fig|6666666.229938.peg.1 CDS AP013044.1 40 192 1 + 153 ABC transporter-related permease with MCE domain - none -
fig|6666666.229938.peg.2 CDS AP013044.1 613 1959 1 + 1347 Chromosomal replication initiator protein DnaA Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229938.peg.3 CDS AP013044.1 4364 1971 -2 - 2394 putative FtsX-related transmembrane transport protein - none -
fig|6666666.229938.peg.4 CDS AP013044.1 5078 4722 -2 - 357 LSU ribosomal protein L19p Ribosome LSU bacterial
fig|6666666.229938.peg.5 CDS AP013044.1 5338 5204 -1 - 135 hypothetical protein - none -
fig|6666666.229938.peg.6 CDS AP013044.1 5337 8339 3 + 3003 Beta-N-acetylglucosaminidase - none -
fig|6666666.229938.peg.7 CDS AP013044.1 8714 9475 2 + 762 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229938.peg.8 CDS AP013044.1 10965 9496 -3 - 1470 Carotenoid cis-trans isomerase (EC 5.2.-.-) - none -
fig|6666666.229938.peg.9 CDS AP013044.1 12229 11003 -1 - 1227 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) - none -
fig|6666666.229938.peg.10 CDS AP013044.1 14053 12338 -1 - 1716 putative acetylhydrolase - none -
fig|6666666.229938.peg.11 CDS AP013044.1 15543 14074 -3 - 1470 Internalin-like protein (LPXTG motif) Lmo0331 homolog - none -
fig|6666666.229938.peg.12 CDS AP013044.1 17583 15550 -3 - 2034 Endothelin-converting enzyme 1 precursor (EC 3.4.24.71) - none -
fig|6666666.229938.peg.13 CDS AP013044.1 18455 17841 -2 - 615 hypothetical protein - none -
fig|6666666.229938.peg.14 CDS AP013044.1 18769 19944 1 + 1176 Vitamin B12 ABC transporter, B12-binding component BtuF - none -
fig|6666666.229938.peg.15 CDS AP013044.1 19941 20978 3 + 1038 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229938.peg.16 CDS AP013044.1 20975 21988 2 + 1014 Ferric enterobactin transport ATP-binding protein FepC (TC 3.A.1.14.2) - none -
fig|6666666.229938.peg.17 CDS AP013044.1 23325 22069 -3 - 1257 Ketol-acid reductoisomerase (EC 1.1.1.86) Branched-Chain Amino Acid Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229938.peg.18 CDS AP013044.1 23560 24006 1 + 447 hypothetical protein - none -
fig|6666666.229938.peg.19 CDS AP013044.1 24043 24822 1 + 780 Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229938.peg.20 CDS AP013044.1 24810 25724 3 + 915 Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) De Novo Pyrimidine Synthesis
fig|6666666.229938.peg.21 CDS AP013044.1 25738 27999 1 + 2262 internalin-related protein - none -
fig|6666666.229938.peg.22 CDS AP013044.1 28063 29337 1 + 1275 Lysophospholipase (EC 3.1.1.5) Triacylglycerol metabolism
fig|6666666.229938.peg.23 CDS AP013044.1 29342 30043 2 + 702 Mg(2+) transport ATPase protein C Magnesium transport
fig|6666666.229938.peg.24 CDS AP013044.1 30446 30949 2 + 504 hypothetical protein - none -
fig|6666666.229938.peg.25 CDS AP013044.1 31264 32022 1 + 759 tRNA pseudouridine synthase A (EC 4.2.1.70) RNA pseudouridine syntheses;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229938.peg.26 CDS AP013044.1 32088 32921 3 + 834 putative permease - none -
fig|6666666.229938.peg.27 CDS AP013044.1 34240 32918 -1 - 1323 Cobyrinic acid A,C-diamide synthase Cobalamin synthesis
fig|6666666.229938.peg.28 CDS AP013044.1 37275 34753 -3 - 2523 FIG01093606: hypothetical protein - none -
fig|6666666.229938.peg.29 CDS AP013044.1 39127 37325 -1 - 1803 FIG00409833: hypothetical protein - none -
fig|6666666.229938.peg.30 CDS AP013044.1 42352 39158 -1 - 3195 TonB-dependent outer membrane receptor - none -
fig|6666666.229938.peg.31 CDS AP013044.1 43240 42425 -1 - 816 hypothetical protein - none -
fig|6666666.229938.peg.32 CDS AP013044.1 45187 43307 -1 - 1881 hypothetical protein - none -
fig|6666666.229938.peg.33 CDS AP013044.1 48230 45207 -2 - 3024 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.229938.peg.34 CDS AP013044.1 48444 48205 -3 - 240 hypothetical protein - none -
fig|6666666.229938.peg.35 CDS AP013044.1 49496 48642 -2 - 855 hypothetical protein - none -
fig|6666666.229938.peg.36 CDS AP013044.1 50441 53023 2 + 2583 Xanthan lyase - none -
fig|6666666.229938.peg.37 CDS AP013044.1 53077 54513 1 + 1437 Putative glycosyltransferase - none -
fig|6666666.229938.peg.38 CDS AP013044.1 54510 55445 3 + 936 putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide Rhamnose containing glycans
fig|6666666.229938.peg.39 CDS AP013044.1 55454 56770 2 + 1317 Amidase enhancer - none -
fig|6666666.229938.peg.40 CDS AP013044.1 56787 58088 3 + 1302 AmpG permease Recycling of Peptidoglycan Amino Acids
fig|6666666.229938.peg.41 CDS AP013044.1 58096 59334 1 + 1239 alternate gene name: yzbB - none -
fig|6666666.229938.peg.42 CDS AP013044.1 59606 60778 2 + 1173 N-acetylglucosamine related transporter, NagX Chitin and N-acetylglucosamine utilization
fig|6666666.229938.peg.43 CDS AP013044.1 60775 61626 1 + 852 FIG00404118: hypothetical protein - none -
fig|6666666.229938.peg.44 CDS AP013044.1 61623 62456 3 + 834 N-acetylmuramic acid 6-phosphate etherase - none -
fig|6666666.229938.peg.45 CDS AP013044.1 63672 62440 -3 - 1233 Haloacid dehalogenase-like hydrolase - none -
fig|6666666.229938.peg.46 CDS AP013044.1 64346 63705 -2 - 642 hypothetical protein - none -
fig|6666666.229938.peg.47 CDS AP013044.1 64440 64718 3 + 279 hypothetical protein - none -
fig|6666666.229938.peg.48 CDS AP013044.1 65156 66922 2 + 1767 Peptidase, S41 family - none -
fig|6666666.229938.peg.49 CDS AP013044.1 66930 68075 3 + 1146 Lanthionine biosynthesis cyclase LanC - none -
fig|6666666.229938.peg.50 CDS AP013044.1 68239 68355 1 + 117 IS1478 transposase - none -
fig|6666666.229938.peg.51 CDS AP013044.1 69132 70490 3 + 1359 hypothetical protein - none -
fig|6666666.229938.peg.52 CDS AP013044.1 70487 71989 2 + 1503 Possible regulatory protein - none -
fig|6666666.229938.peg.53 CDS AP013044.1 71970 73238 3 + 1269 hypothetical protein - none -
fig|6666666.229938.peg.54 CDS AP013044.1 73308 74459 3 + 1152 hypothetical protein - none -
fig|6666666.229938.peg.55 CDS AP013044.1 75192 74797 -3 - 396 Mobile element protein - none -
fig|6666666.229938.peg.56 CDS AP013044.1 75440 76669 2 + 1230 Mobile element protein - none -
fig|6666666.229938.peg.57 CDS AP013044.1 78103 79281 1 + 1179 hypothetical protein - none -
fig|6666666.229938.peg.58 CDS AP013044.1 79295 80791 2 + 1497 Possible regulatory protein - none -
fig|6666666.229938.peg.59 CDS AP013044.1 80749 82017 1 + 1269 hypothetical protein - none -
fig|6666666.229938.peg.60 CDS AP013044.1 82057 82854 1 + 798 ABC transporter ATP-binding protein - none -
fig|6666666.229938.peg.61 CDS AP013044.1 84023 83337 -2 - 687 Mobile element protein - none -
fig|6666666.229938.peg.62 CDS AP013044.1 84232 84363 1 + 132 hypothetical protein - none -
fig|6666666.229938.peg.63 CDS AP013044.1 84988 86283 1 + 1296 Arylsulfatase regulator - none -
fig|6666666.229938.peg.64 CDS AP013044.1 86348 87931 2 + 1584 Peptidase, S41 family - none -
fig|6666666.229938.peg.65 CDS AP013044.1 88540 89730 1 + 1191 ABC transporter ATP-binding protein - none -
fig|6666666.229938.peg.66 CDS AP013044.1 89997 90959 3 + 963 lipoprotein, putative - none -
fig|6666666.229938.peg.67 CDS AP013044.1 90969 92105 3 + 1137 lipoprotein, putative - none -
fig|6666666.229938.peg.68 CDS AP013044.1 92135 92275 2 + 141 hypothetical protein - none -
fig|6666666.229938.peg.69 CDS AP013044.1 92411 92944 2 + 534 hypothetical protein - none -
fig|6666666.229938.peg.70 CDS AP013044.1 93013 94152 1 + 1140 Glycosyltransferase - none -
fig|6666666.229938.peg.71 CDS AP013044.1 94190 95119 2 + 930 hypothetical protein - none -
fig|6666666.229938.peg.72 CDS AP013044.1 95946 97136 3 + 1191 Lanthionine biosynthesis cyclase LanC - none -
fig|6666666.229938.peg.73 CDS AP013044.1 97773 100043 3 + 2271 Peptidase, S41 family - none -
fig|6666666.229938.peg.74 CDS AP013044.1 101348 102568 2 + 1221 hypothetical protein - none -
fig|6666666.229938.peg.75 CDS AP013044.1 102573 104033 3 + 1461 Possible regulatory protein - none -
fig|6666666.229938.peg.76 CDS AP013044.1 104046 105221 3 + 1176 hypothetical protein - none -
fig|6666666.229938.peg.77 CDS AP013044.1 105288 107432 3 + 2145 ABC transporter ATP-binding protein - none -
fig|6666666.229938.peg.78 CDS AP013044.1 107443 108756 1 + 1314 putative hemolysin secretion protein - none -
fig|6666666.229938.peg.79 CDS AP013044.1 108758 109459 2 + 702 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.229938.peg.80 CDS AP013044.1 109573 110214 1 + 642 hypothetical protein - none -
fig|6666666.229938.peg.81 CDS AP013044.1 110274 110774 3 + 501 hypothetical protein - none -
fig|6666666.229938.peg.82 CDS AP013044.1 110743 111432 1 + 690 hypothetical protein - none -
fig|6666666.229938.peg.83 CDS AP013044.1 111469 112149 1 + 681 putative glycosyltransferase - none -
fig|6666666.229938.peg.84 CDS AP013044.1 113651 112254 -2 - 1398 Asparaginyl-tRNA synthetase (EC 6.1.1.22) tRNA aminoacylation, Asp and Asn
fig|6666666.229938.peg.85 CDS AP013044.1 114972 113674 -3 - 1299 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) RNA pseudouridine syntheses
fig|6666666.229938.peg.86 CDS AP013044.1 116401 115058 -1 - 1344 Adenylosuccinate lyase (EC 4.3.2.2) De Novo Purine Biosynthesis;
Purine conversions
fig|6666666.229938.peg.87 CDS AP013044.1 117646 116666 -1 - 981 transcriptional regulatory protein - none -
fig|6666666.229938.peg.88 CDS AP013044.1 118997 117783 -2 - 1215 conserved hypothetical lipoprotein - none -
fig|6666666.229938.peg.89 CDS AP013044.1 121393 119018 -1 - 2376 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229938.peg.90 CDS AP013044.1 121595 123340 2 + 1746 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229938.peg.91 CDS AP013044.1 123313 125040 1 + 1728 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229938.peg.92 CDS AP013044.1 125616 126920 3 + 1305 Anaerobic C4-dicarboxylate transporter - none -
fig|6666666.229938.peg.93 CDS AP013044.1 127375 127046 -1 - 330 hypothetical protein - none -
fig|6666666.229938.peg.94 CDS AP013044.1 127978 127388 -1 - 591 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAb@PabAb Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.229938.peg.95 CDS AP013044.1 128037 129005 3 + 969 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.229938.peg.96 CDS AP013044.1 129033 129665 3 + 633 Aminodeoxychorismate lyase (EC 4.1.3.38) # PabAc Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Folate Biosynthesis
fig|6666666.229938.peg.97 CDS AP013044.1 129979 132690 1 + 2712 Pyruvate formate-lyase (EC 2.3.1.54) Fermentations: Mixed acid
fig|6666666.229938.peg.98 CDS AP013044.1 132737 133000 2 + 264 hypothetical protein - none -
fig|6666666.229938.peg.99 CDS AP013044.1 133118 134356 2 + 1239 FIG00523991: hypothetical protein - none -
fig|6666666.229938.peg.100 CDS AP013044.1 134458 135411 1 + 954 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) Fermentations: Mixed acid
fig|6666666.229938.peg.101 CDS AP013044.1 135631 136560 1 + 930 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229938.peg.102 CDS AP013044.1 136661 137002 2 + 342 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229938.peg.103 CDS AP013044.1 137018 137830 2 + 813 NADPH-dependent glutamate synthase small chain - none -
fig|6666666.229938.peg.104 CDS AP013044.1 137827 139326 1 + 1500 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229938.peg.105 CDS AP013044.1 139434 139868 3 + 435 Lipoprotein - none -
fig|6666666.229938.peg.106 CDS AP013044.1 139929 140081 3 + 153 hypothetical protein - none -
fig|6666666.229938.peg.107 CDS AP013044.1 140121 140747 3 + 627 COG1051: ADP-ribose pyrophosphatase - none -
fig|6666666.229938.peg.108 CDS AP013044.1 141160 140744 -1 - 417 Large-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229938.peg.109 CDS AP013044.1 142579 141221 -1 - 1359 Na+/H+ antiporter NhaA type NhaA, NhaD and Sodium-dependent phosphate transporters
fig|6666666.229938.peg.110 CDS AP013044.1 143507 142758 -2 - 750 Two-component system response regulator - none -
fig|6666666.229938.peg.111 CDS AP013044.1 144514 143495 -1 - 1020 putative two-component system sensor protein, no kinase domain - none -
fig|6666666.229938.peg.112 CDS AP013044.1 144710 145660 2 + 951 hypothetical protein - none -
fig|6666666.229938.peg.113 CDS AP013044.1 146917 145967 -1 - 951 putative FtsX-related transmembrane transport protein - none -
fig|6666666.229938.peg.114 CDS AP013044.1 148341 146884 -3 - 1458 putative FtsX-related transmembrane transport protein - none -
fig|6666666.229938.peg.115 CDS AP013044.1 149190 148516 -3 - 675 ABC transporter ATP-binding protein - none -
fig|6666666.229938.peg.116 CDS AP013044.1 151817 149493 -2 - 2325 FIG00897059: hypothetical protein - none -
fig|6666666.229938.peg.117 CDS AP013044.1 154484 152121 -2 - 2364 FIG00898232: hypothetical protein - none -
fig|6666666.229938.peg.118 CDS AP013044.1 156064 154811 -1 - 1254 ABC transporter permease - none -
fig|6666666.229938.peg.119 CDS AP013044.1 157548 156226 -3 - 1323 Type I secretion system, outer membrane component LapE - none -
fig|6666666.229938.peg.120 CDS AP013044.1 157847 161368 2 + 3522 hypothetical protein - none -
fig|6666666.229938.peg.121 CDS AP013044.1 161365 162723 1 + 1359 Two-component system response regulator - none -
fig|6666666.229938.peg.122 CDS AP013044.1 162729 164042 3 + 1314 Sensor histidine kinase - none -
fig|6666666.229938.peg.123 CDS AP013044.1 164093 164587 2 + 495 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) DNA repair, bacterial
fig|6666666.229938.peg.124 CDS AP013044.1 165152 165538 2 + 387 hypothetical protein - none -
fig|6666666.229938.peg.125 CDS AP013044.1 165567 167957 3 + 2391 putative TonB-dependent receptor - none -
fig|6666666.229938.peg.126 CDS AP013044.1 168000 168575 3 + 576 membrane protein, putative - none -
fig|6666666.229938.peg.127 CDS AP013044.1 168595 168882 1 + 288 Transcriptional regulators, marR/emrR family - none -
fig|6666666.229938.peg.128 CDS AP013044.1 170306 168984 -2 - 1323 Alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.129 CDS AP013044.1 171588 170320 -3 - 1269 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.229938.peg.130 CDS AP013044.1 172794 171604 -3 - 1191 Putative glycogen debranching enzyme, archaeal type, TIGR01561 Glycogen metabolism
fig|6666666.229938.peg.131 CDS AP013044.1 173539 172757 -1 - 783 Putative glycogen debranching enzyme, archaeal type, TIGR01561 Glycogen metabolism
fig|6666666.229938.peg.132 CDS AP013044.1 173746 173573 -1 - 174 hypothetical protein - none -
fig|6666666.229938.peg.133 CDS AP013044.1 173807 173926 2 + 120 hypothetical protein - none -
fig|6666666.229938.peg.134 CDS AP013044.1 175633 173960 -1 - 1674 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - none -
fig|6666666.229938.peg.135 CDS AP013044.1 176233 175679 -1 - 555 Transcriptional regulator - none -
fig|6666666.229938.peg.136 CDS AP013044.1 176941 176366 -1 - 576 hypothetical protein - none -
fig|6666666.229938.peg.137 CDS AP013044.1 177622 177038 -1 - 585 Dephospho-CoA kinase (EC 2.7.1.24) Coenzyme A Biosynthesis
fig|6666666.229938.peg.138 CDS AP013044.1 178623 177619 -3 - 1005 hypothetical protein - none -
fig|6666666.229938.peg.139 CDS AP013044.1 178972 178634 -1 - 339 Preprotein translocase subunit YajC (TC 3.A.5.1.1) CBSS-211586.1.peg.2832
fig|6666666.229938.peg.140 CDS AP013044.1 179965 179054 -1 - 912 Transcription termination protein NusB Transcription factors bacterial
fig|6666666.229938.peg.141 CDS AP013044.1 181174 180134 -1 - 1041 L-asparaginase (EC 3.5.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229938.peg.142 CDS AP013044.1 181525 182289 1 + 765 unknown - none -
fig|6666666.229938.peg.143 CDS AP013044.1 183333 182458 -3 - 876 Beta-glucanase precursor (EC 3.2.1.73) - none -
fig|6666666.229938.peg.144 CDS AP013044.1 184955 183417 -2 - 1539 hypothetical protein - none -
fig|6666666.229938.peg.145 CDS AP013044.1 188329 184964 -1 - 3366 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.146 CDS AP013044.1 189475 188498 -1 - 978 putative anti-sigma factor - none -
fig|6666666.229938.peg.147 CDS AP013044.1 190123 189542 -1 - 582 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.148 CDS AP013044.1 190481 190362 -2 - 120 hypothetical protein - none -
fig|6666666.229938.peg.149 CDS AP013044.1 190524 193478 3 + 2955 FIG00897767: hypothetical protein - none -
fig|6666666.229938.peg.150 CDS AP013044.1 193640 194674 2 + 1035 Phosphoserine aminotransferase (EC 2.6.1.52) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229938.peg.151 CDS AP013044.1 194702 195076 2 + 375 Conserved protein - none -
fig|6666666.229938.peg.152 CDS AP013044.1 195103 196023 1 + 921 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Glycine and Serine Utilization;
Pyridoxin (Vitamin B6) Biosynthesis;
Serine Biosynthesis
fig|6666666.229938.peg.153 CDS AP013044.1 196117 197361 1 + 1245 FIG008208: hypothetical protein - none -
fig|6666666.229938.peg.154 CDS AP013044.1 197444 198043 2 + 600 Haloacid dehalogenase-like hydrolase - none -
fig|6666666.229938.peg.155 CDS AP013044.1 198040 198159 1 + 120 hypothetical protein - none -
fig|6666666.229938.peg.156 CDS AP013044.1 198280 198729 1 + 450 sigma factor - none -
fig|6666666.229938.peg.157 CDS AP013044.1 198789 199010 3 + 222 hypothetical protein - none -
fig|6666666.229938.peg.158 CDS AP013044.1 199226 199384 2 + 159 hypothetical protein - none -
fig|6666666.229938.peg.159 CDS AP013044.1 199398 200633 3 + 1236 hypothetical protein - none -
fig|6666666.229938.peg.160 CDS AP013044.1 201211 202776 1 + 1566 FIG00471280: hypothetical protein - none -
fig|6666666.229938.peg.161 CDS AP013044.1 202779 203342 3 + 564 DUF324 domain-containing protein CRISPR-associated cluster
fig|6666666.229938.peg.162 CDS AP013044.1 203339 204829 2 + 1491 FIG00470522: hypothetical protein - none -
fig|6666666.229938.peg.163 CDS AP013044.1 204826 206244 1 + 1419 DUF324 domain-containing protein CRISPR-associated cluster
fig|6666666.229938.peg.164 CDS AP013044.1 206241 206627 3 + 387 hypothetical protein - none -
fig|6666666.229938.peg.165 CDS AP013044.1 206630 209002 2 + 2373 DUF324 domain-containing protein CRISPR-associated cluster
fig|6666666.229938.peg.166 CDS AP013044.1 209188 210333 1 + 1146 hypothetical protein - none -
fig|6666666.229938.peg.167 CDS AP013044.1 210337 211629 1 + 1293 CRISPR-associated protein TM1812 - none -
fig|6666666.229938.peg.168 CDS AP013044.1 211724 212008 2 + 285 hypothetical protein - none -
fig|6666666.229938.peg.169 CDS AP013044.1 212219 212980 2 + 762 IS1478 transposase - none -
fig|6666666.229938.peg.170 CDS AP013044.1 213415 213047 -1 - 369 probable uroporphyrin-III c-methyltransferase (EC 2.1.1.107) - none -
fig|6666666.229938.peg.171 CDS AP013044.1 213688 213563 -1 - 126 hypothetical protein - none -
fig|6666666.229938.peg.172 CDS AP013044.1 214043 213849 -2 - 195 hypothetical protein - none -
fig|6666666.229938.peg.173 CDS AP013044.1 214218 216281 3 + 2064 DNA ligase (EC 6.5.1.2) DNA Repair Base Excision
fig|6666666.229938.peg.174 CDS AP013044.1 216278 216808 2 + 531 hypothetical protein - none -
fig|6666666.229938.peg.175 CDS AP013044.1 216832 217725 1 + 894 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229938.peg.176 CDS AP013044.1 218628 217819 -3 - 810 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) - none -
fig|6666666.229938.peg.177 CDS AP013044.1 219662 218652 -2 - 1011 L-rhamnose-proton symporter - none -
fig|6666666.229938.peg.178 CDS AP013044.1 220973 219687 -2 - 1287 L-rhamnose isomerase (EC 5.3.1.14) - none -
fig|6666666.229938.peg.179 CDS AP013044.1 222466 220985 -1 - 1482 Rhamnulokinase (EC 2.7.1.5) - none -
fig|6666666.229938.peg.180 CDS AP013044.1 223087 222524 -1 - 564 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.181 CDS AP013044.1 223604 223248 -2 - 357 hypothetical protein - none -
fig|6666666.229938.peg.182 CDS AP013044.1 225139 223655 -1 - 1485 Prolyl-tRNA synthetase (EC 6.1.1.15), archaeal/eukaryal type tRNA aminoacylation, Pro
fig|6666666.229938.peg.183 CDS AP013044.1 225982 225161 -1 - 822 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster
fig|6666666.229938.peg.184 CDS AP013044.1 227459 226185 -2 - 1275 Peptidase, S41 family - none -
fig|6666666.229938.peg.185 CDS AP013044.1 227659 228333 1 + 675 LemA protein CBSS-393011.11.peg.386
fig|6666666.229938.peg.186 CDS AP013044.1 228389 229300 2 + 912 Heat shock protein HtpX (EC 3.4.24.-) CBSS-393011.11.peg.386
fig|6666666.229938.peg.187 CDS AP013044.1 229335 229799 3 + 465 Alanyl-tRNA synthetase domain protein tRNA aminoacylation, Ala
fig|6666666.229938.peg.188 CDS AP013044.1 229965 231227 3 + 1263 Phosphoglycerate kinase (EC 2.7.2.3) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229938.peg.189 CDS AP013044.1 231272 232672 2 + 1401 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229938.peg.190 CDS AP013044.1 233291 232689 -2 - 603 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD
fig|6666666.229938.peg.191 CDS AP013044.1 235036 233306 -1 - 1731 Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90) Glycolysis and Gluconeogenesis
fig|6666666.229938.peg.192 CDS AP013044.1 235190 235570 2 + 381 Transcriptional repressor, BlaI/MecI family - none -
fig|6666666.229938.peg.193 CDS AP013044.1 235577 237019 2 + 1443 Regulatory sensor-transducer, BlaR1/MecR1 family / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.194 CDS AP013044.1 237028 237183 1 + 156 hypothetical protein - none -
fig|6666666.229938.peg.195 CDS AP013044.1 237406 237284 -1 - 123 hypothetical protein - none -
fig|6666666.229938.peg.196 CDS AP013044.1 238640 244072 2 + 5433 hypothetical protein - none -
fig|6666666.229938.peg.197 CDS AP013044.1 245418 244267 -3 - 1152 Chaperone protein DnaJ GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229938.peg.198 CDS AP013044.1 246057 245446 -3 - 612 Heat shock protein GrpE GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229938.peg.199 CDS AP013044.1 246278 247699 2 + 1422 PDZ domain protein - none -
fig|6666666.229938.peg.200 CDS AP013044.1 247723 250203 1 + 2481 Recombination inhibitory protein MutS2 DNA repair, bacterial MutL-MutS system
fig|6666666.229938.peg.201 CDS AP013044.1 251279 250302 -2 - 978 dihydroorotate dehydrogenase - none -
fig|6666666.229938.peg.202 CDS AP013044.1 252029 251364 -2 - 666 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC - none -
fig|6666666.229938.peg.203 CDS AP013044.1 252499 252026 -1 - 474 FIG00896819: hypothetical protein - none -
fig|6666666.229938.peg.204 CDS AP013044.1 253044 252508 -3 - 537 Ribosomal-protein-L7p-serine acetyltransferase Ribosome biogenesis bacterial
fig|6666666.229938.peg.205 CDS AP013044.1 253217 253375 2 + 159 hypothetical protein - none -
fig|6666666.229938.peg.206 CDS AP013044.1 253942 254871 1 + 930 hypothetical protein - none -
fig|6666666.229938.peg.207 CDS AP013044.1 258698 255351 -2 - 3348 Transcription-repair coupling factor Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229938.peg.208 CDS AP013044.1 260488 258782 -1 - 1707 Acyl-CoA dehydrogenase (EC 1.3.8.7) - none -
fig|6666666.229938.peg.209 CDS AP013044.1 261516 260497 -3 - 1020 Electron transfer flavoprotein, alpha subunit - none -
fig|6666666.229938.peg.210 CDS AP013044.1 262656 261775 -3 - 882 Electron transfer flavoprotein, beta subunit - none -
fig|6666666.229938.peg.211 CDS AP013044.1 262913 262785 -2 - 129 hypothetical protein - none -
fig|6666666.229938.peg.212 CDS AP013044.1 263882 263076 -2 - 807 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) A Gammaproteobacteria Cluster Relating to Translation
fig|6666666.229938.peg.213 CDS AP013044.1 264697 263909 -1 - 789 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229938.peg.214 CDS AP013044.1 265069 264953 -1 - 117 hypothetical protein - none -
fig|6666666.229938.peg.215 CDS AP013044.1 265329 265135 -3 - 195 hypothetical protein - none -
fig|6666666.229938.peg.216 CDS AP013044.1 266422 265412 -1 - 1011 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Redox-dependent regulation of nucleus processes
fig|6666666.229938.peg.217 CDS AP013044.1 266708 266583 -2 - 126 hypothetical protein - none -
fig|6666666.229938.peg.218 CDS AP013044.1 266986 266672 -1 - 315 hypothetical protein - none -
fig|6666666.229938.peg.219 CDS AP013044.1 267419 267018 -2 - 402 hypothetical protein - none -
fig|6666666.229938.peg.220 CDS AP013044.1 267622 267434 -1 - 189 hypothetical protein - none -
fig|6666666.229938.peg.221 CDS AP013044.1 268629 267775 -3 - 855 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
Ribosome biogenesis bacterial
fig|6666666.229938.peg.222 CDS AP013044.1 268976 269176 2 + 201 hypothetical protein - none -
fig|6666666.229938.peg.223 CDS AP013044.1 270046 269435 -1 - 612 two component transcriptional regulator, LuxR family - none -
fig|6666666.229938.peg.224 CDS AP013044.1 271953 270043 -3 - 1911 sensor histidine kinase - none -
fig|6666666.229938.peg.225 CDS AP013044.1 273324 272056 -3 - 1269 ATPase - none -
fig|6666666.229938.peg.226 CDS AP013044.1 274590 273331 -3 - 1260 FIG074102: hypothetical protein - none -
fig|6666666.229938.peg.227 CDS AP013044.1 274623 276482 3 + 1860 BNR repeat domain protein - none -
fig|6666666.229938.peg.228 CDS AP013044.1 276669 277142 3 + 474 DNA-binding protein, histone-like family - none -
fig|6666666.229938.peg.229 CDS AP013044.1 277343 277224 -2 - 120 hypothetical protein - none -
fig|6666666.229938.peg.230 CDS AP013044.1 277342 277683 1 + 342 hypothetical protein - none -
fig|6666666.229938.peg.231 CDS AP013044.1 278139 278285 3 + 147 hypothetical protein - none -
fig|6666666.229938.peg.232 CDS AP013044.1 278344 279354 1 + 1011 Integral membrane protein - none -
fig|6666666.229938.peg.233 CDS AP013044.1 279363 280592 3 + 1230 surface proteins containing Ig-like domains-like - none -
fig|6666666.229938.peg.234 CDS AP013044.1 280623 281306 3 + 684 hypothetical protein - none -
fig|6666666.229938.peg.235 CDS AP013044.1 281359 281652 1 + 294 hypothetical protein - none -
fig|6666666.229938.peg.236 CDS AP013044.1 281753 282001 2 + 249 tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.229938.peg.237 CDS AP013044.1 282833 282108 -2 - 726 hypothetical protein - none -
fig|6666666.229938.peg.238 CDS AP013044.1 283840 283247 -1 - 594 hypothetical protein - none -
fig|6666666.229938.peg.239 CDS AP013044.1 284974 283862 -1 - 1113 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229938.peg.240 CDS AP013044.1 285224 285069 -2 - 156 hypothetical protein - none -
fig|6666666.229938.peg.241 CDS AP013044.1 285438 285250 -3 - 189 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent Ribosome LSU bacterial;
Ribosome LSU bacterial
fig|6666666.229938.peg.242 CDS AP013044.1 285702 285463 -3 - 240 LSU ribosomal protein L28p Ribosome LSU bacterial
fig|6666666.229938.peg.243 CDS AP013044.1 287118 286339 -3 - 780 lipase/acylhydrolase family protein - none -
fig|6666666.229938.peg.244 CDS AP013044.1 287696 287199 -2 - 498 FIG042921: similarity to aminoacyl-tRNA editing enzymes YbaK, ProX - none -
fig|6666666.229938.peg.245 CDS AP013044.1 288528 287716 -3 - 813 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.229938.peg.246 CDS AP013044.1 289396 290901 1 + 1506 FIG00404818: hypothetical protein - none -
fig|6666666.229938.peg.247 CDS AP013044.1 291291 294329 3 + 3039 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.248 CDS AP013044.1 294389 295864 2 + 1476 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.249 CDS AP013044.1 295895 299029 2 + 3135 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229938.peg.250 CDS AP013044.1 299067 299318 3 + 252 hypothetical protein - none -
fig|6666666.229938.peg.251 CDS AP013044.1 299405 299971 2 + 567 putative surface protein - none -
fig|6666666.229938.peg.252 CDS AP013044.1 300098 300937 2 + 840 metallo-beta-lactamase family protein - none -
fig|6666666.229938.peg.253 CDS AP013044.1 301320 300940 -3 - 381 COGs COG3339 - none -
fig|6666666.229938.peg.254 CDS AP013044.1 301481 303274 2 + 1794 L-fucose isomerase (EC 5.3.1.25) - none -
fig|6666666.229938.peg.255 CDS AP013044.1 303271 304599 1 + 1329 Fucose permease - none -
fig|6666666.229938.peg.256 CDS AP013044.1 304915 306054 1 + 1140 FMN adenylyltransferase, type 3 archaeal (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229938.peg.257 CDS AP013044.1 306059 306949 2 + 891 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229938.peg.258 CDS AP013044.1 307196 308338 2 + 1143 outer membrane protein OmpA - none -
fig|6666666.229938.peg.259 CDS AP013044.1 308438 310888 2 + 2451 Putative cytochrome C-type biogenesis protein Biogenesis of c-type cytochromes
fig|6666666.229938.peg.260 CDS AP013044.1 310878 313418 3 + 2541 ApeH acylamino-acid-releasing enzyme (EC 3.4.19.1) - none -
fig|6666666.229938.peg.261 CDS AP013044.1 313477 313827 1 + 351 hypothetical protein - none -
fig|6666666.229938.peg.262 CDS AP013044.1 313820 316081 2 + 2262 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.229938.peg.263 CDS AP013044.1 316107 316979 3 + 873 FIG00898779: hypothetical protein - none -
fig|6666666.229938.peg.264 CDS AP013044.1 318313 316991 -1 - 1323 BexA, membrane protein - none -
fig|6666666.229938.peg.265 CDS AP013044.1 318736 318386 -1 - 351 Aspartate 1-decarboxylase (EC 4.1.1.11) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.229938.peg.266 CDS AP013044.1 319558 318758 -1 - 801 Pantoate--beta-alanine ligase (EC 6.3.2.1) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis cluster;
Folate biosynthesis cluster
fig|6666666.229938.peg.267 CDS AP013044.1 319732 320604 1 + 873 Similar to glycogen synthase (EC 2.4.1.21) - none -
fig|6666666.229938.peg.268 CDS AP013044.1 320606 322024 2 + 1419 hypothetical protein - none -
fig|6666666.229938.peg.269 CDS AP013044.1 322383 323777 3 + 1395 IS1478 transposase - none -
fig|6666666.229938.peg.270 CDS AP013044.1 323810 323959 2 + 150 hypothetical protein - none -
fig|6666666.229938.peg.271 CDS AP013044.1 324211 324813 1 + 603 hypothetical protein - none -
fig|6666666.229938.peg.272 CDS AP013044.1 324839 325096 2 + 258 hypothetical protein - none -
fig|6666666.229938.peg.273 CDS AP013044.1 325133 327115 2 + 1983 hypothetical protein - none -
fig|6666666.229938.peg.274 CDS AP013044.1 327374 327721 2 + 348 hypothetical protein - none -
fig|6666666.229938.peg.275 CDS AP013044.1 327754 328617 1 + 864 hypothetical protein - none -
fig|6666666.229938.peg.276 CDS AP013044.1 328713 329267 3 + 555 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229938.peg.277 CDS AP013044.1 329298 330218 3 + 921 putative transcriptional regulator - none -
fig|6666666.229938.peg.278 CDS AP013044.1 330427 331632 1 + 1206 FIG00936974: hypothetical protein - none -
fig|6666666.229938.peg.279 CDS AP013044.1 331665 332444 3 + 780 putative polysaccharide deacetylase - none -
fig|6666666.229938.peg.280 CDS AP013044.1 332567 332926 2 + 360 Transcriptional regulator, MecI family - none -
fig|6666666.229938.peg.281 CDS AP013044.1 332933 334798 2 + 1866 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229938.peg.282 CDS AP013044.1 335078 336214 2 + 1137 hypothetical protein - none -
fig|6666666.229938.peg.283 CDS AP013044.1 336389 337438 2 + 1050 hypothetical protein - none -
fig|6666666.229938.peg.284 CDS AP013044.1 337577 338590 2 + 1014 hypothetical protein - none -
fig|6666666.229938.peg.285 CDS AP013044.1 338873 340843 2 + 1971 hypothetical protein - none -
fig|6666666.229938.peg.286 CDS AP013044.1 341482 341291 -1 - 192 hypothetical protein - none -
fig|6666666.229938.peg.287 CDS AP013044.1 341698 342711 1 + 1014 hypothetical protein - none -
fig|6666666.229938.peg.288 CDS AP013044.1 343513 344022 1 + 510 hypothetical protein - none -
fig|6666666.229938.peg.289 CDS AP013044.1 344715 345509 3 + 795 hypothetical protein - none -
fig|6666666.229938.peg.290 CDS AP013044.1 345535 346455 1 + 921 hypothetical protein - none -
fig|6666666.229938.peg.291 CDS AP013044.1 346462 348084 1 + 1623 FIG00896341: hypothetical protein - none -
fig|6666666.229938.peg.292 CDS AP013044.1 348088 348981 1 + 894 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.229938.peg.293 CDS AP013044.1 349593 349477 -3 - 117 hypothetical protein - none -
fig|6666666.229938.peg.294 CDS AP013044.1 349673 350785 2 + 1113 hypothetical protein - none -
fig|6666666.229938.peg.295 CDS AP013044.1 351041 351163 2 + 123 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.229938.peg.296 CDS AP013044.1 351227 352312 2 + 1086 hypothetical protein - none -
fig|6666666.229938.peg.297 CDS AP013044.1 352585 352833 1 + 249 hypothetical protein - none -
fig|6666666.229938.peg.298 CDS AP013044.1 352911 353963 3 + 1053 hypothetical protein - none -
fig|6666666.229938.peg.299 CDS AP013044.1 354435 354917 3 + 483 hypothetical protein - none -
fig|6666666.229938.peg.300 CDS AP013044.1 354924 356567 3 + 1644 FIG00896341: hypothetical protein - none -
fig|6666666.229938.peg.301 CDS AP013044.1 356542 357444 1 + 903 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.229938.peg.302 CDS AP013044.1 357523 358608 1 + 1086 hypothetical protein - none -
fig|6666666.229938.peg.303 CDS AP013044.1 359739 358747 -3 - 993 Glycosyltransferase - none -
fig|6666666.229938.peg.304 CDS AP013044.1 361906 359756 -1 - 2151 FIG00936757: hypothetical protein - none -
fig|6666666.229938.peg.305 CDS AP013044.1 363264 361903 -3 - 1362 FIG00761799: membrane protein - none -
fig|6666666.229938.peg.306 CDS AP013044.1 364778 363264 -2 - 1515 Polysaccharide biosynthesis protein - none -
fig|6666666.229938.peg.307 CDS AP013044.1 365815 364784 -1 - 1032 Holliday junction DNA helicase RuvB RuvABC plus a hypothetical
fig|6666666.229938.peg.308 CDS AP013044.1 366207 367313 3 + 1107 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229938.peg.309 CDS AP013044.1 367359 368525 3 + 1167 hypothetical protein - none -
fig|6666666.229938.peg.310 CDS AP013044.1 368576 368764 2 + 189 hypothetical protein - none -
fig|6666666.229938.peg.311 CDS AP013044.1 368847 370016 3 + 1170 hypothetical protein - none -
fig|6666666.229938.peg.312 CDS AP013044.1 370812 371057 3 + 246 Probable transposase - none -
fig|6666666.229938.peg.313 CDS AP013044.1 371041 371217 1 + 177 hypothetical protein - none -
fig|6666666.229938.peg.314 CDS AP013044.1 371230 374322 1 + 3093 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.229938.peg.315 CDS AP013044.1 374332 375855 1 + 1524 outer membrane protein TolC, putative - none -
fig|6666666.229938.peg.316 CDS AP013044.1 375856 379044 1 + 3189 Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229938.peg.317 CDS AP013044.1 379115 379960 2 + 846 hypothetical protein - none -
fig|6666666.229938.peg.318 CDS AP013044.1 380096 382015 2 + 1920 putative TonB-dependent receptor - none -
fig|6666666.229938.peg.319 CDS AP013044.1 382084 382227 1 + 144 hypothetical protein - none -
fig|6666666.229938.peg.320 CDS AP013044.1 382822 382190 -1 - 633 yadS protein - none -
fig|6666666.229938.peg.321 CDS AP013044.1 383031 382882 -3 - 150 hypothetical protein - none -
fig|6666666.229938.peg.322 CDS AP013044.1 383143 386379 1 + 3237 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.229938.peg.323 CDS AP013044.1 386412 388172 3 + 1761 FIG00898800: hypothetical protein - none -
fig|6666666.229938.peg.324 CDS AP013044.1 388856 388377 -2 - 480 Transamidase GatB domain protein Macromolecular synthesis operon
fig|6666666.229938.peg.325 CDS AP013044.1 390233 388860 -2 - 1374 Cell division protein FtsZ (EC 3.4.24.-) Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229938.peg.326 CDS AP013044.1 391568 390246 -2 - 1323 Cell division protein FtsA Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229938.peg.327 CDS AP013044.1 392301 391573 -3 - 729 Cell division protein FtsQ Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ;
cell division core of larger cluster
fig|6666666.229938.peg.328 CDS AP013044.1 393677 392298 -2 - 1380 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229938.peg.329 CDS AP013044.1 394789 393674 -1 - 1116 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) cell division core of larger cluster
fig|6666666.229938.peg.330 CDS AP013044.1 396083 394776 -2 - 1308 Cell division protein FtsW Bacterial Cell Division;
Bacterial Cytoskeleton;
cell division cluster containing FtsQ
fig|6666666.229938.peg.331 CDS AP013044.1 397434 396097 -3 - 1338 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) Peptidoglycan biosynthesis--gjo
fig|6666666.229938.peg.332 CDS AP013044.1 398729 397437 -2 - 1293 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) - none -
fig|6666666.229938.peg.333 CDS AP013044.1 400173 398710 -3 - 1464 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) Peptidoglycan biosynthesis--gjo
fig|6666666.229938.peg.334 CDS AP013044.1 402396 400186 -3 - 2211 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
CBSS-83331.1.peg.3039
fig|6666666.229938.peg.335 CDS AP013044.1 402756 402403 -3 - 354 Cell division protein FtsL 16S rRNA modification within P site of ribosome;
Bacterial Cell Division;
Bacterial Cytoskeleton;
Stationary phase repair cluster
fig|6666666.229938.peg.336 CDS AP013044.1 403678 402764 -1 - 915 rRNA small subunit methyltransferase H 16S rRNA modification within P site of ribosome;
Bacterial Cell Division
fig|6666666.229938.peg.337 CDS AP013044.1 403944 404771 3 + 828 Hemolysin A - none -
fig|6666666.229938.peg.338 CDS AP013044.1 404776 405753 1 + 978 Hemolysin A - none -
fig|6666666.229938.peg.339 CDS AP013044.1 406313 405870 -2 - 444 Ribose 5-phosphate isomerase B (EC 5.3.1.6) D-ribose utilization;
Pentose phosphate pathway
fig|6666666.229938.peg.340 CDS AP013044.1 408357 406324 -3 - 2034 Transketolase (EC 2.2.1.1) Pentose phosphate pathway
fig|6666666.229938.peg.341 CDS AP013044.1 409906 408413 -1 - 1494 Acetyl-CoA hydrolase (EC 3.1.2.1) - none -
fig|6666666.229938.peg.342 CDS AP013044.1 410629 409967 -1 - 663 Phosphoglycolate phosphatase (EC 3.1.3.18) 2-phosphoglycolate salvage;
Glycolate, glyoxylate interconversions
fig|6666666.229938.peg.343 CDS AP013044.1 410782 410639 -1 - 144 hypothetical protein - none -
fig|6666666.229938.peg.344 CDS AP013044.1 411214 411083 -1 - 132 hypothetical protein - none -
fig|6666666.229938.peg.345 CDS AP013044.1 413441 411318 -2 - 2124 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.346 CDS AP013044.1 414373 413438 -1 - 936 hypothetical protein - none -
fig|6666666.229938.peg.347 CDS AP013044.1 415038 414406 -3 - 633 hypothetical protein - none -
fig|6666666.229938.peg.348 CDS AP013044.1 415368 415201 -3 - 168 hypothetical protein - none -
fig|6666666.229938.peg.349 CDS AP013044.1 415616 416974 2 + 1359 Hemagglutinin-like protein - none -
fig|6666666.229938.peg.350 CDS AP013044.1 417071 418681 2 + 1611 putative hemin receptor - none -
fig|6666666.229938.peg.351 CDS AP013044.1 418899 419492 3 + 594 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.229938.peg.352 CDS AP013044.1 419888 420538 2 + 651 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Conserved gene cluster associated with Met-tRNA formyltransferase;
Pentose phosphate pathway
fig|6666666.229938.peg.353 CDS AP013044.1 420562 421824 1 + 1263 Competence protein - none -
fig|6666666.229938.peg.354 CDS AP013044.1 422832 421972 -3 - 861 RNA polymerase sigma factor RpoD CBSS-349161.4.peg.2417;
Macromolecular synthesis operon;
Transcription initiation, bacterial sigma factors
fig|6666666.229938.peg.355 CDS AP013044.1 424449 422950 -3 - 1500 HtrA protease/chaperone protein Periplasmic Stress Response
fig|6666666.229938.peg.356 CDS AP013044.1 426358 424724 -1 - 1635 FIG00898002: hypothetical protein - none -
fig|6666666.229938.peg.357 CDS AP013044.1 428326 426377 -1 - 1950 FIG00897375: hypothetical protein - none -
fig|6666666.229938.peg.358 CDS AP013044.1 429398 428544 -2 - 855 sugar phosphate isomerase/epimerase - none -
fig|6666666.229938.peg.359 CDS AP013044.1 430432 429536 -1 - 897 hypothetical protein - none -
fig|6666666.229938.peg.360 CDS AP013044.1 430541 432061 2 + 1521 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) Purine conversions
fig|6666666.229938.peg.361 CDS AP013044.1 432080 433024 2 + 945 putative transporter - none -
fig|6666666.229938.peg.362 CDS AP013044.1 433336 434916 1 + 1581 hypothetical protein - none -
fig|6666666.229938.peg.363 CDS AP013044.1 435722 434913 -2 - 810 FIG00898155: hypothetical protein - none -
fig|6666666.229938.peg.364 CDS AP013044.1 437192 435741 -2 - 1452 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Pentose phosphate pathway
fig|6666666.229938.peg.365 CDS AP013044.1 438655 437324 -1 - 1332 DNA-damage-inducible protein F - none -
fig|6666666.229938.peg.366 CDS AP013044.1 439841 438663 -2 - 1179 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229938.peg.367 CDS AP013044.1 440398 439946 -1 - 453 probable beta-D-galactosidase Galactosylceramide and Sulfatide metabolism
fig|6666666.229938.peg.368 CDS AP013044.1 440413 440622 1 + 210 hypothetical protein - none -
fig|6666666.229938.peg.369 CDS AP013044.1 441945 440626 -3 - 1320 TldE protein, part of TldE/TldD proteolytic complex Putative TldE-TldD proteolytic complex
fig|6666666.229938.peg.370 CDS AP013044.1 443485 441947 -1 - 1539 TldD protein, part of TldE/TldD proteolytic complex CBSS-354.1.peg.2917;
Putative TldE-TldD proteolytic complex
fig|6666666.229938.peg.371 CDS AP013044.1 443492 444241 2 + 750 FIG00897850: hypothetical protein - none -
fig|6666666.229938.peg.372 CDS AP013044.1 444266 447655 2 + 3390 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229938.peg.373 CDS AP013044.1 449129 447771 -2 - 1359 tRNA-i(6)A37 methylthiotransferase Methylthiotransferases;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229938.peg.374 CDS AP013044.1 450022 449186 -1 - 837 endonuclease/exonuclease/phosphatase family protein - none -
fig|6666666.229938.peg.375 CDS AP013044.1 450805 450053 -1 - 753 Acyl-ACP thioesterase - none -
fig|6666666.229938.peg.376 CDS AP013044.1 451467 450919 -3 - 549 hypothetical protein - none -
fig|6666666.229938.peg.377 CDS AP013044.1 451869 451741 -3 - 129 hypothetical protein - none -
fig|6666666.229938.peg.378 CDS AP013044.1 452612 451920 -2 - 693 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229938.peg.379 CDS AP013044.1 453331 452612 -1 - 720 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229938.peg.380 CDS AP013044.1 454146 453325 -3 - 822 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Entner-Doudoroff Pathway;
Pentose phosphate pathway
fig|6666666.229938.peg.381 CDS AP013044.1 454145 454318 2 + 174 hypothetical protein - none -
fig|6666666.229938.peg.382 CDS AP013044.1 455628 454300 -3 - 1329 putative outer membrane efflux protein - none -
fig|6666666.229938.peg.383 CDS AP013044.1 456796 455678 -1 - 1119 Membrane fusion efflux protein - none -
fig|6666666.229938.peg.384 CDS AP013044.1 458074 456818 -1 - 1257 ABC transporter permease protein - none -
fig|6666666.229938.peg.385 CDS AP013044.1 459366 458089 -3 - 1278 ABC transporter permease protein - none -
fig|6666666.229938.peg.386 CDS AP013044.1 460031 459360 -2 - 672 ABC transporter ATP-binding protein YvcR - none -
fig|6666666.229938.peg.387 CDS AP013044.1 460134 460280 3 + 147 hypothetical protein - none -
fig|6666666.229938.peg.388 CDS AP013044.1 461277 460435 -3 - 843 Neopullulanase (EC 3.2.1.135) Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.389 CDS AP013044.1 462283 461261 -1 - 1023 Neopullulanase (EC 3.2.1.135) Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.390 CDS AP013044.1 462663 463898 3 + 1236 Integrase - none -
fig|6666666.229938.peg.391 CDS AP013044.1 463917 464279 3 + 363 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) ABC transporter alkylphosphonate (TC 3.A.1.9.1)
fig|6666666.229938.peg.392 CDS AP013044.1 464745 464341 -3 - 405 hypothetical protein - none -
fig|6666666.229938.peg.393 CDS AP013044.1 464879 465193 2 + 315 Transcriptional regulator, HxlR family - none -
fig|6666666.229938.peg.394 CDS AP013044.1 465337 466095 1 + 759 DNA-damage-inducible protein D - none -
fig|6666666.229938.peg.395 CDS AP013044.1 466115 466708 2 + 594 ThiJ/PfpI family - none -
fig|6666666.229938.peg.396 CDS AP013044.1 466949 467143 2 + 195 hypothetical protein - none -
fig|6666666.229938.peg.397 CDS AP013044.1 467724 468572 3 + 849 transcriptional regulator, AraC family - none -
fig|6666666.229938.peg.398 CDS AP013044.1 468705 470021 3 + 1317 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229938.peg.399 CDS AP013044.1 470045 470638 2 + 594 tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.229938.peg.400 CDS AP013044.1 470864 470724 -2 - 141 hypothetical protein clusted with conjugative transposons, BF0131 - none -
fig|6666666.229938.peg.401 CDS AP013044.1 471083 470907 -2 - 177 hypothetical protein clusted with conjugative transposons, BF0131 - none -
fig|6666666.229938.peg.402 CDS AP013044.1 472866 472072 -3 - 795 hypothetical protein - none -
fig|6666666.229938.peg.403 CDS AP013044.1 473482 473129 -1 - 354 hypothetical protein - none -
fig|6666666.229938.peg.404 CDS AP013044.1 473769 473635 -3 - 135 hypothetical protein - none -
fig|6666666.229938.peg.405 CDS AP013044.1 475729 475460 -1 - 270 hypothetical protein - none -
fig|6666666.229938.peg.406 CDS AP013044.1 477586 475733 -1 - 1854 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229938.peg.407 CDS AP013044.1 478716 477583 -3 - 1134 FIG074102: hypothetical protein - none -
fig|6666666.229938.peg.408 CDS AP013044.1 481159 478730 -1 - 2430 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229938.peg.409 CDS AP013044.1 484483 481181 -1 - 3303 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229938.peg.410 CDS AP013044.1 485153 484467 -2 - 687 Putative predicted metal-dependent hydrolase Restriction-Modification System
fig|6666666.229938.peg.411 CDS AP013044.1 485827 485699 -1 - 129 FIG00936644: hypothetical protein - none -
fig|6666666.229938.peg.412 CDS AP013044.1 486158 487327 2 + 1170 hypothetical protein - none -
fig|6666666.229938.peg.413 CDS AP013044.1 490226 487911 -2 - 2316 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) - none -
fig|6666666.229938.peg.414 CDS AP013044.1 495817 490223 -1 - 5595 FIG00908368: hypothetical protein - none -
fig|6666666.229938.peg.415 CDS AP013044.1 496163 496801 2 + 639 Orotate phosphoribosyltransferase (EC 2.4.2.10) De Novo Pyrimidine Synthesis
fig|6666666.229938.peg.416 CDS AP013044.1 496880 497254 2 + 375 hypothetical protein - none -
fig|6666666.229938.peg.417 CDS AP013044.1 497260 498597 1 + 1338 Argininosuccinate lyase (EC 4.3.2.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.229938.peg.418 CDS AP013044.1 498594 499061 3 + 468 hypothetical protein - none -
fig|6666666.229938.peg.419 CDS AP013044.1 499400 500365 2 + 966 mannosyltransferase - none -
fig|6666666.229938.peg.420 CDS AP013044.1 501004 500369 -1 - 636 Ribonuclease HI-related protein 3 Ribonuclease H
fig|6666666.229938.peg.421 CDS AP013044.1 501239 502360 2 + 1122 Thiol:disulfide interchange protein - none -
fig|6666666.229938.peg.422 CDS AP013044.1 502388 502897 2 + 510 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) Cobalamin synthesis
fig|6666666.229938.peg.423 CDS AP013044.1 504361 503069 -1 - 1293 Tyrosyl-tRNA synthetase (EC 6.1.1.1) tRNA aminoacylation, Tyr
fig|6666666.229938.peg.424 CDS AP013044.1 504533 505735 2 + 1203 putative DNA methylase - none -
fig|6666666.229938.peg.425 CDS AP013044.1 507420 506107 -3 - 1314 GTP-binding protein EngA Universal GTPases
fig|6666666.229938.peg.426 CDS AP013044.1 508389 507496 -3 - 894 GTP-binding protein Era Bacterial Cell Division;
Glycyl-tRNA synthetase containing cluster;
Universal GTPases
fig|6666666.229938.peg.427 CDS AP013044.1 509374 508370 -1 - 1005 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) - none -
fig|6666666.229938.peg.428 CDS AP013044.1 509581 509462 -1 - 120 LSU ribosomal protein L32p Ribosome LSU bacterial
fig|6666666.229938.peg.429 CDS AP013044.1 510253 509669 -1 - 585 COG1399 protein in cluster with ribosomal protein L32p, Bacteroidetes/Chlorobi subfamily - none -
fig|6666666.229938.peg.430 CDS AP013044.1 512783 510408 -2 - 2376 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.229938.peg.431 CDS AP013044.1 514251 512770 -3 - 1482 Polygalacturonase (EC 3.2.1.15) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229938.peg.432 CDS AP013044.1 517151 514272 -2 - 2880 glycoside hydrolase family 2, sugar binding - none -
fig|6666666.229938.peg.433 CDS AP013044.1 520553 517185 -2 - 3369 Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55) - none -
fig|6666666.229938.peg.434 CDS AP013044.1 522360 520747 -3 - 1614 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.435 CDS AP013044.1 526166 522381 -2 - 3786 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.229938.peg.436 CDS AP013044.1 527351 526320 -2 - 1032 putative anti-sigma factor - none -
fig|6666666.229938.peg.437 CDS AP013044.1 529510 527513 -1 - 1998 Acylamino-acid-releasing enzyme (EC 3.4.19.1) Omega peptidases (EC 3.4.19.-)
fig|6666666.229938.peg.438 CDS AP013044.1 531016 529526 -1 - 1491 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.439 CDS AP013044.1 534355 531044 -1 - 3312 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.440 CDS AP013044.1 534379 534504 1 + 126 hypothetical protein - none -
fig|6666666.229938.peg.441 CDS AP013044.1 534813 536282 3 + 1470 hypothetical protein - none -
fig|6666666.229938.peg.442 CDS AP013044.1 536469 537425 3 + 957 hypothetical protein - none -
fig|6666666.229938.peg.443 CDS AP013044.1 538083 537814 -3 - 270 hypothetical protein - none -
fig|6666666.229938.peg.444 CDS AP013044.1 538104 538280 3 + 177 hypothetical protein - none -
fig|6666666.229938.peg.445 CDS AP013044.1 538446 539057 3 + 612 Peroxiredoxin - none -
fig|6666666.229938.peg.446 CDS AP013044.1 539077 539355 1 + 279 hypothetical protein - none -
fig|6666666.229938.peg.447 CDS AP013044.1 539560 540216 1 + 657 Transaldolase (EC 2.2.1.2) Pentose phosphate pathway
fig|6666666.229938.peg.448 CDS AP013044.1 540321 540929 3 + 609 GTP-binding protein EngB Universal GTPases
fig|6666666.229938.peg.449 CDS AP013044.1 540942 541652 3 + 711 hypothetical protein - none -
fig|6666666.229938.peg.450 CDS AP013044.1 541839 541642 -3 - 198 hypothetical protein - none -
fig|6666666.229938.peg.451 CDS AP013044.1 541843 542352 1 + 510 hypothetical protein - none -
fig|6666666.229938.peg.452 CDS AP013044.1 542369 543361 2 + 993 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) tRNA aminoacylation, Trp
fig|6666666.229938.peg.453 CDS AP013044.1 543429 543866 3 + 438 hypothetical protein - none -
fig|6666666.229938.peg.454 CDS AP013044.1 544024 544389 1 + 366 hypothetical protein - none -
fig|6666666.229938.peg.455 CDS AP013044.1 545692 544694 -1 - 999 Malate dehydrogenase (EC 1.1.1.37) - none -
fig|6666666.229938.peg.456 CDS AP013044.1 545777 545920 2 + 144 hypothetical protein - none -
fig|6666666.229938.peg.457 CDS AP013044.1 546019 547947 1 + 1929 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Pyridoxin (Vitamin B6) Biosynthesis;
Thiamin biosynthesis
fig|6666666.229938.peg.458 CDS AP013044.1 547944 549284 3 + 1341 Trk system potassium uptake protein TrkA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis
fig|6666666.229938.peg.459 CDS AP013044.1 549291 550748 3 + 1458 Potassium uptake protein TrkH Hyperosmotic potassium uptake;
Potassium homeostasis;
Potassium homeostasis;
Transport system clustering with HemG
fig|6666666.229938.peg.460 CDS AP013044.1 551380 550892 -1 - 489 FIG00412494: hypothetical protein - none -
fig|6666666.229938.peg.461 CDS AP013044.1 553539 551377 -3 - 2163 Zinc-regulated outer membrane receptor - none -
fig|6666666.229938.peg.462 CDS AP013044.1 554639 554313 -2 - 327 hypothetical protein - none -
fig|6666666.229938.peg.463 CDS AP013044.1 554947 555465 1 + 519 ErfK/YbiS/YcfS/YnhG family protein - none -
fig|6666666.229938.peg.464 CDS AP013044.1 555599 555730 2 + 132 hypothetical protein - none -
fig|6666666.229938.peg.465 CDS AP013044.1 555947 557320 2 + 1374 archaeal ATPase, fused to C-terminal DUF234 domain - none -
fig|6666666.229938.peg.466 CDS AP013044.1 558835 558302 -1 - 534 Mobile element protein - none -
fig|6666666.229938.peg.467 CDS AP013044.1 559401 558943 -3 - 459 Mobile element protein - none -
fig|6666666.229938.peg.468 CDS AP013044.1 559662 559787 3 + 126 hypothetical protein - none -
fig|6666666.229938.peg.469 CDS AP013044.1 560425 560550 1 + 126 transcriptional regulator, putative - none -
fig|6666666.229938.peg.470 CDS AP013044.1 560554 561822 1 + 1269 HIPA PROTEIN - none -
fig|6666666.229938.peg.471 CDS AP013044.1 562066 562260 1 + 195 transcriptional regulator, putative - none -
fig|6666666.229938.peg.472 CDS AP013044.1 562582 563517 1 + 936 HipA protein Persister Cells
fig|6666666.229938.peg.473 CDS AP013044.1 565030 563621 -1 - 1410 GTPase and tRNA-U34 5-formylation enzyme TrmE Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
RNA modification cluster;
Universal GTPases;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229938.peg.474 CDS AP013044.1 565964 565113 -2 - 852 probable lipoprotein YPO2292 - none -
fig|6666666.229938.peg.475 CDS AP013044.1 567994 565961 -1 - 2034 Excinuclease ABC subunit B DNA repair, UvrABC system
fig|6666666.229938.peg.476 CDS AP013044.1 568220 569872 2 + 1653 hypothetical protein - none -
fig|6666666.229938.peg.477 CDS AP013044.1 570679 569993 -1 - 687 Cytoplasmic copper homeostasis protein cutC - none -
fig|6666666.229938.peg.478 CDS AP013044.1 572056 570743 -1 - 1314 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229938.peg.479 CDS AP013044.1 572219 572073 -2 - 147 hypothetical protein - none -
fig|6666666.229938.peg.480 CDS AP013044.1 572262 573515 3 + 1254 Oligosaccharide repeat unit polymerase Wzy - none -
fig|6666666.229938.peg.481 CDS AP013044.1 573527 574792 2 + 1266 Oligosaccharide repeat unit polymerase Wzy - none -
fig|6666666.229938.peg.482 CDS AP013044.1 574767 575954 3 + 1188 Putative glycosyltransferase protein - none -
fig|6666666.229938.peg.483 CDS AP013044.1 576016 577005 1 + 990 Radical SAM domain heme biosynthesis protein - none -
fig|6666666.229938.peg.484 CDS AP013044.1 577002 578120 3 + 1119 Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.229938.peg.485 CDS AP013044.1 579305 578109 -2 - 1197 hypothetical protein - none -
fig|6666666.229938.peg.486 CDS AP013044.1 580120 579314 -1 - 807 Lipopolysaccharide cholinephosphotransferase LicD1 (EC 2.7.8.-) - none -
fig|6666666.229938.peg.487 CDS AP013044.1 581510 580104 -2 - 1407 Polysaccharide biosynthesis protein CpsM(V) - none -
fig|6666666.229938.peg.488 CDS AP013044.1 582334 581507 -1 - 828 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) - none -
fig|6666666.229938.peg.489 CDS AP013044.1 583947 582346 -3 - 1602 Tyrosine-protein kinase Wzc (EC 2.7.10.2) - none -
fig|6666666.229938.peg.490 CDS AP013044.1 584765 583956 -2 - 810 Polysaccharide export outer membrane protein - none -
fig|6666666.229938.peg.491 CDS AP013044.1 585535 585074 -1 - 462 V-type ATP synthase subunit K (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.229938.peg.492 CDS AP013044.1 587459 585588 -2 - 1872 V-type ATP synthase subunit I (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.229938.peg.493 CDS AP013044.1 588076 587456 -1 - 621 V-type ATP synthase subunit D (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.229938.peg.494 CDS AP013044.1 589433 588108 -2 - 1326 V-type ATP synthase subunit B (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.229938.peg.495 CDS AP013044.1 591197 589440 -2 - 1758 V-type ATP synthase subunit A (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.229938.peg.496 CDS AP013044.1 592070 591201 -2 - 870 V-type ATP synthase subunit C (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.229938.peg.497 CDS AP013044.1 592660 592070 -1 - 591 V-type ATP synthase subunit E (EC 3.6.3.14) V-Type ATP synthase
fig|6666666.229938.peg.498 CDS AP013044.1 592925 596086 2 + 3162 Two-component sensor histidine kinase - none -
fig|6666666.229938.peg.499 CDS AP013044.1 596295 596936 3 + 642 hypothetical protein - none -
fig|6666666.229938.peg.500 CDS AP013044.1 599351 597300 -2 - 2052 Large repetitive protein - none -
fig|6666666.229938.peg.501 CDS AP013044.1 599805 599332 -3 - 474 DNA methylase, putative - none -
fig|6666666.229938.peg.502 CDS AP013044.1 609231 600082 -3 - 9150 hypothetical protein - none -
fig|6666666.229938.peg.503 CDS AP013044.1 611011 609329 -1 - 1683 hypothetical protein - none -
fig|6666666.229938.peg.504 CDS AP013044.1 611466 611588 3 + 123 hypothetical protein - none -
fig|6666666.229938.peg.505 CDS AP013044.1 613340 611829 -2 - 1512 Putative phage protein - none -
fig|6666666.229938.peg.506 CDS AP013044.1 616066 614264 -1 - 1803 Putative phage protein - none -
fig|6666666.229938.peg.507 CDS AP013044.1 616862 616284 -2 - 579 hypothetical protein - none -
fig|6666666.229938.peg.508 CDS AP013044.1 617584 617327 -1 - 258 hypothetical protein - none -
fig|6666666.229938.peg.509 CDS AP013044.1 618606 617605 -3 - 1002 FIG00939856: hypothetical protein - none -
fig|6666666.229938.peg.510 CDS AP013044.1 619976 618648 -2 - 1329 hypothetical protein - none -
fig|6666666.229938.peg.511 CDS AP013044.1 620760 620122 -3 - 639 Putative deoxyribonuclease YjjV Deoxyribose and Deoxynucleoside Catabolism;
YcfH
fig|6666666.229938.peg.512 CDS AP013044.1 621004 620780 -1 - 225 Protein YidD Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229938.peg.513 CDS AP013044.1 621399 620986 -3 - 414 Ribonuclease P protein component (EC 3.1.26.5) Cell Division Subsystem including YidCD;
RNA modification cluster;
tRNA processing
fig|6666666.229938.peg.514 CDS AP013044.1 622162 621386 -1 - 777 uroporphyrinogen-III synthase HemD, putative - none -
fig|6666666.229938.peg.515 CDS AP013044.1 622809 622153 -3 - 657 hypothetical protein - none -
fig|6666666.229938.peg.516 CDS AP013044.1 622828 622962 1 + 135 hypothetical protein - none -
fig|6666666.229938.peg.517 CDS AP013044.1 623004 624572 3 + 1569 L-aspartate oxidase (EC 1.4.3.16) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.229938.peg.518 CDS AP013044.1 624607 625194 1 + 588 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.519 CDS AP013044.1 625266 626264 3 + 999 putative anti-sigma factor - none -
fig|6666666.229938.peg.520 CDS AP013044.1 626385 629780 3 + 3396 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.521 CDS AP013044.1 629799 631511 3 + 1713 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.522 CDS AP013044.1 631596 633311 3 + 1716 probable xanthan lyase - none -
fig|6666666.229938.peg.523 CDS AP013044.1 633369 635081 3 + 1713 Sulfate permease - none -
fig|6666666.229938.peg.524 CDS AP013044.1 635330 636292 2 + 963 Peptide chain release factor 2; programmed frameshift-containing Programmed frameshift;
Programmed frameshift;
Translation termination factors bacterial
fig|6666666.229938.peg.525 CDS AP013044.1 636289 637419 1 + 1131 FIG00898796: hypothetical protein - none -
fig|6666666.229938.peg.526 CDS AP013044.1 637662 637868 3 + 207 IS1478 transposase - none -
fig|6666666.229938.peg.527 CDS AP013044.1 639178 637883 -1 - 1296 HIPA PROTEIN - none -
fig|6666666.229938.peg.528 CDS AP013044.1 641634 640501 -3 - 1134 hypothetical protein - none -
fig|6666666.229938.peg.529 CDS AP013044.1 642711 642016 -3 - 696 hypothetical protein - none -
fig|6666666.229938.peg.530 CDS AP013044.1 642858 643073 3 + 216 hypothetical protein - none -
fig|6666666.229938.peg.531 CDS AP013044.1 643731 643967 3 + 237 hypothetical protein - none -
fig|6666666.229938.peg.532 CDS AP013044.1 643987 644346 1 + 360 hypothetical protein - none -
fig|6666666.229938.peg.533 CDS AP013044.1 644368 644607 1 + 240 hypothetical protein - none -
fig|6666666.229938.peg.534 CDS AP013044.1 644662 645618 1 + 957 hypothetical protein - none -
fig|6666666.229938.peg.535 CDS AP013044.1 645696 646928 3 + 1233 hypothetical protein - none -
fig|6666666.229938.peg.536 CDS AP013044.1 646957 647613 1 + 657 hypothetical protein - none -
fig|6666666.229938.peg.537 CDS AP013044.1 647636 648052 2 + 417 hypothetical protein - none -
fig|6666666.229938.peg.538 CDS AP013044.1 648057 648611 3 + 555 hypothetical protein - none -
fig|6666666.229938.peg.539 CDS AP013044.1 648617 650314 2 + 1698 helicase domain protein - none -
fig|6666666.229938.peg.540 CDS AP013044.1 650311 650559 1 + 249 hypothetical protein - none -
fig|6666666.229938.peg.541 CDS AP013044.1 650681 650541 -2 - 141 hypothetical protein - none -
fig|6666666.229938.peg.542 CDS AP013044.1 650925 651236 3 + 312 hypothetical protein - none -
fig|6666666.229938.peg.543 CDS AP013044.1 651363 651527 3 + 165 hypothetical protein - none -
fig|6666666.229938.peg.544 CDS AP013044.1 652632 652051 -3 - 582 secretion activator protein, putative - none -
fig|6666666.229938.peg.545 CDS AP013044.1 653107 652640 -1 - 468 hypothetical protein - none -
fig|6666666.229938.peg.546 CDS AP013044.1 653942 653115 -2 - 828 hypothetical protein - none -
fig|6666666.229938.peg.547 CDS AP013044.1 654231 653947 -3 - 285 hypothetical protein - none -
fig|6666666.229938.peg.548 CDS AP013044.1 657382 654251 -1 - 3132 Phage-related protein - none -
fig|6666666.229938.peg.549 CDS AP013044.1 657816 657385 -3 - 432 hypothetical protein - none -
fig|6666666.229938.peg.550 CDS AP013044.1 658369 657965 -1 - 405 hypothetical protein - none -
fig|6666666.229938.peg.551 CDS AP013044.1 658903 658499 -1 - 405 hypothetical protein - none -
fig|6666666.229938.peg.552 CDS AP013044.1 659578 659321 -1 - 258 hypothetical protein - none -
fig|6666666.229938.peg.553 CDS AP013044.1 660306 659575 -3 - 732 putative antirepressor protein - none -
fig|6666666.229938.peg.554 CDS AP013044.1 660704 660910 2 + 207 hypothetical protein - none -
fig|6666666.229938.peg.555 CDS AP013044.1 660913 661320 1 + 408 hypothetical protein - none -
fig|6666666.229938.peg.556 CDS AP013044.1 662258 662395 2 + 138 hypothetical protein - none -
fig|6666666.229938.peg.557 CDS AP013044.1 663363 662545 -3 - 819 hypothetical protein - none -
fig|6666666.229938.peg.558 CDS AP013044.1 667131 663421 -3 - 3711 Tail length tape measure protein - none -
fig|6666666.229938.peg.559 CDS AP013044.1 667192 668178 1 + 987 hypothetical protein - none -
fig|6666666.229938.peg.560 CDS AP013044.1 668723 668274 -2 - 450 hypothetical protein - none -
fig|6666666.229938.peg.561 CDS AP013044.1 669179 668766 -2 - 414 hypothetical protein - none -
fig|6666666.229938.peg.562 CDS AP013044.1 669613 669176 -1 - 438 hypothetical protein - none -
fig|6666666.229938.peg.563 CDS AP013044.1 669774 669628 -3 - 147 hypothetical protein - none -
fig|6666666.229938.peg.564 CDS AP013044.1 670279 669965 -1 - 315 hypothetical protein - none -
fig|6666666.229938.peg.565 CDS AP013044.1 671436 670345 -3 - 1092 hypothetical protein - none -
fig|6666666.229938.peg.566 CDS AP013044.1 672032 671472 -2 - 561 hypothetical protein - none -
fig|6666666.229938.peg.567 CDS AP013044.1 672761 672051 -2 - 711 hypothetical protein - none -
fig|6666666.229938.peg.568 CDS AP013044.1 673173 673949 3 + 777 hydrolase, putative - none -
fig|6666666.229938.peg.569 CDS AP013044.1 673946 674281 2 + 336 hypothetical protein - none -
fig|6666666.229938.peg.570 CDS AP013044.1 676844 674274 -2 - 2571 Unknown - none -
fig|6666666.229938.peg.571 CDS AP013044.1 677755 676886 -1 - 870 Portal protein, phage associated - none -
fig|6666666.229938.peg.572 CDS AP013044.1 677754 678392 3 + 639 hypothetical protein - none -
fig|6666666.229938.peg.573 CDS AP013044.1 679844 678378 -2 - 1467 Phage terminase, large subunit Phage packaging machinery
fig|6666666.229938.peg.574 CDS AP013044.1 680251 679841 -1 - 411 hypothetical protein - none -
fig|6666666.229938.peg.575 CDS AP013044.1 680694 680467 -3 - 228 hypothetical protein - none -
fig|6666666.229938.peg.576 CDS AP013044.1 681066 680899 -3 - 168 hypothetical protein - none -
fig|6666666.229938.peg.577 CDS AP013044.1 681686 681513 -2 - 174 hypothetical protein - none -
fig|6666666.229938.peg.578 CDS AP013044.1 681910 681692 -1 - 219 hypothetical protein - none -
fig|6666666.229938.peg.579 CDS AP013044.1 683023 682613 -1 - 411 hypothetical protein - none -
fig|6666666.229938.peg.580 CDS AP013044.1 683929 683057 -1 - 873 Phage-related protein - none -
fig|6666666.229938.peg.581 CDS AP013044.1 684197 683937 -2 - 261 hypothetical protein - none -
fig|6666666.229938.peg.582 CDS AP013044.1 685491 684400 -3 - 1092 hypothetical protein - none -
fig|6666666.229938.peg.583 CDS AP013044.1 686016 685495 -3 - 522 hypothetical protein - none -
fig|6666666.229938.peg.584 CDS AP013044.1 687098 686013 -2 - 1086 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229938.peg.585 CDS AP013044.1 688440 687283 -3 - 1158 Tyrosine type site-specific recombinase, probable regulator for PS locus - none -
fig|6666666.229938.peg.586 CDS AP013044.1 688634 688482 -2 - 153 hypothetical protein - none -
fig|6666666.229938.peg.587 CDS AP013044.1 689399 688872 -2 - 528 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229938.peg.588 CDS AP013044.1 690094 689402 -1 - 693 FIG170660: TPR domain protein CBSS-226186.1.peg.4253
fig|6666666.229938.peg.589 CDS AP013044.1 690244 691347 1 + 1104 DNA recombination and repair protein RecF CBSS-226186.1.peg.4253;
Cell Division Subsystem including YidCD;
DNA repair, bacterial RecFOR pathway;
DNA replication cluster 1
fig|6666666.229938.peg.590 CDS AP013044.1 691344 691637 3 + 294 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives DNA replication cluster 1
fig|6666666.229938.peg.591 CDS AP013044.1 692203 691646 -1 - 558 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 5-FCL-like protein;
Folate Biosynthesis;
One-carbon metabolism by tetrahydropterines
fig|6666666.229938.peg.592 CDS AP013044.1 693789 692200 -3 - 1590 Carboxy-terminal processing protease - none -
fig|6666666.229938.peg.593 CDS AP013044.1 694283 693840 -2 - 444 dCMP deaminase (EC 3.5.4.12) - none -
fig|6666666.229938.peg.594 CDS AP013044.1 694969 694364 -1 - 606 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) NAD and NADP cofactor biosynthesis global
fig|6666666.229938.peg.595 CDS AP013044.1 695575 695009 -1 - 567 Guanylate kinase (EC 2.7.4.8) CBSS-323097.3.peg.2594;
Purine conversions
fig|6666666.229938.peg.596 CDS AP013044.1 696447 695575 -3 - 873 Protein YicC CBSS-323097.3.peg.2594
fig|6666666.229938.peg.597 CDS AP013044.1 696569 696444 -2 - 126 hypothetical protein - none -
fig|6666666.229938.peg.598 CDS AP013044.1 696656 696823 2 + 168 hypothetical protein - none -
fig|6666666.229938.peg.599 CDS AP013044.1 700641 700501 -3 - 141 hypothetical protein - none -
fig|6666666.229938.peg.600 CDS AP013044.1 704823 703141 -3 - 1683 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) - none -
fig|6666666.229938.peg.601 CDS AP013044.1 704980 706293 1 + 1314 tRNA-t(6)A37 methylthiotransferase Heat shock dnaK gene cluster extended;
Methylthiotransferases
fig|6666666.229938.peg.602 CDS AP013044.1 706290 707195 3 + 906 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) - none -
fig|6666666.229938.peg.603 CDS AP013044.1 707372 708409 2 + 1038 Glycosyltransferase - none -
fig|6666666.229938.peg.604 CDS AP013044.1 708588 708475 -3 - 114 hypothetical protein - none -
fig|6666666.229938.peg.605 CDS AP013044.1 711022 709889 -1 - 1134 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229938.peg.606 CDS AP013044.1 711364 711035 -1 - 330 Transcriptional regulator, PadR family CBSS-1352.1.peg.856
fig|6666666.229938.peg.607 CDS AP013044.1 711510 712502 3 + 993 Zinc ABC transporter, inner membrane permease protein ZnuB - none -
fig|6666666.229938.peg.608 CDS AP013044.1 712585 712953 1 + 369 hypothetical protein - none -
fig|6666666.229938.peg.609 CDS AP013044.1 712972 713325 1 + 354 hypothetical protein - none -
fig|6666666.229938.peg.610 CDS AP013044.1 713315 714058 2 + 744 Biotin--protein ligase (EC 6.3.4.9, EC 6.3.4.10, EC 6.3.4.11, EC 6.3.4.15) - none -
fig|6666666.229938.peg.611 CDS AP013044.1 714183 717362 3 + 3180 hypothetical protein - none -
fig|6666666.229938.peg.612 CDS AP013044.1 718247 717387 -2 - 861 ATP synthase gamma chain (EC 3.6.3.14) - none -
fig|6666666.229938.peg.613 CDS AP013044.1 719877 718276 -3 - 1602 ATP synthase alpha chain (EC 3.6.3.14) - none -
fig|6666666.229938.peg.614 CDS AP013044.1 720479 719901 -2 - 579 ATP synthase delta chain (EC 3.6.3.14) - none -
fig|6666666.229938.peg.615 CDS AP013044.1 721041 720547 -3 - 495 ATP synthase F0 sector subunit b - none -
fig|6666666.229938.peg.616 CDS AP013044.1 721271 721059 -2 - 213 ATP synthase F0 sector subunit c - none -
fig|6666666.229938.peg.617 CDS AP013044.1 722400 721351 -3 - 1050 ATP synthase F0 sector subunit a - none -
fig|6666666.229938.peg.618 CDS AP013044.1 722863 722423 -1 - 441 hypothetical protein - none -
fig|6666666.229938.peg.619 CDS AP013044.1 723137 722892 -2 - 246 ATP synthase epsilon chain (EC 3.6.3.14) - none -
fig|6666666.229938.peg.620 CDS AP013044.1 724665 723142 -3 - 1524 ATP synthase beta chain (EC 3.6.3.14) - none -
fig|6666666.229938.peg.621 CDS AP013044.1 726226 724928 -1 - 1299 carboxyl-terminal protease-related protein - none -
fig|6666666.229938.peg.622 CDS AP013044.1 727049 726273 -2 - 777 hypothetical protein - none -
fig|6666666.229938.peg.623 CDS AP013044.1 728714 727137 -2 - 1578 Peptide chain release factor 3 Translation termination factors bacterial
fig|6666666.229938.peg.624 CDS AP013044.1 729590 728727 -2 - 864 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229938.peg.625 CDS AP013044.1 730109 729609 -2 - 501 hypothetical protein - none -
fig|6666666.229938.peg.626 CDS AP013044.1 730234 731091 1 + 858 Beta-lactamase-like - none -
fig|6666666.229938.peg.627 CDS AP013044.1 734075 731217 -2 - 2859 ZINC PROTEASE (EC 3.4.99.-) - none -
fig|6666666.229938.peg.628 CDS AP013044.1 734126 734260 2 + 135 hypothetical protein - none -
fig|6666666.229938.peg.629 CDS AP013044.1 735812 734241 -2 - 1572 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) - none -
fig|6666666.229938.peg.630 CDS AP013044.1 737200 735809 -1 - 1392 putative periplasmic protein - none -
fig|6666666.229938.peg.631 CDS AP013044.1 738593 737175 -2 - 1419 FIG00898563: hypothetical protein - none -
fig|6666666.229938.peg.632 CDS AP013044.1 738892 740361 1 + 1470 FIG00937589: hypothetical protein - none -
fig|6666666.229938.peg.633 CDS AP013044.1 740561 742468 2 + 1908 Chaperone protein DnaK GroEL GroES;
Heat shock dnaK gene cluster extended;
Protein chaperones
fig|6666666.229938.peg.634 CDS AP013044.1 742973 743233 2 + 261 putative transposase - none -
fig|6666666.229938.peg.635 CDS AP013044.1 743474 743803 2 + 330 phage integrase family protein - none -
fig|6666666.229938.peg.636 CDS AP013044.1 744388 744507 1 + 120 hypothetical protein - none -
fig|6666666.229938.peg.637 CDS AP013044.1 744527 745228 2 + 702 Mobilizable transposon, tnpC protein - none -
fig|6666666.229938.peg.638 CDS AP013044.1 746106 745294 -3 - 813 hypothetical protein - none -
fig|6666666.229938.peg.639 CDS AP013044.1 746445 746801 3 + 357 excisionase - none -
fig|6666666.229938.peg.640 CDS AP013044.1 746816 748021 2 + 1206 FIG00939579: hypothetical protein - none -
fig|6666666.229938.peg.641 CDS AP013044.1 748568 749137 2 + 570 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229938.peg.642 CDS AP013044.1 749267 749629 2 + 363 mobilization protein - none -
fig|6666666.229938.peg.643 CDS AP013044.1 749619 750560 3 + 942 Mobilization protein BmgA - none -
fig|6666666.229938.peg.644 CDS AP013044.1 750601 751290 1 + 690 hypothetical protein - none -
fig|6666666.229938.peg.645 CDS AP013044.1 751408 751623 1 + 216 transcriptional regulator, putative - none -
fig|6666666.229938.peg.646 CDS AP013044.1 751693 752907 1 + 1215 FIG036446: hypothetical protein Rad50-Mre11 DNA repair cluster
fig|6666666.229938.peg.647 CDS AP013044.1 752897 754774 2 + 1878 Bipolar DNA helicase HerA Rad50-Mre11 DNA repair cluster
fig|6666666.229938.peg.648 CDS AP013044.1 755059 756105 1 + 1047 hypothetical protein - none -
fig|6666666.229938.peg.649 CDS AP013044.1 756164 757510 2 + 1347 Transcriptional regulator, ArsR family - none -
fig|6666666.229938.peg.650 CDS AP013044.1 757625 758080 2 + 456 acetyltransferase, GNAT family - none -
fig|6666666.229938.peg.651 CDS AP013044.1 758134 758955 1 + 822 ATP-dependent DNA helicase - none -
fig|6666666.229938.peg.652 CDS AP013044.1 759027 759590 3 + 564 ATP-dependent DNA helicase - none -
fig|6666666.229938.peg.653 CDS AP013044.1 759945 760106 3 + 162 FIG00936042: hypothetical protein - none -
fig|6666666.229938.peg.654 CDS AP013044.1 760622 760807 2 + 186 Filamentation induced by cAMP protein Fic - none -
fig|6666666.229938.peg.655 CDS AP013044.1 760946 761221 2 + 276 Filamentation induced by cAMP protein Fic - none -
fig|6666666.229938.peg.656 CDS AP013044.1 761242 763569 1 + 2328 Beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.229938.peg.657 CDS AP013044.1 763584 764621 3 + 1038 hypothetical protein - none -
fig|6666666.229938.peg.658 CDS AP013044.1 764747 764613 -2 - 135 hypothetical protein - none -
fig|6666666.229938.peg.659 CDS AP013044.1 765236 765658 2 + 423 Mobile element protein - none -
fig|6666666.229938.peg.660 CDS AP013044.1 765767 766330 2 + 564 Mobile element protein - none -
fig|6666666.229938.peg.661 CDS AP013044.1 766540 766836 1 + 297 hypothetical protein - none -
fig|6666666.229938.peg.662 CDS AP013044.1 766877 768898 2 + 2022 Zinc metalloproteinase precursor (EC 3.4.24.29) / aureolysin Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.229938.peg.663 CDS AP013044.1 769600 772185 1 + 2586 DNA mismatch repair protein MutS DNA repair, bacterial MutL-MutS system;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229938.peg.664 CDS AP013044.1 772185 773168 3 + 984 Gluconolactonase (EC 3.1.1.17) Entner-Doudoroff Pathway
fig|6666666.229938.peg.665 CDS AP013044.1 773158 774756 1 + 1599 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229938.peg.666 CDS AP013044.1 774753 775355 3 + 603 3@1-to-5@1 exoribonuclease RNase R RNA processing and degradation, bacterial
fig|6666666.229938.peg.667 CDS AP013044.1 776030 775437 -2 - 594 hypothetical protein - none -
fig|6666666.229938.peg.668 CDS AP013044.1 777703 776132 -1 - 1572 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Phosphoglycerate mutase protein family
fig|6666666.229938.peg.669 CDS AP013044.1 780122 777768 -2 - 2355 hypothetical protein - none -
fig|6666666.229938.peg.670 CDS AP013044.1 780205 780086 -1 - 120 hypothetical protein - none -
fig|6666666.229938.peg.671 CDS AP013044.1 782353 780254 -1 - 2100 Alfa-L-rhamnosidase (EC 3.2.1.40) - none -
fig|6666666.229938.peg.672 CDS AP013044.1 782885 782337 -2 - 549 Alfa-L-rhamnosidase (EC 3.2.1.40) - none -
fig|6666666.229938.peg.673 CDS AP013044.1 783555 783049 -3 - 507 Nitroreductase family protein - none -
fig|6666666.229938.peg.674 CDS AP013044.1 783845 783967 2 + 123 hypothetical protein - none -
fig|6666666.229938.peg.675 CDS AP013044.1 784300 785031 1 + 732 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) Bacterial Cell Division
fig|6666666.229938.peg.676 CDS AP013044.1 785073 786404 3 + 1332 Aspartokinase (EC 2.7.2.4) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229938.peg.677 CDS AP013044.1 786433 787593 1 + 1161 Diaminopimelate decarboxylase (EC 4.1.1.20) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229938.peg.678 CDS AP013044.1 788288 787818 -2 - 471 FIG00897164: hypothetical protein - none -
fig|6666666.229938.peg.679 CDS AP013044.1 791844 788359 -3 - 3486 FIG00896849: hypothetical protein - none -
fig|6666666.229938.peg.680 CDS AP013044.1 793186 791930 -1 - 1257 probable NADH-dependent dehydrogenase - none -
fig|6666666.229938.peg.681 CDS AP013044.1 793641 797036 3 + 3396 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.682 CDS AP013044.1 797060 798676 2 + 1617 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.229938.peg.683 CDS AP013044.1 798790 800334 1 + 1545 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.229938.peg.684 CDS AP013044.1 800949 800449 -3 - 501 hypothetical protein - none -
fig|6666666.229938.peg.685 CDS AP013044.1 804422 801108 -2 - 3315 hemolysin-type calcium-binding region protein - none -
fig|6666666.229938.peg.686 CDS AP013044.1 808415 804933 -2 - 3483 FIG00936378: hypothetical protein - none -
fig|6666666.229938.peg.687 CDS AP013044.1 809636 808512 -2 - 1125 FIG00937152: hypothetical protein - none -
fig|6666666.229938.peg.688 CDS AP013044.1 810945 809626 -3 - 1320 Phenylacetate-coenzyme A ligase (EC 6.2.1.30); Coenzyme F390 synthetase Aromatic amino acid interconversions with aryl acids
fig|6666666.229938.peg.689 CDS AP013044.1 811329 810958 -3 - 372 hypothetical protein - none -
fig|6666666.229938.peg.690 CDS AP013044.1 812880 811333 -3 - 1548 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.229938.peg.691 CDS AP013044.1 815393 814677 -2 - 717 hypothetical protein - none -
fig|6666666.229938.peg.692 CDS AP013044.1 817490 815499 -2 - 1992 TonB-dependent receptor, putative - none -
fig|6666666.229938.peg.693 CDS AP013044.1 818293 817529 -1 - 765 hypothetical protein - none -
fig|6666666.229938.peg.694 CDS AP013044.1 819479 818664 -2 - 816 hypothetical protein - none -
fig|6666666.229938.peg.695 CDS AP013044.1 819898 819659 -1 - 240 putative transposase_11 DDE family protein - none -
fig|6666666.229938.peg.696 CDS AP013044.1 819996 822722 3 + 2727 Topoisomerase IV subunit A (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229938.peg.697 CDS AP013044.1 822743 823576 2 + 834 FIG00415187: hypothetical protein - none -
fig|6666666.229938.peg.698 CDS AP013044.1 823580 824596 2 + 1017 Carboxyl-terminal protease-related protein - none -
fig|6666666.229938.peg.699 CDS AP013044.1 824852 825649 2 + 798 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229938.peg.700 CDS AP013044.1 825653 826555 2 + 903 Chromosome (plasmid) partitioning protein ParB Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229938.peg.701 CDS AP013044.1 826597 827274 1 + 678 FIG00937393: hypothetical protein - none -
fig|6666666.229938.peg.702 CDS AP013044.1 827279 828874 2 + 1596 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229938.peg.703 CDS AP013044.1 828888 831143 3 + 2256 GTP pyrophosphokinase (EC 2.7.6.5) / Guanosine-3@1,5@1-bis(diphosphate) 3@1-pyrophosphohydrolase (EC 3.1.7.2) Stringent Response, (p)ppGpp metabolism
fig|6666666.229938.peg.704 CDS AP013044.1 831760 831635 -1 - 126 hypothetical protein - none -
fig|6666666.229938.peg.705 CDS AP013044.1 831973 831845 -1 - 129 hypothetical protein - none -
fig|6666666.229938.peg.706 CDS AP013044.1 833044 832046 -1 - 999 Sodium-calcium exchanger - none -
fig|6666666.229938.peg.707 CDS AP013044.1 833411 833049 -2 - 363 Transcriptional regulator - none -
fig|6666666.229938.peg.708 CDS AP013044.1 834402 833419 -3 - 984 Peptidase, family M23 (EC 3.4.24.-) CBSS-226186.1.peg.3994
fig|6666666.229938.peg.709 CDS AP013044.1 834501 837131 3 + 2631 Alanyl-tRNA synthetase (EC 6.1.1.7) CBSS-226186.1.peg.3994;
Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229938.peg.710 CDS AP013044.1 837135 838190 3 + 1056 3-dehydroquinate synthase (EC 4.2.3.4) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229938.peg.711 CDS AP013044.1 839045 838656 -2 - 390 hypothetical protein - none -
fig|6666666.229938.peg.712 CDS AP013044.1 840579 839143 -3 - 1437 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.229938.peg.713 CDS AP013044.1 840856 842262 1 + 1407 oxidoreductase, Gfo/Idh/MocA family - none -
fig|6666666.229938.peg.714 CDS AP013044.1 842381 844369 2 + 1989 Urocanate hydratase (EC 4.2.1.49) Histidine Degradation
fig|6666666.229938.peg.715 CDS AP013044.1 844428 845384 3 + 957 hypothetical protein - none -
fig|6666666.229938.peg.716 CDS AP013044.1 845433 845738 3 + 306 hypothetical protein - none -
fig|6666666.229938.peg.717 CDS AP013044.1 845768 848692 2 + 2925 hypothetical protein - none -
fig|6666666.229938.peg.718 CDS AP013044.1 848835 849731 3 + 897 Glutamate formiminotransferase (EC 2.1.2.5) @ Glutamate formyltransferase 5-FCL-like protein;
Histidine Degradation
fig|6666666.229938.peg.719 CDS AP013044.1 849790 851028 1 + 1239 Imidazolonepropionase (EC 3.5.2.7) Histidine Degradation
fig|6666666.229938.peg.720 CDS AP013044.1 851237 851467 2 + 231 Conserved protein - none -
fig|6666666.229938.peg.721 CDS AP013044.1 851522 852151 2 + 630 Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229938.peg.722 CDS AP013044.1 852166 853665 1 + 1500 Histidine ammonia-lyase (EC 4.3.1.3) Histidine Degradation
fig|6666666.229938.peg.723 CDS AP013044.1 854048 854899 2 + 852 hypothetical protein - none -
fig|6666666.229938.peg.724 CDS AP013044.1 854958 855089 3 + 132 hypothetical protein - none -
fig|6666666.229938.peg.725 CDS AP013044.1 855248 857713 2 + 2466 putative TonB-dependent receptor - none -
fig|6666666.229938.peg.726 CDS AP013044.1 857890 858798 1 + 909 S1 RNA binding domain - none -
fig|6666666.229938.peg.727 CDS AP013044.1 859845 858895 -3 - 951 hypothetical protein - none -
fig|6666666.229938.peg.728 CDS AP013044.1 859951 860121 1 + 171 hypothetical protein - none -
fig|6666666.229938.peg.729 CDS AP013044.1 860134 860913 1 + 780 COG0671: Membrane-associated phospholipid phosphatase - none -
fig|6666666.229938.peg.730 CDS AP013044.1 860927 862075 2 + 1149 Phosphate-specific outer membrane porin OprP; Pyrophosphate-specific outer membrane porin OprO Phosphate metabolism;
Phosphate metabolism
fig|6666666.229938.peg.731 CDS AP013044.1 862124 863410 2 + 1287 Glucose-1-phosphatase precursor (EC 3.1.3.10) - none -
fig|6666666.229938.peg.732 CDS AP013044.1 864025 863414 -1 - 612 hypothetical protein - none -
fig|6666666.229938.peg.733 CDS AP013044.1 864165 864812 3 + 648 Lipoprotein releasing system ATP-binding protein LolD Lipoprotein sorting system
fig|6666666.229938.peg.734 CDS AP013044.1 864809 866167 2 + 1359 Putative sodium-dependent transporter - none -
fig|6666666.229938.peg.735 CDS AP013044.1 867764 866487 -2 - 1278 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.736 CDS AP013044.1 867879 867739 -3 - 141 hypothetical protein - none -
fig|6666666.229938.peg.737 CDS AP013044.1 867958 868890 1 + 933 Quinolinate synthetase (EC 2.5.1.72) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.229938.peg.738 CDS AP013044.1 868905 871847 3 + 2943 hypothetical protein - none -
fig|6666666.229938.peg.739 CDS AP013044.1 871886 873265 2 + 1380 FIG00899328: hypothetical protein - none -
fig|6666666.229938.peg.740 CDS AP013044.1 873329 874003 2 + 675 hypothetical protein - none -
fig|6666666.229938.peg.741 CDS AP013044.1 874000 874716 1 + 717 hypothetical protein - none -
fig|6666666.229938.peg.742 CDS AP013044.1 875550 874771 -3 - 780 hypothetical protein - none -
fig|6666666.229938.peg.743 CDS AP013044.1 875872 875591 -1 - 282 hypothetical protein - none -
fig|6666666.229938.peg.744 CDS AP013044.1 876433 876299 -1 - 135 hypothetical protein - none -
fig|6666666.229938.peg.745 CDS AP013044.1 876635 877027 2 + 393 4-hydroxybenzoyl-CoA thioesterase family active site Ton and Tol transport systems
fig|6666666.229938.peg.746 CDS AP013044.1 877050 878162 3 + 1113 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229938.peg.747 CDS AP013044.1 878169 879908 3 + 1740 UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide - none -
fig|6666666.229938.peg.748 CDS AP013044.1 880201 880377 1 + 177 hypothetical protein - none -
fig|6666666.229938.peg.749 CDS AP013044.1 880374 881735 3 + 1362 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229938.peg.750 CDS AP013044.1 881869 882894 1 + 1026 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) / Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) Peptide methionine sulfoxide reductase;
Peptide methionine sulfoxide reductase
fig|6666666.229938.peg.751 CDS AP013044.1 883003 884271 1 + 1269 Biotin synthase related domain containing protein - none -
fig|6666666.229938.peg.752 CDS AP013044.1 884282 885043 2 + 762 Domain often clustered or fused with uracil-DNA glycosylase Uracil-DNA glycosylase
fig|6666666.229938.peg.753 CDS AP013044.1 885106 885273 1 + 168 hypothetical protein - none -
fig|6666666.229938.peg.754 CDS AP013044.1 885321 885575 3 + 255 hypothetical protein - none -
fig|6666666.229938.peg.755 CDS AP013044.1 886359 885649 -3 - 711 FIG00896664: hypothetical protein - none -
fig|6666666.229938.peg.756 CDS AP013044.1 891012 886363 -3 - 4650 FIG00898163: hypothetical protein - none -
fig|6666666.229938.peg.757 CDS AP013044.1 894131 891045 -2 - 3087 RND multidrug efflux transporter; Acriflavin resistance protein Multidrug Resistance Efflux Pumps
fig|6666666.229938.peg.758 CDS AP013044.1 895250 894183 -2 - 1068 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229938.peg.759 CDS AP013044.1 896753 895281 -2 - 1473 putative outer membrane lipoprotein silC precursor - none -
fig|6666666.229938.peg.760 CDS AP013044.1 900194 896835 -2 - 3360 FIG00898757: hypothetical protein - none -
fig|6666666.229938.peg.761 CDS AP013044.1 901115 900219 -2 - 897 ABC transporter ATP-binding protein - none -
fig|6666666.229938.peg.762 CDS AP013044.1 902231 901260 -2 - 972 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229938.peg.763 CDS AP013044.1 904418 902325 -2 - 2094 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism
fig|6666666.229938.peg.764 CDS AP013044.1 905051 906538 2 + 1488 2-isopropylmalate synthase (EC 2.3.3.13) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.229938.peg.765 CDS AP013044.1 906598 908034 1 + 1437 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.229938.peg.766 CDS AP013044.1 908075 908536 2 + 462 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit - none -
fig|6666666.229938.peg.767 CDS AP013044.1 908542 909135 1 + 594 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.229938.peg.768 CDS AP013044.1 909230 910810 2 + 1581 (R)-citramalate synthase (EC 2.3.1.182) Branched-Chain Amino Acid Biosynthesis
fig|6666666.229938.peg.769 CDS AP013044.1 910871 911944 2 + 1074 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.229938.peg.771 CDS AP013044.1 913029 912241 -3 - 789 hypothetical protein - none -
fig|6666666.229938.peg.772 CDS AP013044.1 913007 913141 2 + 135 hypothetical protein - none -
fig|6666666.229938.peg.773 CDS AP013044.1 915463 913187 -1 - 2277 FIG00898528: hypothetical protein - none -
fig|6666666.229938.peg.774 CDS AP013044.1 915614 916378 2 + 765 tRNA (guanosine(18)-2@1-O)-methyltransferase (EC 2.1.1.34) RNA methylation;
tRNA modification Bacteria
fig|6666666.229938.peg.775 CDS AP013044.1 916822 916947 1 + 126 hypothetical protein - none -
fig|6666666.229938.peg.776 CDS AP013044.1 917025 920489 3 + 3465 Cell surface protein - none -
fig|6666666.229938.peg.777 CDS AP013044.1 920822 921022 2 + 201 hypothetical protein - none -
fig|6666666.229938.peg.778 CDS AP013044.1 921022 921300 1 + 279 YafQ toxin protein - none -
fig|6666666.229938.peg.779 CDS AP013044.1 923912 921618 -2 - 2295 Na(+)/H(+) antiporter - none -
fig|6666666.229938.peg.780 CDS AP013044.1 923994 927683 3 + 3690 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) - none -
fig|6666666.229938.peg.781 CDS AP013044.1 929545 927719 -1 - 1827 Putative collagenase - none -
fig|6666666.229938.peg.782 CDS AP013044.1 930493 929546 -1 - 948 Homoserine O-succinyltransferase (EC 2.3.1.46) - none -
fig|6666666.229938.peg.783 CDS AP013044.1 931807 930545 -1 - 1263 Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type S NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229938.peg.784 CDS AP013044.1 932856 931828 -3 - 1029 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Macromolecular synthesis operon;
YgjD and YeaZ
fig|6666666.229938.peg.785 CDS AP013044.1 933048 937418 3 + 4371 FIG00898933: hypothetical protein - none -
fig|6666666.229938.peg.786 CDS AP013044.1 938167 937442 -1 - 726 hypothetical protein - none -
fig|6666666.229938.peg.787 CDS AP013044.1 938738 938172 -2 - 567 Flavoredoxin - none -
fig|6666666.229938.peg.788 CDS AP013044.1 939254 938787 -2 - 468 Aspartate carbamoyltransferase regulatory chain (PyrI) De Novo Pyrimidine Synthesis
fig|6666666.229938.peg.789 CDS AP013044.1 940199 939267 -2 - 933 Aspartate carbamoyltransferase (EC 2.1.3.2) De Novo Pyrimidine Synthesis
fig|6666666.229938.peg.790 CDS AP013044.1 941032 940193 -1 - 840 hypothetical protein - none -
fig|6666666.229938.peg.791 CDS AP013044.1 941102 941221 2 + 120 hypothetical protein - none -
fig|6666666.229938.peg.792 CDS AP013044.1 941236 942603 1 + 1368 hypothetical protein - none -
fig|6666666.229938.peg.793 CDS AP013044.1 942648 944192 3 + 1545 putative auxin-regulated protein - none -
fig|6666666.229938.peg.794 CDS AP013044.1 944648 944226 -2 - 423 hypothetical protein - none -
fig|6666666.229938.peg.795 CDS AP013044.1 944868 945410 3 + 543 RNA polymerase sigma factor SigW Transcription initiation, bacterial sigma factors
fig|6666666.229938.peg.796 CDS AP013044.1 945407 945976 2 + 570 hypothetical protein - none -
fig|6666666.229938.peg.797 CDS AP013044.1 945973 946944 1 + 972 hypothetical protein - none -
fig|6666666.229938.peg.798 CDS AP013044.1 948064 947165 -1 - 900 hypothetical protein - none -
fig|6666666.229938.peg.799 CDS AP013044.1 948485 948141 -2 - 345 hypothetical protein - none -
fig|6666666.229938.peg.800 CDS AP013044.1 950500 948731 -1 - 1770 hypothetical protein - none -
fig|6666666.229938.peg.801 CDS AP013044.1 951008 950511 -2 - 498 hypothetical protein - none -
fig|6666666.229938.peg.802 CDS AP013044.1 951621 951136 -3 - 486 hypothetical protein - none -
fig|6666666.229938.peg.803 CDS AP013044.1 952626 951631 -3 - 996 Phage tail fibers Phage tail fiber proteins
fig|6666666.229938.peg.804 CDS AP013044.1 953035 955806 1 + 2772 probable acylaminoacyl-peptidase - none -
fig|6666666.229938.peg.805 CDS AP013044.1 955891 956469 1 + 579 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.806 CDS AP013044.1 956543 957514 2 + 972 putative anti-sigma factor - none -
fig|6666666.229938.peg.807 CDS AP013044.1 957521 957655 2 + 135 hypothetical protein - none -
fig|6666666.229938.peg.808 CDS AP013044.1 959940 957640 -3 - 2301 hypothetical protein - none -
fig|6666666.229938.peg.809 CDS AP013044.1 961124 960240 -2 - 885 hypothetical protein - none -
fig|6666666.229938.peg.810 CDS AP013044.1 961323 961165 -3 - 159 hypothetical protein - none -
fig|6666666.229938.peg.811 CDS AP013044.1 961444 962754 1 + 1311 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.229938.peg.812 CDS AP013044.1 962751 963434 3 + 684 Transcriptional regulatory protein rprY - none -
fig|6666666.229938.peg.813 CDS AP013044.1 964508 964654 2 + 147 hypothetical protein - none -
fig|6666666.229938.peg.814 CDS AP013044.1 964732 965346 1 + 615 FIG00939976: hypothetical protein - none -
fig|6666666.229938.peg.815 CDS AP013044.1 965356 966417 1 + 1062 ADP-heptose:LPS heptosyltransferase II - none -
fig|6666666.229938.peg.816 CDS AP013044.1 966996 966409 -3 - 588 Alpha-ribazole-5@1-phosphate phosphatase (EC 3.1.3.73) Cobalamin synthesis;
Phosphoglycerate mutase protein family
fig|6666666.229938.peg.817 CDS AP013044.1 967772 966981 -2 - 792 Cobalamin synthase - none -
fig|6666666.229938.peg.818 CDS AP013044.1 968815 967775 -1 - 1041 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Cobalamin synthesis
fig|6666666.229938.peg.819 CDS AP013044.1 969630 968917 -3 - 714 hypothetical protein - none -
fig|6666666.229938.peg.820 CDS AP013044.1 969747 970340 3 + 594 Transcriptional regulator, TetR family - none -
fig|6666666.229938.peg.821 CDS AP013044.1 970337 971356 2 + 1020 Bll2647 protein - none -
fig|6666666.229938.peg.822 CDS AP013044.1 971497 972189 1 + 693 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.229938.peg.823 CDS AP013044.1 973602 972304 -3 - 1299 ATPase component BioM of energizing module of biotin ECF transporter - none -
fig|6666666.229938.peg.824 CDS AP013044.1 973802 973638 -2 - 165 hypothetical protein - none -
fig|6666666.229938.peg.825 CDS AP013044.1 973774 973944 1 + 171 hypothetical protein - none -
fig|6666666.229938.peg.826 CDS AP013044.1 975748 974096 -1 - 1653 hypothetical protein - none -
fig|6666666.229938.peg.827 CDS AP013044.1 975935 975792 -2 - 144 hypothetical protein - none -
fig|6666666.229938.peg.828 CDS AP013044.1 976626 976033 -3 - 594 Phosphoserine phosphatase (EC 3.1.3.3) Glycine and Serine Utilization;
Serine Biosynthesis;
Serine Biosynthesis
fig|6666666.229938.peg.829 CDS AP013044.1 977524 976631 -1 - 894 FIG00937610: hypothetical protein - none -
fig|6666666.229938.peg.830 CDS AP013044.1 978084 978215 3 + 132 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.229938.peg.831 CDS AP013044.1 978345 978187 -3 - 159 hypothetical protein - none -
fig|6666666.229938.peg.832 CDS AP013044.1 978362 978799 2 + 438 hypothetical protein - none -
fig|6666666.229938.peg.833 CDS AP013044.1 978848 979300 2 + 453 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.834 CDS AP013044.1 979304 979822 2 + 519 hypothetical protein - none -
fig|6666666.229938.peg.835 CDS AP013044.1 979824 980312 3 + 489 hypothetical protein - none -
fig|6666666.229938.peg.836 CDS AP013044.1 980357 981901 2 + 1545 Response regulator - none -
fig|6666666.229938.peg.837 CDS AP013044.1 981898 982320 1 + 423 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA YjeE
fig|6666666.229938.peg.838 CDS AP013044.1 983447 982314 -2 - 1134 Pleiotropic regulatory protein - none -
fig|6666666.229938.peg.839 CDS AP013044.1 985579 983447 -1 - 2133 Methionyl-tRNA synthetase (EC 6.1.1.10) tRNA aminoacylation, Met
fig|6666666.229938.peg.840 CDS AP013044.1 987575 985773 -2 - 1803 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) - none -
fig|6666666.229938.peg.841 CDS AP013044.1 987539 987706 2 + 168 hypothetical protein - none -
fig|6666666.229938.peg.842 CDS AP013044.1 988055 988174 2 + 120 hypothetical protein - none -
fig|6666666.229938.peg.843 CDS AP013044.1 989285 988251 -2 - 1035 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229938.peg.844 CDS AP013044.1 990041 989928 -2 - 114 hypothetical protein - none -
fig|6666666.229938.peg.845 CDS AP013044.1 990616 990074 -1 - 543 hypothetical protein - none -
fig|6666666.229938.peg.846 CDS AP013044.1 992419 990728 -1 - 1692 Immunoreactive 53 kDa antigen PG123 - none -
fig|6666666.229938.peg.847 CDS AP013044.1 992652 993884 3 + 1233 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229938.peg.848 CDS AP013044.1 993907 994347 1 + 441 hypothetical protein - none -
fig|6666666.229938.peg.849 CDS AP013044.1 994574 996166 2 + 1593 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229938.peg.850 CDS AP013044.1 997007 996291 -2 - 717 probable DNA alkylation repair enzyme - none -
fig|6666666.229938.peg.851 CDS AP013044.1 997975 997004 -1 - 972 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81) Glycolate, glyoxylate interconversions;
Glycolate, glyoxylate interconversions;
Glycolate, glyoxylate interconversions
fig|6666666.229938.peg.852 CDS AP013044.1 998067 999302 3 + 1236 Fused spore maturation proteins A and B Spore Core Dehydration
fig|6666666.229938.peg.853 CDS AP013044.1 999329 999724 2 + 396 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229938.peg.854 CDS AP013044.1 1000469 999717 -2 - 753 hypothetical protein - none -
fig|6666666.229938.peg.855 CDS AP013044.1 1000772 1003609 2 + 2838 Leucyl-tRNA synthetase (EC 6.1.1.4) tRNA aminoacylation, Leu
fig|6666666.229938.peg.856 CDS AP013044.1 1003606 1004481 1 + 876 putative transporter - none -
fig|6666666.229938.peg.857 CDS AP013044.1 1004570 1005148 2 + 579 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) Heat shock dnaK gene cluster extended;
Housecleaning nucleoside triphosphate pyrophosphatases
fig|6666666.229938.peg.858 CDS AP013044.1 1005221 1007530 2 + 2310 Immunoreactive 84kD antigen PG93 - none -
fig|6666666.229938.peg.859 CDS AP013044.1 1008570 1007581 -3 - 990 COG0500: SAM-dependent methyltransferases - none -
fig|6666666.229938.peg.860 CDS AP013044.1 1008824 1010641 2 + 1818 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) - none -
fig|6666666.229938.peg.861 CDS AP013044.1 1010730 1011350 3 + 621 Transporter, LysE family - none -
fig|6666666.229938.peg.862 CDS AP013044.1 1012430 1011564 -2 - 867 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229938.peg.863 CDS AP013044.1 1013123 1012434 -2 - 690 Cytidylate kinase (EC 2.7.4.25) - none -
fig|6666666.229938.peg.864 CDS AP013044.1 1014204 1013152 -3 - 1053 low affinity penicillin binding protein - none -
fig|6666666.229938.peg.865 CDS AP013044.1 1014409 1015107 1 + 699 Ferric siderophore transport system, periplasmic binding protein TonB Hemin transport system;
Ton and Tol transport systems
fig|6666666.229938.peg.866 CDS AP013044.1 1015198 1016181 1 + 984 Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229938.peg.867 CDS AP013044.1 1016195 1016998 2 + 804 Putative deoxyribonuclease YcfH YcfH
fig|6666666.229938.peg.868 CDS AP013044.1 1017338 1018081 2 + 744 MotA/TolQ/ExbB proton channel family protein Ton and Tol transport systems
fig|6666666.229938.peg.869 CDS AP013044.1 1018115 1018564 2 + 450 hypothetical protein - none -
fig|6666666.229938.peg.870 CDS AP013044.1 1018585 1019178 1 + 594 Biopolymer transport exbD protein. - none -
fig|6666666.229938.peg.871 CDS AP013044.1 1019194 1019661 1 + 468 FIG00935740: hypothetical protein - none -
fig|6666666.229938.peg.872 CDS AP013044.1 1019815 1020153 1 + 339 Transcriptional regulator, AsnC family - none -
fig|6666666.229938.peg.873 CDS AP013044.1 1020125 1020337 2 + 213 Transcriptional regulator, AsnC family - none -
fig|6666666.229938.peg.874 CDS AP013044.1 1021744 1020581 -1 - 1164 Methylmalonyl-CoA decarboxylase, beta chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module
fig|6666666.229938.peg.875 CDS AP013044.1 1022184 1021753 -3 - 432 Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.229938.peg.876 CDS AP013044.1 1023115 1022231 -1 - 885 Membrane protein associated with methylmalonyl-CoA decarboxylase Na+ translocating decarboxylases and related biotin-dependent enzymes
fig|6666666.229938.peg.877 CDS AP013044.1 1024690 1023137 -1 - 1554 Methylmalonyl-CoA decarboxylase, alpha chain (EC 4.1.1.41) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Propionyl-CoA to Succinyl-CoA Module
fig|6666666.229938.peg.878 CDS AP013044.1 1025128 1024727 -1 - 402 Methylmalonyl-CoA epimerase (EC 5.1.99.1) Propionyl-CoA to Succinyl-CoA Module
fig|6666666.229938.peg.879 CDS AP013044.1 1026020 1025313 -2 - 708 Uridine monophosphate kinase (EC 2.7.4.22) CBSS-312309.3.peg.1965;
Ribosome recycling related cluster
fig|6666666.229938.peg.880 CDS AP013044.1 1026300 1026836 3 + 537 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.881 CDS AP013044.1 1026937 1028130 1 + 1194 putative anti-sigma factor - none -
fig|6666666.229938.peg.882 CDS AP013044.1 1028262 1031708 3 + 3447 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.883 CDS AP013044.1 1031736 1033625 3 + 1890 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.884 CDS AP013044.1 1033648 1034562 1 + 915 putative chitobiase - none -
fig|6666666.229938.peg.885 CDS AP013044.1 1035642 1034671 -3 - 972 Mannose-6-phosphate isomerase (EC 5.3.1.8) Mannose Metabolism
fig|6666666.229938.peg.886 CDS AP013044.1 1037829 1035736 -3 - 2094 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) Glycogen metabolism
fig|6666666.229938.peg.887 CDS AP013044.1 1039451 1040620 2 + 1170 Cell surface protein - none -
fig|6666666.229938.peg.888 CDS AP013044.1 1041164 1041027 -2 - 138 hypothetical protein - none -
fig|6666666.229938.peg.889 CDS AP013044.1 1041152 1041439 2 + 288 hypothetical protein - none -
fig|6666666.229938.peg.890 CDS AP013044.1 1041614 1045108 2 + 3495 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.891 CDS AP013044.1 1045111 1046898 1 + 1788 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.892 CDS AP013044.1 1046937 1047299 3 + 363 hypothetical protein - none -
fig|6666666.229938.peg.893 CDS AP013044.1 1047388 1047543 1 + 156 hypothetical protein - none -
fig|6666666.229938.peg.894 CDS AP013044.1 1048234 1047899 -1 - 336 Possible exported heavy-metal binding protein - none -
fig|6666666.229938.peg.895 CDS AP013044.1 1048489 1048265 -1 - 225 TonB-dependent outer membrane receptor - none -
fig|6666666.229938.peg.896 CDS AP013044.1 1048706 1048828 2 + 123 hypothetical protein - none -
fig|6666666.229938.peg.897 CDS AP013044.1 1048882 1050942 1 + 2061 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229938.peg.898 CDS AP013044.1 1050939 1052147 3 + 1209 Exonuclease SbcD DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.229938.peg.899 CDS AP013044.1 1052210 1055305 2 + 3096 Exonuclease SbcC DNA repair, bacterial;
Rad50-Mre11 DNA repair cluster
fig|6666666.229938.peg.900 CDS AP013044.1 1055429 1056400 2 + 972 Glucokinase (EC 2.7.1.2) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229938.peg.901 CDS AP013044.1 1057645 1056557 -1 - 1089 putative periplasmic protein kinase ArgK and related GTPases of G3E family - none -
fig|6666666.229938.peg.902 CDS AP013044.1 1059023 1057719 -2 - 1305 hypothetical protein - none -
fig|6666666.229938.peg.903 CDS AP013044.1 1059015 1059134 3 + 120 hypothetical protein - none -
fig|6666666.229938.peg.904 CDS AP013044.1 1059573 1059172 -3 - 402 FIG00936528: hypothetical protein - none -
fig|6666666.229938.peg.905 CDS AP013044.1 1060081 1059647 -1 - 435 Dihydrofolate reductase (EC 1.5.1.3) 5-FCL-like protein;
Folate Biosynthesis
fig|6666666.229938.peg.906 CDS AP013044.1 1060954 1060160 -1 - 795 Thymidylate synthase (EC 2.1.1.45) Folate Biosynthesis
fig|6666666.229938.peg.907 CDS AP013044.1 1060946 1061059 2 + 114 hypothetical protein - none -
fig|6666666.229938.peg.908 CDS AP013044.1 1062353 1061067 -2 - 1287 Uracil permease De Novo Pyrimidine Synthesis
fig|6666666.229938.peg.909 CDS AP013044.1 1063008 1062379 -3 - 630 Uracil phosphoribosyltransferase (EC 2.4.2.9) De Novo Pyrimidine Synthesis
fig|6666666.229938.peg.910 CDS AP013044.1 1065894 1063090 -3 - 2805 DNA polymerase I (EC 2.7.7.7) DNA Repair Base Excision
fig|6666666.229938.peg.911 CDS AP013044.1 1065984 1066958 3 + 975 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229938.peg.912 CDS AP013044.1 1067467 1067033 -1 - 435 hypothetical protein - none -
fig|6666666.229938.peg.913 CDS AP013044.1 1067643 1067518 -3 - 126 hypothetical protein - none -
fig|6666666.229938.peg.914 CDS AP013044.1 1067768 1071031 2 + 3264 membrane protein, putative - none -
fig|6666666.229938.peg.915 CDS AP013044.1 1071038 1071652 2 + 615 Polysaccharide deacetylase - none -
fig|6666666.229938.peg.916 CDS AP013044.1 1073951 1071774 -2 - 2178 Dipeptidyl peptidase IV - none -
fig|6666666.229938.peg.917 CDS AP013044.1 1075319 1073982 -2 - 1338 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.229938.peg.918 CDS AP013044.1 1075791 1075324 -3 - 468 hypothetical protein - none -
fig|6666666.229938.peg.919 CDS AP013044.1 1077400 1075880 -1 - 1521 Ribosylnicotinamide kinase (EC 2.7.1.22) homolog / Unknown conserved in Flavobacteria - none -
fig|6666666.229938.peg.920 CDS AP013044.1 1077416 1077547 2 + 132 hypothetical protein - none -
fig|6666666.229938.peg.921 CDS AP013044.1 1077621 1078697 3 + 1077 NLP/P60 family protein - none -
fig|6666666.229938.peg.922 CDS AP013044.1 1078694 1079848 2 + 1155 L-alanine-DL-glutamate epimerase Muconate lactonizing enzyme family;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229938.peg.923 CDS AP013044.1 1080075 1080884 3 + 810 hypothetical protein - none -
fig|6666666.229938.peg.924 CDS AP013044.1 1080897 1082966 3 + 2070 FIG00898434: hypothetical protein - none -
fig|6666666.229938.peg.925 CDS AP013044.1 1083037 1083819 1 + 783 Fe-S OXIDOREDUCTASE (1.8.-.-) - none -
fig|6666666.229938.peg.926 CDS AP013044.1 1083859 1084275 1 + 417 Uncharacterized protein TM0723 - none -
fig|6666666.229938.peg.927 CDS AP013044.1 1084590 1084390 -3 - 201 hypothetical protein - none -
fig|6666666.229938.peg.928 CDS AP013044.1 1085959 1084889 -1 - 1071 hypothetical protein - none -
fig|6666666.229938.peg.929 CDS AP013044.1 1086649 1086798 1 + 150 hypothetical protein - none -
fig|6666666.229938.peg.930 CDS AP013044.1 1088495 1086831 -2 - 1665 hypothetical protein - none -
fig|6666666.229938.peg.931 CDS AP013044.1 1091563 1088495 -1 - 3069 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.932 CDS AP013044.1 1093473 1091755 -3 - 1719 FIG01127817: hypothetical protein - none -
fig|6666666.229938.peg.933 CDS AP013044.1 1094890 1093487 -1 - 1404 D-xylose proton-symporter XylE Xylose utilization
fig|6666666.229938.peg.934 CDS AP013044.1 1096003 1094894 -1 - 1110 FIG00938776: hypothetical protein - none -
fig|6666666.229938.peg.935 CDS AP013044.1 1096989 1096531 -3 - 459 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) Ribonucleotide reduction
fig|6666666.229938.peg.936 CDS AP013044.1 1099118 1096983 -2 - 2136 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Ribonucleotide reduction
fig|6666666.229938.peg.937 CDS AP013044.1 1100073 1099672 -3 - 402 HIT family protein - none -
fig|6666666.229938.peg.938 CDS AP013044.1 1100557 1100087 -1 - 471 Transcription elongation factor GreA Transcription factors bacterial
fig|6666666.229938.peg.939 CDS AP013044.1 1101909 1100749 -3 - 1161 FIG00897677: hypothetical protein - none -
fig|6666666.229938.peg.940 CDS AP013044.1 1102007 1102636 2 + 630 Arabinose 5-phosphate isomerase (EC 5.3.1.13) - none -
fig|6666666.229938.peg.941 CDS AP013044.1 1102624 1103550 1 + 927 Fructokinase (EC 2.7.1.4) - none -
fig|6666666.229938.peg.942 CDS AP013044.1 1106398 1103582 -1 - 2817 Excinuclease ABC subunit A paralog in greater Bacteroides group DNA repair, UvrABC system
fig|6666666.229938.peg.943 CDS AP013044.1 1107937 1106468 -1 - 1470 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229938.peg.944 CDS AP013044.1 1108010 1108168 2 + 159 hypothetical protein - none -
fig|6666666.229938.peg.945 CDS AP013044.1 1108177 1110432 1 + 2256 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.229938.peg.946 CDS AP013044.1 1113459 1110997 -3 - 2463 hypothetical protein - none -
fig|6666666.229938.peg.947 CDS AP013044.1 1114269 1113502 -3 - 768 Glycosyl transferase, group 2 family protein - none -
fig|6666666.229938.peg.948 CDS AP013044.1 1115535 1114273 -3 - 1263 Glycosyl transferase, group 1 family protein - none -
fig|6666666.229938.peg.949 CDS AP013044.1 1116256 1115537 -1 - 720 hypothetical protein - none -
fig|6666666.229938.peg.950 CDS AP013044.1 1117461 1116253 -3 - 1209 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.229938.peg.951 CDS AP013044.1 1118625 1117465 -3 - 1161 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis
fig|6666666.229938.peg.952 CDS AP013044.1 1119871 1118627 -1 - 1245 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229938.peg.953 CDS AP013044.1 1121157 1120036 -3 - 1122 hypothetical protein - none -
fig|6666666.229938.peg.954 CDS AP013044.1 1121144 1121281 2 + 138 hypothetical protein - none -
fig|6666666.229938.peg.955 CDS AP013044.1 1121286 1121423 3 + 138 hypothetical protein - none -
fig|6666666.229938.peg.956 CDS AP013044.1 1122926 1121577 -2 - 1350 Huntington interacting protein HYPE - none -
fig|6666666.229938.peg.957 CDS AP013044.1 1124948 1123131 -2 - 1818 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229938.peg.958 CDS AP013044.1 1126101 1124953 -3 - 1149 TPR/glycosyl transferase domain protein - none -
fig|6666666.229938.peg.959 CDS AP013044.1 1126879 1126115 -1 - 765 hypothetical protein - none -
fig|6666666.229938.peg.960 CDS AP013044.1 1128218 1126893 -2 - 1326 hypothetical protein - none -
fig|6666666.229938.peg.961 CDS AP013044.1 1128919 1128245 -1 - 675 Legionaminic acid biosynthesis protein PtmA - none -
fig|6666666.229938.peg.962 CDS AP013044.1 1129770 1128985 -3 - 786 FIG003879: Predicted amidohydrolase CBSS-354.1.peg.2917
fig|6666666.229938.peg.963 CDS AP013044.1 1131064 1129772 -1 - 1293 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) CBSS-196164.1.peg.461
fig|6666666.229938.peg.964 CDS AP013044.1 1132049 1131066 -2 - 984 possible Oxidoreductase - none -
fig|6666666.229938.peg.965 CDS AP013044.1 1132762 1132046 -1 - 717 N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43) CMP-N-acetylneuraminate Biosynthesis
fig|6666666.229938.peg.966 CDS AP013044.1 1133972 1132857 -2 - 1116 Legionaminic acid biosynthesis protein PtmG - none -
fig|6666666.229938.peg.967 CDS AP013044.1 1135432 1134584 -1 - 849 D-glycero-D-manno-heptose 1-phosphate guanosyltransferase - none -
fig|6666666.229938.peg.968 CDS AP013044.1 1136723 1135623 -2 - 1101 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis
fig|6666666.229938.peg.969 CDS AP013044.1 1137790 1136780 -1 - 1011 N-acetylneuraminate synthase (EC 2.5.1.56) CMP-N-acetylneuraminate Biosynthesis
fig|6666666.229938.peg.970 CDS AP013044.1 1138407 1137787 -3 - 621 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.229938.peg.971 CDS AP013044.1 1139261 1138404 -2 - 858 UDP-glucuronic acid oxidase (UDP-4-keto-hexauronic acid decarboxylating) (EC 1.1.1.305) / UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.13) - none -
fig|6666666.229938.peg.972 CDS AP013044.1 1139900 1139262 -2 - 639 FIG00675648: hypothetical protein - none -
fig|6666666.229938.peg.973 CDS AP013044.1 1141060 1139897 -1 - 1164 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase - none -
fig|6666666.229938.peg.974 CDS AP013044.1 1142046 1141066 -3 - 981 UDP-glucose 4-epimerase (EC 5.1.3.2) Lactose and Galactose Uptake and Utilization;
Rhamnose containing glycans
fig|6666666.229938.peg.975 CDS AP013044.1 1143494 1142043 -2 - 1452 Lipopolysaccharide biosynthesis protein WzxC - none -
fig|6666666.229938.peg.976 CDS AP013044.1 1144478 1143504 -2 - 975 Myosin heavy chain - none -
fig|6666666.229938.peg.977 CDS AP013044.1 1145562 1144498 -3 - 1065 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) - none -
fig|6666666.229938.peg.978 CDS AP013044.1 1147000 1145744 -1 - 1257 Transporter - none -
fig|6666666.229938.peg.979 CDS AP013044.1 1148637 1147039 -3 - 1599 Carboxy-terminal processing protease - none -
fig|6666666.229938.peg.980 CDS AP013044.1 1149113 1148634 -2 - 480 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
Coenzyme A Biosynthesis
fig|6666666.229938.peg.981 CDS AP013044.1 1150989 1149124 -3 - 1866 Topoisomerase IV subunit B (EC 5.99.1.-) DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229938.peg.982 CDS AP013044.1 1152123 1150993 -3 - 1131 FIG00935709: hypothetical protein - none -
fig|6666666.229938.peg.983 CDS AP013044.1 1153665 1152202 -3 - 1464 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) Metallocarboxypeptidases (EC 3.4.17.-);
Murein Hydrolases
fig|6666666.229938.peg.984 CDS AP013044.1 1153717 1153833 1 + 117 hypothetical protein - none -
fig|6666666.229938.peg.985 CDS AP013044.1 1156853 1154094 -2 - 2760 FIG00898139: hypothetical protein - none -
fig|6666666.229938.peg.986 CDS AP013044.1 1157780 1157019 -2 - 762 hypothetical protein - none -
fig|6666666.229938.peg.987 CDS AP013044.1 1158763 1157777 -1 - 987 ADP-heptose--LPS heptosyltransferase, putative - none -
fig|6666666.229938.peg.988 CDS AP013044.1 1159586 1158855 -2 - 732 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 5-FCL-like protein;
De Novo Purine Biosynthesis
fig|6666666.229938.peg.989 CDS AP013044.1 1159602 1159838 3 + 237 Acyl carrier protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229938.peg.990 CDS AP013044.1 1159856 1161112 2 + 1257 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) - none -
fig|6666666.229938.peg.991 CDS AP013044.1 1161121 1161912 1 + 792 Ribonuclease III (EC 3.1.26.3) RNA processing and degradation, bacterial
fig|6666666.229938.peg.992 CDS AP013044.1 1162488 1162135 -3 - 354 MmcQ - none -
fig|6666666.229938.peg.993 CDS AP013044.1 1163610 1162600 -3 - 1011 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229938.peg.994 CDS AP013044.1 1163756 1165192 2 + 1437 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.229938.peg.995 CDS AP013044.1 1165370 1168543 2 + 3174 OmpA-related protein - none -
fig|6666666.229938.peg.996 CDS AP013044.1 1169301 1171178 3 + 1878 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229938.peg.997 CDS AP013044.1 1171224 1173029 3 + 1806 Excinuclease ABC subunit C DNA repair, UvrABC system
fig|6666666.229938.peg.998 CDS AP013044.1 1173081 1173506 3 + 426 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) - none -
fig|6666666.229938.peg.999 CDS AP013044.1 1173627 1173872 3 + 246 hypothetical protein - none -
fig|6666666.229938.peg.1000 CDS AP013044.1 1175340 1173862 -3 - 1479 Zinc metalloproteinase precursor (EC 3.4.24.29) / aureolysin Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.229938.peg.1001 CDS AP013044.1 1176602 1176195 -2 - 408 hypothetical protein - none -
fig|6666666.229938.peg.1002 CDS AP013044.1 1178052 1176658 -3 - 1395 IS1478 transposase - none -
fig|6666666.229938.peg.1003 CDS AP013044.1 1179420 1178098 -3 - 1323 hypothetical protein - none -
fig|6666666.229938.peg.1004 CDS AP013044.1 1179942 1180082 3 + 141 hypothetical protein - none -
fig|6666666.229938.peg.1005 CDS AP013044.1 1181938 1180349 -1 - 1590 Zinc metalloproteinase precursor (EC 3.4.24.29) / aureolysin Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.229938.peg.1006 CDS AP013044.1 1182489 1182376 -3 - 114 hypothetical protein - none -
fig|6666666.229938.peg.1007 CDS AP013044.1 1182643 1182768 1 + 126 hypothetical protein - none -
fig|6666666.229938.peg.1008 CDS AP013044.1 1185359 1182885 -2 - 2475 Zinc metalloproteinase precursor (EC 3.4.24.29) / aureolysin Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.229938.peg.1009 CDS AP013044.1 1185886 1185374 -1 - 513 hypothetical protein - none -
fig|6666666.229938.peg.1010 CDS AP013044.1 1186011 1185883 -3 - 129 hypothetical protein - none -
fig|6666666.229938.peg.1011 CDS AP013044.1 1187423 1186491 -2 - 933 Ribonuclease Z (EC 3.1.26.11) tRNA processing
fig|6666666.229938.peg.1012 CDS AP013044.1 1187514 1188980 3 + 1467 RNA polymerase sigma-54 factor RpoN Transcription initiation, bacterial sigma factors
fig|6666666.229938.peg.1013 CDS AP013044.1 1189061 1189438 2 + 378 Glycine cleavage system H protein CBSS-315749.4.peg.3658;
Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.229938.peg.1014 CDS AP013044.1 1189445 1189951 2 + 507 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) De Novo Purine Biosynthesis
fig|6666666.229938.peg.1015 CDS AP013044.1 1189948 1191777 1 + 1830 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229938.peg.1016 CDS AP013044.1 1196496 1192738 -3 - 3759 hypothetical protein - none -
fig|6666666.229938.peg.1017 CDS AP013044.1 1196903 1198558 2 + 1656 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes - none -
fig|6666666.229938.peg.1018 CDS AP013044.1 1198739 1199053 2 + 315 hypothetical protein - none -
fig|6666666.229938.peg.1019 CDS AP013044.1 1199050 1199631 1 + 582 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) RuvABC plus a hypothetical
fig|6666666.229938.peg.1020 CDS AP013044.1 1201142 1199673 -2 - 1470 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) Arginine and Ornithine Degradation;
Glutamate dehydrogenases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229938.peg.1021 CDS AP013044.1 1201110 1204091 3 + 2982 Phosphoenolpyruvate synthase / Pyruvate phosphate dikinase - none -
fig|6666666.229938.peg.1022 CDS AP013044.1 1204194 1204069 -3 - 126 hypothetical protein - none -
fig|6666666.229938.peg.1023 CDS AP013044.1 1204211 1207210 2 + 3000 TPR-domain containing protein - none -
fig|6666666.229938.peg.1024 CDS AP013044.1 1207228 1209057 1 + 1830 putative TonB-dependent receptor - none -
fig|6666666.229938.peg.1025 CDS AP013044.1 1209367 1209059 -1 - 309 hypothetical protein - none -
fig|6666666.229938.peg.1026 CDS AP013044.1 1210858 1209440 -1 - 1419 Adenosylhomocysteinase (EC 3.3.1.1) Methionine Degradation
fig|6666666.229938.peg.1027 CDS AP013044.1 1211200 1212399 1 + 1200 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) - none -
fig|6666666.229938.peg.1028 CDS AP013044.1 1212406 1213434 1 + 1029 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) - none -
fig|6666666.229938.peg.1029 CDS AP013044.1 1213503 1213781 3 + 279 Transporter - none -
fig|6666666.229938.peg.1030 CDS AP013044.1 1213809 1214543 3 + 735 hypothetical protein - none -
fig|6666666.229938.peg.1031 CDS AP013044.1 1214582 1215634 2 + 1053 tRNA dihydrouridine synthase B (EC 1.-.-.-) tRNA modification Bacteria
fig|6666666.229938.peg.1032 CDS AP013044.1 1217070 1215628 -3 - 1443 FIG00898042: hypothetical protein - none -
fig|6666666.229938.peg.1033 CDS AP013044.1 1217060 1218244 2 + 1185 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis
fig|6666666.229938.peg.1034 CDS AP013044.1 1218789 1221089 3 + 2301 Outer membrane receptor proteins, mostly Fe transport Hemin transport system
fig|6666666.229938.peg.1035 CDS AP013044.1 1221759 1222055 3 + 297 hypothetical protein - none -
fig|6666666.229938.peg.1036 CDS AP013044.1 1222329 1224173 3 + 1845 Putative cytoplasmic protein - none -
fig|6666666.229938.peg.1037 CDS AP013044.1 1224392 1225093 2 + 702 Transcriptional regulator - none -
fig|6666666.229938.peg.1038 CDS AP013044.1 1225379 1225585 2 + 207 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229938.peg.1039 CDS AP013044.1 1226080 1225718 -1 - 363 Rhodanese-like domain protein - none -
fig|6666666.229938.peg.1040 CDS AP013044.1 1226185 1227726 1 + 1542 N-acetylgalactosamine-6-sulfatase - none -
fig|6666666.229938.peg.1041 CDS AP013044.1 1227723 1228070 3 + 348 hypothetical protein - none -
fig|6666666.229938.peg.1042 CDS AP013044.1 1228077 1228991 3 + 915 Deoxyribose-phosphate aldolase (EC 4.1.2.4) Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229938.peg.1043 CDS AP013044.1 1230667 1228988 -1 - 1680 Uridine kinase (EC 2.7.1.48) - none -
fig|6666666.229938.peg.1044 CDS AP013044.1 1230731 1232536 2 + 1806 Sodium-dependent phosphate transporter NhaA, NhaD and Sodium-dependent phosphate transporters;
Phosphate metabolism
fig|6666666.229938.peg.1045 CDS AP013044.1 1232536 1233942 1 + 1407 Uronate isomerase (EC 5.3.1.12) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229938.peg.1046 CDS AP013044.1 1234070 1235053 2 + 984 6-phosphofructokinase (EC 2.7.1.11) Glycolysis and Gluconeogenesis
fig|6666666.229938.peg.1047 CDS AP013044.1 1235111 1235410 2 + 300 hypothetical protein - none -
fig|6666666.229938.peg.1048 CDS AP013044.1 1236436 1237419 1 + 984 FIG00649403: hypothetical protein - none -
fig|6666666.229938.peg.1049 CDS AP013044.1 1237670 1238338 2 + 669 hypothetical protein - none -
fig|6666666.229938.peg.1050 CDS AP013044.1 1238444 1238998 2 + 555 FIG00404596: hypothetical protein - none -
fig|6666666.229938.peg.1051 CDS AP013044.1 1239009 1240490 3 + 1482 FIG00652157: hypothetical protein - none -
fig|6666666.229938.peg.1052 CDS AP013044.1 1240492 1241463 1 + 972 MoxR-like ATPases - none -
fig|6666666.229938.peg.1053 CDS AP013044.1 1241463 1242776 3 + 1314 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229938.peg.1054 CDS AP013044.1 1245589 1243169 -1 - 2421 Zinc metalloproteinase precursor (EC 3.4.24.29) / aureolysin Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.229938.peg.1055 CDS AP013044.1 1246248 1246120 -3 - 129 hypothetical protein - none -
fig|6666666.229938.peg.1056 CDS AP013044.1 1247435 1246302 -2 - 1134 Zinc metalloproteinase precursor (EC 3.4.24.29) / aureolysin Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.229938.peg.1057 CDS AP013044.1 1247613 1247449 -3 - 165 hypothetical protein - none -
fig|6666666.229938.peg.1058 CDS AP013044.1 1248526 1247816 -1 - 711 hypothetical protein - none -
fig|6666666.229938.peg.1059 CDS AP013044.1 1250804 1249503 -2 - 1302 Zinc metalloproteinase precursor (EC 3.4.24.29) / aureolysin Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.229938.peg.1060 CDS AP013044.1 1251736 1250759 -1 - 978 Lysyl endopeptidase (EC 3.4.21.50) ## LysXxx (including Pro) Serine endopeptidase (EC 3.4.21.-)
fig|6666666.229938.peg.1061 CDS AP013044.1 1252158 1251733 -3 - 426 hypothetical protein - none -
fig|6666666.229938.peg.1062 CDS AP013044.1 1252570 1254624 1 + 2055 Alpha-L-fucosidase (EC 3.2.1.51) - none -
fig|6666666.229938.peg.1063 CDS AP013044.1 1254679 1255344 1 + 666 MarC family integral membrane protein - none -
fig|6666666.229938.peg.1064 CDS AP013044.1 1255632 1256906 3 + 1275 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) De Novo Purine Biosynthesis
fig|6666666.229938.peg.1065 CDS AP013044.1 1256922 1257938 3 + 1017 hypothetical protein - none -
fig|6666666.229938.peg.1066 CDS AP013044.1 1257926 1258375 2 + 450 probable integral membrane protein Cj0341c - none -
fig|6666666.229938.peg.1067 CDS AP013044.1 1258414 1258596 1 + 183 hypothetical protein - none -
fig|6666666.229938.peg.1068 CDS AP013044.1 1258651 1260018 1 + 1368 hypothetical protein - none -
fig|6666666.229938.peg.1069 CDS AP013044.1 1261226 1260093 -2 - 1134 3-carboxymuconate cyclase - none -
fig|6666666.229938.peg.1070 CDS AP013044.1 1261908 1263623 3 + 1716 putative DNA modification methylase - none -
fig|6666666.229938.peg.1071 CDS AP013044.1 1263608 1264405 2 + 798 hypothetical protein - none -
fig|6666666.229938.peg.1072 CDS AP013044.1 1264823 1265059 2 + 237 hypothetical protein - none -
fig|6666666.229938.peg.1073 CDS AP013044.1 1265509 1266033 1 + 525 membrane protein, putative - none -
fig|6666666.229938.peg.1074 CDS AP013044.1 1266234 1269251 3 + 3018 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.1075 CDS AP013044.1 1269314 1270804 2 + 1491 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1076 CDS AP013044.1 1270824 1271615 3 + 792 RTX toxins and related Ca2+-binding proteins - none -
fig|6666666.229938.peg.1077 CDS AP013044.1 1271669 1272430 2 + 762 FIG00653406: hypothetical protein - none -
fig|6666666.229938.peg.1078 CDS AP013044.1 1272427 1273779 1 + 1353 FIG01018870: hypothetical protein - none -
fig|6666666.229938.peg.1079 CDS AP013044.1 1273848 1273985 3 + 138 hypothetical protein - none -
fig|6666666.229938.peg.1080 CDS AP013044.1 1274539 1273982 -1 - 558 hypothetical protein - none -
fig|6666666.229938.peg.1081 CDS AP013044.1 1277378 1275360 -2 - 2019 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1082 CDS AP013044.1 1280627 1277400 -2 - 3228 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.1083 CDS AP013044.1 1280700 1280921 3 + 222 hypothetical protein - none -
fig|6666666.229938.peg.1084 CDS AP013044.1 1281833 1281366 -2 - 468 hypothetical protein - none -
fig|6666666.229938.peg.1085 CDS AP013044.1 1283711 1281870 -2 - 1842 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1086 CDS AP013044.1 1286855 1283754 -2 - 3102 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1087 CDS AP013044.1 1288004 1287825 -2 - 180 hypothetical protein - none -
fig|6666666.229938.peg.1088 CDS AP013044.1 1288865 1288014 -2 - 852 Nitric oxide-dependent regulator DnrN or NorA Iron-sulfur cluster assembly;
Nitrosative stress
fig|6666666.229938.peg.1089 CDS AP013044.1 1289866 1288928 -1 - 939 Sugar phosphate isomerases/epimerases family protein YcjR Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.1090 CDS AP013044.1 1291263 1289866 -3 - 1398 dehydrogenase, putative exo-alpha-sialidase - none -
fig|6666666.229938.peg.1091 CDS AP013044.1 1292810 1291305 -2 - 1506 FIG00896786: hypothetical protein - none -
fig|6666666.229938.peg.1092 CDS AP013044.1 1293029 1292904 -2 - 126 hypothetical protein - none -
fig|6666666.229938.peg.1093 CDS AP013044.1 1293318 1293067 -3 - 252 hypothetical protein - none -
fig|6666666.229938.peg.1094 CDS AP013044.1 1293351 1294196 3 + 846 hypothetical protein - none -
fig|6666666.229938.peg.1095 CDS AP013044.1 1294278 1295822 3 + 1545 Glycyl-tRNA synthetase (EC 6.1.1.14) Glycyl-tRNA synthetase containing cluster;
tRNA aminoacylation, Gly
fig|6666666.229938.peg.1096 CDS AP013044.1 1295856 1296446 3 + 591 peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.229938.peg.1097 CDS AP013044.1 1297104 1296457 -3 - 648 FIG00897871: hypothetical protein - none -
fig|6666666.229938.peg.1098 CDS AP013044.1 1298823 1297183 -3 - 1641 Fumarate hydratase class I, anaerobic (EC 4.2.1.2) - none -
fig|6666666.229938.peg.1099 CDS AP013044.1 1299043 1298858 -1 - 186 hypothetical protein - none -
fig|6666666.229938.peg.1100 CDS AP013044.1 1299806 1299117 -2 - 690 Transcriptional regulatory protein rprY - none -
fig|6666666.229938.peg.1101 CDS AP013044.1 1301145 1299799 -3 - 1347 two-component system sensor histidine kinase - none -
fig|6666666.229938.peg.1102 CDS AP013044.1 1301321 1301503 2 + 183 hypothetical protein - none -
fig|6666666.229938.peg.1103 CDS AP013044.1 1301838 1302005 3 + 168 hypothetical protein - none -
fig|6666666.229938.peg.1104 CDS AP013044.1 1302278 1302394 2 + 117 hypothetical protein - none -
fig|6666666.229938.peg.1105 CDS AP013044.1 1302710 1302850 2 + 141 hypothetical protein - none -
fig|6666666.229938.peg.1106 CDS AP013044.1 1303221 1303352 3 + 132 hypothetical protein - none -
fig|6666666.229938.peg.1107 CDS AP013044.1 1303602 1304747 3 + 1146 HlyD family secretion protein - none -
fig|6666666.229938.peg.1108 CDS AP013044.1 1304762 1306921 2 + 2160 probable bacteriocin/lantibiotic ABC transporter, ATP-binding protein - none -
fig|6666666.229938.peg.1109 CDS AP013044.1 1306918 1308225 1 + 1308 Outer membrane efflux protein - none -
fig|6666666.229938.peg.1110 CDS AP013044.1 1308242 1308586 2 + 345 hypothetical protein - none -
fig|6666666.229938.peg.1111 CDS AP013044.1 1309712 1309981 2 + 270 hypothetical protein - none -
fig|6666666.229938.peg.1112 CDS AP013044.1 1310829 1310990 3 + 162 hypothetical protein - none -
fig|6666666.229938.peg.1113 CDS AP013044.1 1311366 1311229 -3 - 138 hypothetical protein - none -
fig|6666666.229938.peg.1114 CDS AP013044.1 1311441 1314071 3 + 2631 FIG00938541: hypothetical protein - none -
fig|6666666.229938.peg.1115 CDS AP013044.1 1314108 1317443 3 + 3336 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1116 CDS AP013044.1 1317487 1318806 1 + 1320 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1117 CDS AP013044.1 1318806 1318925 3 + 120 hypothetical protein - none -
fig|6666666.229938.peg.1118 CDS AP013044.1 1321150 1319132 -1 - 2019 Outer membrane lipoprotein omp16 precursor Ton and Tol transport systems
fig|6666666.229938.peg.1119 CDS AP013044.1 1322428 1321160 -1 - 1269 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229938.peg.1120 CDS AP013044.1 1326506 1322430 -2 - 4077 DNA-binding response regulator, AraC family - none -
fig|6666666.229938.peg.1121 CDS AP013044.1 1326791 1326615 -2 - 177 hypothetical protein - none -
fig|6666666.229938.peg.1122 CDS AP013044.1 1326747 1328597 3 + 1851 FIG00898157: hypothetical protein - none -
fig|6666666.229938.peg.1123 CDS AP013044.1 1330176 1328704 -3 - 1473 Cysteinyl-tRNA synthetase (EC 6.1.1.16) tRNA aminoacylation, Cys
fig|6666666.229938.peg.1124 CDS AP013044.1 1330296 1331021 3 + 726 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) - none -
fig|6666666.229938.peg.1125 CDS AP013044.1 1331105 1331350 2 + 246 Acyl carrier protein Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229938.peg.1126 CDS AP013044.1 1331352 1332260 3 + 909 Lysophospholipid acyltransferase - none -
fig|6666666.229938.peg.1127 CDS AP013044.1 1332244 1333323 1 + 1080 Biotin synthesis protein BioC Biotin biosynthesis Experimental
fig|6666666.229938.peg.1128 CDS AP013044.1 1333345 1333800 1 + 456 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60) - none -
fig|6666666.229938.peg.1129 CDS AP013044.1 1333811 1334236 2 + 426 possible thioesterase - none -
fig|6666666.229938.peg.1130 CDS AP013044.1 1334233 1335420 1 + 1188 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41) - none -
fig|6666666.229938.peg.1131 CDS AP013044.1 1335510 1336049 3 + 540 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) - none -
fig|6666666.229938.peg.1132 CDS AP013044.1 1336068 1336325 3 + 258 Acyl carrier protein (ACP1) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229938.peg.1133 CDS AP013044.1 1341030 1336465 -3 - 4566 hypothetical protein - none -
fig|6666666.229938.peg.1134 CDS AP013044.1 1342129 1341038 -1 - 1092 hypothetical protein - none -
fig|6666666.229938.peg.1135 CDS AP013044.1 1342549 1343511 1 + 963 hypothetical protein - none -
fig|6666666.229938.peg.1136 CDS AP013044.1 1343517 1344080 3 + 564 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) - none -
fig|6666666.229938.peg.1137 CDS AP013044.1 1344164 1344385 2 + 222 FIG00935798: hypothetical protein - none -
fig|6666666.229938.peg.1138 CDS AP013044.1 1344489 1345481 3 + 993 hypothetical protein - none -
fig|6666666.229938.peg.1139 CDS AP013044.1 1345512 1346954 3 + 1443 GldJ - none -
fig|6666666.229938.peg.1140 CDS AP013044.1 1346987 1348075 2 + 1089 FIG00896507: hypothetical protein - none -
fig|6666666.229938.peg.1141 CDS AP013044.1 1348127 1349692 2 + 1566 hypothetical protein - none -
fig|6666666.229938.peg.1142 CDS AP013044.1 1349721 1350833 3 + 1113 GldN - none -
fig|6666666.229938.peg.1143 CDS AP013044.1 1351488 1350847 -3 - 642 FIG00649844: hypothetical protein - none -
fig|6666666.229938.peg.1144 CDS AP013044.1 1352307 1351492 -3 - 816 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.229938.peg.1145 CDS AP013044.1 1353776 1352367 -2 - 1410 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.229938.peg.1146 CDS AP013044.1 1354524 1353793 -3 - 732 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229938.peg.1147 CDS AP013044.1 1354636 1355910 1 + 1275 FIG00937754: hypothetical protein - none -
fig|6666666.229938.peg.1148 CDS AP013044.1 1355979 1357892 3 + 1914 FIG00899092: hypothetical protein - none -
fig|6666666.229938.peg.1149 CDS AP013044.1 1357996 1358715 1 + 720 hypothetical protein - none -
fig|6666666.229938.peg.1150 CDS AP013044.1 1358798 1359703 2 + 906 Mobile element protein - none -
fig|6666666.229938.peg.1151 CDS AP013044.1 1359740 1359868 2 + 129 hypothetical protein - none -
fig|6666666.229938.peg.1152 CDS AP013044.1 1360852 1360718 -1 - 135 hypothetical protein - none -
fig|6666666.229938.peg.1153 CDS AP013044.1 1360975 1365477 1 + 4503 hypothetical protein - none -
fig|6666666.229938.peg.1154 CDS AP013044.1 1365734 1366333 2 + 600 Glutathione peroxidase family protein - none -
fig|6666666.229938.peg.1155 CDS AP013044.1 1366633 1367196 1 + 564 Ribosome recycling factor Ribosome recycling related cluster;
Translation termination factors bacterial
fig|6666666.229938.peg.1156 CDS AP013044.1 1367196 1368128 3 + 933 Ribosome small subunit-stimulated GTPase EngC Universal GTPases
fig|6666666.229938.peg.1157 CDS AP013044.1 1369465 1368140 -1 - 1326 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) - none -
fig|6666666.229938.peg.1158 CDS AP013044.1 1369792 1369667 -1 - 126 hypothetical protein - none -
fig|6666666.229938.peg.1159 CDS AP013044.1 1369926 1372946 3 + 3021 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.229938.peg.1160 CDS AP013044.1 1372963 1374615 1 + 1653 hypothetical protein - none -
fig|6666666.229938.peg.1161 CDS AP013044.1 1375115 1374975 -2 - 141 hypothetical protein - none -
fig|6666666.229938.peg.1162 CDS AP013044.1 1376459 1375248 -2 - 1212 Acetate kinase (EC 2.7.2.1) CBSS-257314.1.peg.752;
Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229938.peg.1163 CDS AP013044.1 1377421 1376456 -1 - 966 Phosphate acetyltransferase (EC 2.3.1.8) Fermentations: Mixed acid;
Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
fig|6666666.229938.peg.1164 CDS AP013044.1 1378302 1377529 -3 - 774 Diadenylate cyclase spyDAC; Bacterial checkpoint controller DisA with nucleotide-binding domain Bacterial checkpoint-control-related cluster;
Bacterial checkpoint-control-related cluster
fig|6666666.229938.peg.1165 CDS AP013044.1 1379154 1378312 -3 - 843 Dihydropteroate synthase (EC 2.5.1.15) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229938.peg.1166 CDS AP013044.1 1379232 1380527 3 + 1296 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan biosynthesis--gjo
fig|6666666.229938.peg.1167 CDS AP013044.1 1380574 1380711 1 + 138 hypothetical protein - none -
fig|6666666.229938.peg.1168 CDS AP013044.1 1380842 1382107 2 + 1266 PAP2 superfamily protein - none -
fig|6666666.229938.peg.1169 CDS AP013044.1 1383594 1382332 -3 - 1263 Collagenase precursor (EC 3.4.-.-) - none -
fig|6666666.229938.peg.1170 CDS AP013044.1 1384532 1383600 -2 - 933 MscS family mechanosensitive ion channel - none -
fig|6666666.229938.peg.1171 CDS AP013044.1 1386875 1385973 -2 - 903 hypothetical protein - none -
fig|6666666.229938.peg.1172 CDS AP013044.1 1388181 1386868 -3 - 1314 IS1380-Spn1, transposase - none -
fig|6666666.229938.peg.1173 CDS AP013044.1 1389448 1388489 -1 - 960 Putative DNA-binding protein in cluster with Type I restriction-modification system Restriction-Modification System
fig|6666666.229938.peg.1174 CDS AP013044.1 1392670 1389563 -1 - 3108 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229938.peg.1175 CDS AP013044.1 1393842 1392667 -3 - 1176 Anticodon nuclease - none -
fig|6666666.229938.peg.1176 CDS AP013044.1 1394441 1393845 -2 - 597 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229938.peg.1177 CDS AP013044.1 1394739 1394452 -3 - 288 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229938.peg.1178 CDS AP013044.1 1396601 1395054 -2 - 1548 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229938.peg.1179 CDS AP013044.1 1396965 1397255 3 + 291 FIG00938167: hypothetical protein - none -
fig|6666666.229938.peg.1180 CDS AP013044.1 1397438 1398097 2 + 660 FIG00938084: hypothetical protein - none -
fig|6666666.229938.peg.1181 CDS AP013044.1 1398771 1398992 3 + 222 hypothetical protein - none -
fig|6666666.229938.peg.1182 CDS AP013044.1 1399325 1400530 2 + 1206 putative DNA methylase - none -
fig|6666666.229938.peg.1183 CDS AP013044.1 1401360 1400641 -3 - 720 FIG00936210: hypothetical protein - none -
fig|6666666.229938.peg.1184 CDS AP013044.1 1401543 1402823 3 + 1281 Mobile element protein - none -
fig|6666666.229938.peg.1185 CDS AP013044.1 1402816 1403823 1 + 1008 putative integrase/recombinase - none -
fig|6666666.229938.peg.1186 CDS AP013044.1 1403810 1404838 2 + 1029 Mobile element protein - none -
fig|6666666.229938.peg.1187 CDS AP013044.1 1405112 1404924 -2 - 189 FIG00936210: hypothetical protein - none -
fig|6666666.229938.peg.1188 CDS AP013044.1 1405852 1405145 -1 - 708 FIG00935812: hypothetical protein - none -
fig|6666666.229938.peg.1189 CDS AP013044.1 1406967 1406095 -3 - 873 FIG00938431: hypothetical protein - none -
fig|6666666.229938.peg.1190 CDS AP013044.1 1407494 1407186 -2 - 309 DNA binding protein, excisionase family, putative - none -
fig|6666666.229938.peg.1191 CDS AP013044.1 1407982 1407482 -1 - 501 Toprim domain protein CBSS-315749.4.peg.3658
fig|6666666.229938.peg.1192 CDS AP013044.1 1408772 1408209 -2 - 564 Heparinase II/III family protein - none -
fig|6666666.229938.peg.1193 CDS AP013044.1 1410462 1408831 -3 - 1632 Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) - none -
fig|6666666.229938.peg.1194 CDS AP013044.1 1411370 1410495 -2 - 876 Purine nucleoside phosphorylase (EC 2.4.2.1) Adenosyl nucleosidases;
Deoxyribose and Deoxynucleoside Catabolism;
Purine conversions
fig|6666666.229938.peg.1195 CDS AP013044.1 1412855 1411383 -2 - 1473 FIG00898772: hypothetical protein - none -
fig|6666666.229938.peg.1196 CDS AP013044.1 1413796 1412897 -1 - 900 tRNA dimethylallyltransferase (EC 2.5.1.75) tRNA modification Bacteria;
tRNA processing
fig|6666666.229938.peg.1197 CDS AP013044.1 1414366 1413803 -1 - 564 FIG00897033: hypothetical protein - none -
fig|6666666.229938.peg.1198 CDS AP013044.1 1415169 1414387 -3 - 783 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) Llipid A biosynthesis cluster
fig|6666666.229938.peg.1199 CDS AP013044.1 1416558 1415173 -3 - 1386 N-acetylglucosamine deacetylase (EC 3.5.1.-) / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59) Llipid A biosynthesis cluster
fig|6666666.229938.peg.1200 CDS AP013044.1 1417608 1416571 -3 - 1038 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191) - none -
fig|6666666.229938.peg.1201 CDS AP013044.1 1418534 1417782 -2 - 753 hypothetical protein - none -
fig|6666666.229938.peg.1202 CDS AP013044.1 1419458 1418628 -2 - 831 Orotidine 5@1-phosphate decarboxylase (EC 4.1.1.23) De Novo Pyrimidine Synthesis
fig|6666666.229938.peg.1203 CDS AP013044.1 1420623 1419511 -3 - 1113 Peptide chain release factor 1 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.229938.peg.1204 CDS AP013044.1 1421844 1420678 -3 - 1167 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) De Novo Purine Biosynthesis
fig|6666666.229938.peg.1205 CDS AP013044.1 1422578 1421841 -2 - 738 Hemagglutinin - none -
fig|6666666.229938.peg.1206 CDS AP013044.1 1423557 1422586 -3 - 972 Hemagglutinin - none -
fig|6666666.229938.peg.1207 CDS AP013044.1 1423727 1424929 2 + 1203 putative DNA methylase - none -
fig|6666666.229938.peg.1208 CDS AP013044.1 1425315 1425127 -3 - 189 hypothetical protein - none -
fig|6666666.229938.peg.1209 CDS AP013044.1 1425431 1427509 2 + 2079 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) Biogenesis of c-type cytochromes;
Periplasmic disulfide interchange
fig|6666666.229938.peg.1210 CDS AP013044.1 1427512 1428297 1 + 786 Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8) Nucleoside triphosphate pyrophosphohydrolase MazG
fig|6666666.229938.peg.1211 CDS AP013044.1 1428546 1431203 3 + 2658 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229938.peg.1212 CDS AP013044.1 1431429 1434257 3 + 2829 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.1213 CDS AP013044.1 1434263 1435900 2 + 1638 hypothetical protein - none -
fig|6666666.229938.peg.1214 CDS AP013044.1 1435965 1437485 3 + 1521 hypothetical protein - none -
fig|6666666.229938.peg.1215 CDS AP013044.1 1437557 1438816 2 + 1260 hypothetical protein - none -
fig|6666666.229938.peg.1216 CDS AP013044.1 1439111 1438959 -2 - 153 hypothetical protein - none -
fig|6666666.229938.peg.1217 CDS AP013044.1 1439227 1440858 1 + 1632 Alpha-galactosidase (EC 3.2.1.22) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization
fig|6666666.229938.peg.1218 CDS AP013044.1 1441037 1441942 2 + 906 Phage integrase - none -
fig|6666666.229938.peg.1219 CDS AP013044.1 1442977 1441958 -1 - 1020 putative dolichol-P-glucose synthetase - none -
fig|6666666.229938.peg.1220 CDS AP013044.1 1443024 1443968 3 + 945 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) ECSIG4-SIG7;
RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229938.peg.1221 CDS AP013044.1 1443973 1444920 1 + 948 Magnesium and cobalt transport protein CorA Magnesium transport
fig|6666666.229938.peg.1222 CDS AP013044.1 1446554 1444974 -2 - 1581 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein - none -
fig|6666666.229938.peg.1223 CDS AP013044.1 1446678 1447424 3 + 747 Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Cobalamin synthesis
fig|6666666.229938.peg.1224 CDS AP013044.1 1448597 1447470 -2 - 1128 N-acetylglucosamine related transporter, NagX Chitin and N-acetylglucosamine utilization
fig|6666666.229938.peg.1225 CDS AP013044.1 1449915 1448599 -3 - 1317 hypothetical protein - none -
fig|6666666.229938.peg.1226 CDS AP013044.1 1451573 1450008 -2 - 1566 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1227 CDS AP013044.1 1455055 1451585 -1 - 3471 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.229938.peg.1228 CDS AP013044.1 1455610 1455918 1 + 309 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.1229 CDS AP013044.1 1455932 1457011 2 + 1080 putative anti-sigma factor - none -
fig|6666666.229938.peg.1230 CDS AP013044.1 1457860 1457000 -1 - 861 Glycosyl transferase, group 2 family protein - none -
fig|6666666.229938.peg.1231 CDS AP013044.1 1458321 1457941 -3 - 381 Putative sugar translocase in surface polysaccharides biosynthesis - none -
fig|6666666.229938.peg.1232 CDS AP013044.1 1459429 1458398 -1 - 1032 hypothetical protein - none -
fig|6666666.229938.peg.1233 CDS AP013044.1 1460760 1459426 -3 - 1335 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) D-Galacturonate and D-Glucuronate Utilization;
Xylose utilization
fig|6666666.229938.peg.1234 CDS AP013044.1 1462421 1460877 -2 - 1545 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1235 CDS AP013044.1 1465631 1462443 -2 - 3189 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.229938.peg.1236 CDS AP013044.1 1466844 1466248 -3 - 597 hypothetical protein - none -
fig|6666666.229938.peg.1237 CDS AP013044.1 1467540 1466851 -3 - 690 hypothetical protein - none -
fig|6666666.229938.peg.1238 CDS AP013044.1 1469118 1467565 -3 - 1554 hypothetical protein - none -
fig|6666666.229938.peg.1239 CDS AP013044.1 1472310 1469143 -3 - 3168 outer membrane protein Omp121 - none -
fig|6666666.229938.peg.1240 CDS AP013044.1 1472634 1473737 3 + 1104 GTP-binding and nucleic acid-binding protein YchF Universal GTPases
fig|6666666.229938.peg.1241 CDS AP013044.1 1473788 1474528 2 + 741 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229938.peg.1242 CDS AP013044.1 1474979 1476589 2 + 1611 forsythia cell detaching factor protein - none -
fig|6666666.229938.peg.1243 CDS AP013044.1 1477037 1477849 2 + 813 papain cysteine protease family protein - none -
fig|6666666.229938.peg.1244 CDS AP013044.1 1477961 1478134 2 + 174 hypothetical protein - none -
fig|6666666.229938.peg.1245 CDS AP013044.1 1478838 1480148 3 + 1311 Arylsulfatase regulator - none -
fig|6666666.229938.peg.1246 CDS AP013044.1 1480188 1482506 3 + 2319 putative TonB-dependent receptor - none -
fig|6666666.229938.peg.1247 CDS AP013044.1 1482466 1482609 1 + 144 hypothetical protein - none -
fig|6666666.229938.peg.1248 CDS AP013044.1 1483491 1484795 3 + 1305 Arylsulfatase regulator (Fe-S oxidoreductase) - none -
fig|6666666.229938.peg.1249 CDS AP013044.1 1484773 1487196 1 + 2424 TonB-dependent receptor, putative - none -
fig|6666666.229938.peg.1250 CDS AP013044.1 1487211 1489415 3 + 2205 ABC transporter ATP-binding protein - none -
fig|6666666.229938.peg.1251 CDS AP013044.1 1489418 1489885 2 + 468 hypothetical protein - none -
fig|6666666.229938.peg.1252 CDS AP013044.1 1490706 1489960 -3 - 747 UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) Llipid A biosynthesis cluster
fig|6666666.229938.peg.1253 CDS AP013044.1 1491041 1490724 -2 - 318 PaaD-like protein (DUF59) involved in Fe-S cluster assembly Iron-sulfur cluster assembly
fig|6666666.229938.peg.1254 CDS AP013044.1 1491814 1491107 -1 - 708 DNA repair protein RadC Bacterial cell division cluster;
DNA repair, bacterial
fig|6666666.229938.peg.1255 CDS AP013044.1 1492422 1491859 -3 - 564 Translation elongation factor P Translation elongation factors bacterial
fig|6666666.229938.peg.1256 CDS AP013044.1 1493552 1493079 -2 - 474 hypothetical protein - none -
fig|6666666.229938.peg.1257 CDS AP013044.1 1494621 1493557 -3 - 1065 putative DNA mismatch repair protein - none -
fig|6666666.229938.peg.1258 CDS AP013044.1 1494941 1495210 2 + 270 Heat shock protein 60 family co-chaperone GroES GroEL GroES
fig|6666666.229938.peg.1259 CDS AP013044.1 1495259 1496893 2 + 1635 Heat shock protein 60 family chaperone GroEL GroEL GroES
fig|6666666.229938.peg.1260 CDS AP013044.1 1497672 1496983 -3 - 690 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy Biotin biosynthesis Experimental
fig|6666666.229938.peg.1261 CDS AP013044.1 1498168 1497653 -1 - 516 Putative regulatory protein - none -
fig|6666666.229938.peg.1262 CDS AP013044.1 1499007 1498153 -3 - 855 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 A Gammaproteobacteria Cluster Relating to Translation;
CBSS-216600.3.peg.802;
Translation termination factors bacterial
fig|6666666.229938.peg.1263 CDS AP013044.1 1499069 1500142 2 + 1074 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229938.peg.1264 CDS AP013044.1 1500293 1501612 2 + 1320 hypothetical protein - none -
fig|6666666.229938.peg.1265 CDS AP013044.1 1501682 1502401 2 + 720 hypothetical protein - none -
fig|6666666.229938.peg.1266 CDS AP013044.1 1502423 1503163 2 + 741 Undecaprenyl diphosphate synthase (EC 2.5.1.31) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Isoprenoinds for Quinones;
Polyprenyl Diphosphate Biosynthesis
fig|6666666.229938.peg.1267 CDS AP013044.1 1503176 1505878 2 + 2703 Outer membrane protein assembly factor YaeT precursor Llipid A biosynthesis cluster
fig|6666666.229938.peg.1268 CDS AP013044.1 1506017 1506478 2 + 462 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229938.peg.1269 CDS AP013044.1 1506543 1507037 3 + 495 Outer membrane protein H precursor Llipid A biosynthesis cluster;
Periplasmic Stress Response
fig|6666666.229938.peg.1270 CDS AP013044.1 1507121 1507948 2 + 828 Glutamate racemase (EC 5.1.1.3) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229938.peg.1271 CDS AP013044.1 1507958 1508647 2 + 690 D-alanyl-D-alanine dipeptidase (EC 3.4.13.22) - none -
fig|6666666.229938.peg.1272 CDS AP013044.1 1509056 1508655 -2 - 402 hypothetical protein - none -
fig|6666666.229938.peg.1273 CDS AP013044.1 1509827 1509072 -2 - 756 Zinc ABC transporter, ATP-binding protein ZnuC - none -
fig|6666666.229938.peg.1274 CDS AP013044.1 1511921 1509843 -2 - 2079 Lipoprotein releasing system transmembrane protein LolC Lipoprotein sorting system
fig|6666666.229938.peg.1275 CDS AP013044.1 1512264 1511929 -3 - 336 Ribosome-binding factor A CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial
fig|6666666.229938.peg.1276 CDS AP013044.1 1513274 1512480 -2 - 795 Probable secreted protein - none -
fig|6666666.229938.peg.1277 CDS AP013044.1 1514990 1513449 -2 - 1542 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1278 CDS AP013044.1 1518407 1515003 -2 - 3405 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.1279 CDS AP013044.1 1519652 1518669 -2 - 984 putative anti-sigma factor - none -
fig|6666666.229938.peg.1280 CDS AP013044.1 1520331 1519762 -3 - 570 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.1281 CDS AP013044.1 1521058 1520429 -1 - 630 O-methyltransferase family protein [C1] - none -
fig|6666666.229938.peg.1282 CDS AP013044.1 1522522 1521077 -1 - 1446 Pyruvate kinase (EC 2.7.1.40) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229938.peg.1283 CDS AP013044.1 1522938 1522519 -3 - 420 3-dehydroquinate dehydratase II (EC 4.2.1.10) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Quinate degradation
fig|6666666.229938.peg.1284 CDS AP013044.1 1523137 1522979 -1 - 159 hypothetical protein - none -
fig|6666666.229938.peg.1285 CDS AP013044.1 1524261 1523197 -3 - 1065 bi-domain oxidoreductase - none -
fig|6666666.229938.peg.1286 CDS AP013044.1 1525280 1524258 -2 - 1023 heme biosynthesis protein (NirJ) related protein - none -
fig|6666666.229938.peg.1287 CDS AP013044.1 1525915 1526550 1 + 636 Methyltransferase type 11 - none -
fig|6666666.229938.peg.1288 CDS AP013044.1 1526613 1527086 3 + 474 Free methionine-(R)-sulfoxide reductase, contains GAF domain - none -
fig|6666666.229938.peg.1289 CDS AP013044.1 1527201 1528628 3 + 1428 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) tRNA nucleotidyltransferase
fig|6666666.229938.peg.1290 CDS AP013044.1 1530836 1528617 -2 - 2220 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I Stringent Response, (p)ppGpp metabolism
fig|6666666.229938.peg.1291 CDS AP013044.1 1531571 1530921 -2 - 651 hydrolase, haloacid dehalogenase-like family - none -
fig|6666666.229938.peg.1292 CDS AP013044.1 1532228 1532067 -2 - 162 hypothetical protein - none -
fig|6666666.229938.peg.1293 CDS AP013044.1 1532676 1534088 3 + 1413 Putative pyrogenic exotoxin B - none -
fig|6666666.229938.peg.1294 CDS AP013044.1 1534238 1534690 2 + 453 hypothetical protein - none -
fig|6666666.229938.peg.1295 CDS AP013044.1 1535267 1535599 2 + 333 hypothetical protein - none -
fig|6666666.229938.peg.1296 CDS AP013044.1 1536360 1537820 3 + 1461 4-hydroxybutanoyl-CoA dehydratase (EC 4.2.1.-) / Vinylacetyl-CoA Delta-isomerase (EC 5.3.3.3) - none -
fig|6666666.229938.peg.1297 CDS AP013044.1 1537825 1538142 1 + 318 NifU-related protein - none -
fig|6666666.229938.peg.1298 CDS AP013044.1 1538145 1539437 3 + 1293 4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-) - none -
fig|6666666.229938.peg.1299 CDS AP013044.1 1539470 1540585 2 + 1116 Alcohol dehydrogenase (EC 1.1.1.1) 5-FCL-like protein;
Fermentations: Mixed acid;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229938.peg.1300 CDS AP013044.1 1540598 1541956 2 + 1359 Succinate-semialdehyde dehydrogenase, CoA-dependent - none -
fig|6666666.229938.peg.1301 CDS AP013044.1 1541982 1543130 3 + 1149 Butyryl-CoA dehydrogenase (EC 1.3.99.2) - none -
fig|6666666.229938.peg.1302 CDS AP013044.1 1543137 1543919 3 + 783 Electron transfer flavoprotein, beta subunit - none -
fig|6666666.229938.peg.1303 CDS AP013044.1 1543941 1544948 3 + 1008 Electron transfer flavoprotein, alpha subunit - none -
fig|6666666.229938.peg.1304 CDS AP013044.1 1545516 1545040 -3 - 477 thioesterase family protein - none -
fig|6666666.229938.peg.1305 CDS AP013044.1 1545616 1546365 1 + 750 Lipopolysaccharide ABC transporter, ATP-binding protein LptB - none -
fig|6666666.229938.peg.1306 CDS AP013044.1 1546479 1546345 -3 - 135 hypothetical protein - none -
fig|6666666.229938.peg.1307 CDS AP013044.1 1548688 1546862 -1 - 1827 DNA mismatch repair protein MutL DNA repair, bacterial MutL-MutS system
fig|6666666.229938.peg.1308 CDS AP013044.1 1548996 1548685 -3 - 312 hypothetical protein - none -
fig|6666666.229938.peg.1309 CDS AP013044.1 1550616 1549012 -3 - 1605 hypothetical protein - none -
fig|6666666.229938.peg.1310 CDS AP013044.1 1551929 1550613 -2 - 1317 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) ECSIG4-SIG7;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229938.peg.1311 CDS AP013044.1 1552839 1551988 -3 - 852 FIG00898614: hypothetical protein - none -
fig|6666666.229938.peg.1312 CDS AP013044.1 1554472 1552874 -1 - 1599 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) ECSIG4-SIG7;
Peptidyl-prolyl cis-trans isomerase;
Periplasmic Stress Response
fig|6666666.229938.peg.1313 CDS AP013044.1 1556870 1554510 -2 - 2361 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229938.peg.1314 CDS AP013044.1 1558126 1556897 -1 - 1230 ATP-dependent Clp protease ATP-binding subunit ClpX Proteolysis in bacteria, ATP-dependent
fig|6666666.229938.peg.1315 CDS AP013044.1 1558809 1558144 -3 - 666 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Proteolysis in bacteria, ATP-dependent;
cAMP signaling in bacteria
fig|6666666.229938.peg.1316 CDS AP013044.1 1560184 1558823 -1 - 1362 Cell division trigger factor (EC 5.2.1.8) Bacterial Cell Division
fig|6666666.229938.peg.1317 CDS AP013044.1 1560495 1560740 3 + 246 RNA binding protein - none -
fig|6666666.229938.peg.1318 CDS AP013044.1 1560832 1561710 1 + 879 Abortive infection protein - none -
fig|6666666.229938.peg.1319 CDS AP013044.1 1562171 1561728 -2 - 444 hypothetical protein - none -
fig|6666666.229938.peg.1320 CDS AP013044.1 1562597 1562208 -2 - 390 hypothetical protein - none -
fig|6666666.229938.peg.1321 CDS AP013044.1 1563231 1562650 -3 - 582 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.1322 CDS AP013044.1 1563353 1565371 2 + 2019 Outer membrane vitamin B12 receptor BtuB - none -
fig|6666666.229938.peg.1323 CDS AP013044.1 1566138 1568231 3 + 2094 ATP-dependent DNA helicase RecG (EC 3.6.1.-) - none -
fig|6666666.229938.peg.1324 CDS AP013044.1 1569514 1568270 -1 - 1245 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP Phosphoglycerate mutase protein family
fig|6666666.229938.peg.1325 CDS AP013044.1 1570341 1569511 -3 - 831 hypothetical protein - none -
fig|6666666.229938.peg.1326 CDS AP013044.1 1572115 1570331 -1 - 1785 FIG00898077: hypothetical protein - none -
fig|6666666.229938.peg.1327 CDS AP013044.1 1572586 1572152 -1 - 435 Deoxyuridine 5@1-triphosphate nucleotidohydrolase (EC 3.6.1.23) Housecleaning nucleoside triphosphate pyrophosphatases;
Nudix proteins (nucleoside triphosphate hydrolases)
fig|6666666.229938.peg.1328 CDS AP013044.1 1573433 1572708 -2 - 726 FIG002003: Protein YdjA - none -
fig|6666666.229938.peg.1329 CDS AP013044.1 1574598 1573504 -3 - 1095 endonuclease/exonuclease/phosphatase family precursor (38.1 kD) (5F605) - none -
fig|6666666.229938.peg.1330 CDS AP013044.1 1576128 1574620 -3 - 1509 hypothetical protein - none -
fig|6666666.229938.peg.1331 CDS AP013044.1 1579271 1576140 -2 - 3132 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1332 CDS AP013044.1 1580570 1579554 -2 - 1017 putative anti-sigma factor - none -
fig|6666666.229938.peg.1333 CDS AP013044.1 1580693 1581268 2 + 576 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.1334 CDS AP013044.1 1582003 1581263 -1 - 741 mannose-1-phosphate guanyltransferase - none -
fig|6666666.229938.peg.1335 CDS AP013044.1 1583442 1582009 -3 - 1434 COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases - none -
fig|6666666.229938.peg.1336 CDS AP013044.1 1583492 1583605 2 + 114 hypothetical protein - none -
fig|6666666.229938.peg.1337 CDS AP013044.1 1583641 1585701 1 + 2061 Dipeptidyl-peptidase III (EC 3.4.14.4) - none -
fig|6666666.229938.peg.1338 CDS AP013044.1 1585746 1586228 3 + 483 transcriptional regulator, Fur family Oxidative stress
fig|6666666.229938.peg.1339 CDS AP013044.1 1586263 1587534 1 + 1272 Adenylosuccinate synthetase (EC 6.3.4.4) Purine conversions
fig|6666666.229938.peg.1340 CDS AP013044.1 1587645 1588331 3 + 687 FIG00897182: hypothetical protein - none -
fig|6666666.229938.peg.1341 CDS AP013044.1 1588335 1589696 3 + 1362 Histidyl-tRNA synthetase (EC 6.1.1.21) tRNA aminoacylation, His
fig|6666666.229938.peg.1342 CDS AP013044.1 1591623 1589881 -3 - 1743 Alkaline serine protease, subtilase family (EC 3.4.21.-) - none -
fig|6666666.229938.peg.1343 CDS AP013044.1 1592430 1591639 -3 - 792 hypothetical protein - none -
fig|6666666.229938.peg.1344 CDS AP013044.1 1593256 1592435 -1 - 822 hypothetical protein - none -
fig|6666666.229938.peg.1345 CDS AP013044.1 1594204 1593266 -1 - 939 putative fiber protein - none -
fig|6666666.229938.peg.1346 CDS AP013044.1 1594970 1594770 -2 - 201 hypothetical protein - none -
fig|6666666.229938.peg.1347 CDS AP013044.1 1594845 1596944 3 + 2100 DNA topoisomerase III (EC 5.99.1.2) DNA processing cluster;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229938.peg.1348 CDS AP013044.1 1597445 1596975 -2 - 471 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.1349 CDS AP013044.1 1598114 1597620 -2 - 495 Cytidine deaminase (EC 3.5.4.5) tRNA modification Bacteria
fig|6666666.229938.peg.1350 CDS AP013044.1 1598354 1598524 2 + 171 hypothetical protein - none -
fig|6666666.229938.peg.1351 CDS AP013044.1 1598538 1599827 3 + 1290 S-adenosylmethionine synthetase (EC 2.5.1.6) Methionine Degradation
fig|6666666.229938.peg.1352 CDS AP013044.1 1600581 1600928 3 + 348 SSU ribosomal protein S12p (S23e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosomal protein S12p Asp methylthiotransferase;
Ribosome SSU bacterial
fig|6666666.229938.peg.1353 CDS AP013044.1 1601012 1601569 2 + 558 SSU ribosomal protein S7p (S5e) Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Ribosome SSU bacterial
fig|6666666.229938.peg.1354 CDS AP013044.1 1601569 1603716 1 + 2148 Translation elongation factor G Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factor G family;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229938.peg.1355 CDS AP013044.1 1603758 1604039 3 + 282 SSU ribosomal protein S10p (S20e) Ribosome SSU bacterial
fig|6666666.229938.peg.1356 CDS AP013044.1 1604059 1604676 1 + 618 LSU ribosomal protein L3p (L3e) Ribosome LSU bacterial
fig|6666666.229938.peg.1357 CDS AP013044.1 1604681 1605310 2 + 630 LSU ribosomal protein L4p (L1e) Ribosome LSU bacterial
fig|6666666.229938.peg.1358 CDS AP013044.1 1605327 1605620 3 + 294 LSU ribosomal protein L23p (L23Ae) Ribosome LSU bacterial
fig|6666666.229938.peg.1359 CDS AP013044.1 1605627 1606451 3 + 825 LSU ribosomal protein L2p (L8e) Ribosome LSU bacterial
fig|6666666.229938.peg.1360 CDS AP013044.1 1606471 1606737 1 + 267 SSU ribosomal protein S19p (S15e) Ribosome SSU bacterial
fig|6666666.229938.peg.1361 CDS AP013044.1 1606760 1607191 2 + 432 LSU ribosomal protein L22p (L17e) Ribosome LSU bacterial
fig|6666666.229938.peg.1362 CDS AP013044.1 1607198 1607971 2 + 774 SSU ribosomal protein S3p (S3e) Ribosome SSU bacterial
fig|6666666.229938.peg.1363 CDS AP013044.1 1607994 1608428 3 + 435 LSU ribosomal protein L16p (L10e) Ribosome LSU bacterial
fig|6666666.229938.peg.1364 CDS AP013044.1 1608434 1608631 2 + 198 LSU ribosomal protein L29p (L35e) Ribosome LSU bacterial
fig|6666666.229938.peg.1365 CDS AP013044.1 1608634 1608903 1 + 270 SSU ribosomal protein S17p (S11e) Ribosome SSU bacterial
fig|6666666.229938.peg.1366 CDS AP013044.1 1608905 1609270 2 + 366 LSU ribosomal protein L14p (L23e) Ribosome LSU bacterial
fig|6666666.229938.peg.1367 CDS AP013044.1 1609290 1609607 3 + 318 LSU ribosomal protein L24p (L26e) Ribosome LSU bacterial
fig|6666666.229938.peg.1368 CDS AP013044.1 1609604 1610164 2 + 561 LSU ribosomal protein L5p (L11e) Ribosome LSU bacterial
fig|6666666.229938.peg.1369 CDS AP013044.1 1610168 1610437 2 + 270 SSU ribosomal protein S14p (S29e) @ SSU ribosomal protein S14p (S29e), zinc-independent Ribosome SSU bacterial;
Ribosome SSU bacterial
fig|6666666.229938.peg.1370 CDS AP013044.1 1610541 1610903 3 + 363 SSU ribosomal protein S8p (S15Ae) Ribosome SSU bacterial
fig|6666666.229938.peg.1371 CDS AP013044.1 1610989 1611474 1 + 486 LSU ribosomal protein L6p (L9e) Ribosome LSU bacterial
fig|6666666.229938.peg.1372 CDS AP013044.1 1611499 1611843 1 + 345 LSU ribosomal protein L18p (L5e) Ribosome LSU bacterial
fig|6666666.229938.peg.1373 CDS AP013044.1 1611849 1612364 3 + 516 SSU ribosomal protein S5p (S2e) Ribosome SSU bacterial
fig|6666666.229938.peg.1374 CDS AP013044.1 1612382 1612558 2 + 177 LSU ribosomal protein L30p (L7e) Ribosome LSU bacterial
fig|6666666.229938.peg.1375 CDS AP013044.1 1612611 1613081 3 + 471 LSU ribosomal protein L15p (L27Ae) Ribosome LSU bacterial
fig|6666666.229938.peg.1376 CDS AP013044.1 1613084 1614424 2 + 1341 Preprotein translocase secY subunit (TC 3.A.5.1.1) - none -
fig|6666666.229938.peg.1377 CDS AP013044.1 1614427 1615209 1 + 783 Methionine aminopeptidase (EC 3.4.11.18) CBSS-312309.3.peg.1965;
Translation termination factors bacterial
fig|6666666.229938.peg.1378 CDS AP013044.1 1615213 1615431 1 + 219 Translation initiation factor 1 Translation initiation factors bacterial
fig|6666666.229938.peg.1379 CDS AP013044.1 1615457 1615573 2 + 117 LSU ribosomal protein L36p Ribosome LSU bacterial
fig|6666666.229938.peg.1380 CDS AP013044.1 1615609 1615989 1 + 381 SSU ribosomal protein S13p (S18e) Ribosome SSU bacterial
fig|6666666.229938.peg.1381 CDS AP013044.1 1615999 1616388 1 + 390 SSU ribosomal protein S11p (S14e) Ribosome SSU bacterial
fig|6666666.229938.peg.1382 CDS AP013044.1 1616503 1617108 1 + 606 SSU ribosomal protein S4p (S9e) Ribosome SSU bacterial
fig|6666666.229938.peg.1383 CDS AP013044.1 1617116 1618108 2 + 993 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) RNA polymerase bacterial
fig|6666666.229938.peg.1384 CDS AP013044.1 1618115 1618594 2 + 480 LSU ribosomal protein L17p Ribosome LSU bacterial
fig|6666666.229938.peg.1385 CDS AP013044.1 1619504 1618731 -2 - 774 Methionine ABC transporter ATP-binding protein Methionine Degradation
fig|6666666.229938.peg.1386 CDS AP013044.1 1620247 1619504 -1 - 744 ABC-type transport system involved in resistance to organic solvents, permease component - none -
fig|6666666.229938.peg.1387 CDS AP013044.1 1620702 1620562 -3 - 141 hypothetical protein - none -
fig|6666666.229938.peg.1388 CDS AP013044.1 1621285 1620710 -1 - 576 FIG00898490: hypothetical protein - none -
fig|6666666.229938.peg.1389 CDS AP013044.1 1622652 1621414 -3 - 1239 Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent Heat shock dnaK gene cluster extended
fig|6666666.229938.peg.1390 CDS AP013044.1 1622734 1624890 1 + 2157 Translation elongation factor G-related protein Translation elongation factor G family;
Translation elongation factors bacterial
fig|6666666.229938.peg.1391 CDS AP013044.1 1625293 1628943 1 + 3651 hemolysin-type calcium-binding region protein - none -
fig|6666666.229938.peg.1392 CDS AP013044.1 1630375 1629092 -1 - 1284 Amino acid permease family protein - none -
fig|6666666.229938.peg.1393 CDS AP013044.1 1631252 1630386 -2 - 867 hypothetical protein - none -
fig|6666666.229938.peg.1394 CDS AP013044.1 1632040 1631294 -1 - 747 hypothetical protein - none -
fig|6666666.229938.peg.1395 CDS AP013044.1 1632849 1632040 -3 - 810 hypothetical protein - none -
fig|6666666.229938.peg.1396 CDS AP013044.1 1634110 1632875 -1 - 1236 FIG00405513: hypothetical protein - none -
fig|6666666.229938.peg.1397 CDS AP013044.1 1636982 1634124 -2 - 2859 putative outer membrane receptor - none -
fig|6666666.229938.peg.1398 CDS AP013044.1 1637203 1638087 1 + 885 UPF0028 protein YchK Broadly distributed proteins not in subsystems
fig|6666666.229938.peg.1399 CDS AP013044.1 1638096 1639799 3 + 1704 Alpha-amylase (EC 3.2.1.1) Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.1400 CDS AP013044.1 1639901 1640845 2 + 945 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) A Gammaproteobacteria Cluster Relating to Translation;
De Novo Purine Biosynthesis;
Pentose phosphate pathway
fig|6666666.229938.peg.1401 CDS AP013044.1 1640934 1641275 3 + 342 hypothetical protein - none -
fig|6666666.229938.peg.1402 CDS AP013044.1 1642633 1641296 -1 - 1338 tRNA-specific 2-thiouridylase MnmA RNA methylation
fig|6666666.229938.peg.1403 CDS AP013044.1 1642791 1643408 3 + 618 transcriptional regulator, tetR family - none -
fig|6666666.229938.peg.1404 CDS AP013044.1 1643621 1645969 2 + 2349 Predicted exporter of the RND superfamily - none -
fig|6666666.229938.peg.1405 CDS AP013044.1 1646070 1648409 3 + 2340 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229938.peg.1406 CDS AP013044.1 1648474 1649688 1 + 1215 conserved hypothetical lipoprotein - none -
fig|6666666.229938.peg.1407 CDS AP013044.1 1649926 1650066 1 + 141 hypothetical protein - none -
fig|6666666.229938.peg.1408 CDS AP013044.1 1650050 1650781 2 + 732 Bll4887 protein - none -
fig|6666666.229938.peg.1409 CDS AP013044.1 1650820 1650942 1 + 123 hypothetical protein - none -
fig|6666666.229938.peg.1410 CDS AP013044.1 1650955 1652400 1 + 1446 Probable dipeptidase (EC 3.4.-.-) - none -
fig|6666666.229938.peg.1411 CDS AP013044.1 1652648 1653376 2 + 729 FIG002003: Protein YdjA - none -
fig|6666666.229938.peg.1412 CDS AP013044.1 1653416 1654204 2 + 789 FIG00935715: hypothetical protein - none -
fig|6666666.229938.peg.1413 CDS AP013044.1 1654670 1654885 2 + 216 hypothetical protein - none -
fig|6666666.229938.peg.1414 CDS AP013044.1 1654854 1656119 3 + 1266 FIG00936125: hypothetical protein - none -
fig|6666666.229938.peg.1415 CDS AP013044.1 1656316 1656705 1 + 390 hypothetical protein - none -
fig|6666666.229938.peg.1416 CDS AP013044.1 1656710 1657273 2 + 564 FIG00939884: hypothetical protein - none -
fig|6666666.229938.peg.1417 CDS AP013044.1 1657614 1659959 3 + 2346 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229938.peg.1418 CDS AP013044.1 1660070 1661239 2 + 1170 conserved hypothetical lipoprotein - none -
fig|6666666.229938.peg.1419 CDS AP013044.1 1661359 1662180 1 + 822 Metal transporter, ZIP family - none -
fig|6666666.229938.peg.1420 CDS AP013044.1 1662298 1662873 1 + 576 hypothetical protein - none -
fig|6666666.229938.peg.1421 CDS AP013044.1 1662904 1663695 1 + 792 hypothetical protein - none -
fig|6666666.229938.peg.1422 CDS AP013044.1 1663711 1664331 1 + 621 probable methyltransferase - none -
fig|6666666.229938.peg.1423 CDS AP013044.1 1664411 1665064 2 + 654 methlytransferase, UbiE/COQ5 family - none -
fig|6666666.229938.peg.1424 CDS AP013044.1 1665142 1665957 1 + 816 hypothetical protein - none -
fig|6666666.229938.peg.1425 CDS AP013044.1 1666054 1666821 1 + 768 METHYLTRANSFERASE - none -
fig|6666666.229938.peg.1426 CDS AP013044.1 1666868 1667425 2 + 558 Putative membrane protein - none -
fig|6666666.229938.peg.1427 CDS AP013044.1 1667442 1667837 3 + 396 hypothetical protein - none -
fig|6666666.229938.peg.1428 CDS AP013044.1 1668025 1668153 1 + 129 hypothetical protein - none -
fig|6666666.229938.peg.1429 CDS AP013044.1 1668159 1669910 3 + 1752 ABC transporter ATP-binding protein - none -
fig|6666666.229938.peg.1430 CDS AP013044.1 1670352 1669987 -3 - 366 Conserved protein - none -
fig|6666666.229938.peg.1431 CDS AP013044.1 1670440 1672170 1 + 1731 ABC transporter, ATP-binding protein, putative - none -
fig|6666666.229938.peg.1432 CDS AP013044.1 1672242 1673168 3 + 927 Glutaminase (EC 3.5.1.2) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229938.peg.1433 CDS AP013044.1 1673335 1674024 1 + 690 hypothetical protein - none -
fig|6666666.229938.peg.1434 CDS AP013044.1 1674131 1675120 2 + 990 Cobalt-zinc-cadmium resistance protein CzcD Cobalt-zinc-cadmium resistance
fig|6666666.229938.peg.1435 CDS AP013044.1 1675391 1675260 -2 - 132 hypothetical protein - none -
fig|6666666.229938.peg.1436 CDS AP013044.1 1675615 1675502 -1 - 114 hypothetical protein - none -
fig|6666666.229938.peg.1437 CDS AP013044.1 1675635 1676609 3 + 975 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants;
Riboflavin, FMN and FAD metabolism in plants;
riboflavin to FAD;
riboflavin to FAD
fig|6666666.229938.peg.1438 CDS AP013044.1 1676631 1677704 3 + 1074 Acetylornithine deacetylase (EC 3.5.1.16) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.229938.peg.1439 CDS AP013044.1 1677698 1678948 2 + 1251 Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids - none -
fig|6666666.229938.peg.1440 CDS AP013044.1 1679629 1679009 -1 - 621 Thiamin pyrophosphokinase (EC 2.7.6.2) Thiamin biosynthesis
fig|6666666.229938.peg.1441 CDS AP013044.1 1679771 1680883 2 + 1113 Protein containing cell adhesion domain - none -
fig|6666666.229938.peg.1442 CDS AP013044.1 1680952 1682574 1 + 1623 Protein containing cell adhesion domain - none -
fig|6666666.229938.peg.1443 CDS AP013044.1 1684075 1682747 -1 - 1329 Putative arylsulfatase regulatory protein - none -
fig|6666666.229938.peg.1444 CDS AP013044.1 1684225 1684914 1 + 690 Succinate dehydrogenase cytochrome b subunit Succinate dehydrogenase
fig|6666666.229938.peg.1445 CDS AP013044.1 1684956 1686896 3 + 1941 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Succinate dehydrogenase
fig|6666666.229938.peg.1446 CDS AP013044.1 1686928 1687647 1 + 720 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 5-FCL-like protein;
Succinate dehydrogenase
fig|6666666.229938.peg.1447 CDS AP013044.1 1687827 1689617 3 + 1791 Arginyl-tRNA synthetase (EC 6.1.1.19) tRNA aminoacylation, Arg
fig|6666666.229938.peg.1448 CDS AP013044.1 1692018 1689676 -3 - 2343 DNA topoisomerase I (EC 5.99.1.2) CBSS-272943.3.peg.1367;
Conserved gene cluster associated with Met-tRNA formyltransferase;
DNA topoisomerases, Type I, ATP-independent
fig|6666666.229938.peg.1449 CDS AP013044.1 1692059 1692187 2 + 129 hypothetical protein - none -
fig|6666666.229938.peg.1450 CDS AP013044.1 1692211 1694847 1 + 2637 Valyl-tRNA synthetase (EC 6.1.1.9) tRNA aminoacylation, Val
fig|6666666.229938.peg.1451 CDS AP013044.1 1694865 1695932 3 + 1068 hypothetical protein - none -
fig|6666666.229938.peg.1452 CDS AP013044.1 1696388 1696795 2 + 408 hypothetical protein - none -
fig|6666666.229938.peg.1453 CDS AP013044.1 1697110 1697280 1 + 171 hypothetical protein - none -
fig|6666666.229938.peg.1454 CDS AP013044.1 1697332 1700871 1 + 3540 hypothetical protein - none -
fig|6666666.229938.peg.1455 CDS AP013044.1 1701532 1701041 -1 - 492 hypothetical protein - none -
fig|6666666.229938.peg.1456 CDS AP013044.1 1701503 1705063 2 + 3561 hypothetical protein - none -
fig|6666666.229938.peg.1457 CDS AP013044.1 1705337 1706272 2 + 936 COG1242: Predicted Fe-S oxidoreductase - none -
fig|6666666.229938.peg.1458 CDS AP013044.1 1706302 1707960 1 + 1659 hypothetical protein - none -
fig|6666666.229938.peg.1459 CDS AP013044.1 1708800 1710968 3 + 2169 Dipeptidyl peptidase IV - none -
fig|6666666.229938.peg.1460 CDS AP013044.1 1710968 1711819 2 + 852 Lipoate synthase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229938.peg.1461 CDS AP013044.1 1711869 1713077 3 + 1209 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) Isoprenoid Biosynthesis;
Isoprenoid Biosynthesis: Interconversions
fig|6666666.229938.peg.1462 CDS AP013044.1 1713579 1713055 -3 - 525 FIG00937838: hypothetical protein - none -
fig|6666666.229938.peg.1463 CDS AP013044.1 1713889 1713743 -1 - 147 hypothetical protein - none -
fig|6666666.229938.peg.1464 CDS AP013044.1 1714422 1713886 -3 - 537 hypothetical protein - none -
fig|6666666.229938.peg.1465 CDS AP013044.1 1715605 1714523 -1 - 1083 FIG00899400: hypothetical protein - none -
fig|6666666.229938.peg.1466 CDS AP013044.1 1717131 1715938 -3 - 1194 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229938.peg.1467 CDS AP013044.1 1718376 1717165 -3 - 1212 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229938.peg.1468 CDS AP013044.1 1720177 1718354 -1 - 1824 membrane protein, putative - none -
fig|6666666.229938.peg.1469 CDS AP013044.1 1720182 1720328 3 + 147 hypothetical protein - none -
fig|6666666.229938.peg.1470 CDS AP013044.1 1720708 1720325 -1 - 384 hypothetical protein - none -
fig|6666666.229938.peg.1471 CDS AP013044.1 1720688 1720816 2 + 129 hypothetical protein - none -
fig|6666666.229938.peg.1472 CDS AP013044.1 1720979 1721431 2 + 453 FIG000325: clustered with transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229938.peg.1473 CDS AP013044.1 1721467 1722825 1 + 1359 Transcription termination protein NusA NusA-TFII Cluster;
Transcription factors bacterial
fig|6666666.229938.peg.1474 CDS AP013044.1 1722854 1725811 2 + 2958 Translation initiation factor 2 CBSS-138119.3.peg.2719;
NusA-TFII Cluster;
Translation initiation factors bacterial;
Universal GTPases
fig|6666666.229938.peg.1475 CDS AP013044.1 1725824 1726321 2 + 498 hypothetical protein - none -
fig|6666666.229938.peg.1476 CDS AP013044.1 1726323 1727780 3 + 1458 Iron-sulfur cluster assembly protein SufB Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.229938.peg.1477 CDS AP013044.1 1727873 1728631 2 + 759 Iron-sulfur cluster assembly ATPase protein SufC Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.229938.peg.1478 CDS AP013044.1 1728641 1730017 2 + 1377 Iron-sulfur cluster assembly protein SufD Iron-sulfur cluster assembly;
tRNA modification Bacteria
fig|6666666.229938.peg.1479 CDS AP013044.1 1730115 1730588 3 + 474 hypothetical protein - none -
fig|6666666.229938.peg.1480 CDS AP013044.1 1731614 1730595 -2 - 1020 membrane protein, putative - none -
fig|6666666.229938.peg.1481 CDS AP013044.1 1732447 1731674 -1 - 774 Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229938.peg.1482 CDS AP013044.1 1733530 1732460 -1 - 1071 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) / Chorismate mutase I (EC 5.4.99.5) Chorismate Synthesis;
Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate);
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229938.peg.1483 CDS AP013044.1 1734743 1733565 -2 - 1179 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Phenylalanine and Tyrosine Branches from Chorismate;
Threonine and Homoserine Biosynthesis
fig|6666666.229938.peg.1484 CDS AP013044.1 1735590 1734748 -3 - 843 Prephenate dehydratase (EC 4.2.1.51) Chorismate Synthesis;
Phenylalanine and Tyrosine Branches from Chorismate
fig|6666666.229938.peg.1485 CDS AP013044.1 1736667 1735885 -3 - 783 3-oxoacyl-[acyl-carrier protein] reductase paralog (EC 1.1.1.100) - none -
fig|6666666.229938.peg.1486 CDS AP013044.1 1737170 1736811 -2 - 360 Small heat shock protein - none -
fig|6666666.229938.peg.1487 CDS AP013044.1 1737828 1737622 -3 - 207 hypothetical protein - none -
fig|6666666.229938.peg.1488 CDS AP013044.1 1737990 1739192 3 + 1203 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily Alanine biosynthesis;
Iron-sulfur cluster assembly;
mnm5U34 biosynthesis bacteria;
tRNA modification Bacteria
fig|6666666.229938.peg.1489 CDS AP013044.1 1739309 1741006 2 + 1698 hypothetical protein - none -
fig|6666666.229938.peg.1490 CDS AP013044.1 1741202 1741375 2 + 174 PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene - none -
fig|6666666.229938.peg.1491 CDS AP013044.1 1741377 1741979 3 + 603 Ribonuclease HII (EC 3.1.26.4) Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribonuclease H
fig|6666666.229938.peg.1492 CDS AP013044.1 1742410 1741982 -1 - 429 Sulfur acceptor protein SufE for iron-sulfur cluster assembly Iron-sulfur cluster assembly
fig|6666666.229938.peg.1493 CDS AP013044.1 1743424 1742423 -1 - 1002 Aminopeptidase Y (Arg, Lys, Leu preference) (EC 3.4.11.15) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229938.peg.1494 CDS AP013044.1 1745218 1743437 -1 - 1782 Membrane dipeptidase precursor (EC 3.4.13.19) - none -
fig|6666666.229938.peg.1495 CDS AP013044.1 1747254 1745296 -3 - 1959 DNA gyrase subunit B (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229938.peg.1496 CDS AP013044.1 1749669 1747483 -3 - 2187 ABC transporter ATP-binding protein - none -
fig|6666666.229938.peg.1497 CDS AP013044.1 1751059 1749674 -1 - 1386 putative hemolysin secretion protein - none -
fig|6666666.229938.peg.1498 CDS AP013044.1 1751723 1751049 -2 - 675 putative glycosyltransferase - none -
fig|6666666.229938.peg.1499 CDS AP013044.1 1752873 1751713 -3 - 1161 Putative glycosyltransferase - none -
fig|6666666.229938.peg.1500 CDS AP013044.1 1753704 1752970 -3 - 735 hypothetical protein - none -
fig|6666666.229938.peg.1501 CDS AP013044.1 1755128 1754250 -2 - 879 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.229938.peg.1502 CDS AP013044.1 1756396 1755125 -1 - 1272 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.229938.peg.1503 CDS AP013044.1 1757342 1756383 -2 - 960 hypothetical protein - none -
fig|6666666.229938.peg.1504 CDS AP013044.1 1758243 1758118 -3 - 126 Putative glycosyltransferase - none -
fig|6666666.229938.peg.1505 CDS AP013044.1 1759994 1758246 -2 - 1749 hypothetical protein - none -
fig|6666666.229938.peg.1506 CDS AP013044.1 1762543 1760711 -1 - 1833 Succinoglycan biosynthesis protein - none -
fig|6666666.229938.peg.1507 CDS AP013044.1 1763068 1762814 -1 - 255 SSU ribosomal protein S20p Ribosome SSU bacterial
fig|6666666.229938.peg.1508 CDS AP013044.1 1763336 1764499 2 + 1164 putative anti-sigma factor - none -
fig|6666666.229938.peg.1509 CDS AP013044.1 1764536 1767826 2 + 3291 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.229938.peg.1510 CDS AP013044.1 1767889 1769586 1 + 1698 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1511 CDS AP013044.1 1769737 1773321 1 + 3585 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1512 CDS AP013044.1 1773405 1774844 3 + 1440 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1513 CDS AP013044.1 1774868 1776010 2 + 1143 Thiol:disulfide interchange protein - none -
fig|6666666.229938.peg.1514 CDS AP013044.1 1776681 1776334 -3 - 348 transcriptional regulator, Fur family Oxidative stress
fig|6666666.229938.peg.1515 CDS AP013044.1 1777219 1776905 -1 - 315 Thioredoxin CBSS-315749.4.peg.3658
fig|6666666.229938.peg.1516 CDS AP013044.1 1781034 1777249 -3 - 3786 DNA polymerase III alpha subunit (EC 2.7.7.7) - none -
fig|6666666.229938.peg.1517 CDS AP013044.1 1781182 1781802 1 + 621 hypothetical protein - none -
fig|6666666.229938.peg.1518 CDS AP013044.1 1781895 1782992 3 + 1098 hypothetical protein - none -
fig|6666666.229938.peg.1519 CDS AP013044.1 1783057 1783521 1 + 465 Methylglyoxal synthase (EC 4.2.3.3) Methylglyoxal Metabolism
fig|6666666.229938.peg.1520 CDS AP013044.1 1784364 1783534 -3 - 831 TPR repeat - none -
fig|6666666.229938.peg.1521 CDS AP013044.1 1784555 1785160 2 + 606 SSU ribosomal protein S16p Ribosome SSU bacterial
fig|6666666.229938.peg.1522 CDS AP013044.1 1785732 1785277 -3 - 456 Thioredoxin CBSS-315749.4.peg.3658
fig|6666666.229938.peg.1523 CDS AP013044.1 1785868 1787049 1 + 1182 SAM-dependent methyltransferases - none -
fig|6666666.229938.peg.1524 CDS AP013044.1 1788946 1787033 -1 - 1914 ATP-dependent DNA helicase, RecQ family - none -
fig|6666666.229938.peg.1525 CDS AP013044.1 1790677 1788953 -1 - 1725 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DNA Repair Base Excision;
DNA repair, bacterial RecFOR pathway
fig|6666666.229938.peg.1526 CDS AP013044.1 1790944 1790750 -1 - 195 hypothetical protein - none -
fig|6666666.229938.peg.1527 CDS AP013044.1 1791393 1790908 -3 - 486 probable membrane protein NMA1128 - none -
fig|6666666.229938.peg.1528 CDS AP013044.1 1792425 1791448 -3 - 978 Methionyl-tRNA formyltransferase (EC 2.1.2.9) Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation initiation factors bacterial
fig|6666666.229938.peg.1529 CDS AP013044.1 1794976 1792916 -1 - 2061 Chaperone protein HtpG Protein chaperones
fig|6666666.229938.peg.1530 CDS AP013044.1 1795814 1795095 -2 - 720 ATP-dependent Clp protease ATP-binding subunit ClpA Proteolysis in bacteria, ATP-dependent;
Ribosome recycling related cluster
fig|6666666.229938.peg.1531 CDS AP013044.1 1797660 1795798 -3 - 1863 ATP-dependent Clp protease ATP-binding subunit ClpA Proteolysis in bacteria, ATP-dependent;
Ribosome recycling related cluster
fig|6666666.229938.peg.1532 CDS AP013044.1 1799078 1797807 -2 - 1272 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.229938.peg.1533 CDS AP013044.1 1800220 1799069 -1 - 1152 L-serine dehydratase (EC 4.3.1.17) Glycine and Serine Utilization
fig|6666666.229938.peg.1534 CDS AP013044.1 1800356 1801378 2 + 1023 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229938.peg.1535 CDS AP013044.1 1801421 1802074 2 + 654 Endonuclease III (EC 4.2.99.18) DNA Repair Base Excision
fig|6666666.229938.peg.1536 CDS AP013044.1 1802183 1805011 2 + 2829 Probable zinc protease pqqL (EC 3.4.99.-) - none -
fig|6666666.229938.peg.1537 CDS AP013044.1 1806689 1805487 -2 - 1203 putative DNA methylase - none -
fig|6666666.229938.peg.1538 CDS AP013044.1 1806777 1806977 3 + 201 hypothetical protein - none -
fig|6666666.229938.peg.1539 CDS AP013044.1 1807091 1808485 2 + 1395 IS1478 transposase - none -
fig|6666666.229938.peg.1540 CDS AP013044.1 1808509 1808700 1 + 192 hypothetical protein - none -
fig|6666666.229938.peg.1541 CDS AP013044.1 1808697 1809692 3 + 996 protein transglucosylase - none -
fig|6666666.229938.peg.1542 CDS AP013044.1 1810116 1811117 3 + 1002 hypothetical protein - none -
fig|6666666.229938.peg.1543 CDS AP013044.1 1812497 1811289 -2 - 1209 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.1544 CDS AP013044.1 1812507 1812644 3 + 138 hypothetical protein - none -
fig|6666666.229938.peg.1545 CDS AP013044.1 1813104 1812739 -3 - 366 Transcriptional regulator, MarR family - none -
fig|6666666.229938.peg.1546 CDS AP013044.1 1813568 1813110 -2 - 459 Thioredoxin CBSS-315749.4.peg.3658
fig|6666666.229938.peg.1547 CDS AP013044.1 1813777 1813577 -1 - 201 hypothetical protein - none -
fig|6666666.229938.peg.1548 CDS AP013044.1 1816237 1813793 -1 - 2445 NADH dehydrogenase (EC 1.6.99.3) Respiratory dehydrogenases 1
fig|6666666.229938.peg.1549 CDS AP013044.1 1816608 1816892 3 + 285 hypothetical protein - none -
fig|6666666.229938.peg.1550 CDS AP013044.1 1816984 1817331 1 + 348 hypothetical protein - none -
fig|6666666.229938.peg.1551 CDS AP013044.1 1817347 1818060 1 + 714 hypothetical protein - none -
fig|6666666.229938.peg.1552 CDS AP013044.1 1818166 1819023 1 + 858 cell surface protein - none -
fig|6666666.229938.peg.1553 CDS AP013044.1 1819422 1819571 3 + 150 hypothetical protein - none -
fig|6666666.229938.peg.1554 CDS AP013044.1 1820150 1820686 2 + 537 Shikimate kinase I (EC 2.7.1.71) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229938.peg.1555 CDS AP013044.1 1820746 1822605 1 + 1860 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) - none -
fig|6666666.229938.peg.1556 CDS AP013044.1 1822610 1823623 2 + 1014 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) - none -
fig|6666666.229938.peg.1557 CDS AP013044.1 1823936 1824814 2 + 879 Cell division protein FtsX Bacterial Cell Division
fig|6666666.229938.peg.1558 CDS AP013044.1 1824839 1825093 2 + 255 hypothetical protein - none -
fig|6666666.229938.peg.1559 CDS AP013044.1 1825090 1825902 1 + 813 Undecaprenyl-diphosphatase (EC 3.6.1.27) - none -
fig|6666666.229938.peg.1560 CDS AP013044.1 1825914 1826633 3 + 720 tRNA pseudouridine synthase B (EC 4.2.1.70) CBSS-138119.3.peg.2719;
RNA pseudouridine syntheses;
Riboflavin, FMN and FAD metabolism in plants;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229938.peg.1561 CDS AP013044.1 1826648 1827697 2 + 1050 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229938.peg.1562 CDS AP013044.1 1827694 1828173 1 + 480 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229938.peg.1563 CDS AP013044.1 1829809 1828196 -1 - 1614 Aspartate ammonia-lyase (EC 4.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229938.peg.1564 CDS AP013044.1 1830001 1830114 1 + 114 hypothetical protein - none -
fig|6666666.229938.peg.1565 CDS AP013044.1 1832699 1830348 -2 - 2352 Ferrichrome-iron receptor - none -
fig|6666666.229938.peg.1566 CDS AP013044.1 1833133 1834383 1 + 1251 Fucose permease - none -
fig|6666666.229938.peg.1567 CDS AP013044.1 1834630 1834977 1 + 348 hypothetical protein - none -
fig|6666666.229938.peg.1568 CDS AP013044.1 1835050 1835790 1 + 741 FIG00403293: hypothetical protein - none -
fig|6666666.229938.peg.1569 CDS AP013044.1 1836474 1835791 -3 - 684 hypothetical protein - none -
fig|6666666.229938.peg.1570 CDS AP013044.1 1836550 1837731 1 + 1182 Cystathionine beta-lyase, Bsu PatB (EC 4.4.1.8) - none -
fig|6666666.229938.peg.1571 CDS AP013044.1 1837824 1838351 3 + 528 RNA polymerase sigma-70 factor, ECF subfamily - none -
fig|6666666.229938.peg.1572 CDS AP013044.1 1838365 1838736 1 + 372 hypothetical protein - none -
fig|6666666.229938.peg.1573 CDS AP013044.1 1838887 1840692 1 + 1806 SSU ribosomal protein S1p Cell division-ribosomal stress proteins cluster;
Ribosome SSU bacterial
fig|6666666.229938.peg.1574 CDS AP013044.1 1840941 1841798 3 + 858 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) - none -
fig|6666666.229938.peg.1575 CDS AP013044.1 1843550 1841904 -2 - 1647 Hydroxylamine reductase (EC 1.7.-.-) Nitrosative stress
fig|6666666.229938.peg.1576 CDS AP013044.1 1843797 1843651 -3 - 147 hypothetical protein - none -
fig|6666666.229938.peg.1577 CDS AP013044.1 1845613 1843805 -1 - 1809 GTP-binding protein TypA/BipA Universal GTPases
fig|6666666.229938.peg.1578 CDS AP013044.1 1845763 1846032 1 + 270 SSU ribosomal protein S15p (S13e) Ribosome SSU bacterial
fig|6666666.229938.peg.1579 CDS AP013044.1 1848258 1846168 -3 - 2091 Lysine 2,3-aminomutase (EC 5.4.3.2) - none -
fig|6666666.229938.peg.1580 CDS AP013044.1 1848459 1848334 -3 - 126 hypothetical protein - none -
fig|6666666.229938.peg.1581 CDS AP013044.1 1848481 1849092 1 + 612 Hcp transcriptional regulator HcpR (Crp/Fnr family) Nitrosative stress
fig|6666666.229938.peg.1582 CDS AP013044.1 1850926 1849772 -1 - 1155 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229938.peg.1583 CDS AP013044.1 1852503 1850953 -3 - 1551 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) Terminal cytochrome d ubiquinol oxidases;
Terminal cytochrome oxidases
fig|6666666.229938.peg.1584 CDS AP013044.1 1852648 1852526 -1 - 123 hypothetical protein - none -
fig|6666666.229938.peg.1585 CDS AP013044.1 1852891 1853481 1 + 591 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.1586 CDS AP013044.1 1853651 1854775 2 + 1125 putative anti-sigma factor - none -
fig|6666666.229938.peg.1587 CDS AP013044.1 1854932 1858330 2 + 3399 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.1588 CDS AP013044.1 1858348 1860243 1 + 1896 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1589 CDS AP013044.1 1860415 1861896 1 + 1482 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) - none -
fig|6666666.229938.peg.1590 CDS AP013044.1 1862000 1862878 2 + 879 Probable secreted glycosyl hydrolase - none -
fig|6666666.229938.peg.1591 CDS AP013044.1 1863685 1862978 -1 - 708 hypothetical protein - none -
fig|6666666.229938.peg.1592 CDS AP013044.1 1863757 1865094 1 + 1338 Peptidase, M16 family - none -
fig|6666666.229938.peg.1593 CDS AP013044.1 1866924 1865140 -3 - 1785 Chloride channel protein - none -
fig|6666666.229938.peg.1594 CDS AP013044.1 1868335 1866935 -1 - 1401 capsular polysaccharide biosynthesis protein Rhamnose containing glycans
fig|6666666.229938.peg.1595 CDS AP013044.1 1868919 1868335 -3 - 585 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229938.peg.1596 CDS AP013044.1 1869047 1868925 -2 - 123 hypothetical protein - none -
fig|6666666.229938.peg.1597 CDS AP013044.1 1870324 1869086 -1 - 1239 hypothetical protein - none -
fig|6666666.229938.peg.1598 CDS AP013044.1 1871207 1870395 -2 - 813 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization
fig|6666666.229938.peg.1599 CDS AP013044.1 1871774 1871229 -2 - 546 hypothetical protein - none -
fig|6666666.229938.peg.1600 CDS AP013044.1 1872966 1871788 -3 - 1179 Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26) - none -
fig|6666666.229938.peg.1601 CDS AP013044.1 1873850 1872996 -2 - 855 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) Lipoprotein Biosynthesis
fig|6666666.229938.peg.1602 CDS AP013044.1 1874828 1873932 -2 - 897 Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229938.peg.1603 CDS AP013044.1 1876943 1875810 -2 - 1134 Acetylornithine aminotransferase (EC 2.6.1.11) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.229938.peg.1604 CDS AP013044.1 1877950 1876976 -1 - 975 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.229938.peg.1605 CDS AP013044.1 1879194 1877947 -3 - 1248 Argininosuccinate synthase (EC 6.3.4.5) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.229938.peg.1606 CDS AP013044.1 1879867 1879217 -1 - 651 FIG00651573: hypothetical protein - none -
fig|6666666.229938.peg.1607 CDS AP013044.1 1880292 1879864 -3 - 429 Arginine pathway regulatory protein ArgR, repressor of arg regulon Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229938.peg.1608 CDS AP013044.1 1880613 1882334 3 + 1722 Tetratricopeptide repeat family protein - none -
fig|6666666.229938.peg.1609 CDS AP013044.1 1884214 1882910 -1 - 1305 Nucleoside permease NupG - none -
fig|6666666.229938.peg.1610 CDS AP013044.1 1884419 1885696 2 + 1278 BchE/P-methylase family protein - none -
fig|6666666.229938.peg.1611 CDS AP013044.1 1885770 1886168 3 + 399 hypothetical protein - none -
fig|6666666.229938.peg.1612 CDS AP013044.1 1886165 1887187 2 + 1023 FIG00655207: hypothetical protein - none -
fig|6666666.229938.peg.1613 CDS AP013044.1 1887184 1887945 1 + 762 ABC transporter, ATP-binding protein - none -
fig|6666666.229938.peg.1614 CDS AP013044.1 1887920 1889197 2 + 1278 ABC-type multidrug transport system, permease component - none -
fig|6666666.229938.peg.1615 CDS AP013044.1 1889263 1890465 1 + 1203 Na+/H+-dicarboxylate symporter - none -
fig|6666666.229938.peg.1616 CDS AP013044.1 1891706 1890573 -2 - 1134 Lipid-A-disaccharide synthase (EC 2.4.1.182) Llipid A biosynthesis cluster
fig|6666666.229938.peg.1617 CDS AP013044.1 1892483 1891713 -2 - 771 5-nucleotidase SurE (EC 3.1.3.5) Housecleaning nucleoside triphosphate pyrophosphatases;
Stationary phase repair cluster
fig|6666666.229938.peg.1618 CDS AP013044.1 1892589 1894022 3 + 1434 Cardiolipin synthetase (EC 2.7.8.-) Cardiolipin synthesis;
Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229938.peg.1619 CDS AP013044.1 1894551 1893994 -3 - 558 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) CBSS-226186.1.peg.3978;
CBSS-266117.6.peg.1260;
CBSS-269801.1.peg.1715;
RNA methylation
fig|6666666.229938.peg.1620 CDS AP013044.1 1895297 1894539 -2 - 759 FIG032012: hypothetical protein CBSS-226186.1.peg.3978
fig|6666666.229938.peg.1621 CDS AP013044.1 1896044 1895358 -2 - 687 FIG036016: hypothetical protein CBSS-226186.1.peg.3978
fig|6666666.229938.peg.1622 CDS AP013044.1 1896137 1897561 2 + 1425 RecD-like DNA helicase Atu2026 - none -
fig|6666666.229938.peg.1623 CDS AP013044.1 1897701 1897823 3 + 123 hypothetical protein - none -
fig|6666666.229938.peg.1624 CDS AP013044.1 1898052 1898690 3 + 639 hypothetical protein - none -
fig|6666666.229938.peg.1625 CDS AP013044.1 1898705 1899406 2 + 702 rRNA small subunit methyltransferase I 16S rRNA modification within P site of ribosome;
Heat shock dnaK gene cluster extended
fig|6666666.229938.peg.1626 CDS AP013044.1 1899458 1900294 2 + 837 lipoprotein, putative - none -
fig|6666666.229938.peg.1627 CDS AP013044.1 1900291 1900989 1 + 699 Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5@1-phosphoribitylamino)uracil phosphatase Riboflavin, FMN and FAD metabolism;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229938.peg.1628 CDS AP013044.1 1901133 1901291 3 + 159 hypothetical protein - none -
fig|6666666.229938.peg.1629 CDS AP013044.1 1901480 1901352 -2 - 129 hypothetical protein - none -
fig|6666666.229938.peg.1630 CDS AP013044.1 1901507 1903003 2 + 1497 Cobyric acid synthase (EC 6.3.5.10) Cobalamin synthesis
fig|6666666.229938.peg.1631 CDS AP013044.1 1903920 1902976 -3 - 945 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) Cobalamin synthesis
fig|6666666.229938.peg.1632 CDS AP013044.1 1904918 1903896 -2 - 1023 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Cobalamin synthesis
fig|6666666.229938.peg.1633 CDS AP013044.1 1905028 1905405 1 + 378 Bona fide RidA/YjgF/TdcF/RutC subgroup - none -
fig|6666666.229938.peg.1634 CDS AP013044.1 1905604 1906755 1 + 1152 hypothetical protein - none -
fig|6666666.229938.peg.1635 CDS AP013044.1 1906783 1907259 1 + 477 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229938.peg.1636 CDS AP013044.1 1908542 1907265 -2 - 1278 ATPase, AAA family - none -
fig|6666666.229938.peg.1637 CDS AP013044.1 1908729 1909556 3 + 828 TPR-repeat-containing protein - none -
fig|6666666.229938.peg.1638 CDS AP013044.1 1909693 1910913 1 + 1221 putative fiber protein - none -
fig|6666666.229938.peg.1639 CDS AP013044.1 1911523 1917567 1 + 6045 FIG00936030: hypothetical protein - none -
fig|6666666.229938.peg.1640 CDS AP013044.1 1917981 1917859 -3 - 123 hypothetical protein - none -
fig|6666666.229938.peg.1641 CDS AP013044.1 1918360 1920252 1 + 1893 FIG00936030: hypothetical protein - none -
fig|6666666.229938.peg.1642 CDS AP013044.1 1921321 1921656 1 + 336 hypothetical protein - none -
fig|6666666.229938.peg.1643 CDS AP013044.1 1921691 1922080 2 + 390 FIG00936030: hypothetical protein - none -
fig|6666666.229938.peg.1644 CDS AP013044.1 1922349 1922116 -3 - 234 Mobile element protein - none -
fig|6666666.229938.peg.1645 CDS AP013044.1 1922644 1922438 -1 - 207 hypothetical protein - none -
fig|6666666.229938.peg.1646 CDS AP013044.1 1923643 1924452 1 + 810 hypothetical protein - none -
fig|6666666.229938.peg.1647 CDS AP013044.1 1925178 1925759 3 + 582 hypothetical protein - none -
fig|6666666.229938.peg.1648 CDS AP013044.1 1925790 1926017 3 + 228 hypothetical protein - none -
fig|6666666.229938.peg.1649 CDS AP013044.1 1926017 1926457 2 + 441 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) tRNA modification Bacteria;
tRNA processing
fig|6666666.229938.peg.1650 CDS AP013044.1 1928078 1926468 -2 - 1611 Regulatory protein SusR Cellulosome
fig|6666666.229938.peg.1651 CDS AP013044.1 1929058 1928171 -1 - 888 protease, putative - none -
fig|6666666.229938.peg.1652 CDS AP013044.1 1929798 1929121 -3 - 678 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229938.peg.1653 CDS AP013044.1 1929828 1929977 3 + 150 hypothetical protein - none -
fig|6666666.229938.peg.1654 CDS AP013044.1 1929961 1932423 1 + 2463 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) tRNA aminoacylation, Phe
fig|6666666.229938.peg.1655 CDS AP013044.1 1932451 1933173 1 + 723 FIG000859: hypothetical protein YebC Riboflavin, FMN and FAD metabolism in plants;
RuvABC plus a hypothetical
fig|6666666.229938.peg.1656 CDS AP013044.1 1934411 1933614 -2 - 798 hypothetical protein - none -
fig|6666666.229938.peg.1657 CDS AP013044.1 1934887 1935792 1 + 906 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229938.peg.1658 CDS AP013044.1 1935798 1936520 3 + 723 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Queuosine-Archaeosine Biosynthesis
fig|6666666.229938.peg.1659 CDS AP013044.1 1936525 1937139 1 + 615 FIG00896812: hypothetical protein - none -
fig|6666666.229938.peg.1660 CDS AP013044.1 1937778 1937116 -3 - 663 TRNA/rRNA methyltransferase - none -
fig|6666666.229938.peg.1661 CDS AP013044.1 1939180 1937792 -1 - 1389 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucosamine mutase (EC 5.4.2.10) Bacterial checkpoint-control-related cluster;
Mannose Metabolism
fig|6666666.229938.peg.1662 CDS AP013044.1 1939463 1939780 2 + 318 LSU ribosomal protein L21p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229938.peg.1663 CDS AP013044.1 1939801 1940079 1 + 279 LSU ribosomal protein L27p CBSS-176279.3.peg.868;
Ribosome LSU bacterial
fig|6666666.229938.peg.1664 CDS AP013044.1 1940404 1940772 1 + 369 Lipoprotein spr precursor - none -
fig|6666666.229938.peg.1665 CDS AP013044.1 1940846 1942117 2 + 1272 Seryl-tRNA synthetase (EC 6.1.1.11) Glycine and Serine Utilization;
tRNA aminoacylation, Ser
fig|6666666.229938.peg.1666 CDS AP013044.1 1943358 1942231 -3 - 1128 Phosphoesterase (EC 3.1.-.-) - none -
fig|6666666.229938.peg.1667 CDS AP013044.1 1944859 1943765 -1 - 1095 filamentation induced by cAMP protein Fic - none -
fig|6666666.229938.peg.1668 CDS AP013044.1 1944983 1944840 -2 - 144 hypothetical protein - none -
fig|6666666.229938.peg.1669 CDS AP013044.1 1945865 1947076 2 + 1212 ATPase - none -
fig|6666666.229938.peg.1670 CDS AP013044.1 1947451 1948485 1 + 1035 Vitamin B12 ABC transporter, permease component BtuC - none -
fig|6666666.229938.peg.1671 CDS AP013044.1 1949732 1948524 -2 - 1209 FIG00896635: hypothetical protein - none -
fig|6666666.229938.peg.1672 CDS AP013044.1 1951695 1949716 -3 - 1980 FIG00896368: hypothetical protein - none -
fig|6666666.229938.peg.1673 CDS AP013044.1 1959277 1951829 -1 - 7449 FIG00897849: hypothetical protein - none -
fig|6666666.229938.peg.1674 CDS AP013044.1 1959867 1959277 -3 - 591 Holliday junction DNA helicase RuvA RuvABC plus a hypothetical
fig|6666666.229938.peg.1675 CDS AP013044.1 1960041 1960376 3 + 336 Translation initiation factor SUI1-related protein Translation initiation factors bacterial
fig|6666666.229938.peg.1676 CDS AP013044.1 1960370 1963594 2 + 3225 FIG003033: Helicase domain protein - none -
fig|6666666.229938.peg.1677 CDS AP013044.1 1963649 1964323 2 + 675 Phosphatidylserine decarboxylase (EC 4.1.1.65) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229938.peg.1678 CDS AP013044.1 1964328 1965071 3 + 744 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229938.peg.1679 CDS AP013044.1 1965187 1966068 1 + 882 Transcriptional regulator, AraC family - none -
fig|6666666.229938.peg.1680 CDS AP013044.1 1966111 1967346 1 + 1236 GTP-binding protein HflX Hfl operon;
Universal GTPases
fig|6666666.229938.peg.1681 CDS AP013044.1 1968881 1967466 -2 - 1416 hypothetical protein - none -
fig|6666666.229938.peg.1682 CDS AP013044.1 1969998 1968868 -3 - 1131 hypothetical protein - none -
fig|6666666.229938.peg.1683 CDS AP013044.1 1970428 1970303 -1 - 126 hypothetical protein - none -
fig|6666666.229938.peg.1684 CDS AP013044.1 1970613 1970732 3 + 120 hypothetical protein - none -
fig|6666666.229938.peg.1685 CDS AP013044.1 1972397 1971336 -2 - 1062 similar to (EMBL:AL117211) YPMT1.20C, Yersinia pestis CO-92 hypothetical protein from plasmid pMT1; similar to (EMBL:AF074611) Y1035, Yersinia pestis KIM5 hypothetical protein from plasmid pMT1; blastn and dotplot analyses suggest that an insertion event has taken place at this point as compared to Yersinia pestis pMT1 - none -
fig|6666666.229938.peg.1686 CDS AP013044.1 1973015 1972473 -2 - 543 LemA protein CBSS-393011.11.peg.386
fig|6666666.229938.peg.1687 CDS AP013044.1 1974998 1973169 -2 - 1830 Threonyl-tRNA synthetase - none -
fig|6666666.229938.peg.1688 CDS AP013044.1 1975219 1974998 -1 - 222 hypothetical protein - none -
fig|6666666.229938.peg.1689 CDS AP013044.1 1976791 1975355 -1 - 1437 5@1-nucleotidase (EC 3.1.3.5) Purine conversions
fig|6666666.229938.peg.1690 CDS AP013044.1 1978007 1976817 -2 - 1191 hypothetical protein - none -
fig|6666666.229938.peg.1691 CDS AP013044.1 1981543 1980137 -1 - 1407 Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats - none -
fig|6666666.229938.peg.1692 CDS AP013044.1 1982931 1982773 -3 - 159 hypothetical protein - none -
fig|6666666.229938.peg.1693 CDS AP013044.1 1982933 1983127 2 + 195 hypothetical protein - none -
fig|6666666.229938.peg.1694 CDS AP013044.1 1983195 1986149 3 + 2955 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229938.peg.1695 CDS AP013044.1 1988638 1986305 -1 - 2334 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229938.peg.1696 CDS AP013044.1 1989955 1988675 -1 - 1281 Serine hydroxymethyltransferase (EC 2.1.2.1) 5-FCL-like protein;
Glycine Biosynthesis;
Glycine and Serine Utilization;
Serine Biosynthesis
fig|6666666.229938.peg.1697 CDS AP013044.1 1991153 1990518 -2 - 636 Superoxide dismutase [Fe] (EC 1.15.1.1) Oxidative stress;
Protection from Reactive Oxygen Species
fig|6666666.229938.peg.1698 CDS AP013044.1 1991921 1991250 -2 - 672 DNA recombination and repair protein RecO DNA repair, bacterial RecFOR pathway;
Glycyl-tRNA synthetase containing cluster
fig|6666666.229938.peg.1699 CDS AP013044.1 1993101 1992100 -3 - 1002 hypothetical protein - none -
fig|6666666.229938.peg.1700 CDS AP013044.1 1993342 1993229 -1 - 114 hypothetical protein - none -
fig|6666666.229938.peg.1701 CDS AP013044.1 1993481 1993356 -2 - 126 hypothetical protein - none -
fig|6666666.229938.peg.1702 CDS AP013044.1 1993491 1994894 3 + 1404 Glutamyl-tRNA synthetase (EC 6.1.1.17) tRNA aminoacylation, Glu and Gln
fig|6666666.229938.peg.1703 CDS AP013044.1 1994894 1996126 2 + 1233 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] - none -
fig|6666666.229938.peg.1704 CDS AP013044.1 1997266 1996130 -1 - 1137 Capsule biosynthesis protein capA - none -
fig|6666666.229938.peg.1705 CDS AP013044.1 1997997 1997263 -3 - 735 N-acetylglutamate synthase (EC 2.3.1.1) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.229938.peg.1706 CDS AP013044.1 1997963 1998154 2 + 192 SSU ribosomal protein S21p Macromolecular synthesis operon;
Ribosome SSU bacterial
fig|6666666.229938.peg.1707 CDS AP013044.1 1998299 1999129 2 + 831 Integrase, site-specific recombinase - none -
fig|6666666.229938.peg.1708 CDS AP013044.1 1999141 1999440 1 + 300 Ribosome hibernation protein YhbH Ribosome activity modulation
fig|6666666.229938.peg.1709 CDS AP013044.1 1999857 2001044 3 + 1188 Translation elongation factor Tu Mycobacterium virulence operon involved in protein synthesis (SSU ribosomal proteins);
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229938.peg.1710 CDS AP013044.1 2001182 2001370 2 + 189 Preprotein translocase subunit SecE (TC 3.A.5.1.1) LSU ribosomal proteins cluster
fig|6666666.229938.peg.1711 CDS AP013044.1 2001382 2001924 1 + 543 Transcription antitermination protein NusG LSU ribosomal proteins cluster;
Transcription factors bacterial
fig|6666666.229938.peg.1712 CDS AP013044.1 2001986 2002432 2 + 447 LSU ribosomal protein L11p (L12e) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229938.peg.1713 CDS AP013044.1 2002447 2003142 1 + 696 LSU ribosomal protein L1p (L10Ae) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229938.peg.1714 CDS AP013044.1 2003165 2003692 2 + 528 LSU ribosomal protein L10p (P0) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229938.peg.1715 CDS AP013044.1 2003735 2004109 2 + 375 LSU ribosomal protein L7/L12 (P1/P2) LSU ribosomal proteins cluster;
Ribosome LSU bacterial
fig|6666666.229938.peg.1716 CDS AP013044.1 2004226 2008038 1 + 3813 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229938.peg.1717 CDS AP013044.1 2008067 2012344 2 + 4278 DNA-directed RNA polymerase beta@1 subunit (EC 2.7.7.6) Mycobacterium virulence operon involved in DNA transcription;
RNA polymerase bacterial
fig|6666666.229938.peg.1718 CDS AP013044.1 2012369 2013904 2 + 1536 ATPase component BioM of energizing module of biotin ECF transporter - none -
fig|6666666.229938.peg.1719 CDS AP013044.1 2014099 2014215 1 + 117 hypothetical protein - none -
fig|6666666.229938.peg.1720 CDS AP013044.1 2014299 2015444 3 + 1146 Isochorismate synthase (EC 5.4.4.2) @ Menaquinone-specific isochorismate synthase (EC 5.4.4.2) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.;
Menaquinone and Phylloquinone Biosynthesis
fig|6666666.229938.peg.1721 CDS AP013044.1 2015444 2017177 2 + 1734 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.229938.peg.1722 CDS AP013044.1 2017196 2018020 2 + 825 Naphthoate synthase (EC 4.1.3.36) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.229938.peg.1723 CDS AP013044.1 2018020 2019090 1 + 1071 O-succinylbenzoate synthase (EC 4.2.1.113) Menaquinone and Phylloquinone Biosynthesis;
Muconate lactonizing enzyme family
fig|6666666.229938.peg.1724 CDS AP013044.1 2019114 2020163 3 + 1050 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.229938.peg.1725 CDS AP013044.1 2020770 2020186 -3 - 585 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.1726 CDS AP013044.1 2021319 2022545 3 + 1227 Integrase - none -
fig|6666666.229938.peg.1727 CDS AP013044.1 2022594 2025224 3 + 2631 protein of unknown function DUF323 - none -
fig|6666666.229938.peg.1728 CDS AP013044.1 2025252 2025371 3 + 120 hypothetical protein - none -
fig|6666666.229938.peg.1729 CDS AP013044.1 2025448 2028120 1 + 2673 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229938.peg.1730 CDS AP013044.1 2028253 2029545 1 + 1293 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229938.peg.1731 CDS AP013044.1 2029563 2030711 3 + 1149 protein of unknown function DUF1016 - none -
fig|6666666.229938.peg.1732 CDS AP013044.1 2030662 2032089 1 + 1428 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229938.peg.1733 CDS AP013044.1 2032389 2032084 -3 - 306 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229938.peg.1734 CDS AP013044.1 2033813 2032419 -2 - 1395 IS1478 transposase - none -
fig|6666666.229938.peg.1735 CDS AP013044.1 2034060 2035229 3 + 1170 hypothetical protein - none -
fig|6666666.229938.peg.1736 CDS AP013044.1 2036288 2035368 -2 - 921 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) Restriction-Modification System;
Type I Restriction-Modification
fig|6666666.229938.peg.1737 CDS AP013044.1 2036750 2036980 2 + 231 hypothetical protein - none -
fig|6666666.229938.peg.1738 CDS AP013044.1 2037687 2037040 -3 - 648 FIG00936814: hypothetical protein - none -
fig|6666666.229938.peg.1739 CDS AP013044.1 2038313 2038495 2 + 183 hypothetical protein - none -
fig|6666666.229938.peg.1740 CDS AP013044.1 2038718 2038867 2 + 150 hypothetical protein - none -
fig|6666666.229938.peg.1741 CDS AP013044.1 2039288 2039070 -2 - 219 hypothetical protein - none -
fig|6666666.229938.peg.1742 CDS AP013044.1 2040196 2039306 -1 - 891 Mobile element protein - none -
fig|6666666.229938.peg.1743 CDS AP013044.1 2040313 2041158 1 + 846 Msl8587 protein - none -
fig|6666666.229938.peg.1744 CDS AP013044.1 2042453 2041509 -2 - 945 Hydrolases of the alpha/beta superfamily - none -
fig|6666666.229938.peg.1745 CDS AP013044.1 2043318 2042485 -3 - 834 Endonuclease IV (EC 3.1.21.2) DNA repair, bacterial
fig|6666666.229938.peg.1746 CDS AP013044.1 2045313 2043337 -3 - 1977 hypothetical protein - none -
fig|6666666.229938.peg.1747 CDS AP013044.1 2046062 2045319 -2 - 744 Glycosyl transferase, group 2 family protein - none -
fig|6666666.229938.peg.1748 CDS AP013044.1 2046169 2049369 1 + 3201 Conserved domain protein - none -
fig|6666666.229938.peg.1749 CDS AP013044.1 2049345 2050877 3 + 1533 Conserved domain protein - none -
fig|6666666.229938.peg.1750 CDS AP013044.1 2050870 2053179 1 + 2310 FIG00896779: hypothetical protein - none -
fig|6666666.229938.peg.1751 CDS AP013044.1 2055763 2053268 -1 - 2496 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) Cellulosome
fig|6666666.229938.peg.1752 CDS AP013044.1 2056103 2056915 2 + 813 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.229938.peg.1753 CDS AP013044.1 2056912 2058342 1 + 1431 hypothetical protein - none -
fig|6666666.229938.peg.1754 CDS AP013044.1 2058296 2059597 2 + 1302 hypothetical protein - none -
fig|6666666.229938.peg.1755 CDS AP013044.1 2059587 2060402 3 + 816 Glycosyl transferase, family 2 - none -
fig|6666666.229938.peg.1756 CDS AP013044.1 2060372 2061661 2 + 1290 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.229938.peg.1757 CDS AP013044.1 2062009 2063352 1 + 1344 glycosyl transferase group 1 - none -
fig|6666666.229938.peg.1758 CDS AP013044.1 2064480 2063347 -3 - 1134 Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase (EC 2.4.1.-) Rhamnose containing glycans
fig|6666666.229938.peg.1759 CDS AP013044.1 2064970 2064497 -1 - 474 LSU m3Psi1915 methyltransferase RlmH RNA methylation;
Ribosome biogenesis bacterial;
tRNA modification Bacteria
fig|6666666.229938.peg.1760 CDS AP013044.1 2065289 2065540 2 + 252 hypothetical protein - none -
fig|6666666.229938.peg.1761 CDS AP013044.1 2065564 2066412 1 + 849 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) Mycobacterium virulence operon possibly involved in quinolinate biosynthesis;
NAD and NADP cofactor biosynthesis global
fig|6666666.229938.peg.1762 CDS AP013044.1 2066437 2067558 1 + 1122 hypothetical protein - none -
fig|6666666.229938.peg.1763 CDS AP013044.1 2067522 2069129 3 + 1608 hypothetical protein - none -
fig|6666666.229938.peg.1764 CDS AP013044.1 2069710 2069138 -1 - 573 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch
fig|6666666.229938.peg.1765 CDS AP013044.1 2070436 2069732 -1 - 705 Tetrapyrrole methylase family protein - none -
fig|6666666.229938.peg.1766 CDS AP013044.1 2070652 2070488 -1 - 165 hypothetical protein - none -
fig|6666666.229938.peg.1767 CDS AP013044.1 2073045 2070790 -3 - 2256 Chitin binding protein Chitin and N-acetylglucosamine utilization
fig|6666666.229938.peg.1768 CDS AP013044.1 2073627 2073478 -3 - 150 hypothetical protein - none -
fig|6666666.229938.peg.1769 CDS AP013044.1 2073793 2073665 -1 - 129 hypothetical protein - none -
fig|6666666.229938.peg.1770 CDS AP013044.1 2074565 2075734 2 + 1170 hypothetical protein - none -
fig|6666666.229938.peg.1771 CDS AP013044.1 2076155 2075931 -2 - 225 hypothetical protein - none -
fig|6666666.229938.peg.1772 CDS AP013044.1 2076442 2076555 1 + 114 hypothetical protein - none -
fig|6666666.229938.peg.1773 CDS AP013044.1 2076606 2078765 3 + 2160 putative helicase - none -
fig|6666666.229938.peg.1774 CDS AP013044.1 2079613 2080602 1 + 990 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.229938.peg.1775 CDS AP013044.1 2080631 2083291 2 + 2661 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.229938.peg.1776 CDS AP013044.1 2083592 2085127 2 + 1536 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) Potassium homeostasis
fig|6666666.229938.peg.1777 CDS AP013044.1 2085147 2085872 3 + 726 Transcriptional regulatory protein rprY - none -
fig|6666666.229938.peg.1778 CDS AP013044.1 2086690 2086040 -1 - 651 hypothetical protein - none -
fig|6666666.229938.peg.1779 CDS AP013044.1 2087523 2086825 -3 - 699 Putative predicted metal-dependent hydrolase Restriction-Modification System
fig|6666666.229938.peg.1780 CDS AP013044.1 2087880 2088419 3 + 540 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.1781 CDS AP013044.1 2088603 2089598 3 + 996 putative anti-sigma factor - none -
fig|6666666.229938.peg.1782 CDS AP013044.1 2089717 2093151 1 + 3435 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.229938.peg.1783 CDS AP013044.1 2093176 2094948 1 + 1773 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1784 CDS AP013044.1 2094989 2096248 2 + 1260 Glycosyltransferase (EC 2.4.1.-) - none -
fig|6666666.229938.peg.1785 CDS AP013044.1 2097083 2096403 -2 - 681 Oxidoreductase, short chain dehydrogenase/reductase family - none -
fig|6666666.229938.peg.1786 CDS AP013044.1 2097755 2098387 2 + 633 periplasmic serine protease - none -
fig|6666666.229938.peg.1787 CDS AP013044.1 2098398 2098604 3 + 207 hypothetical protein - none -
fig|6666666.229938.peg.1788 CDS AP013044.1 2098904 2100943 2 + 2040 Polyphosphate kinase (EC 2.7.4.1) Phosphate metabolism;
Polyphosphate;
Purine conversions
fig|6666666.229938.peg.1789 CDS AP013044.1 2102286 2100940 -3 - 1347 tRNA and rRNA cytosine-C5-methylases - none -
fig|6666666.229938.peg.1790 CDS AP013044.1 2104158 2102335 -3 - 1824 Lipoteichoic acid synthase LtaS Type IVb Polyglycerolphosphate lipoteichoic acid biosynthesis
fig|6666666.229938.peg.1791 CDS AP013044.1 2104216 2104896 1 + 681 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229938.peg.1792 CDS AP013044.1 2104915 2106003 1 + 1089 Chorismate synthase (EC 4.2.3.5) Chorismate Synthesis;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229938.peg.1793 CDS AP013044.1 2107413 2105980 -3 - 1434 Carboxyl-terminal protease - none -
fig|6666666.229938.peg.1794 CDS AP013044.1 2107790 2107548 -2 - 243 hypothetical protein - none -
fig|6666666.229938.peg.1795 CDS AP013044.1 2107915 2108955 1 + 1041 hypothetical protein - none -
fig|6666666.229938.peg.1796 CDS AP013044.1 2110317 2108998 -3 - 1320 Membrane-associated zinc metalloprotease - none -
fig|6666666.229938.peg.1797 CDS AP013044.1 2111571 2110417 -3 - 1155 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) CBSS-83331.1.peg.3039;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229938.peg.1798 CDS AP013044.1 2112456 2111578 -3 - 879 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.229938.peg.1799 CDS AP013044.1 2112988 2112461 -1 - 528 16S rRNA processing protein RimM Ribosome biogenesis bacterial
fig|6666666.229938.peg.1800 CDS AP013044.1 2113179 2113030 -3 - 150 hypothetical protein - none -
fig|6666666.229938.peg.1801 CDS AP013044.1 2113784 2113176 -2 - 609 FIG00649584: hypothetical protein - none -
fig|6666666.229938.peg.1802 CDS AP013044.1 2113998 2115539 3 + 1542 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) - none -
fig|6666666.229938.peg.1803 CDS AP013044.1 2115564 2117684 3 + 2121 Transcription accessory protein (S1 RNA-binding domain) Cell division-ribosomal stress proteins cluster;
Transcription factors bacterial
fig|6666666.229938.peg.1804 CDS AP013044.1 2117870 2117748 -2 - 123 hypothetical protein - none -
fig|6666666.229938.peg.1805 CDS AP013044.1 2119093 2117888 -1 - 1206 hypothetical protein - none -
fig|6666666.229938.peg.1806 CDS AP013044.1 2119316 2119885 2 + 570 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.1807 CDS AP013044.1 2119887 2120399 3 + 513 Aldose 1-epimerase (EC 5.1.3.3) Lactose and Galactose Uptake and Utilization;
Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.1808 CDS AP013044.1 2120446 2121753 1 + 1308 Predicted glucose transporter in maltodextrin utilization gene cluster Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.1809 CDS AP013044.1 2121829 2122461 1 + 633 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229938.peg.1810 CDS AP013044.1 2122443 2122967 3 + 525 Galactokinase (EC 2.7.1.6) Lactose and Galactose Uptake and Utilization
fig|6666666.229938.peg.1811 CDS AP013044.1 2123109 2124500 3 + 1392 FIG00898204: hypothetical protein - none -
fig|6666666.229938.peg.1812 CDS AP013044.1 2125324 2124506 -1 - 819 COG0488: ATPase components of ABC transporters with duplicated ATPase domains - none -
fig|6666666.229938.peg.1813 CDS AP013044.1 2126396 2125311 -2 - 1086 COG0488: ATPase components of ABC transporters with duplicated ATPase domains - none -
fig|6666666.229938.peg.1814 CDS AP013044.1 2127918 2126431 -3 - 1488 Inosine-5@1-monophosphate dehydrogenase (EC 1.1.1.205) Purine conversions;
Purine salvage cluster
fig|6666666.229938.peg.1815 CDS AP013044.1 2130588 2128138 -3 - 2451 Ferrous iron transport protein B - none -
fig|6666666.229938.peg.1816 CDS AP013044.1 2131111 2130704 -1 - 408 hypothetical protein - none -
fig|6666666.229938.peg.1817 CDS AP013044.1 2131473 2132570 3 + 1098 putative two-component system sensor protein histidine kinase - none -
fig|6666666.229938.peg.1818 CDS AP013044.1 2132589 2133338 3 + 750 Two-component system response regulator - none -
fig|6666666.229938.peg.1819 CDS AP013044.1 2133979 2134092 1 + 114 hypothetical protein - none -
fig|6666666.229938.peg.1820 CDS AP013044.1 2134667 2134885 2 + 219 hypothetical protein - none -
fig|6666666.229938.peg.1821 CDS AP013044.1 2134897 2135166 1 + 270 hypothetical protein - none -
fig|6666666.229938.peg.1822 CDS AP013044.1 2135192 2135782 2 + 591 hypothetical protein - none -
fig|6666666.229938.peg.1823 CDS AP013044.1 2135800 2136237 1 + 438 FIG00937340: hypothetical protein - none -
fig|6666666.229938.peg.1824 CDS AP013044.1 2136274 2136399 1 + 126 FIG00937820: hypothetical protein - none -
fig|6666666.229938.peg.1825 CDS AP013044.1 2136413 2136667 2 + 255 FIG00935801: hypothetical protein - none -
fig|6666666.229938.peg.1826 CDS AP013044.1 2136654 2136902 3 + 249 FIG00935811: hypothetical protein - none -
fig|6666666.229938.peg.1827 CDS AP013044.1 2138426 2137530 -2 - 897 Carbohydrate kinase, PfkB - none -
fig|6666666.229938.peg.1828 CDS AP013044.1 2139037 2138444 -1 - 594 hypothetical protein - none -
fig|6666666.229938.peg.1829 CDS AP013044.1 2140211 2139183 -2 - 1029 Mobile element protein - none -
fig|6666666.229938.peg.1830 CDS AP013044.1 2141205 2140198 -3 - 1008 putative integrase/recombinase - none -
fig|6666666.229938.peg.1831 CDS AP013044.1 2142478 2141198 -1 - 1281 Mobile element protein - none -
fig|6666666.229938.peg.1832 CDS AP013044.1 2142768 2142562 -3 - 207 hypothetical protein - none -
fig|6666666.229938.peg.1833 CDS AP013044.1 2143571 2142765 -2 - 807 hypothetical protein - none -
fig|6666666.229938.peg.1834 CDS AP013044.1 2145107 2143827 -2 - 1281 Enolase (EC 4.2.1.11) Entner-Doudoroff Pathway;
Glycolysis and Gluconeogenesis
fig|6666666.229938.peg.1835 CDS AP013044.1 2145572 2145204 -2 - 369 hypothetical protein - none -
fig|6666666.229938.peg.1836 CDS AP013044.1 2146078 2145584 -1 - 495 Flavodoxin 1 Flavodoxin
fig|6666666.229938.peg.1837 CDS AP013044.1 2146682 2146356 -2 - 327 FIG00935708: hypothetical protein - none -
fig|6666666.229938.peg.1838 CDS AP013044.1 2147281 2146679 -1 - 603 hypothetical transporter PduT for various metalloporphyrins - none -
fig|6666666.229938.peg.1839 CDS AP013044.1 2147982 2147278 -3 - 705 FIG00402742: hypothetical protein - none -
fig|6666666.229938.peg.1840 CDS AP013044.1 2152369 2147984 -1 - 4386 CobN/magnesium chelatase family protein - none -
fig|6666666.229938.peg.1841 CDS AP013044.1 2154496 2152397 -1 - 2100 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229938.peg.1842 CDS AP013044.1 2156983 2154761 -1 - 2223 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229938.peg.1843 CDS AP013044.1 2157671 2157009 -2 - 663 hypothetical protein - none -
fig|6666666.229938.peg.1844 CDS AP013044.1 2159275 2157722 -1 - 1554 hypothetical protein - none -
fig|6666666.229938.peg.1845 CDS AP013044.1 2159658 2159494 -3 - 165 hypothetical protein - none -
fig|6666666.229938.peg.1846 CDS AP013044.1 2160119 2160292 2 + 174 hypothetical protein - none -
fig|6666666.229938.peg.1847 CDS AP013044.1 2160270 2162810 3 + 2541 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229938.peg.1848 CDS AP013044.1 2162845 2163897 1 + 1053 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229938.peg.1849 CDS AP013044.1 2164651 2165784 1 + 1134 hypothetical protein - none -
fig|6666666.229938.peg.1850 CDS AP013044.1 2165747 2165929 2 + 183 hypothetical protein - none -
fig|6666666.229938.peg.1851 CDS AP013044.1 2165935 2168562 1 + 2628 hypothetical protein - none -
fig|6666666.229938.peg.1852 CDS AP013044.1 2169840 2168566 -3 - 1275 alternate gene name: yzbB - none -
fig|6666666.229938.peg.1853 CDS AP013044.1 2169860 2170120 2 + 261 hypothetical protein - none -
fig|6666666.229938.peg.1854 CDS AP013044.1 2170270 2170767 1 + 498 LSU ribosomal protein L13p (L13Ae) Ribosome LSU bacterial
fig|6666666.229938.peg.1855 CDS AP013044.1 2170773 2171159 3 + 387 SSU ribosomal protein S9p (S16e) Ribosome SSU bacterial
fig|6666666.229938.peg.1856 CDS AP013044.1 2171301 2172161 3 + 861 SSU ribosomal protein S2p (SAe) CBSS-312309.3.peg.1965;
Ribosome SSU bacterial;
Ribosome recycling related cluster
fig|6666666.229938.peg.1857 CDS AP013044.1 2172179 2173003 2 + 825 Translation elongation factor Ts CBSS-312309.3.peg.1965;
Ribosome recycling related cluster;
Translation elongation factors bacterial
fig|6666666.229938.peg.1858 CDS AP013044.1 2173138 2174013 1 + 876 ABC transporter ATP-binding protein - none -
fig|6666666.229938.peg.1859 CDS AP013044.1 2174020 2174694 1 + 675 FIG00405701: hypothetical protein - none -
fig|6666666.229938.peg.1860 CDS AP013044.1 2174718 2175941 3 + 1224 hypothetical protein - none -
fig|6666666.229938.peg.1861 CDS AP013044.1 2175970 2176515 1 + 546 hypothetical protein - none -
fig|6666666.229938.peg.1862 CDS AP013044.1 2176518 2177087 3 + 570 hypothetical protein - none -
fig|6666666.229938.peg.1863 CDS AP013044.1 2177492 2177220 -2 - 273 hypothetical protein - none -
fig|6666666.229938.peg.1864 CDS AP013044.1 2178617 2177721 -2 - 897 hypothetical protein - none -
fig|6666666.229938.peg.1865 CDS AP013044.1 2178916 2178794 -1 - 123 hypothetical protein - none -
fig|6666666.229938.peg.1866 CDS AP013044.1 2180012 2179017 -2 - 996 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1867 CDS AP013044.1 2183245 2180168 -1 - 3078 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.229938.peg.1868 CDS AP013044.1 2186464 2183456 -1 - 3009 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) De Novo Pyrimidine Synthesis;
Macromolecular synthesis operon
fig|6666666.229938.peg.1869 CDS AP013044.1 2187237 2186509 -3 - 729 hypothetical protein - none -
fig|6666666.229938.peg.1870 CDS AP013044.1 2191070 2187225 -2 - 3846 ATP-dependent DNA helicase RecQ DNA repair, bacterial RecFOR pathway
fig|6666666.229938.peg.1871 CDS AP013044.1 2191270 2191112 -1 - 159 hypothetical protein - none -
fig|6666666.229938.peg.1872 CDS AP013044.1 2193547 2191286 -1 - 2262 POTASSIUM/PROTON ANTIPORTER ROSB Potassium homeostasis
fig|6666666.229938.peg.1873 CDS AP013044.1 2194772 2193645 -2 - 1128 hypothetical protein - none -
fig|6666666.229938.peg.1874 CDS AP013044.1 2194915 2196462 1 + 1548 NAD(P)HX epimerase / NAD(P)HX dehydratase YjeE;
YjeE
fig|6666666.229938.peg.1875 CDS AP013044.1 2196650 2196850 2 + 201 FIG00898802: hypothetical protein - none -
fig|6666666.229938.peg.1876 CDS AP013044.1 2196987 2197262 3 + 276 FIG034863: hypothetical protein CBSS-226186.1.peg.4416
fig|6666666.229938.peg.1877 CDS AP013044.1 2197265 2197570 2 + 306 Cell division ZapA family protein CBSS-226186.1.peg.4416
fig|6666666.229938.peg.1878 CDS AP013044.1 2197684 2199213 1 + 1530 2@1,3@1-cyclic-nucleotide 2@1-phosphodiesterase (EC 3.1.4.16) CBSS-226186.1.peg.4416;
Purine conversions
fig|6666666.229938.peg.1879 CDS AP013044.1 2199348 2200562 3 + 1215 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) NAD and NADP cofactor biosynthesis global;
Redox-dependent regulation of nucleus processes
fig|6666666.229938.peg.1880 CDS AP013044.1 2202178 2200559 -1 - 1620 ABC transporter ATP-binding protein uup - none -
fig|6666666.229938.peg.1881 CDS AP013044.1 2202486 2203160 3 + 675 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229938.peg.1882 CDS AP013044.1 2203174 2204322 1 + 1149 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229938.peg.1883 CDS AP013044.1 2204327 2204950 2 + 624 Recombination protein RecR DNA processing cluster;
DNA repair, bacterial RecFOR pathway
fig|6666666.229938.peg.1884 CDS AP013044.1 2204955 2206124 3 + 1170 Glycosyl transferase, group 2 family protein - none -
fig|6666666.229938.peg.1885 CDS AP013044.1 2206143 2206673 3 + 531 Spermidine N1-acetyltransferase (EC 2.3.1.57) Polyamine Metabolism
fig|6666666.229938.peg.1886 CDS AP013044.1 2206769 2206930 2 + 162 hypothetical protein - none -
fig|6666666.229938.peg.1887 CDS AP013044.1 2207017 2207991 1 + 975 Adenine-specific methyltransferase (EC 2.1.1.72) CBSS-257314.1.peg.752
fig|6666666.229938.peg.1888 CDS AP013044.1 2209018 2208884 -1 - 135 hypothetical protein - none -
fig|6666666.229938.peg.1889 CDS AP013044.1 2208992 2209687 2 + 696 Uracil-DNA glycosylase, family 1 DNA Repair Base Excision;
Uracil-DNA glycosylase
fig|6666666.229938.peg.1890 CDS AP013044.1 2212444 2209688 -1 - 2757 Organic solvent tolerance protein precursor ECSIG4-SIG7
fig|6666666.229938.peg.1891 CDS AP013044.1 2213045 2212503 -2 - 543 HDIG domain protein - none -
fig|6666666.229938.peg.1892 CDS AP013044.1 2213036 2214352 2 + 1317 alternate gene name: yzbB - none -
fig|6666666.229938.peg.1893 CDS AP013044.1 2215747 2214461 -1 - 1287 Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229938.peg.1894 CDS AP013044.1 2216391 2215774 -3 - 618 Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229938.peg.1895 CDS AP013044.1 2217044 2216415 -2 - 630 Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229938.peg.1896 CDS AP013044.1 2217779 2217048 -2 - 732 Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229938.peg.1897 CDS AP013044.1 2218963 2217776 -1 - 1188 Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229938.peg.1898 CDS AP013044.1 2220519 2219134 -3 - 1386 Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-) Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229938.peg.1899 CDS AP013044.1 2220884 2221903 2 + 1020 FIG00897204: hypothetical protein - none -
fig|6666666.229938.peg.1900 CDS AP013044.1 2221935 2223620 3 + 1686 FIG00899229: hypothetical protein - none -
fig|6666666.229938.peg.1901 CDS AP013044.1 2223831 2225582 3 + 1752 Phosphoglucomutase (EC 5.4.2.2) - none -
fig|6666666.229938.peg.1902 CDS AP013044.1 2226199 2225726 -1 - 474 NADPH dependent preQ0 reductase (EC 1.7.1.13) - none -
fig|6666666.229938.peg.1903 CDS AP013044.1 2227475 2226324 -2 - 1152 GTP-binding protein Obg CBSS-176279.3.peg.868;
Universal GTPases
fig|6666666.229938.peg.1904 CDS AP013044.1 2228099 2227521 -2 - 579 Adenylate kinase (EC 2.7.4.3) Purine conversions
fig|6666666.229938.peg.1905 CDS AP013044.1 2228666 2228124 -2 - 543 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
Purine conversions
fig|6666666.229938.peg.1906 CDS AP013044.1 2228899 2229990 1 + 1092 Gll1843 protein - none -
fig|6666666.229938.peg.1907 CDS AP013044.1 2229987 2230643 3 + 657 hypothetical protein - none -
fig|6666666.229938.peg.1908 CDS AP013044.1 2230696 2231103 1 + 408 Possible glyoxylase family protein (Lactoylglutathione lyase) (EC 4.4.1.5) - none -
fig|6666666.229938.peg.1909 CDS AP013044.1 2231461 2233722 1 + 2262 NADH dehydrogenase subunit 2 - none -
fig|6666666.229938.peg.1910 CDS AP013044.1 2233685 2234887 2 + 1203 hypothetical protein - none -
fig|6666666.229938.peg.1911 CDS AP013044.1 2235839 2234889 -2 - 951 Glycosyltransferase - none -
fig|6666666.229938.peg.1912 CDS AP013044.1 2236597 2235836 -1 - 762 FIG00896949: hypothetical protein - none -
fig|6666666.229938.peg.1913 CDS AP013044.1 2236722 2238185 3 + 1464 sodium/iodide co-transporter - none -
fig|6666666.229938.peg.1914 CDS AP013044.1 2239490 2238201 -2 - 1290 Inner membrane protein CreD-like protein Tolerance to colicin E2
fig|6666666.229938.peg.1915 CDS AP013044.1 2240006 2239692 -2 - 315 Bsl7504 protein - none -
fig|6666666.229938.peg.1916 CDS AP013044.1 2240512 2240003 -1 - 510 hypothetical protein - none -
fig|6666666.229938.peg.1917 CDS AP013044.1 2240559 2240684 3 + 126 hypothetical protein - none -
fig|6666666.229938.peg.1918 CDS AP013044.1 2240849 2240694 -2 - 156 hypothetical protein - none -
fig|6666666.229938.peg.1919 CDS AP013044.1 2246710 2240909 -1 - 5802 hypothetical protein - none -
fig|6666666.229938.peg.1920 CDS AP013044.1 2247000 2247134 3 + 135 hypothetical protein - none -
fig|6666666.229938.peg.1921 CDS AP013044.1 2247224 2248339 2 + 1116 thiol:disulfide interchange protein - none -
fig|6666666.229938.peg.1922 CDS AP013044.1 2249081 2248410 -2 - 672 Similar to tRNA pseudouridine synthase C, group TruC1 RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229938.peg.1923 CDS AP013044.1 2250313 2249201 -1 - 1113 Beta-lactamase class C and other penicillin binding proteins Beta-lactamase
fig|6666666.229938.peg.1924 CDS AP013044.1 2251104 2250358 -3 - 747 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) - none -
fig|6666666.229938.peg.1925 CDS AP013044.1 2252102 2251158 -2 - 945 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) - none -
fig|6666666.229938.peg.1926 CDS AP013044.1 2252706 2252092 -3 - 615 Transcriptional regulator, TetR family - none -
fig|6666666.229938.peg.1927 CDS AP013044.1 2253314 2253033 -2 - 282 hypothetical protein - none -
fig|6666666.229938.peg.1928 CDS AP013044.1 2253900 2253286 -3 - 615 hypothetical protein - none -
fig|6666666.229938.peg.1929 CDS AP013044.1 2254269 2253931 -3 - 339 hypothetical protein - none -
fig|6666666.229938.peg.1930 CDS AP013044.1 2256552 2254360 -3 - 2193 Periplasmic beta-glucosidase (EC 3.2.1.21) - none -
fig|6666666.229938.peg.1931 CDS AP013044.1 2257368 2256682 -3 - 687 lipoprotein PG3 - none -
fig|6666666.229938.peg.1932 CDS AP013044.1 2257498 2257623 1 + 126 hypothetical protein - none -
fig|6666666.229938.peg.1933 CDS AP013044.1 2260987 2258306 -1 - 2682 ClpB protein Protein chaperones;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229938.peg.1934 CDS AP013044.1 2261092 2261811 1 + 720 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Ribosome biogenesis bacterial;
YgjD and YeaZ;
YjeE
fig|6666666.229938.peg.1935 CDS AP013044.1 2261808 2262701 3 + 894 Phospholipase A1 precursor (EC 3.1.1.32, EC 3.1.1.4); Outer membrane phospholipase A Triacylglycerol metabolism
fig|6666666.229938.peg.1936 CDS AP013044.1 2264755 2263139 -1 - 1617 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229938.peg.1937 CDS AP013044.1 2266036 2264789 -1 - 1248 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229938.peg.1938 CDS AP013044.1 2267403 2266045 -3 - 1359 ATPase component BioM of energizing module of biotin ECF transporter - none -
fig|6666666.229938.peg.1939 CDS AP013044.1 2267789 2268703 2 + 915 hypothetical protein - none -
fig|6666666.229938.peg.1940 CDS AP013044.1 2268724 2270286 1 + 1563 Alanyl-tRNA synthetase (EC 6.1.1.7) CBSS-226186.1.peg.3994;
Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229938.peg.1941 CDS AP013044.1 2270412 2270849 3 + 438 hypothetical protein - none -
fig|6666666.229938.peg.1942 CDS AP013044.1 2271952 2272866 1 + 915 N-acetylneuraminate lyase (EC 4.1.3.3) - none -
fig|6666666.229938.peg.1943 CDS AP013044.1 2272872 2274050 3 + 1179 N-acylglucosamine 2-epimerase (EC 5.1.3.8) - none -
fig|6666666.229938.peg.1944 CDS AP013044.1 2274075 2275319 3 + 1245 Major facilitator family transporter - none -
fig|6666666.229938.peg.1945 CDS AP013044.1 2275352 2278735 2 + 3384 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.1946 CDS AP013044.1 2278766 2280334 2 + 1569 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.1947 CDS AP013044.1 2280359 2282035 2 + 1677 Sialidase (EC 3.2.1.18) Galactosylceramide and Sulfatide metabolism
fig|6666666.229938.peg.1948 CDS AP013044.1 2282032 2284173 1 + 2142 Beta-hexosaminidase (EC 3.2.1.52) Chitin and N-acetylglucosamine utilization
fig|6666666.229938.peg.1949 CDS AP013044.1 2284196 2286124 2 + 1929 Sialic acid-specific 9-O-acetylesterase - none -
fig|6666666.229938.peg.1950 CDS AP013044.1 2286132 2287346 3 + 1215 Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase - none -
fig|6666666.229938.peg.1951 CDS AP013044.1 2289086 2287614 -2 - 1473 Optional hypothetical component of the B12 transporter BtuN - none -
fig|6666666.229938.peg.1952 CDS AP013044.1 2289279 2289100 -3 - 180 hypothetical protein - none -
fig|6666666.229938.peg.1953 CDS AP013044.1 2291967 2289625 -3 - 2343 Outer membrane vitamin B12 receptor BtuB - none -
fig|6666666.229938.peg.1954 CDS AP013044.1 2292968 2292033 -2 - 936 Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Cobalamin synthesis
fig|6666666.229938.peg.1955 CDS AP013044.1 2294525 2293062 -2 - 1464 Optional hypothetical component of the B12 transporter BtuN - none -
fig|6666666.229938.peg.1956 CDS AP013044.1 2295813 2294539 -3 - 1275 hypothetical protein - none -
fig|6666666.229938.peg.1957 CDS AP013044.1 2298191 2295831 -2 - 2361 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229938.peg.1958 CDS AP013044.1 2298328 2298513 1 + 186 hypothetical protein - none -
fig|6666666.229938.peg.1959 CDS AP013044.1 2298729 2299907 3 + 1179 Thiamin biosynthesis lipoprotein ApbE Iron-sulfur cluster assembly
fig|6666666.229938.peg.1960 CDS AP013044.1 2300236 2300048 -1 - 189 hypothetical protein - none -
fig|6666666.229938.peg.1961 CDS AP013044.1 2301259 2300252 -1 - 1008 Putative phosphohydrolase, Icc family - none -
fig|6666666.229938.peg.1962 CDS AP013044.1 2301452 2303476 2 + 2025 Membrane protein containing HD superfamily hydrolase domain, YQFF ortholog CBSS-56780.10.peg.1536
fig|6666666.229938.peg.1963 CDS AP013044.1 2303648 2303770 2 + 123 hypothetical protein - none -
fig|6666666.229938.peg.1964 CDS AP013044.1 2303832 2303981 3 + 150 hypothetical protein - none -
fig|6666666.229938.peg.1965 CDS AP013044.1 2304023 2304589 2 + 567 Flavodoxin Flavodoxin
fig|6666666.229938.peg.1966 CDS AP013044.1 2304944 2305354 2 + 411 Integrase - none -
fig|6666666.229938.peg.1967 CDS AP013044.1 2305583 2305876 2 + 294 FIG00937377: hypothetical protein - none -
fig|6666666.229938.peg.1968 CDS AP013044.1 2306132 2306743 2 + 612 FIG00937377: hypothetical protein - none -
fig|6666666.229938.peg.1969 CDS AP013044.1 2307550 2307663 1 + 114 hypothetical protein - none -
fig|6666666.229938.peg.1970 CDS AP013044.1 2308135 2308992 1 + 858 hypothetical protein - none -
fig|6666666.229938.peg.1971 CDS AP013044.1 2311063 2309036 -1 - 2028 hypothetical protein - none -
fig|6666666.229938.peg.1972 CDS AP013044.1 2312306 2311119 -2 - 1188 Membrane-fusion protein - none -
fig|6666666.229938.peg.1973 CDS AP013044.1 2314565 2312313 -2 - 2253 putative TonB-dependent receptor - none -
fig|6666666.229938.peg.1974 CDS AP013044.1 2316871 2314622 -1 - 2250 putative TonB-dependent receptor - none -
fig|6666666.229938.peg.1975 CDS AP013044.1 2319180 2316928 -3 - 2253 putative TonB-dependent receptor - none -
fig|6666666.229938.peg.1976 CDS AP013044.1 2321528 2319237 -2 - 2292 putative TonB-dependent receptor - none -
fig|6666666.229938.peg.1977 CDS AP013044.1 2323314 2321995 -3 - 1320 Arylsulfatase regulator (Fe-S oxidoreductase) - none -
fig|6666666.229938.peg.1978 CDS AP013044.1 2325250 2323346 -1 - 1905 hypothetical protein - none -
fig|6666666.229938.peg.1979 CDS AP013044.1 2326263 2325328 -3 - 936 hypothetical protein - none -
fig|6666666.229938.peg.1980 CDS AP013044.1 2327157 2326441 -3 - 717 Transcriptional regulator - none -
fig|6666666.229938.peg.1981 CDS AP013044.1 2327508 2330294 3 + 2787 FIG00897756: hypothetical protein - none -
fig|6666666.229938.peg.1982 CDS AP013044.1 2331471 2330443 -3 - 1029 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) Rhamnose containing glycans;
dTDP-rhamnose synthesis
fig|6666666.229938.peg.1983 CDS AP013044.1 2332753 2332640 -1 - 114 hypothetical protein - none -
fig|6666666.229938.peg.1984 CDS AP013044.1 2333689 2332769 -1 - 921 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229938.peg.1985 CDS AP013044.1 2333894 2333691 -2 - 204 hypothetical protein - none -
fig|6666666.229938.peg.1986 CDS AP013044.1 2334040 2335209 1 + 1170 Aminopeptidase C (EC 3.4.22.40) Protein degradation
fig|6666666.229938.peg.1987 CDS AP013044.1 2335216 2335680 1 + 465 hypothetical protein - none -
fig|6666666.229938.peg.1988 CDS AP013044.1 2336764 2335805 -1 - 960 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) PhoR-PhoB two-component regulatory system;
Phosphate metabolism
fig|6666666.229938.peg.1989 CDS AP013044.1 2336947 2337900 1 + 954 Pantothenate kinase (EC 2.7.1.33) Coenzyme A Biosynthesis
fig|6666666.229938.peg.1990 CDS AP013044.1 2338051 2338671 1 + 621 Transcriptional regulator, TetR family - none -
fig|6666666.229938.peg.1991 CDS AP013044.1 2338773 2340050 3 + 1278 Outer membrane efflux protein - none -
fig|6666666.229938.peg.1992 CDS AP013044.1 2340069 2341004 3 + 936 FIG00938133: hypothetical protein - none -
fig|6666666.229938.peg.1993 CDS AP013044.1 2341001 2341921 2 + 921 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229938.peg.1994 CDS AP013044.1 2341918 2342661 1 + 744 Lipid A export ATP-binding/permease protein MsbA - none -
fig|6666666.229938.peg.1995 CDS AP013044.1 2342669 2343775 2 + 1107 ABC transport system, permease component YbhR - none -
fig|6666666.229938.peg.1996 CDS AP013044.1 2343783 2344901 3 + 1119 ABC-type multidrug transport system, permease component - none -
fig|6666666.229938.peg.1997 CDS AP013044.1 2344921 2345478 1 + 558 FIG00522139: hypothetical protein - none -
fig|6666666.229938.peg.1998 CDS AP013044.1 2347124 2345766 -2 - 1359 hypothetical protein - none -
fig|6666666.229938.peg.1999 CDS AP013044.1 2348321 2347182 -2 - 1140 Outer membrane protein SusF Cellulosome
fig|6666666.229938.peg.2000 CDS AP013044.1 2349954 2348371 -3 - 1584 SusD, outer membrane protein Cellulosome
fig|6666666.229938.peg.2001 CDS AP013044.1 2353023 2349979 -3 - 3045 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.229938.peg.2002 CDS AP013044.1 2355169 2353043 -1 - 2127 Alpha-glucosidase SusB (EC 3.2.1.20) Cellulosome
fig|6666666.229938.peg.2003 CDS AP013044.1 2356100 2355375 -2 - 726 Methyltransferase (EC 2.1.1.-) - none -
fig|6666666.229938.peg.2004 CDS AP013044.1 2356307 2356435 2 + 129 hypothetical protein - none -
fig|6666666.229938.peg.2005 CDS AP013044.1 2356459 2357589 1 + 1131 tRNA-guanine transglycosylase (EC 2.4.2.29) CBSS-211586.1.peg.2832;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229938.peg.2006 CDS AP013044.1 2357591 2358691 2 + 1101 membrane protein, putative - none -
fig|6666666.229938.peg.2007 CDS AP013044.1 2358795 2358670 -3 - 126 hypothetical protein - none -
fig|6666666.229938.peg.2008 CDS AP013044.1 2358775 2360535 1 + 1761 Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase; Melittin resistance protein PqaB - none -
fig|6666666.229938.peg.2009 CDS AP013044.1 2360683 2360558 -1 - 126 hypothetical protein - none -
fig|6666666.229938.peg.2010 CDS AP013044.1 2360816 2361115 2 + 300 hypothetical protein - none -
fig|6666666.229938.peg.2011 CDS AP013044.1 2361506 2361345 -2 - 162 Rubredoxin Rubrerythrin
fig|6666666.229938.peg.2012 CDS AP013044.1 2362726 2361782 -1 - 945 Hydrogen peroxide-inducible genes activator LysR-family proteins in Escherichia coli;
LysR-family proteins in Salmonella enterica Typhimurium;
Oxidative stress;
Thioredoxin-disulfide reductase
fig|6666666.229938.peg.2013 CDS AP013044.1 2362855 2363331 1 + 477 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) Oxidative stress;
Oxidative stress;
Oxidative stress
fig|6666666.229938.peg.2014 CDS AP013044.1 2364415 2363411 -1 - 1005 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel Potassium homeostasis
fig|6666666.229938.peg.2015 CDS AP013044.1 2365421 2364666 -2 - 756 ThiF domain protein - none -
fig|6666666.229938.peg.2016 CDS AP013044.1 2365813 2365571 -1 - 243 Diacylglycerol kinase (EC 2.7.1.107) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229938.peg.2017 CDS AP013044.1 2366457 2366305 -3 - 153 hypothetical protein - none -
fig|6666666.229938.peg.2018 CDS AP013044.1 2366468 2367550 2 + 1083 Glucuronyl hydrolase - none -
fig|6666666.229938.peg.2019 CDS AP013044.1 2367608 2370733 2 + 3126 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.2020 CDS AP013044.1 2370745 2372451 1 + 1707 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.2021 CDS AP013044.1 2372650 2373492 1 + 843 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229938.peg.2022 CDS AP013044.1 2373506 2374648 2 + 1143 hypothetical protein - none -
fig|6666666.229938.peg.2023 CDS AP013044.1 2374645 2376195 1 + 1551 Choline-sulfatase (EC 3.1.6.6) - none -
fig|6666666.229938.peg.2024 CDS AP013044.1 2376232 2378157 1 + 1926 FIG00896938: hypothetical protein - none -
fig|6666666.229938.peg.2025 CDS AP013044.1 2378191 2379231 1 + 1041 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229938.peg.2026 CDS AP013044.1 2379268 2380059 1 + 792 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229938.peg.2027 CDS AP013044.1 2380077 2380757 3 + 681 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229938.peg.2028 CDS AP013044.1 2380806 2382233 3 + 1428 Hexuronate transporter D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229938.peg.2029 CDS AP013044.1 2382967 2383119 1 + 153 hypothetical protein - none -
fig|6666666.229938.peg.2030 CDS AP013044.1 2384366 2383161 -2 - 1206 FIG00898264: hypothetical protein - none -
fig|6666666.229938.peg.2031 CDS AP013044.1 2384882 2385271 2 + 390 Membrane fusion efflux protein - none -
fig|6666666.229938.peg.2032 CDS AP013044.1 2385275 2385964 2 + 690 hypothetical protein - none -
fig|6666666.229938.peg.2033 CDS AP013044.1 2385961 2387718 1 + 1758 hypothetical protein - none -
fig|6666666.229938.peg.2034 CDS AP013044.1 2388768 2388914 3 + 147 hypothetical protein - none -
fig|6666666.229938.peg.2035 CDS AP013044.1 2390202 2390327 3 + 126 hypothetical protein - none -
fig|6666666.229938.peg.2036 CDS AP013044.1 2390657 2390890 2 + 234 hypothetical protein - none -
fig|6666666.229938.peg.2037 CDS AP013044.1 2390848 2392266 1 + 1419 hypothetical protein - none -
fig|6666666.229938.peg.2038 CDS AP013044.1 2392263 2392850 3 + 588 hypothetical protein - none -
fig|6666666.229938.peg.2039 CDS AP013044.1 2393404 2393099 -1 - 306 Mobile element protein - none -
fig|6666666.229938.peg.2040 CDS AP013044.1 2394262 2393552 -1 - 711 Mobile element protein - none -
fig|6666666.229938.peg.2041 CDS AP013044.1 2395097 2394519 -2 - 579 hypothetical protein - none -
fig|6666666.229938.peg.2042 CDS AP013044.1 2396126 2395461 -2 - 666 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis;
Stationary phase repair cluster
fig|6666666.229938.peg.2043 CDS AP013044.1 2396340 2396137 -3 - 204 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229938.peg.2044 CDS AP013044.1 2397687 2396356 -3 - 1332 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) DNA repair, bacterial;
Purine salvage cluster
fig|6666666.229938.peg.2045 CDS AP013044.1 2399122 2397674 -1 - 1449 Subtilisin-like serine proteases - none -
fig|6666666.229938.peg.2046 CDS AP013044.1 2399327 2400361 2 + 1035 Aspartate--ammonia ligase (EC 6.3.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis
fig|6666666.229938.peg.2047 CDS AP013044.1 2400383 2402578 2 + 2196 Glutamine synthetase type III, GlnN (EC 6.3.1.2) Ammonia assimilation;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Glutamine synthetases
fig|6666666.229938.peg.2048 CDS AP013044.1 2402792 2404723 2 + 1932 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase NAD and NADP cofactor biosynthesis global;
NAD and NADP cofactor biosynthesis global
fig|6666666.229938.peg.2049 CDS AP013044.1 2404727 2407042 2 + 2316 putative patatin-like phospholipase - none -
fig|6666666.229938.peg.2050 CDS AP013044.1 2407374 2408018 3 + 645 FIG053235: Diacylglucosamine hydrolase like Llipid A biosynthesis cluster
fig|6666666.229938.peg.2051 CDS AP013044.1 2408015 2409049 2 + 1035 Agmatine deiminase (EC 3.5.3.12) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229938.peg.2052 CDS AP013044.1 2409055 2409933 1 + 879 N-carbamoylputrescine amidase (3.5.1.53) Arginine and Ornithine Degradation;
Polyamine Metabolism
fig|6666666.229938.peg.2053 CDS AP013044.1 2409959 2410543 2 + 585 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.2054 CDS AP013044.1 2410676 2411476 2 + 801 CRISPR repeat RNA endoribonuclease Cas6 CRISPR-associated cluster;
CRISPRs
fig|6666666.229938.peg.2055 CDS AP013044.1 2411503 2412126 1 + 624 hypothetical protein - none -
fig|6666666.229938.peg.2056 CDS AP013044.1 2412194 2412919 2 + 726 hypothetical protein - none -
fig|6666666.229938.peg.2057 CDS AP013044.1 2412912 2414453 3 + 1542 hypothetical protein - none -
fig|6666666.229938.peg.2058 CDS AP013044.1 2414473 2415390 1 + 918 hypothetical protein - none -
fig|6666666.229938.peg.2059 CDS AP013044.1 2415578 2417662 2 + 2085 CRISPR-associated helicase Cas3 CRISPRs
fig|6666666.229938.peg.2060 CDS AP013044.1 2417693 2418247 2 + 555 hypothetical protein - none -
fig|6666666.229938.peg.2061 CDS AP013044.1 2418270 2419268 3 + 999 Fic family protein - none -
fig|6666666.229938.peg.2062 CDS AP013044.1 2419543 2420073 1 + 531 CRISPR-associated RecB family exonuclease Cas4a CRISPRs
fig|6666666.229938.peg.2063 CDS AP013044.1 2420120 2421562 2 + 1443 CRISPR-associated protein, Csm1 family CRISPR-associated cluster;
CRISPRs
fig|6666666.229938.peg.2064 CDS AP013044.1 2421568 2422038 1 + 471 CRISPR-associated protein, Csm2 family CRISPR-associated cluster;
CRISPRs
fig|6666666.229938.peg.2065 CDS AP013044.1 2422048 2422686 1 + 639 CRISPR-associated RAMP Csm3 CRISPR-associated cluster;
CRISPRs
fig|6666666.229938.peg.2066 CDS AP013044.1 2422686 2423681 3 + 996 CRISPR-associated RAMP protein, Csm4 family CRISPR-associated cluster;
CRISPRs
fig|6666666.229938.peg.2067 CDS AP013044.1 2423864 2425033 2 + 1170 hypothetical protein - none -
fig|6666666.229938.peg.2068 CDS AP013044.1 2426009 2425881 -2 - 129 hypothetical protein - none -
fig|6666666.229938.peg.2069 CDS AP013044.1 2426205 2426029 -3 - 177 hypothetical protein - none -
fig|6666666.229938.peg.2070 CDS AP013044.1 2429507 2426205 -2 - 3303 Phage-related protein - none -
fig|6666666.229938.peg.2071 CDS AP013044.1 2429738 2429607 -2 - 132 hypothetical protein - none -
fig|6666666.229938.peg.2072 CDS AP013044.1 2431950 2430241 -3 - 1710 hypothetical protein - none -
fig|6666666.229938.peg.2073 CDS AP013044.1 2432762 2431998 -2 - 765 hypothetical protein - none -
fig|6666666.229938.peg.2074 CDS AP013044.1 2436589 2432759 -1 - 3831 massive surface protein MspG - none -
fig|6666666.229938.peg.2075 CDS AP013044.1 2436761 2436576 -2 - 186 hypothetical protein - none -
fig|6666666.229938.peg.2076 CDS AP013044.1 2437201 2436794 -1 - 408 hypothetical protein - none -
fig|6666666.229938.peg.2077 CDS AP013044.1 2437728 2437240 -3 - 489 hypothetical protein - none -
fig|6666666.229938.peg.2078 CDS AP013044.1 2438697 2438161 -3 - 537 hypothetical protein - none -
fig|6666666.229938.peg.2079 CDS AP013044.1 2439206 2438709 -2 - 498 Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) - none -
fig|6666666.229938.peg.2080 CDS AP013044.1 2439552 2439196 -3 - 357 hypothetical protein - none -
fig|6666666.229938.peg.2081 CDS AP013044.1 2440092 2439664 -3 - 429 hypothetical protein - none -
fig|6666666.229938.peg.2082 CDS AP013044.1 2441257 2440244 -1 - 1014 hypothetical protein - none -
fig|6666666.229938.peg.2083 CDS AP013044.1 2441248 2441397 1 + 150 hypothetical protein - none -
fig|6666666.229938.peg.2084 CDS AP013044.1 2442452 2441382 -2 - 1071 hypothetical protein - none -
fig|6666666.229938.peg.2085 CDS AP013044.1 2442556 2442687 1 + 132 hypothetical protein - none -
fig|6666666.229938.peg.2086 CDS AP013044.1 2442778 2443212 1 + 435 hypothetical protein - none -
fig|6666666.229938.peg.2087 CDS AP013044.1 2443205 2443450 2 + 246 hypothetical protein - none -
fig|6666666.229938.peg.2088 CDS AP013044.1 2443447 2445078 1 + 1632 Phage protein - none -
fig|6666666.229938.peg.2089 CDS AP013044.1 2445148 2445573 1 + 426 hypothetical protein - none -
fig|6666666.229938.peg.2090 CDS AP013044.1 2445681 2446973 3 + 1293 hypothetical protein - none -
fig|6666666.229938.peg.2091 CDS AP013044.1 2447093 2448274 2 + 1182 hypothetical protein - none -
fig|6666666.229938.peg.2092 CDS AP013044.1 2448370 2448825 1 + 456 hypothetical protein - none -
fig|6666666.229938.peg.2093 CDS AP013044.1 2449532 2449368 -2 - 165 hypothetical protein - none -
fig|6666666.229938.peg.2094 CDS AP013044.1 2449750 2449529 -1 - 222 hypothetical protein - none -
fig|6666666.229938.peg.2095 CDS AP013044.1 2449940 2449737 -2 - 204 hypothetical protein - none -
fig|6666666.229938.peg.2096 CDS AP013044.1 2450431 2449937 -1 - 495 hypothetical protein - none -
fig|6666666.229938.peg.2097 CDS AP013044.1 2451437 2451222 -2 - 216 hypothetical protein - none -
fig|6666666.229938.peg.2098 CDS AP013044.1 2452541 2452329 -2 - 213 hypothetical protein - none -
fig|6666666.229938.peg.2099 CDS AP013044.1 2453680 2453033 -1 - 648 hypothetical protein - none -
fig|6666666.229938.peg.2100 CDS AP013044.1 2453841 2453689 -3 - 153 hypothetical protein - none -
fig|6666666.229938.peg.2101 CDS AP013044.1 2454413 2454213 -2 - 201 hypothetical protein - none -
fig|6666666.229938.peg.2102 CDS AP013044.1 2454799 2454590 -1 - 210 hypothetical protein - none -
fig|6666666.229938.peg.2103 CDS AP013044.1 2455027 2454800 -1 - 228 hypothetical protein - none -
fig|6666666.229938.peg.2104 CDS AP013044.1 2455992 2455024 -3 - 969 hypothetical protein - none -
fig|6666666.229938.peg.2105 CDS AP013044.1 2458147 2455994 -1 - 2154 hypothetical protein - none -
fig|6666666.229938.peg.2106 CDS AP013044.1 2458741 2458343 -1 - 399 hypothetical protein - none -
fig|6666666.229938.peg.2107 CDS AP013044.1 2458898 2458767 -2 - 132 hypothetical protein - none -
fig|6666666.229938.peg.2108 CDS AP013044.1 2459333 2459109 -2 - 225 hypothetical protein - none -
fig|6666666.229938.peg.2109 CDS AP013044.1 2459566 2459330 -1 - 237 hypothetical protein - none -
fig|6666666.229938.peg.2110 CDS AP013044.1 2459741 2459553 -2 - 189 hypothetical protein - none -
fig|6666666.229938.peg.2111 CDS AP013044.1 2460268 2460486 1 + 219 hypothetical protein - none -
fig|6666666.229938.peg.2112 CDS AP013044.1 2461481 2461329 -2 - 153 hypothetical protein - none -
fig|6666666.229938.peg.2113 CDS AP013044.1 2461704 2462714 3 + 1011 CRISPR-associated protein, Csm5 family CRISPR-associated cluster;
CRISPRs
fig|6666666.229938.peg.2114 CDS AP013044.1 2462716 2463960 1 + 1245 CRISPR-associated protein TM1812 - none -
fig|6666666.229938.peg.2115 CDS AP013044.1 2464340 2465356 2 + 1017 CRISPR-associated protein Cas1 CRISPRs
fig|6666666.229938.peg.2116 CDS AP013044.1 2465404 2465619 1 + 216 CRISPR-associated protein Cas2 CRISPRs
fig|6666666.229938.peg.2117 CDS AP013044.1 2469358 2469474 1 + 117 hypothetical protein - none -
fig|6666666.229938.peg.2118 CDS AP013044.1 2470553 2470377 -2 - 177 hypothetical protein - none -
fig|6666666.229938.peg.2119 CDS AP013044.1 2471730 2471912 3 + 183 hypothetical protein - none -
fig|6666666.229938.peg.2120 CDS AP013044.1 2472816 2473349 3 + 534 ferritin - none -
fig|6666666.229938.peg.2121 CDS AP013044.1 2475815 2473614 -2 - 2202 Pyrophosphate-energized proton pump (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229938.peg.2122 CDS AP013044.1 2477610 2476474 -3 - 1137 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) Polyamine Metabolism
fig|6666666.229938.peg.2123 CDS AP013044.1 2479993 2477615 -1 - 2379 ATP-dependent DNA helicase UvrD/PcrA DNA repair, bacterial UvrD and related helicases
fig|6666666.229938.peg.2124 CDS AP013044.1 2480389 2480661 1 + 273 DNA-binding protein HU-beta DNA structural proteins, bacterial
fig|6666666.229938.peg.2125 CDS AP013044.1 2481222 2480836 -3 - 387 Dihydroneopterin aldolase (EC 4.1.2.25) Folate Biosynthesis;
Folate biosynthesis cluster
fig|6666666.229938.peg.2126 CDS AP013044.1 2481281 2481700 2 + 420 FIG170317: hypothetical protein - none -
fig|6666666.229938.peg.2127 CDS AP013044.1 2484386 2481693 -2 - 2694 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.2128 CDS AP013044.1 2486942 2484405 -2 - 2538 Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) Ribonucleotide reduction
fig|6666666.229938.peg.2129 CDS AP013044.1 2487527 2487357 -2 - 171 Ferredoxin Soluble cytochromes and functionally related electron carriers
fig|6666666.229938.peg.2130 CDS AP013044.1 2487686 2488381 2 + 696 PorT protein - none -
fig|6666666.229938.peg.2131 CDS AP013044.1 2489186 2488368 -2 - 819 Phosphatidate cytidylyltransferase (EC 2.7.7.41) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229938.peg.2132 CDS AP013044.1 2491235 2489235 -2 - 2001 Cell division protein FtsH (EC 3.4.24.-) Bacterial Cell Division;
Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster
fig|6666666.229938.peg.2133 CDS AP013044.1 2491657 2491259 -1 - 399 Ribosomal silencing factor RsfA (former Iojap) - none -
fig|6666666.229938.peg.2134 CDS AP013044.1 2492827 2493120 1 + 294 hypothetical protein - none -
fig|6666666.229938.peg.2135 CDS AP013044.1 2493955 2500380 1 + 6426 hypothetical protein - none -
fig|6666666.229938.peg.2136 CDS AP013044.1 2500607 2500795 2 + 189 hypothetical protein - none -
fig|6666666.229938.peg.2137 CDS AP013044.1 2500847 2503978 2 + 3132 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.2138 CDS AP013044.1 2503998 2505947 3 + 1950 hypothetical protein - none -
fig|6666666.229938.peg.2139 CDS AP013044.1 2507963 2507019 -2 - 945 Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) - none -
fig|6666666.229938.peg.2140 CDS AP013044.1 2509654 2507999 -1 - 1656 FIG00939558: hypothetical protein - none -
fig|6666666.229938.peg.2141 CDS AP013044.1 2510985 2509675 -3 - 1311 Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17) Folate Biosynthesis;
Folate Biosynthesis
fig|6666666.229938.peg.2142 CDS AP013044.1 2511215 2512543 2 + 1329 Predicted ATPase related to phosphate starvation-inducible protein PhoH Phosphate metabolism
fig|6666666.229938.peg.2143 CDS AP013044.1 2512578 2513483 3 + 906 Cobalt-zinc-cadmium resistance protein Cobalt-zinc-cadmium resistance
fig|6666666.229938.peg.2144 CDS AP013044.1 2514166 2513480 -1 - 687 Queuosine Biosynthesis QueC ATPase Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229938.peg.2145 CDS AP013044.1 2514873 2514175 -3 - 699 Putative preQ0 transporter Queuosine-Archaeosine Biosynthesis
fig|6666666.229938.peg.2146 CDS AP013044.1 2515065 2515388 3 + 324 L-fucose mutarotase, type 2 - none -
fig|6666666.229938.peg.2147 CDS AP013044.1 2515824 2516045 3 + 222 hypothetical protein - none -
fig|6666666.229938.peg.2148 CDS AP013044.1 2516741 2517739 2 + 999 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229938.peg.2149 CDS AP013044.1 2517720 2517866 3 + 147 DNA polymerase III beta subunit (EC 2.7.7.7) Cell Division Subsystem including YidCD;
DNA replication cluster 1
fig|6666666.229938.peg.2150 CDS AP013044.1 2517878 2518642 2 + 765 DNA Pol III Epsilon Chain - none -
fig|6666666.229938.peg.2151 CDS AP013044.1 2518692 2519897 3 + 1206 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) Coenzyme A Biosynthesis;
Coenzyme A Biosynthesis
fig|6666666.229938.peg.2152 CDS AP013044.1 2519894 2520799 2 + 906 FIG00896367: hypothetical protein - none -
fig|6666666.229938.peg.2153 CDS AP013044.1 2520803 2522467 2 + 1665 DNA repair protein RecN DNA repair, bacterial
fig|6666666.229938.peg.2154 CDS AP013044.1 2522478 2523230 3 + 753 23S rRNA (guanosine-2@1-O-) -methyltransferase rlmB (EC 2.1.1.-) RNA methylation
fig|6666666.229938.peg.2155 CDS AP013044.1 2523793 2523446 -1 - 348 LSU ribosomal protein L20p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.229938.peg.2156 CDS AP013044.1 2524078 2523890 -1 - 189 LSU ribosomal protein L35p Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Ribosome LSU bacterial
fig|6666666.229938.peg.2157 CDS AP013044.1 2524766 2524152 -2 - 615 Translation initiation factor 3 Mycobacterium virulence operon involved in protein synthesis (LSU ribosomal proteins);
Translation initiation factors bacterial
fig|6666666.229938.peg.2158 CDS AP013044.1 2526771 2524813 -3 - 1959 Threonyl-tRNA synthetase (EC 6.1.1.3) tRNA aminoacylation, Thr
fig|6666666.229938.peg.2159 CDS AP013044.1 2526950 2526795 -2 - 156 hypothetical protein - none -
fig|6666666.229938.peg.2160 CDS AP013044.1 2528701 2527199 -1 - 1503 FIG00897390: hypothetical protein - none -
fig|6666666.229938.peg.2161 CDS AP013044.1 2530175 2528751 -2 - 1425 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) Dipeptidases (EC 3.4.13.-);
Recycling of Peptidoglycan Amino Acids
fig|6666666.229938.peg.2162 CDS AP013044.1 2530391 2530579 2 + 189 hypothetical protein - none -
fig|6666666.229938.peg.2163 CDS AP013044.1 2530594 2531205 1 + 612 FIG00899086: hypothetical protein - none -
fig|6666666.229938.peg.2164 CDS AP013044.1 2532438 2531236 -3 - 1203 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Chitin and N-acetylglucosamine utilization
fig|6666666.229938.peg.2165 CDS AP013044.1 2533629 2532445 -3 - 1185 NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) - none -
fig|6666666.229938.peg.2166 CDS AP013044.1 2534531 2533788 -2 - 744 transcriptional regulator, Crp/Fnr family Oxidative stress
fig|6666666.229938.peg.2167 CDS AP013044.1 2534556 2534741 3 + 186 hypothetical protein - none -
fig|6666666.229938.peg.2168 CDS AP013044.1 2534822 2535703 2 + 882 hypothetical protein - none -
fig|6666666.229938.peg.2169 CDS AP013044.1 2537894 2535825 -2 - 2070 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229938.peg.2170 CDS AP013044.1 2538738 2537950 -3 - 789 Beta-phosphoglucomutase (EC 5.4.2.6) Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.2171 CDS AP013044.1 2539251 2538772 -3 - 480 Tryptophan synthase beta chain like (EC 4.2.1.20) Chorismate: Intermediate for synthesis of Tryptophan, PAPA antibiotics, PABA, 3-hydroxyanthranilate and more.
fig|6666666.229938.peg.2172 CDS AP013044.1 2540322 2539315 -3 - 1008 GldB - none -
fig|6666666.229938.peg.2173 CDS AP013044.1 2541447 2540323 -3 - 1125 DNA polymerase III delta prime subunit (EC 2.7.7.7) - none -
fig|6666666.229938.peg.2174 CDS AP013044.1 2542403 2541450 -2 - 954 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines
fig|6666666.229938.peg.2175 CDS AP013044.1 2542739 2542533 -2 - 207 hypothetical protein - none -
fig|6666666.229938.peg.2176 CDS AP013044.1 2544104 2542746 -2 - 1359 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229938.peg.2177 CDS AP013044.1 2544580 2544747 1 + 168 hypothetical protein - none -
fig|6666666.229938.peg.2178 CDS AP013044.1 2544812 2547826 2 + 3015 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.2179 CDS AP013044.1 2547840 2549849 3 + 2010 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.2180 CDS AP013044.1 2551059 2549860 -3 - 1200 conserved hypothetical protein, putative mannosyltransferase - none -
fig|6666666.229938.peg.2181 CDS AP013044.1 2552290 2551052 -1 - 1239 TPR/glycosyl transferase domain protein - none -
fig|6666666.229938.peg.2182 CDS AP013044.1 2553384 2552287 -3 - 1098 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) CMP-N-acetylneuraminate Biosynthesis
fig|6666666.229938.peg.2183 CDS AP013044.1 2554697 2553405 -2 - 1293 FIG00935947: hypothetical protein - none -
fig|6666666.229938.peg.2184 CDS AP013044.1 2555647 2554694 -1 - 954 FIG00897269: hypothetical protein - none -
fig|6666666.229938.peg.2185 CDS AP013044.1 2556665 2555649 -2 - 1017 RecA protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway;
DNA repair system including RecA, MutS and a hypothetical protein
fig|6666666.229938.peg.2186 CDS AP013044.1 2557154 2556699 -2 - 456 Thiol peroxidase, Bcp-type (EC 1.11.1.15) Thioredoxin-disulfide reductase
fig|6666666.229938.peg.2187 CDS AP013044.1 2558419 2557226 -1 - 1194 Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) Polyamine Metabolism
fig|6666666.229938.peg.2188 CDS AP013044.1 2558592 2559239 3 + 648 LolA-like outer-membrane lipoprotein carrier protein - none -
fig|6666666.229938.peg.2189 CDS AP013044.1 2559217 2559786 1 + 570 hypothetical protein - none -
fig|6666666.229938.peg.2190 CDS AP013044.1 2559776 2560147 2 + 372 (3R)-hydroxymyristoyl-[ACP] dehydratase (EC 4.2.1.-) - none -
fig|6666666.229938.peg.2191 CDS AP013044.1 2560144 2560926 1 + 783 glycosyl transferase, family 2 - none -
fig|6666666.229938.peg.2192 CDS AP013044.1 2560923 2564420 3 + 3498 FIG00939958: hypothetical protein - none -
fig|6666666.229938.peg.2193 CDS AP013044.1 2564695 2564495 -1 - 201 hypothetical protein - none -
fig|6666666.229938.peg.2194 CDS AP013044.1 2564865 2565086 3 + 222 hypothetical protein - none -
fig|6666666.229938.peg.2195 CDS AP013044.1 2565594 2565349 -3 - 246 putative DNA methylase - none -
fig|6666666.229938.peg.2196 CDS AP013044.1 2565597 2566976 3 + 1380 probable hemagglutinin-related protein - none -
fig|6666666.229938.peg.2197 CDS AP013044.1 2567679 2568845 3 + 1167 hypothetical protein - none -
fig|6666666.229938.peg.2198 CDS AP013044.1 2568857 2569741 2 + 885 hypothetical protein - none -
fig|6666666.229938.peg.2199 CDS AP013044.1 2570066 2571160 2 + 1095 hypothetical protein - none -
fig|6666666.229938.peg.2200 CDS AP013044.1 2571317 2571517 2 + 201 hypothetical protein - none -
fig|6666666.229938.peg.2201 CDS AP013044.1 2572049 2572468 2 + 420 Rhs family protein - none -
fig|6666666.229938.peg.2202 CDS AP013044.1 2572484 2574283 2 + 1800 Rhs family protein - none -
fig|6666666.229938.peg.2203 CDS AP013044.1 2574881 2575735 2 + 855 Rhs family protein - none -
fig|6666666.229938.peg.2204 CDS AP013044.1 2576180 2576299 2 + 120 hypothetical protein - none -
fig|6666666.229938.peg.2205 CDS AP013044.1 2577421 2577597 1 + 177 hypothetical protein - none -
fig|6666666.229938.peg.2206 CDS AP013044.1 2578634 2578038 -2 - 597 Transposase - none -
fig|6666666.229938.peg.2207 CDS AP013044.1 2578902 2579093 3 + 192 short chain dehydrogenase( EC:1.- ) - none -
fig|6666666.229938.peg.2208 CDS AP013044.1 2579187 2580290 3 + 1104 Outer membrane protein romA - none -
fig|6666666.229938.peg.2209 CDS AP013044.1 2580409 2580900 1 + 492 DNA polymerase III epsilon subunit (EC 2.7.7.7) - none -
fig|6666666.229938.peg.2210 CDS AP013044.1 2581243 2581521 1 + 279 hypothetical protein - none -
fig|6666666.229938.peg.2211 CDS AP013044.1 2581524 2584553 3 + 3030 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.2212 CDS AP013044.1 2584576 2586210 1 + 1635 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.2213 CDS AP013044.1 2586287 2587756 2 + 1470 hypothetical protein - none -
fig|6666666.229938.peg.2214 CDS AP013044.1 2587781 2589241 2 + 1461 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229938.peg.2215 CDS AP013044.1 2589487 2589639 1 + 153 hypothetical protein - none -
fig|6666666.229938.peg.2216 CDS AP013044.1 2589781 2591979 1 + 2199 Thiamin-regulated outer membrane receptor Omr1 Thiamin biosynthesis
fig|6666666.229938.peg.2217 CDS AP013044.1 2592051 2592677 3 + 627 Predicted thiamin transporter PnuT Thiamin biosynthesis
fig|6666666.229938.peg.2218 CDS AP013044.1 2595139 2592665 -1 - 2475 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) Peptidoglycan biosynthesis--gjo
fig|6666666.229938.peg.2219 CDS AP013044.1 2596134 2595142 -3 - 993 FIG00898560: hypothetical protein - none -
fig|6666666.229938.peg.2220 CDS AP013044.1 2596655 2598070 2 + 1416 Peptidase, M23/M37 family - none -
fig|6666666.229938.peg.2221 CDS AP013044.1 2598154 2598702 1 + 549 FIG00651728: hypothetical protein - none -
fig|6666666.229938.peg.2222 CDS AP013044.1 2598758 2599966 2 + 1209 hypothetical protein - none -
fig|6666666.229938.peg.2223 CDS AP013044.1 2599979 2600734 2 + 756 Triosephosphate isomerase (EC 5.3.1.1) Glycolysis and Gluconeogenesis
fig|6666666.229938.peg.2224 CDS AP013044.1 2600767 2601243 1 + 477 hypothetical protein - none -
fig|6666666.229938.peg.2225 CDS AP013044.1 2601246 2601827 3 + 582 GTP cyclohydrolase I (EC 3.5.4.16) type 1 Folate Biosynthesis;
Folate biosynthesis cluster;
Queuosine-Archaeosine Biosynthesis;
tRNA modification Bacteria
fig|6666666.229938.peg.2226 CDS AP013044.1 2601891 2602505 3 + 615 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA - none -
fig|6666666.229938.peg.2227 CDS AP013044.1 2602857 2602618 -3 - 240 hypothetical protein - none -
fig|6666666.229938.peg.2228 CDS AP013044.1 2603474 2602911 -2 - 564 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.2229 CDS AP013044.1 2603831 2605471 2 + 1641 Probable dipeptidase (EC 3.4.-.-) - none -
fig|6666666.229938.peg.2230 CDS AP013044.1 2605501 2605968 1 + 468 hypothetical protein - none -
fig|6666666.229938.peg.2231 CDS AP013044.1 2608737 2606131 -3 - 2607 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229938.peg.2232 CDS AP013044.1 2609357 2609007 -2 - 351 hypothetical protein - none -
fig|6666666.229938.peg.2233 CDS AP013044.1 2609628 2610212 3 + 585 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229938.peg.2234 CDS AP013044.1 2610245 2610961 2 + 717 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase
fig|6666666.229938.peg.2235 CDS AP013044.1 2610976 2611713 1 + 738 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) Peptidyl-prolyl cis-trans isomerase;
Potassium homeostasis
fig|6666666.229938.peg.2236 CDS AP013044.1 2611911 2613350 3 + 1440 Transglutaminase-like enzymes, putative cysteine proteases - none -
fig|6666666.229938.peg.2237 CDS AP013044.1 2613463 2614353 1 + 891 Hydroxypyruvate isomerase (EC 5.3.1.22) - none -
fig|6666666.229938.peg.2238 CDS AP013044.1 2614426 2614686 1 + 261 hypothetical protein - none -
fig|6666666.229938.peg.2239 CDS AP013044.1 2614743 2614865 3 + 123 hypothetical protein - none -
fig|6666666.229938.peg.2240 CDS AP013044.1 2615376 2614852 -3 - 525 hypothetical protein - none -
fig|6666666.229938.peg.2241 CDS AP013044.1 2616598 2615363 -1 - 1236 hypothetical protein - none -
fig|6666666.229938.peg.2242 CDS AP013044.1 2616983 2616654 -2 - 330 hypothetical protein - none -
fig|6666666.229938.peg.2243 CDS AP013044.1 2617060 2618454 1 + 1395 IS1478 transposase - none -
fig|6666666.229938.peg.2244 CDS AP013044.1 2620315 2618627 -1 - 1689 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.2245 CDS AP013044.1 2623290 2620336 -3 - 2955 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.229938.peg.2246 CDS AP013044.1 2623498 2623352 -1 - 147 hypothetical protein - none -
fig|6666666.229938.peg.2247 CDS AP013044.1 2623542 2623664 3 + 123 hypothetical protein - none -
fig|6666666.229938.peg.2248 CDS AP013044.1 2624051 2623740 -2 - 312 conserved hypothetical protein, putative membrane protein - none -
fig|6666666.229938.peg.2249 CDS AP013044.1 2626378 2624066 -1 - 2313 TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.2250 CDS AP013044.1 2627814 2626693 -3 - 1122 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins Ton and Tol transport systems
fig|6666666.229938.peg.2251 CDS AP013044.1 2629601 2628255 -2 - 1347 Dihydroorotase (EC 3.5.2.3) De Novo Pyrimidine Synthesis
fig|6666666.229938.peg.2252 CDS AP013044.1 2630380 2629598 -1 - 783 Dolichol-phosphate mannosyltransferase (EC 2.4.1.83) - none -
fig|6666666.229938.peg.2253 CDS AP013044.1 2632047 2630503 -3 - 1545 COG1649 predicted glycoside hydrolase - none -
fig|6666666.229938.peg.2254 CDS AP013044.1 2633134 2632091 -1 - 1044 NAD-dependent epimerase/dehydratase family protein - none -
fig|6666666.229938.peg.2255 CDS AP013044.1 2633222 2633344 2 + 123 hypothetical protein - none -
fig|6666666.229938.peg.2256 CDS AP013044.1 2634048 2633386 -3 - 663 hypothetical protein - none -
fig|6666666.229938.peg.2257 CDS AP013044.1 2635700 2634075 -2 - 1626 LysM-repeat proteins and domains - none -
fig|6666666.229938.peg.2258 CDS AP013044.1 2636020 2635883 -1 - 138 hypothetical protein - none -
fig|6666666.229938.peg.2259 CDS AP013044.1 2636123 2637349 2 + 1227 hypothetical protein - none -
fig|6666666.229938.peg.2260 CDS AP013044.1 2637349 2638323 1 + 975 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) Murein Hydrolases
fig|6666666.229938.peg.2261 CDS AP013044.1 2638356 2641229 3 + 2874 Excinuclease ABC subunit A DNA repair, UvrABC system
fig|6666666.229938.peg.2262 CDS AP013044.1 2641234 2641452 1 + 219 FIG00899317: hypothetical protein - none -
fig|6666666.229938.peg.2263 CDS AP013044.1 2641493 2642128 2 + 636 FIG000605: protein co-occurring with transport systems (COG1739) Transport system clustering with HemG
fig|6666666.229938.peg.2264 CDS AP013044.1 2642485 2642201 -1 - 285 hypothetical protein - none -
fig|6666666.229938.peg.2265 CDS AP013044.1 2642726 2642595 -2 - 132 hypothetical protein - none -
fig|6666666.229938.peg.2266 CDS AP013044.1 2642774 2643952 2 + 1179 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229938.peg.2267 CDS AP013044.1 2643949 2645640 1 + 1692 Alkaline phosphatase (EC 3.1.3.1) Phosphate metabolism
fig|6666666.229938.peg.2268 CDS AP013044.1 2647926 2646526 -3 - 1401 Gll1663 protein - none -
fig|6666666.229938.peg.2269 CDS AP013044.1 2648773 2648369 -1 - 405 hypothetical protein - none -
fig|6666666.229938.peg.2270 CDS AP013044.1 2652076 2649701 -1 - 2376 Zinc metalloproteinase precursor (EC 3.4.24.29) / aureolysin Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.229938.peg.2271 CDS AP013044.1 2652531 2652073 -3 - 459 hypothetical protein - none -
fig|6666666.229938.peg.2272 CDS AP013044.1 2654710 2653085 -1 - 1626 Zinc metalloproteinase precursor (EC 3.4.24.29) / aureolysin Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.229938.peg.2273 CDS AP013044.1 2656050 2654719 -3 - 1332 Zinc metalloproteinase precursor (EC 3.4.24.29) / aureolysin Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.229938.peg.2274 CDS AP013044.1 2658774 2657554 -3 - 1221 Zinc metalloproteinase precursor (EC 3.4.24.29) / aureolysin Listeria Pathogenicity Island LIPI-1 extended
fig|6666666.229938.peg.2275 CDS AP013044.1 2659317 2659463 3 + 147 hypothetical protein - none -
fig|6666666.229938.peg.2276 CDS AP013044.1 2661069 2659525 -3 - 1545 Lysyl endopeptidase (EC 3.4.21.50) ## LysXxx (including Pro) Serine endopeptidase (EC 3.4.21.-)
fig|6666666.229938.peg.2277 CDS AP013044.1 2661179 2661066 -2 - 114 hypothetical protein - none -
fig|6666666.229938.peg.2278 CDS AP013044.1 2665605 2661976 -3 - 3630 Beta-mannosidase (EC 3.2.1.25) Mannose Metabolism
fig|6666666.229938.peg.2279 CDS AP013044.1 2665715 2665602 -2 - 114 hypothetical protein - none -
fig|6666666.229938.peg.2280 CDS AP013044.1 2666252 2665749 -2 - 504 Transcriptional activator RfaH Transcription factors bacterial
fig|6666666.229938.peg.2281 CDS AP013044.1 2667730 2666249 -1 - 1482 COG1649 predicted glycoside hydrolase - none -
fig|6666666.229938.peg.2282 CDS AP013044.1 2668532 2667738 -2 - 795 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) - none -
fig|6666666.229938.peg.2283 CDS AP013044.1 2669472 2668534 -3 - 939 Thioredoxin reductase (EC 1.8.1.9) Thioredoxin-disulfide reductase
fig|6666666.229938.peg.2284 CDS AP013044.1 2670128 2669514 -2 - 615 hypothetical protein - none -
fig|6666666.229938.peg.2285 CDS AP013044.1 2672602 2670155 -1 - 2448 Cell division protein FtsK Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial RNA-metabolizing Zn-dependent hydrolases
fig|6666666.229938.peg.2286 CDS AP013044.1 2672888 2674657 2 + 1770 Aspartyl-tRNA synthetase (EC 6.1.1.12) tRNA aminoacylation, Asp and Asn
fig|6666666.229938.peg.2287 CDS AP013044.1 2674672 2675769 1 + 1098 FIG137478: Hypothetical protein YbgI - none -
fig|6666666.229938.peg.2288 CDS AP013044.1 2675781 2676770 3 + 990 FIG137478: Hypothetical protein tRNA modification Bacteria
fig|6666666.229938.peg.2289 CDS AP013044.1 2676813 2678165 3 + 1353 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) Cell division-ribosomal stress proteins cluster;
Folate biosynthesis cluster;
tRNA modification Bacteria;
tRNA processing
fig|6666666.229938.peg.2290 CDS AP013044.1 2678389 2680365 1 + 1977 Transcription termination factor Rho Transcription factors bacterial
fig|6666666.229938.peg.2291 CDS AP013044.1 2680495 2680623 1 + 129 hypothetical protein - none -
fig|6666666.229938.peg.2292 CDS AP013044.1 2680627 2681193 1 + 567 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) Thioredoxin-disulfide reductase
fig|6666666.229938.peg.2293 CDS AP013044.1 2681425 2682117 1 + 693 hypothetical protein - none -
fig|6666666.229938.peg.2294 CDS AP013044.1 2682114 2682716 3 + 603 LuxR family transcriptional regulator - none -
fig|6666666.229938.peg.2295 CDS AP013044.1 2682831 2684507 3 + 1677 Predicted cobalt transporter in Bacteroides_Porphyromonas - none -
fig|6666666.229938.peg.2296 CDS AP013044.1 2686213 2684654 -1 - 1560 hypothetical protein - none -
fig|6666666.229938.peg.2297 CDS AP013044.1 2686321 2686473 1 + 153 hypothetical protein - none -
fig|6666666.229938.peg.2298 CDS AP013044.1 2686916 2686485 -2 - 432 hypothetical protein - none -
fig|6666666.229938.peg.2299 CDS AP013044.1 2687167 2686934 -1 - 234 hypothetical protein - none -
fig|6666666.229938.peg.2300 CDS AP013044.1 2688711 2687317 -3 - 1395 IS1478 transposase - none -
fig|6666666.229938.peg.2301 CDS AP013044.1 2690851 2688947 -1 - 1905 Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) Na+ translocating decarboxylases and related biotin-dependent enzymes;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229938.peg.2302 CDS AP013044.1 2692658 2691099 -2 - 1560 L-lactate permease Lactate utilization
fig|6666666.229938.peg.2303 CDS AP013044.1 2693282 2692701 -2 - 582 Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518 Lactate utilization
fig|6666666.229938.peg.2304 CDS AP013044.1 2694670 2693279 -1 - 1392 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Lactate utilization
fig|6666666.229938.peg.2305 CDS AP013044.1 2695410 2694667 -3 - 744 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Lactate utilization
fig|6666666.229938.peg.2306 CDS AP013044.1 2696748 2695459 -3 - 1290 hypothetical protein - none -
fig|6666666.229938.peg.2307 CDS AP013044.1 2697315 2697737 3 + 423 Nudix hydrolase family protein - none -
fig|6666666.229938.peg.2308 CDS AP013044.1 2697793 2698218 1 + 426 Amino acid-binding ACT Aromatic amino acid interconversions with aryl acids
fig|6666666.229938.peg.2309 CDS AP013044.1 2698265 2699092 2 + 828 lipoprotein protein, putative - none -
fig|6666666.229938.peg.2310 CDS AP013044.1 2699118 2699456 3 + 339 FIG00936941: hypothetical protein - none -
fig|6666666.229938.peg.2311 CDS AP013044.1 2699456 2699917 2 + 462 FIG00897728: hypothetical protein - none -
fig|6666666.229938.peg.2312 CDS AP013044.1 2699931 2700773 3 + 843 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) - none -
fig|6666666.229938.peg.2313 CDS AP013044.1 2700770 2701453 2 + 684 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase Lipoic acid metabolism;
Lipoic acid synthesis cluster
fig|6666666.229938.peg.2314 CDS AP013044.1 2701930 2701460 -1 - 471 GldH - none -
fig|6666666.229938.peg.2315 CDS AP013044.1 2703278 2701923 -2 - 1356 Signal peptidase-like protein Heat shock dnaK gene cluster extended
fig|6666666.229938.peg.2316 CDS AP013044.1 2704475 2703288 -2 - 1188 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Biotin biosynthesis Experimental
fig|6666666.229938.peg.2317 CDS AP013044.1 2705360 2704599 -2 - 762 tRNA (adenine37-N(6))-methyltransferase TrmN6 (EC 2.1.1.223) RNA methylation
fig|6666666.229938.peg.2318 CDS AP013044.1 2705962 2705417 -1 - 546 hypothetical protein - none -
fig|6666666.229938.peg.2319 CDS AP013044.1 2706119 2707477 2 + 1359 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A - none -
fig|6666666.229938.peg.2320 CDS AP013044.1 2707474 2708736 1 + 1263 S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase - none -
fig|6666666.229938.peg.2321 CDS AP013044.1 2709397 2708816 -1 - 582 hypothetical protein - none -
fig|6666666.229938.peg.2322 CDS AP013044.1 2709551 2710465 2 + 915 hypothetical protein - none -
fig|6666666.229938.peg.2323 CDS AP013044.1 2710486 2710935 1 + 450 Alanyl-tRNA synthetase (EC 6.1.1.7) CBSS-226186.1.peg.3994;
Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229938.peg.2324 CDS AP013044.1 2710936 2711409 1 + 474 Alanyl-tRNA synthetase (EC 6.1.1.7) CBSS-226186.1.peg.3994;
Cluster containing Alanyl-tRNA synthetase;
tRNA aminoacylation, Ala
fig|6666666.229938.peg.2325 CDS AP013044.1 2711713 2713053 1 + 1341 Alpha-L-fucosidase (EC 3.2.1.51) - none -
fig|6666666.229938.peg.2326 CDS AP013044.1 2713326 2714495 3 + 1170 Carbapenem antibiotics biosynthesis protein carD - none -
fig|6666666.229938.peg.2327 CDS AP013044.1 2714497 2715081 1 + 585 G:T/U mismatch-specific uracil/thymine DNA-glycosylase DNA repair, bacterial;
Uracil-DNA glycosylase
fig|6666666.229938.peg.2328 CDS AP013044.1 2715845 2715958 2 + 114 hypothetical protein - none -
fig|6666666.229938.peg.2329 CDS AP013044.1 2715987 2718995 3 + 3009 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.229938.peg.2330 CDS AP013044.1 2719019 2720578 2 + 1560 SusD, outer membrane protein Cellulosome
fig|6666666.229938.peg.2331 CDS AP013044.1 2720728 2721753 1 + 1026 hypothetical protein - none -
fig|6666666.229938.peg.2332 CDS AP013044.1 2721824 2723731 2 + 1908 Methylmalonyl-CoA mutase (EC 5.4.99.2) Propionyl-CoA to Succinyl-CoA Module
fig|6666666.229938.peg.2333 CDS AP013044.1 2723749 2725896 1 + 2148 Methylmalonyl-CoA mutase (EC 5.4.99.2) Propionyl-CoA to Succinyl-CoA Module
fig|6666666.229938.peg.2334 CDS AP013044.1 2726029 2728089 1 + 2061 ABC transporter ATP-binding protein - none -
fig|6666666.229938.peg.2335 CDS AP013044.1 2728329 2728114 -3 - 216 hypothetical protein - none -
fig|6666666.229938.peg.2336 CDS AP013044.1 2729225 2728467 -2 - 759 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) - none -
fig|6666666.229938.peg.2337 CDS AP013044.1 2731239 2729293 -3 - 1947 Inner membrane protein translocase component YidC, long form CTP synthase (EC 6.3.4.2) cluster;
Cell Division Subsystem including YidCD;
RNA modification cluster
fig|6666666.229938.peg.2338 CDS AP013044.1 2732886 2731282 -3 - 1605 CTP synthase (EC 6.3.4.2) CTP synthase (EC 6.3.4.2) cluster
fig|6666666.229938.peg.2339 CDS AP013044.1 2734845 2733118 -3 - 1728 MutS-related protein, family 1 DNA repair, bacterial MutL-MutS system
fig|6666666.229938.peg.2340 CDS AP013044.1 2735146 2736690 1 + 1545 hypothetical protein - none -
fig|6666666.229938.peg.2341 CDS AP013044.1 2736860 2737306 2 + 447 hypothetical protein - none -
fig|6666666.229938.peg.2342 CDS AP013044.1 2737306 2738211 1 + 906 Electron transport complex protein RnfB Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229938.peg.2343 CDS AP013044.1 2738221 2739549 1 + 1329 Electron transport complex protein RnfC Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229938.peg.2344 CDS AP013044.1 2739592 2740548 1 + 957 Electron transport complex protein RnfD Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229938.peg.2345 CDS AP013044.1 2740551 2741174 3 + 624 Electron transport complex protein RnfG Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229938.peg.2346 CDS AP013044.1 2741319 2741191 -3 - 129 hypothetical protein - none -
fig|6666666.229938.peg.2347 CDS AP013044.1 2741207 2741788 2 + 582 Electron transport complex protein RnfE Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229938.peg.2348 CDS AP013044.1 2741806 2742378 1 + 573 Electron transport complex protein RnfA Na(+)-translocating NADH-quinone oxidoreductase and rnf-like group of electron transport complexes
fig|6666666.229938.peg.2349 CDS AP013044.1 2742900 2742406 -3 - 495 hypothetical protein - none -
fig|6666666.229938.peg.2350 CDS AP013044.1 2742952 2743155 1 + 204 hypothetical protein - none -
fig|6666666.229938.peg.2351 CDS AP013044.1 2743435 2743136 -1 - 300 Protein trl - none -
fig|6666666.229938.peg.2352 CDS AP013044.1 2743958 2744086 2 + 129 hypothetical protein - none -
fig|6666666.229938.peg.2353 CDS AP013044.1 2744109 2744726 3 + 618 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229938.peg.2354 CDS AP013044.1 2744707 2745591 1 + 885 GlpG protein (membrane protein of glp regulon) - none -
fig|6666666.229938.peg.2355 CDS AP013044.1 2745594 2746688 3 + 1095 AP endonuclease domain protein - none -
fig|6666666.229938.peg.2356 CDS AP013044.1 2747995 2746706 -1 - 1290 Xanthine/uracil/thiamine/ascorbate permease family protein Purine Utilization
fig|6666666.229938.peg.2357 CDS AP013044.1 2748716 2748024 -2 - 693 hypothetical protein - none -
fig|6666666.229938.peg.2358 CDS AP013044.1 2749424 2748720 -2 - 705 Beta-glucanase - none -
fig|6666666.229938.peg.2359 CDS AP013044.1 2749756 2749529 -1 - 228 hypothetical protein - none -
fig|6666666.229938.peg.2360 CDS AP013044.1 2751350 2749770 -2 - 1581 Mucin-desulfating sulfatase - none -
fig|6666666.229938.peg.2361 CDS AP013044.1 2751414 2751566 3 + 153 hypothetical protein - none -
fig|6666666.229938.peg.2362 CDS AP013044.1 2751620 2752195 2 + 576 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) - none -
fig|6666666.229938.peg.2363 CDS AP013044.1 2752230 2753648 3 + 1419 Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Cobalamin synthesis;
Cobalamin synthesis
fig|6666666.229938.peg.2364 CDS AP013044.1 2753663 2754844 2 + 1182 Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) - none -
fig|6666666.229938.peg.2365 CDS AP013044.1 2754841 2756661 1 + 1821 Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) Cobalamin synthesis;
Cobalamin synthesis
fig|6666666.229938.peg.2366 CDS AP013044.1 2756658 2758466 3 + 1809 Cobalt-precorrin-6x reductase (EC 1.3.1.54) / Cobalt-precorrin-6 synthase, anaerobic Cobalamin synthesis;
Cobalamin synthesis
fig|6666666.229938.peg.2367 CDS AP013044.1 2758624 2760525 1 + 1902 Amidophosphoribosyltransferase (EC 2.4.2.14) De Novo Purine Biosynthesis
fig|6666666.229938.peg.2368 CDS AP013044.1 2760566 2761096 2 + 531 hypothetical protein - none -
fig|6666666.229938.peg.2369 CDS AP013044.1 2761318 2761184 -1 - 135 hypothetical protein - none -
fig|6666666.229938.peg.2370 CDS AP013044.1 2761759 2761466 -1 - 294 FIG00936253: hypothetical protein - none -
fig|6666666.229938.peg.2371 CDS AP013044.1 2761915 2761763 -1 - 153 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.229938.peg.2372 CDS AP013044.1 2764932 2761939 -3 - 2994 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.229938.peg.2373 CDS AP013044.1 2766040 2765000 -1 - 1041 Probable Co/Zn/Cd efflux system membrane fusion protein Cobalt-zinc-cadmium resistance
fig|6666666.229938.peg.2374 CDS AP013044.1 2767538 2766057 -2 - 1482 Outer membrane efflux protein precursor - none -
fig|6666666.229938.peg.2375 CDS AP013044.1 2767685 2768704 2 + 1020 Transcriptional regulator, AraC family - none -
fig|6666666.229938.peg.2376 CDS AP013044.1 2769351 2768899 -3 - 453 hypothetical protein - none -
fig|6666666.229938.peg.2377 CDS AP013044.1 2771271 2769757 -3 - 1515 Di-/tripeptide transporter Proton-dependent Peptide Transporters
fig|6666666.229938.peg.2378 CDS AP013044.1 2772456 2771326 -3 - 1131 FIG00936535: hypothetical protein - none -
fig|6666666.229938.peg.2379 CDS AP013044.1 2772499 2772816 1 + 318 hypothetical protein - none -
fig|6666666.229938.peg.2380 CDS AP013044.1 2773775 2772813 -2 - 963 Ornithine carbamoyltransferase (EC 2.1.3.3) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended;
Arginine Deiminase Pathway;
Arginine and Ornithine Degradation
fig|6666666.229938.peg.2381 CDS AP013044.1 2774000 2774947 2 + 948 putative anti-sigma factor - none -
fig|6666666.229938.peg.2382 CDS AP013044.1 2775070 2778288 1 + 3219 SusC, outer membrane protein involved in starch binding Cellulosome
fig|6666666.229938.peg.2383 CDS AP013044.1 2778300 2780045 3 + 1746 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.2384 CDS AP013044.1 2780094 2781575 3 + 1482 O-Glycosyl hydrolase family 30 - none -
fig|6666666.229938.peg.2385 CDS AP013044.1 2782079 2782813 2 + 735 Hypothetical Nudix-like regulator - none -
fig|6666666.229938.peg.2386 CDS AP013044.1 2782867 2784354 1 + 1488 Xylulose kinase (EC 2.7.1.17) Xylose utilization
fig|6666666.229938.peg.2387 CDS AP013044.1 2784403 2785722 1 + 1320 Xylose isomerase (EC 5.3.1.5) Xylose utilization
fig|6666666.229938.peg.2388 CDS AP013044.1 2785748 2787247 2 + 1500 D-xylose proton-symporter XylE Xylose utilization
fig|6666666.229938.peg.2389 CDS AP013044.1 2787789 2788076 3 + 288 putative anti-sigma factor - none -
fig|6666666.229938.peg.2390 CDS AP013044.1 2788084 2788269 1 + 186 putative anti-sigma factor - none -
fig|6666666.229938.peg.2391 CDS AP013044.1 2788392 2791781 3 + 3390 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.2392 CDS AP013044.1 2791794 2793440 3 + 1647 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.2393 CDS AP013044.1 2793455 2795086 2 + 1632 hypothetical protein - none -
fig|6666666.229938.peg.2394 CDS AP013044.1 2795119 2796534 1 + 1416 conserved hypothetical protein, putative S-layer related protein precursor - none -
fig|6666666.229938.peg.2395 CDS AP013044.1 2796588 2798048 3 + 1461 hypothetical protein - none -
fig|6666666.229938.peg.2396 CDS AP013044.1 2798103 2798357 3 + 255 hypothetical protein - none -
fig|6666666.229938.peg.2397 CDS AP013044.1 2798616 2798464 -3 - 153 hypothetical protein - none -
fig|6666666.229938.peg.2398 CDS AP013044.1 2798951 2798670 -2 - 282 hypothetical protein - none -
fig|6666666.229938.peg.2399 CDS AP013044.1 2799679 2799915 1 + 237 hypothetical protein - none -
fig|6666666.229938.peg.2400 CDS AP013044.1 2800054 2801094 1 + 1041 hypothetical protein - none -
fig|6666666.229938.peg.2401 CDS AP013044.1 2801479 2801228 -1 - 252 hypothetical protein - none -
fig|6666666.229938.peg.2402 CDS AP013044.1 2801635 2801793 1 + 159 hypothetical protein - none -
fig|6666666.229938.peg.2403 CDS AP013044.1 2801896 2802231 1 + 336 HicB protein - none -
fig|6666666.229938.peg.2404 CDS AP013044.1 2802271 2802390 1 + 120 hypothetical protein - none -
fig|6666666.229938.peg.2405 CDS AP013044.1 2802567 2803334 3 + 768 Acetylglutamate kinase (EC 2.7.2.8) Arginine Biosynthesis -- gjo;
Arginine Biosynthesis extended
fig|6666666.229938.peg.2406 CDS AP013044.1 2805171 2803354 -3 - 1818 putative Fe-S oxidoreductase - none -
fig|6666666.229938.peg.2407 CDS AP013044.1 2805971 2805168 -2 - 804 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) A Gammaproteobacteria Cluster Relating to Translation;
Isoprenoid Biosynthesis;
Nonmevalonate Branch of Isoprenoid Biosynthesis
fig|6666666.229938.peg.2408 CDS AP013044.1 2807295 2805976 -3 - 1320 ATP-dependent RNA helicase - none -
fig|6666666.229938.peg.2409 CDS AP013044.1 2808358 2807309 -1 - 1050 Transglycosylase - none -
fig|6666666.229938.peg.2410 CDS AP013044.1 2810470 2808362 -1 - 2109 FIG00936866: hypothetical protein - none -
fig|6666666.229938.peg.2411 CDS AP013044.1 2811081 2810539 -3 - 543 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) - none -
fig|6666666.229938.peg.2412 CDS AP013044.1 2811863 2811102 -2 - 762 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) - none -
fig|6666666.229938.peg.2413 CDS AP013044.1 2812059 2811886 -3 - 174 hypothetical protein - none -
fig|6666666.229938.peg.2414 CDS AP013044.1 2813147 2812071 -2 - 1077 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) - none -
fig|6666666.229938.peg.2415 CDS AP013044.1 2813382 2813152 -3 - 231 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) - none -
fig|6666666.229938.peg.2416 CDS AP013044.1 2813837 2813442 -2 - 396 Sll0543 protein - none -
fig|6666666.229938.peg.2417 CDS AP013044.1 2814458 2813904 -2 - 555 hypothetical protein - none -
fig|6666666.229938.peg.2418 CDS AP013044.1 2815577 2814645 -2 - 933 Integral membrane protein - none -
fig|6666666.229938.peg.2419 CDS AP013044.1 2816691 2815582 -3 - 1110 TPR repeat - none -
fig|6666666.229938.peg.2420 CDS AP013044.1 2818443 2816731 -3 - 1713 Glutaminyl-tRNA synthetase (EC 6.1.1.18) tRNA aminoacylation, Glu and Gln
fig|6666666.229938.peg.2421 CDS AP013044.1 2819700 2818663 -3 - 1038 Thiamine-monophosphate kinase (EC 2.7.4.16) 5-FCL-like protein;
Thiamin biosynthesis
fig|6666666.229938.peg.2422 CDS AP013044.1 2820815 2819715 -2 - 1101 Tetraacyldisaccharide 4@1-kinase (EC 2.7.1.130) - none -
fig|6666666.229938.peg.2423 CDS AP013044.1 2822594 2820834 -2 - 1761 Protease IV (EC 3.4.21.-) - none -
fig|6666666.229938.peg.2424 CDS AP013044.1 2822604 2822762 3 + 159 hypothetical protein - none -
fig|6666666.229938.peg.2425 CDS AP013044.1 2822872 2824221 1 + 1350 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps Multidrug Resistance Efflux Pumps;
Riboflavin, FMN and FAD metabolism in plants
fig|6666666.229938.peg.2426 CDS AP013044.1 2824392 2824228 -3 - 165 hypothetical protein - none -
fig|6666666.229938.peg.2427 CDS AP013044.1 2824617 2824474 -3 - 144 hypothetical protein - none -
fig|6666666.229938.peg.2428 CDS AP013044.1 2826704 2824635 -2 - 2070 Prolyl endopeptidase (EC 3.4.21.26) Serine endopeptidase (EC 3.4.21.-)
fig|6666666.229938.peg.2429 CDS AP013044.1 2830322 2827320 -2 - 3003 Adenylate cyclase (EC 4.6.1.1) cAMP signaling in bacteria
fig|6666666.229938.peg.2430 CDS AP013044.1 2830690 2830956 1 + 267 hypothetical protein - none -
fig|6666666.229938.peg.2431 CDS AP013044.1 2831073 2831411 3 + 339 hypothetical protein - none -
fig|6666666.229938.peg.2432 CDS AP013044.1 2831657 2833006 2 + 1350 hypothetical protein - none -
fig|6666666.229938.peg.2433 CDS AP013044.1 2833422 2835188 3 + 1767 Chitin binding protein Chitin and N-acetylglucosamine utilization
fig|6666666.229938.peg.2434 CDS AP013044.1 2835481 2836656 1 + 1176 similar to (EMBL:AL117211) YPMT1.20C, Yersinia pestis CO-92 hypothetical protein from plasmid pMT1; similar to (EMBL:AF074611) Y1035, Yersinia pestis KIM5 hypothetical protein from plasmid pMT1; blastn and dotplot analyses suggest that an insertion event has taken place at this point as compared to Yersinia pestis pMT1 - none -
fig|6666666.229938.peg.2435 CDS AP013044.1 2836711 2838213 1 + 1503 hypothetical protein - none -
fig|6666666.229938.peg.2436 CDS AP013044.1 2838291 2840324 3 + 2034 similar to (EMBL:AL117211) YPMT1.20C, Yersinia pestis CO-92 hypothetical protein from plasmid pMT1; similar to (EMBL:AF074611) Y1035, Yersinia pestis KIM5 hypothetical protein from plasmid pMT1; blastn and dotplot analyses suggest that an insertion event has taken place at this point as compared to Yersinia pestis pMT1 - none -
fig|6666666.229938.peg.2437 CDS AP013044.1 2840456 2840623 2 + 168 hypothetical protein - none -
fig|6666666.229938.peg.2438 CDS AP013044.1 2840876 2841982 2 + 1107 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) Cellulosome
fig|6666666.229938.peg.2439 CDS AP013044.1 2842099 2845344 1 + 3246 Protein containing cell adhesion domain - none -
fig|6666666.229938.peg.2440 CDS AP013044.1 2848676 2845824 -2 - 2853 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.229938.peg.2441 CDS AP013044.1 2849332 2848694 -1 - 639 Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis Glutathione: Non-redox reactions
fig|6666666.229938.peg.2442 CDS AP013044.1 2849949 2849329 -3 - 621 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB Cell Division Subsystem including YidCD;
RNA methylation;
RNA modification and chromosome partitioning cluster
fig|6666666.229938.peg.2443 CDS AP013044.1 2850801 2849953 -3 - 849 hypothetical protein - none -
fig|6666666.229938.peg.2444 CDS AP013044.1 2851104 2853671 3 + 2568 DNA gyrase subunit A (EC 5.99.1.3) Cell Division Subsystem including YidCD;
DNA gyrase subunits;
DNA replication cluster 1;
DNA topoisomerases, Type II, ATP-dependent;
Resistance to fluoroquinolones
fig|6666666.229938.peg.2445 CDS AP013044.1 2853714 2854916 3 + 1203 TPR domain protein - none -
fig|6666666.229938.peg.2446 CDS AP013044.1 2856153 2855026 -3 - 1128 UspA - none -
fig|6666666.229938.peg.2447 CDS AP013044.1 2856419 2856156 -2 - 264 hypothetical protein - none -
fig|6666666.229938.peg.2448 CDS AP013044.1 2857263 2856556 -3 - 708 putative membrane-associated phospholipid phosphatase - none -
fig|6666666.229938.peg.2449 CDS AP013044.1 2858034 2857270 -3 - 765 BatE Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.229938.peg.2450 CDS AP013044.1 2859881 2858034 -2 - 1848 BatD Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.229938.peg.2451 CDS AP013044.1 2860615 2859875 -1 - 741 BatC Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.229938.peg.2452 CDS AP013044.1 2861645 2860626 -2 - 1020 BatB Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.229938.peg.2453 CDS AP013044.1 2862650 2861661 -2 - 990 BatA (Bacteroides aerotolerance operon) Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.229938.peg.2454 CDS AP013044.1 2863687 2862647 -1 - 1041 FIG00897205: hypothetical protein - none -
fig|6666666.229938.peg.2455 CDS AP013044.1 2864563 2863694 -1 - 870 hypothetical protein PA3071 Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.229938.peg.2456 CDS AP013044.1 2865588 2864593 -3 - 996 MoxR-like ATPase in aerotolerance operon Aerotolerance operon in Bacteroides and potentially orthologous operons in other organisms
fig|6666666.229938.peg.2457 CDS AP013044.1 2867136 2865742 -3 - 1395 putative integration host factor IHF alpha subunit - none -
fig|6666666.229938.peg.2458 CDS AP013044.1 2867419 2867129 -1 - 291 Integration host factor alpha/beta DNA structural proteins, bacterial
fig|6666666.229938.peg.2459 CDS AP013044.1 2868795 2867500 -3 - 1296 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase Methylthiotransferases;
Ribosomal protein S12p Asp methylthiotransferase
fig|6666666.229938.peg.2460 CDS AP013044.1 2869747 2868776 -1 - 972 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) Bacterial Cell Division;
Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229938.peg.2461 CDS AP013044.1 2870100 2871257 3 + 1158 hypothetical protein - none -
fig|6666666.229938.peg.2462 CDS AP013044.1 2871468 2871346 -3 - 123 hypothetical protein - none -
fig|6666666.229938.peg.2463 CDS AP013044.1 2872362 2871787 -3 - 576 hypothetical protein - none -
fig|6666666.229938.peg.2464 CDS AP013044.1 2872472 2872603 2 + 132 hypothetical protein - none -
fig|6666666.229938.peg.2465 CDS AP013044.1 2872715 2872578 -2 - 138 hypothetical protein - none -
fig|6666666.229938.peg.2466 CDS AP013044.1 2872714 2873640 1 + 927 FIG004453: protein YceG like CBSS-323097.3.peg.2594;
Cluster containing Alanyl-tRNA synthetase;
tRNA modification Bacteria
fig|6666666.229938.peg.2467 CDS AP013044.1 2873712 2875304 3 + 1593 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) Aromatic amino acid interconversions with aryl acids;
Indole-pyruvate oxidoreductase complex
fig|6666666.229938.peg.2468 CDS AP013044.1 2875306 2875884 1 + 579 Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8) Aromatic amino acid interconversions with aryl acids;
Indole-pyruvate oxidoreductase complex
fig|6666666.229938.peg.2469 CDS AP013044.1 2876380 2876063 -1 - 318 hypothetical protein - none -
fig|6666666.229938.peg.2470 CDS AP013044.1 2878355 2877330 -2 - 1026 DNA polymerase III delta subunit (EC 2.7.7.7) - none -
fig|6666666.229938.peg.2471 CDS AP013044.1 2879191 2878367 -1 - 825 AMP nucleosidase (EC 3.2.2.4) Purine conversions
fig|6666666.229938.peg.2472 CDS AP013044.1 2880438 2879701 -3 - 738 hypothetical protein - none -
fig|6666666.229938.peg.2473 CDS AP013044.1 2881438 2880554 -1 - 885 Xylanase Xylose utilization
fig|6666666.229938.peg.2474 CDS AP013044.1 2883092 2881518 -2 - 1575 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) Bacterial Cell Division;
CBSS-354.1.peg.2917;
RNA processing and degradation, bacterial
fig|6666666.229938.peg.2475 CDS AP013044.1 2883626 2883303 -2 - 324 DNA-binding protein HU DNA structural proteins, bacterial
fig|6666666.229938.peg.2476 CDS AP013044.1 2883777 2884895 3 + 1119 A/G-specific adenine glycosylase (EC 3.2.2.-) DNA repair, bacterial
fig|6666666.229938.peg.2477 CDS AP013044.1 2884988 2885437 2 + 450 Single-stranded DNA-binding protein DNA repair, bacterial;
DNA repair, bacterial RecFOR pathway
fig|6666666.229938.peg.2478 CDS AP013044.1 2885494 2886768 1 + 1275 Magnesium and cobalt efflux protein CorC CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Magnesium transport
fig|6666666.229938.peg.2479 CDS AP013044.1 2886771 2887334 3 + 564 GldD - none -
fig|6666666.229938.peg.2480 CDS AP013044.1 2887337 2887960 2 + 624 Siderophore (Surfactin) biosynthesis regulatory protein - none -
fig|6666666.229938.peg.2481 CDS AP013044.1 2889981 2888353 -3 - 1629 Phage major tail protein - none -
fig|6666666.229938.peg.2482 CDS AP013044.1 2891595 2890609 -3 - 987 hypothetical protein - none -
fig|6666666.229938.peg.2483 CDS AP013044.1 2893150 2891615 -1 - 1536 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.229938.peg.2484 CDS AP013044.1 2896639 2893175 -1 - 3465 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.2485 CDS AP013044.1 2897822 2896842 -2 - 981 putative anti-sigma factor - none -
fig|6666666.229938.peg.2486 CDS AP013044.1 2898443 2897874 -2 - 570 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.2487 CDS AP013044.1 2898717 2899673 3 + 957 L-threonine 3-dehydrogenase (EC 1.1.1.103) Glycine Biosynthesis;
Threonine degradation
fig|6666666.229938.peg.2488 CDS AP013044.1 2899692 2900273 3 + 582 putative membrane-associated phospholipid phosphatase - none -
fig|6666666.229938.peg.2489 CDS AP013044.1 2900291 2901148 2 + 858 PAP2 superfamily protein - none -
fig|6666666.229938.peg.2490 CDS AP013044.1 2901332 2901874 2 + 543 FIG00935504: hypothetical protein - none -
fig|6666666.229938.peg.2491 CDS AP013044.1 2901957 2902073 3 + 117 hypothetical protein - none -
fig|6666666.229938.peg.2492 CDS AP013044.1 2902090 2902452 1 + 363 hypothetical protein - none -
fig|6666666.229938.peg.2493 CDS AP013044.1 2903012 2903149 2 + 138 hypothetical protein - none -
fig|6666666.229938.peg.2494 CDS AP013044.1 2904114 2903113 -3 - 1002 Possible oxidoreductase - none -
fig|6666666.229938.peg.2495 CDS AP013044.1 2905229 2904111 -2 - 1119 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Glycine and Serine Utilization;
Glycine cleavage system
fig|6666666.229938.peg.2496 CDS AP013044.1 2906425 2905199 -1 - 1227 Tripeptide aminopeptidase (EC 3.4.11.4) - none -
fig|6666666.229938.peg.2497 CDS AP013044.1 2906755 2907795 1 + 1041 Glycosyl transferase - none -
fig|6666666.229938.peg.2498 CDS AP013044.1 2908231 2908965 1 + 735 hypothetical protein - none -
fig|6666666.229938.peg.2499 CDS AP013044.1 2910270 2909659 -3 - 612 Lipoprotein signal peptidase (EC 3.4.23.36) Lipoprotein Biosynthesis;
Signal peptidase
fig|6666666.229938.peg.2500 CDS AP013044.1 2910664 2910284 -1 - 381 DnaK suppressor protein, putative - none -
fig|6666666.229938.peg.2501 CDS AP013044.1 2914184 2910732 -2 - 3453 Isoleucyl-tRNA synthetase (EC 6.1.1.5) tRNA aminoacylation, Ile
fig|6666666.229938.peg.2502 CDS AP013044.1 2914512 2915582 3 + 1071 Fic family protein - none -
fig|6666666.229938.peg.2503 CDS AP013044.1 2916129 2915593 -3 - 537 Lysine decarboxylase family - none -
fig|6666666.229938.peg.2504 CDS AP013044.1 2916240 2916812 3 + 573 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229938.peg.2505 CDS AP013044.1 2918561 2916909 -2 - 1653 hypothetical protein - none -
fig|6666666.229938.peg.2506 CDS AP013044.1 2920169 2918913 -2 - 1257 hypothetical protein - none -
fig|6666666.229938.peg.2507 CDS AP013044.1 2920212 2920370 3 + 159 hypothetical protein - none -
fig|6666666.229938.peg.2508 CDS AP013044.1 2920367 2921632 2 + 1266 UDP-glucose dehydrogenase (EC 1.1.1.22) - none -
fig|6666666.229938.peg.2509 CDS AP013044.1 2922730 2921675 -1 - 1056 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) Mannose Metabolism
fig|6666666.229938.peg.2510 CDS AP013044.1 2923145 2922840 -2 - 306 probable sialidase - none -
fig|6666666.229938.peg.2511 CDS AP013044.1 2923626 2923201 -3 - 426 probable sialidase - none -
fig|6666666.229938.peg.2512 CDS AP013044.1 2926005 2923705 -3 - 2301 Alpha-1,2-mannosidase Mannose Metabolism
fig|6666666.229938.peg.2513 CDS AP013044.1 2926789 2926046 -1 - 744 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) Chorismate Synthesis;
Cluster containing Alanyl-tRNA synthetase;
Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)
fig|6666666.229938.peg.2514 CDS AP013044.1 2927547 2926786 -3 - 762 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) Menaquinone and Phylloquinone Biosynthesis
fig|6666666.229938.peg.2515 CDS AP013044.1 2928501 2927554 -3 - 948 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) De Novo Purine Biosynthesis
fig|6666666.229938.peg.2516 CDS AP013044.1 2929496 2928522 -2 - 975 Phosphate starvation-inducible protein PhoH, predicted ATPase CBSS-56780.10.peg.1536;
CBSS-56780.10.peg.1536;
Glycyl-tRNA synthetase containing cluster;
Phosphate metabolism;
Phosphate metabolism
fig|6666666.229938.peg.2517 CDS AP013044.1 2932244 2929653 -2 - 2592 putative type IIS restriction/modification enzyme - none -
fig|6666666.229938.peg.2518 CDS AP013044.1 2932255 2932383 1 + 129 hypothetical protein - none -
fig|6666666.229938.peg.2519 CDS AP013044.1 2932403 2933782 2 + 1380 Xaa-Pro aminopeptidase (EC 3.4.11.9) Aminopeptidases (EC 3.4.11.-)
fig|6666666.229938.peg.2520 CDS AP013044.1 2934661 2933984 -1 - 678 hypothetical protein - none -
fig|6666666.229938.peg.2521 CDS AP013044.1 2935469 2934786 -2 - 684 hypothetical protein - none -
fig|6666666.229938.peg.2522 CDS AP013044.1 2937068 2935584 -2 - 1485 hypothetical protein - none -
fig|6666666.229938.peg.2523 CDS AP013044.1 2938057 2937146 -1 - 912 Hypothetical Exported Protein - none -
fig|6666666.229938.peg.2524 CDS AP013044.1 2938457 2938098 -2 - 360 hypothetical protein - none -
fig|6666666.229938.peg.2525 CDS AP013044.1 2939361 2938624 -3 - 738 hypothetical protein - none -
fig|6666666.229938.peg.2526 CDS AP013044.1 2939889 2939464 -3 - 426 hypothetical protein - none -
fig|6666666.229938.peg.2527 CDS AP013044.1 2940825 2939932 -3 - 894 hypothetical protein - none -
fig|6666666.229938.peg.2528 CDS AP013044.1 2941045 2942505 1 + 1461 glycoside hydrolase family 30, candidate beta-glycosidase - none -
fig|6666666.229938.peg.2529 CDS AP013044.1 2942521 2945031 1 + 2511 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229938.peg.2530 CDS AP013044.1 2947154 2945016 -2 - 2139 FIG00898328: hypothetical protein - none -
fig|6666666.229938.peg.2531 CDS AP013044.1 2947243 2949030 1 + 1788 Translation elongation factor LepA Heat shock dnaK gene cluster extended;
Translation elongation factors bacterial;
Universal GTPases
fig|6666666.229938.peg.2532 CDS AP013044.1 2949936 2953061 3 + 3126 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.2533 CDS AP013044.1 2953074 2954534 3 + 1461 putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.2534 CDS AP013044.1 2956023 2954617 -3 - 1407 FIG00896539: hypothetical protein - none -
fig|6666666.229938.peg.2535 CDS AP013044.1 2957434 2956016 -1 - 1419 RNA methyltransferase, TrmA family - none -
fig|6666666.229938.peg.2536 CDS AP013044.1 2957608 2960328 1 + 2721 Pyruvate,phosphate dikinase (EC 2.7.9.1) Glycolysis and Gluconeogenesis;
Pyruvate metabolism I: anaplerotic reactions, PEP
fig|6666666.229938.peg.2537 CDS AP013044.1 2960533 2960886 1 + 354 FIG00898324: hypothetical protein - none -
fig|6666666.229938.peg.2538 CDS AP013044.1 2960883 2961542 3 + 660 FIG00897447: hypothetical protein - none -
fig|6666666.229938.peg.2539 CDS AP013044.1 2961668 2961895 2 + 228 hypothetical protein - none -
fig|6666666.229938.peg.2540 CDS AP013044.1 2961892 2962398 1 + 507 FHA domain protein - none -
fig|6666666.229938.peg.2541 CDS AP013044.1 2962418 2963185 2 + 768 Protein serine/threonine phosphatase PrpC, regulation of stationary phase Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229938.peg.2542 CDS AP013044.1 2963266 2965143 1 + 1878 FIG00896902: hypothetical protein - none -
fig|6666666.229938.peg.2543 CDS AP013044.1 2965162 2966100 1 + 939 hypothetical protein - none -
fig|6666666.229938.peg.2544 CDS AP013044.1 2966116 2968269 1 + 2154 hypothetical protein - none -
fig|6666666.229938.peg.2545 CDS AP013044.1 2968773 2971757 3 + 2985 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.229938.peg.2546 CDS AP013044.1 2971771 2973654 1 + 1884 Putative outer membrane protein, probably involved in nutrient binding - none -
fig|6666666.229938.peg.2547 CDS AP013044.1 2974717 2973866 -1 - 852 Acetyltransferase (EC 2.3.1.-) - none -
fig|6666666.229938.peg.2548 CDS AP013044.1 2975625 2974714 -3 - 912 FIG00406100: hypothetical protein - none -
fig|6666666.229938.peg.2549 CDS AP013044.1 2976923 2975733 -2 - 1191 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Glycine Biosynthesis;
Glycine and Serine Utilization
fig|6666666.229938.peg.2550 CDS AP013044.1 2977291 2977812 1 + 522 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.2551 CDS AP013044.1 2977833 2979146 3 + 1314 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.2552 CDS AP013044.1 2979258 2980004 3 + 747 hypothetical protein - none -
fig|6666666.229938.peg.2553 CDS AP013044.1 2980275 2980841 3 + 567 FIG00897895: hypothetical protein - none -
fig|6666666.229938.peg.2554 CDS AP013044.1 2980854 2981318 3 + 465 tmRNA-binding protein SmpB Heat shock dnaK gene cluster extended;
Translation termination factors bacterial
fig|6666666.229938.peg.2555 CDS AP013044.1 2981367 2982281 3 + 915 FIG00897015: hypothetical protein - none -
fig|6666666.229938.peg.2556 CDS AP013044.1 2982286 2982693 1 + 408 Phage protein - none -
fig|6666666.229938.peg.2557 CDS AP013044.1 2982807 2984126 3 + 1320 hypothetical protein - none -
fig|6666666.229938.peg.2558 CDS AP013044.1 2984320 2984985 1 + 666 Inorganic pyrophosphatase (EC 3.6.1.1) Phosphate metabolism
fig|6666666.229938.peg.2559 CDS AP013044.1 2985211 2985801 1 + 591 hypothetical protein - none -
fig|6666666.229938.peg.2560 CDS AP013044.1 2985925 2987088 1 + 1164 sensor histidine kinase - none -
fig|6666666.229938.peg.2561 CDS AP013044.1 2987227 2987832 1 + 606 RNA polymerase ECF-type sigma factor - none -
fig|6666666.229938.peg.2562 CDS AP013044.1 2988209 2988018 -2 - 192 Mobile element protein - none -
fig|6666666.229938.peg.2563 CDS AP013044.1 2988867 2989763 3 + 897 hypothetical protein - none -
fig|6666666.229938.peg.2564 CDS AP013044.1 2989848 2990621 3 + 774 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) RNA methylation;
tRNA modification Bacteria
fig|6666666.229938.peg.2565 CDS AP013044.1 2990618 2991724 2 + 1107 Septum site-determining protein MinD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
Septum site-determining cluster Min
fig|6666666.229938.peg.2566 CDS AP013044.1 2992345 2992662 1 + 318 hypothetical protein - none -
fig|6666666.229938.peg.2567 CDS AP013044.1 2994455 2992752 -2 - 1704 Putative carboxy-terminal processing protease (EC 3.4.21.102) - none -
fig|6666666.229938.peg.2568 CDS AP013044.1 2995491 2994514 -3 - 978 Ribokinase (EC 2.7.1.15) D-ribose utilization;
Deoxyribose and Deoxynucleoside Catabolism
fig|6666666.229938.peg.2569 CDS AP013044.1 2995812 2998817 3 + 3006 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins Ton and Tol transport systems
fig|6666666.229938.peg.2570 CDS AP013044.1 2998868 3000199 2 + 1332 lipoprotein, putative - none -
fig|6666666.229938.peg.2571 CDS AP013044.1 3000251 3001849 2 + 1599 hypothetical protein - none -
fig|6666666.229938.peg.2572 CDS AP013044.1 3002637 3002263 -3 - 375 hypothetical protein - none -
fig|6666666.229938.peg.2573 CDS AP013044.1 3004316 3002796 -2 - 1521 Integral membrane protein - none -
fig|6666666.229938.peg.2574 CDS AP013044.1 3004449 3004303 -3 - 147 hypothetical protein - none -
fig|6666666.229938.peg.2575 CDS AP013044.1 3005111 3004455 -2 - 657 hypothetical protein - none -
fig|6666666.229938.peg.2576 CDS AP013044.1 3005645 3005277 -2 - 369 putative protein-export membrane protein - none -
fig|6666666.229938.peg.2577 CDS AP013044.1 3006382 3005645 -1 - 738 hypothetical protein - none -
fig|6666666.229938.peg.2578 CDS AP013044.1 3006949 3006413 -1 - 537 hypothetical protein - none -
fig|6666666.229938.peg.2579 CDS AP013044.1 3008117 3006936 -2 - 1182 Transcriptional regulator - none -
fig|6666666.229938.peg.2580 CDS AP013044.1 3009058 3008231 -1 - 828 Putative hemolysin - none -
fig|6666666.229938.peg.2581 CDS AP013044.1 3009966 3009055 -3 - 912 FIG00898098: hypothetical protein - none -
fig|6666666.229938.peg.2582 CDS AP013044.1 3010698 3009970 -3 - 729 oxidoreductase, short chain dehydrogenase/reductase family - none -
fig|6666666.229938.peg.2583 CDS AP013044.1 3011222 3010701 -2 - 522 Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39) Rhamnose containing glycans
fig|6666666.229938.peg.2584 CDS AP013044.1 3012658 3011558 -1 - 1101 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) ECSIG4-SIG7;
Pyridoxin (Vitamin B6) Biosynthesis
fig|6666666.229938.peg.2585 CDS AP013044.1 3013697 3012651 -2 - 1047 FIG00898562: hypothetical protein - none -
fig|6666666.229938.peg.2586 CDS AP013044.1 3014847 3013801 -3 - 1047 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) Conserved gene cluster associated with Met-tRNA formyltransferase;
RNA methylation
fig|6666666.229938.peg.2587 CDS AP013044.1 3017153 3014979 -2 - 2175 Peptidyl-prolyl cis-trans isomerase - none -
fig|6666666.229938.peg.2588 CDS AP013044.1 3017820 3017254 -3 - 567 hypothetical protein - none -
fig|6666666.229938.peg.2589 CDS AP013044.1 3019257 3017890 -3 - 1368 TPR domain protein - none -
fig|6666666.229938.peg.2590 CDS AP013044.1 3020631 3019306 -3 - 1326 putative outer membrane protein - none -
fig|6666666.229938.peg.2591 CDS AP013044.1 3020925 3022181 3 + 1257 hypothetical protein - none -
fig|6666666.229938.peg.2592 CDS AP013044.1 3022178 3023764 2 + 1587 Alkaline phosphatase (EC 3.1.3.1); Type I phosphodiesterase/nucleotide pyrophosphatase precursor Phosphate metabolism
fig|6666666.229938.peg.2593 CDS AP013044.1 3023831 3027169 2 + 3339 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) - none -
fig|6666666.229938.peg.2594 CDS AP013044.1 3027255 3031313 3 + 4059 Two-component system sensor histidine kinase/response regulator, hybrid - none -
fig|6666666.229938.peg.2595 CDS AP013044.1 3033437 3031350 -2 - 2088 TPR repeat precursor - none -
fig|6666666.229938.peg.2596 CDS AP013044.1 3033999 3033442 -3 - 558 Peptide deformylase (EC 3.5.1.88) Bacterial RNA-metabolizing Zn-dependent hydrolases;
Conserved gene cluster associated with Met-tRNA formyltransferase;
Translation termination factors bacterial
fig|6666666.229938.peg.2597 CDS AP013044.1 3034433 3034011 -2 - 423 Putative Holliday junction resolvase YqgF - none -
fig|6666666.229938.peg.2598 CDS AP013044.1 3035834 3034437 -2 - 1398 Glycosyltransferase - none -
fig|6666666.229938.peg.2599 CDS AP013044.1 3037501 3036299 -1 - 1203 Mobile element protein - none -
fig|6666666.229938.peg.2600 CDS AP013044.1 3037658 3038986 2 + 1329 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) Bacterial signal recognition particle (SRP);
Universal GTPases
fig|6666666.229938.peg.2601 CDS AP013044.1 3038999 3039907 2 + 909 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 5-FCL-like protein;
One-carbon metabolism by tetrahydropterines;
One-carbon metabolism by tetrahydropterines
fig|6666666.229938.peg.2602 CDS AP013044.1 3041297 3040047 -2 - 1251 ABC transporter, permease protein - none -
fig|6666666.229938.peg.2603 CDS AP013044.1 3042529 3041354 -1 - 1176 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229938.peg.2604 CDS AP013044.1 3042678 3042550 -3 - 129 hypothetical protein - none -
fig|6666666.229938.peg.2605 CDS AP013044.1 3042877 3044235 1 + 1359 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 5-FCL-like protein;
Glycine cleavage system
fig|6666666.229938.peg.2606 CDS AP013044.1 3044238 3045551 3 + 1314 Aspartate aminotransferase (EC 2.6.1.1) Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229938.peg.2607 CDS AP013044.1 3045666 3045833 3 + 168 hypothetical protein - none -
fig|6666666.229938.peg.2608 CDS AP013044.1 3045814 3046260 1 + 447 Transcriptional regulator, ArsR family - none -
fig|6666666.229938.peg.2609 CDS AP013044.1 3047841 3046561 -3 - 1281 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) - none -
fig|6666666.229938.peg.2610 CDS AP013044.1 3049186 3047900 -1 - 1287 membrane protein, putative - none -
fig|6666666.229938.peg.2611 CDS AP013044.1 3052209 3049183 -3 - 3027 DNA primase (EC 2.7.7.-) CBSS-349161.4.peg.2417;
Macromolecular synthesis operon
fig|6666666.229938.peg.2612 CDS AP013044.1 3052720 3052253 -1 - 468 hypothetical protein - none -
fig|6666666.229938.peg.2613 CDS AP013044.1 3053661 3052729 -3 - 933 hypothetical protein - none -
fig|6666666.229938.peg.2614 CDS AP013044.1 3053834 3053679 -2 - 156 hypothetical protein - none -
fig|6666666.229938.peg.2615 CDS AP013044.1 3054643 3053852 -1 - 792 hypothetical protein - none -
fig|6666666.229938.peg.2616 CDS AP013044.1 3055358 3054660 -2 - 699 hypothetical protein - none -
fig|6666666.229938.peg.2617 CDS AP013044.1 3056166 3055444 -3 - 723 hypothetical protein - none -
fig|6666666.229938.peg.2618 CDS AP013044.1 3056762 3056184 -2 - 579 hypothetical protein - none -
fig|6666666.229938.peg.2619 CDS AP013044.1 3057058 3056930 -1 - 129 hypothetical protein - none -
fig|6666666.229938.peg.2620 CDS AP013044.1 3057847 3057059 -1 - 789 hypothetical protein - none -
fig|6666666.229938.peg.2621 CDS AP013044.1 3058564 3057929 -1 - 636 hypothetical protein - none -
fig|6666666.229938.peg.2622 CDS AP013044.1 3059071 3058745 -1 - 327 hypothetical protein - none -
fig|6666666.229938.peg.2623 CDS AP013044.1 3059373 3059071 -3 - 303 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell division-ribosomal stress proteins cluster;
Stationary phase repair cluster
fig|6666666.229938.peg.2624 CDS AP013044.1 3059390 3060652 2 + 1263 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229938.peg.2625 CDS AP013044.1 3060818 3060633 -2 - 186 hypothetical protein - none -
fig|6666666.229938.peg.2626 CDS AP013044.1 3060835 3061254 1 + 420 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DNA processing cluster
fig|6666666.229938.peg.2627 CDS AP013044.1 3063807 3061315 -3 - 2493 ATP-dependent protease La (EC 3.4.21.53) Type I Proteolysis in bacteria, ATP-dependent
fig|6666666.229938.peg.2628 CDS AP013044.1 3063701 3063856 2 + 156 hypothetical protein - none -
fig|6666666.229938.peg.2629 CDS AP013044.1 3066169 3063989 -1 - 2181 Protease II (EC 3.4.21.83) - none -
fig|6666666.229938.peg.2630 CDS AP013044.1 3067048 3066203 -1 - 846 hypothetical protein - none -
fig|6666666.229938.peg.2631 CDS AP013044.1 3069153 3067090 -3 - 2064 Prolyl oligopeptidase family protein - none -
fig|6666666.229938.peg.2632 CDS AP013044.1 3069371 3070066 2 + 696 Septum formation protein Maf Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.229938.peg.2633 CDS AP013044.1 3071125 3070058 -1 - 1068 GDP-L-fucose synthetase (EC 1.1.1.271) - none -
fig|6666666.229938.peg.2634 CDS AP013044.1 3071324 3071190 -2 - 135 hypothetical protein - none -
fig|6666666.229938.peg.2635 CDS AP013044.1 3072677 3071598 -2 - 1080 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) - none -
fig|6666666.229938.peg.2636 CDS AP013044.1 3072808 3072957 1 + 150 hypothetical protein - none -
fig|6666666.229938.peg.2637 CDS AP013044.1 3072960 3073646 3 + 687 LSU ribosomal protein L25p Ribosome LSU bacterial
fig|6666666.229938.peg.2638 CDS AP013044.1 3073740 3074303 3 + 564 Peptidyl-tRNA hydrolase (EC 3.1.1.29) Cell division-ribosomal stress proteins cluster;
Sporulation-associated proteins with broader functions;
Translation termination factors bacterial
fig|6666666.229938.peg.2639 CDS AP013044.1 3074300 3074719 2 + 420 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Cell division-ribosomal stress proteins cluster;
DNA replication cluster 1;
Heat shock dnaK gene cluster extended
fig|6666666.229938.peg.2640 CDS AP013044.1 3077430 3074839 -3 - 2592 FIG00937290: hypothetical protein - none -
fig|6666666.229938.peg.2641 CDS AP013044.1 3077554 3078108 1 + 555 Chromate transport protein - none -
fig|6666666.229938.peg.2642 CDS AP013044.1 3078105 3078638 3 + 534 Chromate transport protein - none -
fig|6666666.229938.peg.2643 CDS AP013044.1 3078681 3079724 3 + 1044 FIG146085: 3@1-to-5@1 oligoribonuclease A, Bacillus type CBSS-138119.3.peg.2719;
RNA processing and degradation, bacterial
fig|6666666.229938.peg.2644 CDS AP013044.1 3080265 3079729 -3 - 537 hypothetical protein - none -
fig|6666666.229938.peg.2645 CDS AP013044.1 3080606 3080361 -2 - 246 hypothetical protein - none -
fig|6666666.229938.peg.2646 CDS AP013044.1 3080809 3081555 1 + 747 hypothetical protein - none -
fig|6666666.229938.peg.2647 CDS AP013044.1 3081518 3082174 2 + 657 hypothetical protein - none -
fig|6666666.229938.peg.2648 CDS AP013044.1 3082648 3082800 1 + 153 hypothetical protein - none -
fig|6666666.229938.peg.2649 CDS AP013044.1 3082766 3083443 2 + 678 Mannosyltransferase (EC 2.4.1.-) - none -
fig|6666666.229938.peg.2650 CDS AP013044.1 3083917 3083696 -1 - 222 Transposase and inactivated derivatives - none -
fig|6666666.229938.peg.2651 CDS AP013044.1 3084176 3085036 2 + 861 Mannosyltransferase (EC 2.4.1.-) - none -
fig|6666666.229938.peg.2652 CDS AP013044.1 3085153 3085707 1 + 555 Signal peptidase I (EC 3.4.21.89) Signal peptidase
fig|6666666.229938.peg.2653 CDS AP013044.1 3085825 3087672 1 + 1848 ABC transporter, ATP-binding protein - none -
fig|6666666.229938.peg.2654 CDS AP013044.1 3087745 3090297 1 + 2553 putative large secreted protein - none -
fig|6666666.229938.peg.2655 CDS AP013044.1 3090364 3091785 1 + 1422 Type I secretion system, outer membrane component LapE - none -
fig|6666666.229938.peg.2656 CDS AP013044.1 3091837 3092610 1 + 774 HlyD family secretion protein - none -
fig|6666666.229938.peg.2657 CDS AP013044.1 3092570 3092830 2 + 261 HlyD family secretion protein - none -
fig|6666666.229938.peg.2658 CDS AP013044.1 3092843 3094021 2 + 1179 ABC-type multidrug transport system, permease component - none -
fig|6666666.229938.peg.2659 CDS AP013044.1 3094033 3095274 1 + 1242 ABC-type multidrug transport system, permease component - none -
fig|6666666.229938.peg.2660 CDS AP013044.1 3095505 3095305 -3 - 201 Transcriptional regulator, PBSX family - none -
fig|6666666.229938.peg.2661 CDS AP013044.1 3096255 3096028 -3 - 228 hypothetical protein - none -
fig|6666666.229938.peg.2662 CDS AP013044.1 3096286 3096849 1 + 564 Protein-export membrane protein SecD (TC 3.A.5.1.1) / Protein-export membrane protein SecF (TC 3.A.5.1.1) CBSS-211586.1.peg.2832;
CBSS-211586.1.peg.2832
fig|6666666.229938.peg.2663 CDS AP013044.1 3096966 3097103 3 + 138 hypothetical protein - none -
fig|6666666.229938.peg.2664 CDS AP013044.1 3097385 3097618 2 + 234 hypothetical protein - none -
fig|6666666.229938.peg.2665 CDS AP013044.1 3097847 3098029 2 + 183 hypothetical protein - none -
fig|6666666.229938.peg.2666 CDS AP013044.1 3098156 3098335 2 + 180 hypothetical protein - none -
fig|6666666.229938.peg.2667 CDS AP013044.1 3101956 3098414 -1 - 3543 Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) Methionine Degradation;
Pyruvate:ferredoxin oxidoreductase
fig|6666666.229938.peg.2668 CDS AP013044.1 3103174 3101996 -1 - 1179 ATPase component BioM of energizing module of biotin ECF transporter - none -
fig|6666666.229938.peg.2669 CDS AP013044.1 3103843 3103340 -1 - 504 hypothetical protein - none -
fig|6666666.229938.peg.2670 CDS AP013044.1 3104946 3103927 -3 - 1020 Branched-chain amino acid aminotransferase (EC 2.6.1.42) Alanine biosynthesis;
Branched-Chain Amino Acid Biosynthesis;
Leucine Biosynthesis
fig|6666666.229938.peg.2671 CDS AP013044.1 3106719 3105256 -3 - 1464 Inner membrane protein YqiK - none -
fig|6666666.229938.peg.2672 CDS AP013044.1 3107118 3106771 -3 - 348 Lactoylglutathione lyase or related lyase - none -
fig|6666666.229938.peg.2673 CDS AP013044.1 3107639 3107151 -2 - 489 hypothetical protein - none -
fig|6666666.229938.peg.2674 CDS AP013044.1 3110388 3107824 -3 - 2565 FIG00407069: hypothetical protein - none -
fig|6666666.229938.peg.2675 CDS AP013044.1 3110549 3112213 2 + 1665 putative membrane protein - none -
fig|6666666.229938.peg.2676 CDS AP013044.1 3112213 3112968 1 + 756 putative bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase - none -
fig|6666666.229938.peg.2677 CDS AP013044.1 3113008 3113865 1 + 858 FIG00939405: hypothetical protein - none -
fig|6666666.229938.peg.2678 CDS AP013044.1 3113865 3114785 3 + 921 FIG00896876: hypothetical protein - none -
fig|6666666.229938.peg.2679 CDS AP013044.1 3114782 3115513 2 + 732 Hydrolase (HAD superfamily) - none -
fig|6666666.229938.peg.2680 CDS AP013044.1 3115574 3115993 2 + 420 hypothetical protein - none -
fig|6666666.229938.peg.2681 CDS AP013044.1 3116069 3117307 2 + 1239 Cation efflux system protein - none -
fig|6666666.229938.peg.2682 CDS AP013044.1 3117321 3120404 3 + 3084 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA Cobalt-zinc-cadmium resistance;
Cobalt-zinc-cadmium resistance
fig|6666666.229938.peg.2683 CDS AP013044.1 3120401 3121582 2 + 1182 Heavy metal RND efflux outer membrane protein, CzcC family Cobalt-zinc-cadmium resistance
fig|6666666.229938.peg.2684 CDS AP013044.1 3121713 3121570 -3 - 144 hypothetical protein - none -
fig|6666666.229938.peg.2685 CDS AP013044.1 3122608 3121748 -1 - 861 FIG00897598: hypothetical protein - none -
fig|6666666.229938.peg.2686 CDS AP013044.1 3123951 3122638 -3 - 1314 Probable secreted glycosyl hydrolase - none -
fig|6666666.229938.peg.2687 CDS AP013044.1 3123994 3124494 1 + 501 hypothetical protein - none -
fig|6666666.229938.peg.2688 CDS AP013044.1 3124510 3125133 1 + 624 hypothetical protein - none -
fig|6666666.229938.peg.2689 CDS AP013044.1 3125161 3125862 1 + 702 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) Heat shock dnaK gene cluster extended;
RNA methylation
fig|6666666.229938.peg.2690 CDS AP013044.1 3126365 3127729 2 + 1365 Ribonuclease BN (EC 3.1.-.-) - none -
fig|6666666.229938.peg.2691 CDS AP013044.1 3127750 3127887 1 + 138 hypothetical protein - none -
fig|6666666.229938.peg.2692 CDS AP013044.1 3127967 3130405 2 + 2439 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) Lysine Biosynthesis DAP Pathway;
Lysine Biosynthesis DAP Pathway, GJO scratch;
Threonine and Homoserine Biosynthesis;
Threonine and Homoserine Biosynthesis
fig|6666666.229938.peg.2693 CDS AP013044.1 3130412 3131617 2 + 1206 Predicted functional analog of homoserine kinase (EC 2.7.1.-) Threonine and Homoserine Biosynthesis
fig|6666666.229938.peg.2694 CDS AP013044.1 3133893 3132235 -3 - 1659 A4orf02 protein - none -
fig|6666666.229938.peg.2695 CDS AP013044.1 3134915 3133923 -2 - 993 COG1242: Predicted Fe-S oxidoreductase - none -
fig|6666666.229938.peg.2696 CDS AP013044.1 3136224 3135328 -3 - 897 putative sodium-dependent transporter - none -
fig|6666666.229938.peg.2697 CDS AP013044.1 3138256 3136268 -1 - 1989 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Chitin and N-acetylglucosamine utilization
fig|6666666.229938.peg.2698 CDS AP013044.1 3138378 3138265 -3 - 114 hypothetical protein - none -
fig|6666666.229938.peg.2699 CDS AP013044.1 3140881 3138419 -1 - 2463 Helicase PriA essential for oriC/DnaA-independent DNA replication Conserved gene cluster associated with Met-tRNA formyltransferase
fig|6666666.229938.peg.2700 CDS AP013044.1 3141510 3140908 -3 - 603 hypothetical protein - none -
fig|6666666.229938.peg.2701 CDS AP013044.1 3142269 3142478 3 + 210 hypothetical protein - none -
fig|6666666.229938.peg.2702 CDS AP013044.1 3142488 3142682 3 + 195 hypothetical protein - none -
fig|6666666.229938.peg.2703 CDS AP013044.1 3142876 3143280 1 + 405 COG2110, Macro domain, possibly ADP-ribose binding module - none -
fig|6666666.229938.peg.2704 CDS AP013044.1 3143271 3143594 3 + 324 NAD-dependent protein deacetylase of SIR2 family Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate;
Redox-dependent regulation of nucleus processes
fig|6666666.229938.peg.2705 CDS AP013044.1 3144262 3144741 1 + 480 FIG039061: hypothetical protein related to heme utilization - none -
fig|6666666.229938.peg.2706 CDS AP013044.1 3144748 3145758 1 + 1011 Aminopeptidase - none -
fig|6666666.229938.peg.2707 CDS AP013044.1 3146011 3146562 1 + 552 hypothetical protein - none -
fig|6666666.229938.peg.2708 CDS AP013044.1 3146591 3147277 2 + 687 putative NADH dehydrogenase/NAD(P)H nitroreductase - none -
fig|6666666.229938.peg.2709 CDS AP013044.1 3149011 3147356 -1 - 1656 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) - none -
fig|6666666.229938.peg.2710 CDS AP013044.1 3149334 3149456 3 + 123 Mobile element protein - none -
fig|6666666.229938.peg.2711 CDS AP013044.1 3149731 3149507 -1 - 225 Transposase - none -
fig|6666666.229938.peg.2712 CDS AP013044.1 3150518 3149733 -2 - 786 Mobile element protein - none -
fig|6666666.229938.peg.2713 CDS AP013044.1 3151080 3150886 -3 - 195 hypothetical protein - none -
fig|6666666.229938.peg.2714 CDS AP013044.1 3152742 3156347 3 + 3606 putative DNA methylase - none -
fig|6666666.229938.peg.2715 CDS AP013044.1 3156501 3157121 3 + 621 Transcriptional regulator, TetR family - none -
fig|6666666.229938.peg.2716 CDS AP013044.1 3157169 3159094 2 + 1926 Biotin synthesis protein BioZ Biotin biosynthesis Experimental
fig|6666666.229938.peg.2717 CDS AP013044.1 3159118 3161370 1 + 2253 membrane protein, putative - none -
fig|6666666.229938.peg.2718 CDS AP013044.1 3161367 3162101 3 + 735 Outer membrane lipoprotein-sorting protein - none -
fig|6666666.229938.peg.2719 CDS AP013044.1 3162113 3163519 2 + 1407 FIG00936125: hypothetical protein - none -
fig|6666666.229938.peg.2720 CDS AP013044.1 3163574 3166003 2 + 2430 hypothetical protein - none -
fig|6666666.229938.peg.2721 CDS AP013044.1 3166014 3166541 3 + 528 hypothetical protein - none -
fig|6666666.229938.peg.2722 CDS AP013044.1 3166626 3167273 3 + 648 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein - none -
fig|6666666.229938.peg.2723 CDS AP013044.1 3168705 3167266 -3 - 1440 ATP-dependent DNA helicase - none -
fig|6666666.229938.peg.2724 CDS AP013044.1 3169782 3168847 -3 - 936 Transposase - none -
fig|6666666.229938.peg.2725 CDS AP013044.1 3170030 3169908 -2 - 123 hypothetical protein - none -
fig|6666666.229938.peg.2726 CDS AP013044.1 3170175 3171500 3 + 1326 ATPase component BioM of energizing module of biotin ECF transporter - none -
fig|6666666.229938.peg.2727 CDS AP013044.1 3171751 3171557 -1 - 195 hypothetical protein - none -
fig|6666666.229938.peg.2728 CDS AP013044.1 3173193 3171748 -3 - 1446 Toprim domain protein CBSS-315749.4.peg.3658
fig|6666666.229938.peg.2729 CDS AP013044.1 3173475 3174362 3 + 888 Mobile element protein - none -
fig|6666666.229938.peg.2730 CDS AP013044.1 3176937 3174613 -3 - 2325 putative TonB-dependent receptor - none -
fig|6666666.229938.peg.2731 CDS AP013044.1 3178343 3176970 -2 - 1374 Arylsulfatase regulator (Fe-S oxidoreductase) - none -
fig|6666666.229938.peg.2732 CDS AP013044.1 3179320 3179523 1 + 204 ISPg6, transposase - none -
fig|6666666.229938.peg.2733 CDS AP013044.1 3180608 3179811 -2 - 798 Putative mobilization protein BF0133 - none -
fig|6666666.229938.peg.2734 CDS AP013044.1 3181556 3180735 -2 - 822 Methyltransferase - none -
fig|6666666.229938.peg.2735 CDS AP013044.1 3182933 3181740 -2 - 1194 hypothetical protein - none -
fig|6666666.229938.peg.2736 CDS AP013044.1 3183285 3182944 -3 - 342 hypothetical protein - none -
fig|6666666.229938.peg.2737 CDS AP013044.1 3183615 3183292 -3 - 324 hypothetical protein - none -
fig|6666666.229938.peg.2738 CDS AP013044.1 3183890 3183621 -2 - 270 hypothetical protein - none -
fig|6666666.229938.peg.2739 CDS AP013044.1 3184144 3183899 -1 - 246 hypothetical protein - none -
fig|6666666.229938.peg.2740 CDS AP013044.1 3187318 3184190 -1 - 3129 Phage-related protein - none -
fig|6666666.229938.peg.2741 CDS AP013044.1 3188139 3187315 -3 - 825 hypothetical protein - none -
fig|6666666.229938.peg.2742 CDS AP013044.1 3191384 3188139 -2 - 3246 massive surface protein MspF - none -
fig|6666666.229938.peg.2743 CDS AP013044.1 3191535 3191395 -3 - 141 hypothetical protein - none -
fig|6666666.229938.peg.2744 CDS AP013044.1 3192101 3191613 -2 - 489 hypothetical protein - none -
fig|6666666.229938.peg.2745 CDS AP013044.1 3192617 3192111 -2 - 507 hypothetical protein - none -
fig|6666666.229938.peg.2746 CDS AP013044.1 3193391 3192894 -2 - 498 hypothetical protein - none -
fig|6666666.229938.peg.2747 CDS AP013044.1 3193918 3193388 -1 - 531 Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) - none -
fig|6666666.229938.peg.2748 CDS AP013044.1 3194441 3194016 -2 - 426 hypothetical protein - none -
fig|6666666.229938.peg.2749 CDS AP013044.1 3195319 3194450 -1 - 870 hypothetical protein - none -
fig|6666666.229938.peg.2750 CDS AP013044.1 3196390 3195512 -1 - 879 Prophage Clp protease-like protein cAMP signaling in bacteria
fig|6666666.229938.peg.2751 CDS AP013044.1 3196796 3197257 2 + 462 hypothetical protein - none -
fig|6666666.229938.peg.2752 CDS AP013044.1 3197254 3198864 1 + 1611 Phage protein - none -
fig|6666666.229938.peg.2753 CDS AP013044.1 3198901 3199320 1 + 420 hypothetical protein - none -
fig|6666666.229938.peg.2754 CDS AP013044.1 3199341 3201902 3 + 2562 Phage (Mu-like) virion morphogenesis protein - none -
fig|6666666.229938.peg.2755 CDS AP013044.1 3202026 3202562 3 + 537 hypothetical protein - none -
fig|6666666.229938.peg.2756 CDS AP013044.1 3202866 3203027 3 + 162 hypothetical protein - none -
fig|6666666.229938.peg.2757 CDS AP013044.1 3203335 3203042 -1 - 294 hypothetical protein - none -
fig|6666666.229938.peg.2758 CDS AP013044.1 3203561 3204100 2 + 540 hypothetical protein - none -
fig|6666666.229938.peg.2759 CDS AP013044.1 3204399 3204154 -3 - 246 hypothetical protein - none -
fig|6666666.229938.peg.2760 CDS AP013044.1 3204589 3204383 -1 - 207 hypothetical protein - none -
fig|6666666.229938.peg.2761 CDS AP013044.1 3205185 3204586 -3 - 600 putative antirepressor protein - none -
fig|6666666.229938.peg.2762 CDS AP013044.1 3205974 3205807 -3 - 168 hypothetical protein - none -
fig|6666666.229938.peg.2763 CDS AP013044.1 3206393 3206100 -2 - 294 hypothetical protein - none -
fig|6666666.229938.peg.2764 CDS AP013044.1 3206938 3206723 -1 - 216 hypothetical protein - none -
fig|6666666.229938.peg.2765 CDS AP013044.1 3207350 3206949 -2 - 402 putative methyltransferase - none -
fig|6666666.229938.peg.2766 CDS AP013044.1 3208540 3208325 -1 - 216 hypothetical protein - none -
fig|6666666.229938.peg.2767 CDS AP013044.1 3208947 3208696 -3 - 252 hypothetical protein - none -
fig|6666666.229938.peg.2768 CDS AP013044.1 3209824 3209042 -1 - 783 FIG00406346: hypothetical protein - none -
fig|6666666.229938.peg.2769 CDS AP013044.1 3210193 3209996 -1 - 198 hypothetical protein - none -
fig|6666666.229938.peg.2770 CDS AP013044.1 3210647 3210198 -2 - 450 hypothetical protein - none -
fig|6666666.229938.peg.2771 CDS AP013044.1 3211247 3210672 -2 - 576 hypothetical protein - none -
fig|6666666.229938.peg.2772 CDS AP013044.1 3212173 3211295 -1 - 879 FIG00409580: hypothetical protein - none -
fig|6666666.229938.peg.2773 CDS AP013044.1 3214015 3212192 -1 - 1824 hypothetical protein - none -
fig|6666666.229938.peg.2774 CDS AP013044.1 3214763 3214473 -2 - 291 hypothetical protein - none -
fig|6666666.229938.peg.2775 CDS AP013044.1 3215053 3214829 -1 - 225 hypothetical protein - none -
fig|6666666.229938.peg.2776 CDS AP013044.1 3215301 3215050 -3 - 252 hypothetical protein - none -
fig|6666666.229938.peg.2777 CDS AP013044.1 3215411 3215298 -2 - 114 hypothetical protein - none -
fig|6666666.229938.peg.2778 CDS AP013044.1 3215670 3215467 -3 - 204 hypothetical protein - none -
fig|6666666.229938.peg.2779 CDS AP013044.1 3215857 3215684 -1 - 174 hypothetical protein - none -
fig|6666666.229938.peg.2780 CDS AP013044.1 3216337 3215864 -1 - 474 hypothetical protein - none -
fig|6666666.229938.peg.2781 CDS AP013044.1 3216536 3217204 2 + 669 hypothetical protein - none -
fig|6666666.229938.peg.2782 CDS AP013044.1 3218947 3217775 -1 - 1173 Putative mobilization protein BF0133 - none -
fig|6666666.229938.peg.2783 CDS AP013044.1 3219320 3218949 -2 - 372 Putative conjugative transposon mobilization protein BF0132 - none -
fig|6666666.229938.peg.2784 CDS AP013044.1 3219325 3219438 1 + 114 hypothetical protein - none -
fig|6666666.229938.peg.2785 CDS AP013044.1 3219494 3220858 2 + 1365 hypothetical protein - none -
fig|6666666.229938.peg.2786 CDS AP013044.1 3221198 3221320 2 + 123 hypothetical protein - none -
fig|6666666.229938.peg.2787 CDS AP013044.1 3222732 3221596 -3 - 1137 Conjugative transposon protein TraN - none -
fig|6666666.229938.peg.2788 CDS AP013044.1 3223619 3222729 -2 - 891 Conjugative transposon protein TraM - none -
fig|6666666.229938.peg.2789 CDS AP013044.1 3224376 3223621 -3 - 756 putative transmembrane protein - none -
fig|6666666.229938.peg.2790 CDS AP013044.1 3225189 3224383 -3 - 807 p5482_13 - none -
fig|6666666.229938.peg.2791 CDS AP013044.1 3225930 3225196 -3 - 735 hypothetical protein - none -
fig|6666666.229938.peg.2792 CDS AP013044.1 3226073 3225927 -2 - 147 hypothetical protein - none -
fig|6666666.229938.peg.2793 CDS AP013044.1 3228956 3226494 -2 - 2463 Conjugative transposon protein TraG - none -
fig|6666666.229938.peg.2794 CDS AP013044.1 3231162 3229702 -3 - 1461 Mobilization protein C - none -
fig|6666666.229938.peg.2795 CDS AP013044.1 3231526 3231323 -1 - 204 hypothetical protein - none -
fig|6666666.229938.peg.2796 CDS AP013044.1 3232304 3231561 -2 - 744 Chromosome (plasmid) partitioning protein ParA Bacterial Cell Division;
Bacterial Cytoskeleton;
Cell Division Subsystem including YidCD;
RNA modification and chromosome partitioning cluster
fig|6666666.229938.peg.2797 CDS AP013044.1 3233489 3232374 -2 - 1116 Mobilization protein B - none -
fig|6666666.229938.peg.2798 CDS AP013044.1 3234105 3233524 -3 - 582 hypothetical protein - none -
fig|6666666.229938.peg.2799 CDS AP013044.1 3234799 3235086 1 + 288 Probable DNA invertase - none -
fig|6666666.229938.peg.2800 CDS AP013044.1 3235214 3235083 -2 - 132 hypothetical protein - none -
fig|6666666.229938.peg.2801 CDS AP013044.1 3236840 3235716 -2 - 1125 hypothetical protein - none -
fig|6666666.229938.peg.2802 CDS AP013044.1 3236967 3236800 -3 - 168 hypothetical protein - none -
fig|6666666.229938.peg.2803 CDS AP013044.1 3237361 3237020 -1 - 342 hypothetical protein - none -
fig|6666666.229938.peg.2804 CDS AP013044.1 3238059 3237640 -3 - 420 hypothetical protein - none -
fig|6666666.229938.peg.2805 CDS AP013044.1 3238431 3238312 -3 - 120 hypothetical protein - none -
fig|6666666.229938.peg.2806 CDS AP013044.1 3238531 3238692 1 + 162 hypothetical protein - none -
fig|6666666.229938.peg.2807 CDS AP013044.1 3238909 3238709 -1 - 201 hypothetical protein - none -
fig|6666666.229938.peg.2808 CDS AP013044.1 3239366 3238890 -2 - 477 hypothetical protein - none -
fig|6666666.229938.peg.2809 CDS AP013044.1 3240203 3239898 -2 - 306 hypothetical protein - none -
fig|6666666.229938.peg.2810 CDS AP013044.1 3240761 3240216 -2 - 546 hypothetical protein - none -
fig|6666666.229938.peg.2811 CDS AP013044.1 3241110 3240802 -3 - 309 Membrane proteins related to metalloendopeptidases - none -
fig|6666666.229938.peg.2812 CDS AP013044.1 3241357 3241476 1 + 120 tetracycline resistance element mobilization regulatory protein rteC - none -
fig|6666666.229938.peg.2813 CDS AP013044.1 3241980 3241564 -3 - 417 hypothetical protein clusted with conjugative transposons, BF0131 - none -
fig|6666666.229938.peg.2814 CDS AP013044.1 3242221 3242096 -1 - 126 hypothetical protein - none -
fig|6666666.229938.peg.2815 CDS AP013044.1 3242646 3243071 3 + 426 Conjugative transposon protein TraB - none -
fig|6666666.229938.peg.2816 CDS AP013044.1 3243668 3244918 2 + 1251 ATPase component BioM of energizing module of biotin ECF transporter - none -
fig|6666666.229938.peg.2817 CDS AP013044.1 3244934 3245791 2 + 858 hypothetical protein - none -
fig|6666666.229938.peg.2818 CDS AP013044.1 3245788 3248997 1 + 3210 hypothetical protein - none -
fig|6666666.229938.peg.2819 CDS AP013044.1 3248994 3250100 3 + 1107 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) - none -
fig|6666666.229938.peg.2820 CDS AP013044.1 3250101 3252371 3 + 2271 DNA-repair protein - none -
fig|6666666.229938.peg.2821 CDS AP013044.1 3252973 3252803 -1 - 171 hypothetical protein - none -
fig|6666666.229938.peg.2822 CDS AP013044.1 3253001 3254782 2 + 1782 DNA double-strand break repair Rad50 ATPase Rad50-Mre11 DNA repair cluster
fig|6666666.229938.peg.2823 CDS AP013044.1 3254789 3255364 2 + 576 hypothetical protein - none -
fig|6666666.229938.peg.2824 CDS AP013044.1 3257033 3255849 -2 - 1185 transposase - none -
fig|6666666.229938.peg.2825 CDS AP013044.1 3257494 3257610 1 + 117 hypothetical protein - none -
fig|6666666.229938.peg.2826 CDS AP013044.1 3257835 3259844 3 + 2010 Outer membrane vitamin B12 receptor BtuB - none -
fig|6666666.229938.peg.2827 CDS AP013044.1 3259881 3260981 3 + 1101 FIG00897452: hypothetical protein - none -
fig|6666666.229938.peg.2828 CDS AP013044.1 3261004 3262143 1 + 1140 Vitamin B12 ABC transporter, B12-binding component BtuF - none -
fig|6666666.229938.peg.2829 CDS AP013044.1 3264857 3262146 -2 - 2712 Lysyl endopeptidase (EC 3.4.21.50) Serine endopeptidase (EC 3.4.21.-)
fig|6666666.229938.peg.2830 CDS AP013044.1 3265208 3265363 2 + 156 LSU ribosomal protein L34p Cell Division Subsystem including YidCD;
RNA modification cluster;
Ribosome LSU bacterial
fig|6666666.229938.peg.2831 CDS AP013044.1 3265511 3266143 2 + 633 hypothetical protein - none -
fig|6666666.229938.peg.2832 CDS AP013044.1 3266134 3267222 1 + 1089 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) RNA pseudouridine syntheses;
Ribosome biogenesis bacterial
fig|6666666.229938.peg.2833 CDS AP013044.1 3267240 3268250 3 + 1011 D-alanine--D-alanine ligase (EC 6.3.2.4) Peptidoglycan biosynthesis--gjo;
cell division cluster containing FtsQ
fig|6666666.229938.peg.2834 CDS AP013044.1 3268290 3269456 3 + 1167 FIG00938859: hypothetical protein - none -
fig|6666666.229938.peg.2835 CDS AP013044.1 3269453 3270103 2 + 651 Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) Oxidative stress
fig|6666666.229938.peg.2836 CDS AP013044.1 3270109 3270720 1 + 612 Fumarylacetoacetate hydrolase family protein Gentisate degradation;
Salicylate and gentisate catabolism
fig|6666666.229938.peg.2837 CDS AP013044.1 3270851 3274165 2 + 3315 FIG00936082: hypothetical protein - none -
fig|6666666.229938.peg.2838 CDS AP013044.1 3274381 3275610 1 + 1230 Mobile element protein - none -
fig|6666666.229938.peg.2839 CDS AP013044.1 3275684 3276757 2 + 1074 hypothetical protein - none -
fig|6666666.229938.peg.2840 CDS AP013044.1 3277136 3280381 2 + 3246 Tricorn protease homolog 1 (EC 3.4.21.-) - none -
fig|6666666.229938.peg.2841 CDS AP013044.1 3280391 3282349 2 + 1959 Beta-galactosidase (EC 3.2.1.23) Galactosylceramide and Sulfatide metabolism;
Lactose and Galactose Uptake and Utilization;
Lactose utilization
fig|6666666.229938.peg.2842 CDS AP013044.1 3283513 3282362 -1 - 1152 putative translation initiation inhibitor - none -
fig|6666666.229938.peg.2843 CDS AP013044.1 3284298 3283510 -3 - 789 Possible hydrolase - none -
fig|6666666.229938.peg.2844 CDS AP013044.1 3284839 3284291 -1 - 549 Acyltransferase - none -
fig|6666666.229938.peg.2845 CDS AP013044.1 3285171 3284872 -3 - 300 hypothetical protein - none -
fig|6666666.229938.peg.2846 CDS AP013044.1 3285324 3286979 3 + 1656 Glycogen - none -
fig|6666666.229938.peg.2847 CDS AP013044.1 3287678 3286998 -2 - 681 hypothetical protein - none -
fig|6666666.229938.peg.2848 CDS AP013044.1 3288158 3290722 2 + 2565 Glycogen phosphorylase (EC 2.4.1.1) Glycogen metabolism;
Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.2849 CDS AP013044.1 3290835 3291458 3 + 624 FIG00896426: hypothetical protein - none -
fig|6666666.229938.peg.2850 CDS AP013044.1 3291477 3292289 3 + 813 D-mannonate oxidoreductase (EC 1.1.1.57) D-Galacturonate and D-Glucuronate Utilization
fig|6666666.229938.peg.2851 CDS AP013044.1 3292323 3293390 3 + 1068 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) D-Galacturonate and D-Glucuronate Utilization;
Entner-Doudoroff Pathway
fig|6666666.229938.peg.2852 CDS AP013044.1 3293429 3294700 2 + 1272 Novel D-mannonate dehydrogenase (EC 1.1.1.57) - none -
fig|6666666.229938.peg.2853 CDS AP013044.1 3295057 3294722 -1 - 336 hypothetical protein - none -
fig|6666666.229938.peg.2854 CDS AP013044.1 3295918 3295187 -1 - 732 UPF0246 protein YaaA - none -
fig|6666666.229938.peg.2855 CDS AP013044.1 3296742 3296927 3 + 186 hypothetical protein - none -
fig|6666666.229938.peg.2856 CDS AP013044.1 3296920 3298140 1 + 1221 Putative ATP-dependent helicase - none -
fig|6666666.229938.peg.2857 CDS AP013044.1 3298202 3301405 2 + 3204 TonB family protein / TonB-dependent receptor Ton and Tol transport systems
fig|6666666.229938.peg.2858 CDS AP013044.1 3301439 3303079 2 + 1641 putative outer membrane protein probably involved in nutrient binding - none -
fig|6666666.229938.peg.2859 CDS AP013044.1 3307166 3307026 -2 - 141 hypothetical protein - none -
fig|6666666.229938.peg.2860 CDS AP013044.1 3311760 3309304 -3 - 2457 putative ferric aerobactin receptor - none -
fig|6666666.229938.peg.2861 CDS AP013044.1 3312342 3311827 -3 - 516 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) - none -
fig|6666666.229938.peg.2862 CDS AP013044.1 3313112 3312348 -2 - 765 FIG137884: hypothetical protein Coenzyme A Biosynthesis cluster
fig|6666666.229938.peg.2863 CDS AP013044.1 3313672 3313109 -1 - 564 Nitroreductase family protein - none -
fig|6666666.229938.peg.2864 CDS AP013044.1 3315062 3313974 -2 - 1089 MdsC protein - none -
fig|6666666.229938.peg.2865 CDS AP013044.1 3315395 3315141 -2 - 255 LSU ribosomal protein L31p Ribosome LSU bacterial
fig|6666666.229938.peg.2866 CDS AP013044.1 3315553 3316614 1 + 1062 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) Glycolysis and Gluconeogenesis
fig|6666666.229938.peg.2867 CDS AP013044.1 3316808 3318178 2 + 1371 DNA repair protein RadA DNA repair, bacterial;
Proteolysis in bacteria, ATP-dependent
fig|6666666.229938.peg.2868 CDS AP013044.1 3318181 3318540 1 + 360 Uncharacterized protein MJ1379 - none -
fig|6666666.229938.peg.2869 CDS AP013044.1 3318524 3318868 2 + 345 FIG00898898: hypothetical protein - none -
fig|6666666.229938.peg.2870 CDS AP013044.1 3319164 3320303 3 + 1140 hypothetical protein - none -
fig|6666666.229938.peg.2871 CDS AP013044.1 3320389 3321975 1 + 1587 NAD-utilizing dehydrogenases - none -
fig|6666666.229938.peg.2872 CDS AP013044.1 3322151 3321966 -2 - 186 hypothetical protein - none -
fig|6666666.229938.peg.2873 CDS AP013044.1 3322318 3322172 -1 - 147 hypothetical protein - none -
fig|6666666.229938.peg.2874 CDS AP013044.1 3323420 3322842 -2 - 579 Maltose O-acetyltransferase (EC 2.3.1.79) Maltose and Maltodextrin Utilization
fig|6666666.229938.peg.2875 CDS AP013044.1 3324600 3323410 -3 - 1191 LSU m5C1962 methyltransferase RlmI RNA methylation;
Ribosome biogenesis bacterial
fig|6666666.229938.peg.2876 CDS AP013044.1 3325193 3324597 -2 - 597 3@1-5@1 exonuclease domain protein - none -
fig|6666666.229938.peg.2877 CDS AP013044.1 3325729 3325190 -1 - 540 FIG00898259: hypothetical protein - none -
fig|6666666.229938.peg.2878 CDS AP013044.1 3326615 3325734 -2 - 882 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) - none -
fig|6666666.229938.peg.2879 CDS AP013044.1 3326746 3326943 1 + 198 Twin-arginine translocation protein TatA Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229938.peg.2880 CDS AP013044.1 3327100 3327810 1 + 711 Twin-arginine translocation protein TatC Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related;
Twin-arginine translocation system
fig|6666666.229938.peg.2881 CDS AP013044.1 3327815 3330241 2 + 2427 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) - none -
fig|6666666.229938.peg.2882 CDS AP013044.1 3330338 3331873 2 + 1536 Replicative DNA helicase (EC 3.6.1.-) - none -
fig|6666666.229938.peg.2883 CDS AP013044.1 3332455 3331892 -1 - 564 hypothetical protein - none -
fig|6666666.229938.peg.2884 CDS AP013044.1 3334339 3332576 -1 - 1764 ABC transporter ATP-binding protein - none -
fig|6666666.229938.peg.2885 CDS AP013044.1 3334510 3336033 1 + 1524 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 5-FCL-like protein;
De Novo Purine Biosynthesis;
De Novo Purine Biosynthesis
fig|6666666.229938.peg.2886 CDS AP013044.1 3336071 3337090 2 + 1020 Rod shape-determining protein MreB Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster
fig|6666666.229938.peg.2887 CDS AP013044.1 3337163 3338014 2 + 852 Rod shape-determining protein MreC Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.229938.peg.2888 CDS AP013044.1 3338007 3338525 3 + 519 Rod shape-determining protein MreD Bacterial Cell Division;
Bacterial Cytoskeleton;
Bacterial cell division cluster;
CBSS-354.1.peg.2917
fig|6666666.229938.peg.2889 CDS AP013044.1 3338512 3340374 1 + 1863 Penicillin-binding protein 2 (PBP-2) 16S rRNA modification within P site of ribosome;
Bacterial cell division cluster;
CBSS-83331.1.peg.3039
fig|6666666.229938.peg.2890 CDS AP013044.1 3340364 3341809 2 + 1446 Rod shape-determining protein RodA Bacterial Cytoskeleton;
Bacterial cell division cluster
fig|6666666.229938.peg.2891 CDS AP013044.1 3341864 3343696 2 + 1833 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) tRNA aminoacylation, Lys
fig|6666666.229938.peg.2892 CDS AP013044.1 3343728 3344726 3 + 999 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) Glycerolipid and Glycerophospholipid Metabolism in Bacteria
fig|6666666.229938.peg.2893 CDS AP013044.1 3344768 3346114 2 + 1347 Glucose-6-phosphate isomerase (EC 5.3.1.9) Glycolysis and Gluconeogenesis
fig|6666666.229938.peg.2894 CDS AP013044.1 3347748 3346225 -3 - 1524 FIG00896511: hypothetical protein - none -
fig|6666666.229938.peg.2895 CDS AP013044.1 3347867 3348223 2 + 357 SSU ribosomal protein S6p Ribosome SSU bacterial
fig|6666666.229938.peg.2896 CDS AP013044.1 3348226 3348510 1 + 285 SSU ribosomal protein S18p Ribosome SSU bacterial
fig|6666666.229938.peg.2897 CDS AP013044.1 3348531 3348977 3 + 447 LSU ribosomal protein L9p Ribosome LSU bacterial
fig|6666666.229938.peg.2898 CDS AP013044.1 3349083 3350225 3 + 1143 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) Murein Hydrolases;
Recycling of Peptidoglycan Amino Acids
fig|6666666.229938.rna.1 RNA AP013044.1 125313 125241 -3 - 73 tRNA-Phe-GAA tRNAs
fig|6666666.229938.rna.2 RNA AP013044.1 253387 253459 1 + 73 tRNA-Gly-GCC tRNAs
fig|6666666.229938.rna.3 RNA AP013044.1 253477 253562 1 + 86 tRNA-Leu-TAA - none -
fig|6666666.229938.rna.4 RNA AP013044.1 285904 285821 -1 - 84 tRNA-Leu-GAG tRNAs
fig|6666666.229938.rna.5 RNA AP013044.1 285998 285917 -2 - 82 tRNA-Leu-CAG tRNAs
fig|6666666.229938.rna.6 RNA AP013044.1 286195 286123 -1 - 73 tRNA-Gly-GCC tRNAs
fig|6666666.229938.rna.7 RNA AP013044.1 288791 288865 2 + 75 tRNA-Pro-TGG - none -
fig|6666666.229938.rna.8 RNA AP013044.1 410943 410870 -3 - 74 tRNA-Pro-CGG tRNAs
fig|6666666.229938.rna.9 RNA AP013044.1 502996 502926 -1 - 71 tRNA-Gln-TTG - none -
fig|6666666.229938.rna.10 RNA AP013044.1 688721 688649 -2 - 73 tRNA-Gly-TCC - none -
fig|6666666.229938.rna.11 RNA AP013044.1 688869 688787 -3 - 83 tRNA-Tyr-GTA - none -
fig|6666666.229938.rna.12 RNA AP013044.1 696935 696825 -2 - 111 5S RNA - none -
fig|6666666.229938.rna.13 RNA AP013044.1 699990 697084 -3 - 2907 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229938.rna.14 RNA AP013044.1 700338 700265 -3 - 74 tRNA-Ala-TGC - none -
fig|6666666.229938.rna.15 RNA AP013044.1 700494 700421 -3 - 74 tRNA-Ile-GAT - none -
fig|6666666.229938.rna.16 RNA AP013044.1 702234 700718 -3 - 1517 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -
fig|6666666.229938.rna.17 RNA AP013044.1 708693 708619 -3 - 75 tRNA-Val-TAC - none -
fig|6666666.229938.rna.18 RNA AP013044.1 783958 784031 1 + 74 tRNA-Met-CAT - none -
fig|6666666.229938.rna.19 RNA AP013044.1 812985 812912 -3 - 74 tRNA-Met-CAT - none -
fig|6666666.229938.rna.20 RNA AP013044.1 912154 912081 -1 - 74 tRNA-Arg-TCT - none -
fig|6666666.229938.rna.21 RNA AP013044.1 1017131 1017218 2 + 88 tRNA-Ser-GGA tRNAs
fig|6666666.229938.rna.22 RNA AP013044.1 1153824 1153896 3 + 73 tRNA-Lys-TTT - none -
fig|6666666.229938.rna.23 RNA AP013044.1 1198665 1198592 -3 - 74 tRNA-Ala-GGC tRNAs
fig|6666666.229938.rna.24 RNA AP013044.1 1382184 1382265 3 + 82 tRNA-Leu-TAG - none -
fig|6666666.229938.rna.25 RNA AP013044.1 1385185 1385269 1 + 85 tRNA-Ser-TGA - none -
fig|6666666.229938.rna.26 RNA AP013044.1 1696871 1696943 2 + 73 tRNA-Thr-CGT - none -
fig|6666666.229938.rna.27 RNA AP013044.1 1762742 1762671 -2 - 72 tRNA-Glu-CTC - none -
fig|6666666.229938.rna.28 RNA AP013044.1 1763179 1763108 -1 - 72 tRNA-Glu-TTC - none -
fig|6666666.229938.rna.29 RNA AP013044.1 1990450 1990379 -1 - 72 tRNA-Arg-CCT - none -
fig|6666666.229938.rna.30 RNA AP013044.1 1999533 1999606 3 + 74 tRNA-Thr-TGT - none -
fig|6666666.229938.rna.31 RNA AP013044.1 1999726 1999797 1 + 72 tRNA-Thr-GGT - none -
fig|6666666.229938.rna.32 RNA AP013044.1 2001093 2001165 3 + 73 tRNA-Trp-CCA tRNAs
fig|6666666.229938.rna.33 RNA AP013044.1 2041338 2041255 -3 - 84 tRNA-Leu-CAA tRNAs
fig|6666666.229938.rna.34 RNA AP013044.1 2078933 2079005 2 + 73 tRNA-Lys-CTT - none -
fig|6666666.229938.rna.35 RNA AP013044.1 2202474 2202404 -3 - 71 tRNA-Cys-GCA tRNAs
fig|6666666.229938.rna.36 RNA AP013044.1 2208893 2208820 -2 - 74 tRNA-Arg-CCG tRNAs
fig|6666666.229938.rna.37 RNA AP013044.1 2252843 2252914 2 + 72 tRNA-Met-CAT - none -
fig|6666666.229938.rna.38 RNA AP013044.1 2270984 2270911 -2 - 74 tRNA-His-GTG - none -
fig|6666666.229938.rna.39 RNA AP013044.1 2331520 2331594 1 + 75 tRNA-Pro-GGG tRNAs
fig|6666666.229938.rna.40 RNA AP013044.1 2407115 2407188 2 + 74 tRNA-Arg-ACG tRNAs
fig|6666666.229938.rna.41 RNA AP013044.1 2491732 2491802 1 + 71 tRNA-Gln-CTG - none -
fig|6666666.229938.rna.42 RNA AP013044.1 2516491 2516405 -1 - 87 tRNA-Ser-CGA tRNAs
fig|6666666.229938.rna.43 RNA AP013044.1 2715480 2715566 3 + 87 tRNA-Ser-GCT - none -
fig|6666666.229938.rna.44 RNA AP013044.1 2802493 2802421 -1 - 73 tRNA-Gly-CCC tRNAs
fig|6666666.229938.rna.45 RNA AP013044.1 2906616 2906689 3 + 74 tRNA-Thr-TGT - none -
fig|6666666.229938.rna.46 RNA AP013044.1 2995576 2995649 1 + 74 tRNA-Asn-GTT - none -
fig|6666666.229938.rna.47 RNA AP013044.1 3257417 3257344 -2 - 74 tRNA-Asp-GTC - none -
fig|6666666.229938.rna.48 RNA AP013044.1 3303460 3303350 -1 - 111 5S RNA - none -
fig|6666666.229938.rna.49 RNA AP013044.1 3306515 3303609 -2 - 2907 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA - none -
fig|6666666.229938.rna.50 RNA AP013044.1 3306863 3306790 -2 - 74 tRNA-Ala-TGC - none -
fig|6666666.229938.rna.51 RNA AP013044.1 3307019 3306946 -2 - 74 tRNA-Ile-GAT - none -
fig|6666666.229938.rna.52 RNA AP013044.1 3308759 3307243 -2 - 1517 Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA - none -