulatory protein AsnC CBSS-262728.1.peg.1737
fig|6666666.229932.peg.1950 CDS AEJN02000088.1 8154 8912 3 + 759 Uridine phosphorylase (EC 2.4.2.3) pyrimidine conversions
fig|6666666.229932.peg.1951 CDS AEJN02000088.1 10108 9047 -1 - 1062 Putative permease PerM (= YfgO) - none -
fig|6666666.229932.peg.1952 CDS AEJN02000088.1 10182 10532 3 + 351 Arsenate reductase (EC 1.20.4.1) Anaerobic respiratory reductases;
Arsenic resistance;
Transcription repair cluster
fig|6666666.229932.peg.1953 CDS AEJN02000088.1 11078 10716 -2 - 363 FIG00696564: hypothetical protein - none -
fig|6666666.229932.peg.1954 CDS AEJN02000088.1 11313 11029 -3 - 285 hypothetical protein - none -
fig|6666666.229932.peg.1955 CDS AEJN02000088.1 11425 12855 1 + 1431 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229932.peg.1956 CDS AEJN02000088.1 12980 13384 2 + 405 Low molecular weight protein tyrosine phosphatase (EC 3.1.3.48) LMPTP YfkJ cluster;
Protein deglycation
fig|6666666.229932.peg.1957 CDS AEJN02000088.1 14412 13801 -3 - 612 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) G3E family of P-loop GTPases (metallocenter biosynthesis);
Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229932.peg.1958 CDS AEJN02000088.1 14620 14507 -1 - 114 probable periplasmic protein NMA1059 - none -
fig|6666666.229932.peg.1959 CDS AEJN02000088.1 15699 15265 -3 - 435 Ribonuclease E inhibitor RraB RNA processing and degradation, bacterial
fig|6666666.229932.peg.1960 CDS AEJN02000088.1 16189 15794 -1 - 396 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229932.peg.1961 CDS AEJN02000088.1 17675 16299 -2 - 1377 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229932.peg.1962 CDS AEJN02000088.1 18865 17699 -1 - 1167 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229932.peg.1963 CDS AEJN02000089.1 1048 107 -1 - 942 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229932.peg.1964 CDS AEJN02000089.1 1211 2698 2 + 1488 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229932.peg.1965 CDS AEJN02000089.1 2714 3742 2 + 1029 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) D-ribose utilization
fig|6666666.229932.peg.1966 CDS AEJN02000089.1 3748 4461 1 + 714 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229932.peg.1967 CDS AEJN02000089.1 4442 5194 2 + 753 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) L-ascorbate utilization (and related gene clusters)
fig|6666666.229932.peg.1968 CDS AEJN02000089.1 6472 5213 -1 - 1260 Transcription accessory protein (S1 RNA-binding domain) CBSS-243265.1.peg.198;
Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229932.peg.1969 CDS AEJN02000091.1 2547 238 -3 - 2310 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) DNA uptake cluster;
Peptidoglycan Biosynthesis;
Type IV pilus
fig|6666666.229932.peg.1970 CDS AEJN02000091.1 3458 2715 -2 - 744 Putative membrane protein YeiH - none -
fig|6666666.229932.peg.1971 CDS AEJN02000091.1 9669 3898 -3 - 5772 FIG00904191: hypothetical protein - none -
fig|6666666.229932.peg.1972 CDS AEJN02000091.1 11183 9735 -2 - 1449 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229932.peg.1973 CDS AEJN02000091.1 12340 11480 -1 - 861 Molybdenum transport system protein ModD Molybdenum cofactor biosynthesis
fig|6666666.229932.peg.1974 CDS AEJN02000091.1 12768 12337 -3 - 432 ABC transporter ATP-binding protein - none -
fig|6666666.229932.peg.1975 CDS AEJN02000091.1 13722 12919 -3 - 804 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229932.peg.1976 CDS AEJN02000091.1 13846 13691 -1 - 156 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229932.peg.1977 CDS AEJN02000091.1 14833 15018 1 + 186 Mobile element protein - none -
fig|6666666.229932.peg.1978 CDS AEJN02000091.1 15060 15308 3 + 249 Mobile element protein - none -
fig|6666666.229932.peg.1979 CDS AEJN02000092.1 391 17 -1 - 375 hypothetical protein - none -
fig|6666666.229932.peg.1980 CDS AEJN02000092.1 1538 513 -2 - 1026 hypothetical protein - none -
fig|6666666.229932.peg.1981 CDS AEJN02000092.1 2003 1551 -2 - 453 hypothetical protein - none -
fig|6666666.229932.peg.1982 CDS AEJN02000093.1 358 140 -1 - 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229932.peg.1983 CDS AEJN02000093.1 413 535 2 + 123 hypothetical protein - none -
fig|6666666.229932.peg.1984 CDS AEJN02000093.1 852 1838 3 + 987 Peptidase B (EC 3.4.11.23) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229932.peg.1985 CDS AEJN02000093.1 1850 2275 2 + 426 Nucleoside diphosphate kinase (EC 2.7.4.6) CBSS-498211.3.peg.1415;
Purine conversions;
pyrimidine conversions
fig|6666666.229932.peg.1986 CDS AEJN02000093.1 2411 3556 2 + 1146 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229932.peg.1987 CDS AEJN02000093.1 3664 3819 1 + 156 Mobile element protein - none -
fig|6666666.229932.peg.1988 CDS AEJN02000093.1 5351 4182 -2 - 1170 Lipoprotein NlpD Stationary phase repair cluster
fig|6666666.229932.peg.1989 CDS AEJN02000093.1 5559 5368 -3 - 192 Cobalamin biosynthesis protein CobN and related Mg-chelatases - none -
fig|6666666.229932.peg.1990 CDS AEJN02000093.1 6149 5574 -2 - 576 FIG139438: lipoprotein B Stationary phase repair cluster
fig|6666666.229932.peg.1991 CDS AEJN02000093.1 6917 6177 -2 - 741 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) Housecleaning nucleoside triphosphate pyrophosphatases;
Phosphate metabolism;
Polyphosphate;
Stationary phase repair cluster
fig|6666666.229932.peg.1992 CDS AEJN02000093.1 7960 6950 -1 - 1011 tRNA pseudouridine 13 synthase (EC 4.2.1.-) Stationary phase repair cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229932.peg.1993 CDS AEJN02000093.1 8436 7957 -3 - 480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229932.peg.1994 CDS AEJN02000093.1 9128 8433 -2 - 696 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster;
Teichoic and lipoteichoic acids biosynthesis
fig|6666666.229932.peg.1995 CDS AEJN02000093.1 9406 9128 -1 - 279 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229932.peg.1996 CDS AEJN02000093.1 9558 10232 3 + 675 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway;
Riboflavin synthesis cluster
fig|6666666.229932.peg.1997 CDS AEJN02000093.1 10235 10909 2 + 675 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229932.peg.1998 CDS AEJN02000093.1 11404 12408 1 + 1005 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229932.peg.1999 CDS AEJN02000093.1 12977 12495 -2 - 483 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
riboflavin to FAD
fig|6666666.229932.peg.2000 CDS AEJN02000093.1 14939 13437 -2 - 1503 Sodium-dependent transporter - none -
fig|6666666.229932.peg.2001 CDS AEJN02000093.1 15305 15454 2 + 150 hypothetical protein - none -
fig|6666666.229932.peg.2002 CDS AEJN02000093.1 15483 15632 3 + 150 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229932.peg.2003 CDS AEJN02000093.1 15634 16350 1 + 717 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229932.peg.2004 CDS AEJN02000093.1 16732 16604 -1 - 129 hypothetical protein - none -
fig|6666666.229932.peg.2005 CDS AEJN02000094.1 363 1751 3 + 1389 hypothetical protein - none -
fig|6666666.229932.peg.2006 CDS AEJN02000094.1 1741 2448 1 + 708 hypothetical protein - none -
fig|6666666.229932.peg.2007 CDS AEJN02000094.1 2472 4832 3 + 2361 hypothetical protein - none -
fig|6666666.229932.peg.2008 CDS AEJN02000094.1 4840 5118 1 + 279 hypothetical protein - none -
fig|6666666.229932.peg.2009 CDS AEJN02000094.1 5345 5824 2 + 480 hypothetical protein - none -
fig|6666666.229932.peg.2010 CDS AEJN02000094.1 6285 6440 3 + 156 hypothetical protein - none -
fig|6666666.229932.peg.2011 CDS AEJN02000094.1 6433 8697 1 + 2265 NADP-dependent malic enzyme (EC 1.1.1.40) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229932.peg.2012 CDS AEJN02000094.1 8841 9485 3 + 645 Manganese superoxide dismutase (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229932.peg.2013 CDS AEJN02000094.1 9896 10687 2 + 792 putative lipoprotein - none -
fig|6666666.229932.peg.2014 CDS AEJN02000094.1 11717 10890 -2 - 828 YpfJ protein, zinc metalloprotease superfamily Broadly distributed proteins not in subsystems
fig|6666666.229932.peg.2015 CDS AEJN02000094.1 11812 12255 1 + 444 FIG00904084: hypothetical protein - none -
fig|6666666.229932.peg.2016 CDS AEJN02000094.1 12941 12345 -2 - 597 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.2017 CDS AEJN02000094.1 13038 13391 3 + 354 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229932.peg.2018 CDS AEJN02000094.1 13412 14842 2 + 1431 Transglycosylase, Slt family - none -
fig|6666666.229932.peg.2019 CDS AEJN02000094.1 14853 14999 3 + 147 hypothetical protein - none -
fig|6666666.229932.peg.2020 CDS AEJN02000094.1 15581 15042 -2 - 540 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229932.peg.2021 CDS AEJN02000094.1 17149 15605 -1 - 1545 Na+/H+ antiporter NhaB - none -
fig|6666666.229932.peg.2022 CDS AEJN02000094.1 17344 18075 1 + 732 Transcriptional regulator for fatty acid degradation FadR, GntR family - none -
fig|6666666.229932.peg.2023 CDS AEJN02000094.1 19410 18196 -3 - 1215 Aspartate aminotransferase (EC 2.6.1.1) CBSS-216591.1.peg.168;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229932.peg.2024 CDS AEJN02000094.1 19527 20831 3 + 1305 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229932.peg.2025 CDS AEJN02000094.1 21833 22480 2 + 648 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229932.peg.2026 CDS AEJN02000094.1 22533 23282 3 + 750 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229932.peg.2027 CDS AEJN02000094.1 23378 23647 2 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229932.peg.2028 CDS AEJN02000094.1 23855 25009 2 + 1155 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Biosynthesis;
Methionine Degradation
fig|6666666.229932.peg.2029 CDS AEJN02000095.1 1895 1713 -2 - 183 hypothetical protein - none -
fig|6666666.229932.peg.2030 CDS AEJN02000095.1 2624 3079 2 + 456 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229932.peg.2031 CDS AEJN02000095.1 3107 4603 2 + 1497 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229932.peg.2032 CDS AEJN02000095.1 6074 7084 2 + 1011 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229932.peg.2033 CDS AEJN02000096.1 1221 265 -3 - 957 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229932.peg.2034 CDS AEJN02000096.1 1799 1287 -2 - 513 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229932.peg.2035 CDS AEJN02000098.1 182 436 2 + 255 Mobile element protein - none -
fig|6666666.229932.peg.2036 CDS AEJN02000098.1 1250 534 -2 - 717 COG1720: Uncharacterized conserved protein tRNA modification Bacteria
fig|6666666.229932.peg.2037 CDS AEJN02000098.1 1380 2324 3 + 945 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) Menaquinone and Phylloquinone Biosynthesis;
Menaquinone and Phylloquinone Biosynthesis -- gjo
fig|6666666.229932.peg.2038 CDS AEJN02000098.1 2375 2875 2 + 501 Ribonuclease E inhibitor RraA RNA processing and degradation, bacterial
fig|6666666.229932.peg.2039 CDS AEJN02000098.1 2896 3060 1 + 165 hypothetical protein - none -
fig|6666666.229932.peg.2040 CDS AEJN02000098.1 3065 4456 2 + 1392 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229932.peg.2041 CDS AEJN02000098.1 5047 4514 -1 - 534 FIG138315: Putative alpha helix protein Putative TldE-TldD proteolytic complex
fig|6666666.229932.peg.2042 CDS AEJN02000098.1 5164 6525 1 + 1362 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229932.peg.2043 CDS AEJN02000098.1 6764 7303 2 + 540 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229932.peg.2044 CDS AEJN02000098.1 8513 7374 -2 - 1140 Glycerate kinase (EC 2.7.1.31) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria;
Glycine and Serine Utilization;
Serine-glyoxylate cycle
fig|6666666.229932.peg.2045 CDS AEJN02000098.1 9574 8510 -1 - 1065 D-glycerate transporter (predicted) D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo;
Glycerate metabolism
fig|6666666.229932.peg.2046 CDS AEJN02000098.1 10643 9861 -2 - 783 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229932.peg.2047 CDS AEJN02000098.1 10975 10649 -1 - 327 Sugar diacid utilization regulator SdaR D-galactarate, D-glucarate and D-glycerate catabolism;
D-galactarate, D-glucarate and D-glycerate catabolism - gjo
fig|6666666.229932.peg.2048 CDS AEJN02000098.1 11211 11056 -3 - 156 Mobile element protein - none -
fig|6666666.229932.peg.2049 CDS AEJN02000098.1 14712 13810 -3 - 903 Lipoprotein nlpI precursor - none -
fig|6666666.229932.peg.2050 CDS AEJN02000098.1 17028 14797 -3 - 2232 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Polyadenylation bacterial
fig|6666666.229932.peg.2051 CDS AEJN02000098.1 17220 17690 3 + 471 Putative sugar isomerase involved in processing of exogenous sialic acid Sialic Acid Metabolism
fig|6666666.229932.peg.2052 CDS AEJN02000098.1 17804 17679 -2 - 126 hypothetical protein - none -
fig|6666666.229932.peg.2053 CDS AEJN02000098.1 18718 18164 -1 - 555 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD Recycling of Peptidoglycan Amino Acids
fig|6666666.229932.peg.2054 CDS AEJN02000098.1 18806 18693 -2 - 114 hypothetical protein - none -
fig|6666666.229932.peg.2055 CDS AEJN02000098.1 18841 19293 1 + 453 Type IV pilin PilA Type IV pilus
fig|6666666.229932.peg.2056 CDS AEJN02000098.1 19320 20729 3 + 1410 Type IV fimbrial assembly, ATPase PilB Type IV pilus
fig|6666666.229932.peg.2057 CDS AEJN02000098.1 20722 21945 1 + 1224 Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC Type IV pilus
fig|6666666.229932.peg.2058 CDS AEJN02000098.1 21945 22631 3 + 687 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) Type IV pilus;
Type IV pilus
fig|6666666.229932.peg.2059 CDS AEJN02000099.1 499 74 -1 - 426 hypothetical protein - none -
fig|6666666.229932.peg.2060 CDS AEJN02000100.1 301 173 -1 - 129 hypothetical protein - none -
fig|6666666.229932.peg.2061 CDS AEJN02000101.1 11 196 2 + 186 hypothetical protein - none -
fig|6666666.229932.peg.2062 CDS AEJN02000102.1 177 362 3 + 186 hypothetical protein - none -
fig|6666666.229932.peg.2063 CDS AEJN02000102.1 3544 2036 -1 - 1509 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229932.peg.2064 CDS AEJN02000102.1 4503 3601 -3 - 903 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229932.peg.2065 CDS AEJN02000102.1 4783 4622 -1 - 162 hypothetical protein - none -
fig|6666666.229932.peg.2066 CDS AEJN02000102.1 4867 5550 1 + 684 Thiol:disulfide interchange protein DsbC Periplasmic disulfide interchange
fig|6666666.229932.peg.2067 CDS AEJN02000102.1 5563 7284 1 + 1722 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229932.peg.2068 CDS AEJN02000102.1 7317 7964 3 + 648 Thiol-disulfide isomerase and thioredoxins - none -
fig|6666666.229932.peg.2069 CDS AEJN02000102.1 7981 8673 1 + 693 5@1-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) Adenosyl nucleosidases;
Adenosyl nucleosidases;
Methionine Biosynthesis;
Methionine Degradation;
Polyamine Metabolism
fig|6666666.229932.peg.2070 CDS AEJN02000102.1 8852 9547 2 + 696 Additional periplasmic component NikK of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229932.peg.2071 CDS AEJN02000102.1 9554 10057 2 + 504 Additional component NikL of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229932.peg.2072 CDS AEJN02000102.1 10057 10710 1 + 654 Substrate-specific component NikM of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229932.peg.2073 CDS AEJN02000102.1 10707 11372 3 + 666 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229932.peg.2074 CDS AEJN02000102.1 11369 11992 2 + 624 ATPase component NikO of energizing module of nickel ECF transporter Transport of Nickel and Cobalt
fig|6666666.229932.peg.2075 CDS AEJN02000102.1 12071 12880 2 + 810 [NiFe] hydrogenase nickel incorporation-associated protein HypB G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229932.peg.2076 CDS AEJN02000102.1 12907 14019 1 + 1113 [NiFe] hydrogenase metallocenter assembly protein HypD G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229932.peg.2077 CDS AEJN02000102.1 14019 15032 3 + 1014 [NiFe] hydrogenase metallocenter assembly protein HypE G3E family of P-loop GTPases (metallocenter biosynthesis);
NiFe hydrogenase maturation
fig|6666666.229932.peg.2078 CDS AEJN02000102.1 19913 19098 -2 - 816 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229932.peg.2079 CDS AEJN02000102.1 20947 20063 -1 - 885 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
Methionine Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229932.peg.2080 CDS AEJN02000102.1 22189 21122 -1 - 1068 FIG000906: Predicted Permease CBSS-208964.1.peg.3826
fig|6666666.229932.peg.2081 CDS AEJN02000102.1 23312 22194 -2 - 1119 FIG000988: Predicted permease CBSS-208964.1.peg.3826
fig|6666666.229932.peg.2082 CDS AEJN02000102.1 23449 24939 1 + 1491 Cytosol aminopeptidase PepA (EC 3.4.11.1) Aminopeptidases (EC 3.4.11.-);
CBSS-208964.1.peg.3826;
Dehydrogenase complexes
fig|6666666.229932.peg.2083 CDS AEJN02000102.1 26145 25084 -3 - 1062 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229932.peg.2084 CDS AEJN02000102.1 26860 26132 -1 - 729 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229932.peg.2085 CDS AEJN02000102.1 27703 26939 -1 - 765 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Molybdenum cofactor biosynthesis
fig|6666666.229932.peg.2086 CDS AEJN02000102.1 27931 28710 1 + 780 DNA-binding domain of ModE / Molybdate-binding domain of ModE Molybdenum cofactor biosynthesis;
Molybdenum cofactor biosynthesis
fig|6666666.229932.peg.2087 CDS AEJN02000102.1 28877 30274 2 + 1398 Arsenic efflux pump protein Arsenic resistance
fig|6666666.229932.peg.2088 CDS AEJN02000102.1 30937 30341 -1 - 597 Nucleotidase YfbR, HD superfamily Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229932.peg.2089 CDS AEJN02000102.1 31974 30946 -3 - 1029 Outer membrane stress sensor protease DegS Periplasmic Stress Response;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229932.peg.2090 CDS AEJN02000102.1 33107 31983 -2 - 1125 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin synthesis cluster;
Riboflavin synthesis cluster
fig|6666666.229932.peg.2091 CDS AEJN02000102.1 33559 33107 -1 - 453 Ribonucleotide reductase transcriptional regulator NrdR Ribonucleotide reduction
fig|6666666.229932.peg.2092 CDS AEJN02000102.1 34737 33676 -3 - 1062 LSU rRNA 2@1-O-methyl-C2498 methyltransferase RlmM RNA methylation
fig|6666666.229932.peg.2093 CDS AEJN02000102.1 35662 34757 -1 - 906 Glycine cleavage system transcriptional activator GcvA LysR-family proteins in Escherichia coli;
Orphan regulatory proteins
fig|6666666.229932.peg.2094 CDS AEJN02000102.1 36124 37143 1 + 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Pyruvate Alanine Serine Interconversions
fig|6666666.229932.peg.2095 CDS AEJN02000103.1 301 417 1 + 117 hypothetical protein - none -
fig|6666666.229932.peg.2096 CDS AEJN02000103.1 646 506 -1 - 141 hypothetical protein - none -
fig|6666666.229932.peg.2097 CDS AEJN02000103.1 1440 643 -3 - 798 Acetolactate synthase large subunit (EC 2.2.1.6) - none -
fig|6666666.229932.peg.2098 CDS AEJN02000103.1 1659 2477 3 + 819 Cof protein, HD superfamily hydrolase Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229932.peg.2099 CDS AEJN02000103.1 3438 2515 -3 - 924 Lysophospholipase L2 (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229932.peg.2100 CDS AEJN02000103.1 4744 3431 -1 - 1314 O-antigen ligase LOS core oligosaccharide biosynthesis
fig|6666666.229932.peg.2101 CDS AEJN02000103.1 4607 4780 2 + 174 hypothetical protein - none -
fig|6666666.229932.peg.2102 CDS AEJN02000103.1 5861 4782 -2 - 1080 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229932.peg.2103 CDS AEJN02000103.1 7089 5926 -3 - 1164 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229932.peg.2104 CDS AEJN02000103.1 7897 7202 -1 - 696 Probable ribonuclease HI0526 precursor - none -
fig|6666666.229932.peg.2105 CDS AEJN02000103.1 8004 8225 3 + 222 4Fe-4S ferredoxin, iron-sulfur binding - none -
fig|6666666.229932.peg.2106 CDS AEJN02000103.1 9368 8292 -2 - 1077 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] RNA methylation;
tRNA modification Bacteria
fig|6666666.229932.peg.2107 CDS AEJN02000103.1 9554 10921 2 + 1368 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.2108 CDS AEJN02000103.1 11037 11312 3 + 276 HigB toxin protein Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.2109 CDS AEJN02000103.1 11329 11625 1 + 297 HigA protein (antitoxin to HigB) Toxin-antitoxin replicon stabilization systems
fig|6666666.229932.peg.2110 CDS AEJN02000103.1 12445 11684 -1 - 762 Lipopolysaccharide biosynthesis glycosyltransferase - none -
fig|6666666.229932.peg.2111 CDS AEJN02000103.1 12544 13827 1 + 1284 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) KDO2-Lipid A biosynthesis;
LOS core oligosaccharide biosynthesis
fig|6666666.229932.peg.2112 CDS AEJN02000103.1 13828 14322 1 + 495 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229932.peg.2113 CDS AEJN02000103.1 15096 14371 -3 - 726 3-deoxy-D-manno-octulosonic acid kinase (EC 2.7.1.-) - none -
fig|6666666.229932.peg.2114 CDS AEJN02000103.1 15186 16229 3 + 1044 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) LOS core oligosaccharide biosynthesis
fig|6666666.229932.peg.2115 CDS AEJN02000103.1 16667 16326 -2 - 342 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44) - none -
fig|6666666.229932.peg.2116 CDS AEJN02000103.1 16771 17688 1 + 918 transcriptional regulator MtrA - none -
fig|6666666.229932.peg.2117 CDS AEJN02000103.1 17776 19620 1 + 1845 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229932.peg.2118 CDS AEJN02000103.1 22099 19661 -1 - 2439 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229932.peg.2119 CDS AEJN02000103.1 22307 22930 2 + 624 SOS-response repressor and protease LexA (EC 3.4.21.88) DNA repair, bacterial
fig|6666666.229932.peg.2120 CDS AEJN02000103.1 23082 23459 3 + 378 SSU ribosomal protein S6p Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial
fig|6666666.229932.peg.2121 CDS AEJN02000103.1 23446 23772 1 + 327 Primosomal replication protein N Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229932.peg.2122 CDS AEJN02000103.1 23785 24015 1 + 231 SSU ribosomal protein S18p @ SSU ribosomal protein S18p, zinc-independent Primosomal replication protein N clusters with ribosomal proteins;
Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229932.peg.2123 CDS AEJN02000103.1 24031 24480 1 + 450 LSU ribosomal protein L9p Primosomal replication protein N clusters with ribosomal proteins
fig|6666666.229932.peg.2124 CDS AEJN02000103.1 24470 24667 2 + 198 hypothetical protein - none -
fig|6666666.229932.peg.2125 CDS AEJN02000103.1 24698 25816 2 + 1119 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
YrdC-YciO-Sua5 protein family
fig|6666666.229932.peg.2126 CDS AEJN02000103.1 26954 25872 -2 - 1083 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) - none -
fig|6666666.229932.peg.2127 CDS AEJN02000103.1 28628 27186 -2 - 1443 Glycerol-3-phosphate transporter - none -
fig|6666666.229932.peg.2128 CDS AEJN02000103.1 28818 28648 -3 - 171 hypothetical protein - none -
fig|6666666.229932.peg.2129 CDS AEJN02000103.1 29698 28961 -1 - 738 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229932.peg.2130 CDS AEJN02000103.1 32100 29695 -3 - 2406 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229932.peg.2131 CDS AEJN02000103.1 32350 33405 1 + 1056 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton
fig|6666666.229932.peg.2132 CDS AEJN02000103.1 33475 34548 1 + 1074 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229932.peg.2133 CDS AEJN02000103.1 34548 35036 3 + 489 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-354.1.peg.2917
fig|6666666.229932.peg.2134 CDS AEJN02000103.1 35496 35146 -3 - 351 LSU ribosomal protein L19p - none -
fig|6666666.229932.peg.2135 CDS AEJN02000103.1 36271 35522 -1 - 750 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229932.peg.2136 CDS AEJN02000103.1 36864 36337 -3 - 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229932.peg.2137 CDS AEJN02000103.1 37138 36890 -1 - 249 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229932.peg.2138 CDS AEJN02000103.1 37324 37479 1 + 156 hypothetical protein - none -
fig|6666666.229932.peg.2139 CDS AEJN02000103.1 38919 37633 -3 - 1287 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-);
CBSS-87626.3.peg.3639
fig|6666666.229932.peg.2140 CDS AEJN02000103.1 39683 38949 -2 - 735 FIG001590: Putative conserved exported protein precursor CBSS-87626.3.peg.3639
fig|6666666.229932.peg.2141 CDS AEJN02000103.1 39677 39982 2 + 306 Z-ring-associated protein ZapA Bacterial Cytoskeleton
fig|6666666.229932.peg.2142 CDS AEJN02000103.1 40276 40851 1 + 576 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines;
Serine-glyoxylate cycle
fig|6666666.229932.peg.2143 CDS AEJN02000103.1 41677 40889 -1 - 789 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) Lipopolysaccharide assembly
fig|6666666.229932.peg.2144 CDS AEJN02000103.1 41784 42758 3 + 975 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229932.peg.2145 CDS AEJN02000103.1 42760 43497 1 + 738 COG1496: Uncharacterized conserved protein - none -
fig|6666666.229932.peg.2146 CDS AEJN02000103.1 43866 44015 3 + 150 hypothetical protein - none -
fig|6666666.229932.peg.2147 CDS AEJN02000103.1 44786 44929 2 + 144 hypothetical protein - none -
fig|6666666.229932.peg.2148 CDS AEJN02000103.1 45696 45232 -3 - 465 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229932.peg.2149 CDS AEJN02000103.1 46229 45879 -2 - 351 Transcriptional regulator - none -
fig|6666666.229932.peg.2150 CDS AEJN02000103.1 46703 46233 -2 - 471 hypothetical protein - none -
fig|6666666.229932.peg.2151 CDS AEJN02000103.1 47276 46782 -2 - 495 hypothetical protein - none -
fig|6666666.229932.peg.2152 CDS AEJN02000103.1 47644 47285 -1 - 360 hypothetical protein - none -
fig|6666666.229932.peg.2153 CDS AEJN02000103.1 48247 47921 -1 - 327 hypothetical protein - none -
fig|6666666.229932.peg.2154 CDS AEJN02000103.1 48720 48244 -3 - 477 FIG00698199: hypothetical protein - none -
fig|6666666.229932.peg.2155 CDS AEJN02000103.1 48836 48723 -2 - 114 hypothetical protein - none -
fig|6666666.229932.peg.2156 CDS AEJN02000103.1 49260 49096 -3 - 165 hypothetical protein - none -
fig|6666666.229932.peg.2157 CDS AEJN02000103.1 49461 49270 -3 - 192 hypothetical protein - none -
fig|6666666.229932.peg.2158 CDS AEJN02000103.1 49909 49697 -1 - 213 Gam - none -
fig|6666666.229932.peg.2159 CDS AEJN02000103.1 50534 50193 -2 - 342 hypothetical protein - none -
fig|6666666.229932.peg.2160 CDS AEJN02000103.1 51716 50538 -2 - 1179 Eha - none -
fig|6666666.229932.peg.2161 CDS AEJN02000103.1 53501 51729 -2 - 1773 Phage transposase - none -
fig|6666666.229932.peg.2162 CDS AEJN02000103.1 54457 53513 -1 - 945 FIG00697991: hypothetical protein - none -
fig|6666666.229932.peg.2163 CDS AEJN02000103.1 54774 54469 -3 - 306 Transcriptional regulator, IclR family - none -
fig|6666666.229932.peg.2164 CDS AEJN02000103.1 54962 54786 -2 - 177 hypothetical protein - none -
fig|6666666.229932.peg.2165 CDS AEJN02000103.1 55398 55039 -3 - 360 hypothetical protein - none -
fig|6666666.229932.peg.2166 CDS AEJN02000103.1 55645 55409 -1 - 237 hypothetical protein - none -
fig|6666666.229932.peg.2167 CDS AEJN02000103.1 55698 55931 3 + 234 hypothetical protein - none -
fig|6666666.229932.peg.2168 CDS AEJN02000103.1 56328 56489 3 + 162 hypothetical protein - none -
fig|6666666.229932.peg.2169 CDS AEJN02000103.1 56516 57163 2 + 648 hypothetical protein - none -
fig|6666666.229932.peg.2170 CDS AEJN02000103.1 57187 57435 1 + 249 hypothetical protein - none -
fig|6666666.229932.peg.2171 CDS AEJN02000103.1 57814 57437 -1 - 378 hypothetical protein - none -
fig|6666666.229932.peg.2172 CDS AEJN02000103.1 58166 57816 -2 - 351 Phage protein - none -
fig|6666666.229932.peg.2173 CDS AEJN02000103.1 58320 58688 3 + 369 Phage protein - none -
fig|6666666.229932.peg.2174 CDS AEJN02000103.1 58754 59332 2 + 579 Phage lysin #murein transglycosylase - none -
fig|6666666.229932.peg.2175 CDS AEJN02000103.1 59323 59769 1 + 447 Phage protein - none -
fig|6666666.229932.peg.2176 CDS AEJN02000103.1 59866 60138 1 + 273 hypothetical protein - none -
fig|6666666.229932.peg.2177 CDS AEJN02000103.1 60098 60217 2 + 120 hypothetical protein - none -
fig|6666666.229932.peg.2178 CDS AEJN02000103.1 60219 60524 3 + 306 Phage protein - none -
fig|6666666.229932.peg.2179 CDS AEJN02000103.1 60533 61072 2 + 540 Phage terminase, small subunit Phage packaging machinery
fig|6666666.229932.peg.2180 CDS AEJN02000103.1 61069 62682 1 + 1614 Phage terminase, large subunit Phage packaging machinery
fig|6666666.229932.peg.2181 CDS AEJN02000103.1 62686 64188 1 + 1503 Mu-like prophage FluMu protein gp29 - none -
fig|6666666.229932.peg.2182 CDS AEJN02000103.1 64181 65434 2 + 1254 Phage (Mu-like) virion morphogenesis protein - none -
fig|6666666.229932.peg.2183 CDS AEJN02000103.1 65537 66028 2 + 492 possible bacteriophage Mu G-like protein - none -
fig|6666666.229932.peg.2184 CDS AEJN02000103.1 66300 66166 -3 - 135 hypothetical protein - none -
fig|6666666.229932.peg.2185 CDS AEJN02000103.1 66344 67279 2 + 936 FIG00698681: hypothetical protein - none -
fig|6666666.229932.peg.2186 CDS AEJN02000103.1 67276 67641 1 + 366 Phage protein - none -
fig|6666666.229932.peg.2187 CDS AEJN02000103.1 67705 68628 1 + 924 hypothetical protein - none -
fig|6666666.229932.peg.2188 CDS AEJN02000103.1 68638 69150 1 + 513 Phage protein - none -
fig|6666666.229932.peg.2189 CDS AEJN02000103.1 69150 69596 3 + 447 Phage protein - none -
fig|6666666.229932.peg.2190 CDS AEJN02000103.1 69593 69865 2 + 273 hypothetical protein - none -
fig|6666666.229932.peg.2191 CDS AEJN02000103.1 69866 70612 2 + 747 Phage protein - none -
fig|6666666.229932.peg.2192 CDS AEJN02000103.1 70659 71078 3 + 420 Phage protein - none -
fig|6666666.229932.peg.2193 CDS AEJN02000103.1 71057 71269 2 + 213 hypothetical protein - none -
fig|6666666.229932.peg.2194 CDS AEJN02000103.1 71507 71292 -2 - 216 hypothetical protein - none -
fig|6666666.229932.peg.2195 CDS AEJN02000103.1 71522 74818 2 + 3297 Phage tail length tape-measure protein Phage tail proteins;
Phage tail proteins 2
fig|6666666.229932.peg.2196 CDS AEJN02000103.1 74830 75828 1 + 999 Phage protein - none -
fig|6666666.229932.peg.2197 CDS AEJN02000103.1 75831 76796 3 + 966 Phage protein - none -
fig|6666666.229932.peg.2198 CDS AEJN02000103.1 76802 78493 2 + 1692 FIG00698772: hypothetical protein - none -
fig|6666666.229932.peg.2199 CDS AEJN02000103.1 78517 79323 1 + 807 Phage FAD/FMN-containing dehydrogenase - none -
fig|6666666.229932.peg.2200 CDS AEJN02000103.1 79338 79586 3 + 249 hypothetical protein - none -
fig|6666666.229932.peg.2201 CDS AEJN02000103.1 79621 79803 1 + 183 hypothetical protein - none -
fig|6666666.229932.peg.2202 CDS AEJN02000103.1 79803 82595 3 + 2793 FIG00696772: hypothetical protein - none -
fig|6666666.229932.peg.2203 CDS AEJN02000103.1 82769 83617 2 + 849 FIG00697497: hypothetical protein - none -
fig|6666666.229932.peg.2204 CDS AEJN02000103.1 84815 84030 -2 - 786 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229932.peg.2205 CDS AEJN02000103.1 85559 84858 -2 - 702 Phosphoglycerol transferase I (EC 2.7.8.20) Synthesis of osmoregulated periplasmic glucans
fig|6666666.229932.peg.2206 CDS AEJN02000103.1 86283 85624 -3 - 660 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) - none -
fig|6666666.229932.peg.2207 CDS AEJN02000103.1 86693 86400 -2 - 294 COG1872 - none -
fig|6666666.229932.peg.2208 CDS AEJN02000103.1 87278 86718 -2 - 561 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) CBSS-630.2.peg.3360
fig|6666666.229932.peg.2209 CDS AEJN02000103.1 88241 87294 -2 - 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229932.peg.2210 CDS AEJN02000103.1 88243 88362 1 + 120 hypothetical protein - none -
fig|6666666.229932.peg.2211 CDS AEJN02000103.1 90602 89148 -2 - 1455 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) D-gluconate and ketogluconates metabolism;
Pentose phosphate pathway
fig|6666666.229932.peg.2212 CDS AEJN02000103.1 90623 90769 2 + 147 hypothetical protein - none -
fig|6666666.229932.peg.2213 CDS AEJN02000103.1 91616 91158 -2 - 459 Uncharacterized virulence-associated protein D - none -
fig|6666666.229932.peg.2214 CDS AEJN02000103.1 92327 91629 -2 - 699 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229932.peg.2215 CDS AEJN02000103.1 94064 92580 -2 - 1485 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229932.peg.2216 CDS AEJN02000103.1 94955 94146 -2 - 810 3@1(2@1),5@1-bisphosphate nucleotidase (EC 3.1.3.7) - none -
fig|6666666.229932.peg.2217 CDS AEJN02000103.1 95421 94993 -3 - 429 hypothetical protein - none -
fig|6666666.229932.peg.2218 CDS AEJN02000103.1 97564 95483 -1 - 2082 oligopeptide transporter - none -
fig|6666666.229932.peg.2219 CDS AEJN02000103.1 97858 98484 1 + 627 membrane protein ykgB - none -
fig|6666666.229932.peg.2220 CDS AEJN02000103.1 98555 99436 2 + 882 Transcriptional regulator, AraC family - none -
fig|6666666.229932.peg.2221 CDS AEJN02000103.1 100031 99441 -2 - 591 ADP compounds hydrolase NudE (EC 3.6.1.-) Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229932.peg.2222 CDS AEJN02000103.1 100070 100729 2 + 660 FIG001957: putative hydrolase - none -
fig|6666666.229932.peg.2223 CDS AEJN02000103.1 100742 101158 2 + 417 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229932.peg.2224 CDS AEJN02000106.1 247 684 1 + 438 C4-type zinc finger protein, DksA/TraR family - none -
fig|6666666.229932.peg.2225 CDS AEJN02000106.1 1424 2254 2 + 831 Poly(A) polymerase (EC 2.7.7.19) Polyadenylation bacterial
fig|6666666.229932.peg.2226 CDS AEJN02000106.1 2247 2747 3 + 501 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229932.peg.2227 CDS AEJN02000106.1 3179 2793 -2 - 387 hypothetical protein - none -
fig|6666666.229932.peg.2228 CDS AEJN02000106.1 5660 3525 -2 - 2136 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229932.peg.2229 CDS AEJN02000106.1 6932 5730 -2 - 1203 Acetate kinase (EC 2.7.2.1) CBSS-257314.1.peg.752;
Fermentations: Lactate;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229932.peg.2230 CDS AEJN02000106.1 7200 7643 3 + 444 FIG00638298: membrane protein YfbV - none -
fig|6666666.229932.peg.2231 CDS AEJN02000106.1 7822 8364 1 + 543 Colicin V production protein - none -
fig|6666666.229932.peg.2232 CDS AEJN02000106.1 8432 8551 2 + 120 hypothetical protein - none -
fig|6666666.229932.peg.2233 CDS AEJN02000106.1 10584 8509 -3 - 2076 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Glycogen metabolism cluster;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229932.peg.2234 CDS AEJN02000106.1 13119 10729 -3 - 2391 Maltodextrin phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229932.peg.2235 CDS AEJN02000106.1 13288 16002 1 + 2715 Transcriptional activator of maltose regulon, MalT Maltose and Maltodextrin Utilization;
Maltose utilization cluster
fig|6666666.229932.peg.2236 CDS AEJN02000106.1 17030 16155 -2 - 876 Tellurite resistance protein TehB Tellurite resistance: Chromosomal determinants
fig|6666666.229932.peg.2237 CDS AEJN02000106.1 17409 20066 3 + 2658 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 5-FCL-like protein;
Dehydrogenase complexes;
Methionine Degradation;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229932.peg.2238 CDS AEJN02000106.1 20095 21765 1 + 1671 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 5-FCL-like protein;
Dehydrogenase complexes;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229932.peg.2239 CDS AEJN02000106.1 21802 23283 1 + 1482 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
TCA Cycle;
TCA Cycle
fig|6666666.229932.peg.2240 CDS AEJN02000106.1 23488 23369 -1 - 120 hypothetical protein - none -
fig|6666666.229932.peg.2241 CDS AEJN02000106.1 24267 23713 -3 - 555 FIG002003: Protein YdjA - none -
fig|6666666.229932.peg.2242 CDS AEJN02000106.1 24391 26271 1 + 1881 Signal peptide peptidase SppA (EC 3.4.21.-) - none -
fig|6666666.229932.peg.2243 CDS AEJN02000106.1 26312 27436 2 + 1125 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229932.peg.2244 CDS AEJN02000106.1 27517 28140 1 + 624 Hypothetical YciO protein, TsaC/YrdC paralog YrdC-YciO-Sua5 protein family
fig|6666666.229932.peg.2245 CDS AEJN02000106.1 28195 29163 1 + 969 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229932.peg.2246 CDS AEJN02000106.1 29194 30165 1 + 972 Cys regulon transcriptional activator CysB Cysteine Biosynthesis;
LysR-family proteins in Escherichia coli
fig|6666666.229932.peg.2247 CDS AEJN02000106.1 30249 31076 3 + 828 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229932.peg.2248 CDS AEJN02000106.1 31511 31191 -2 - 321 putative cytoplasmic protein - none -
fig|6666666.229932.peg.2249 CDS AEJN02000106.1 31678 31544 -1 - 135 hypothetical protein - none -
fig|6666666.229932.peg.2250 CDS AEJN02000106.1 32979 31981 -3 - 999 Purine nucleotide synthesis repressor Purine nucleotide synthesis regulator
fig|6666666.229932.peg.2251 CDS AEJN02000106.1 34389 33286 -3 - 1104 Homoserine O-acetyltransferase (EC 2.3.1.31) Methionine Biosynthesis
fig|6666666.229932.peg.2252 CDS AEJN02000106.1 34582 35295 1 + 714 SanA protein - none -
fig|6666666.229932.peg.2253 CDS AEJN02000106.1 36265 35279 -1 - 987 Fructose repressor FruR, LacI family Fructose utilization
fig|6666666.229932.peg.2254 CDS AEJN02000106.1 36588 36454 -3 - 135 hypothetical protein - none -
fig|6666666.229932.rna.1 RNA AEJN02000002.1 116 1 -2 - 116 5S RNA - none -
fig|6666666.229932.rna.2 RNA AEJN02000002.1 3422 380 -2 - 3043 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229932.rna.3 RNA AEJN02000005.1 9597 9669 3 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229932.rna.4 RNA AEJN02000005.1 9674 9757 2 + 84 tRNA-Leu-TAA - none -
fig|6666666.229932.rna.5 RNA AEJN02000005.1 9812 9884 2 + 73 tRNA-Lys-TTT - none -
fig|6666666.229932.rna.6 RNA AEJN02000009.1 28713 28640 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229932.rna.7 RNA AEJN02000013.1 3150 3077 -3 - 74 tRNA-Arg-TCT - none -
fig|6666666.229932.rna.8 RNA AEJN02000013.1 3260 3187 -2 - 74 tRNA-Pro-TGG - none -
fig|6666666.229932.rna.9 RNA AEJN02000013.1 25782 25872 3 + 91 tRNA-SeC(p)-TCA - none -
fig|6666666.229932.rna.10 RNA AEJN02000018.1 8467 8396 -1 - 72 tRNA-Gln-TTG - none -
fig|6666666.229932.rna.11 RNA AEJN02000018.1 8579 8508 -2 - 72 tRNA-Gln-TTG - none -
fig|6666666.229932.rna.12 RNA AEJN02000018.1 8693 8612 -2 - 82 tRNA-Leu-TAG - none -
fig|6666666.229932.rna.13 RNA AEJN02000018.1 8775 8702 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229932.rna.14 RNA AEJN02000020.1 31180 31107 -1 - 74 tRNA-Lys-CTT - none -
fig|6666666.229932.rna.15 RNA AEJN02000020.1 31281 31209 -3 - 73 tRNA-Lys-TTT - none -
fig|6666666.229932.rna.16 RNA AEJN02000020.1 31384 31312 -1 - 73 tRNA-Lys-TTT - none -
fig|6666666.229932.rna.17 RNA AEJN02000022.1 19058 18972 -2 - 87 tRNA-Ser-GGA tRNAs
fig|6666666.229932.rna.18 RNA AEJN02000022.1 65971 66044 1 + 74 tRNA-Met-CAT - none -
fig|6666666.229932.rna.19 RNA AEJN02000029.1 1363 1293 -1 - 71 tRNA-Cys-GCA tRNAs
fig|6666666.229932.rna.20 RNA AEJN02000029.1 1447 1375 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229932.rna.21 RNA AEJN02000029.1 8845 8931 1 + 87 tRNA-Ser-TGA - none -
fig|6666666.229932.rna.22 RNA AEJN02000031.1 13520 13592 2 + 73 tRNA-Thr-TGT - none -
fig|6666666.229932.rna.23 RNA AEJN02000031.1 13626 13707 3 + 82 tRNA-Tyr-GTA - none -
fig|6666666.229932.rna.24 RNA AEJN02000031.1 13751 13822 2 + 72 tRNA-Gly-TCC - none -
fig|6666666.229932.rna.25 RNA AEJN02000031.1 13829 13901 2 + 73 tRNA-Thr-GGT - none -
fig|6666666.229932.rna.26 RNA AEJN02000034.1 72792 72874 3 + 83 tRNA-Leu-GAG tRNAs
fig|6666666.229932.rna.27 RNA AEJN02000038.1 155 1694 2 + 1540 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229932.rna.28 RNA AEJN02000041.1 1715 1633 -2 - 83 tRNA-Leu-CAA tRNAs
fig|6666666.229932.rna.29 RNA AEJN02000045.1 37143 37071 -3 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229932.rna.30 RNA AEJN02000055.1 58793 58865 2 + 73 tRNA-Phe-GAA tRNAs
fig|6666666.229932.rna.31 RNA AEJN02000055.1 58873 58945 1 + 73 tRNA-Asn-GTT - none -
fig|6666666.229932.rna.32 RNA AEJN02000061.1 19684 19611 -1 - 74 tRNA-Val-GAC tRNAs
fig|6666666.229932.rna.33 RNA AEJN02000061.1 82542 82472 -3 - 71 tRNA-Pseudo-AAC - none -
fig|6666666.229932.rna.34 RNA AEJN02000064.1 14516 14444 -2 - 73 tRNA-Ala-GGC tRNAs
fig|6666666.229932.rna.35 RNA AEJN02000064.1 16329 16401 3 + 73 tRNA-Val-TAC - none -
fig|6666666.229932.rna.36 RNA AEJN02000064.1 16443 16515 3 + 73 tRNA-Val-TAC - none -
fig|6666666.229932.rna.37 RNA AEJN02000077.1 180 107 -3 - 74 tRNA-Pro-TGG - none -
fig|6666666.229932.rna.38 RNA AEJN02000077.1 258 186 -3 - 73 tRNA-His-GTG - none -
fig|6666666.229932.rna.39 RNA AEJN02000077.1 366 293 -3 - 74 tRNA-Arg-CCG tRNAs
fig|6666666.229932.rna.40 RNA AEJN02000078.1 8616 8543 -3 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.229932.rna.41 RNA AEJN02000078.1 8747 8674 -2 - 74 tRNA-Arg-ACG tRNAs
fig|6666666.229932.rna.42 RNA AEJN02000078.1 8858 8768 -2 - 91 tRNA-Ser-GCT - none -
fig|6666666.229932.rna.43 RNA AEJN02000079.1 13139 13056 -2 - 84 tRNA-Leu-CAG tRNAs
fig|6666666.229932.rna.44 RNA AEJN02000085.1 4736 4663 -2 - 74 tRNA-Asp-GTC - none -
fig|6666666.229932.rna.45 RNA AEJN02000085.1 4835 4762 -2 - 74 tRNA-Asp-GTC - none -
fig|6666666.229932.rna.46 RNA AEJN02000085.1 65733 65661 -3 - 73 tRNA-Asn-GTT - none -
fig|6666666.229932.rna.47 RNA AEJN02000086.1 102 175 3 + 74 tRNA-Ile-GAT - none -
fig|6666666.229932.rna.48 RNA AEJN02000086.1 228 300 3 + 73 tRNA-Ala-TGC - none -
fig|6666666.229932.rna.49 RNA AEJN02000095.1 129 248 3 + 120 5S RNA - none -
fig|6666666.229932.rna.50 RNA AEJN02000095.1 255 328 3 + 74 tRNA-Asp-GTC - none -
fig|6666666.229932.rna.51 RNA AEJN02000095.1 366 438 3 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.229932.rna.52 RNA AEJN02000095.1 2392 2465 1 + 74 tRNA-Met-CAT - none -